locus-tag class description MF1_RS00005 PF03618 Kinase/pyrophosphorylase MF1_RS00010 PF02545 Maf-like protein MF1_RS00015 PF01488 Shikimate / quinate 5-dehydrogenase MF1_RS00015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MF1_RS00015 PF08501 Shikimate dehydrogenase substrate binding domain MF1_RS00020 PF01121 Dephospho-CoA kinase MF1_RS00025 PF00929 Exonuclease MF1_RS00030 PF01367 5'-3' exonuclease, C-terminal SAM fold MF1_RS00030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MF1_RS00030 PF00476 DNA polymerase family A MF1_RS00030 PF01612 3'-5' exonuclease MF1_RS00040 PF01027 Inhibitor of apoptosis-promoting Bax1 MF1_RS00045 PF01252 Signal peptidase (SPase) II MF1_RS00050 PF00588 SpoU rRNA Methylase family MF1_RS00065 PF00216 Bacterial DNA-binding protein MF1_RS00080 PF00005 ABC transporter MF1_RS00085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MF1_RS00095 PF04055 Radical SAM superfamily MF1_RS00110 PF01921 tRNA synthetases class I (K) MF1_RS00115 PF16658 Class II release factor RF3, C-terminal domain MF1_RS00115 PF03144 Elongation factor Tu domain 2 MF1_RS00115 PF00009 Elongation factor Tu GTP binding domain MF1_RS00120 PF00085 Thioredoxin MF1_RS00125 PF12705 PD-(D/E)XK nuclease superfamily MF1_RS00125 PF00580 UvrD/REP helicase N-terminal domain MF1_RS00125 PF13361 UvrD-like helicase C-terminal domain MF1_RS00135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MF1_RS00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS00140 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS00145 PF05221 S-adenosyl-L-homocysteine hydrolase MF1_RS00145 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MF1_RS00150 PF13460 NAD(P)H-binding MF1_RS00150 PF11066 Protein of unknown function (DUF2867) MF1_RS00155 PF08245 Mur ligase middle domain MF1_RS00160 PF01039 Carboxyl transferase domain MF1_RS00165 PF04127 DNA / pantothenate metabolism flavoprotein MF1_RS00165 PF02441 Flavoprotein MF1_RS00170 PF03109 ABC1 family MF1_RS00175 PF01209 ubiE/COQ5 methyltransferase family MF1_RS00180 PF01751 Toprim domain MF1_RS00180 PF00204 DNA gyrase B MF1_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS00180 PF00986 DNA gyrase B subunit, carboxyl terminus MF1_RS00190 PF13335 Magnesium chelatase, subunit ChlI C-terminal MF1_RS00190 PF01078 Magnesium chelatase, subunit ChlI MF1_RS00195 PF17243 POTRA domain TamA domain 1 MF1_RS00195 PF07244 Surface antigen variable number repeat MF1_RS00195 PF01103 Surface antigen MF1_RS00205 PF00005 ABC transporter MF1_RS00205 PF00664 ABC transporter transmembrane region MF1_RS00210 PF00707 Translation initiation factor IF-3, C-terminal domain MF1_RS00210 PF05198 Translation initiation factor IF-3, N-terminal domain MF1_RS00225 PF07687 Peptidase dimerisation domain MF1_RS00225 PF01546 Peptidase family M20/M25/M40 MF1_RS00230 PF06969 HemN C-terminal domain MF1_RS00230 PF04055 Radical SAM superfamily MF1_RS00235 PF01725 Ham1 family MF1_RS00240 PF01628 HrcA protein C terminal domain MF1_RS00240 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding MF1_RS00245 PF01025 GrpE MF1_RS00255 PF00381 PTS HPr component phosphorylation site MF1_RS00260 PF03830 PTS system sorbose subfamily IIB component MF1_RS00260 PF03610 PTS system fructose IIA component MF1_RS00270 PF00672 HAMP domain MF1_RS00270 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS00270 PF13756 Stimulus-sensing domain MF1_RS00270 PF13755 Sensor N-terminal transmembrane domain MF1_RS00275 PF00072 Response regulator receiver domain MF1_RS00275 PF00486 Transcriptional regulatory protein, C terminal MF1_RS00280 PF04972 BON domain MF1_RS00280 PF01476 LysM domain MF1_RS00290 PF00012 Hsp70 protein MF1_RS00295 PF00226 DnaJ domain MF1_RS00295 PF00684 DnaJ central domain MF1_RS00295 PF01556 DnaJ C terminal domain MF1_RS00300 PF00696 Amino acid kinase family MF1_RS00305 PF00892 EamA-like transporter family MF1_RS00310 PF00009 Elongation factor Tu GTP binding domain MF1_RS00310 PF00679 Elongation factor G C-terminus MF1_RS00310 PF03144 Elongation factor Tu domain 2 MF1_RS00310 PF06421 GTP-binding protein LepA C-terminus MF1_RS00315 PF00132 Bacterial transferase hexapeptide (six repeats) MF1_RS00315 PF14602 Hexapeptide repeat of succinyl-transferase MF1_RS00315 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MF1_RS00325 PF01416 tRNA pseudouridine synthase MF1_RS00330 PF00551 Formyl transferase MF1_RS00330 PF02911 Formyl transferase, C-terminal domain MF1_RS00335 PF01327 Polypeptide deformylase MF1_RS00340 PF02646 RmuC family MF1_RS00355 PF00011 Hsp20/alpha crystallin family MF1_RS00360 PF00730 HhH-GPD superfamily base excision DNA repair protein MF1_RS00360 PF00633 Helix-hairpin-helix motif MF1_RS00360 PF10576 Iron-sulfur binding domain of endonuclease III MF1_RS00365 PF01632 Ribosomal protein L35 MF1_RS00370 PF00453 Ribosomal protein L20 MF1_RS00375 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MF1_RS00375 PF01409 tRNA synthetases class II core domain (F) MF1_RS00380 PF03484 tRNA synthetase B5 domain MF1_RS00380 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MF1_RS00380 PF01588 Putative tRNA binding domain MF1_RS00380 PF03483 B3/4 domain MF1_RS00380 PF03147 Ferredoxin-fold anticodon binding domain MF1_RS00385 PF01297 Zinc-uptake complex component A periplasmic MF1_RS00390 PF00005 ABC transporter MF1_RS00395 PF00950 ABC 3 transport family MF1_RS00400 PF00950 ABC 3 transport family MF1_RS00405 PF04304 Protein of unknown function (DUF454) MF1_RS00410 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MF1_RS00410 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MF1_RS00415 PF06165 Glycosyltransferase family 36 MF1_RS00415 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain MF1_RS00415 PF10091 Putative glucoamylase MF1_RS00420 PF00575 S1 RNA binding domain MF1_RS00425 PF02224 Cytidylate kinase MF1_RS00430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MF1_RS00450 PF00488 MutS domain V MF1_RS00450 PF01624 MutS domain I MF1_RS00450 PF05192 MutS domain III MF1_RS00450 PF05190 MutS family domain IV MF1_RS00450 PF05188 MutS domain II MF1_RS00455 PF01515 Phosphate acetyl/butaryl transferase MF1_RS00455 PF00390 Malic enzyme, N-terminal domain MF1_RS00455 PF03949 Malic enzyme, NAD binding domain MF1_RS00460 PF02556 Preprotein translocase subunit SecB MF1_RS00465 PF04186 FxsA cytoplasmic membrane protein MF1_RS00480 PF01430 Hsp33 protein MF1_RS00490 PF00202 Aminotransferase class-III MF1_RS00500 PF08534 Redoxin MF1_RS00510 PF01578 Cytochrome C assembly protein MF1_RS00515 PF03379 CcmB protein MF1_RS00520 PF00005 ABC transporter MF1_RS00525 PF00694 Aconitase C-terminal domain MF1_RS00525 PF00330 Aconitase family (aconitate hydratase) MF1_RS00530 PF01649 Ribosomal protein S20 MF1_RS00535 PF00308 Bacterial dnaA protein MF1_RS00535 PF08299 Bacterial dnaA protein helix-turn-helix MF1_RS00535 PF11638 DnaA N-terminal domain MF1_RS00540 PF02767 DNA polymerase III beta subunit, central domain MF1_RS00540 PF00712 DNA polymerase III beta subunit, N-terminal domain MF1_RS00540 PF02768 DNA polymerase III beta subunit, C-terminal domain MF1_RS00545 PF02463 RecF/RecN/SMC N terminal domain MF1_RS00550 PF01220 Dehydroquinase class II MF1_RS00555 PF06481 COX Aromatic Rich Motif MF1_RS00555 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MF1_RS00560 PF00115 Cytochrome C and Quinol oxidase polypeptide I MF1_RS00565 PF00510 Cytochrome c oxidase subunit III MF1_RS00570 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MF1_RS00575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MF1_RS00575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MF1_RS00585 PF00109 Beta-ketoacyl synthase, N-terminal domain MF1_RS00585 PF02801 Beta-ketoacyl synthase, C-terminal domain MF1_RS00590 PF07977 FabA-like domain MF1_RS00605 PF01165 Ribosomal protein S21 MF1_RS00625 PF00873 AcrB/AcrD/AcrF family MF1_RS00630 PF00342 Phosphoglucose isomerase MF1_RS00640 PF00829 Ribosomal prokaryotic L21 protein MF1_RS00645 PF01016 Ribosomal L27 protein MF1_RS00650 PF00381 PTS HPr component phosphorylation site MF1_RS00650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MF1_RS00650 PF02896 PEP-utilising enzyme, TIM barrel domain MF1_RS00650 PF00391 PEP-utilising enzyme, mobile domain MF1_RS00650 PF05524 PEP-utilising enzyme, N-terminal MF1_RS00670 PF05662 Coiled stalk of trimeric autotransporter adhesin MF1_RS00670 PF05658 Head domain of trimeric autotransporter adhesin MF1_RS00670 PF03895 YadA-like membrane anchor domain MF1_RS00675 PF03895 YadA-like membrane anchor domain MF1_RS00675 PF05658 Head domain of trimeric autotransporter adhesin MF1_RS00675 PF05662 Coiled stalk of trimeric autotransporter adhesin MF1_RS00680 PF05662 Coiled stalk of trimeric autotransporter