locus-tag class description CYPRO_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CYPRO_RS00005 PF11638 DnaA N-terminal domain CYPRO_RS00005 PF00308 Bacterial dnaA protein CYPRO_RS00010 PF02152 Dihydroneopterin aldolase CYPRO_RS00020 PF01712 Deoxynucleoside kinase CYPRO_RS00045 PF05698 Bacterial trigger factor protein (TF) C-terminus CYPRO_RS00045 PF05697 Bacterial trigger factor protein (TF) CYPRO_RS00045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYPRO_RS00050 PF00574 Clp protease CYPRO_RS00055 PF06689 ClpX C4-type zinc finger CYPRO_RS00055 PF10431 C-terminal, D2-small domain, of ClpB protein CYPRO_RS00055 PF07724 AAA domain (Cdc48 subfamily) CYPRO_RS00070 PF02401 LytB protein CYPRO_RS00075 PF02463 RecF/RecN/SMC N terminal domain CYPRO_RS00075 PF06470 SMC proteins Flexible Hinge Domain CYPRO_RS00080 PF01765 Ribosome recycling factor CYPRO_RS00085 PF00696 Amino acid kinase family CYPRO_RS00090 PF00889 Elongation factor TS CYPRO_RS00095 PF00318 Ribosomal protein S2 CYPRO_RS00100 PF00380 Ribosomal protein S9/S16 CYPRO_RS00105 PF00572 Ribosomal protein L13 CYPRO_RS00120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYPRO_RS00120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYPRO_RS00125 PF00156 Phosphoribosyl transferase domain CYPRO_RS00130 PF06206 CpeT/CpcT family (DUF1001) CYPRO_RS00140 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CYPRO_RS00140 PF01476 LysM domain CYPRO_RS00150 PF01264 Chorismate synthase CYPRO_RS00160 PF02405 Permease MlaE CYPRO_RS00165 PF00005 ABC transporter CYPRO_RS00180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYPRO_RS00180 PF01872 RibD C-terminal domain CYPRO_RS00185 PF00677 Lumazine binding domain CYPRO_RS00195 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS00195 PF18415 Histidine kinase receptor ArcB trans-membrane domain CYPRO_RS00195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS00195 PF00989 PAS fold CYPRO_RS00195 PF00072 Response regulator receiver domain CYPRO_RS00195 PF01627 Hpt domain CYPRO_RS00235 PF04851 Type III restriction enzyme, res subunit CYPRO_RS00240 PF07669 Eco57I restriction-modification methylase CYPRO_RS00260 PF13784 Fic/DOC family N-terminal CYPRO_RS00260 PF02661 Fic/DOC family CYPRO_RS00270 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CYPRO_RS00270 PF00756 Putative esterase CYPRO_RS00285 PF03109 ABC1 family CYPRO_RS00295 PF03806 AbgT putative transporter family CYPRO_RS00300 PF00672 HAMP domain CYPRO_RS00300 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS00300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS00300 PF00072 Response regulator receiver domain CYPRO_RS00300 PF01627 Hpt domain CYPRO_RS00315 PF00849 RNA pseudouridylate synthase CYPRO_RS00315 PF01479 S4 domain CYPRO_RS00325 PF04079 Segregation and condensation complex subunit ScpB CYPRO_RS00330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYPRO_RS00335 PF18074 Primosomal protein N C-terminal domain CYPRO_RS00335 PF00271 Helicase conserved C-terminal domain CYPRO_RS00335 PF04851 Type III restriction enzyme, res subunit CYPRO_RS00335 PF17764 3′ DNA-binding domain (3′BD) CYPRO_RS00335 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CYPRO_RS00350 PF01513 ATP-NAD kinase CYPRO_RS00355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYPRO_RS00355 PF00056 lactate/malate dehydrogenase, NAD binding domain CYPRO_RS00380 PF04371 Porphyromonas-type peptidyl-arginine deiminase CYPRO_RS00390 PF00756 Putative esterase CYPRO_RS00405 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS00405 PF00593 TonB dependent receptor CYPRO_RS00410 PF07694 5TMR of 5TMR-LYT CYPRO_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS00410 PF06580 Histidine kinase CYPRO_RS00415 PF04397 LytTr DNA-binding domain CYPRO_RS00415 PF00072 Response regulator receiver domain CYPRO_RS00420 PF00672 HAMP domain CYPRO_RS00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS00420 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS00420 PF01627 Hpt domain CYPRO_RS00420 PF00072 Response regulator receiver domain CYPRO_RS00420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS00425 PF13458 Periplasmic binding protein CYPRO_RS00435 PF13335 Magnesium chelatase, subunit ChlI C-terminal CYPRO_RS00435 PF01078 Magnesium chelatase, subunit ChlI CYPRO_RS00450 PF00128 Alpha amylase, catalytic domain CYPRO_RS00450 PF00686 Starch binding domain CYPRO_RS00450 PF02903 Alpha amylase, N-terminal ig-like domain CYPRO_RS00450 PF00128 Alpha amylase, catalytic domain CYPRO_RS00450 PF02903 Alpha amylase, N-terminal ig-like domain CYPRO_RS00450 PF00686 Starch binding domain CYPRO_RS00465 PF01226 Formate/nitrite transporter CYPRO_RS00470 PF12848 ABC transporter CYPRO_RS00470 PF16326 ABC transporter C-terminal domain CYPRO_RS00470 PF00005 ABC transporter CYPRO_RS00475 PF17864 RuvB AAA lid domain CYPRO_RS00475 PF05496 Holliday junction DNA helicase RuvB P-loop domain CYPRO_RS00475 PF05491 RuvB C-terminal winged helix domain CYPRO_RS00495 PF02156 Glycosyl hydrolase family 26 CYPRO_RS00500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYPRO_RS00515 PF01268 Formate--tetrahydrofolate ligase CYPRO_RS00530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYPRO_RS00530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYPRO_RS00535 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYPRO_RS00535 PF02779 Transketolase, pyrimidine binding domain CYPRO_RS00535 PF02780 Transketolase, C-terminal domain CYPRO_RS00540 PF02609 Exonuclease VII small subunit CYPRO_RS00545 PF12631 MnmE helical domain CYPRO_RS00545 PF10396 GTP-binding protein TrmE N-terminus CYPRO_RS00545 PF01926 50S ribosome-binding GTPase CYPRO_RS00555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYPRO_RS00555 PF02770 Acyl-CoA dehydrogenase, middle domain CYPRO_RS00555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYPRO_RS00580 PF00849 RNA pseudouridylate synthase CYPRO_RS00595 PF00593 TonB dependent receptor CYPRO_RS00595 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS00605 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS00605 PF07660 Secretin and TonB N terminus short domain CYPRO_RS00605 PF00593 TonB dependent receptor CYPRO_RS00610 PF01593 Flavin containing amine oxidoreductase CYPRO_RS00630 PF02772 S-adenosylmethionine synthetase, central domain CYPRO_RS00630 PF00438 S-adenosylmethionine synthetase, N-terminal domain CYPRO_RS00630 PF02773 S-adenosylmethionine synthetase, C-terminal domain CYPRO_RS00645 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS00645 PF00593 TonB dependent receptor CYPRO_RS00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS00660 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS00660 PF00072 Response regulator receiver domain CYPRO_RS00660 PF00672 HAMP domain CYPRO_RS00660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS00660 PF01627 Hpt domain CYPRO_RS00680 PF02687 FtsX-like permease family CYPRO_RS00680 PF12704 MacB-like periplasmic core domain CYPRO_RS00695 PF00005 ABC transporter CYPRO_RS00710 PF12704 MacB-like periplasmic core domain CYPRO_RS00710 PF02687 FtsX-like permease family CYPRO_RS00710 PF00005 ABC transporter CYPRO_RS00715 PF12704 MacB-like periplasmic core domain CYPRO_RS00715 PF02687 FtsX-like permease family CYPRO_RS00715 PF00005 ABC transporter CYPRO_RS00725 PF06974 Protein of unknown function (DUF1298) CYPRO_RS00725 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CYPRO_RS00730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYPRO_RS00735 PF00072 Response regulator receiver domain CYPRO_RS00735 PF02954 Bacterial regulatory protein, Fis family CYPRO_RS00735 PF00158 Sigma-54 interaction domain CYPRO_RS00740 PF03553 Na+/H+ antiporter family CYPRO_RS00750 PF05532 CsbD-like CYPRO_RS00765 PF00005 ABC transporter CYPRO_RS00770 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYPRO_RS00775 PF05552 Conserved TM helix CYPRO_RS00775 PF00924 Mechanosensitive ion channel CYPRO_RS00785 PF12833 Helix-turn-helix domain CYPRO_RS00785 PF01965 DJ-1/PfpI family CYPRO_RS00810 PF01381 Helix-turn-helix CYPRO_RS00815 PF17391 Urocanase N-terminal domain CYPRO_RS00815 PF17392 Urocanase C-terminal domain CYPRO_RS00815 PF01175 Urocanase Rossmann-like domain CYPRO_RS00830 PF13784 Fic/DOC family N-terminal CYPRO_RS00830 PF02661 Fic/DOC family CYPRO_RS00850 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS00850 PF07689 KaiB domain CYPRO_RS00870 PF00221 Aromatic amino acid lyase CYPRO_RS00885 PF04389 Peptidase family M28 CYPRO_RS00895 PF00005 ABC transporter CYPRO_RS00895 PF13732 Domain of unknown function (DUF4162) CYPRO_RS00905 PF06580 Histidine kinase CYPRO_RS00905 PF02743 Cache domain CYPRO_RS00905 PF00672 HAMP domain CYPRO_RS00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS00910 PF00072 Response regulator receiver domain CYPRO_RS00910 PF04397 LytTr DNA-binding domain CYPRO_RS00915 PF13173 AAA domain CYPRO_RS00915 PF13635 Domain of unknown function (DUF4143) CYPRO_RS00920 PF01979 Amidohydrolase family CYPRO_RS00925 PF01134 Glucose inhibited division protein A CYPRO_RS00925 PF13932 GidA associated domain CYPRO_RS00930 PF02527 rRNA small subunit methyltransferase G CYPRO_RS00950 PF13520 Amino acid permease CYPRO_RS00955 PF07681 DoxX CYPRO_RS00960 PF01235 Sodium:alanine symporter family CYPRO_RS00965 PF06827 Zinc finger found in FPG and IleRS CYPRO_RS00965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYPRO_RS00965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYPRO_RS00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS00970 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS00970 PF00989 PAS fold CYPRO_RS00970 PF16736 Single Cache-like CYPRO_RS00975 PF05175 Methyltransferase small domain CYPRO_RS00980 PF00291 Pyridoxal-phosphate dependent enzyme CYPRO_RS00990 PF02580 D-Tyr-tRNA(Tyr) deacylase CYPRO_RS00995 PF00586 AIR synthase related protein, N-terminal domain CYPRO_RS00995 PF02769 AIR synthase related protein, C-terminal domain CYPRO_RS01005 PF00128 Alpha amylase, catalytic domain CYPRO_RS01025 PF01220 Dehydroquinase class II CYPRO_RS01030 PF01230 HIT domain CYPRO_RS01035 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYPRO_RS01035 PF18113 Rubredoxin binding C-terminal domain CYPRO_RS01040 PF01343 Peptidase family S49 CYPRO_RS01060 PF00701 Dihydrodipicolinate synthetase family CYPRO_RS01065 PF00311 Phosphoenolpyruvate carboxylase CYPRO_RS01080 PF00488 MutS domain V CYPRO_RS01080 PF01713 Smr domain CYPRO_RS01115 PF13005 zinc-finger binding domain of transposase IS66 CYPRO_RS01115 PF13007 Transposase C of IS166 homeodomain CYPRO_RS01115 PF03050 Transposase IS66 family CYPRO_RS01115 PF13817 IS66 C-terminal element CYPRO_RS01125 PF07980 SusD family CYPRO_RS01130 PF00593 TonB dependent receptor CYPRO_RS01130 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS01170 PF01435 Peptidase family M48 CYPRO_RS01175 PF00800 Prephenate dehydratase CYPRO_RS01175 PF01817 Chorismate mutase type II CYPRO_RS01180 PF02547 Queuosine biosynthesis protein CYPRO_RS01190 PF08645 Polynucleotide kinase 3 phosphatase CYPRO_RS01195 PF00293 NUDIX domain CYPRO_RS01200 PF01066 CDP-alcohol phosphatidyltransferase CYPRO_RS01205 PF00448 SRP54-type protein, GTPase domain CYPRO_RS01205 PF02881 SRP54-type protein, helical bundle domain CYPRO_RS01230 PF01380 SIS domain CYPRO_RS01235 PF12833 Helix-turn-helix domain CYPRO_RS01235 PF02311 AraC-like ligand binding domain CYPRO_RS01240 PF00403 Heavy-metal-associated domain CYPRO_RS01255 PF00873 AcrB/AcrD/AcrF family CYPRO_RS01270 PF00149 Calcineurin-like phosphoesterase CYPRO_RS01275 PF17674 HHH domain CYPRO_RS01275 PF00575 S1 RNA binding domain CYPRO_RS01275 PF09371 Tex-like protein N-terminal domain CYPRO_RS01275 PF16921 Tex protein YqgF-like domain CYPRO_RS01280 PF07690 Major Facilitator Superfamily CYPRO_RS01300 PF05649 Peptidase family M13 CYPRO_RS01300 PF01431 Peptidase family M13 CYPRO_RS01315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYPRO_RS01320 PF01642 Methylmalonyl-CoA mutase CYPRO_RS01320 PF02310 B12 binding domain CYPRO_RS01375 PF13173 AAA domain CYPRO_RS01375 PF13635 Domain of unknown function (DUF4143) CYPRO_RS01390 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYPRO_RS01390 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYPRO_RS01395 PF00270 DEAD/DEAH box helicase CYPRO_RS01395 PF00271 Helicase conserved C-terminal domain CYPRO_RS01410 PF02082 Transcriptional regulator CYPRO_RS01415 PF00939 Sodium:sulfate symporter transmembrane region CYPRO_RS01440 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS01440 PF00072 Response regulator receiver domain CYPRO_RS01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS01440 PF09308 LuxQ, periplasmic CYPRO_RS01445 PF04151 Bacterial pre-peptidase C-terminal domain CYPRO_RS01445 PF04389 Peptidase family M28 CYPRO_RS01450 PF00691 OmpA family CYPRO_RS01450 PF13505 Outer membrane protein beta-barrel domain CYPRO_RS01465 PF00578 AhpC/TSA family CYPRO_RS01485 PF01554 MatE CYPRO_RS01495 PF13464 Domain of unknown function (DUF4115) CYPRO_RS01505 PF05724 Thiopurine S-methyltransferase (TPMT) CYPRO_RS01525 PF01467 Cytidylyltransferase-like CYPRO_RS01530 PF00155 Aminotransferase class I and II CYPRO_RS01555 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CYPRO_RS01555 PF04055 Radical SAM superfamily CYPRO_RS01560 PF03099 Biotin/lipoate A/B protein ligase family CYPRO_RS01565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYPRO_RS01565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYPRO_RS01575 PF02021 Uncharacterised protein family UPF0102 CYPRO_RS01580 PF01619 Proline dehydrogenase CYPRO_RS01590 PF00072 Response regulator receiver domain CYPRO_RS01590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS01590 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS01590 PF00672 HAMP domain CYPRO_RS01590 PF01627 Hpt domain CYPRO_RS01615 PF03006 Haemolysin-III related CYPRO_RS01620 PF01914 MarC family integral membrane protein CYPRO_RS01640 PF01048 Phosphorylase superfamily CYPRO_RS01650 PF01112 Asparaginase CYPRO_RS01660 PF00120 Glutamine synthetase, catalytic domain CYPRO_RS01660 PF18318 Glutamine synthetase C-terminal domain CYPRO_RS01660 PF12437 Glutamine synthetase type III N terminal CYPRO_RS01665 PF01040 UbiA prenyltransferase family CYPRO_RS01670 PF13378 Enolase C-terminal domain-like CYPRO_RS01675 PF00501 AMP-binding enzyme CYPRO_RS01675 PF13193 AMP-binding enzyme C-terminal domain CYPRO_RS01680 PF00206 Lyase CYPRO_RS01680 PF10397 Adenylosuccinate lyase C-terminus CYPRO_RS01685 PF01595 Cyclin M transmembrane N-terminal domain CYPRO_RS01685 PF00571 CBS domain CYPRO_RS01685 PF03471 Transporter associated domain CYPRO_RS01690 PF00436 Single-strand binding protein family CYPRO_RS01695 PF01022 Bacterial regulatory protein, arsR family CYPRO_RS01705 PF01131 DNA topoisomerase CYPRO_RS01705 PF01751 Toprim domain CYPRO_RS01705 PF13368 Topoisomerase C-terminal repeat CYPRO_RS01715 PF13673 Acetyltransferase (GNAT) domain CYPRO_RS01720 PF00561 alpha/beta hydrolase fold CYPRO_RS01730 PF00072 Response regulator receiver domain CYPRO_RS01730 PF00158 Sigma-54 interaction domain CYPRO_RS01730 PF02954 Bacterial regulatory protein, Fis family CYPRO_RS01735 PF13649 Methyltransferase domain CYPRO_RS01745 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYPRO_RS01750 PF03372 Endonuclease/Exonuclease/phosphatase family CYPRO_RS01755 PF00579 tRNA synthetases class I (W and Y) CYPRO_RS01770 PF01113 Dihydrodipicolinate reductase, N-terminus CYPRO_RS01770 PF05173 Dihydrodipicolinate reductase, C-terminus CYPRO_RS01775 PF00696 Amino acid kinase family CYPRO_RS01775 PF01842 ACT domain CYPRO_RS01780 PF07687 Peptidase dimerisation domain CYPRO_RS01780 PF01546 Peptidase family M20/M25/M40 CYPRO_RS01785 PF01521 Iron-sulphur cluster biosynthesis CYPRO_RS01795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CYPRO_RS01795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CYPRO_RS01800 PF02660 Glycerol-3-phosphate acyltransferase CYPRO_RS01815 PF00924 Mechanosensitive ion channel CYPRO_RS01835 PF03606 C4-dicarboxylate anaerobic carrier CYPRO_RS01845 PF13344 Haloacid dehalogenase-like hydrolase CYPRO_RS01860 PF00326 Prolyl oligopeptidase family CYPRO_RS01860 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CYPRO_RS01865 PF00830 Ribosomal L28 family CYPRO_RS01870 PF00471 Ribosomal protein L33 CYPRO_RS01885 PF02574 Homocysteine S-methyltransferase CYPRO_RS01885 PF00809 Pterin binding enzyme CYPRO_RS01885 PF02965 Vitamin B12 dependent methionine synthase, activation domain CYPRO_RS01885 PF02607 B12 binding domain CYPRO_RS01885 PF02310 B12 binding domain CYPRO_RS01890 PF01645 Conserved region in glutamate synthase CYPRO_RS01890 PF01493 GXGXG motif CYPRO_RS01890 PF04898 Glutamate synthase central domain CYPRO_RS01890 PF00310 Glutamine amidotransferases class-II CYPRO_RS01895 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYPRO_RS01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYPRO_RS01905 PF00877 NlpC/P60 family CYPRO_RS01910 PF02219 Methylenetetrahydrofolate reductase CYPRO_RS01915 PF01381 Helix-turn-helix CYPRO_RS01930 PF04134 Protein of unknown function, DUF393 CYPRO_RS01935 PF03129 Anticodon binding domain CYPRO_RS01940 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CYPRO_RS01940 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYPRO_RS01970 PF10672 S-adenosylmethionine-dependent methyltransferase CYPRO_RS01970 