adhesin MF1_RS00680 PF05658 Head domain of trimeric autotransporter adhesin MF1_RS00680 PF03895 YadA-like membrane anchor domain MF1_RS00685 PF05658 Head domain of trimeric autotransporter adhesin MF1_RS00685 PF03895 YadA-like membrane anchor domain MF1_RS00685 PF05662 Coiled stalk of trimeric autotransporter adhesin MF1_RS00710 PF01728 FtsJ-like methyltransferase MF1_RS00715 PF01926 50S ribosome-binding GTPase MF1_RS00715 PF01018 GTP1/OBG MF1_RS00720 PF01472 PUA domain MF1_RS00720 PF00696 Amino acid kinase family MF1_RS00725 PF00171 Aldehyde dehydrogenase family MF1_RS00730 PF01467 Cytidylyltransferase-like MF1_RS00750 PF03572 Peptidase family S41 MF1_RS00750 PF13180 PDZ domain MF1_RS00755 PF00293 NUDIX domain MF1_RS00760 PF06776 Invasion associated locus B (IalB) protein MF1_RS00765 PF02325 YGGT family MF1_RS00770 PF02594 Uncharacterised ACR, YggU family COG1872 MF1_RS00775 PF00719 Inorganic pyrophosphatase MF1_RS00785 PF00571 CBS domain MF1_RS00785 PF01769 Divalent cation transporter MF1_RS00785 PF03448 MgtE intracellular N domain MF1_RS00800 PF13406 Transglycosylase SLT domain MF1_RS00805 PF00483 Nucleotidyl transferase MF1_RS00810 PF01380 SIS domain MF1_RS00810 PF00571 CBS domain MF1_RS00820 PF00158 Sigma-54 interaction domain MF1_RS00820 PF00072 Response regulator receiver domain MF1_RS00820 PF02954 Bacterial regulatory protein, Fis family MF1_RS00825 PF13091 PLD-like domain MF1_RS00830 PF00571 CBS domain MF1_RS00830 PF00478 IMP dehydrogenase / GMP reductase domain MF1_RS00835 PF01189 16S rRNA methyltransferase RsmB/F MF1_RS00835 PF01029 NusB family MF1_RS00840 PF02540 NAD synthase MF1_RS00840 PF00958 GMP synthase C terminal domain MF1_RS00840 PF00117 Glutamine amidotransferase class-I MF1_RS00845 PF03009 Glycerophosphoryl diester phosphodiesterase family MF1_RS00850 PF00005 ABC transporter MF1_RS00855 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS00860 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS00865 PF13416 Bacterial extracellular solute-binding protein MF1_RS00870 PF01297 Zinc-uptake complex component A periplasmic MF1_RS00875 PF00950 ABC 3 transport family MF1_RS00880 PF00005 ABC transporter MF1_RS00890 PF07972 NrdI Flavodoxin like MF1_RS00895 PF02867 Ribonucleotide reductase, barrel domain MF1_RS00895 PF08343 Ribonucleotide reductase N-terminal MF1_RS00895 PF00317 Ribonucleotide reductase, all-alpha domain MF1_RS00900 PF00268 Ribonucleotide reductase, small chain MF1_RS00905 PF17827 PrmC N-terminal domain MF1_RS00905 PF05175 Methyltransferase small domain MF1_RS00910 PF03462 PCRF domain MF1_RS00910 PF00472 RF-1 domain MF1_RS00915 PF01475 Ferric uptake regulator family MF1_RS00920 PF01043 SecA preprotein cross-linking domain MF1_RS00920 PF07517 SecA DEAD-like domain MF1_RS00920 PF02810 SEC-C motif MF1_RS00920 PF07516 SecA Wing and Scaffold domain MF1_RS00925 PF00639 PPIC-type PPIASE domain MF1_RS00930 PF01960 ArgJ family MF1_RS00935 PF00293 NUDIX domain MF1_RS00940 PF00877 NlpC/P60 family MF1_RS00940 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain MF1_RS00945 PF02789 Cytosol aminopeptidase family, N-terminal domain MF1_RS00945 PF00883 Cytosol aminopeptidase family, catalytic domain MF1_RS00950 PF00485 Phosphoribulokinase / Uridine kinase family MF1_RS00955 PF00710 Asparaginase, N-terminal MF1_RS00955 PF17763 Glutaminase/Asparaginase C-terminal domain MF1_RS00960 PF00227 Proteasome subunit MF1_RS00965 PF00004 ATPase family associated with various cellular activities (AAA) MF1_RS00965 PF07724 AAA domain (Cdc48 subfamily) MF1_RS00965 PF10431 C-terminal, D2-small domain, of ClpB protein MF1_RS00970 PF08468 Methyltransferase small domain N-terminal MF1_RS00970 PF05175 Methyltransferase small domain MF1_RS00975 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MF1_RS00975 PF00575 S1 RNA binding domain MF1_RS00975 PF03725 3' exoribonuclease family, domain 2 MF1_RS00975 PF00013 KH domain MF1_RS00975 PF01138 3' exoribonuclease family, domain 1 MF1_RS00980 PF00312 Ribosomal protein S15 MF1_RS00985 PF07690 Major Facilitator Superfamily MF1_RS00995 PF01509 TruB family pseudouridylate synthase (N terminal domain) MF1_RS00995 PF16198 tRNA pseudouridylate synthase B C-terminal domain MF1_RS01000 PF02033 Ribosome-binding factor A MF1_RS01005 PF03144 Elongation factor Tu domain 2 MF1_RS01005 PF04760 Translation initiation factor IF-2, N-terminal region MF1_RS01005 PF08364 Bacterial translation initiation factor IF-2 associated region MF1_RS01005 PF11987 Translation-initiation factor 2 MF1_RS01005 PF00009 Elongation factor Tu GTP binding domain MF1_RS01015 PF00575 S1 RNA binding domain MF1_RS01015 PF08529 NusA N-terminal domain MF1_RS01015 PF13184 NusA-like KH domain MF1_RS01020 PF17384 RimP C-terminal SH3 domain MF1_RS01020 PF02576 RimP N-terminal domain MF1_RS01025 PF02390 Putative methyltransferase MF1_RS01030 PF02772 S-adenosylmethionine synthetase, central domain MF1_RS01030 PF00438 S-adenosylmethionine synthetase, N-terminal domain MF1_RS01030 PF02773 S-adenosylmethionine synthetase, C-terminal domain MF1_RS01035 PF01381 Helix-turn-helix MF1_RS01040 PF00795 Carbon-nitrogen hydrolase MF1_RS01045 PF00571 CBS domain MF1_RS01045 PF03471 Transporter associated domain MF1_RS01050 PF02130 Uncharacterized protein family UPF0054 MF1_RS01055 PF02562 PhoH-like protein MF1_RS01060 PF00919 Uncharacterized protein family UPF0004 MF1_RS01060 PF04055 Radical SAM superfamily MF1_RS01070 PF00814 Glycoprotease family MF1_RS01080 PF02132 RecR protein MF1_RS01080 PF13662 Toprim domain MF1_RS01085 PF02575 YbaB/EbfC DNA-binding family MF1_RS01090 PF12170 DNA polymerase III tau subunit V interacting with alpha MF1_RS01090 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MF1_RS01090 PF12169 DNA polymerase III subunits gamma and tau domain III MF1_RS01110 PF02348 Cytidylyltransferase MF1_RS01115 PF00034 Cytochrome c MF1_RS01130 PF00899 ThiF family MF1_RS01130 PF00581 Rhodanese-like domain MF1_RS01135 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MF1_RS01135 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MF1_RS01145 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS01150 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS01155 PF00005 ABC transporter MF1_RS01160 PF01895 PhoU domain MF1_RS01170 PF02073 Thermophilic metalloprotease (M29) MF1_RS01175 PF06827 Zinc finger found in FPG and IleRS MF1_RS01175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MF1_RS01175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MF1_RS01195 PF13505 Outer membrane protein beta-barrel domain MF1_RS01200 PF13505 Outer membrane protein beta-barrel domain MF1_RS01205 PF13505 Outer membrane protein beta-barrel domain MF1_RS01210 PF00133 tRNA synthetases class I (I, L, M and V) MF1_RS01210 PF08264 Anticodon-binding domain of tRNA MF1_RS01220 PF14437 MafB19-like deaminase MF1_RS01225 PF01479 S4 domain MF1_RS01225 PF00849 RNA pseudouridylate synthase MF1_RS01240 PF01523 Putative modulator of DNA gyrase MF1_RS01245 PF00459 Inositol monophosphatase family MF1_RS01255 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MF1_RS01260 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MF1_RS01270 PF08676 MutL C terminal dimerisation domain MF1_RS01270 PF01119 DNA mismatch repair protein, C-terminal domain MF1_RS01275 PF00692 dUTPase MF1_RS01280 PF01070 FMN-dependent dehydrogenase MF1_RS01315 PF00324 Amino acid permease MF1_RS01320 PF00005 ABC transporter MF1_RS01325 PF02361 Cobalt transport protein MF1_RS01330 PF02632 BioY family MF1_RS01355 PF00709 Adenylosuccinate synthetase MF1_RS01365 PF04542 Sigma-70 region 2 MF1_RS01365 PF04545 Sigma-70, region 4 MF1_RS01365 PF00140 Sigma-70 factor, region 1.2 MF1_RS01370 PF00849 RNA pseudouridylate synthase MF1_RS01375 PF00171 Aldehyde dehydrogenase family MF1_RS01380 PF09397 Ftsk gamma domain MF1_RS01380 PF01580 FtsK/SpoIIIE family MF1_RS01380 PF17854 FtsK alpha domain MF1_RS01380 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MF1_RS01390 PF13188 PAS domain MF1_RS01390 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS01390 PF13426 PAS domain MF1_RS01390 PF00989 PAS fold MF1_RS01395 PF01741 Large-conductance mechanosensitive channel, MscL MF1_RS01400 PF01180 Dihydroorotate dehydrogenase MF1_RS01410 PF00120 Glutamine synthetase, catalytic domain MF1_RS01415 PF01266 FAD dependent oxidoreductase MF1_RS01420 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MF1_RS01420 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MF1_RS01425 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MF1_RS01435 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MF1_RS01435 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MF1_RS01445 PF04452 RNA methyltransferase MF1_RS01450 PF04107 Glutamate-cysteine