PF02926 THUMP domain CYPRO_RS01970 PF01170 Putative RNA methylase family UPF0020 CYPRO_RS01975 PF13462 Thioredoxin CYPRO_RS01975 PF06965 Na+/H+ antiporter 1 CYPRO_RS02000 PF01699 Sodium/calcium exchanger protein CYPRO_RS02010 PF00171 Aldehyde dehydrogenase family CYPRO_RS02015 PF13509 S1 domain CYPRO_RS02015 PF17783 CvfB-like winged helix domain CYPRO_RS02030 PF01594 AI-2E family transporter CYPRO_RS02035 PF00072 Response regulator receiver domain CYPRO_RS02040 PF00291 Pyridoxal-phosphate dependent enzyme CYPRO_RS02045 PF11146 Protein of unknown function (DUF2905) CYPRO_RS02060 PF06969 HemN C-terminal domain CYPRO_RS02060 PF04055 Radical SAM superfamily CYPRO_RS02080 PF00128 Alpha amylase, catalytic domain CYPRO_RS02080 PF11941 Domain of unknown function (DUF3459) CYPRO_RS02085 PF02803 Thiolase, C-terminal domain CYPRO_RS02085 PF00108 Thiolase, N-terminal domain CYPRO_RS02090 PF00378 Enoyl-CoA hydratase/isomerase CYPRO_RS02090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYPRO_RS02090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYPRO_RS02145 PF00085 Thioredoxin CYPRO_RS02150 PF01053 Cys/Met metabolism PLP-dependent enzyme CYPRO_RS02155 PF12704 MacB-like periplasmic core domain CYPRO_RS02155 PF02687 FtsX-like permease family CYPRO_RS02160 PF12704 MacB-like periplasmic core domain CYPRO_RS02160 PF00005 ABC transporter CYPRO_RS02160 PF02687 FtsX-like permease family CYPRO_RS02165 PF00529 HlyD membrane-fusion protein of T1SS CYPRO_RS02165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYPRO_RS02170 PF16658 Class II release factor RF3, C-terminal domain CYPRO_RS02170 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS02185 PF12833 Helix-turn-helix domain CYPRO_RS02185 PF07495 Y_Y_Y domain CYPRO_RS02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS02185 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS02185 PF07494 Two component regulator propeller CYPRO_RS02185 PF00072 Response regulator receiver domain CYPRO_RS02190 PF01425 Amidase CYPRO_RS02205 PF02350 UDP-N-acetylglucosamine 2-epimerase CYPRO_RS02220 PF00534 Glycosyl transferases group 1 CYPRO_RS02220 PF00862 Sucrose synthase CYPRO_RS02225 PF13439 Glycosyltransferase Family 4 CYPRO_RS02225 PF00534 Glycosyl transferases group 1 CYPRO_RS02255 PF02592 Putative vitamin uptake transporter CYPRO_RS02260 PF01590 GAF domain CYPRO_RS02260 PF00158 Sigma-54 interaction domain CYPRO_RS02270 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS02270 PF16450 Proteasomal ATPase OB C-terminal domain CYPRO_RS02270 PF17758 Proteasomal ATPase OB N-terminal domain CYPRO_RS02280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CYPRO_RS02285 PF00689 Cation transporting ATPase, C-terminus CYPRO_RS02285 PF00690 Cation transporter/ATPase, N-terminus CYPRO_RS02290 PF05221 S-adenosyl-L-homocysteine hydrolase CYPRO_RS02290 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CYPRO_RS02300 PF11838 ERAP1-like C-terminal domain CYPRO_RS02300 PF01433 Peptidase family M1 domain CYPRO_RS02305 PF01541 GIY-YIG catalytic domain CYPRO_RS02345 PF10459 Peptidase S46 CYPRO_RS02355 PF01679 Proteolipid membrane potential modulator CYPRO_RS02380 PF16338 Domain of unknown function (DUF4968) CYPRO_RS02380 PF01055 Glycosyl hydrolases family 31 CYPRO_RS02380 PF13802 Galactose mutarotase-like CYPRO_RS02380 PF17137 Domain of unknown function (DUF5110) CYPRO_RS02385 PF00302 Chloramphenicol acetyltransferase CYPRO_RS02400 PF00437 Type II/IV secretion system protein CYPRO_RS02400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CYPRO_RS02425 PF00437 Type II/IV secretion system protein CYPRO_RS02440 PF07660 Secretin and TonB N terminus short domain CYPRO_RS02440 PF03958 Bacterial type II/III secretion system short domain CYPRO_RS02440 PF00263 Bacterial type II and III secretion system protein CYPRO_RS02440 PF11741 AMIN domain CYPRO_RS02450 PF00330 Aconitase family (aconitate hydratase) CYPRO_RS02450 PF00694 Aconitase C-terminal domain CYPRO_RS02465 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYPRO_RS02485 PF00403 Heavy-metal-associated domain CYPRO_RS02525 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS02525 PF00989 PAS fold CYPRO_RS02535 PF01751 Toprim domain CYPRO_RS02535 PF00204 DNA gyrase B CYPRO_RS02535 PF00986 DNA gyrase B subunit, carboxyl terminus CYPRO_RS02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS02540 PF03989 DNA gyrase C-terminal domain, beta-propeller CYPRO_RS02540 PF00521 DNA gyrase/topoisomerase IV, subunit A CYPRO_RS02565 PF00210 Ferritin-like domain CYPRO_RS02570 PF02272 DHHA1 domain CYPRO_RS02570 PF01368 DHH family CYPRO_RS02570 PF17768 RecJ OB domain CYPRO_RS02570 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CYPRO_RS02580 PF01430 Hsp33 protein CYPRO_RS02590 PF12795 Mechanosensitive ion channel porin domain CYPRO_RS02590 PF12794 Mechanosensitive ion channel inner membrane domain 1 CYPRO_RS02590 PF00924 Mechanosensitive ion channel CYPRO_RS02595 PF05233 PHB accumulation regulatory domain CYPRO_RS02595 PF07879 PHB/PHA accumulation regulator DNA-binding domain CYPRO_RS02605 PF00083 Sugar (and other) transporter CYPRO_RS02620 PF02132 RecR protein CYPRO_RS02620 PF13662 Toprim domain CYPRO_RS02625 PF02575 YbaB/EbfC DNA-binding family CYPRO_RS02630 PF12169 DNA polymerase III subunits gamma and tau domain III CYPRO_RS02635 PF05973 Phage derived protein Gp49-like (DUF891) CYPRO_RS02645 PF03606 C4-dicarboxylate anaerobic carrier CYPRO_RS02660 PF07885 Ion channel CYPRO_RS02665 PF01053 Cys/Met metabolism PLP-dependent enzyme CYPRO_RS02680 PF00248 Aldo/keto reductase family CYPRO_RS02695 PF00326 Prolyl oligopeptidase family CYPRO_RS02695 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CYPRO_RS02720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYPRO_RS02720 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYPRO_RS02725 PF00571 CBS domain CYPRO_RS02775 PF17760 UvrA interaction domain CYPRO_RS02775 PF17755 UvrA DNA-binding domain CYPRO_RS02790 PF14791 DNA polymerase beta thumb CYPRO_RS02790 PF02811 PHP domain CYPRO_RS02790 PF14716 Helix-hairpin-helix domain CYPRO_RS02795 PF00440 Bacterial regulatory proteins, tetR family CYPRO_RS02810 PF00873 AcrB/AcrD/AcrF family CYPRO_RS02835 PF00005 ABC transporter CYPRO_RS02840 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CYPRO_RS02850 PF04851 Type III restriction enzyme, res subunit CYPRO_RS02850 PF17757 UvrB interaction domain CYPRO_RS02850 PF12344 Ultra-violet resistance protein B CYPRO_RS02850 PF02151 UvrB/uvrC motif CYPRO_RS02850 PF00271 Helicase conserved C-terminal domain CYPRO_RS02860 PF00589 Phage integrase family CYPRO_RS02860 PF13495 Phage integrase, N-terminal SAM-like domain CYPRO_RS02870 PF00589 Phage integrase family CYPRO_RS02870 PF02899 Phage integrase, N-terminal SAM-like domain CYPRO_RS02885 PF13495 Phage integrase, N-terminal SAM-like domain CYPRO_RS02885 PF00589 Phage integrase family CYPRO_RS02910 PF09556 HaeIII restriction endonuclease CYPRO_RS02930 PF00795 Carbon-nitrogen hydrolase CYPRO_RS02950 PF01784 NIF3 (NGG1p interacting factor 3) CYPRO_RS02955 PF01168 Alanine racemase, N-terminal domain CYPRO_RS02960 PF13426 PAS domain CYPRO_RS02960 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS02960 PF00672 HAMP domain CYPRO_RS02970 PF01740 STAS domain CYPRO_RS02970 PF13426 PAS domain CYPRO_RS02975 PF03705 CheR methyltransferase, all-alpha domain CYPRO_RS02975 PF01739 CheR methyltransferase, SAM binding domain CYPRO_RS02975 PF08448 PAS fold CYPRO_RS02975 PF01339 CheB methylesterase CYPRO_RS02980 PF01627 Hpt domain CYPRO_RS02980 PF00072 Response regulator receiver domain CYPRO_RS02980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS02980 PF00672 HAMP domain CYPRO_RS02980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS02980 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS02985 PF00072 Response regulator receiver domain CYPRO_RS02985 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS02990 PF01668 SmpB protein CYPRO_RS03010 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CYPRO_RS03010 PF00326 Prolyl oligopeptidase family CYPRO_RS03020 PF03575 Peptidase family S51 CYPRO_RS03025 PF01926 50S ribosome-binding GTPase CYPRO_RS03025 PF07650 KH domain CYPRO_RS03030 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CYPRO_RS03040 PF06470 SMC proteins Flexible Hinge Domain CYPRO_RS03040 PF02463 RecF/RecN/SMC N terminal domain CYPRO_RS03050 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CYPRO_RS03055 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CYPRO_RS03060 PF03334 Na+/H+ antiporter subunit CYPRO_RS03065 PF00361 Proton-conducting membrane transporter CYPRO_RS03065 PF13244 Domain of unknown function (DUF4040) CYPRO_RS03065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYPRO_RS03070 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CYPRO_RS03075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYPRO_RS03080 PF00361 Proton-conducting membrane transporter CYPRO_RS03085 PF01899 Na+/H+ ion antiporter subunit CYPRO_RS03090 PF07690 Major Facilitator Superfamily CYPRO_RS03095 PF02699 Preprotein translocase subunit CYPRO_RS03100 PF00925 GTP cyclohydrolase II CYPRO_RS03100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CYPRO_RS03110 PF13581 Histidine kinase-like ATPase domain CYPRO_RS03115 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain CYPRO_RS03115 PF07228 Stage II sporulation protein E (SpoIIE) CYPRO_RS03120 PF01565 FAD binding domain CYPRO_RS03120 PF02913 FAD linked oxidases, C-terminal domain CYPRO_RS03125 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CYPRO_RS03130 PF00581 Rhodanese-like domain CYPRO_RS03135 PF00491 Arginase family CYPRO_RS03140 PF00480 ROK family CYPRO_RS03145 PF07516 SecA Wing and Scaffold domain CYPRO_RS03145 PF07517 SecA DEAD-like domain CYPRO_RS03145 PF01043 SecA preprotein cross-linking domain CYPRO_RS03150 PF00468 Ribosomal protein L34 CYPRO_RS03155 PF00825 Ribonuclease P CYPRO_RS03160 PF01809 Putative membrane protein insertion efficiency factor CYPRO_RS03165 PF14849 YidC periplasmic domain CYPRO_RS03165 PF02096 60Kd inner membrane protein CYPRO_RS03190 PF00132 Bacterial transferase hexapeptide (six repeats) CYPRO_RS03200 PF00501 AMP-binding enzyme CYPRO_RS03200 PF13193 AMP-binding enzyme C-terminal domain CYPRO_RS03205 PF05195 Aminopeptidase P, N-terminal domain CYPRO_RS03205 PF00557 Metallopeptidase family M24 CYPRO_RS03260 PF00069 Protein kinase domain CYPRO_RS03260 PF03793 PASTA domain CYPRO_RS03295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYPRO_RS03300 PF00528 Binding-protein-dependent transport system inner membrane component CYPRO_RS03305 PF12911 N-terminal TM domain of oligopeptide transport permease C CYPRO_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component CYPRO_RS03310 PF00005 ABC transporter CYPRO_RS03310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYPRO_RS03315 PF00005 ABC transporter CYPRO_RS03315 PF09383 NIL domain CYPRO_RS03390 PF02463 RecF/RecN/SMC N terminal domain CYPRO_RS03400 PF00570 HRDC domain CYPRO_RS03400 PF13361 UvrD-like helicase C-terminal domain CYPRO_RS03445 PF01510 N-acetylmuramoyl-L-alanine amidase CYPRO_RS03450 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS03450 PF00672 HAMP domain CYPRO_RS03450 PF01627 Hpt domain CYPRO_RS03450 PF00072 Response regulator receiver domain CYPRO_RS03450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS03460 PF02616 Segregation and condensation protein ScpA CYPRO_RS03475 PF01464 Transglycosylase SLT domain CYPRO_RS03475 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYPRO_RS03495 PF00378 Enoyl-CoA hydratase/isomerase CYPRO_RS03500 PF01368 DHH family CYPRO_RS03500 PF02272 DHHA1 domain CYPRO_RS03510 PF02817 e3 binding domain CYPRO_RS03510 PF00364 Biotin-requiring enzyme CYPRO_RS03510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYPRO_RS03515 PF02569 Pantoate-beta-alanine ligase CYPRO_RS03530 PF00456 Transketolase, thiamine diphosphate binding domain CYPRO_RS03530 PF02779 Transketolase, pyrimidine binding domain CYPRO_RS03530 PF02780 Transketolase, C-terminal domain CYPRO_RS03550 PF17762 HTH domain found in ParB protein CYPRO_RS03550 PF02195 ParB-like nuclease domain CYPRO_RS03555 PF13614 AAA domain CYPRO_RS03570 PF02151 UvrB/uvrC motif CYPRO_RS03570 PF01541 GIY-YIG catalytic domain CYPRO_RS03570 PF08459 UvrC Helix-hairpin-helix N-terminal CYPRO_RS03580 PF03772 Competence protein CYPRO_RS03580 PF00753 Metallo-beta-lactamase superfamily CYPRO_RS03615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYPRO_RS03615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYPRO_RS03625 PF00501 AMP-binding enzyme CYPRO_RS03625 PF13193 AMP-binding enzyme C-terminal domain CYPRO_RS03630 PF01575 MaoC like domain CYPRO_RS03645 PF08386 TAP-like protein CYPRO_RS03645 PF00561 alpha/beta hydrolase fold CYPRO_RS03665 PF00561 alpha/beta hydrolase fold CYPRO_RS03675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYPRO_RS03675 PF09180 Prolyl-tRNA synthetase, C-terminal CYPRO_RS03675 PF03129 Anticodon binding domain CYPRO_RS03680 PF02463 RecF/RecN/SMC N terminal domain CYPRO_RS03695 PF01256 Carbohydrate kinase CYPRO_RS03695 PF03853 YjeF-related protein N-terminus CYPRO_RS03705 PF03544 Gram-negative bacterial TonB protein C-terminal CYPRO_RS03725 PF00266 Aminotransferase class-V CYPRO_RS03735 PF00313 'Cold-shock' DNA-binding domain CYPRO_RS03745 PF04542 Sigma-70 region 2 CYPRO_RS03745 PF08281 Sigma-70, region 4 CYPRO_RS03760 PF00849 RNA pseudouridylate synthase CYPRO_RS03760 PF01479 S4 domain CYPRO_RS03765 PF00633 Helix-hairpin-helix motif CYPRO_RS03765 PF00730 HhH-GPD superfamily base excision DNA repair protein CYPRO_RS03780 PF00480 ROK family CYPRO_RS03790 PF13091 PLD-like domain CYPRO_RS03800 PF04542 Sigma-70 region 2 CYPRO_RS03800 PF08281 Sigma-70, region 4 CYPRO_RS03810 PF01906 Putative heavy-metal-binding CYPRO_RS03820 PF03806 AbgT putative transporter family CYPRO_RS03845 PF11799 impB/mucB/samB family C-terminal domain CYPRO_RS03845 PF00817 impB/mucB/samB family CYPRO_RS03855 PF08442 ATP-grasp domain CYPRO_RS03855 PF00549 CoA-ligase CYPRO_RS03865 PF02335 Cytochrome c552 CYPRO_RS03975 PF00679 Elongation factor G C-terminus CYPRO_RS03975 PF03144 Elongation factor Tu domain 2 CYPRO_RS03975 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS03980 PF00270 DEAD/DEAH box helicase CYPRO_RS03980 PF17191 RecG wedge domain CYPRO_RS03980 PF00271 Helicase conserved C-terminal domain CYPRO_RS03985 PF00164 Ribosomal protein S12/S23 CYPRO_RS03990 PF00177 Ribosomal protein S7p/S5e CYPRO_RS03995 PF03144 Elongation factor Tu domain 2 CYPRO_RS03995 PF14492 Elongation Factor G, domain II CYPRO_RS03995 PF03764 Elongation factor G, domain IV CYPRO_RS03995 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS03995 PF00679 Elongation factor G C-terminus CYPRO_RS04000 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS04000 PF03144 Elongation factor Tu domain 2 CYPRO_RS04000 PF03143 Elongation factor Tu C-terminal domain CYPRO_RS04005 PF00338 Ribosomal protein S10p/S20e CYPRO_RS04010 PF00297 Ribosomal protein L3 CYPRO_RS04015 PF00573 Ribosomal protein L4/L1 family CYPRO_RS04020 PF00276 Ribosomal protein L23 CYPRO_RS04025 PF03947 Ribosomal Proteins L2, C-terminal domain CYPRO_RS04025 PF00181 Ribosomal Proteins L2, RNA binding domain CYPRO_RS04030 PF00203 Ribosomal protein S19 CYPRO_RS04035 PF00237 Ribosomal protein L22p/L17e CYPRO_RS04040 PF00189 Ribosomal protein S3, C-terminal domain CYPRO_RS04040 PF07650 KH domain CYPRO_RS04045 PF00252 Ribosomal protein L16p/L10e CYPRO_RS04050 PF00831 Ribosomal L29 protein CYPRO_RS04055 PF00366 Ribosomal protein S17 CYPRO_RS04060 PF00238 Ribosomal protein L14p/L23e CYPRO_RS04065 PF00467 KOW motif CYPRO_RS04065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CYPRO_RS04070 PF00673 ribosomal L5P family C-terminus CYPRO_RS04070 PF00281 Ribosomal protein L5 CYPRO_RS04075 PF00253 Ribosomal protein S14p/S29e CYPRO_RS04080 PF00410 Ribosomal protein S8 CYPRO_RS04085 PF00347 Ribosomal protein L6 CYPRO_RS04090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CYPRO_RS04095 PF00333 Ribosomal protein S5, N-terminal domain CYPRO_RS04095 PF03719 Ribosomal protein S5, C-terminal domain CYPRO_RS04100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CYPRO_RS04105 PF00344 SecY translocase CYPRO_RS04110 PF00557 Metallopeptidase family M24 CYPRO_RS04115 PF01176 Translation initiation factor 1A / IF-1 CYPRO_RS04120 PF00444 Ribosomal protein L36 CYPRO_RS04125 PF00416 Ribosomal protein S13/S18 CYPRO_RS04130 PF00411 Ribosomal protein S11 CYPRO_RS04135 PF01479 S4 domain CYPRO_RS04135 PF00163 Ribosomal protein S4/S9 N-terminal domain CYPRO_RS04140 PF01000 RNA polymerase Rpb3/RpoA insert domain CYPRO_RS04140 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYPRO_RS04140 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYPRO_RS04145 PF01196 Ribosomal protein L17 CYPRO_RS04150 PF01593 Flavin containing amine oxidoreductase CYPRO_RS04175 PF07995 Glucose / Sorbosone dehydrogenase CYPRO_RS04195 PF13411 MerR HTH family regulatory protein CYPRO_RS04195 PF00145 C-5 cytosine-specific DNA methylase CYPRO_RS04210 PF03852 DNA mismatch endonuclease Vsr CYPRO_RS04225 PF03747 ADP-ribosylglycohydrolase CYPRO_RS04230 PF17862 AAA+ lid domain CYPRO_RS04230 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS04230 PF06480 FtsH Extracellular CYPRO_RS04230 PF01434 Peptidase family M41 CYPRO_RS04260 PF00378 Enoyl-CoA hydratase/isomerase CYPRO_RS04280 PF00291 Pyridoxal-phosphate dependent enzyme CYPRO_RS04290 PF06426 Serine acetyltransferase, N-terminal CYPRO_RS04290 PF00132 Bacterial transferase hexapeptide (six repeats) CYPRO_RS04300 PF01048 Phosphorylase superfamily CYPRO_RS04305 PF00753 Metallo-beta-lactamase superfamily CYPRO_RS04305 PF16123 Hydroxyacylglutathione hydrolase C-terminus CYPRO_RS04310 PF02562 PhoH-like protein CYPRO_RS04315 PF00834 Ribulose-phosphate 3 epimerase family CYPRO_RS04355 PF02803 Thiolase, C-terminal domain CYPRO_RS04355 PF00108 Thiolase, N-terminal domain CYPRO_RS04365 PF01053 Cys/Met metabolism PLP-dependent enzyme CYPRO_RS04385 PF01042 Endoribonuclease L-PSP CYPRO_RS04395 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYPRO_RS04400 PF01016 Ribosomal L27 protein CYPRO_RS04405 PF00829 Ribosomal prokaryotic L21 protein CYPRO_RS04415 PF00085 Thioredoxin CYPRO_RS04420 PF00717 Peptidase S24-like CYPRO_RS04420 PF01726 LexA DNA binding domain CYPRO_RS04425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYPRO_RS04425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYPRO_RS04425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYPRO_RS04425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYPRO_RS04435 PF01923 Cobalamin adenosyltransferase CYPRO_RS04440 PF09186 Domain of unknown function (DUF1949) CYPRO_RS04440 PF01205 Uncharacterized protein family UPF0029 CYPRO_RS04450 PF00890 FAD binding domain CYPRO_RS04450 PF02910 Fumarate reductase flavoprotein C-term CYPRO_RS04455 PF13085 2Fe-2S iron-sulfur cluster binding domain CYPRO_RS04510 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CYPRO_RS04510 PF07676 WD40-like Beta Propeller Repeat CYPRO_RS04510 PF00326 Prolyl oligopeptidase family CYPRO_RS04515 PF01625 Peptide methionine sulfoxide reductase CYPRO_RS04520 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYPRO_RS04530 PF00483 Nucleotidyl transferase CYPRO_RS04535 PF08245 Mur ligase middle domain CYPRO_RS04535 PF01225 Mur ligase family, catalytic domain CYPRO_RS04535 PF02875 Mur ligase family, glutamate ligase domain CYPRO_RS04540 PF12704 MacB-like periplasmic core domain CYPRO_RS04540 PF02687 FtsX-like permease family CYPRO_RS04545 PF02806 Alpha amylase, C-terminal all-beta domain CYPRO_RS04545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYPRO_RS04545 PF00128 Alpha amylase, catalytic domain CYPRO_RS04550 PF02446 4-alpha-glucanotransferase CYPRO_RS04555 PF08323 Starch synthase catalytic domain CYPRO_RS04555 PF00534 Glycosyl transferases group 1 CYPRO_RS04575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYPRO_RS04575 PF07498 Rho termination factor, N-terminal domain CYPRO_RS04575 PF07497 Rho termination factor, RNA-binding domain CYPRO_RS04580 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYPRO_RS04580 PF00005 ABC transporter CYPRO_RS04585 PF05343 M42 glutamyl aminopeptidase CYPRO_RS04595 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CYPRO_RS04600 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS04600 PF00593 TonB dependent receptor CYPRO_RS04610 PF01297 Zinc-uptake complex component A periplasmic CYPRO_RS04615 PF00005 ABC transporter CYPRO_RS04620 PF00950 ABC 3 transport family CYPRO_RS04625 PF00950 ABC 3 transport family CYPRO_RS04630 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYPRO_RS04635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYPRO_RS04645 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS04645 PF00593 TonB dependent receptor CYPRO_RS04665 PF13090 Polyphosphate kinase C-terminal domain 2 CYPRO_RS04665 PF02503 Polyphosphate kinase middle domain CYPRO_RS04665 PF17941 Polyphosphate kinase C-terminal domain 1 CYPRO_RS04665 PF13089 Polyphosphate kinase N-terminal domain CYPRO_RS04670 PF02690 Na+/Pi-cotransporter CYPRO_RS04685 PF04264 YceI-like domain CYPRO_RS04695 PF02245 Methylpurine-DNA glycosylase (MPG) CYPRO_RS04705 PF00474 Sodium:solute symporter family CYPRO_RS04715 PF01168 Alanine racemase, N-terminal domain CYPRO_RS04725 PF01546 Peptidase family M20/M25/M40 CYPRO_RS04725 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYPRO_RS04730 PF00593 TonB dependent receptor CYPRO_RS04730 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS04755 PF02028 BCCT, betaine/carnitine/choline family transporter CYPRO_RS04785 PF00501 AMP-binding enzyme CYPRO_RS04785 PF13193 AMP-binding enzyme C-terminal domain CYPRO_RS04785 PF16177 Acetyl-coenzyme A synthetase N-terminus CYPRO_RS04790 PF00989 PAS fold CYPRO_RS04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS04790 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS04800 PF11798 IMS family HHH motif CYPRO_RS04800 PF11799 impB/mucB/samB family C-terminal domain CYPRO_RS04800 PF00817 impB/mucB/samB family CYPRO_RS04815 PF07995 Glucose / Sorbosone dehydrogenase CYPRO_RS04825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CYPRO_RS04825 PF01243 Pyridoxamine 5'-phosphate oxidase CYPRO_RS04860 PF10437 Bacterial lipoate protein ligase C-terminus CYPRO_RS04860 PF03099 Biotin/lipoate A/B protein ligase family CYPRO_RS04875 PF05139 Erythromycin esterase CYPRO_RS04875 PF00156 Phosphoribosyl transferase domain CYPRO_RS04885 PF08534 Redoxin CYPRO_RS04900 PF03330 Lytic transglycolase CYPRO_RS04900 PF05036 Sporulation related domain CYPRO_RS04930 PF01494 FAD binding domain CYPRO_RS04940 PF02797 Chalcone and stilbene synthases, C-terminal domain CYPRO_RS04940 PF00195 Chalcone and stilbene synthases, N-terminal domain CYPRO_RS04945 PF01554 MatE CYPRO_RS04950 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS04950 PF00672 HAMP domain CYPRO_RS04955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYPRO_RS04955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYPRO_RS04975 PF02547 Queuosine biosynthesis protein CYPRO_RS04980 PF02542 YgbB family CYPRO_RS04980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CYPRO_RS05010 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS05010 PF03143 Elongation factor Tu C-terminal domain CYPRO_RS05010 PF03144 Elongation factor Tu domain 2 CYPRO_RS05025 PF00467 KOW motif CYPRO_RS05025 PF02357 Transcription termination factor nusG CYPRO_RS05030 PF03946 Ribosomal protein L11, N-terminal domain CYPRO_RS05030 PF00298 Ribosomal protein L11, RNA binding domain CYPRO_RS05035 PF00687 Ribosomal protein L1p/L10e family CYPRO_RS05040 PF00466 Ribosomal protein L10 CYPRO_RS05045 PF00542 Ribosomal protein L7/L12 C-terminal domain CYPRO_RS05045 PF16320 Ribosomal protein L7/L12 dimerisation domain CYPRO_RS05050 PF10385 RNA polymerase beta subunit external 1 domain CYPRO_RS05050 PF04565 RNA polymerase Rpb2, domain 3 CYPRO_RS05050 PF04560 RNA polymerase Rpb2, domain 7 CYPRO_RS05050 PF00562 RNA polymerase Rpb2, domain 6 CYPRO_RS05050 PF04561 RNA polymerase Rpb2, domain 2 CYPRO_RS05050 PF04563 RNA polymerase beta subunit CYPRO_RS05055 PF04997 RNA polymerase Rpb1, domain 1 CYPRO_RS05055 PF00623 RNA polymerase Rpb1, domain 2 CYPRO_RS05055 PF05000 RNA polymerase Rpb1, domain 4 CYPRO_RS05055 PF04983 RNA polymerase Rpb1, domain 3 CYPRO_RS05055 PF04998 RNA polymerase Rpb1, domain 5 CYPRO_RS05060 PF00672 HAMP domain CYPRO_RS05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS05060 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS05060 PF01627 Hpt domain CYPRO_RS05060 PF00072 Response regulator receiver domain CYPRO_RS05060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS05070 PF00873 AcrB/AcrD/AcrF family CYPRO_RS05075 PF00873 AcrB/AcrD/AcrF family CYPRO_RS05080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYPRO_RS05080 PF00529 HlyD membrane-fusion protein of T1SS CYPRO_RS05085 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYPRO_RS05090 PF01593 Flavin containing amine oxidoreductase CYPRO_RS05100 PF00072 Response regulator receiver domain CYPRO_RS05100 PF04397 LytTr DNA-binding domain CYPRO_RS05110 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS05110 PF00989 PAS fold CYPRO_RS05110 PF00072 Response regulator receiver domain CYPRO_RS05110 PF18415 Histidine kinase receptor ArcB trans-membrane domain CYPRO_RS05110 PF01627 Hpt domain CYPRO_RS05115 PF00072 Response regulator receiver domain CYPRO_RS05115 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS05120 PF02397 Bacterial sugar transferase CYPRO_RS05125 PF00534 Glycosyl transferases group 1 CYPRO_RS05125 PF13439 Glycosyltransferase Family 4 CYPRO_RS05135 PF13807 G-rich domain on putative tyrosine kinase CYPRO_RS05135 PF13614 AAA domain CYPRO_RS05135 PF02706 Chain length determinant protein CYPRO_RS05150 PF00535 Glycosyl transferase family 2 CYPRO_RS05190 PF01740 STAS domain CYPRO_RS05195 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS05195 PF00072 Response regulator receiver domain CYPRO_RS05200 PF06974 Protein of unknown function (DUF1298) CYPRO_RS05200 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CYPRO_RS05255 PF02146 Sir2 family CYPRO_RS05270 PF00106 short chain dehydrogenase CYPRO_RS05275 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CYPRO_RS05280 PF00155 Aminotransferase class I and II CYPRO_RS05290 PF07478 D-ala D-ala ligase C-terminus CYPRO_RS05290 PF01820 D-ala D-ala ligase N-terminus CYPRO_RS05295 PF00989 PAS fold CYPRO_RS05295 PF11808 Phosphate regulon sensor protein PhoR CYPRO_RS05295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS05295 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS05300 PF00072 Response regulator receiver domain CYPRO_RS05300 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS05310 PF02768 DNA polymerase III beta subunit, C-terminal domain CYPRO_RS05310 PF02767 DNA polymerase III beta subunit, central domain CYPRO_RS05310 PF00712 DNA polymerase III beta subunit, N-terminal domain CYPRO_RS05315 PF02381 MraZ protein, putative antitoxin-like CYPRO_RS05320 PF01795 MraW methylase family CYPRO_RS05330 PF03717 Penicillin-binding Protein dimerisation domain CYPRO_RS05330 PF00905 Penicillin binding protein transpeptidase domain CYPRO_RS05330 PF03793 PASTA domain CYPRO_RS05335 PF02875 Mur ligase family, glutamate ligase domain CYPRO_RS05335 PF01225 Mur ligase family, catalytic domain CYPRO_RS05335 PF08245 Mur ligase middle domain CYPRO_RS05340 PF00953 Glycosyl transferase family 4 CYPRO_RS05340 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CYPRO_RS05345 PF02875 Mur ligase family, glutamate ligase domain CYPRO_RS05345 PF08245 Mur ligase middle domain CYPRO_RS05350 PF01098 Cell cycle protein CYPRO_RS05355 PF04101 Glycosyltransferase family 28 C-terminal domain CYPRO_RS05355 PF03033 Glycosyltransferase family 28 N-terminal domain CYPRO_RS05360 PF01225 Mur ligase family, catalytic domain CYPRO_RS05360 PF02875 Mur ligase family, glutamate ligase domain CYPRO_RS05360 PF08245 Mur ligase middle domain CYPRO_RS05370 PF02491 SHS2 domain inserted in FTSA CYPRO_RS05375 PF12327 FtsZ family, C-terminal domain CYPRO_RS05375 PF00091 Tubulin/FtsZ family, GTPase domain CYPRO_RS05380 PF01569 PAP2 superfamily CYPRO_RS05400 PF13635 Domain of unknown function (DUF4143) CYPRO_RS05400 PF13173 AAA domain CYPRO_RS05405 PF03641 Possible lysine decarboxylase CYPRO_RS05415 PF05552 Conserved TM helix CYPRO_RS05415 PF00924 Mechanosensitive ion channel CYPRO_RS05425 PF00082 Subtilase family CYPRO_RS05440 PF02254 TrkA-N domain CYPRO_RS05440 PF02080 TrkA-C domain CYPRO_RS05450 PF00162 Phosphoglycerate kinase CYPRO_RS05465 PF00334 Nucleoside diphosphate kinase CYPRO_RS05470 PF07075 Protein of unknown function (DUF1343) CYPRO_RS05475 PF00664 ABC transporter transmembrane region CYPRO_RS05475 PF00005 ABC transporter CYPRO_RS05605 PF01618 MotA/TolQ/ExbB proton channel family CYPRO_RS05610 PF00691 OmpA family CYPRO_RS05610 PF13677 Membrane MotB of proton-channel complex MotA/MotB CYPRO_RS05615 PF00082 Subtilase family CYPRO_RS05640 PF04055 Radical SAM superfamily CYPRO_RS05645 PF02901 Pyruvate formate lyase-like CYPRO_RS05645 PF01228 Glycine radical CYPRO_RS05660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYPRO_RS05675 PF01648 4'-phosphopantetheinyl transferase superfamily CYPRO_RS05685 PF00152 tRNA synthetases class II (D, K and N) CYPRO_RS05685 PF01336 OB-fold nucleic acid binding domain CYPRO_RS05690 PF07581 The GLUG motif CYPRO_RS05690 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) CYPRO_RS05700 PF01960 ArgJ family CYPRO_RS05705 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYPRO_RS05705 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYPRO_RS05710 PF00202 Aminotransferase class-III CYPRO_RS05715 PF00696 Amino acid kinase family CYPRO_RS05725 PF00156 Phosphoribosyl transferase domain CYPRO_RS05730 PF01926 50S ribosome-binding GTPase CYPRO_RS05735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYPRO_RS05735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYPRO_RS05735 PF01842 ACT domain CYPRO_RS05745 PF00171 Aldehyde dehydrogenase family CYPRO_RS05755 PF01370 NAD dependent epimerase/dehydratase family CYPRO_RS05760 PF02719 Polysaccharide biosynthesis protein CYPRO_RS05770 PF00293 NUDIX domain CYPRO_RS05780 PF16861 Carbamoyltransferase C-terminus CYPRO_RS05780 PF02543 Carbamoyltransferase N-terminus CYPRO_RS05785 PF03449 Transcription elongation factor, N-terminal CYPRO_RS05785 PF01272 Transcription elongation factor, GreA/GreB, C-term CYPRO_RS05795 PF09334 tRNA synthetases class I (M) CYPRO_RS05795 PF01588 Putative tRNA binding domain CYPRO_RS05800 PF00128 Alpha amylase, catalytic domain CYPRO_RS05800 PF03714 Bacterial pullanase-associated domain CYPRO_RS05800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYPRO_RS05810 PF00209 Sodium:neurotransmitter symporter family CYPRO_RS05815 PF01132 Elongation factor P (EF-P) OB domain CYPRO_RS05815 PF09285 Elongation factor P, C-terminal CYPRO_RS05815 PF08207 Elongation factor P (EF-P) KOW-like domain CYPRO_RS05820 PF00364 Biotin-requiring enzyme CYPRO_RS05825 PF00289 Biotin carboxylase, N-terminal domain CYPRO_RS05825 PF02785 Biotin carboxylase C-terminal domain CYPRO_RS05825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYPRO_RS05830 PF01597 Glycine cleavage H-protein CYPRO_RS05835 PF00958 GMP synthase C terminal domain CYPRO_RS05835 PF02540 NAD synthase CYPRO_RS05835 PF00117 Glutamine amidotransferase class-I CYPRO_RS05870 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CYPRO_RS05875 PF00709 Adenylosuccinate synthetase CYPRO_RS05880 PF01740 STAS domain CYPRO_RS05885 PF02355 Protein export membrane protein CYPRO_RS05885 PF07549 SecD/SecF GG Motif CYPRO_RS05890 PF07549 SecD/SecF GG Motif CYPRO_RS05890 PF02355 Protein export membrane protein CYPRO_RS05900 PF00459 Inositol monophosphatase family CYPRO_RS05935 PF00005 ABC transporter CYPRO_RS05935 PF13732 Domain of unknown function (DUF4162) CYPRO_RS05940 PF08323 Starch synthase catalytic domain CYPRO_RS05940 PF00534 Glycosyl transferases group 1 CYPRO_RS05945 PF00483 Nucleotidyl transferase CYPRO_RS05950 PF01734 Patatin-like phospholipase CYPRO_RS05960 PF00582 Universal stress protein family CYPRO_RS05960 PF00999 Sodium/hydrogen exchanger family CYPRO_RS05965 PF00571 CBS domain CYPRO_RS05965 PF00478 IMP dehydrogenase / GMP reductase domain CYPRO_RS05995 PF00119 ATP synthase A chain CYPRO_RS06000 PF00137 ATP synthase subunit C CYPRO_RS06005 PF00430 ATP synthase B/B' CF(0) CYPRO_RS06010 PF00213 ATP synthase delta (OSCP) subunit CYPRO_RS06015 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYPRO_RS06015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYPRO_RS06015 PF00306 ATP synthase alpha/beta chain, C terminal domain CYPRO_RS06020 PF00231 ATP synthase CYPRO_RS06055 PF05656 Protein of unknown function (DUF805) CYPRO_RS06060 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS06060 PF00593 TonB dependent receptor CYPRO_RS06065 PF07676 WD40-like Beta Propeller Repeat CYPRO_RS06065 PF00326 Prolyl oligopeptidase family CYPRO_RS06065 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CYPRO_RS06075 PF01641 SelR domain CYPRO_RS06115 PF08241 Methyltransferase domain CYPRO_RS06135 PF00196 Bacterial regulatory proteins, luxR family CYPRO_RS06135 PF00072 Response regulator receiver domain CYPRO_RS06145 PF03190 Protein of unknown function, DUF255 CYPRO_RS06150 PF18693 TRAM domain CYPRO_RS06150 PF04055 Radical SAM superfamily CYPRO_RS06150 PF00919 Uncharacterized protein family UPF0004 CYPRO_RS06155 PF00902 Sec-independent protein translocase protein (TatC) CYPRO_RS06160 PF00464 Serine hydroxymethyltransferase CYPRO_RS06165 PF02502 Ribose/Galactose Isomerase CYPRO_RS06175 PF09087 Cyclomaltodextrinase, N-terminal CYPRO_RS06175 PF10438 Cyclo-malto-dextrinase C-terminal domain CYPRO_RS06175 PF00128 Alpha amylase, catalytic domain CYPRO_RS06200 PF12843 Putative quorum-sensing-regulated virulence factor CYPRO_RS06240 PF00753 Metallo-beta-lactamase superfamily CYPRO_RS06255 PF00535 Glycosyl transferase family 2 CYPRO_RS06260 PF08241 Methyltransferase domain CYPRO_RS06265 PF14602 Hexapeptide repeat of succinyl-transferase CYPRO_RS06265 PF12804 MobA-like NTP transferase domain CYPRO_RS06265 PF00132 Bacterial transferase hexapeptide (six repeats) CYPRO_RS06270 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CYPRO_RS06285 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS06285 PF00593 TonB dependent receptor CYPRO_RS06295 PF07556 Protein of unknown function (DUF1538) CYPRO_RS06300 PF00459 Inositol monophosphatase family CYPRO_RS06305 PF02585 GlcNAc-PI de-N-acetylase CYPRO_RS06330 