ligase family 2(GCS2) MF1_RS01470 PF00462 Glutaredoxin MF1_RS01480 PF13840 ACT domain MF1_RS01480 PF00696 Amino acid kinase family MF1_RS01480 PF01842 ACT domain MF1_RS01485 PF06965 Na+/H+ antiporter 1 MF1_RS01495 PF03600 Citrate transporter MF1_RS01495 PF02080 TrkA-C domain MF1_RS01505 PF01926 50S ribosome-binding GTPase MF1_RS01505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MF1_RS01515 PF00119 ATP synthase A chain MF1_RS01520 PF00137 ATP synthase subunit C MF1_RS01525 PF00430 ATP synthase B/B' CF(0) MF1_RS01530 PF00430 ATP synthase B/B' CF(0) MF1_RS01535 PF05746 DALR anticodon binding domain MF1_RS01535 PF02092 Glycyl-tRNA synthetase beta subunit MF1_RS01540 PF02091 Glycyl-tRNA synthetase alpha subunit MF1_RS01550 PF00348 Polyprenyl synthetase MF1_RS01555 PF08468 Methyltransferase small domain N-terminal MF1_RS01555 PF05175 Methyltransferase small domain MF1_RS01560 PF01343 Peptidase family S49 MF1_RS01560 PF06965 Na+/H+ antiporter 1 MF1_RS01565 PF08544 GHMP kinases C terminal MF1_RS01575 PF00032 Cytochrome b(C-terminal)/b6/petD MF1_RS01575 PF00033 Cytochrome b/b6/petB MF1_RS01595 PF06071 Protein of unknown function (DUF933) MF1_RS01595 PF01926 50S ribosome-binding GTPase MF1_RS01600 PF03734 L,D-transpeptidase catalytic domain MF1_RS01600 PF17969 L,D-transpeptidase C-terminal domain MF1_RS01605 PF01195 Peptidyl-tRNA hydrolase MF1_RS01610 PF01386 Ribosomal L25p family MF1_RS01610 PF14693 Ribosomal protein TL5, C-terminal domain MF1_RS01620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MF1_RS01620 PF14572 Phosphoribosyl synthetase-associated domain MF1_RS01635 PF01790 Prolipoprotein diacylglyceryl transferase MF1_RS01655 PF00672 HAMP domain MF1_RS01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS01655 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS01660 PF00486 Transcriptional regulatory protein, C terminal MF1_RS01660 PF00072 Response regulator receiver domain MF1_RS01665 PF00753 Metallo-beta-lactamase superfamily MF1_RS01675 PF00271 Helicase conserved C-terminal domain MF1_RS01675 PF04851 Type III restriction enzyme, res subunit MF1_RS01675 PF12344 Ultra-violet resistance protein B MF1_RS01675 PF02151 UvrB/uvrC motif MF1_RS01675 PF17757 UvrB interaction domain MF1_RS01685 PF03449 Transcription elongation factor, N-terminal MF1_RS01685 PF01272 Transcription elongation factor, GreA/GreB, C-term MF1_RS01690 PF00534 Glycosyl transferases group 1 MF1_RS01695 PF02386 Cation transport protein MF1_RS01700 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF1_RS01705 PF03466 LysR substrate binding domain MF1_RS01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MF1_RS01715 PF00313 'Cold-shock' DNA-binding domain MF1_RS01720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MF1_RS01720 PF02142 MGS-like domain MF1_RS01720 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MF1_RS01725 PF07690 Major Facilitator Superfamily MF1_RS01730 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MF1_RS01730 PF00117 Glutamine amidotransferase class-I MF1_RS01735 PF04345 Chorismate lyase MF1_RS01750 PF00924 Mechanosensitive ion channel MF1_RS01755 PF08278 DNA primase DnaG DnaB-binding MF1_RS01755 PF01807 CHC2 zinc finger MF1_RS01755 PF08275 DNA primase catalytic core, N-terminal domain MF1_RS01755 PF10410 DnaB-helicase binding domain of primase MF1_RS01760 PF00140 Sigma-70 factor, region 1.2 MF1_RS01760 PF04545 Sigma-70, region 4 MF1_RS01760 PF04546 Sigma-70, non-essential region MF1_RS01760 PF04539 Sigma-70 region 3 MF1_RS01760 PF03979 Sigma-70 factor, region 1.1 MF1_RS01760 PF04542 Sigma-70 region 2 MF1_RS01770 PF04402 Protein of unknown function (DUF541) MF1_RS01810 PF00857 Isochorismatase family MF1_RS01820 PF12848 ABC transporter MF1_RS01820 PF00005 ABC transporter MF1_RS01835 PF01551 Peptidase family M23 MF1_RS01835 PF01464 Transglycosylase SLT domain MF1_RS01835 PF10145 Phage-related minor tail protein MF1_RS01845 PF01795 MraW methylase family MF1_RS01855 PF00905 Penicillin binding protein transpeptidase domain MF1_RS01855 PF03717 Penicillin-binding Protein dimerisation domain MF1_RS01860 PF02875 Mur ligase family, glutamate ligase domain MF1_RS01860 PF08245 Mur ligase middle domain MF1_RS01860 PF01225 Mur ligase family, catalytic domain MF1_RS01865 PF08245 Mur ligase middle domain MF1_RS01865 PF01225 Mur ligase family, catalytic domain MF1_RS01865 PF02875 Mur ligase family, glutamate ligase domain MF1_RS01870 PF00953 Glycosyl transferase family 4 MF1_RS01870 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MF1_RS01875 PF08245 Mur ligase middle domain MF1_RS01880 PF01098 Cell cycle protein MF1_RS01885 PF03033 Glycosyltransferase family 28 N-terminal domain MF1_RS01885 PF04101 Glycosyltransferase family 28 C-terminal domain MF1_RS01890 PF01225 Mur ligase family, catalytic domain MF1_RS01890 PF02875 Mur ligase family, glutamate ligase domain MF1_RS01890 PF08245 Mur ligase middle domain MF1_RS01895 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MF1_RS01895 PF01565 FAD binding domain MF1_RS01900 PF01820 D-ala D-ala ligase N-terminus MF1_RS01900 PF07478 D-ala D-ala ligase C-terminus MF1_RS01905 PF03799 Cell division protein FtsQ MF1_RS01905 PF08478 POTRA domain, FtsQ-type MF1_RS01910 PF02491 SHS2 domain inserted in FTSA MF1_RS01915 PF12327 FtsZ family, C-terminal domain MF1_RS01915 PF00091 Tubulin/FtsZ family, GTPase domain MF1_RS01920 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MF1_RS01925 PF13525 Outer membrane lipoprotein MF1_RS01930 PF02463 RecF/RecN/SMC N terminal domain MF1_RS01935 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MF1_RS01935 PF03120 NAD-dependent DNA ligase OB-fold domain MF1_RS01935 PF12826 Helix-hairpin-helix motif MF1_RS01935 PF00533 BRCA1 C Terminus (BRCT) domain MF1_RS01935 PF01653 NAD-dependent DNA ligase adenylation domain MF1_RS01940 PF00557 Metallopeptidase family M24 MF1_RS01940 PF01321 Creatinase/Prolidase N-terminal domain MF1_RS01950 PF02630 SCO1/SenC MF1_RS01955 PF00580 UvrD/REP helicase N-terminal domain MF1_RS01955 PF13361 UvrD-like helicase C-terminal domain MF1_RS01990 PF00083 Sugar (and other) transporter MF1_RS01995 PF00303 Thymidylate synthase MF1_RS02000 PF00186 Dihydrofolate reductase MF1_RS02015 PF13180 PDZ domain MF1_RS02030 PF13538 UvrD-like helicase C-terminal domain MF1_RS02030 PF14490 Helix-hairpin-helix containing domain MF1_RS02030 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain MF1_RS02035 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MF1_RS02040 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MF1_RS02040 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MF1_RS02045 PF00324 Amino acid permease MF1_RS02060 PF03471 Transporter associated domain MF1_RS02060 PF03741 Integral membrane protein TerC family MF1_RS02070 PF00999 Sodium/hydrogen exchanger family MF1_RS02070 PF02254 TrkA-N domain MF1_RS02075 PF02355 Protein export membrane protein MF1_RS02085 PF00924 Mechanosensitive ion channel MF1_RS02085 PF12795 Mechanosensitive ion channel porin domain MF1_RS02085 PF12794 Mechanosensitive ion channel inner membrane domain 1 MF1_RS02095 PF13505 Outer membrane protein beta-barrel domain MF1_RS02125 PF02321 Outer membrane efflux protein MF1_RS02135 PF08264 Anticodon-binding domain of tRNA MF1_RS02135 PF10458 Valyl tRNA synthetase tRNA binding arm MF1_RS02135 PF00133 tRNA synthetases class I (I, L, M and V) MF1_RS02140 PF00005 ABC transporter MF1_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS02150 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS02155 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF1_RS02165 PF00164 Ribosomal protein S12/S23 MF1_RS02170 PF00177 Ribosomal protein S7p/S5e MF1_RS02175 PF03144 Elongation factor Tu domain 2 MF1_RS02175 PF00009 Elongation factor Tu GTP binding domain MF1_RS02175 PF03764 Elongation factor G, domain IV MF1_RS02175 PF14492 Elongation Factor G, domain II MF1_RS02175 PF00679 Elongation factor G C-terminus MF1_RS02180 PF03143 Elongation factor Tu C-terminal domain MF1_RS02180 PF03144 Elongation factor Tu domain 2 MF1_RS02180 PF00009 Elongation factor Tu GTP binding domain MF1_RS02185 PF00338 Ribosomal protein S10p/S20e MF1_RS02190 PF00297 Ribosomal protein L3 MF1_RS02195 PF00573 Ribosomal protein L4/L1 family MF1_RS02200 PF00276 Ribosomal protein L23 MF1_RS02205 PF00181 Ribosomal Proteins L2, RNA binding domain MF1_RS02205 PF03947 Ribosomal Proteins L2, C-terminal domain MF1_RS02210 PF00203 Ribosomal protein S19 MF1_RS02215 PF00237 Ribosomal protein L22p/L17e MF1_RS02220 PF00189 Ribosomal protein S3, C-terminal domain MF1_RS02220 PF07650 KH domain MF1_RS02225 PF00252 Ribosomal protein L16p/L10e MF1_RS02230 PF00831 Ribosomal L29 protein MF1_RS02235 PF00366 Ribosomal protein S17 MF1_RS02240 PF00238 Ribosomal protein L14p/L23e MF1_RS02245 PF00467 KOW motif MF1_RS02245 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MF1_RS02250 PF00281 Ribosomal protein L5 MF1_RS02250 PF00673 ribosomal L5P family C-terminus MF1_RS02255 PF00253 Ribosomal protein S14p/S29e MF1_RS02260 PF00410 Ribosomal protein S8 MF1_RS02265 PF00347 Ribosomal protein L6 MF1_RS02270 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MF1_RS02275 PF03719 Ribosomal protein S5, C-terminal domain MF1_RS02275 PF00333 Ribosomal protein S5, N-terminal domain MF1_RS02280 PF00327 Ribosomal protein L30p/L7e MF1_RS02285 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MF1_RS02290 PF00344 SecY translocase MF1_RS02300 PF00416 Ribosomal protein S13/S18 MF1_RS02305 PF00411 Ribosomal protein S11 MF1_RS02310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MF1_RS02310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MF1_RS02310 PF01000 RNA polymerase Rpb3/RpoA insert domain MF1_RS02315 PF01196 Ribosomal protein L17 MF1_RS02320 PF17820 PDZ domain MF1_RS02320 PF13180 PDZ domain MF1_RS02325 PF16193 AAA C-terminal domain MF1_RS02325 PF00004 ATPase family associated with various cellular activities (AAA) MF1_RS02325 PF12002 MgsA AAA+ ATPase C terminal MF1_RS02330 PF00154 recA bacterial DNA recombination protein MF1_RS02335 PF02272 DHHA1 domain MF1_RS02335 PF01411 tRNA synthetases class II (A) MF1_RS02335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MF1_RS02340 PF00005 ABC transporter MF1_RS02340 PF00664 ABC transporter transmembrane region MF1_RS02345 PF01479 S4 domain MF1_RS02345 PF00849 RNA pseudouridylate synthase MF1_RS02360 PF03951 Glutamine synthetase, beta-Grasp domain MF1_RS02360 PF00120 Glutamine synthetase, catalytic domain MF1_RS02365 PF00543 Nitrogen regulatory protein P-II MF1_RS02370 PF17760 UvrA interaction domain MF1_RS02370 PF17755 UvrA DNA-binding domain MF1_RS02375 PF00436 Single-strand binding protein family MF1_RS02380 PF03989 DNA gyrase C-terminal domain, beta-propeller MF1_RS02380 PF00521 DNA gyrase/topoisomerase IV, subunit A MF1_RS02385 PF01467 Cytidylyltransferase-like MF1_RS02390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MF1_RS02395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MF1_RS02410 PF07690 Major Facilitator Superfamily MF1_RS02415 PF00180 Isocitrate/isopropylmalate dehydrogenase MF1_RS02430 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MF1_RS02435 PF01063 Amino-transferase class IV MF1_RS02450 PF03485 Arginyl tRNA synthetase N terminal domain MF1_RS02450 PF05746 DALR anticodon binding domain MF1_RS02450 PF00750 tRNA synthetases class I (R) MF1_RS02455 PF13286 Phosphohydrolase-associated domain MF1_RS02455 PF01966 HD domain MF1_RS02460 PF01521 Iron-sulphur cluster biosynthesis MF1_RS02470 PF02683 Cytochrome C biogenesis protein transmembrane region MF1_RS02475 PF14602 Hexapeptide repeat of succinyl-transferase MF1_RS02475 PF12804 MobA-like NTP transferase domain MF1_RS02475 PF00132 Bacterial transferase hexapeptide (six repeats) MF1_RS02480 PF01380 SIS domain MF1_RS02485 PF00271 Helicase conserved C-terminal domain MF1_RS02485 PF00270 DEAD/DEAH box helicase MF1_RS02485 PF17191 RecG wedge domain MF1_RS02490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MF1_RS02490 PF14579 Helix-hairpin-helix motif MF1_RS02490 PF02811 PHP domain MF1_RS02490 PF07733 Bacterial DNA polymerase III alpha NTPase domain MF1_RS02495 PF01494 FAD binding domain MF1_RS02505 PF17941 Polyphosphate kinase C-terminal domain 1 MF1_RS02505 PF13089 Polyphosphate kinase N-terminal domain MF1_RS02505 PF13090 Polyphosphate kinase C-terminal domain 2 MF1_RS02505 PF02503 Polyphosphate kinase middle domain MF1_RS02515 PF01612 3'-5' exonuclease MF1_RS02515 PF00570 HRDC domain MF1_RS02520 PF02938 GAD domain MF1_RS02520 PF00152 tRNA synthetases class II (D, K and N) MF1_RS02520 PF01336 OB-fold nucleic acid binding domain MF1_RS02525 PF03989 DNA gyrase C-terminal domain, beta-propeller MF1_RS02525 PF00521 DNA gyrase/topoisomerase IV, subunit A MF1_RS02530 PF07690 Major Facilitator Superfamily MF1_RS02535 PF00462 Glutaredoxin MF1_RS02545 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MF1_RS02545 PF02769 AIR synthase related protein, C-terminal domain MF1_RS02545 PF00586 AIR synthase related protein, N-terminal domain MF1_RS02555 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase MF1_RS02560 PF01259 SAICAR synthetase MF1_RS02570 PF10397 Adenylosuccinate lyase C-terminus MF1_RS02570 PF00206 Lyase MF1_RS02575 PF00834 Ribulose-phosphate 3 epimerase family MF1_RS02580 PF01613 Flavin reductase like domain MF1_RS02585 PF01258 Prokaryotic dksA/traR C4-type zinc finger MF1_RS02595 PF00072 Response regulator receiver domain MF1_RS02595 PF13188 PAS domain MF1_RS02595 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS02595 PF08448 PAS fold MF1_RS02595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS02600 PF00551 Formyl transferase MF1_RS02605 PF00586 AIR synthase related protein, N-terminal domain MF1_RS02605 PF02769 AIR synthase related protein, C-terminal domain MF1_RS02610 PF01594 AI-2E family transporter MF1_RS02655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MF1_RS02655 PF05698 Bacterial trigger factor protein (TF) C-terminus MF1_RS02655 PF05697 Bacterial trigger factor protein (TF) MF1_RS02660 PF02637 GatB domain MF1_RS02660 PF02934 GatB/GatE catalytic domain MF1_RS02670 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) MF1_RS02680 PF08032 RNA 2'-O ribose methyltransferase substrate binding MF1_RS02680 PF00588 SpoU rRNA Methylase family MF1_RS02700 PF00009 Elongation factor Tu GTP binding domain MF1_RS02700 PF03144 Elongation factor Tu domain 2 MF1_RS02700 PF03143 Elongation factor Tu C-terminal domain MF1_RS02710 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MF1_RS02715 PF00467 KOW motif MF1_RS02715 PF02357 Transcription termination factor nusG MF1_RS02720 PF03946 Ribosomal protein L11, N-terminal domain MF1_RS02720 PF00298 Ribosomal protein L11, RNA binding domain MF1_RS02725 PF00687 Ribosomal protein L1p/L10e family MF1_RS02730 PF00466 Ribosomal protein L10 MF1_RS02735 PF16320 Ribosomal protein L7/L12 dimerisation domain MF1_RS02735 PF00542 Ribosomal protein L7/L12 C-terminal domain MF1_RS02740 PF04563 RNA polymerase beta subunit MF1_RS02740 PF00562 RNA polymerase Rpb2, domain 6 MF1_RS02740 PF10385 RNA polymerase beta subunit external 1 domain MF1_RS02740 PF04560 RNA polymerase Rpb2, domain 7 MF1_RS02740 PF04565 RNA polymerase Rpb2, domain 3 MF1_RS02740 PF04561 RNA polymerase Rpb2, domain 2 MF1_RS02745 PF00623 RNA polymerase Rpb1, domain 2 MF1_RS02745 PF04998 RNA polymerase Rpb1, domain 5 MF1_RS02745 PF04983 RNA polymerase Rpb1, domain 3 MF1_RS02745 PF04997 RNA polymerase Rpb1, domain 1 MF1_RS02745 PF05000 RNA polymerase Rpb1, domain 4 MF1_RS02760 PF03315 Serine dehydratase beta chain MF1_RS02760 PF03313 Serine dehydratase alpha chain MF1_RS02770 PF00768 D-alanyl-D-alanine carboxypeptidase MF1_RS02770 PF07943 Penicillin-binding protein 5, C-terminal domain MF1_RS02775 PF02617 ATP-dependent Clp protease adaptor protein ClpS MF1_RS02780 PF07724 AAA domain (Cdc48 subfamily) MF1_RS02780 PF17871 AAA lid domain MF1_RS02780 PF02861 Clp amino terminal domain, pathogenicity island component MF1_RS02780 PF00004 ATPase family associated with various cellular activities (AAA) MF1_RS02780 PF10431 C-terminal, D2-small domain, of ClpB protein MF1_RS02785 PF01230 HIT domain MF1_RS02800 PF00318 Ribosomal protein S2 MF1_RS02805 PF00889 Elongation factor TS MF1_RS02810 PF00696 Amino acid kinase family MF1_RS02815 PF01765 Ribosome recycling factor MF1_RS02825 PF02163 Peptidase family M50 MF1_RS02825 PF17820 PDZ domain MF1_RS02830 PF07244 Surface antigen variable number repeat MF1_RS02830 PF01103 Surface antigen MF1_RS02835 PF00132 Bacterial transferase hexapeptide (six repeats) MF1_RS02835 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MF1_RS02840 PF07977 FabA-like domain MF1_RS02845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MF1_RS02845 PF00132 Bacterial transferase hexapeptide (six repeats) MF1_RS02855 PF02684 Lipid-A-disaccharide synthetase MF1_RS02860 PF00005 ABC transporter MF1_RS02865 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS02870 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS02875 PF00497 Bacterial extracellular solute-binding proteins, family 3 MF1_RS02880 PF00285 Citrate synthase, C-terminal domain MF1_RS02885 PF00749 tRNA synthetases class I (E and Q), catalytic domain MF1_RS02895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MF1_RS02905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MF1_RS02905 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF1_RS02910 