PF00005 ABC transporter CYPRO_RS06335 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYPRO_RS06335 PF08501 Shikimate dehydrogenase substrate binding domain CYPRO_RS06340 PF02578 Multi-copper polyphenol oxidoreductase laccase CYPRO_RS06345 PF00850 Histone deacetylase domain CYPRO_RS06370 PF00270 DEAD/DEAH box helicase CYPRO_RS06370 PF08494 DEAD/H associated CYPRO_RS06370 PF00271 Helicase conserved C-terminal domain CYPRO_RS06375 PF00171 Aldehyde dehydrogenase family CYPRO_RS06380 PF00365 Phosphofructokinase CYPRO_RS06385 PF00719 Inorganic pyrophosphatase CYPRO_RS06405 PF00171 Aldehyde dehydrogenase family CYPRO_RS06425 PF00795 Carbon-nitrogen hydrolase CYPRO_RS06450 PF07495 Y_Y_Y domain CYPRO_RS06450 PF00072 Response regulator receiver domain CYPRO_RS06450 PF12833 Helix-turn-helix domain CYPRO_RS06450 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS06450 PF07494 Two component regulator propeller CYPRO_RS06490 PF07478 D-ala D-ala ligase C-terminus CYPRO_RS06490 PF01820 D-ala D-ala ligase N-terminus CYPRO_RS06495 PF00883 Cytosol aminopeptidase family, catalytic domain CYPRO_RS06495 PF02789 Cytosol aminopeptidase family, N-terminal domain CYPRO_RS06500 PF00561 alpha/beta hydrolase fold CYPRO_RS06525 PF12146 Serine aminopeptidase, S33 CYPRO_RS06545 PF01026 TatD related DNase CYPRO_RS06560 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYPRO_RS06560 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYPRO_RS06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS06575 PF00183 Hsp90 protein CYPRO_RS06645 PF01571 Aminomethyltransferase folate-binding domain CYPRO_RS06645 PF08669 Glycine cleavage T-protein C-terminal barrel domain CYPRO_RS06650 PF04029 2-phosphosulpholactate phosphatase CYPRO_RS06655 PF17854 FtsK alpha domain CYPRO_RS06655 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CYPRO_RS06655 PF01580 FtsK/SpoIIIE family CYPRO_RS06655 PF09397 Ftsk gamma domain CYPRO_RS06680 PF01618 MotA/TolQ/ExbB proton channel family CYPRO_RS06700 PF03073 TspO/MBR family CYPRO_RS06730 PF00082 Subtilase family CYPRO_RS06745 PF01979 Amidohydrolase family CYPRO_RS06770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYPRO_RS06770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYPRO_RS06775 PF00764 Arginosuccinate synthase CYPRO_RS06780 PF00206 Lyase CYPRO_RS06785 PF13173 AAA domain CYPRO_RS06785 PF13635 Domain of unknown function (DUF4143) CYPRO_RS06790 PF02386 Cation transport protein CYPRO_RS06810 PF07722 Peptidase C26 CYPRO_RS06820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYPRO_RS06830 PF00391 PEP-utilising enzyme, mobile domain CYPRO_RS06830 PF02887 Pyruvate kinase, alpha/beta domain CYPRO_RS06830 PF00224 Pyruvate kinase, barrel domain CYPRO_RS06840 PF01180 Dihydroorotate dehydrogenase CYPRO_RS06845 PF02875 Mur ligase family, glutamate ligase domain CYPRO_RS06845 PF08245 Mur ligase middle domain CYPRO_RS06850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYPRO_RS06850 PF07498 Rho termination factor, N-terminal domain CYPRO_RS06850 PF07497 Rho termination factor, RNA-binding domain CYPRO_RS06860 PF01343 Peptidase family S49 CYPRO_RS06870 PF00571 CBS domain CYPRO_RS06870 PF02163 Peptidase family M50 CYPRO_RS06875 PF01168 Alanine racemase, N-terminal domain CYPRO_RS06875 PF00842 Alanine racemase, C-terminal domain CYPRO_RS06880 PF17102 Stealth protein CR3, conserved region 3 CYPRO_RS06880 PF17101 Stealth protein CR1, conserved region 1 CYPRO_RS06880 PF17103 Stealth protein CR4, conserved region 4 CYPRO_RS06880 PF11380 Stealth protein CR2, conserved region 2 CYPRO_RS06900 PF16657 Maltogenic Amylase, C-terminal domain CYPRO_RS06900 PF02903 Alpha amylase, N-terminal ig-like domain CYPRO_RS06900 PF00128 Alpha amylase, catalytic domain CYPRO_RS06925 PF13817 IS66 C-terminal element CYPRO_RS06925 PF03050 Transposase IS66 family CYPRO_RS06925 PF13007 Transposase C of IS166 homeodomain CYPRO_RS06925 PF13005 zinc-finger binding domain of transposase IS66 CYPRO_RS06930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYPRO_RS06955 PF03702 Anhydro-N-acetylmuramic acid kinase CYPRO_RS06960 PF12419 SNF2 Helicase protein CYPRO_RS06960 PF00271 Helicase conserved C-terminal domain CYPRO_RS06960 PF00176 SNF2 family N-terminal domain CYPRO_RS06965 PF10415 Fumarase C C-terminus CYPRO_RS06965 PF00206 Lyase CYPRO_RS06970 PF00245 Alkaline phosphatase CYPRO_RS06975 PF00106 short chain dehydrogenase CYPRO_RS06985 PF12146 Serine aminopeptidase, S33 CYPRO_RS07000 PF00708 Acylphosphatase CYPRO_RS07015 PF00535 Glycosyl transferase family 2 CYPRO_RS07020 PF02397 Bacterial sugar transferase CYPRO_RS07030 PF04679 ATP dependent DNA ligase C terminal region CYPRO_RS07030 PF04675 DNA ligase N terminus CYPRO_RS07030 PF01068 ATP dependent DNA ligase domain CYPRO_RS07060 PF00375 Sodium:dicarboxylate symporter family CYPRO_RS07075 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CYPRO_RS07075 PF06165 Glycosyltransferase family 36 CYPRO_RS07075 PF10091 Putative glucoamylase CYPRO_RS07100 PF12008 Type I restriction and modification enzyme - subunit R C terminal CYPRO_RS07100 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CYPRO_RS07100 PF18766 SWI2/SNF2 ATPase CYPRO_RS07120 PF02384 N-6 DNA Methylase CYPRO_RS07120 PF12161 HsdM N-terminal domain CYPRO_RS07130 PF06953 Arsenical resistance operon trans-acting repressor ArsD CYPRO_RS07135 PF02374 Anion-transporting ATPase CYPRO_RS07200 PF02463 RecF/RecN/SMC N terminal domain CYPRO_RS07210 PF00873 AcrB/AcrD/AcrF family CYPRO_RS07235 PF00158 Sigma-54 interaction domain CYPRO_RS07235 PF02954 Bacterial regulatory protein, Fis family CYPRO_RS07235 PF00072 Response regulator receiver domain CYPRO_RS07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS07240 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS07255 PF01928 CYTH domain CYPRO_RS07265 PF01865 Protein of unknown function DUF47 CYPRO_RS07270 PF01384 Phosphate transporter family CYPRO_RS07300 PF00722 Glycosyl hydrolases family 16 CYPRO_RS07335 PF00083 Sugar (and other) transporter CYPRO_RS07340 PF14310 Fibronectin type III-like domain CYPRO_RS07340 PF00933 Glycosyl hydrolase family 3 N terminal domain CYPRO_RS07340 PF01915 Glycosyl hydrolase family 3 C-terminal domain CYPRO_RS07355 PF01339 CheB methylesterase CYPRO_RS07355 PF00072 Response regulator receiver domain CYPRO_RS07360 PF09308 LuxQ, periplasmic CYPRO_RS07360 PF00072 Response regulator receiver domain CYPRO_RS07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS07360 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS07365 PF14310 Fibronectin type III-like domain CYPRO_RS07365 PF00933 Glycosyl hydrolase family 3 N terminal domain CYPRO_RS07365 PF01915 Glycosyl hydrolase family 3 C-terminal domain CYPRO_RS07370 PF00356 Bacterial regulatory proteins, lacI family CYPRO_RS07380 PF03703 Bacterial PH domain CYPRO_RS07385 PF03703 Bacterial PH domain CYPRO_RS07395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CYPRO_RS07395 PF00586 AIR synthase related protein, N-terminal domain CYPRO_RS07395 PF02769 AIR synthase related protein, C-terminal domain CYPRO_RS07425 PF12127 SigmaW regulon antibacterial CYPRO_RS07430 PF03030 Inorganic H+ pyrophosphatase CYPRO_RS07440 PF00465 Iron-containing alcohol dehydrogenase CYPRO_RS07445 PF01546 Peptidase family M20/M25/M40 CYPRO_RS07445 PF07687 Peptidase dimerisation domain CYPRO_RS07470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYPRO_RS07470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYPRO_RS07485 PF09827 CRISPR associated protein Cas2 CYPRO_RS07495 PF13395 HNH endonuclease CYPRO_RS07495 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 CYPRO_RS07495 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 CYPRO_RS07495 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 CYPRO_RS07500 PF01965 DJ-1/PfpI family CYPRO_RS07535 PF01702 Queuine tRNA-ribosyltransferase CYPRO_RS07540 PF02397 Bacterial sugar transferase CYPRO_RS07545 PF00535 Glycosyl transferase family 2 CYPRO_RS07550 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CYPRO_RS07560 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CYPRO_RS07560 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CYPRO_RS07590 PF01370 NAD dependent epimerase/dehydratase family CYPRO_RS07590 PF08338 Domain of unknown function (DUF1731) CYPRO_RS07610 PF16360 GTP-binding GTPase Middle Region CYPRO_RS07610 PF13167 GTP-binding GTPase N-terminal CYPRO_RS07610 PF01926 50S ribosome-binding GTPase CYPRO_RS07625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYPRO_RS07630 PF00011 Hsp20/alpha crystallin family CYPRO_RS07635 PF00012 Hsp70 protein CYPRO_RS07640 PF00871 Acetokinase family CYPRO_RS07645 PF00588 SpoU rRNA Methylase family CYPRO_RS07645 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYPRO_RS07655 PF00082 Subtilase family CYPRO_RS07685 PF01556 DnaJ C terminal domain CYPRO_RS07685 PF00226 DnaJ domain CYPRO_RS07695 PF00180 Isocitrate/isopropylmalate dehydrogenase CYPRO_RS07700 PF00535 Glycosyl transferase family 2 CYPRO_RS07710 PF11734 TilS substrate C-terminal domain CYPRO_RS07710 PF14437 MafB19-like deaminase CYPRO_RS07710 PF01171 PP-loop family CYPRO_RS07725 PF04389 Peptidase family M28 CYPRO_RS07725 PF01483 Proprotein convertase P-domain CYPRO_RS07730 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYPRO_RS07730 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYPRO_RS07735 PF00398 Ribosomal RNA adenine dimethylase CYPRO_RS07745 PF04235 Protein of unknown function (DUF418) CYPRO_RS07750 PF17760 UvrA interaction domain CYPRO_RS07750 PF17755 UvrA DNA-binding domain CYPRO_RS07755 PF01474 Class-II DAHP synthetase family CYPRO_RS07760 PF00011 Hsp20/alpha crystallin family CYPRO_RS07770 PF01063 Amino-transferase class IV CYPRO_RS07775 PF00117 Glutamine amidotransferase class-I CYPRO_RS07775 PF00425 chorismate binding enzyme CYPRO_RS07775 PF04715 Anthranilate synthase component I, N terminal region CYPRO_RS07785 PF01197 Ribosomal protein L31 CYPRO_RS07790 PF00753 Metallo-beta-lactamase superfamily CYPRO_RS07805 PF00158 Sigma-54 interaction domain CYPRO_RS07805 PF02954 Bacterial regulatory protein, Fis family CYPRO_RS07805 PF00072 Response regulator receiver domain CYPRO_RS07810 PF01938 TRAM domain CYPRO_RS07810 PF00919 Uncharacterized protein family UPF0004 CYPRO_RS07810 PF04055 Radical SAM superfamily CYPRO_RS07820 PF00156 Phosphoribosyl transferase domain CYPRO_RS07845 PF04608 Phosphatidylglycerophosphatase A CYPRO_RS07850 PF01066 CDP-alcohol phosphatidyltransferase CYPRO_RS07855 PF18146 Damage-inducible protein CinA KH domain CYPRO_RS07855 PF02464 Competence-damaged protein CYPRO_RS07855 PF00994 Probable molybdopterin binding domain CYPRO_RS07875 PF00664 ABC transporter transmembrane region CYPRO_RS07875 PF00005 ABC transporter CYPRO_RS07880 PF00534 Glycosyl transferases group 1 CYPRO_RS07880 PF13439 Glycosyltransferase Family 4 CYPRO_RS07905 PF01515 Phosphate acetyl/butaryl transferase CYPRO_RS07910 PF00128 Alpha amylase, catalytic domain CYPRO_RS07910 PF02903 Alpha amylase, N-terminal ig-like domain CYPRO_RS07910 PF16657 Maltogenic Amylase, C-terminal domain CYPRO_RS07915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS07915 PF00072 Response regulator receiver domain CYPRO_RS07915 PF01627 Hpt domain CYPRO_RS07915 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS07915 PF00672 HAMP domain CYPRO_RS07915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS07920 PF01458 Uncharacterized protein family (UPF0051) CYPRO_RS07925 PF00005 ABC transporter CYPRO_RS07930 PF01458 Uncharacterized protein family (UPF0051) CYPRO_RS07935 PF00266 Aminotransferase class-V CYPRO_RS07945 PF01106 NifU-like domain CYPRO_RS07950 PF01521 Iron-sulphur cluster biosynthesis CYPRO_RS07960 PF01070 FMN-dependent dehydrogenase CYPRO_RS07965 PF00348 Polyprenyl synthetase CYPRO_RS07975 PF01467 Cytidylyltransferase-like CYPRO_RS07980 PF14437 MafB19-like deaminase CYPRO_RS07985 PF00156 Phosphoribosyl transferase domain CYPRO_RS08010 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS08010 PF00072 Response regulator receiver domain CYPRO_RS08015 PF00588 SpoU rRNA Methylase family CYPRO_RS08020 PF01551 Peptidase family M23 CYPRO_RS08020 PF01476 LysM domain CYPRO_RS08025 PF08534 Redoxin CYPRO_RS08030 PF00814 Glycoprotease family CYPRO_RS08035 PF17848 Acetyl-coA carboxylase zinc finger domain CYPRO_RS08035 PF01039 Carboxyl transferase domain CYPRO_RS08040 PF01926 50S ribosome-binding GTPase CYPRO_RS08040 PF01018 GTP1/OBG CYPRO_RS08045 PF02481 DNA recombination-mediator protein A CYPRO_RS08045 PF17782 DprA winged helix domain CYPRO_RS08050 PF13581 Histidine kinase-like ATPase domain CYPRO_RS08055 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYPRO_RS08055 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYPRO_RS08060 PF00877 NlpC/P60 family CYPRO_RS08070 PF05188 MutS domain II CYPRO_RS08070 PF05192 MutS domain III CYPRO_RS08070 PF05190 MutS family domain IV CYPRO_RS08070 PF00488 MutS domain V CYPRO_RS08070 PF01624 MutS domain I CYPRO_RS08075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYPRO_RS08075 PF02403 Seryl-tRNA synthetase N-terminal domain CYPRO_RS08080 PF00202 Aminotransferase class-III CYPRO_RS08085 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CYPRO_RS08085 PF00326 Prolyl oligopeptidase family CYPRO_RS08090 PF02541 Ppx/GppA phosphatase family CYPRO_RS08095 PF07690 Major Facilitator Superfamily CYPRO_RS08105 PF05161 MOFRL family CYPRO_RS08105 PF13660 Domain of unknown function (DUF4147) CYPRO_RS08110 PF13519 von Willebrand factor type A domain CYPRO_RS08110 PF07584 Aerotolerance regulator N-terminal CYPRO_RS08120 PF07726 ATPase family associated with various cellular activities (AAA) CYPRO_RS08120 PF17863 AAA lid domain CYPRO_RS08125 PF09312 SurA N-terminal domain CYPRO_RS08125 PF00639 PPIC-type PPIASE domain CYPRO_RS08135 PF00639 PPIC-type PPIASE domain CYPRO_RS08135 PF09312 SurA N-terminal domain CYPRO_RS08140 PF07670 Nucleoside recognition CYPRO_RS08140 PF01773 Na+ dependent nucleoside transporter N-terminus CYPRO_RS08140 PF07662 Na+ dependent nucleoside transporter C-terminus CYPRO_RS08145 PF00265 Thymidine kinase CYPRO_RS08155 PF12833 Helix-turn-helix domain CYPRO_RS08155 PF07883 Cupin domain CYPRO_RS08160 PF11852 Domain of unknown function (DUF3372) CYPRO_RS08160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYPRO_RS08160 PF17967 Pullulanase N2 domain CYPRO_RS08160 PF03714 Bacterial pullanase-associated domain CYPRO_RS08160 PF18494 Pullulanase Ins domain CYPRO_RS08165 PF02261 Aspartate decarboxylase CYPRO_RS08175 PF08463 EcoEI R protein C-terminal CYPRO_RS08175 PF00271 Helicase conserved C-terminal domain CYPRO_RS08175 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CYPRO_RS08175 PF04851 Type III restriction enzyme, res subunit CYPRO_RS08225 PF00005 ABC transporter CYPRO_RS08235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYPRO_RS08235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYPRO_RS08235 PF11890 Domain of unknown function (DUF3410) CYPRO_RS08245 PF00591 Glycosyl transferase family, a/b domain CYPRO_RS08245 PF02885 Glycosyl transferase family, helical bundle domain CYPRO_RS08245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CYPRO_RS08265 PF00378 Enoyl-CoA hydratase/isomerase CYPRO_RS08270 PF03471 Transporter associated domain CYPRO_RS08270 PF00571 CBS domain CYPRO_RS08285 PF03481 Putative GTP-binding controlling metal-binding CYPRO_RS08285 PF01300 Telomere recombination CYPRO_RS08295 PF13438 Domain of unknown function (DUF4113) CYPRO_RS08295 PF00817 impB/mucB/samB family CYPRO_RS08295 PF11799 impB/mucB/samB family C-terminal domain CYPRO_RS08300 PF00717 Peptidase S24-like CYPRO_RS08310 PF00378 Enoyl-CoA hydratase/isomerase CYPRO_RS08320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYPRO_RS08320 PF16582 Middle domain of thiamine pyrophosphate CYPRO_RS08320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYPRO_RS08325 PF00425 chorismate binding enzyme CYPRO_RS08345 PF02687 FtsX-like permease family CYPRO_RS08345 PF12704 MacB-like periplasmic core domain CYPRO_RS08350 PF00005 ABC transporter CYPRO_RS08360 PF17384 RimP C-terminal SH3 domain CYPRO_RS08360 PF02576 RimP N-terminal domain CYPRO_RS08365 PF13184 NusA-like KH domain CYPRO_RS08365 PF08529 NusA N-terminal domain CYPRO_RS08365 PF00575 S1 RNA binding domain CYPRO_RS08370 PF04760 Translation initiation factor IF-2, N-terminal region CYPRO_RS08370 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS08370 PF11987 Translation-initiation factor 2 CYPRO_RS08370 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS08370 PF11987 Translation-initiation factor 2 CYPRO_RS08370 PF04760 Translation initiation factor IF-2, N-terminal region CYPRO_RS08375 PF02033 Ribosome-binding factor A CYPRO_RS08380 PF16198 tRNA pseudouridylate synthase B C-terminal domain CYPRO_RS08380 PF01509 TruB family pseudouridylate synthase (N terminal domain) CYPRO_RS08380 PF09142 tRNA Pseudouridine synthase II, C terminal CYPRO_RS08385 PF06574 FAD synthetase CYPRO_RS08385 PF01687 Riboflavin kinase CYPRO_RS08390 PF00312 Ribosomal protein S15 CYPRO_RS08395 PF00575 S1 RNA binding domain CYPRO_RS08395 PF01138 3' exoribonuclease family, domain 1 CYPRO_RS08395 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CYPRO_RS08395 PF00013 KH domain CYPRO_RS08395 PF03725 3' exoribonuclease family, domain 2 CYPRO_RS08400 PF05193 Peptidase M16 inactive domain CYPRO_RS08400 PF00675 Insulinase (Peptidase family M16) CYPRO_RS08405 PF00152 tRNA synthetases class II (D, K and N) CYPRO_RS08405 PF01336 OB-fold nucleic acid binding domain CYPRO_RS08415 PF08281 Sigma-70, region 4 CYPRO_RS08415 PF04542 Sigma-70 region 2 CYPRO_RS08435 PF01235 Sodium:alanine symporter family CYPRO_RS08440 PF00216 Bacterial DNA-binding protein CYPRO_RS08460 PF01202 Shikimate kinase CYPRO_RS08465 PF01761 3-dehydroquinate synthase CYPRO_RS08475 PF00575 S1 RNA binding domain CYPRO_RS08475 PF00773 RNB domain CYPRO_RS08475 PF17876 Cold shock domain CYPRO_RS08475 PF08206 Ribonuclease B OB domain CYPRO_RS08500 PF02233 NAD(P) transhydrogenase beta subunit CYPRO_RS08505 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CYPRO_RS08510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYPRO_RS08510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYPRO_RS08515 PF00107 Zinc-binding dehydrogenase CYPRO_RS08515 PF08240 Alcohol dehydrogenase GroES-like domain CYPRO_RS08525 PF01479 S4 domain CYPRO_RS08525 PF00849 RNA pseudouridylate synthase CYPRO_RS08530 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS08530 PF00072 Response regulator receiver domain CYPRO_RS08530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS08530 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS08530 PF01627 Hpt domain CYPRO_RS08530 PF00672 HAMP domain CYPRO_RS08540 PF01790 Prolipoprotein diacylglyceryl transferase CYPRO_RS08545 PF01406 tRNA synthetases class I (C) catalytic domain CYPRO_RS08545 PF09190 DALR domain CYPRO_RS08565 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CYPRO_RS08570 PF02601 Exonuclease VII, large subunit CYPRO_RS08570 PF13742 OB-fold nucleic acid binding domain CYPRO_RS08575 PF01370 NAD dependent epimerase/dehydratase family CYPRO_RS08580 PF00155 Aminotransferase class I and II CYPRO_RS08590 PF00672 HAMP domain CYPRO_RS08590 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS08595 PF03971 Monomeric isocitrate dehydrogenase CYPRO_RS08600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYPRO_RS08600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYPRO_RS08605 PF01464 Transglycosylase SLT domain CYPRO_RS08605 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYPRO_RS08635 PF01502 Phosphoribosyl-AMP cyclohydrolase CYPRO_RS08635 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CYPRO_RS08640 PF00977 Histidine biosynthesis protein CYPRO_RS08645 PF13519 von Willebrand factor type A domain CYPRO_RS08655 PF01882 Protein of unknown function DUF58 CYPRO_RS08660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CYPRO_RS08660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CYPRO_RS08665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYPRO_RS08665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYPRO_RS08665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYPRO_RS08665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYPRO_RS08670 PF13439 Glycosyltransferase Family 4 CYPRO_RS08670 PF00534 Glycosyl transferases group 1 CYPRO_RS08700 PF00005 ABC transporter CYPRO_RS08705 PF13277 YmdB-like protein CYPRO_RS08720 PF03484 tRNA synthetase B5 domain CYPRO_RS08720 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CYPRO_RS08720 PF01588 Putative tRNA binding domain CYPRO_RS08720 PF03147 Ferredoxin-fold anticodon binding domain CYPRO_RS08720 PF03483 B3/4 domain CYPRO_RS08725 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CYPRO_RS08725 PF01409 tRNA synthetases class II core domain (F) CYPRO_RS08730 PF00453 Ribosomal protein L20 CYPRO_RS08735 PF01632 Ribosomal protein L35 CYPRO_RS08740 PF05198 Translation initiation factor IF-3, N-terminal domain CYPRO_RS08740 PF00707 Translation initiation factor IF-3, C-terminal domain CYPRO_RS08745 PF03129 Anticodon binding domain CYPRO_RS08745 PF02824 TGS domain CYPRO_RS08745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYPRO_RS08745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYPRO_RS08760 PF01593 Flavin containing amine oxidoreductase CYPRO_RS08765 PF00005 ABC transporter CYPRO_RS08765 PF00664 ABC transporter transmembrane region CYPRO_RS08770 PF12706 Beta-lactamase superfamily domain CYPRO_RS08770 PF00753 Metallo-beta-lactamase superfamily CYPRO_RS08775 PF00664 ABC transporter transmembrane region CYPRO_RS08775 PF00005 ABC transporter CYPRO_RS08780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYPRO_RS08785 PF02272 DHHA1 domain CYPRO_RS08785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYPRO_RS08785 PF01411 tRNA synthetases class II (A) CYPRO_RS08790 PF00676 Dehydrogenase E1 component CYPRO_RS08795 PF02779 Transketolase, pyrimidine binding domain CYPRO_RS08795 PF02780 Transketolase, C-terminal domain CYPRO_RS08800 PF02817 e3 binding domain CYPRO_RS08800 PF00364 Biotin-requiring enzyme CYPRO_RS08800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYPRO_RS08805 PF04321 RmlD substrate binding domain CYPRO_RS08810 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CYPRO_RS08815 PF16363 GDP-mannose 4,6 dehydratase CYPRO_RS08830 PF00072 Response regulator receiver domain CYPRO_RS08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS08830 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS08830 PF09308 LuxQ, periplasmic CYPRO_RS08835 PF00072 Response regulator receiver domain CYPRO_RS08845 PF01475 Ferric uptake regulator family CYPRO_RS08850 PF04715 Anthranilate synthase component I, N terminal region CYPRO_RS08850 PF00425 chorismate binding enzyme CYPRO_RS08855 PF00579 tRNA synthetases class I (W and Y) CYPRO_RS08860 PF02885 Glycosyl transferase family, helical bundle domain CYPRO_RS08860 PF00591 Glycosyl transferase family, a/b domain CYPRO_RS08860 PF00117 Glutamine amidotransferase class-I CYPRO_RS08865 PF02885 Glycosyl transferase family, helical bundle domain CYPRO_RS08865 PF00591 Glycosyl transferase family, a/b domain CYPRO_RS08870 PF00218 Indole-3-glycerol phosphate synthase CYPRO_RS08875 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CYPRO_RS08900 PF00149 Calcineurin-like phosphoesterase CYPRO_RS08900 PF02872 5'-nucleotidase, C-terminal domain CYPRO_RS08905 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYPRO_RS08905 PF13288 DXP reductoisomerase C-terminal domain CYPRO_RS08905 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CYPRO_RS08910 PF17820 PDZ domain CYPRO_RS08910 PF02163 Peptidase family M50 CYPRO_RS08915 PF02666 Phosphatidylserine decarboxylase CYPRO_RS08920 PF01066 CDP-alcohol phosphatidyltransferase CYPRO_RS08930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYPRO_RS08940 PF01613 Flavin reductase like domain CYPRO_RS08950 PF01596 O-methyltransferase CYPRO_RS08955 PF00106 short chain dehydrogenase CYPRO_RS08960 PF04055 Radical SAM superfamily CYPRO_RS08965 PF01242 6-pyruvoyl tetrahydropterin synthase CYPRO_RS08975 PF03458 UPF0126 domain CYPRO_RS08980 PF00209 Sodium:neurotransmitter symporter family CYPRO_RS08985 PF01433 Peptidase family M1 domain CYPRO_RS08985 PF11838 ERAP1-like C-terminal domain CYPRO_RS09000 PF02130 Uncharacterized protein family UPF0054 CYPRO_RS09015 PF04286 Protein of unknown function (DUF445) CYPRO_RS09030 PF01979 Amidohydrolase family CYPRO_RS09030 PF13382 Adenine deaminase C-terminal domain CYPRO_RS09045 PF13382 Adenine deaminase C-terminal domain CYPRO_RS09045 PF01979 Amidohydrolase family CYPRO_RS09050 PF00881 Nitroreductase family CYPRO_RS09085 PF01642 Methylmalonyl-CoA mutase CYPRO_RS09085 PF02310 B12 binding domain CYPRO_RS09100 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CYPRO_RS09100 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CYPRO_RS09100 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CYPRO_RS09105 PF00857 Isochorismatase family CYPRO_RS09130 PF08281 Sigma-70, region 4 CYPRO_RS09130 PF04542 Sigma-70 region 2 CYPRO_RS09135 PF00005 ABC transporter CYPRO_RS09135 PF12848 ABC transporter CYPRO_RS09145 PF08331 Domain of unknown function (DUF1730) CYPRO_RS09160 PF17820 PDZ domain CYPRO_RS09160 PF13180 PDZ domain CYPRO_RS09165 PF02565 Recombination protein O C terminal CYPRO_RS09165 PF11967 Recombination protein O N terminal CYPRO_RS09170 PF03176 MMPL family CYPRO_RS09175 PF10410 DnaB-helicase binding domain of primase CYPRO_RS09175 PF01807 CHC2 zinc finger CYPRO_RS09175 PF08275 DNA primase catalytic core, N-terminal domain CYPRO_RS09180 PF00266 Aminotransferase class-V CYPRO_RS09185 PF03631 Virulence factor BrkB CYPRO_RS09195 PF01243 Pyridoxamine 5'-phosphate oxidase CYPRO_RS09195 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CYPRO_RS09200 PF01207 Dihydrouridine synthase (Dus) CYPRO_RS09205 PF01791 DeoC/LacD family aldolase CYPRO_RS09210 PF03060 Nitronate monooxygenase CYPRO_RS09220 PF00474 Sodium:solute symporter family CYPRO_RS09225 PF02673 Bacitracin resistance protein BacA CYPRO_RS09240 PF00290 Tryptophan synthase alpha chain CYPRO_RS09245 PF00291 Pyridoxal-phosphate dependent enzyme CYPRO_RS09255 PF00155 Aminotransferase class I and II CYPRO_RS09265 PF00719 Inorganic pyrophosphatase CYPRO_RS09270 PF10079 Bacillithiol biosynthesis BshC CYPRO_RS09275 PF02577 Bifunctional nuclease CYPRO_RS09280 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CYPRO_RS09285 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CYPRO_RS09290 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CYPRO_RS09295 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CYPRO_RS09305 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CYPRO_RS09305 PF10531 SLBB domain CYPRO_RS09305 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CYPRO_RS09310 PF00384 Molybdopterin oxidoreductase CYPRO_RS09310 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CYPRO_RS09310 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CYPRO_RS09315 PF00146 NADH dehydrogenase CYPRO_RS09325 PF18030 RimK PreATP-grasp domain CYPRO_RS09325 PF08443 RimK-like ATP-grasp domain CYPRO_RS09335 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYPRO_RS09335 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYPRO_RS09350 PF00106 short chain dehydrogenase CYPRO_RS09355 PF01243 Pyridoxamine 5'-phosphate oxidase CYPRO_RS09355 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CYPRO_RS09360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYPRO_RS09360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYPRO_RS09360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYPRO_RS09360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYPRO_RS09370 PF05525 Branched-chain amino acid transport protein CYPRO_RS09375 PF00990 Diguanylate cyclase, GGDEF domain CYPRO_RS09375 PF00563 EAL domain CYPRO_RS09375 PF05231 MASE1 CYPRO_RS09375 PF08447 PAS fold CYPRO_RS09375 PF13426 PAS domain CYPRO_RS09375 PF08448 PAS fold CYPRO_RS09380 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS09380 PF01590 GAF domain CYPRO_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS09380 PF00360 Phytochrome region CYPRO_RS09380 PF08446 PAS fold CYPRO_RS09385 PF01339 CheB methylesterase CYPRO_RS09385 PF00072 Response regulator receiver domain CYPRO_RS09390 PF00072 Response regulator receiver domain CYPRO_RS09390 PF01584 CheW-like domain CYPRO_RS09390 PF01627 Hpt domain CYPRO_RS09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS09395 PF02743 Cache domain CYPRO_RS09395 PF00672 HAMP domain CYPRO_RS09395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CYPRO_RS09400 PF01584 CheW-like domain CYPRO_RS09405 PF03705 CheR methyltransferase, all-alpha domain CYPRO_RS09405 PF01739 CheR methyltransferase, SAM binding domain CYPRO_RS09430 PF01979 Amidohydrolase family CYPRO_RS09460 PF00072 Response regulator receiver domain CYPRO_RS09460 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS09465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS09465 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS09465 PF08448 PAS fold CYPRO_RS09465 PF13426 PAS domain CYPRO_RS09465 PF00072 Response regulator receiver domain CYPRO_RS09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS09485 PF07494 Two component regulator propeller CYPRO_RS09485 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS09485 PF00072 Response regulator receiver domain CYPRO_RS09485 PF12833 Helix-turn-helix domain CYPRO_RS09485 PF07495 Y_Y_Y domain CYPRO_RS09495 PF00392 Bacterial regulatory proteins, gntR family CYPRO_RS09495 PF07702 UTRA domain CYPRO_RS09510 PF00753 Metallo-beta-lactamase superfamily CYPRO_RS09515 PF01740 STAS domain CYPRO_RS09515 PF00916 Sulfate permease family CYPRO_RS09520 PF02080 TrkA-C domain CYPRO_RS09520 PF03600 Citrate transporter CYPRO_RS09525 PF17773 UPF0176 acylphosphatase like domain CYPRO_RS09525 PF12368 Rhodanase C-terminal CYPRO_RS09525 PF00581 Rhodanese-like domain CYPRO_RS09530 PF12704 MacB-like periplasmic core domain CYPRO_RS09530 PF02687 FtsX-like permease family CYPRO_RS09545 PF00549 CoA-ligase CYPRO_RS09545 PF02629 CoA binding domain CYPRO_RS09580 PF00175 Oxidoreductase NAD-binding domain CYPRO_RS09585 PF03461 TRCF domain CYPRO_RS09585 PF00271 Helicase conserved C-terminal domain CYPRO_RS09585 PF17757 UvrB interaction domain CYPRO_RS09585 PF00270 DEAD/DEAH box helicase CYPRO_RS09585 PF02559 CarD-like/TRCF domain CYPRO_RS09620 PF00440 Bacterial regulatory proteins, tetR family CYPRO_RS09635 PF00535 Glycosyl transferase family 2 CYPRO_RS09635 PF01501 Glycosyl transferase family 8 CYPRO_RS09640 PF00589 Phage integrase family CYPRO_RS09640 PF02899 Phage integrase, N-terminal SAM-like domain CYPRO_RS09650 PF02603 HPr Serine kinase N terminus CYPRO_RS09650 PF07475 HPr Serine kinase C-terminal domain CYPRO_RS09655 PF00474 Sodium:solute symporter family CYPRO_RS09660 PF01979 Amidohydrolase family CYPRO_RS09670 PF01641 SelR domain CYPRO_RS09675 PF01979 Amidohydrolase family CYPRO_RS09680 PF01979 Amidohydrolase family CYPRO_RS09685 PF08808 RES domain CYPRO_RS09700 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CYPRO_RS09705 PF03447 Homoserine dehydrogenase, NAD binding domain CYPRO_RS09705 PF01842 ACT domain CYPRO_RS09705 PF00742 Homoserine dehydrogenase CYPRO_RS09705 PF13840 ACT domain CYPRO_RS09705 PF00696 Amino acid kinase family CYPRO_RS09710 PF00288 GHMP kinases N terminal domain CYPRO_RS09710 PF08544 GHMP kinases C terminal CYPRO_RS09715 PF00291 Pyridoxal-phosphate dependent enzyme CYPRO_RS09715 PF14821 Threonine synthase N terminus CYPRO_RS09720 PF00326 Prolyl oligopeptidase family CYPRO_RS09720 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CYPRO_RS09735 PF06874 Firmicute fructose-1,6-bisphosphatase CYPRO_RS09745 PF00270 DEAD/DEAH box helicase CYPRO_RS09745 PF09382 RQC domain CYPRO_RS09745 PF16124 RecQ zinc-binding CYPRO_RS09745 PF00570 HRDC domain CYPRO_RS09745 PF00271 Helicase conserved C-terminal domain CYPRO_RS09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS09750 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS09750 PF09456 RcsC Alpha-Beta-Loop (ABL) CYPRO_RS09750 PF00072 Response regulator receiver domain CYPRO_RS09755 PF00535 Glycosyl transferase family 2 CYPRO_RS09755 PF00534 Glycosyl transferases group 1 CYPRO_RS09760 PF00578 AhpC/TSA family CYPRO_RS09765 PF00226 DnaJ domain CYPRO_RS09765 PF01556 DnaJ C terminal domain CYPRO_RS09765 PF00684 DnaJ central domain CYPRO_RS09770 PF01025 GrpE CYPRO_RS09780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYPRO_RS09785 PF00795 Carbon-nitrogen hydrolase CYPRO_RS09815 PF00271 Helicase conserved C-terminal domain CYPRO_RS09815 PF18337 RapA N-terminal Tudor like domain CYPRO_RS09815 PF18339 RapA N-terminal Tudor like domain 1 CYPRO_RS09815 PF00176 SNF2 family N-terminal domain CYPRO_RS09815 PF12137 RNA polymerase recycling family C-terminal CYPRO_RS09820 PF00270 DEAD/DEAH box helicase CYPRO_RS09820 PF09369 Domain of unknown function (DUF1998) CYPRO_RS09820 PF00271 Helicase conserved C-terminal domain CYPRO_RS09840 PF16363 GDP-mannose 4,6 dehydratase CYPRO_RS09845 PF00355 Rieske [2Fe-2S] domain CYPRO_RS09845 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CYPRO_RS09850 PF00474 Sodium:solute symporter family CYPRO_RS09860 PF00890 FAD binding domain CYPRO_RS09875 PF01204 Trehalase CYPRO_RS09880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYPRO_RS09880 PF09317 Domain of unknown function (DUF1974) CYPRO_RS09880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYPRO_RS09880 PF02770 Acyl-CoA dehydrogenase, middle domain CYPRO_RS09885 PF02803 Thiolase, C-terminal domain CYPRO_RS09885 PF00108 Thiolase, N-terminal domain CYPRO_RS09890 PF00378 Enoyl-CoA hydratase/isomerase CYPRO_RS09890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYPRO_RS09890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYPRO_RS09905 PF00465 Iron-containing alcohol dehydrogenase CYPRO_RS09905 PF00171 Aldehyde dehydrogenase family CYPRO_RS09910 PF00465 Iron-containing alcohol dehydrogenase CYPRO_RS09920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS09920 PF00672 HAMP domain CYPRO_RS09920 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS09920 PF01627 Hpt domain CYPRO_RS09920 PF00072 Response regulator receiver domain CYPRO_RS09920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS09925 PF01212 Beta-eliminating lyase CYPRO_RS09930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CYPRO_RS09930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CYPRO_RS09935 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYPRO_RS09935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYPRO_RS09940 PF01804 Penicillin amidase CYPRO_RS09950 PF00933 Glycosyl hydrolase family 3 N terminal domain CYPRO_RS09950 PF01915 Glycosyl hydrolase family 3 C-terminal domain CYPRO_RS09970 PF00149 Calcineurin-like phosphoesterase CYPRO_RS09970 PF02872 5'-nucleotidase, C-terminal domain CYPRO_RS09985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYPRO_RS09990 PF02567 Phenazine biosynthesis-like protein CYPRO_RS10000 PF00501 AMP-binding enzyme CYPRO_RS10005 PF03061 Thioesterase superfamily CYPRO_RS10020 PF01966 HD domain CYPRO_RS10040 PF18073 Rubredoxin metal binding domain CYPRO_RS10045 PF00535 Glycosyl transferase family 2 CYPRO_RS10055 PF02780 Transketolase, C-terminal domain CYPRO_RS10055 PF02779 Transketolase, pyrimidine binding domain CYPRO_RS10065 PF02675 S-adenosylmethionine decarboxylase CYPRO_RS10075 PF17284 Spermidine synthase tetramerisation domain CYPRO_RS10115 PF07495 Y_Y_Y domain CYPRO_RS10115 PF07494 Two component regulator propeller CYPRO_RS10115 PF12833 Helix-turn-helix domain CYPRO_RS10115 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS10115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS10115 PF00072 Response regulator receiver domain CYPRO_RS10120 PF13005 zinc-finger binding domain of transposase IS66 CYPRO_RS10120 PF13007 Transposase C of IS166 homeodomain CYPRO_RS10120 PF13817 IS66 C-terminal element CYPRO_RS10120 PF03050 Transposase IS66 family CYPRO_RS10135 PF00672 HAMP domain CYPRO_RS10135 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS10135 PF01627 Hpt domain CYPRO_RS10135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS10135 PF00072 Response regulator receiver domain CYPRO_RS10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS10155 PF00580 UvrD/REP helicase N-terminal domain CYPRO_RS10155 PF13361 UvrD-like helicase C-terminal domain CYPRO_RS10170 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS10170 PF05362 Lon protease (S16) C-terminal proteolytic domain CYPRO_RS10170 PF02190 ATP-dependent protease La (LON) substrate-binding domain CYPRO_RS10175 PF03193 RsgA GTPase CYPRO_RS10175 PF16745 RsgA N-terminal domain CYPRO_RS10185 PF13520 Amino acid permease CYPRO_RS10190 PF01791 DeoC/LacD family aldolase CYPRO_RS10195 PF00171 Aldehyde dehydrogenase family CYPRO_RS10200 PF00171 Aldehyde dehydrogenase family CYPRO_RS10225 PF02384 N-6 DNA Methylase CYPRO_RS10235 PF00237 Ribosomal protein L22p/L17e CYPRO_RS10240 PF01420 Type I restriction modification DNA specificity domain CYPRO_RS10270 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS10270 PF00593 TonB dependent receptor CYPRO_RS10275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYPRO_RS10275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYPRO_RS10295 PF00106 short chain dehydrogenase CYPRO_RS10300 PF00082 Subtilase family CYPRO_RS10310 PF04052 TolB amino-terminal domain CYPRO_RS10310 PF07676 WD40-like Beta Propeller Repeat CYPRO_RS10315 PF03976 Polyphosphate kinase 2 (PPK2) CYPRO_RS10325 PF07676 WD40-like Beta Propeller Repeat CYPRO_RS10325 PF00326 Prolyl oligopeptidase family CYPRO_RS10325 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CYPRO_RS10330 PF03309 Type III pantothenate kinase CYPRO_RS10335 PF00106 short chain dehydrogenase CYPRO_RS10360 PF13580 SIS domain CYPRO_RS10365 PF00289 Biotin carboxylase, N-terminal domain CYPRO_RS10365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYPRO_RS10365 PF02785 Biotin carboxylase C-terminal domain CYPRO_RS10380 PF00356 Bacterial regulatory proteins, lacI family CYPRO_RS10385 PF01259 SAICAR synthetase CYPRO_RS10390 PF01734 Patatin-like phospholipase CYPRO_RS10395 PF04461 Protein of unknown function (DUF520) CYPRO_RS10410 PF08676 MutL C terminal dimerisation domain CYPRO_RS10410 PF01119 DNA mismatch repair protein, C-terminal domain CYPRO_RS10425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYPRO_RS10425 PF02844 Phosphoribosylglycinamide synthetase, N domain CYPRO_RS10425 PF02843 Phosphoribosylglycinamide synthetase, C domain CYPRO_RS10430 PF00121 Triosephosphate isomerase CYPRO_RS10440 PF02637 GatB domain CYPRO_RS10440 PF02934 GatB/GatE catalytic domain CYPRO_RS10445 PF04371 Porphyromonas-type peptidyl-arginine deiminase CYPRO_RS10450 PF00795 Carbon-nitrogen hydrolase CYPRO_RS10450 PF02540 NAD synthase CYPRO_RS10460 PF00144 Beta-lactamase CYPRO_RS10460 PF07930 D-aminopeptidase, domain B CYPRO_RS10495 PF00873 AcrB/AcrD/AcrF family CYPRO_RS10510 PF01022 Bacterial regulatory protein, arsR family CYPRO_RS10520 PF00571 CBS domain CYPRO_RS10520 PF00291 Pyridoxal-phosphate dependent enzyme CYPRO_RS10525 PF08486 Stage II sporulation protein CYPRO_RS10535 PF01121 Dephospho-CoA kinase CYPRO_RS10540 PF02910 Fumarate reductase flavoprotein C-term CYPRO_RS10540 PF00890 FAD binding domain CYPRO_RS10545 PF00472 RF-1 domain CYPRO_RS10545 PF03462 PCRF domain CYPRO_RS10555 PF00459 Inositol monophosphatase family CYPRO_RS10560 PF03167 Uracil DNA glycosylase superfamily CYPRO_RS10565 PF03796 DnaB-like helicase C terminal domain CYPRO_RS10565 PF00772 DnaB-like helicase N terminal domain CYPRO_RS10595 PF01380 SIS domain CYPRO_RS10595 PF01418 Helix-turn-helix domain, rpiR family CYPRO_RS10600 PF03575 Peptidase family S51 CYPRO_RS10630 PF04055 Radical SAM superfamily CYPRO_RS10635 PF03825 Nucleoside H+ symporter CYPRO_RS10640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYPRO_RS10640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYPRO_RS10655 PF17946 RecC C-terminal domain CYPRO_RS10660 PF13361 UvrD-like helicase C-terminal domain CYPRO_RS10660 PF00580 UvrD/REP helicase N-terminal domain CYPRO_RS10660 PF12705 PD-(D/E)XK nuclease superfamily CYPRO_RS10665 PF13538 UvrD-like helicase C-terminal domain CYPRO_RS10675 PF09382 RQC domain CYPRO_RS10675 PF00270 DEAD/DEAH box helicase CYPRO_RS10675 PF00271 Helicase conserved C-terminal domain CYPRO_RS10675 PF00570 HRDC domain CYPRO_RS10675 PF16124 RecQ zinc-binding CYPRO_RS10680 PF03462 PCRF domain CYPRO_RS10680 PF00472 RF-1 domain CYPRO_RS10685 PF02222 ATP-grasp domain CYPRO_RS10685 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CYPRO_RS10685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYPRO_RS10690 PF00731 AIR carboxylase CYPRO_RS10710 PF01274 Malate synthase CYPRO_RS10715 PF00463 Isocitrate lyase family CYPRO_RS10720 PF01926 50S ribosome-binding GTPase CYPRO_RS10720 PF06071 Protein of unknown function (DUF933) CYPRO_RS10725 PF00149 Calcineurin-like phosphoesterase CYPRO_RS10730 PF01029 NusB family CYPRO_RS10750 PF01432 Peptidase family M3 CYPRO_RS10755 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CYPRO_RS10755 PF07676 WD40-like Beta Propeller Repeat CYPRO_RS10755 PF00326 Prolyl oligopeptidase family CYPRO_RS10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS10775 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS10775 PF08448 PAS fold CYPRO_RS10775 PF13426 PAS domain CYPRO_RS10775 PF00072 Response regulator receiver domain CYPRO_RS10780 PF00072 Response regulator receiver domain CYPRO_RS10780 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS10785 PF00929 Exonuclease CYPRO_RS10810 PF04820 Tryptophan halogenase CYPRO_RS10815 PF00144 Beta-lactamase CYPRO_RS10820 PF18273 Type III R-M EcoP15I C-terminal domain CYPRO_RS10820 PF01555 DNA methylase CYPRO_RS10860 PF07581 The GLUG motif CYPRO_RS10860 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) CYPRO_RS10870 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS10870 PF00072 Response regulator receiver domain CYPRO_RS10870 PF13426 PAS domain CYPRO_RS10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS10870 PF08448 PAS fold CYPRO_RS10900 PF17785 PUA-like domain CYPRO_RS10900 PF10672 S-adenosylmethionine-dependent methyltransferase CYPRO_RS10915 PF04452 RNA methyltransferase CYPRO_RS10930 PF08459 UvrC Helix-hairpin-helix N-terminal CYPRO_RS10930 PF02151 UvrB/uvrC motif CYPRO_RS10930 PF01541 GIY-YIG catalytic domain CYPRO_RS10935 PF00842 Alanine racemase, C-terminal domain CYPRO_RS10935 PF01168 Alanine racemase, N-terminal domain CYPRO_RS10940 PF13847 Methyltransferase domain CYPRO_RS10970 PF01039 Carboxyl transferase domain CYPRO_RS10980 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CYPRO_RS10990 PF00005 ABC transporter CYPRO_RS10995 PF01520 N-acetylmuramoyl-L-alanine amidase CYPRO_RS11000 PF00485 Phosphoribulokinase / Uridine kinase family CYPRO_RS11015 PF13193 AMP-binding enzyme C-terminal domain CYPRO_RS11015 PF16177 Acetyl-coenzyme A synthetase N-terminus CYPRO_RS11015 PF00501 AMP-binding enzyme CYPRO_RS11020 PF00474 Sodium:solute symporter family CYPRO_RS11060 PF00578 AhpC/TSA family CYPRO_RS11080 PF12838 4Fe-4S dicluster domain CYPRO_RS11085 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CYPRO_RS11085 PF01926 50S ribosome-binding GTPase CYPRO_RS11095 PF00580 UvrD/REP helicase N-terminal domain CYPRO_RS11095 PF13361 UvrD-like helicase C-terminal domain CYPRO_RS11110 PF01416 tRNA pseudouridine synthase CYPRO_RS11120 PF01578 Cytochrome C assembly protein CYPRO_RS11120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CYPRO_RS11135 PF01578 Cytochrome C assembly protein CYPRO_RS11145 PF00692 dUTPase CYPRO_RS11170 PF00364 Biotin-requiring enzyme CYPRO_RS11175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYPRO_RS11180 PF10150 Ribonuclease E/G family CYPRO_RS11180 PF00575 S1 RNA binding domain CYPRO_RS11185 PF00227 Proteasome subunit CYPRO_RS11190 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS11190 PF07724 AAA domain (Cdc48 subfamily) CYPRO_RS11190 PF10431 C-terminal, D2-small domain, of ClpB protein CYPRO_RS11195 PF13180 PDZ domain CYPRO_RS11195 PF03572 Peptidase family S41 CYPRO_RS11200 PF00561 alpha/beta hydrolase fold CYPRO_RS11205 PF04055 Radical SAM superfamily CYPRO_RS11215 PF02390 Putative methyltransferase CYPRO_RS11220 PF12848 ABC transporter CYPRO_RS11220 PF00005 ABC transporter CYPRO_RS11220 PF16326 ABC transporter C-terminal domain CYPRO_RS11225 PF01165 Ribosomal protein S21 CYPRO_RS11235 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CYPRO_RS11235 PF00326 Prolyl oligopeptidase family CYPRO_RS11235 PF07676 WD40-like Beta Propeller Repeat CYPRO_RS11260 PF00912 Transglycosylase CYPRO_RS11260 PF17092 Penicillin-binding protein OB-like domain CYPRO_RS11260 PF00905 Penicillin binding protein transpeptidase domain CYPRO_RS11265 PF00149 Calcineurin-like phosphoesterase CYPRO_RS11275 PF00348 Polyprenyl synthetase CYPRO_RS11280 PF00365 Phosphofructokinase CYPRO_RS11285 PF00342 Phosphoglucose isomerase CYPRO_RS11290 PF01712 Deoxynucleoside kinase CYPRO_RS11300 PF01783 Ribosomal L32p protein family CYPRO_RS11305 PF02504 Fatty acid synthesis protein CYPRO_RS11310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYPRO_RS11310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYPRO_RS11315 PF00698 Acyl transferase domain CYPRO_RS11325 PF00550 Phosphopantetheine attachment site CYPRO_RS11330 PF02801 Beta-ketoacyl synthase, C-terminal domain CYPRO_RS11330 PF00109 Beta-ketoacyl synthase, N-terminal domain CYPRO_RS11335 PF14622 Ribonuclease-III-like CYPRO_RS11335 PF00035 Double-stranded RNA binding motif CYPRO_RS11340 PF01063 Amino-transferase class IV CYPRO_RS11345 PF00303 Thymidylate synthase CYPRO_RS11350 PF00186 Dihydrofolate reductase CYPRO_RS11355 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CYPRO_RS11355 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CYPRO_RS11360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYPRO_RS11360 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYPRO_RS11365 PF01029 NusB family CYPRO_RS11365 PF01189 16S rRNA methyltransferase RsmB/F CYPRO_RS11370 PF00133 tRNA synthetases class I (I, L, M and V) CYPRO_RS11370 PF08264 Anticodon-binding domain of tRNA CYPRO_RS11370 PF10458 Valyl tRNA synthetase tRNA binding arm CYPRO_RS11380 PF02649 Type I GTP cyclohydrolase folE2 CYPRO_RS11390 PF01565 FAD binding domain CYPRO_RS11390 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CYPRO_RS11395 PF00246 Zinc carboxypeptidase CYPRO_RS11400 PF00282 Pyridoxal-dependent decarboxylase conserved domain CYPRO_RS11410 PF00156 Phosphoribosyl transferase domain CYPRO_RS11435 PF02347 Glycine cleavage system P-protein CYPRO_RS11445 PF05343 M42 glutamyl aminopeptidase CYPRO_RS11450 PF00501 AMP-binding enzyme CYPRO_RS11455 PF01475 Ferric uptake regulator family CYPRO_RS11460 PF17191 RecG wedge domain CYPRO_RS11460 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CYPRO_RS11460 PF00270 DEAD/DEAH box helicase CYPRO_RS11475 PF18075 FtsX extracellular domain CYPRO_RS11475 PF02687 FtsX-like permease family CYPRO_RS11480 PF00118 TCP-1/cpn60 chaperonin family CYPRO_RS11485 PF00166 Chaperonin 10 Kd subunit CYPRO_RS11490 PF01053 Cys/Met metabolism PLP-dependent enzyme CYPRO_RS11495 PF00561 alpha/beta hydrolase fold CYPRO_RS11500 PF03447 Homoserine dehydrogenase, NAD binding domain CYPRO_RS11500 PF00742 Homoserine dehydrogenase CYPRO_RS11500 PF00696 Amino acid kinase family CYPRO_RS11500 PF01842 ACT domain CYPRO_RS11500 PF13840 ACT domain CYPRO_RS11545 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS11545 PF00593 TonB dependent receptor CYPRO_RS11580 PF00128 Alpha amylase, catalytic domain CYPRO_RS11590 PF00474 Sodium:solute symporter family CYPRO_RS11605 PF00356 Bacterial regulatory proteins, lacI family CYPRO_RS11615 PF02811 PHP domain CYPRO_RS11615 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYPRO_RS11615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYPRO_RS11615 PF01336 OB-fold nucleic acid binding domain CYPRO_RS11615 PF14579 Helix-hairpin-helix motif CYPRO_RS11620 PF00085 Thioredoxin CYPRO_RS11630 PF04552 Sigma-54, DNA binding domain CYPRO_RS11630 PF04963 Sigma-54 factor, core binding domain CYPRO_RS11630 PF00309 Sigma-54 factor, Activator interacting domain (AID) CYPRO_RS11640 PF01037 Lrp/AsnC ligand binding domain CYPRO_RS11645 PF00293 NUDIX domain CYPRO_RS11650 PF07298 NnrU protein CYPRO_RS11665 PF01725 Ham1 family CYPRO_RS11700 PF00977 Histidine biosynthesis protein CYPRO_RS11705 PF00117 Glutamine amidotransferase class-I CYPRO_RS11710 PF08645 Polynucleotide kinase 3 phosphatase CYPRO_RS11710 PF00475 Imidazoleglycerol-phosphate dehydratase CYPRO_RS11715 PF00155 Aminotransferase class I and II CYPRO_RS11720 PF00815 Histidinol dehydrogenase CYPRO_RS11725 PF01634 ATP phosphoribosyltransferase CYPRO_RS11725 PF08029 HisG, C-terminal domain CYPRO_RS11730 PF00679 Elongation factor G C-terminus CYPRO_RS11730 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS11730 PF03144 Elongation factor Tu domain 2 CYPRO_RS11730 PF06421 GTP-binding protein LepA C-terminus CYPRO_RS11740 PF10502 Signal peptidase, peptidase S26 CYPRO_RS11750 PF00128 Alpha amylase, catalytic domain CYPRO_RS11755 PF00155 Aminotransferase class I and II CYPRO_RS11760 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYPRO_RS11760 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYPRO_RS11765 PF00072 Response regulator receiver domain CYPRO_RS11765 PF00158 Sigma-54 interaction domain CYPRO_RS11765 PF02954 Bacterial regulatory protein, Fis family CYPRO_RS11770 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CYPRO_RS11775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYPRO_RS11775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYPRO_RS11785 PF09115 DNA polymerase III, delta subunit, C terminal CYPRO_RS11790 PF01678 Diaminopimelate epimerase CYPRO_RS11800 PF02780 Transketolase, C-terminal domain CYPRO_RS11800 PF02779 Transketolase, pyrimidine binding domain CYPRO_RS11810 PF00155 Aminotransferase class I and II CYPRO_RS11815 PF00534 Glycosyl transferases group 1 CYPRO_RS11815 PF13439 Glycosyltransferase Family 4 CYPRO_RS11825 PF01370 NAD dependent epimerase/dehydratase family CYPRO_RS11835 PF00633 Helix-hairpin-helix motif CYPRO_RS11835 PF14815 NUDIX domain CYPRO_RS11835 PF00730 HhH-GPD superfamily base excision DNA repair protein CYPRO_RS11840 PF00440 Bacterial regulatory proteins, tetR family CYPRO_RS11845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYPRO_RS11860 PF01370 NAD dependent epimerase/dehydratase family CYPRO_RS11865 PF00483 Nucleotidyl transferase CYPRO_RS11880 PF01370 NAD dependent epimerase/dehydratase family CYPRO_RS11885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYPRO_RS11885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYPRO_RS11885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYPRO_RS11920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYPRO_RS11920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYPRO_RS11925 PF00550 Phosphopantetheine attachment site CYPRO_RS11935 PF02397 Bacterial sugar transferase CYPRO_RS11975 PF00206 Lyase CYPRO_RS11975 PF10397 Adenylosuccinate lyase C-terminus CYPRO_RS12000 PF03328 HpcH/HpaI aldolase/citrate lyase family CYPRO_RS12005 PF00682 HMGL-like CYPRO_RS12005 PF07836 DmpG-like communication domain CYPRO_RS12025 PF01820 D-ala D-ala ligase N-terminus CYPRO_RS12025 PF07478 D-ala D-ala ligase C-terminus CYPRO_RS12030 PF02615 Malate/L-lactate dehydrogenase CYPRO_RS12050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYPRO_RS12060 PF13439 Glycosyltransferase Family 4 CYPRO_RS12060 PF00534 Glycosyl transferases group 1 CYPRO_RS12095 PF03328 HpcH/HpaI aldolase/citrate lyase family CYPRO_RS12100 PF00682 HMGL-like CYPRO_RS12100 PF07836 DmpG-like communication domain CYPRO_RS12110 PF00664 ABC transporter transmembrane region CYPRO_RS12110 PF00005 ABC transporter CYPRO_RS12160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CYPRO_RS12160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CYPRO_RS12160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CYPRO_RS12200 PF14667 Polysaccharide biosynthesis C-terminal domain CYPRO_RS12200 PF01943 Polysaccharide biosynthesis protein CYPRO_RS12240 PF00534 Glycosyl transferases group 1 CYPRO_RS12240 PF13439 Glycosyltransferase Family 4 CYPRO_RS12245 PF00534 Glycosyl transferases group 1 CYPRO_RS12245 PF13477 Glycosyl transferase 4-like CYPRO_RS12255 PF01370 NAD dependent epimerase/dehydratase family CYPRO_RS12255 PF00551 Formyl transferase CYPRO_RS12255 PF02911 Formyl transferase, C-terminal domain CYPRO_RS12260 PF02397 Bacterial sugar transferase CYPRO_RS12270 PF00224 Pyruvate kinase, barrel domain CYPRO_RS12270 PF02887 Pyruvate kinase, alpha/beta domain CYPRO_RS12275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYPRO_RS12275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYPRO_RS12290 PF02618 YceG-like family CYPRO_RS12295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CYPRO_RS12300 PF13614 AAA domain CYPRO_RS12310 PF00476 DNA polymerase family A CYPRO_RS12310 PF01612 3'-5' exonuclease CYPRO_RS12310 PF01367 5'-3' exonuclease, C-terminal SAM fold CYPRO_RS12310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYPRO_RS12325 PF17871 AAA lid domain CYPRO_RS12325 PF07724 AAA domain (Cdc48 subfamily) CYPRO_RS12325 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS12325 PF10431 C-terminal, D2-small domain, of ClpB protein CYPRO_RS12325 PF02861 Clp amino terminal domain, pathogenicity island component CYPRO_RS12355 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYPRO_RS12355 PF00128 Alpha amylase, catalytic domain CYPRO_RS12360 PF00356 Bacterial regulatory proteins, lacI family CYPRO_RS12390 PF00593 TonB dependent receptor CYPRO_RS12390 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS12405 PF04551 GcpE protein CYPRO_RS12410 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CYPRO_RS12410 PF01694 Rhomboid family CYPRO_RS12420 PF01593 Flavin containing amine oxidoreductase CYPRO_RS12425 PF00378 Enoyl-CoA hydratase/isomerase CYPRO_RS12430 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CYPRO_RS12430 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CYPRO_RS12445 PF00009 Elongation factor Tu GTP binding domain CYPRO_RS12445 PF03764 Elongation factor G, domain IV CYPRO_RS12445 PF14492 Elongation Factor G, domain II CYPRO_RS12445 PF00679 Elongation factor G C-terminus CYPRO_RS12445 PF03144 Elongation factor Tu domain 2 CYPRO_RS12450 PF17763 Glutaminase/Asparaginase C-terminal domain CYPRO_RS12450 PF00710 Asparaginase, N-terminal CYPRO_RS12460 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CYPRO_RS12460 PF00730 HhH-GPD superfamily base excision DNA repair protein CYPRO_RS12465 PF04238 Protein of unknown function (DUF420) CYPRO_RS12470 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYPRO_RS12470 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYPRO_RS12475 PF00672 HAMP domain CYPRO_RS12475 PF00989 PAS fold CYPRO_RS12475 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS12475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS12485 PF08453 Peptidase family M9 N-terminal CYPRO_RS12485 PF01752 Collagenase CYPRO_RS12485 PF18496 Collagenase G catalytic helper subdomain CYPRO_RS12515 PF01255 Putative undecaprenyl diphosphate synthase CYPRO_RS12520 PF00885 6,7-dimethyl-8-ribityllumazine synthase CYPRO_RS12530 PF03572 Peptidase family S41 CYPRO_RS12530 PF13180 PDZ domain CYPRO_RS12535 PF05257 CHAP domain CYPRO_RS12535 PF01476 LysM domain CYPRO_RS12540 PF00795 Carbon-nitrogen hydrolase CYPRO_RS12540 PF02540 NAD synthase CYPRO_RS12555 PF00293 NUDIX domain CYPRO_RS12555 PF09297 NADH pyrophosphatase zinc ribbon domain CYPRO_RS12555 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CYPRO_RS12560 PF00117 Glutamine amidotransferase class-I CYPRO_RS12560 PF06418 CTP synthase N-terminus CYPRO_RS12575 PF00588 SpoU rRNA Methylase family CYPRO_RS12575 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYPRO_RS12580 PF00072 Response regulator receiver domain CYPRO_RS12580 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS12585 PF18698 Histidine kinase sensor domain CYPRO_RS12585 PF00989 PAS fold CYPRO_RS12585 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS12585 PF00672 HAMP domain CYPRO_RS12590 PF00005 ABC transporter CYPRO_RS12600 PF00392 Bacterial regulatory proteins, gntR family CYPRO_RS12610 PF00027 Cyclic nucleotide-binding domain CYPRO_RS12610 PF13545 Crp-like helix-turn-helix domain CYPRO_RS12615 PF01594 AI-2E family transporter CYPRO_RS12635 PF00072 Response regulator receiver domain CYPRO_RS12635 PF00211 Adenylate and Guanylate cyclase catalytic domain CYPRO_RS12640 PF12706 Beta-lactamase superfamily domain CYPRO_RS12655 PF00082 Subtilase family CYPRO_RS12665 PF00266 Aminotransferase class-V CYPRO_RS12680 PF02515 CoA-transferase family III CYPRO_RS12685 PF01177 Asp/Glu/Hydantoin racemase CYPRO_RS12690 PF01435 Peptidase family M48 CYPRO_RS12695 PF04011 LemA family CYPRO_RS12705 PF01804 Penicillin amidase CYPRO_RS12715 PF02142 MGS-like domain CYPRO_RS12730 PF03441 FAD binding domain of DNA photolyase CYPRO_RS12730 PF00875 DNA photolyase CYPRO_RS12755 PF03441 FAD binding domain of DNA photolyase CYPRO_RS12755 PF00875 DNA photolyase CYPRO_RS12765 PF02223 Thymidylate kinase CYPRO_RS12780 PF03448 MgtE intracellular N domain CYPRO_RS12780 PF01769 Divalent cation transporter CYPRO_RS12780 PF00571 CBS domain CYPRO_RS12785 PF00551 Formyl transferase CYPRO_RS12785 PF02911 Formyl transferase, C-terminal domain CYPRO_RS12790 PF01327 Polypeptide deformylase CYPRO_RS12795 PF03652 Holliday junction resolvase CYPRO_RS12805 PF04607 Region found in RelA / SpoT proteins CYPRO_RS12805 PF13291 ACT domain CYPRO_RS12805 PF02824 TGS domain CYPRO_RS12810 PF06832 Penicillin-Binding Protein C-terminus Family CYPRO_RS12810 PF00912 Transglycosylase CYPRO_RS12810 PF00905 Penicillin binding protein transpeptidase domain CYPRO_RS12820 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CYPRO_RS12820 PF07703 Alpha-2-macroglobulin bait region domain CYPRO_RS12820 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CYPRO_RS12820 PF00207 Alpha-2-macroglobulin family CYPRO_RS12820 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CYPRO_RS12820 PF07678 A-macroglobulin TED domain CYPRO_RS12820 PF17962 Bacterial macroglobulin domain 6 CYPRO_RS12820 PF01835 MG2 domain CYPRO_RS12820 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CYPRO_RS12850 PF03301 Tryptophan 2,3-dioxygenase CYPRO_RS12855 PF00154 recA bacterial DNA recombination protein CYPRO_RS12860 PF02631 RecX family CYPRO_RS12865 PF01594 AI-2E family transporter CYPRO_RS12870 PF02016 LD-carboxypeptidase N-terminal domain CYPRO_RS12870 PF17676 LD-carboxypeptidase C-terminal domain CYPRO_RS12875 PF00551 Formyl transferase CYPRO_RS12880 PF02142 MGS-like domain CYPRO_RS12880 PF01808 AICARFT/IMPCHase bienzyme CYPRO_RS12900 PF00905 Penicillin binding protein transpeptidase domain CYPRO_RS12905 PF01098 Cell cycle protein CYPRO_RS12910 PF01351 Ribonuclease HII CYPRO_RS12940 PF01012 Electron transfer flavoprotein domain CYPRO_RS12945 PF00766 Electron transfer flavoprotein FAD-binding domain CYPRO_RS12945 PF01012 Electron transfer flavoprotein domain CYPRO_RS12950 PF01494 FAD binding domain CYPRO_RS12965 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CYPRO_RS12975 PF13476 AAA domain CYPRO_RS12980 PF12320 Type 5 capsule protein repressor C-terminal domain CYPRO_RS12980 PF00149 Calcineurin-like phosphoesterase CYPRO_RS13000 PF00593 TonB dependent receptor CYPRO_RS13000 PF07715 TonB-dependent Receptor Plug Domain CYPRO_RS13020 PF16870 2-oxoglutarate dehydrogenase C-terminal CYPRO_RS13020 PF02779 Transketolase, pyrimidine binding domain CYPRO_RS13020 PF00676 Dehydrogenase E1 component CYPRO_RS13020 PF16078 2-oxoglutarate dehydrogenase N-terminus CYPRO_RS13020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYPRO_RS13035 PF01676 Metalloenzyme superfamily CYPRO_RS13040 PF04545 Sigma-70, region 4 CYPRO_RS13040 PF03979 Sigma-70 factor, region 1.1 CYPRO_RS13040 PF04539 Sigma-70 region 3 CYPRO_RS13040 PF04542 Sigma-70 region 2 CYPRO_RS13040 PF00140 Sigma-70 factor, region 1.2 CYPRO_RS13055 PF00582 Universal stress protein family CYPRO_RS13060 PF00474 Sodium:solute symporter family CYPRO_RS13070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYPRO_RS13075 PF03636 Glycosyl hydrolase family 65, N-terminal domain CYPRO_RS13075 PF03632 Glycosyl hydrolase family 65 central catalytic domain CYPRO_RS13075 PF03633 Glycosyl hydrolase family 65, C-terminal domain CYPRO_RS13085 PF01425 Amidase CYPRO_RS13090 PF02416 mttA/Hcf106 family CYPRO_RS13110 PF01938 TRAM domain CYPRO_RS13110 PF05958 tRNA (Uracil-5-)-methyltransferase CYPRO_RS13115 PF01593 Flavin containing amine oxidoreductase CYPRO_RS13120 PF00924 Mechanosensitive ion channel CYPRO_RS13125 PF00534 Glycosyl transferases group 1 CYPRO_RS13125 PF13439 Glycosyltransferase Family 4 CYPRO_RS13135 PF00202 Aminotransferase class-III CYPRO_RS13140 PF00106 short chain dehydrogenase CYPRO_RS13155 PF06480 FtsH Extracellular CYPRO_RS13155 PF17862 AAA+ lid domain CYPRO_RS13155 PF01434 Peptidase family M41 CYPRO_RS13155 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS13160 PF02769 AIR synthase related protein, C-terminal domain CYPRO_RS13160 PF00586 AIR synthase related protein, N-terminal domain CYPRO_RS13180 PF01618 MotA/TolQ/ExbB proton channel family CYPRO_RS13190 PF03948 Ribosomal protein L9, C-terminal domain CYPRO_RS13190 PF01281 Ribosomal protein L9, N-terminal domain CYPRO_RS13195 PF01084 Ribosomal protein S18 CYPRO_RS13200 PF01250 Ribosomal protein S6 CYPRO_RS13205 PF00361 Proton-conducting membrane transporter CYPRO_RS13210 PF01329 Pterin 4 alpha carbinolamine dehydratase CYPRO_RS13215 PF00361 Proton-conducting membrane transporter CYPRO_RS13220 PF00361 Proton-conducting membrane transporter CYPRO_RS13220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CYPRO_RS13220 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CYPRO_RS13225 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CYPRO_RS13230 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CYPRO_RS13235 PF07726 ATPase family associated with various cellular activities (AAA) CYPRO_RS13235 PF17863 AAA lid domain CYPRO_RS13245 PF02445 Quinolinate synthetase A protein CYPRO_RS13250 PF00575 S1 RNA binding domain CYPRO_RS13255 PF02224 Cytidylate kinase CYPRO_RS13260 PF01649 Ribosomal protein S20 CYPRO_RS13265 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CYPRO_RS13265 PF01676 Metalloenzyme superfamily CYPRO_RS13275 PF17871 AAA lid domain CYPRO_RS13275 PF10431 C-terminal, D2-small domain, of ClpB protein CYPRO_RS13275 PF02861 Clp amino terminal domain, pathogenicity island component CYPRO_RS13275 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS13275 PF07724 AAA domain (Cdc48 subfamily) CYPRO_RS13285 PF00873 AcrB/AcrD/AcrF family CYPRO_RS13290 PF13533 Biotin-lipoyl like CYPRO_RS13295 PF00005 ABC transporter CYPRO_RS13305 PF01039 Carboxyl transferase domain CYPRO_RS13320 PF00224 Pyruvate kinase, barrel domain CYPRO_RS13320 PF02887 Pyruvate kinase, alpha/beta domain CYPRO_RS13330 PF02308 MgtC family CYPRO_RS13355 PF00156 Phosphoribosyl transferase domain CYPRO_RS13360 PF01171 PP-loop family CYPRO_RS13365 PF03099 Biotin/lipoate A/B protein ligase family CYPRO_RS13365 PF02237 Biotin protein ligase C terminal domain CYPRO_RS13365 PF08279 HTH domain CYPRO_RS13375 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain CYPRO_RS13375 PF01380 SIS domain CYPRO_RS13380 PF05524 PEP-utilising enzyme, N-terminal CYPRO_RS13380 PF00391 PEP-utilising enzyme, mobile domain CYPRO_RS13380 PF02896 PEP-utilising enzyme, TIM barrel domain CYPRO_RS13385 PF00381 PTS HPr component phosphorylation site CYPRO_RS13390 PF02686 Glu-tRNAGln amidotransferase C subunit CYPRO_RS13400 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS13400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CYPRO_RS13400 PF00072 Response regulator receiver domain CYPRO_RS13400 PF01627 Hpt domain CYPRO_RS13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS13400 PF00672 HAMP domain CYPRO_RS13405 PF02350 UDP-N-acetylglucosamine 2-epimerase CYPRO_RS13425 PF01436 NHL repeat CYPRO_RS13425 PF00934 PE family CYPRO_RS13440 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS13440 PF12002 MgsA AAA+ ATPase C terminal CYPRO_RS13440 PF16193 AAA C-terminal domain CYPRO_RS13445 PF02887 Pyruvate kinase, alpha/beta domain CYPRO_RS13445 PF00224 Pyruvate kinase, barrel domain CYPRO_RS13450 PF00224 Pyruvate kinase, barrel domain CYPRO_RS13450 PF00391 PEP-utilising enzyme, mobile domain CYPRO_RS13450 PF02887 Pyruvate kinase, alpha/beta domain CYPRO_RS13455 PF00082 Subtilase family CYPRO_RS13455 PF05922 Peptidase inhibitor I9 CYPRO_RS13460 PF03009 Glycerophosphoryl diester phosphodiesterase family CYPRO_RS13480 PF00005 ABC transporter CYPRO_RS13485 PF13472 GDSL-like Lipase/Acylhydrolase family CYPRO_RS13490 PF13393 Histidyl-tRNA synthetase CYPRO_RS13490 PF03129 Anticodon binding domain CYPRO_RS13505 PF02617 ATP-dependent Clp protease adaptor protein ClpS CYPRO_RS13510 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS13510 PF10431 C-terminal, D2-small domain, of ClpB protein CYPRO_RS13510 PF07724 AAA domain (Cdc48 subfamily) CYPRO_RS13510 PF02861 Clp amino terminal domain, pathogenicity island component CYPRO_RS13510 PF17871 AAA lid domain CYPRO_RS13520 PF04052 TolB amino-terminal domain CYPRO_RS13525 PF12627 Probable RNA and SrmB- binding site of polymerase A CYPRO_RS13525 PF01743 Poly A polymerase head domain CYPRO_RS13525 PF13735 tRNA nucleotidyltransferase domain 2 putative CYPRO_RS13530 PF00288 GHMP kinases N terminal domain CYPRO_RS13530 PF08544 GHMP kinases C terminal CYPRO_RS13535 PF00343 Carbohydrate phosphorylase CYPRO_RS13545 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYPRO_RS13580 PF01979 Amidohydrolase family CYPRO_RS13580 PF01979 Amidohydrolase family CYPRO_RS13585 PF03423 Carbohydrate binding domain (family 25) CYPRO_RS13585 PF00041 Fibronectin type III domain CYPRO_RS13585 PF03065 Glycosyl hydrolase family 57 CYPRO_RS13595 PF01066 CDP-alcohol phosphatidyltransferase CYPRO_RS13625 PF06969 HemN C-terminal domain CYPRO_RS13625 PF04055 Radical SAM superfamily CYPRO_RS13630 PF00933 Glycosyl hydrolase family 3 N terminal domain CYPRO_RS13630 PF01915 Glycosyl hydrolase family 3 C-terminal domain CYPRO_RS13635 PF13476 AAA domain CYPRO_RS13640 PF00004 ATPase family associated with various cellular activities (AAA) CYPRO_RS13640 PF02190 ATP-dependent protease La (LON) substrate-binding domain CYPRO_RS13640 PF05362 Lon protease (S16) C-terminal proteolytic domain CYPRO_RS13645 PF01479 S4 domain CYPRO_RS13645 PF00849 RNA pseudouridylate synthase CYPRO_RS13660 PF01925 Sulfite exporter TauE/SafE CYPRO_RS13665 PF02690 Na+/Pi-cotransporter CYPRO_RS13675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYPRO_RS13675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYPRO_RS13675 PF02770 Acyl-CoA dehydrogenase, middle domain CYPRO_RS13680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CYPRO_RS13680 PF02770 Acyl-CoA dehydrogenase, middle domain CYPRO_RS13680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CYPRO_RS13695 PF01894 Uncharacterised protein family UPF0047 CYPRO_RS13705 PF01547 Bacterial extracellular solute-binding protein CYPRO_RS13710 PF00528 Binding-protein-dependent transport system inner membrane component CYPRO_RS13715 PF08402 TOBE domain CYPRO_RS13715 PF00005 ABC transporter CYPRO_RS13725 PF04379 ApaG domain CYPRO_RS13760 PF00255 Glutathione peroxidase CYPRO_RS13775 PF12706 Beta-lactamase superfamily domain CYPRO_RS13775 PF03099 Biotin/lipoate A/B protein ligase family CYPRO_RS13785 PF01195 Peptidyl-tRNA hydrolase CYPRO_RS13790 PF01386 Ribosomal L25p family CYPRO_RS13790 PF14693 Ribosomal protein TL5, C-terminal domain CYPRO_RS13795 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYPRO_RS13795 PF14572 Phosphoribosyl synthetase-associated domain CYPRO_RS13815 PF00483 Nucleotidyl transferase CYPRO_RS13815 PF01050 Mannose-6-phosphate isomerase CYPRO_RS13820 PF00989 PAS fold CYPRO_RS13820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS13820 PF16736 Single Cache-like CYPRO_RS13820 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS13825 PF00072 Response regulator receiver domain CYPRO_RS13825 PF00486 Transcriptional regulatory protein, C terminal CYPRO_RS13830 PF01330 RuvA N terminal domain CYPRO_RS13830 PF07499 RuvA, C-terminal domain CYPRO_RS13835 PF02075 Crossover junction endodeoxyribonuclease RuvC CYPRO_RS13845 PF01464 Transglycosylase SLT domain CYPRO_RS13845 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CYPRO_RS13850 PF02978 Signal peptide binding domain CYPRO_RS13850 PF02881 SRP54-type protein, helical bundle domain CYPRO_RS13850 PF00448 SRP54-type protein, GTPase domain CYPRO_RS13855 PF00886 Ribosomal protein S16 CYPRO_RS13860 PF05239 PRC-barrel domain CYPRO_RS13860 PF01782 RimM N-terminal domain CYPRO_RS13865 PF01746 tRNA (Guanine-1)-methyltransferase CYPRO_RS13870 PF01245 Ribosomal protein L19 CYPRO_RS13880 PF10609 NUBPL iron-transfer P-loop NTPase CYPRO_RS13880 PF01883 Iron-sulfur cluster assembly protein CYPRO_RS13895 PF07690 Major Facilitator Superfamily CYPRO_RS13900 PF00202 Aminotransferase class-III CYPRO_RS13905 PF13581 Histidine kinase-like ATPase domain CYPRO_RS13910 PF00490 Delta-aminolevulinic acid dehydratase CYPRO_RS13915 PF01218 Coproporphyrinogen III oxidase CYPRO_RS13920 PF01208 Uroporphyrinogen decarboxylase (URO-D) CYPRO_RS13930 PF03900 Porphobilinogen deaminase, C-terminal domain CYPRO_RS13930 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CYPRO_RS13935 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CYPRO_RS13935 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CYPRO_RS13935 PF01488 Shikimate / quinate 5-dehydrogenase CYPRO_RS13940 PF00762 Ferrochelatase CYPRO_RS13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS13945 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS13945 PF00989 PAS fold CYPRO_RS13950 PF00072 Response regulator receiver domain CYPRO_RS13950 PF01966 HD domain CYPRO_RS13955 PF00672 HAMP domain CYPRO_RS13955 PF07228 Stage II sporulation protein E (SpoIIE) CYPRO_RS13980 PF11412 Disulphide bond corrector protein DsbC CYPRO_RS13980 PF02683 Cytochrome C biogenesis protein transmembrane region CYPRO_RS13980 PF13098 Thioredoxin-like domain CYPRO_RS13985 PF11412 Disulphide bond corrector protein DsbC CYPRO_RS13985 PF02683 Cytochrome C biogenesis protein transmembrane region CYPRO_RS13995 PF13173 AAA domain CYPRO_RS13995 PF13635 Domain of unknown function (DUF4143) CYPRO_RS14010 PF04170 NlpE N-terminal domain CYPRO_RS14010 PF17185 NlpE C-terminal OB domain CYPRO_RS14015 PF01053 Cys/Met metabolism PLP-dependent enzyme CYPRO_RS14020 PF02469 Fasciclin domain CYPRO_RS14025 PF03315 Serine dehydratase beta chain CYPRO_RS14025 PF03313 Serine dehydratase alpha chain CYPRO_RS14030 PF17149 Periplasmic sensor domain found in signal transduction proteins CYPRO_RS14030 PF00072 Response regulator receiver domain CYPRO_RS14030 PF01627 Hpt domain CYPRO_RS14030 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS14030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS14030 PF00672 HAMP domain CYPRO_RS14055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYPRO_RS14055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYPRO_RS14060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYPRO_RS14060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYPRO_RS14075 PF13173 AAA domain CYPRO_RS14075 PF13635 Domain of unknown function (DUF4143) CYPRO_RS14080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYPRO_RS14080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYPRO_RS14080 PF00403 Heavy-metal-associated domain CYPRO_RS14105 PF01758 Sodium Bile acid symporter family CYPRO_RS14120 PF13426 PAS domain CYPRO_RS14120 PF13188 PAS domain CYPRO_RS14120 PF00989 PAS fold CYPRO_RS14120 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS14125 PF09382 RQC domain CYPRO_RS14125 PF00271 Helicase conserved C-terminal domain CYPRO_RS14125 PF00270 DEAD/DEAH box helicase CYPRO_RS14125 PF00570 HRDC domain CYPRO_RS14125 PF16124 RecQ zinc-binding CYPRO_RS14130 PF07995 Glucose / Sorbosone dehydrogenase CYPRO_RS14150 PF00875 DNA photolyase CYPRO_RS14150 PF03441 FAD binding domain of DNA photolyase CYPRO_RS14155 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CYPRO_RS14190 PF00691 OmpA family CYPRO_RS14190 PF05736 OprF membrane domain CYPRO_RS14220 PF00593 TonB dependent receptor CYPRO_RS14245 PF01940 Integral membrane protein DUF92 CYPRO_RS14250 PF00375 Sodium:dicarboxylate symporter family CYPRO_RS14265 PF02545 Maf-like protein CYPRO_RS14280 PF03819 MazG nucleotide pyrophosphohydrolase domain CYPRO_RS14285 PF00285 Citrate synthase, C-terminal domain CYPRO_RS14295 PF00311 Phosphoenolpyruvate carboxylase CYPRO_RS14320 PF00082 Subtilase family CYPRO_RS14340 PF00082 Subtilase family CYPRO_RS14355 PF03442 Carbohydrate binding domain X2 CYPRO_RS14355 PF00942 Cellulose binding domain CYPRO_RS14370 PF04052 TolB amino-terminal domain CYPRO_RS14370 PF07676 WD40-like Beta Propeller Repeat CYPRO_RS14380 PF00082 Subtilase family CYPRO_RS14405 PF00578 AhpC/TSA family CYPRO_RS14420 PF00355 Rieske [2Fe-2S] domain CYPRO_RS14440 PF04389 Peptidase family M28 CYPRO_RS14485 PF02082 Transcriptional regulator CYPRO_RS14490 PF00403 Heavy-metal-associated domain CYPRO_RS14500 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYPRO_RS14510 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CYPRO_RS14510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CYPRO_RS14515 PF13746 4Fe-4S dicluster domain CYPRO_RS14515 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CYPRO_RS14515 PF12801 4Fe-4S binding domain CYPRO_RS14525 PF08340 Domain of unknown function (DUF1732) CYPRO_RS14525 PF03755 YicC-like family, N-terminal region CYPRO_RS14530 PF00625 Guanylate kinase CYPRO_RS14540 PF02441 Flavoprotein CYPRO_RS14540 PF04127 DNA / pantothenate metabolism flavoprotein CYPRO_RS14555 PF01975 Survival protein SurE CYPRO_RS14560 PF02548 Ketopantoate hydroxymethyltransferase CYPRO_RS14565 PF07977 FabA-like domain CYPRO_RS14570 PF01209 ubiE/COQ5 methyltransferase family CYPRO_RS14585 PF00156 Phosphoribosyl transferase domain CYPRO_RS14600 PF00533 BRCA1 C Terminus (BRCT) domain CYPRO_RS14600 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CYPRO_RS14600 PF12826 Helix-hairpin-helix motif CYPRO_RS14600 PF01653 NAD-dependent DNA ligase adenylation domain CYPRO_RS14600 PF03120 NAD-dependent DNA ligase OB-fold domain CYPRO_RS14605 PF01740 STAS domain CYPRO_RS14610 PF00474 Sodium:solute symporter family CYPRO_RS14615 PF01966 HD domain CYPRO_RS14615 PF07697 7TM-HD extracellular CYPRO_RS14615 PF07698 7TM receptor with intracellular HD hydrolase CYPRO_RS14620 PF02899 Phage integrase, N-terminal SAM-like domain CYPRO_RS14620 PF00589 Phage integrase family CYPRO_RS14625 PF01008 Initiation factor 2 subunit family CYPRO_RS14630 PF01966 HD domain CYPRO_RS14635 PF01300 Telomere recombination CYPRO_RS14640 PF12706 Beta-lactamase superfamily domain CYPRO_RS14645 PF01040 UbiA prenyltransferase family CYPRO_RS14665 PF00510 Cytochrome c oxidase subunit III CYPRO_RS14670 PF00115 Cytochrome C and Quinol oxidase polypeptide I CYPRO_RS14675 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CYPRO_RS14675 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CYPRO_RS14710 PF13247 4Fe-4S dicluster domain CYPRO_RS14710 PF00037 4Fe-4S binding domain CYPRO_RS14720 PF00873 AcrB/AcrD/AcrF family CYPRO_RS14725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CYPRO_RS14765 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS14765 PF00989 PAS fold CYPRO_RS14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS14775 PF00939 Sodium:sulfate symporter transmembrane region CYPRO_RS14780 PF00089 Trypsin CYPRO_RS14785 PF02898 Nitric oxide synthase, oxygenase domain CYPRO_RS14790 PF01145 SPFH domain / Band 7 family CYPRO_RS14795 PF01145 SPFH domain / Band 7 family CYPRO_RS14805 PF01842 ACT domain CYPRO_RS14805 PF00551 Formyl transferase CYPRO_RS14810 PF01139 tRNA-splicing ligase RtcB CYPRO_RS14820 PF01226 Formate/nitrite transporter CYPRO_RS14830 PF00909 Ammonium Transporter Family CYPRO_RS14840 PF04193 PQ loop repeat CYPRO_RS14860 PF00268 Ribonucleotide reductase, small chain CYPRO_RS14870 PF03781 Sulfatase-modifying factor enzyme 1 CYPRO_RS14890 PF00075 RNase H CYPRO_RS14895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYPRO_RS14900 PF10566 Glycoside hydrolase 97 CYPRO_RS14900 PF14508 Glycosyl-hydrolase 97 N-terminal CYPRO_RS14900 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CYPRO_RS14930 PF02903 Alpha amylase, N-terminal ig-like domain CYPRO_RS14930 PF00128 Alpha amylase, catalytic domain CYPRO_RS14930 PF16657 Maltogenic Amylase, C-terminal domain CYPRO_RS14945 PF02896 PEP-utilising enzyme, TIM barrel domain CYPRO_RS14945 PF00391 PEP-utilising enzyme, mobile domain CYPRO_RS14945 PF05524 PEP-utilising enzyme, N-terminal CYPRO_RS14950 PF02734 DAK2 domain CYPRO_RS14955 PF02733 Dak1 domain CYPRO_RS14965 PF00230 Major intrinsic protein CYPRO_RS14970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CYPRO_RS14970 PF01266 FAD dependent oxidoreductase CYPRO_RS14975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYPRO_RS14975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYPRO_RS15000 PF00488 MutS domain V CYPRO_RS15000 PF01713 Smr domain CYPRO_RS15010 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS15010 PF00989 PAS fold CYPRO_RS15010 PF18698 Histidine kinase sensor domain CYPRO_RS15010 PF00672 HAMP domain CYPRO_RS15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS15025 PF00282 Pyridoxal-dependent decarboxylase conserved domain CYPRO_RS15040 PF01389 OmpA-like transmembrane domain CYPRO_RS15040 PF00691 OmpA family CYPRO_RS15045 PF07694 5TMR of 5TMR-LYT CYPRO_RS15045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS15045 PF06580 Histidine kinase CYPRO_RS15050 PF04397 LytTr DNA-binding domain CYPRO_RS15050 PF00072 Response regulator receiver domain CYPRO_RS15065 PF00144 Beta-lactamase CYPRO_RS15075 PF13180 PDZ domain CYPRO_RS15075 PF17820 PDZ domain CYPRO_RS15090 PF01136 Peptidase family U32 CYPRO_RS15100 PF09334 tRNA synthetases class I (M) CYPRO_RS15100 PF13603 Leucyl-tRNA synthetase, Domain 2 CYPRO_RS15100 PF00133 tRNA synthetases class I (I, L, M and V) CYPRO_RS15100 PF08264 Anticodon-binding domain of tRNA CYPRO_RS15105 PF01546 Peptidase family M20/M25/M40 CYPRO_RS15105 PF07687 Peptidase dimerisation domain CYPRO_RS15130 PF00750 tRNA synthetases class I (R) CYPRO_RS15130 PF05746 DALR anticodon binding domain CYPRO_RS15130 PF03485 Arginyl tRNA synthetase N terminal domain CYPRO_RS15135 PF12826 Helix-hairpin-helix motif CYPRO_RS15135 PF04002 RadC-like JAB domain CYPRO_RS15140 PF01592 NifU-like N terminal domain CYPRO_RS15145 PF01252 Signal peptidase (SPase) II CYPRO_RS15155 PF00133 tRNA synthetases class I (I, L, M and V) CYPRO_RS15155 PF08264 Anticodon-binding domain of tRNA CYPRO_RS15165 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYPRO_RS15170 PF03881 Fructosamine kinase CYPRO_RS15175 PF01497 Periplasmic binding protein CYPRO_RS15225 PF01048 Phosphorylase superfamily CYPRO_RS15225 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CYPRO_RS15230 PF02541 Ppx/GppA phosphatase family CYPRO_RS15235 PF00583 Acetyltransferase (GNAT) family CYPRO_RS15235 PF00795 Carbon-nitrogen hydrolase CYPRO_RS15245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYPRO_RS15245 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYPRO_RS15245 PF02142 MGS-like domain CYPRO_RS15250 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CYPRO_RS15250 PF00117 Glutamine amidotransferase class-I CYPRO_RS15260 PF03050 Transposase IS66 family CYPRO_RS15260 PF13005 zinc-finger binding domain of transposase IS66 CYPRO_RS15260 PF13817 IS66 C-terminal element CYPRO_RS15260 PF13007 Transposase C of IS166 homeodomain CYPRO_RS15275 PF01230 HIT domain CYPRO_RS15305 PF01850 PIN domain CYPRO_RS15330 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYPRO_RS15340 PF00939 Sodium:sulfate symporter transmembrane region CYPRO_RS15355 PF02652 L-lactate permease CYPRO_RS15370 PF00171 Aldehyde dehydrogenase family CYPRO_RS15410 PF01464 Transglycosylase SLT domain CYPRO_RS15410 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYPRO_RS15420 PF00814 Glycoprotease family CYPRO_RS15465 PF00005 ABC transporter CYPRO_RS15470 PF02586 SOS response associated peptidase (SRAP) CYPRO_RS15475 PF02457 DisA bacterial checkpoint controller nucleotide-binding CYPRO_RS15480 PF00809 Pterin binding enzyme CYPRO_RS15485 PF11953 Domain of unknown function (DUF3470) CYPRO_RS15485 PF00037 4Fe-4S binding domain CYPRO_RS15495 PF00593 TonB dependent receptor CYPRO_RS15515 PF02627 Carboxymuconolactone decarboxylase family CYPRO_RS15525 PF05552 Conserved TM helix CYPRO_RS15525 PF00924 Mechanosensitive ion channel CYPRO_RS15530 PF00106 short chain dehydrogenase CYPRO_RS15560 PF07683 Cobalamin synthesis protein cobW C-terminal domain CYPRO_RS15560 PF02492 CobW/HypB/UreG, nucleotide-binding domain CYPRO_RS15565 PF17773 UPF0176 acylphosphatase like domain CYPRO_RS15565 PF00581 Rhodanese-like domain CYPRO_RS15565 PF12368 Rhodanase C-terminal CYPRO_RS15570 PF00849 RNA pseudouridylate synthase CYPRO_RS15580 PF02469 Fasciclin domain CYPRO_RS15585 PF02469 Fasciclin domain CYPRO_RS15590 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CYPRO_RS15590 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CYPRO_RS15610 PF00270 DEAD/DEAH box helicase CYPRO_RS15610 PF00271 Helicase conserved C-terminal domain CYPRO_RS15625 PF00535 Glycosyl transferase family 2 CYPRO_RS15645 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CYPRO_RS15645 PF00326 Prolyl oligopeptidase family CYPRO_RS15645 PF07676 WD40-like Beta Propeller Repeat CYPRO_RS15665 PF01979 Amidohydrolase family CYPRO_RS15670 PF01979 Amidohydrolase family CYPRO_RS15690 PF03150 Di-haem cytochrome c peroxidase CYPRO_RS15690 PF00034 Cytochrome c CYPRO_RS15740 PF01867 CRISPR associated protein Cas1 CYPRO_RS15745 PF09827 CRISPR associated protein Cas2 CYPRO_RS15765 PF01966 HD domain CYPRO_RS15765 PF18211 Csm1 subunit domain B CYPRO_RS15775 PF03787 RAMP superfamily CYPRO_RS15790 PF00962 Adenosine/AMP deaminase CYPRO_RS15800 PF01850 PIN domain CYPRO_RS15850 PF03965 Penicillinase repressor CYPRO_RS15865 PF13173 AAA domain CYPRO_RS15865 PF13635 Domain of unknown function (DUF4143) CYPRO_RS15880 PF04107 Glutamate-cysteine ligase family 2(GCS2) CYPRO_RS15885 PF00534 Glycosyl transferases group 1 CYPRO_RS15885 PF13439 Glycosyltransferase Family 4 CYPRO_RS15890 PF01709 Transcriptional regulator CYPRO_RS15910 PF01546 Peptidase family M20/M25/M40 CYPRO_RS15910 PF07687 Peptidase dimerisation domain CYPRO_RS15930 PF10688 Bacterial inner membrane protein CYPRO_RS15955 PF00474 Sodium:solute symporter family CYPRO_RS15965 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ CYPRO_RS15975 PF02603 HPr Serine kinase N terminus CYPRO_RS15975 PF07475 HPr Serine kinase C-terminal domain CYPRO_RS16020 PF07669 Eco57I restriction-modification methylase CYPRO_RS16050 PF17841 BID domain of Bartonella effector protein (Bep) CYPRO_RS16050 PF02661 Fic/DOC family CYPRO_RS16095 PF02153 Prephenate dehydrogenase CYPRO_RS16095 PF01817 Chorismate mutase type II CYPRO_RS16105 PF07670 Nucleoside recognition CYPRO_RS16110 PF07670 Nucleoside recognition CYPRO_RS16125 PF00141 Peroxidase CYPRO_RS16130 PF04357 TamB, inner membrane protein subunit of TAM complex CYPRO_RS16135 PF01103 Surface antigen CYPRO_RS16135 PF07244 Surface antigen variable number repeat CYPRO_RS16135 PF17243 POTRA domain TamA domain 1 CYPRO_RS16140 PF01968 Hydantoinase/oxoprolinase CYPRO_RS16140 PF05378 Hydantoinase/oxoprolinase N-terminal region CYPRO_RS16145 PF00989 PAS fold CYPRO_RS16145 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS16145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS16145 PF11808 Phosphate regulon sensor protein PhoR CYPRO_RS16160 PF05973 Phage derived protein Gp49-like (DUF891) CYPRO_RS16185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYPRO_RS16190 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CYPRO_RS16190 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CYPRO_RS16190 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CYPRO_RS16195 PF03807 NADP oxidoreductase coenzyme F420-dependent CYPRO_RS16195 PF14748 Pyrroline-5-carboxylate reductase dimerisation CYPRO_RS16210 PF06491 Disulphide isomerase CYPRO_RS16220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CYPRO_RS16220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CYPRO_RS16225 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYPRO_RS16225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYPRO_RS16235 PF01336 OB-fold nucleic acid binding domain CYPRO_RS16235 PF00152 tRNA synthetases class II (D, K and N) CYPRO_RS16235 PF02938 GAD domain CYPRO_RS16245 PF00072 Response regulator receiver domain CYPRO_RS16245 PF00196 Bacterial regulatory proteins, luxR family CYPRO_RS16250 PF02867 Ribonucleotide reductase, barrel domain CYPRO_RS16250 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CYPRO_RS16265 PF00849 RNA pseudouridylate synthase CYPRO_RS16275 PF13086 AAA domain CYPRO_RS16275 PF13195 Protein of unknown function (DUF4011) CYPRO_RS16275 PF13195 Protein of unknown function (DUF4011) CYPRO_RS16275 PF13086 AAA domain CYPRO_RS16275 PF13087 AAA domain CYPRO_RS16275 PF13087 AAA domain CYPRO_RS16280 PF07728 AAA domain (dynein-related subfamily) CYPRO_RS16280 PF12102 Domain of unknown function (DUF3578) CYPRO_RS16315 PF13439 Glycosyltransferase Family 4 CYPRO_RS16315 PF00534 Glycosyl transferases group 1 CYPRO_RS16325 PF00132 Bacterial transferase hexapeptide (six repeats) CYPRO_RS16330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYPRO_RS16330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYPRO_RS16335 PF00149 Calcineurin-like phosphoesterase CYPRO_RS16345 PF08281 Sigma-70, region 4 CYPRO_RS16345 PF04542 Sigma-70 region 2 CYPRO_RS16350 PF00512 His Kinase A (phospho-acceptor) domain CYPRO_RS16350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYPRO_RS16355 PF02463 RecF/RecN/SMC N terminal domain CYPRO_RS16360 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CYPRO_RS16365 PF03952 Enolase, N-terminal domain CYPRO_RS16365 PF00113 Enolase, C-terminal TIM barrel domain CYPRO_RS16370 PF13419 Haloacid dehalogenase-like hydrolase CYPRO_RS16385 PF05175 Methyltransferase small domain CYPRO_RS16385 PF17827 PrmC N-terminal domain