PF01474 Class-II DAHP synthetase family MF1_RS02915 PF02540 NAD synthase MF1_RS02915 PF00795 Carbon-nitrogen hydrolase MF1_RS02920 PF00749 tRNA synthetases class I (E and Q), catalytic domain MF1_RS02925 PF00270 DEAD/DEAH box helicase MF1_RS02925 PF00271 Helicase conserved C-terminal domain MF1_RS02930 PF01513 ATP-NAD kinase MF1_RS02940 PF00221 Aromatic amino acid lyase MF1_RS02950 PF00324 Amino acid permease MF1_RS02960 PF00072 Response regulator receiver domain MF1_RS02965 PF00380 Ribosomal protein S9/S16 MF1_RS02970 PF00572 Ribosomal protein L13 MF1_RS02975 PF01368 DHH family MF1_RS02975 PF02272 DHHA1 domain MF1_RS02975 PF17768 RecJ OB domain MF1_RS02980 PF01751 Toprim domain MF1_RS02980 PF00204 DNA gyrase B MF1_RS02980 PF00986 DNA gyrase B subunit, carboxyl terminus MF1_RS02980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS02985 PF03099 Biotin/lipoate A/B protein ligase family MF1_RS03030 PF00289 Biotin carboxylase, N-terminal domain MF1_RS03030 PF02785 Biotin carboxylase C-terminal domain MF1_RS03030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MF1_RS03035 PF00364 Biotin-requiring enzyme MF1_RS03050 PF01207 Dihydrouridine synthase (Dus) MF1_RS03070 PF03167 Uracil DNA glycosylase superfamily MF1_RS03080 PF00471 Ribosomal protein L33 MF1_RS03085 PF17876 Cold shock domain MF1_RS03085 PF08461 Ribonuclease R winged-helix domain MF1_RS03085 PF08206 Ribonuclease B OB domain MF1_RS03085 PF00773 RNB domain MF1_RS03085 PF00575 S1 RNA binding domain MF1_RS03090 PF01396 Topoisomerase DNA binding C4 zinc finger MF1_RS03090 PF01131 DNA topoisomerase MF1_RS03090 PF01751 Toprim domain MF1_RS03090 PF13368 Topoisomerase C-terminal repeat MF1_RS03100 PF17782 DprA winged helix domain MF1_RS03100 PF02481 DNA recombination-mediator protein A MF1_RS03105 PF02660 Glycerol-3-phosphate acyltransferase MF1_RS03110 PF01979 Amidohydrolase family MF1_RS03115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MF1_RS03115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MF1_RS03125 PF03652 Holliday junction resolvase MF1_RS03130 PF02686 Glu-tRNAGln amidotransferase C subunit MF1_RS03135 PF01425 Amidase MF1_RS03140 PF00005 ABC transporter MF1_RS03145 PF12399 Branched-chain amino acid ATP-binding cassette transporter MF1_RS03145 PF00005 ABC transporter MF1_RS03150 PF02653 Branched-chain amino acid transport system / permease component MF1_RS03150 PF11862 Domain of unknown function (DUF3382) MF1_RS03155 PF02653 Branched-chain amino acid transport system / permease component MF1_RS03165 PF00313 'Cold-shock' DNA-binding domain MF1_RS03175 PF00561 alpha/beta hydrolase fold MF1_RS03185 PF04002 RadC-like JAB domain MF1_RS03190 PF00557 Metallopeptidase family M24 MF1_RS03195 PF17746 SfsA N-terminal OB domain MF1_RS03195 PF03749 Sugar fermentation stimulation protein RE domain MF1_RS03200 PF00588 SpoU rRNA Methylase family MF1_RS03205 PF01177 Asp/Glu/Hydantoin racemase MF1_RS03210 PF01479 S4 domain MF1_RS03210 PF00163 Ribosomal protein S4/S9 N-terminal domain MF1_RS03225 PF00717 Peptidase S24-like MF1_RS03225 PF01726 LexA DNA binding domain MF1_RS03235 PF05036 Sporulation related domain MF1_RS03235 PF03330 Lytic transglycolase MF1_RS03240 PF00768 D-alanyl-D-alanine carboxypeptidase MF1_RS03240 PF07943 Penicillin-binding protein 5, C-terminal domain MF1_RS03245 PF02223 Thymidylate kinase MF1_RS03250 PF09115 DNA polymerase III, delta subunit, C terminal MF1_RS03255 PF09334 tRNA synthetases class I (M) MF1_RS03260 PF01026 TatD related DNase MF1_RS03265 PF12706 Beta-lactamase superfamily domain MF1_RS03265 PF03099 Biotin/lipoate A/B protein ligase family MF1_RS03275 PF01066 CDP-alcohol phosphatidyltransferase MF1_RS03280 PF01494 FAD binding domain MF1_RS03295 PF01883 Iron-sulfur cluster assembly protein MF1_RS03300 PF00266 Aminotransferase class-V MF1_RS03305 PF01458 Uncharacterized protein family (UPF0051) MF1_RS03310 PF00005 ABC transporter MF1_RS03315 PF01458 Uncharacterized protein family (UPF0051) MF1_RS03320 PF00266 Aminotransferase class-V MF1_RS03325 PF02129 X-Pro dipeptidyl-peptidase (S15 family) MF1_RS03330 PF01479 S4 domain MF1_RS03330 PF00579 tRNA synthetases class I (W and Y) MF1_RS03335 PF00578 AhpC/TSA family MF1_RS03345 PF00912 Transglycosylase MF1_RS03345 PF17092 Penicillin-binding protein OB-like domain MF1_RS03345 PF00905 Penicillin binding protein transpeptidase domain MF1_RS03350 PF01520 N-acetylmuramoyl-L-alanine amidase MF1_RS03350 PF11741 AMIN domain MF1_RS03355 PF12111 Polyribonucleotide phosphorylase C terminal MF1_RS03355 PF00575 S1 RNA binding domain MF1_RS03355 PF10150 Ribonuclease E/G family MF1_RS03370 PF00271 Helicase conserved C-terminal domain MF1_RS03370 PF17757 UvrB interaction domain MF1_RS03370 PF03461 TRCF domain MF1_RS03370 PF00270 DEAD/DEAH box helicase MF1_RS03370 PF02559 CarD-like/TRCF domain MF1_RS03375 PF03937 Flavinator of succinate dehydrogenase MF1_RS03380 PF00005 ABC transporter MF1_RS03385 PF02687 FtsX-like permease family MF1_RS03385 PF12704 MacB-like periplasmic core domain MF1_RS03390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MF1_RS03390 PF03129 Anticodon binding domain MF1_RS03395 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MF1_RS03395 PF12706 Beta-lactamase superfamily domain MF1_RS03395 PF17770 Ribonuclease J C-terminal domain MF1_RS03405 PF00361 Proton-conducting membrane transporter MF1_RS03410 PF00361 Proton-conducting membrane transporter MF1_RS03415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MF1_RS03415 PF00361 Proton-conducting membrane transporter MF1_RS03420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MF1_RS03425 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MF1_RS03430 PF12838 4Fe-4S dicluster domain MF1_RS03435 PF00146 NADH dehydrogenase MF1_RS03440 PF00384 Molybdopterin oxidoreductase MF1_RS03440 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal MF1_RS03440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MF1_RS03445 PF10531 SLBB domain MF1_RS03445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MF1_RS03445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MF1_RS03455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MF1_RS03460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MF1_RS03465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MF1_RS03470 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MF1_RS03510 PF01227 GTP cyclohydrolase I MF1_RS03520 PF01809 Putative membrane protein insertion efficiency factor MF1_RS03525 PF03129 Anticodon binding domain MF1_RS03525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MF1_RS03525 PF02824 TGS domain MF1_RS03525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MF1_RS03530 PF13411 MerR HTH family regulatory protein MF1_RS03535 PF00216 Bacterial DNA-binding protein MF1_RS03540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MF1_RS03540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MF1_RS03545 PF02504 Fatty acid synthesis protein MF1_RS03560 PF01029 NusB family MF1_RS03565 PF00885 6,7-dimethyl-8-ribityllumazine synthase MF1_RS03570 PF00677 Lumazine binding domain MF1_RS03575 PF01872 RibD C-terminal domain MF1_RS03575 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MF1_RS03580 PF03477 ATP cone domain MF1_RS03585 PF00464 Serine hydroxymethyltransferase MF1_RS03590 PF01118 Semialdehyde dehydrogenase, NAD binding domain MF1_RS03595 PF02628 Cytochrome oxidase assembly protein MF1_RS03605 PF01926 50S ribosome-binding GTPase MF1_RS03605 PF16360 GTP-binding GTPase Middle Region MF1_RS03605 PF13167 GTP-binding GTPase N-terminal MF1_RS03610 PF17209 Hfq protein MF1_RS03620 PF01515 Phosphate acetyl/butaryl transferase MF1_RS03620 PF00390 Malic enzyme, N-terminal domain MF1_RS03620 PF03949 Malic enzyme, NAD binding domain MF1_RS03625 PF00550 Phosphopantetheine attachment site MF1_RS03630 PF00109 Beta-ketoacyl synthase, N-terminal domain MF1_RS03630 PF02801 Beta-ketoacyl synthase, C-terminal domain MF1_RS03635 PF00109 Beta-ketoacyl synthase, N-terminal domain MF1_RS03635 PF02801 Beta-ketoacyl synthase, C-terminal domain MF1_RS03640 PF00107 Zinc-binding dehydrogenase MF1_RS03640 PF08240 Alcohol dehydrogenase GroES-like domain MF1_RS03665 PF00011 Hsp20/alpha crystallin family MF1_RS03675 PF00072 Response regulator receiver domain MF1_RS03740 PF00216 Bacterial DNA-binding protein MF1_RS03745 PF00004 ATPase family associated with various cellular activities (AAA) MF1_RS03745 PF05362 Lon protease (S16) C-terminal proteolytic domain MF1_RS03745 PF02190 ATP-dependent protease La (LON) substrate-binding domain MF1_RS03750 PF10431 C-terminal, D2-small domain, of ClpB protein MF1_RS03750 PF06689 ClpX C4-type zinc finger MF1_RS03750 PF07724 AAA domain (Cdc48 subfamily) MF1_RS03755 PF00574 Clp protease MF1_RS03765 PF02080 TrkA-C domain MF1_RS03765 PF02254 TrkA-N domain MF1_RS03770 PF02954 Bacterial regulatory protein, Fis family MF1_RS03770 PF00072 Response regulator receiver domain MF1_RS03770 PF00158 Sigma-54 interaction domain MF1_RS03775 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS03775 PF00989 PAS fold MF1_RS03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS03775 PF00672 HAMP domain MF1_RS03780 PF02082 Transcriptional regulator MF1_RS03785 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MF1_RS03785 PF02542 YgbB family MF1_RS03790 PF02464 Competence-damaged protein MF1_RS03790 PF00994 Probable molybdopterin binding domain MF1_RS03790 PF18146 Damage-inducible protein CinA KH domain MF1_RS03795 PF03364 Polyketide cyclase / dehydrase and lipid transport MF1_RS03800 PF04055 Radical SAM superfamily MF1_RS03805 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF1_RS03805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MF1_RS03810 PF02817 e3 binding domain MF1_RS03810 PF00364 Biotin-requiring enzyme MF1_RS03810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MF1_RS03815 PF00364 Biotin-requiring enzyme MF1_RS03815 PF02780 Transketolase, C-terminal domain MF1_RS03815 PF02779 Transketolase, pyrimidine binding domain MF1_RS03820 PF00676 Dehydrogenase E1 component MF1_RS03835 PF03952 Enolase, N-terminal domain MF1_RS03835 PF00113 Enolase, C-terminal TIM barrel domain MF1_RS03840 PF00793 DAHP synthetase I family MF1_RS03845 PF00117 Glutamine amidotransferase class-I MF1_RS03845 PF06418 CTP synthase N-terminus MF1_RS03850 PF03840 Preprotein translocase SecG subunit MF1_RS03855 PF00121 Triosephosphate isomerase MF1_RS03875 PF02699 Preprotein translocase subunit MF1_RS03880 PF01476 LysM domain MF1_RS03880 PF01551 Peptidase family M23 MF1_RS03890 PF02403 Seryl-tRNA synthetase N-terminal domain MF1_RS03890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MF1_RS03895 PF00902 Sec-independent protein translocase protein (TatC) MF1_RS03900 PF02416 mttA/Hcf106 family MF1_RS03905 PF02416 mttA/Hcf106 family MF1_RS03915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MF1_RS03920 PF01541 GIY-YIG catalytic domain MF1_RS03920 PF12826 Helix-hairpin-helix motif MF1_RS03920 PF02151 UvrB/uvrC motif MF1_RS03920 PF08459 UvrC Helix-hairpin-helix N-terminal MF1_RS03925 PF01066 CDP-alcohol phosphatidyltransferase MF1_RS03930 PF00334 Nucleoside diphosphate kinase MF1_RS03935 PF03212 Pertactin MF1_RS03935 PF16168 Adhesin of bacterial autotransporter system, probable stalk MF1_RS03935 PF13018 Extended Signal Peptide of Type V secretion system MF1_RS03935 PF03797 Autotransporter beta-domain MF1_RS03940 PF07690 Major Facilitator Superfamily MF1_RS03940 PF00083 Sugar (and other) transporter MF1_RS03965 PF04453 LPS transport system D MF1_RS03965 PF03968 OstA-like protein MF1_RS03975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MF1_RS03980 PF00398 Ribosomal RNA adenine dimethylase MF1_RS03985 PF00625 Guanylate kinase MF1_RS03990 PF02618 YceG-like family MF1_RS03995 PF02801 Beta-ketoacyl synthase, C-terminal domain MF1_RS03995 PF00109 Beta-ketoacyl synthase, N-terminal domain MF1_RS04000 PF00550 Phosphopantetheine attachment site MF1_RS04010 PF00698 Acyl transferase domain MF1_RS04015 PF01569 PAP2 superfamily MF1_RS04020 PF01250 Ribosomal protein S6 MF1_RS04025 PF01084 Ribosomal protein S18 MF1_RS04035 PF03948 Ribosomal protein L9, C-terminal domain MF1_RS04035 PF01281 Ribosomal protein L9, N-terminal domain MF1_RS04040 PF03796 DnaB-like helicase C terminal domain MF1_RS04040 PF00772 DnaB-like helicase N terminal domain MF1_RS04045 PF18073 Rubredoxin metal binding domain MF1_RS04045 PF06745 KaiC MF1_RS04055 PF00156 Phosphoribosyl transferase domain MF1_RS04055 PF13537 Glutamine amidotransferase domain MF1_RS04060 PF00106 short chain dehydrogenase MF1_RS04065 PF01066 CDP-alcohol phosphatidyltransferase MF1_RS04070 PF02666 Phosphatidylserine decarboxylase MF1_RS04075 PF00664 ABC transporter transmembrane region MF1_RS04075 PF00005 ABC transporter MF1_RS04085 PF01406 tRNA synthetases class I (C) catalytic domain MF1_RS04095 PF01979 Amidohydrolase family MF1_RS04105 PF01966 HD domain MF1_RS04110 PF02548 Ketopantoate hydroxymethyltransferase MF1_RS04115 PF02569 Pantoate-beta-alanine ligase MF1_RS04120 PF02565 Recombination protein O C terminal MF1_RS04120 PF11967 Recombination protein O N terminal MF1_RS04125 PF07650 KH domain MF1_RS04125 PF01926 50S ribosome-binding GTPase MF1_RS04130 PF00035 Double-stranded RNA binding motif MF1_RS04130 PF14622 Ribonuclease-III-like MF1_RS04135 PF10502 Signal peptidase, peptidase S26 MF1_RS04140 PF01648 4'-phosphopantetheinyl transferase superfamily MF1_RS04150 PF00156 Phosphoribosyl transferase domain MF1_RS04155 PF13291 ACT domain MF1_RS04155 PF04607 Region found in RelA / SpoT proteins MF1_RS04155 PF02824 TGS domain MF1_RS04160 PF01192 RNA polymerase Rpb6 MF1_RS04165 PF03167 Uracil DNA glycosylase superfamily MF1_RS04170 PF01668 SmpB protein MF1_RS04175 PF00701 Dihydrodipicolinate synthetase family MF1_RS04190 PF07715 TonB-dependent Receptor Plug Domain MF1_RS04190 PF00593 TonB dependent receptor MF1_RS04195 PF05171 Haemin-degrading HemS.ChuX domain MF1_RS04200 PF01497 Periplasmic binding protein MF1_RS04205 PF01032 FecCD transport family MF1_RS04210 PF00005 ABC transporter MF1_RS04215 PF13667 ThiC-associated domain MF1_RS04215 PF01964 Radical SAM ThiC family MF1_RS04220 PF01266 FAD dependent oxidoreductase MF1_RS04230 PF05690 Thiazole biosynthesis protein ThiG MF1_RS04235 PF02581 Thiamine monophosphate synthase MF1_RS04240 PF08543 Phosphomethylpyrimidine kinase MF1_RS04250 PF11940 Domain of unknown function (DUF3458) Ig-like fold MF1_RS04250 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MF1_RS04250 PF01433 Peptidase family M1 domain MF1_RS04255 PF00989 PAS fold MF1_RS04255 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS04260 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MF1_RS04260 PF12833 Helix-turn-helix domain MF1_RS04260 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MF1_RS04260 PF02805 Metal binding domain of Ada MF1_RS04265 PF13505 Outer membrane protein beta-barrel domain MF1_RS04270 PF03710 Glutamate-ammonia ligase adenylyltransferase MF1_RS04270 PF08335 GlnD PII-uridylyltransferase MF1_RS04275 PF13426 PAS domain MF1_RS04275 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS04275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS04275 PF00672 HAMP domain MF1_RS04280 PF00072 Response regulator receiver domain MF1_RS04280 PF00486 Transcriptional regulatory protein, C terminal MF1_RS04285 PF13180 PDZ domain MF1_RS04285 PF17820 PDZ domain MF1_RS04290 PF03918 Cytochrome C biogenesis protein MF1_RS04295 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MF1_RS04295 PF01578 Cytochrome C assembly protein MF1_RS04300 PF03100 CcmE MF1_RS04310 PF00989 PAS fold MF1_RS04310 PF00512 His Kinase A (phospho-acceptor) domain MF1_RS04310 PF00672 HAMP domain MF1_RS04310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MF1_RS04310 PF18698 Histidine kinase sensor domain MF1_RS04315 PF00486 Transcriptional regulatory protein, C terminal MF1_RS04315 PF00072 Response regulator receiver domain MF1_RS04325 PF00905 Penicillin binding protein transpeptidase domain MF1_RS04325 PF00912 Transglycosylase MF1_RS04355 PF00005 ABC transporter MF1_RS04365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MF1_RS04365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MF1_RS04370 PF00326 Prolyl oligopeptidase family MF1_RS04370 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MF1_RS04375 PF05443 ROS/MUCR transcriptional regulator protein MF1_RS04380 PF02657 Fe-S metabolism associated domain MF1_RS04400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MF1_RS04400 PF00391 PEP-utilising enzyme, mobile domain MF1_RS04400 PF02896 PEP-utilising enzyme, TIM barrel domain MF1_RS04415 PF00730 HhH-GPD superfamily base excision DNA repair protein MF1_RS04415 PF14815 NUDIX domain MF1_RS04420 PF18755 Restriction Enzyme Adenine Methylase Associated MF1_RS04420 PF01555 DNA methylase MF1_RS04425 PF13419 Haloacid dehalogenase-like hydrolase MF1_RS04455 PF05193 Peptidase M16 inactive domain MF1_RS04455 PF00675 Insulinase (Peptidase family M16) MF1_RS04460 PF13185 GAF domain MF1_RS04460 PF00563 EAL domain MF1_RS04460 PF00990 Diguanylate cyclase, GGDEF domain MF1_RS04465 PF02622 Uncharacterized ACR, COG1678 MF1_RS04470 PF00075 RNase H MF1_RS04480 PF02401 LytB protein MF1_RS04485 PF01040 UbiA prenyltransferase family MF1_RS04495 PF01523 Putative modulator of DNA gyrase MF1_RS04500 PF05958 tRNA (Uracil-5-)-methyltransferase MF1_RS04505 PF05958 tRNA (Uracil-5-)-methyltransferase MF1_RS04510 PF05958 tRNA (Uracil-5-)-methyltransferase MF1_RS04520 PF02780 Transketolase, C-terminal domain MF1_RS04520 PF02779 Transketolase, pyrimidine binding domain MF1_RS04520 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MF1_RS04525 PF02609 Exonuclease VII small subunit MF1_RS04530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MF1_RS04530 PF00925 GTP cyclohydrolase II MF1_RS04535 PF01264 Chorismate synthase MF1_RS04545 PF01556 DnaJ C terminal domain MF1_RS04545 PF00226 DnaJ domain MF1_RS04550 PF01243 Pyridoxamine 5'-phosphate oxidase MF1_RS04550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MF1_RS04555 PF01040 UbiA prenyltransferase family MF1_RS04560 PF02844 Phosphoribosylglycinamide synthetase, N domain MF1_RS04560 PF02843 Phosphoribosylglycinamide synthetase, C domain MF1_RS04560 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MF1_RS04570 PF02913 FAD linked oxidases, C-terminal domain MF1_RS04570 PF01565 FAD binding domain MF1_RS04575 PF01300 Telomere recombination MF1_RS04580 PF01351 Ribonuclease HII MF1_RS04590 PF00588 SpoU rRNA Methylase family MF1_RS04595 PF01743 Poly A polymerase head domain MF1_RS04595 PF12627 Probable RNA and SrmB- binding site of polymerase A MF1_RS04595 PF13735 tRNA nucleotidyltransferase domain 2 putative MF1_RS04600 PF07726 ATPase family associated with various cellular activities (AAA) MF1_RS04600 PF17863 AAA lid domain MF1_RS04625 PF01545 Cation efflux family MF1_RS04625 PF16916 Dimerisation domain of Zinc Transporter MF1_RS04650 PF00072 Response regulator receiver domain MF1_RS04650 PF00486 Transcriptional regulatory protein, C terminal MF1_RS04655 PF10090 Histidine phosphotransferase C-terminal domain MF1_RS04670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MF1_RS04675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MF1_RS04675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MF1_RS04690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF1_RS04690 PF00005 ABC transporter MF1_RS04695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MF1_RS04695 PF00005 ABC transporter MF1_RS04705 PF00528 Binding-protein-dependent transport system inner membrane component MF1_RS04710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF1_RS04715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MF1_RS04725 PF00117 Glutamine amidotransferase class-I MF1_RS04725 PF13673 Acetyltransferase (GNAT) domain MF1_RS04725 PF03352 Methyladenine glycosylase MF1_RS04725 PF00958 GMP synthase C terminal domain MF1_RS04725 PF13302 Acetyltransferase (GNAT) domain MF1_RS04730 PF02601 Exonuclease VII, large subunit MF1_RS04730 PF13742 OB-fold nucleic acid binding domain MF1_RS04740 PF01925 Sulfite exporter TauE/SafE MF1_RS04750 PF01012 Electron transfer flavoprotein domain MF1_RS04755 PF01012 Electron transfer flavoprotein domain MF1_RS04755 PF00766 Electron transfer flavoprotein FAD-binding domain MF1_RS04775 PF02021 Uncharacterised protein family UPF0102 MF1_RS04780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MF1_RS04785 PF01883 Iron-sulfur cluster assembly protein MF1_RS04785 PF10609 NUBPL iron-transfer P-loop NTPase MF1_RS04790 PF00468 Ribosomal protein L34 MF1_RS04795 PF00825 Ribonuclease P MF1_RS04800 PF02096 60Kd inner membrane protein MF1_RS04800 PF14849 YidC periplasmic domain MF1_RS04805 PF01926 50S ribosome-binding GTPase MF1_RS04810 PF00043 Glutathione S-transferase, C-terminal domain MF1_RS04810 PF13417 Glutathione S-transferase, N-terminal domain MF1_RS04815 PF01113 Dihydrodipicolinate reductase, N-terminus MF1_RS04815 PF05173 Dihydrodipicolinate reductase, C-terminus MF1_RS04820 PF00300 Histidine phosphatase superfamily (branch 1) MF1_RS04840 PF02530 Porin subfamily MF1_RS04845 PF01510 N-acetylmuramoyl-L-alanine amidase MF1_RS04850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MF1_RS04890 PF01475 Ferric uptake regulator family MF1_RS04895 PF13533 Biotin-lipoyl like MF1_RS04900 PF07690 Major Facilitator Superfamily MF1_RS04910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MF1_RS04910 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MF1_RS04925 PF00970 Oxidoreductase FAD-binding domain MF1_RS04925 PF00175 Oxidoreductase NAD-binding domain MF1_RS04930 PF01168 Alanine racemase, N-terminal domain MF1_RS04930 PF00842 Alanine racemase, C-terminal domain MF1_RS04935 PF02347 Glycine cleavage system P-protein MF1_RS04940 PF01597 Glycine cleavage H-protein MF1_RS04945 PF01571 Aminomethyltransferase folate-binding domain MF1_RS04945 PF08669 Glycine cleavage T-protein C-terminal barrel domain MF1_RS04955 PF03966 Trm112p-like protein MF1_RS04960 PF02774 Semialdehyde dehydrogenase, dimerisation domain MF1_RS04960 PF01118 Semialdehyde dehydrogenase, NAD binding domain MF1_RS04985 PF01575 MaoC like domain MF1_RS05015 PF03797 Autotransporter beta-domain MF1_RS05025 PF01497 Periplasmic binding protein MF1_RS05030 PF01032 FecCD transport family MF1_RS05035 PF01032 FecCD transport family MF1_RS05040 PF00005 ABC transporter MF1_RS05095 PF01687 Riboflavin kinase MF1_RS05095 PF06574 FAD synthetase MF1_RS05120 PF04956 TrbC/VIRB2 family MF1_RS05125 PF05101 Type IV secretory pathway, VirB3-like protein MF1_RS05130 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MF1_RS05140 PF04610 TrbL/VirB6 plasmid conjugal transfer protein MF1_RS05150 PF04335 VirB8 protein MF1_RS05155 PF03524 Conjugal transfer protein MF1_RS05160 PF03743 Bacterial conjugation TrbI-like protein MF1_RS05165 PF00437 Type II/IV secretion system protein MF1_RS05175 PF02534 Type IV secretory system Conjugative DNA transfer MF1_RS05185 PF18543 Intracellular delivery domain MF1_RS05185 PF02661 Fic/DOC family MF1_RS05205 PF03023 Lipid II flippase MurJ MF1_RS05210 PF00579 tRNA synthetases class I (W and Y) MF1_RS05220 PF01106 NifU-like domain MF1_RS05230 PF00118 TCP-1/cpn60 chaperonin family MF1_RS05235 PF00166 Chaperonin 10 Kd subunit MF1_RS05240 PF10415 Fumarase C C-terminus MF1_RS05240 PF00206 Lyase MF1_RS05245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MF1_RS05245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MF1_RS05245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MF1_RS05245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MF1_RS05250 PF08534 Redoxin MF1_RS05265 PF13393 Histidyl-tRNA synthetase MF1_RS05265 PF03129 Anticodon binding domain MF1_RS05270 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MF1_RS05310 PF01551 Peptidase family M23 MF1_RS05320 PF13581 Histidine kinase-like ATPase domain MF1_RS05320 PF13426 PAS domain MF1_RS05320 PF07568 Histidine kinase MF1_RS05335 PF00072 Response regulator receiver domain MF1_RS05340 PF07536 HWE histidine kinase MF1_RS05340 PF08447 PAS fold MF1_RS05340 PF13426 PAS domain MF1_RS05435 PF10431 C-terminal, D2-small domain, of ClpB protein MF1_RS05435 PF00004 ATPase family associated with various cellular activities (AAA) MF1_RS05435 PF07724 AAA domain (Cdc48 subfamily) MF1_RS05435 PF02861 Clp amino terminal domain, pathogenicity island component MF1_RS05435 PF17871 AAA lid domain MF1_RS05440 PF03884 DNA gyrase inhibitor YacG MF1_RS05445 PF02545 Maf-like protein MF1_RS05450 PF01176 Translation initiation factor 1A / IF-1 MF1_RS05465 PF02600 Disulfide bond formation protein DsbB MF1_RS05475 PF02600 Disulfide bond formation protein DsbB MF1_RS05490 PF00731 AIR carboxylase MF1_RS05495 PF02222 ATP-grasp domain MF1_RS05495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MF1_RS05500 PF00444 Ribosomal protein L36 MF1_RS05535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MF1_RS05630 PF09335 SNARE associated Golgi protein MF1_RS05650 PF00692 dUTPase MF1_RS05660 PF02472 Biopolymer transport protein ExbD/TolR MF1_RS05665 PF01618 MotA/TolQ/ExbB proton channel family MF1_RS05680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MF1_RS05680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MF1_RS05680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MF1_RS05680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MF1_RS05685 PF01434 Peptidase family M41 MF1_RS05685 PF06480 FtsH Extracellular MF1_RS05685 PF00004 ATPase family associated with various cellular activities (AAA) MF1_RS05685 PF17862 AAA+ lid domain MF1_RS05690 PF01171 PP-loop family MF1_RS05705 PF00691 OmpA family MF1_RS05715 PF01709 Transcriptional regulator MF1_RS05730 PF04052 TolB amino-terminal domain MF1_RS05730 PF07676 WD40-like Beta Propeller Repeat MF1_RS05740 PF02472 Biopolymer transport protein ExbD/TolR MF1_RS05745 PF01618 MotA/TolQ/ExbB proton channel family MF1_RS05750 PF03061 Thioesterase superfamily MF1_RS05755 PF05491 RuvB C-terminal winged helix domain MF1_RS05755 PF05496 Holliday junction DNA helicase RuvB P-loop domain MF1_RS05755 PF17864 RuvB AAA lid domain MF1_RS05760 PF07499 RuvA, C-terminal domain MF1_RS05760 PF01330 RuvA N terminal domain MF1_RS05765 PF02075 Crossover junction endodeoxyribonuclease RuvC MF1_RS05795 PF08207 Elongation factor P (EF-P) KOW-like domain MF1_RS05795 PF01132 Elongation factor P (EF-P) OB domain MF1_RS05795 PF09285 Elongation factor P, C-terminal MF1_RS05800 PF00459 Inositol monophosphatase family MF1_RS05805 PF00664 ABC transporter transmembrane region MF1_RS05805 PF00005 ABC transporter MF1_RS05810 PF01197 Ribosomal protein L31 MF1_RS05815 PF00274 Fructose-bisphosphate aldolase class-I MF1_RS05820 PF00162 Phosphoglycerate kinase MF1_RS05825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MF1_RS05825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MF1_RS05835 PF02779 Transketolase, pyrimidine binding domain MF1_RS05835 PF00456 Transketolase, thiamine diphosphate binding domain MF1_RS05835 PF02780 Transketolase, C-terminal domain MF1_RS05860 PF00224 Pyruvate kinase, barrel domain MF1_RS05860 PF02887 Pyruvate kinase, alpha/beta domain MF1_RS05870 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) MF1_RS05890 PF01435 Peptidase family M48 MF1_RS05895 PF04542 Sigma-70 region 2 MF1_RS05895 PF00140 Sigma-70 factor, region 1.2 MF1_RS05895 PF04545 Sigma-70, region 4 MF1_RS05905 PF00037 4Fe-4S binding domain MF1_RS05905 PF11953 Domain of unknown function (DUF3470) MF1_RS05915 PF01783 Ribosomal L32p protein family MF1_RS05920 PF00348 Polyprenyl synthetase MF1_RS05925 PF04551 GcpE protein MF1_RS05935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF1_RS05935 PF00529 HlyD membrane-fusion protein of T1SS MF1_RS05945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MF1_RS05950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MF1_RS05950 PF02874 ATP synthase alpha/beta family, beta-barrel domain MF1_RS05955 PF00231 ATP synthase MF1_RS05960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MF1_RS05960 PF00306 ATP synthase alpha/beta chain, C terminal domain MF1_RS05960 PF02874 ATP synthase alpha/beta family, beta-barrel domain MF1_RS05965 PF00213 ATP synthase delta (OSCP) subunit MF1_RS05975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MF1_RS05975 PF17764 3′ DNA-binding domain (3′BD) MF1_RS05975 PF00270 DEAD/DEAH box helicase MF1_RS05975 PF18074 Primosomal protein N C-terminal domain MF1_RS05980 PF00923 Transaldolase/Fructose-6-phosphate aldolase MF1_RS05990 PF00133 tRNA synthetases class I (I, L, M and V) MF1_RS05990 PF13603 Leucyl-tRNA synthetase, Domain 2 MF1_RS05990 PF08264 Anticodon-binding domain of tRNA MF1_RS05995 PF01168 Alanine racemase, N-terminal domain MF1_RS06000 PF00501 AMP-binding enzyme MF1_RS06000 PF16177 Acetyl-coenzyme A synthetase N-terminus MF1_RS06000 PF13193 AMP-binding enzyme C-terminal domain MF1_RS06005 PF00005 ABC transporter MF1_RS06020 PF00005 ABC transporter MF1_RS06020 PF02687 FtsX-like permease family MF1_RS06020 PF12704 MacB-like periplasmic core domain MF1_RS06025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MF1_RS06030 PF02321 Outer membrane efflux protein MF1_RS06045 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MF1_RS06045 PF01580 FtsK/SpoIIIE family MF1_RS06045 PF09397 Ftsk gamma domain MF1_RS06045 PF17854 FtsK alpha domain MF1_RS06050 PF01494 FAD binding domain MF1_RS06095 PF05101 Type IV secretory pathway, VirB3-like protein MF1_RS06100 PF03135 CagE, TrbE, VirB family, component of type IV transporter system MF1_RS06135 PF04335 VirB8 protein MF1_RS06140 PF03524 Conjugal transfer protein MF1_RS06145 PF03743 Bacterial conjugation TrbI-like protein MF1_RS06150 PF00437 Type II/IV secretion system protein MF1_RS06155 PF13085 2Fe-2S iron-sulfur cluster binding domain MF1_RS06155 PF13237 4Fe-4S dicluster domain MF1_RS06160 PF00890 FAD binding domain MF1_RS06160 PF02910 Fumarate reductase flavoprotein C-term MF1_RS06165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MF1_RS06175 PF01245 Ribosomal protein L19 MF1_RS06180 PF01746 tRNA (Guanine-1)-methyltransferase MF1_RS06185 PF05239 PRC-barrel domain MF1_RS06185 PF01782 RimM N-terminal domain MF1_RS06195 PF00589 Phage integrase family MF1_RS06195 PF02899 Phage integrase, N-terminal SAM-like domain MF1_RS06200 PF01722 BolA-like protein MF1_RS06205 PF00226 DnaJ domain MF1_RS06210 PF07728 AAA domain (dynein-related subfamily) MF1_RS06210 PF08406 CbbQ/NirQ/NorQ C-terminal MF1_RS06210 PF12556 Cobaltochelatase CobS subunit N terminal MF1_RS06215 PF11775 Cobalamin biosynthesis protein CobT VWA domain MF1_RS06215 PF06213 Cobalamin biosynthesis protein CobT MF1_RS06225 PF00830 Ribosomal L28 family MF1_RS06235 PF01808 AICARFT/IMPCHase bienzyme MF1_RS06235 PF02142 MGS-like domain MF1_RS06245 PF01189 16S rRNA methyltransferase RsmB/F MF1_RS06245 PF01029 NusB family MF1_RS06250 PF01435 Peptidase family M48 MF1_RS06255 PF07896 Protein of unknown function (DUF1674) MF1_RS06260 PF00886 Ribosomal protein S16 MF1_RS06270 PF02978 Signal peptide binding domain MF1_RS06270 PF02881 SRP54-type protein, helical bundle domain MF1_RS06270 PF00448 SRP54-type protein, GTPase domain MF1_RS06280 PF05088 Bacterial NAD-glutamate dehydrogenase MF1_RS06290 PF00117 Glutamine amidotransferase class-I MF1_RS06305 PF00814 Glycoprotease family MF1_RS06315 PF00072 Response regulator receiver domain MF1_RS06315 PF00486 Transcriptional regulatory protein, C terminal MF1_RS06330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MF1_RS06330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MF1_RS06345 PF08534 Redoxin MF1_RS06355 PF02153 Prephenate dehydrogenase MF1_RS06385 PF08543 Phosphomethylpyrimidine kinase MF1_RS06395 PF00768 D-alanyl-D-alanine carboxypeptidase MF1_RS06395 PF07943 Penicillin-binding protein 5, C-terminal domain MF1_RS06405 PF03734 L,D-transpeptidase catalytic domain MF1_RS06410 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MF1_RS06415 PF00589 Phage integrase family MF1_RS06415 PF02899 Phage integrase, N-terminal SAM-like domain MF1_RS06420 PF01202 Shikimate kinase MF1_RS06425 PF01761 3-dehydroquinate synthase MF1_RS06440 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme MF1_RS06450 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) MF1_RS06455 PF01899 Na+/H+ ion antiporter subunit MF1_RS06460 PF00361 Proton-conducting membrane transporter MF1_RS06465 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MF1_RS06470 PF13244 Domain of unknown function (DUF4040) MF1_RS06470 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter MF1_RS06470 PF00361 Proton-conducting membrane transporter MF1_RS06470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MF1_RS06480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MF1_RS06485 PF03435 Saccharopine dehydrogenase NADP binding domain MF1_RS06485 PF16653 Saccharopine dehydrogenase C-terminal domain MF1_RS06490 PF07992 Pyridine nucleotide-disulphide oxidoreductase MF1_RS06490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MF1_RS06495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MF1_RS06495 PF00364 Biotin-requiring enzyme MF1_RS06495 PF02817 e3 binding domain MF1_RS06500 PF16870 2-oxoglutarate dehydrogenase C-terminal MF1_RS06500 PF02779 Transketolase, pyrimidine binding domain MF1_RS06500 PF00676 Dehydrogenase E1 component MF1_RS06500 PF16078 2-oxoglutarate dehydrogenase N-terminus MF1_RS06505 PF02629 CoA binding domain MF1_RS06505 PF00549 CoA-ligase MF1_RS06510 PF08442 ATP-grasp domain MF1_RS06510 PF00549 CoA-ligase MF1_RS06515 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MF1_RS06515 PF00056 lactate/malate dehydrogenase, NAD binding domain MF1_RS06520 PF03969 AFG1-like ATPase MF1_RS06525 PF02974 Protease inhibitor Inh MF1_RS06530 PF01678 Diaminopimelate epimerase MF1_RS06535 PF00919 Uncharacterized protein family UPF0004 MF1_RS06535 PF04055 Radical SAM superfamily MF1_RS06540 PF00448 SRP54-type protein, GTPase domain MF1_RS06540 PF02881 SRP54-type protein, helical bundle domain MF1_RS06545 PF04279 Intracellular septation protein A MF1_RS06550 PF16123 Hydroxyacylglutathione hydrolase C-terminus MF1_RS06550 PF00753 Metallo-beta-lactamase superfamily MF1_RS06555 PF17762 HTH domain found in ParB protein MF1_RS06555 PF02195 ParB-like nuclease domain MF1_RS06560 PF13614 AAA domain MF1_RS06565 PF02527 rRNA small subunit methyltransferase G MF1_RS06570 PF01134 Glucose inhibited division protein A MF1_RS06570 PF13932 GidA associated domain MF1_RS06575 PF01926 50S ribosome-binding GTPase MF1_RS06575 PF12631 MnmE helical domain MF1_RS06575 PF10396 GTP-binding protein TrmE N-terminus MF1_RS06580 PF07497 Rho termination factor, RNA-binding domain MF1_RS06580 PF07498 Rho termination factor, N-terminal domain MF1_RS06580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain