RM11_RS00005 PF03618 RM11_RS00005 RM11_RS00010 PF02545 Maf-like protein RM11_RS00015 PF01488 Shikimate / quinate 5-dehydrogenase RM11_RS00015 PF08501 Shikimate dehydrogenase substrate binding domain RM11_RS00020 PF01121 Dephospho-CoA kinase RM11_RS00025 PF00929 Exonuclease RM11_RS00030 PF00476 DNA polymerase family A RM11_RS00030 PF01367 5'-3' exonuclease, C-terminal SAM fold RM11_RS00030 PF01612 3'-5' exonuclease RM11_RS00030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RM11_RS00035 PF03372 Endonuclease/Exonuclease/phosphatase family RM11_RS00040 PF01027 Inhibitor of apoptosis-promoting Bax1 RM11_RS00050 PF01252 RM11_RS00050 RM11_RS00055 PF00588 SpoU rRNA Methylase family RM11_RS00055 PF08032 RNA 2'-O ribose methyltransferase substrate binding RM11_RS00065 PF06305 RM11_RS00065 RM11_RS00070 PF00216 Bacterial DNA-binding protein RM11_RS00075 PF06835 Lipopolysaccharide-assembly, LptC-related RM11_RS00080 PF03968 OstA-like protein RM11_RS00085 PF00005 ABC transporter RM11_RS00090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RM11_RS00095 PF06776 Invasion associated locus B (IalB) protein RM11_RS00100 PF04055 Radical SAM superfamily RM11_RS00115 PF01921 tRNA synthetases class I (K) RM11_RS00120 PF00009 Elongation factor Tu GTP binding domain RM11_RS00120 PF03144 Elongation factor Tu domain 2 RM11_RS00120 PF16658 RM11_RS00120 RM11_RS00125 PF00085 Thioredoxin RM11_RS00130 PF00580 UvrD/REP helicase N-terminal domain RM11_RS00130 PF12705 PD-(D/E)XK nuclease superfamily RM11_RS00130 PF13361 UvrD-like helicase C-terminal domain RM11_RS00135 PF12705 PD-(D/E)XK nuclease superfamily RM11_RS00140 PF01636 Phosphotransferase enzyme family RM11_RS00140 PF02367 Uncharacterised P-loop hydrolase UPF0079 RM11_RS00145 PF00512 His Kinase A (phospho-acceptor) domain RM11_RS00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS00145 PF12860 RM11_RS00145 RM11_RS00145 PF13188 PAS domain RM11_RS00150 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RM11_RS00150 PF05221 S-adenosyl-L-homocysteine hydrolase RM11_RS00160 PF01370 NAD dependent epimerase/dehydratase family RM11_RS00165 PF08245 Mur ligase middle domain RM11_RS00170 PF01039 Carboxyl transferase domain RM11_RS00180 PF02441 Flavoprotein RM11_RS00180 PF04127 DNA / pantothenate metabolism flavoprotein RM11_RS00185 PF03109 RM11_RS00185 RM11_RS00190 PF01209 ubiE/COQ5 methyltransferase family RM11_RS00195 PF00204 DNA gyrase B RM11_RS00195 PF00986 DNA gyrase B subunit, carboxyl terminus RM11_RS00195 PF01751 Toprim domain RM11_RS00195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS00200 PF00497 Bacterial extracellular solute-binding proteins, family 3 RM11_RS00215 PF04357 RM11_RS00215 RM11_RS00220 PF00005 ABC transporter RM11_RS00220 PF00664 ABC transporter transmembrane region RM11_RS00225 PF00707 Translation initiation factor IF-3, C-terminal domain RM11_RS00225 PF05198 Translation initiation factor IF-3, N-terminal domain RM11_RS00230 PF12146 Putative lysophospholipase RM11_RS00235 PF01863 Protein of unknown function DUF45 RM11_RS00240 PF01546 Peptidase family M20/M25/M40 RM11_RS00240 PF07687 Peptidase dimerisation domain RM11_RS00245 PF04055 Radical SAM superfamily RM11_RS00245 PF06969 HemN C-terminal domain RM11_RS00250 PF01725 Ham1 family RM11_RS00255 PF01628 HrcA protein C terminal domain RM11_RS00255 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RM11_RS00260 PF01025 GrpE RM11_RS00265 PF02834 LigT like Phosphoesterase RM11_RS00270 PF00381 PTS HPr component phosphorylation site RM11_RS00275 PF03610 PTS system fructose IIA component RM11_RS00280 PF07475 HPr Serine kinase C-terminal domain RM11_RS00285 PF00512 His Kinase A (phospho-acceptor) domain RM11_RS00285 PF00672 HAMP domain RM11_RS00285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS00285 PF13755 RM11_RS00285 RM11_RS00285 PF13756 RM11_RS00285 RM11_RS00290 PF00072 Response regulator receiver domain RM11_RS00290 PF00486 Transcriptional regulatory protein, C terminal RM11_RS00295 PF01476 LysM domain RM11_RS00295 PF04972 BON domain RM11_RS00305 PF00012 Hsp70 protein RM11_RS00310 PF00226 DnaJ domain RM11_RS00310 PF00684 DnaJ central domain RM11_RS00310 PF01556 DnaJ C terminal domain RM11_RS00315 PF00696 Amino acid kinase family RM11_RS00320 PF00892 EamA-like transporter family RM11_RS00325 PF00009 Elongation factor Tu GTP binding domain RM11_RS00325 PF00679 Elongation factor G C-terminus RM11_RS00325 PF03144 Elongation factor Tu domain 2 RM11_RS00325 PF06421 GTP-binding protein LepA C-terminus RM11_RS00330 PF00132 Bacterial transferase hexapeptide (six repeats) RM11_RS00330 PF14602 Hexapeptide repeat of succinyl-transferase RM11_RS00330 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RM11_RS00335 PF03641 Possible lysine decarboxylase RM11_RS00340 PF01416 tRNA pseudouridine synthase RM11_RS00345 PF00551 Formyl transferase RM11_RS00345 PF02911 Formyl transferase, C-terminal domain RM11_RS00350 PF01327 Polypeptide deformylase RM11_RS00355 PF02646 RM11_RS00355 RM11_RS00360 PF01464 Transglycosylase SLT domain RM11_RS00365 PF06620 RM11_RS00365 RM11_RS00370 PF00011 Hsp20/alpha crystallin family RM11_RS00375 PF00633 Helix-hairpin-helix motif RM11_RS00375 PF00730 HhH-GPD superfamily base excision DNA repair protein RM11_RS00380 PF01632 Ribosomal protein L35 RM11_RS00385 PF00453 Ribosomal protein L20 RM11_RS00390 PF01409 tRNA synthetases class II core domain (F) RM11_RS00390 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RM11_RS00395 PF01588 Putative tRNA binding domain RM11_RS00395 PF03147 Ferredoxin-fold anticodon binding domain RM11_RS00395 PF03483 B3/4 domain RM11_RS00395 PF03484 tRNA synthetase B5 domain RM11_RS00400 PF01297 Periplasmic solute binding protein family RM11_RS00405 PF00005 ABC transporter RM11_RS00410 PF00950 RM11_RS00410 RM11_RS00415 PF00950 RM11_RS00415 RM11_RS00420 PF04304 RM11_RS00420 RM11_RS00425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RM11_RS00430 PF06165 Glycosyltransferase family 36 RM11_RS00430 PF10091 Putative glucoamylase RM11_RS00430 PF17167 RM11_RS00430 RM11_RS00435 PF00575 S1 RNA binding domain RM11_RS00440 PF02224 Cytidylate kinase RM11_RS00445 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RM11_RS00450 PF09538 RM11_RS00450 RM11_RS00460 PF00488 MutS domain V RM11_RS00460 PF01624 MutS domain I RM11_RS00460 PF05188 MutS domain II RM11_RS00460 PF05190 MutS family domain IV RM11_RS00460 PF05192 MutS domain III RM11_RS00465 PF00390 Malic enzyme, N-terminal domain RM11_RS00465 PF01515 Phosphate acetyl/butaryl transferase RM11_RS00465 PF03949 Malic enzyme, NAD binding domain RM11_RS00470 PF02556 Preprotein translocase subunit SecB RM11_RS00475 PF04186 RM11_RS00475 RM11_RS00480 PF04280 Tim44-like domain RM11_RS00490 PF01430 Hsp33 protein RM11_RS00500 PF00202 Aminotransferase class-III RM11_RS00505 PF07750 RM11_RS00505 RM11_RS00510 PF08534 Redoxin RM11_RS00520 PF01578 RM11_RS00520 RM11_RS00525 PF03379 RM11_RS00525 RM11_RS00530 PF00005 ABC transporter RM11_RS00535 PF00330 Aconitase family (aconitate hydratase) RM11_RS00535 PF00694 Aconitase C-terminal domain RM11_RS00540 PF01649 Ribosomal protein S20 RM11_RS00545 PF00308 Bacterial dnaA protein RM11_RS00545 PF08299 Bacterial dnaA protein helix-turn-helix RM11_RS00545 PF11638 DnaA N-terminal domain RM11_RS00550 PF00712 DNA polymerase III beta subunit, N-terminal domain RM11_RS00550 PF02767 DNA polymerase III beta subunit, central domain RM11_RS00550 PF02768 DNA polymerase III beta subunit, C-terminal domain RM11_RS00555 PF02463 RecF/RecN/SMC N terminal domain RM11_RS00560 PF01220 Dehydroquinase class II RM11_RS00565 PF06481 COX Aromatic Rich Motif RM11_RS00570 PF00115 Cytochrome C and Quinol oxidase polypeptide I RM11_RS00575 PF00510 Cytochrome c oxidase subunit III RM11_RS00585 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RM11_RS00585 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RM11_RS00590 PF13561 Enoyl-(Acyl carrier protein) reductase RM11_RS00595 PF00109 Beta-ketoacyl synthase, N-terminal domain RM11_RS00595 PF02801 Beta-ketoacyl synthase, C-terminal domain RM11_RS00600 PF07977 FabA-like domain RM11_RS00605 PF01475 Ferric uptake regulator family RM11_RS00610 PF06347 Bacterial SH3 domain RM11_RS00615 PF01165 Ribosomal protein S21 RM11_RS00630 PF16576 RM11_RS00630 RM11_RS00635 PF00873 AcrB/AcrD/AcrF family RM11_RS00640 PF00342 Phosphoglucose isomerase RM11_RS00650 PF00829 Ribosomal prokaryotic L21 protein RM11_RS00655 PF01016 Ribosomal L27 protein RM11_RS00660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RM11_RS00660 PF00381 PTS HPr component phosphorylation site RM11_RS00660 PF00391 PEP-utilising enzyme, mobile domain RM11_RS00660 PF02896 PEP-utilising enzyme, TIM barrel domain RM11_RS00660 PF05524 PEP-utilising enzyme, N-terminal RM11_RS00675 PF03895 YadA-like C-terminal region RM11_RS00675 PF05662 Coiled stalk of trimeric autotransporter adhesin RM11_RS00680 PF03895 YadA-like C-terminal region RM11_RS00680 PF05658 Head domain of trimeric autotransporter adhesin RM11_RS00680 PF05662 Coiled stalk of trimeric autotransporter adhesin RM11_RS00685 PF03895 YadA-like C-terminal region RM11_RS00685 PF05662 Coiled stalk of trimeric autotransporter adhesin RM11_RS00690 PF06776 Invasion associated locus B (IalB) protein RM11_RS00710 PF01728 FtsJ-like methyltransferase RM11_RS00715 PF01018 GTP1/OBG RM11_RS00715 PF01926 50S ribosome-binding GTPase RM11_RS00720 PF00696 Amino acid kinase family RM11_RS00720 PF01472 PUA domain RM11_RS00725 PF00171 Aldehyde dehydrogenase family RM11_RS00730 PF01467 Cytidylyltransferase RM11_RS00745 PF01551 Peptidase family M23 RM11_RS00750 PF03572 Peptidase family S41 RM11_RS00750 PF13180 PDZ domain RM11_RS00755 PF00293 NUDIX domain RM11_RS00760 PF06776 Invasion associated locus B (IalB) protein RM11_RS00765 PF02325 RM11_RS00765 RM11_RS00770 PF02594 Uncharacterised ACR, YggU family COG1872 RM11_RS00775 PF00719 Inorganic pyrophosphatase RM11_RS00780 PF00009 Elongation factor Tu GTP binding domain RM11_RS00780 PF00679 Elongation factor G C-terminus RM11_RS00780 PF03144 Elongation factor Tu domain 2 RM11_RS00785 PF00571 CBS domain RM11_RS00785 PF01769 Divalent cation transporter RM11_RS00785 PF03448 MgtE intracellular N domain RM11_RS00795 PF04311 RM11_RS00795 RM11_RS00800 PF01471 Putative peptidoglycan binding domain RM11_RS00800 PF13406 Transglycosylase SLT domain RM11_RS00805 PF00483 Nucleotidyl transferase RM11_RS00810 PF00571 CBS domain RM11_RS00810 PF01380 SIS domain RM11_RS00820 PF00072 Response regulator receiver domain RM11_RS00820 PF02954 Bacterial regulatory protein, Fis family RM11_RS00820 PF14532 Sigma-54 interaction domain RM11_RS00825 PF13091 PLD-like domain RM11_RS00830 PF00478 IMP dehydrogenase / GMP reductase domain RM11_RS00830 PF00571 CBS domain RM11_RS00835 PF01189 NOL1/NOP2/sun family RM11_RS00840 PF00117 Glutamine amidotransferase class-I RM11_RS00840 PF00958 GMP synthase C terminal domain RM11_RS00840 PF02540 NAD synthase RM11_RS00845 PF03009 Glycerophosphoryl diester phosphodiesterase family RM11_RS00850 PF00005 ABC transporter RM11_RS00855 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS00860 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS00865 PF13416 Bacterial extracellular solute-binding protein RM11_RS00870 PF01297 Periplasmic solute binding protein family RM11_RS00875 PF00950 RM11_RS00875 RM11_RS00880 PF00005 ABC transporter RM11_RS00885 PF00462 Glutaredoxin RM11_RS00890 PF07972 NrdI Flavodoxin like RM11_RS00895 PF00317 Ribonucleotide reductase, all-alpha domain RM11_RS00895 PF02867 Ribonucleotide reductase, barrel domain RM11_RS00895 PF08343 Ribonucleotide reductase N-terminal RM11_RS00900 PF00268 Ribonucleotide reductase, small chain RM11_RS00905 PF05175 Methyltransferase small domain RM11_RS00910 PF00472 RF-1 domain RM11_RS00910 PF03462 PCRF domain RM11_RS00915 PF01475 Ferric uptake regulator family RM11_RS00920 PF01043 SecA preprotein cross-linking domain RM11_RS00920 PF02810 SEC-C motif RM11_RS00920 PF07516 SecA Wing and Scaffold domain RM11_RS00920 PF07517 SecA DEAD-like domain RM11_RS00925 PF13616 PPIC-type PPIASE domain RM11_RS00930 PF01960 ArgJ family RM11_RS00935 PF00293 NUDIX domain RM11_RS00940 PF00877 NlpC/P60 family RM11_RS00945 PF00883 Cytosol aminopeptidase family, catalytic domain RM11_RS00950 PF00485 Phosphoribulokinase / Uridine kinase family RM11_RS00955 PF00710 Asparaginase RM11_RS00960 PF00227 Proteasome subunit RM11_RS00965 PF00004 ATPase family associated with various cellular activities (AAA) RM11_RS00965 PF07724 AAA domain (Cdc48 subfamily) RM11_RS00965 PF10431 C-terminal, D2-small domain, of ClpB protein RM11_RS00970 PF05175 Methyltransferase small domain RM11_RS00975 PF00013 KH domain RM11_RS00975 PF00575 S1 RNA binding domain RM11_RS00975 PF01138 3' exoribonuclease family, domain 1 RM11_RS00975 PF03725 3' exoribonuclease family, domain 2 RM11_RS00975 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RM11_RS00980 PF00312 Ribosomal protein S15 RM11_RS00985 PF05977 Transmembrane secretion effector RM11_RS00990 PF01509 TruB family pseudouridylate synthase (N terminal domain) RM11_RS00990 PF16198 RM11_RS00990 RM11_RS00995 PF02033 Ribosome-binding factor A RM11_RS01000 PF00009 Elongation factor Tu GTP binding domain RM11_RS01000 PF03144 Elongation factor Tu domain 2 RM11_RS01000 PF04760 Translation initiation factor IF-2, N-terminal region RM11_RS01000 PF08364 RM11_RS01000 RM11_RS01000 PF11987 Translation-initiation factor 2 RM11_RS01010 PF00575 S1 RNA binding domain RM11_RS01010 PF08529 NusA N-terminal domain RM11_RS01010 PF13184 NusA-like KH domain RM11_RS01010 PF14520 Helix-hairpin-helix domain RM11_RS01015 PF02576 Uncharacterised BCR, YhbC family COG0779 RM11_RS01020 PF02390 Putative methyltransferase RM11_RS01030 PF01381 Helix-turn-helix RM11_RS01035 PF00795 Carbon-nitrogen hydrolase RM11_RS01040 PF00571 CBS domain RM11_RS01040 PF03471 Transporter associated domain RM11_RS01045 PF02130 Uncharacterized protein family UPF0054 RM11_RS01050 PF02562 PhoH-like protein RM11_RS01055 PF00919 Uncharacterized protein family UPF0004 RM11_RS01055 PF04055 Radical SAM superfamily RM11_RS01060 PF00583 Acetyltransferase (GNAT) family RM11_RS01065 PF00814 Glycoprotease family RM11_RS01075 PF02132 RecR protein RM11_RS01075 PF13662 Toprim domain RM11_RS01080 PF02575 YbaB/EbfC DNA-binding family RM11_RS01085 PF12169 DNA polymerase III subunits gamma and tau domain III RM11_RS01085 PF12362 RM11_RS01085 RM11_RS01085 PF13177 DNA polymerase III, delta subunit RM11_RS01100 PF02348 Cytidylyltransferase RM11_RS01105 PF00034 Cytochrome c RM11_RS01125 PF00899 ThiF family RM11_RS01130 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RM11_RS01130 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RM11_RS01135 PF12849 PBP superfamily domain RM11_RS01145 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS01145 PF11812 RM11_RS01145 RM11_RS01150 PF00005 ABC transporter RM11_RS01155 PF01895 PhoU domain RM11_RS01160 PF07486 Cell Wall Hydrolase RM11_RS01165 PF02073 Thermophilic metalloprotease (M29) RM11_RS01170 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RM11_RS01170 PF06827 Zinc finger found in FPG and IleRS RM11_RS01170 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RM11_RS01175 PF01546 Peptidase family M20/M25/M40 RM11_RS01175 PF07687 Peptidase dimerisation domain RM11_RS01180 PF01612 3'-5' exonuclease RM11_RS01190 PF13505 Outer membrane protein beta-barrel domain RM11_RS01195 PF13505 Outer membrane protein beta-barrel domain RM11_RS01200 PF13505 Outer membrane protein beta-barrel domain RM11_RS01205 PF00133 tRNA synthetases class I (I, L, M and V) RM11_RS01205 PF08264 Anticodon-binding domain of tRNA RM11_RS01215 PF14437 RM11_RS01215 RM11_RS01220 PF00849 RNA pseudouridylate synthase RM11_RS01220 PF01479 S4 domain RM11_RS01225 PF03602 Conserved hypothetical protein 95 RM11_RS01245 PF01523 Putative modulator of DNA gyrase RM11_RS01250 PF00459 Inositol monophosphatase family RM11_RS01255 PF13773 Domain of unknown function (DUF4170) RM11_RS01260 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RM11_RS01265 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RM11_RS01270 PF09866 RM11_RS01270 RM11_RS01275 PF01119 DNA mismatch repair protein, C-terminal domain RM11_RS01275 PF08676 MutL C terminal dimerisation domain RM11_RS01275 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS01285 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) RM11_RS01290 PF01070 FMN-dependent dehydrogenase RM11_RS01305 PF00959 Phage lysozyme RM11_RS01335 PF00324 Amino acid permease RM11_RS01340 PF00005 ABC transporter RM11_RS01345 PF02361 Cobalt transport protein RM11_RS01350 PF02632 BioY family RM11_RS01380 PF00266 Aminotransferase class-V RM11_RS01385 PF00709 Adenylosuccinate synthetase RM11_RS01395 PF00140 Sigma-70 factor, region 1 RM11_RS01395 PF04542 Sigma-70 region 2 RM11_RS01395 PF04545 Sigma-70, region 4 RM11_RS01400 PF00849 RNA pseudouridylate synthase RM11_RS01400 PF01479 S4 domain RM11_RS01405 PF00171 Aldehyde dehydrogenase family RM11_RS01410 PF01580 FtsK/SpoIIIE family RM11_RS01410 PF09397 Ftsk gamma domain RM11_RS01420 PF00512 His Kinase A (phospho-acceptor) domain RM11_RS01420 PF00989 PAS fold RM11_RS01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS01425 PF01741 Large-conductance mechanosensitive channel, MscL RM11_RS01430 PF01180 Dihydroorotate dehydrogenase RM11_RS01440 PF00120 Glutamine synthetase, catalytic domain RM11_RS01445 PF01266 FAD dependent oxidoreductase RM11_RS01450 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RM11_RS01450 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RM11_RS01455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RM11_RS01460 PF00920 Dehydratase family RM11_RS01465 PF00920 Dehydratase family RM11_RS01470 PF00920 Dehydratase family RM11_RS01480 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RM11_RS01480 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RM11_RS01485 PF05170 RM11_RS01485 RM11_RS01485 PF13502 RM11_RS01485 RM11_RS01490 PF04452 RNA methyltransferase RM11_RS01495 PF04107 Glutamate-cysteine ligase family 2(GCS2) RM11_RS01505 PF00375 Sodium:dicarboxylate symporter family RM11_RS01510 PF13489 Methyltransferase domain RM11_RS01515 PF00156 Phosphoribosyl transferase domain RM11_RS01520 PF00462 Glutaredoxin RM11_RS01525 PF13489 Methyltransferase domain RM11_RS01530 PF00696 Amino acid kinase family RM11_RS01530 PF01842 ACT domain RM11_RS01530 PF13840 ACT domain RM11_RS01535 PF06965 Na+/H+ antiporter 1 RM11_RS01545 PF02080 TrkA-C domain RM11_RS01545 PF03600 Citrate transporter RM11_RS01550 PF09976 Tetratricopeptide repeat RM11_RS01555 PF01926 50S ribosome-binding GTPase RM11_RS01555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RM11_RS01560 PF09527 RM11_RS01560 RM11_RS01565 PF00119 ATP synthase A chain RM11_RS01570 PF00137 ATP synthase subunit C RM11_RS01575 PF00430 ATP synthase B/B' CF(0) RM11_RS01580 PF00430 ATP synthase B/B' CF(0) RM11_RS01585 PF02092 RM11_RS01585 RM11_RS01585 PF05746 DALR anticodon binding domain RM11_RS01590 PF02091 Glycyl-tRNA synthetase alpha subunit RM11_RS01595 PF13181 Tetratricopeptide repeat RM11_RS01595 PF13432 Tetratricopeptide repeat RM11_RS01595 PF14559 Tetratricopeptide repeat RM11_RS01600 PF00348 Polyprenyl synthetase RM11_RS01605 PF05175 Methyltransferase small domain RM11_RS01610 PF01343 Peptidase family S49 RM11_RS01615 PF08544 GHMP kinases C terminal RM11_RS01640 PF05239 PRC-barrel domain RM11_RS01650 PF01926 50S ribosome-binding GTPase RM11_RS01650 PF06071 Protein of unknown function (DUF933) RM11_RS01655 PF03734 L,D-transpeptidase catalytic domain RM11_RS01670 PF01195 Peptidyl-tRNA hydrolase RM11_RS01675 PF01386 Ribosomal L25p family RM11_RS01675 PF14693 Ribosomal protein TL5, C-terminal domain RM11_RS01695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RM11_RS01695 PF14572 Phosphoribosyl synthetase-associated domain RM11_RS01700 PF02578 Multi-copper polyphenol oxidoreductase laccase RM11_RS01705 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase RM11_RS01710 PF01790 RM11_RS01710 RM11_RS01715 PF04380 RM11_RS01715 RM11_RS01725 PF10722 Putative bacterial sensory transduction regulator RM11_RS01730 PF00672 HAMP domain RM11_RS01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS01735 PF00072 Response regulator receiver domain RM11_RS01735 PF00486 Transcriptional regulatory protein, C terminal RM11_RS01740 PF00753 Metallo-beta-lactamase superfamily RM11_RS01745 PF07886 RM11_RS01745 RM11_RS01750 PF01351 Ribonuclease HII RM11_RS01755 PF01300 Telomere recombination RM11_RS01755 PF03481 Putative GTP-binding controlling metal-binding RM11_RS01760 PF01565 FAD binding domain RM11_RS01760 PF02913 FAD linked oxidases, C-terminal domain RM11_RS01770 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RM11_RS01770 PF02843 Phosphoribosylglycinamide synthetase, C domain RM11_RS01770 PF02844 Phosphoribosylglycinamide synthetase, N domain RM11_RS01775 PF01040 UbiA prenyltransferase family RM11_RS01780 PF01243 Pyridoxamine 5'-phosphate oxidase RM11_RS01780 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RM11_RS01785 PF00226 DnaJ domain RM11_RS01785 PF01556 DnaJ C terminal domain RM11_RS01790 PF13561 Enoyl-(Acyl carrier protein) reductase RM11_RS01795 PF01264 Chorismate synthase RM11_RS01800 PF00925 GTP cyclohydrolase II RM11_RS01800 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RM11_RS01805 PF02609 Exonuclease VII small subunit RM11_RS01810 PF02779 Transketolase, pyrimidine binding domain RM11_RS01810 PF02780 Transketolase, C-terminal domain RM11_RS01810 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RM11_RS01835 PF06776 Invasion associated locus B (IalB) protein RM11_RS01840 PF01040 UbiA prenyltransferase family RM11_RS01845 PF02401 LytB protein RM11_RS01855 PF00075 RNase H RM11_RS01865 PF02622 Uncharacterized ACR, COG1678 RM11_RS01870 PF00563 EAL domain RM11_RS01870 PF00990 GGDEF domain RM11_RS01870 PF07696 7TMR-DISM extracellular 2 RM11_RS01870 PF08447 PAS fold RM11_RS01880 PF00675 Insulinase (Peptidase family M16) RM11_RS01880 PF05193 Peptidase M16 inactive domain RM11_RS01890 PF14821 Threonine synthase N terminus RM11_RS01905 PF13419 Haloacid dehalogenase-like hydrolase RM11_RS01910 PF01555 DNA methylase RM11_RS01915 PF00730 HhH-GPD superfamily base excision DNA repair protein RM11_RS01915 PF10576 Iron-sulfur binding domain of endonuclease III RM11_RS01915 PF14815 NUDIX domain RM11_RS01920 PF05258 RM11_RS01920 RM11_RS01925 PF13462 Thioredoxin RM11_RS01930 PF00391 PEP-utilising enzyme, mobile domain RM11_RS01930 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RM11_RS01930 PF02896 PEP-utilising enzyme, TIM barrel domain RM11_RS01935 PF01471 Putative peptidoglycan binding domain RM11_RS01950 PF02657 Fe-S metabolism associated domain RM11_RS01955 PF05443 ROS/MUCR transcriptional regulator protein RM11_RS01960 PF00326 Prolyl oligopeptidase family RM11_RS01960 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RM11_RS01965 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RM11_RS01965 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RM11_RS01975 PF00005 ABC transporter RM11_RS01975 PF00664 ABC transporter transmembrane region RM11_RS01985 PF07386 RM11_RS01985 RM11_RS01995 PF06742 Protein of unknown function (DUF1214) RM11_RS02000 PF00905 Penicillin binding protein transpeptidase domain RM11_RS02000 PF00912 Transglycosylase RM11_RS02010 PF00072 Response regulator receiver domain RM11_RS02010 PF00486 Transcriptional regulatory protein, C terminal RM11_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS02020 PF14559 Tetratricopeptide repeat RM11_RS02025 PF03100 CcmE RM11_RS02030 PF01578 RM11_RS02030 RM11_RS02030 PF16327 RM11_RS02030 RM11_RS02035 PF03918 Cytochrome C biogenesis protein RM11_RS02040 PF13180 PDZ domain RM11_RS02040 PF13365 Trypsin-like peptidase domain RM11_RS02045 PF00072 Response regulator receiver domain RM11_RS02045 PF00486 Transcriptional regulatory protein, C terminal RM11_RS02050 PF00512 His Kinase A (phospho-acceptor) domain RM11_RS02050 PF00672 HAMP domain RM11_RS02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS02055 PF03710 Glutamate-ammonia ligase adenylyltransferase RM11_RS02055 PF08335 GlnD PII-uridylyltransferase RM11_RS02060 PF13505 Outer membrane protein beta-barrel domain RM11_RS02065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RM11_RS02070 PF00512 His Kinase A (phospho-acceptor) domain RM11_RS02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS02070 PF08447 PAS fold RM11_RS02070 PF12860 RM11_RS02070 RM11_RS02075 PF01433 Peptidase family M1 RM11_RS02075 PF11940 Domain of unknown function (DUF3458) RM11_RS02080 PF03167 Uracil DNA glycosylase superfamily RM11_RS02085 PF08543 Phosphomethylpyrimidine kinase RM11_RS02090 PF02581 Thiamine monophosphate synthase/TENI RM11_RS02095 PF05690 Thiazole biosynthesis protein ThiG RM11_RS02100 PF02597 ThiS family RM11_RS02105 PF01266 FAD dependent oxidoreductase RM11_RS02115 PF00005 ABC transporter RM11_RS02120 PF01032 FecCD transport family RM11_RS02125 PF01497 Periplasmic binding protein RM11_RS02130 PF05171 Haemin-degrading HemS RM11_RS02135 PF00593 TonB dependent receptor RM11_RS02135 PF07715 TonB-dependent Receptor Plug Domain RM11_RS02140 PF13103 TonB C terminal RM11_RS02145 PF01464 Transglycosylase SLT domain RM11_RS02150 PF00701 Dihydrodipicolinate synthetase family RM11_RS02155 PF01668 SmpB protein RM11_RS02160 PF03167 Uracil DNA glycosylase superfamily RM11_RS02165 PF01192 RNA polymerase Rpb6 RM11_RS02170 PF02824 TGS domain RM11_RS02170 PF04607 Region found in RelA / SpoT proteins RM11_RS02170 PF13291 ACT domain RM11_RS02170 PF13328 HD domain RM11_RS02175 PF00156 Phosphoribosyl transferase domain RM11_RS02180 PF09835 RM11_RS02180 RM11_RS02185 PF01648 4'-phosphopantetheinyl transferase superfamily RM11_RS02190 PF00717 Peptidase S24-like RM11_RS02195 PF00035 Double-stranded RNA binding motif RM11_RS02195 PF14622 Ribonuclease-III-like RM11_RS02200 PF01926 50S ribosome-binding GTPase RM11_RS02200 PF07650 KH domain RM11_RS02205 PF02565 Recombination protein O C terminal RM11_RS02205 PF11967 Recombination protein O N terminal RM11_RS02210 PF02569 Pantoate-beta-alanine ligase RM11_RS02215 PF02548 Ketopantoate hydroxymethyltransferase RM11_RS02225 PF01571 Aminomethyltransferase folate-binding domain RM11_RS02225 PF08669 Glycine cleavage T-protein C-terminal barrel domain RM11_RS02235 PF09539 RM11_RS02235 RM11_RS02240 PF01406 tRNA synthetases class I (C) catalytic domain RM11_RS02245 PF04239 Protein of unknown function (DUF421) RM11_RS02250 PF00005 ABC transporter RM11_RS02250 PF00664 ABC transporter transmembrane region RM11_RS02255 PF02666 RM11_RS02255 RM11_RS02260 PF01066 CDP-alcohol phosphatidyltransferase RM11_RS02260 PF08009 RM11_RS02260 RM11_RS02265 PF00106 short chain dehydrogenase RM11_RS02270 PF00156 Phosphoribosyl transferase domain RM11_RS02270 PF13537 Glutamine amidotransferase domain RM11_RS02275 PF02674 RM11_RS02275 RM11_RS02280 PF13481 AAA domain RM11_RS02280 PF13541 Subunit ChlI of Mg-chelatase RM11_RS02285 PF00772 DnaB-like helicase N terminal domain RM11_RS02285 PF03796 DnaB-like helicase C terminal domain RM11_RS02290 PF01281 Ribosomal protein L9, N-terminal domain RM11_RS02290 PF03948 Ribosomal protein L9, C-terminal domain RM11_RS02300 PF01084 Ribosomal protein S18 RM11_RS02305 PF01250 Ribosomal protein S6 RM11_RS02310 PF01569 PAP2 superfamily RM11_RS02315 PF00698 Acyl transferase domain RM11_RS02320 PF13561 Enoyl-(Acyl carrier protein) reductase RM11_RS02325 PF00550 Phosphopantetheine attachment site RM11_RS02330 PF00109 Beta-ketoacyl synthase, N-terminal domain RM11_RS02330 PF02801 Beta-ketoacyl synthase, C-terminal domain RM11_RS02335 PF02618 YceG-like family RM11_RS02340 PF00625 Guanylate kinase RM11_RS02345 PF00398 Ribosomal RNA adenine dimethylase RM11_RS02350 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RM11_RS02355 PF13624 SurA N-terminal domain RM11_RS02360 PF04453 Organic solvent tolerance protein RM11_RS02365 PF03739 RM11_RS02365 RM11_RS02370 PF03739 RM11_RS02370 RM11_RS02380 PF04364 DNA polymerase III chi subunit, HolC RM11_RS02390 PF07690 Major Facilitator Superfamily RM11_RS02400 PF03797 Autotransporter beta-domain RM11_RS02410 PF00334 Nucleoside diphosphate kinase RM11_RS02415 PF01066 CDP-alcohol phosphatidyltransferase RM11_RS02420 PF01541 GIY-YIG catalytic domain RM11_RS02420 PF02151 UvrB/uvrC motif RM11_RS02420 PF08459 UvrC Helix-hairpin-helix N-terminal RM11_RS02420 PF12826 Helix-hairpin-helix motif RM11_RS02425 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ RM11_RS02435 PF02416 mttA/Hcf106 family RM11_RS02445 PF00902 Sec-independent protein translocase protein (TatC) RM11_RS02450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RM11_RS02450 PF02403 Seryl-tRNA synthetase N-terminal domain RM11_RS02455 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RM11_RS02460 PF01476 LysM domain RM11_RS02460 PF01551 Peptidase family M23 RM11_RS02470 PF04430 Protein of unknown function (DUF498/DUF598) RM11_RS02475 PF00494 Squalene/phytoene synthase RM11_RS02480 PF13145 PPIC-type PPIASE domain RM11_RS02480 PF13624 SurA N-terminal domain RM11_RS02485 PF00121 Triosephosphate isomerase RM11_RS02490 PF03840 Preprotein translocase SecG subunit RM11_RS02495 PF00117 Glutamine amidotransferase class-I RM11_RS02495 PF06418 CTP synthase N-terminus RM11_RS02500 PF00793 DAHP synthetase I family RM11_RS02505 PF00113 Enolase, C-terminal TIM barrel domain RM11_RS02505 PF03952 Enolase, N-terminal domain RM11_RS02510 PF05154 RM11_RS02510 RM11_RS02515 PF04977 Septum formation initiator RM11_RS02520 PF00676 Dehydrogenase E1 component RM11_RS02525 PF00364 Biotin-requiring enzyme RM11_RS02525 PF02779 Transketolase, pyrimidine binding domain RM11_RS02525 PF02780 Transketolase, C-terminal domain RM11_RS02530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RM11_RS02530 PF00364 Biotin-requiring enzyme RM11_RS02530 PF02817 e3 binding domain RM11_RS02535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RM11_RS02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM11_RS02540 PF04055 Radical SAM superfamily RM11_RS02545 PF03364 Polyketide cyclase / dehydrase and lipid transport RM11_RS02550 PF02464 Competence-damaged protein RM11_RS02555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RM11_RS02555 PF02542 YgbB family RM11_RS02560 PF02082 Transcriptional regulator RM11_RS02565 PF00512 His Kinase A (phospho-acceptor) domain RM11_RS02565 PF00672 HAMP domain RM11_RS02565 PF00989 PAS fold RM11_RS02565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS02570 PF00072 Response regulator receiver domain RM11_RS02570 PF00158 Sigma-54 interaction domain RM11_RS02570 PF02954 Bacterial regulatory protein, Fis family RM11_RS02575 PF02080 TrkA-C domain RM11_RS02575 PF02254 TrkA-N domain RM11_RS02585 PF00574 Clp protease RM11_RS02590 PF06689 ClpX C4-type zinc finger RM11_RS02590 PF07724 AAA domain (Cdc48 subfamily) RM11_RS02590 PF10431 C-terminal, D2-small domain, of ClpB protein RM11_RS02595 PF00004 ATPase family associated with various cellular activities (AAA) RM11_RS02595 PF02190 ATP-dependent protease La (LON) domain RM11_RS02595 PF05362 Lon protease (S16) C-terminal proteolytic domain RM11_RS02600 PF00216 Bacterial DNA-binding protein RM11_RS02655 PF00072 Response regulator receiver domain RM11_RS02660 PF12146 Putative lysophospholipase RM11_RS02665 PF00011 Hsp20/alpha crystallin family RM11_RS02675 PF01521 Iron-sulphur cluster biosynthesis RM11_RS02685 PF03279 RM11_RS02685 RM11_RS02690 PF00107 Zinc-binding dehydrogenase RM11_RS02690 PF08240 Alcohol dehydrogenase GroES-like domain RM11_RS02695 PF00109 Beta-ketoacyl synthase, N-terminal domain RM11_RS02695 PF02801 Beta-ketoacyl synthase, C-terminal domain RM11_RS02700 PF00109 Beta-ketoacyl synthase, N-terminal domain RM11_RS02705 PF00550 Phosphopantetheine attachment site RM11_RS02710 PF00390 Malic enzyme, N-terminal domain RM11_RS02710 PF01515 Phosphate acetyl/butaryl transferase RM11_RS02710 PF03949 Malic enzyme, NAD binding domain RM11_RS02715 PF01442 Apolipoprotein A1/A4/E domain RM11_RS02725 PF01926 50S ribosome-binding GTPase RM11_RS02725 PF13167 RM11_RS02725 RM11_RS02725 PF16360 RM11_RS02725 RM11_RS02735 PF02628 RM11_RS02735 RM11_RS02740 PF01118 Semialdehyde dehydrogenase, NAD binding domain RM11_RS02745 PF00464 Serine hydroxymethyltransferase RM11_RS02750 PF03477 ATP cone domain RM11_RS02760 PF00677 Lumazine binding domain RM11_RS02765 PF00885 6,7-dimethyl-8-ribityllumazine synthase RM11_RS02770 PF01029 NusB family RM11_RS02775 PF04355 SmpA / OmlA family RM11_RS02780 PF02620 RM11_RS02780 RM11_RS02785 PF02504 Fatty acid synthesis protein RM11_RS02790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RM11_RS02790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RM11_RS02795 PF00216 Bacterial DNA-binding protein RM11_RS02800 PF13411 MerR HTH family regulatory protein RM11_RS02805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RM11_RS02805 PF02824 TGS domain RM11_RS02805 PF03129 Anticodon binding domain RM11_RS02805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RM11_RS02810 PF01809 RM11_RS02810 RM11_RS02815 PF01592 NifU-like N terminal domain RM11_RS02820 PF01227 GTP cyclohydrolase I RM11_RS02830 PF05990 Alpha/beta hydrolase of unknown function (DUF900) RM11_RS02865 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RM11_RS02870 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RM11_RS02875 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RM11_RS02880 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RM11_RS02885 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RM11_RS02890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RM11_RS02890 PF10531 SLBB domain RM11_RS02890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RM11_RS02895 PF00384 Molybdopterin oxidoreductase RM11_RS02895 PF09326 RM11_RS02895 RM11_RS02895 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RM11_RS02895 PF13510 2Fe-2S iron-sulfur cluster binding domain RM11_RS02900 PF00146 NADH dehydrogenase RM11_RS02905 PF12838 4Fe-4S dicluster domain RM11_RS02910 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RM11_RS02915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RM11_RS02920 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RM11_RS02920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RM11_RS02920 PF06455 RM11_RS02920 RM11_RS02925 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RM11_RS02925 PF01059 RM11_RS02925 RM11_RS02930 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RM11_RS02935 PF03099 Biotin/lipoate A/B protein ligase family RM11_RS02940 PF07521 RNA-metabolising metallo-beta-lactamase RM11_RS02940 PF12706 Beta-lactamase superfamily domain RM11_RS02945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RM11_RS02945 PF03129 Anticodon binding domain RM11_RS02950 PF02687 RM11_RS02950 RM11_RS02950 PF12704 MacB-like periplasmic core domain RM11_RS02955 PF00005 ABC transporter RM11_RS02960 PF03937 Flavinator of succinate dehydrogenase RM11_RS02965 PF00270 DEAD/DEAH box helicase RM11_RS02965 PF00271 Helicase conserved C-terminal domain RM11_RS02965 PF02559 CarD-like/TRCF domain RM11_RS02965 PF03461 TRCF domain RM11_RS02975 PF06776 Invasion associated locus B (IalB) protein RM11_RS02980 PF00575 S1 RNA binding domain RM11_RS02980 PF10150 Ribonuclease E/G family RM11_RS02985 PF01520 N-acetylmuramoyl-L-alanine amidase RM11_RS02985 PF11741 AMIN domain RM11_RS02990 PF00905 Penicillin binding protein transpeptidase domain RM11_RS02990 PF00912 Transglycosylase RM11_RS02990 PF17092 RM11_RS02990 RM11_RS02995 PF00472 RF-1 domain RM11_RS02995 PF03462 PCRF domain RM11_RS03000 PF00578 AhpC/TSA family RM11_RS03005 PF00579 tRNA synthetases class I (W and Y) RM11_RS03005 PF01479 S4 domain RM11_RS03010 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RM11_RS03015 PF00266 Aminotransferase class-V RM11_RS03020 PF01458 Uncharacterized protein family (UPF0051) RM11_RS03025 PF00005 ABC transporter RM11_RS03030 PF01458 Uncharacterized protein family (UPF0051) RM11_RS03035 PF00266 Aminotransferase class-V RM11_RS03040 PF01883 Domain of unknown function DUF59 RM11_RS03055 PF01494 FAD binding domain RM11_RS03060 PF01066 CDP-alcohol phosphatidyltransferase RM11_RS03065 PF12706 Beta-lactamase superfamily domain RM11_RS03070 PF01026 TatD related DNase RM11_RS03075 PF09334 tRNA synthetases class I (M) RM11_RS03080 PF13177 DNA polymerase III, delta subunit RM11_RS03085 PF02223 Thymidylate kinase RM11_RS03090 PF00768 D-alanyl-D-alanine carboxypeptidase RM11_RS03090 PF07943 Penicillin-binding protein 5, C-terminal domain RM11_RS03095 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel RM11_RS03105 PF00717 Peptidase S24-like RM11_RS03105 PF01726 LexA DNA binding domain RM11_RS03120 PF00163 Ribosomal protein S4/S9 N-terminal domain RM11_RS03120 PF01479 S4 domain RM11_RS03125 PF01177 Asp/Glu/Hydantoin racemase RM11_RS03130 PF00588 SpoU rRNA Methylase family RM11_RS03135 PF03749 Sugar fermentation stimulation protein RM11_RS03140 PF00557 Metallopeptidase family M24 RM11_RS03145 PF04002 RadC-like JAB domain RM11_RS03150 PF11324 RM11_RS03150 RM11_RS03155 PF00561 alpha/beta hydrolase fold RM11_RS03160 PF02643 Uncharacterized ACR, COG1430 RM11_RS03165 PF00313 'Cold-shock' DNA-binding domain RM11_RS03170 PF13458 Periplasmic binding protein RM11_RS03175 PF02653 RM11_RS03175 RM11_RS03180 PF02653 RM11_RS03180 RM11_RS03185 PF00005 ABC transporter RM11_RS03185 PF12399 Branched-chain amino acid ATP-binding cassette transporter RM11_RS03190 PF00005 ABC transporter RM11_RS03195 PF01425 Amidase RM11_RS03200 PF02686 Glu-tRNAGln amidotransferase C subunit RM11_RS03205 PF03652 Uncharacterised protein family (UPF0081) RM11_RS03210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RM11_RS03215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RM11_RS03215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RM11_RS03220 PF01979 Amidohydrolase family RM11_RS03225 PF02660 RM11_RS03225 RM11_RS03230 PF02481 DNA recombination-mediator protein A RM11_RS03240 PF00575 S1 RNA binding domain RM11_RS03240 PF00773 RNB domain RM11_RS03245 PF00471 Ribosomal protein L33 RM11_RS03250 PF00565 Staphylococcal nuclease homologue RM11_RS03255 PF03167 Uracil DNA glycosylase superfamily RM11_RS03260 PF01037 AsnC family RM11_RS03270 PF01207 Dihydrouridine synthase (Dus) RM11_RS03285 PF00364 Biotin-requiring enzyme RM11_RS03290 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RM11_RS03290 PF02785 Biotin carboxylase C-terminal domain RM11_RS03290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RM11_RS03310 PF04011 LemA family RM11_RS03315 PF04536 TLP18 RM11_RS03320 PF03099 Biotin/lipoate A/B protein ligase family RM11_RS03325 PF00204 DNA gyrase B RM11_RS03325 PF00986 DNA gyrase B subunit, carboxyl terminus RM11_RS03325 PF01751 Toprim domain RM11_RS03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS03330 PF01368 DHH family RM11_RS03330 PF02272 DHHA1 domain RM11_RS03335 PF00572 Ribosomal protein L13 RM11_RS03340 PF00380 Ribosomal protein S9/S16 RM11_RS03345 PF00072 Response regulator receiver domain RM11_RS03365 PF00324 Amino acid permease RM11_RS03375 PF00221 Aromatic amino acid lyase RM11_RS03385 PF01513 ATP-NAD kinase RM11_RS03390 PF00270 DEAD/DEAH box helicase RM11_RS03390 PF00271 Helicase conserved C-terminal domain RM11_RS03395 PF00749 tRNA synthetases class I (E and Q), catalytic domain RM11_RS03400 PF00795 Carbon-nitrogen hydrolase RM11_RS03400 PF02540 NAD synthase RM11_RS03405 PF01474 Class-II DAHP synthetase family RM11_RS03410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RM11_RS03410 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM11_RS03415 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) RM11_RS03420 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RM11_RS03425 PF03772 RM11_RS03425 RM11_RS03425 PF13567 RM11_RS03425 RM11_RS03430 PF00749 tRNA synthetases class I (E and Q), catalytic domain RM11_RS03435 PF00285 Citrate synthase RM11_RS03440 PF00497 Bacterial extracellular solute-binding proteins, family 3 RM11_RS03445 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS03450 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS03455 PF00005 ABC transporter RM11_RS03460 PF02684 RM11_RS03460 RM11_RS03465 PF06230 Protein of unknown function (DUF1009) RM11_RS03470 PF00132 Bacterial transferase hexapeptide (six repeats) RM11_RS03470 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RM11_RS03475 PF07977 FabA-like domain RM11_RS03480 PF00132 Bacterial transferase hexapeptide (six repeats) RM11_RS03480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RM11_RS03485 PF01103 Surface antigen RM11_RS03485 PF07244 Surface antigen variable number repeat RM11_RS03490 PF02163 Peptidase family M50 RM11_RS03495 PF01148 Cytidylyltransferase family RM11_RS03500 PF01765 Ribosome recycling factor RM11_RS03505 PF00696 Amino acid kinase family RM11_RS03510 PF00889 Elongation factor TS RM11_RS03515 PF00318 Ribosomal protein S2 RM11_RS03520 PF08904 RM11_RS03520 RM11_RS03525 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease RM11_RS03530 PF01230 HIT domain RM11_RS03535 PF00004 ATPase family associated with various cellular activities (AAA) RM11_RS03535 PF02861 Clp amino terminal domain RM11_RS03535 PF07724 AAA domain (Cdc48 subfamily) RM11_RS03535 PF10431 C-terminal, D2-small domain, of ClpB protein RM11_RS03540 PF02617 ATP-dependent Clp protease adaptor protein ClpS RM11_RS03545 PF00768 D-alanyl-D-alanine carboxypeptidase RM11_RS03545 PF05036 Sporulation related domain RM11_RS03555 PF03313 RM11_RS03555 RM11_RS03555 PF03315 Serine dehydratase beta chain RM11_RS03560 PF00881 Nitroreductase family RM11_RS03565 PF00623 RNA polymerase Rpb1, domain 2 RM11_RS03565 PF04983 RNA polymerase Rpb1, domain 3 RM11_RS03565 PF04997 RNA polymerase Rpb1, domain 1 RM11_RS03565 PF04998 RNA polymerase Rpb1, domain 5 RM11_RS03565 PF05000 RNA polymerase Rpb1, domain 4 RM11_RS03570 PF00562 RNA polymerase Rpb2, domain 6 RM11_RS03570 PF04560 RNA polymerase Rpb2, domain 7 RM11_RS03570 PF04561 RNA polymerase Rpb2, domain 2 RM11_RS03570 PF04563 RNA polymerase beta subunit RM11_RS03570 PF04565 RNA polymerase Rpb2, domain 3 RM11_RS03570 PF10385 RNA polymerase beta subunit external 1 domain RM11_RS03575 PF00542 Ribosomal protein L7/L12 C-terminal domain RM11_RS03575 PF16320 RM11_RS03575 RM11_RS03580 PF00466 Ribosomal protein L10 RM11_RS03585 PF00687 Ribosomal protein L1p/L10e family RM11_RS03590 PF00298 Ribosomal protein L11, RNA binding domain RM11_RS03590 PF03946 Ribosomal protein L11, N-terminal domain RM11_RS03595 PF02357 Transcription termination factor nusG RM11_RS03600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RM11_RS03610 PF00009 Elongation factor Tu GTP binding domain RM11_RS03610 PF03143 Elongation factor Tu C-terminal domain RM11_RS03610 PF03144 Elongation factor Tu domain 2 RM11_RS03625 PF00588 SpoU rRNA Methylase family RM11_RS03625 PF08032 RNA 2'-O ribose methyltransferase substrate binding RM11_RS03630 PF01694 Rhomboid family RM11_RS03640 PF05071 RM11_RS03640 RM11_RS03645 PF02637 GatB domain RM11_RS03645 PF02934 GatB/GatE catalytic domain RM11_RS03650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RM11_RS03650 PF05697 Bacterial trigger factor protein (TF) RM11_RS03650 PF05698 Bacterial trigger factor protein (TF) C-terminus RM11_RS03680 PF04800 ETC complex I subunit conserved region RM11_RS03695 PF01594 RM11_RS03695 RM11_RS03700 PF00586 AIR synthase related protein, N-terminal domain RM11_RS03700 PF02769 AIR synthase related protein, C-terminal domain RM11_RS03705 PF00551 Formyl transferase RM11_RS03710 PF00072 Response regulator receiver domain RM11_RS03710 PF00512 His Kinase A (phospho-acceptor) domain RM11_RS03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS03710 PF13188 PAS domain RM11_RS03720 PF01258 Prokaryotic dksA/traR C4-type zinc finger RM11_RS03725 PF01613 Flavin reductase like domain RM11_RS03735 PF00206 Lyase RM11_RS03735 PF10397 Adenylosuccinate lyase C-terminus RM11_RS03740 PF06821 Serine hydrolase RM11_RS03745 PF01259 SAICAR synthetase RM11_RS03750 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RM11_RS03755 PF13507 CobB/CobQ-like glutamine amidotransferase domain RM11_RS03760 PF00586 AIR synthase related protein, N-terminal domain RM11_RS03760 PF02769 AIR synthase related protein, C-terminal domain RM11_RS03765 PF01722 BolA-like protein RM11_RS03770 PF00462 Glutaredoxin RM11_RS03775 PF07690 Major Facilitator Superfamily RM11_RS03780 PF00521 DNA gyrase/topoisomerase IV, subunit A RM11_RS03780 PF03989 DNA gyrase C-terminal domain, beta-propeller RM11_RS03785 PF00152 tRNA synthetases class II (D, K and N) RM11_RS03785 PF01336 OB-fold nucleic acid binding domain RM11_RS03785 PF02938 GAD domain RM11_RS03790 PF00570 HRDC domain RM11_RS03790 PF01612 3'-5' exonuclease RM11_RS03795 PF02541 Ppx/GppA phosphatase family RM11_RS03800 PF02503 Polyphosphate kinase middle domain RM11_RS03800 PF13089 Polyphosphate kinase N-terminal domain RM11_RS03800 PF13090 Polyphosphate kinase C-terminal domain RM11_RS03805 PF10276 Zinc-finger domain RM11_RS03810 PF01494 FAD binding domain RM11_RS03815 PF02811 PHP domain RM11_RS03815 PF07733 Bacterial DNA polymerase III alpha subunit RM11_RS03815 PF14579 Helix-hairpin-helix motif RM11_RS03820 PF00270 DEAD/DEAH box helicase RM11_RS03820 PF00271 Helicase conserved C-terminal domain RM11_RS03820 PF17191 RM11_RS03820 RM11_RS03825 PF01380 SIS domain RM11_RS03825 PF13522 Glutamine amidotransferase domain RM11_RS03830 PF00132 Bacterial transferase hexapeptide (six repeats) RM11_RS03830 PF12804 MobA-like NTP transferase domain RM11_RS03835 PF02683 RM11_RS03835 RM11_RS03845 PF01521 Iron-sulphur cluster biosynthesis RM11_RS03850 PF01966 HD domain RM11_RS03850 PF13286 Phosphohydrolase-associated domain RM11_RS03855 PF00750 tRNA synthetases class I (R) RM11_RS03855 PF03485 Arginyl tRNA synthetase N terminal domain RM11_RS03855 PF05746 DALR anticodon binding domain RM11_RS03870 PF01063 Aminotransferase class IV RM11_RS03875 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RM11_RS03895 PF00180 Isocitrate/isopropylmalate dehydrogenase RM11_RS03900 PF07690 Major Facilitator Superfamily RM11_RS03920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RM11_RS03925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RM11_RS03930 PF01467 Cytidylyltransferase RM11_RS03935 PF00521 DNA gyrase/topoisomerase IV, subunit A RM11_RS03935 PF03989 DNA gyrase C-terminal domain, beta-propeller RM11_RS03940 PF00436 Single-strand binding protein family RM11_RS03945 PF00005 ABC transporter RM11_RS03950 PF00543 Nitrogen regulatory protein P-II RM11_RS03955 PF00120 Glutamine synthetase, catalytic domain RM11_RS03955 PF03951 Glutamine synthetase, beta-Grasp domain RM11_RS03965 PF07542 ATP12 chaperone protein RM11_RS03970 PF00849 RNA pseudouridylate synthase RM11_RS03975 PF00005 ABC transporter RM11_RS03975 PF00664 ABC transporter transmembrane region RM11_RS03980 PF01411 tRNA synthetases class II (A) RM11_RS03980 PF02272 DHHA1 domain RM11_RS03980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RM11_RS03985 PF00154 recA bacterial DNA recombination protein RM11_RS03990 PF00004 ATPase family associated with various cellular activities (AAA) RM11_RS03990 PF12002 MgsA AAA+ ATPase C terminal RM11_RS03990 PF16193 RM11_RS03990 RM11_RS03995 PF13180 PDZ domain RM11_RS03995 PF13365 Trypsin-like peptidase domain RM11_RS04000 PF01196 Ribosomal protein L17 RM11_RS04005 PF01000 RNA polymerase Rpb3/RpoA insert domain RM11_RS04005 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RM11_RS04005 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RM11_RS04010 PF00411 Ribosomal protein S11 RM11_RS04015 PF00416 Ribosomal protein S13/S18 RM11_RS04020 PF00406 Adenylate kinase RM11_RS04025 PF00344 SecY translocase RM11_RS04030 PF00828 Ribosomal protein L18e/L15 RM11_RS04035 PF00327 Ribosomal protein L30p/L7e RM11_RS04040 PF00333 Ribosomal protein S5, N-terminal domain RM11_RS04040 PF03719 Ribosomal protein S5, C-terminal domain RM11_RS04045 PF00861 Ribosomal L18p/L5e family RM11_RS04050 PF00347 Ribosomal protein L6 RM11_RS04055 PF00410 Ribosomal protein S8 RM11_RS04060 PF00253 Ribosomal protein S14p/S29e RM11_RS04065 PF00281 Ribosomal protein L5 RM11_RS04065 PF00673 ribosomal L5P family C-terminus RM11_RS04070 PF00467 KOW motif RM11_RS04070 PF17136 RM11_RS04070 RM11_RS04075 PF00238 Ribosomal protein L14p/L23e RM11_RS04080 PF00366 Ribosomal protein S17 RM11_RS04085 PF00831 Ribosomal L29 protein RM11_RS04090 PF00252 Ribosomal protein L16p/L10e RM11_RS04095 PF00189 Ribosomal protein S3, C-terminal domain RM11_RS04095 PF07650 KH domain RM11_RS04100 PF00237 Ribosomal protein L22p/L17e RM11_RS04105 PF00203 Ribosomal protein S19 RM11_RS04110 PF00181 Ribosomal Proteins L2, RNA binding domain RM11_RS04110 PF03947 Ribosomal Proteins L2, C-terminal domain RM11_RS04115 PF00276 Ribosomal protein L23 RM11_RS04120 PF00573 Ribosomal protein L4/L1 family RM11_RS04125 PF00297 Ribosomal protein L3 RM11_RS04130 PF00338 Ribosomal protein S10p/S20e RM11_RS04140 PF00009 Elongation factor Tu GTP binding domain RM11_RS04140 PF00679 Elongation factor G C-terminus RM11_RS04140 PF03144 Elongation factor Tu domain 2 RM11_RS04140 PF03764 Elongation factor G, domain IV RM11_RS04140 PF14492 Elongation Factor G, domain II RM11_RS04145 PF00177 Ribosomal protein S7p/S5e RM11_RS04150 PF00164 Ribosomal protein S12/S23 RM11_RS04155 PF03372 Endonuclease/Exonuclease/phosphatase family RM11_RS04160 PF00497 Bacterial extracellular solute-binding proteins, family 3 RM11_RS04165 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS04170 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS04175 PF00005 ABC transporter RM11_RS04180 PF00133 tRNA synthetases class I (I, L, M and V) RM11_RS04180 PF08264 Anticodon-binding domain of tRNA RM11_RS04180 PF10458 Valyl tRNA synthetase tRNA binding arm RM11_RS04185 PF10691 RM11_RS04185 RM11_RS04190 PF02321 Outer membrane efflux protein RM11_RS04195 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RM11_RS04220 PF13505 Outer membrane protein beta-barrel domain RM11_RS04230 PF00924 Mechanosensitive ion channel RM11_RS04240 PF02355 Protein export membrane protein RM11_RS04240 PF07549 SecD/SecF GG Motif RM11_RS04245 PF00999 Sodium/hydrogen exchanger family RM11_RS04245 PF02254 TrkA-N domain RM11_RS04250 PF03706 RM11_RS04250 RM11_RS04260 PF00571 CBS domain RM11_RS04260 PF03471 Transporter associated domain RM11_RS04260 PF03741 RM11_RS04260 RM11_RS04270 PF00324 Amino acid permease RM11_RS04275 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RM11_RS04275 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain RM11_RS04280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RM11_RS04285 PF13538 UvrD-like helicase C-terminal domain RM11_RS04285 PF13604 AAA domain RM11_RS04295 PF01715 IPP transferase RM11_RS04300 PF13180 PDZ domain RM11_RS04300 PF13365 Trypsin-like peptidase domain RM11_RS04305 PF01145 SPFH domain / Band 7 family RM11_RS04310 PF01145 SPFH domain / Band 7 family RM11_RS04315 PF00186 Dihydrofolate reductase RM11_RS04320 PF00303 Thymidylate synthase RM11_RS04325 PF00083 Sugar (and other) transporter RM11_RS04335 PF11015 Protein of unknown function (DUF2853) RM11_RS04340 PF04386 Stringent starvation protein B RM11_RS04355 PF00580 UvrD/REP helicase N-terminal domain RM11_RS04355 PF13361 UvrD-like helicase C-terminal domain RM11_RS04360 PF02630 SCO1/SenC RM11_RS04365 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RM11_RS04370 PF00557 Metallopeptidase family M24 RM11_RS04370 PF01321 Creatinase/Prolidase N-terminal domain RM11_RS04370 PF16188 RM11_RS04370 RM11_RS04370 PF16189 RM11_RS04370 RM11_RS04375 PF00533 BRCA1 C Terminus (BRCT) domain RM11_RS04375 PF01653 NAD-dependent DNA ligase adenylation domain RM11_RS04375 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RM11_RS04375 PF03120 NAD-dependent DNA ligase OB-fold domain RM11_RS04375 PF12826 Helix-hairpin-helix motif RM11_RS04380 PF02463 RecF/RecN/SMC N terminal domain RM11_RS04385 PF13525 Outer membrane lipoprotein RM11_RS04390 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RM11_RS04395 PF00091 Tubulin/FtsZ family, GTPase domain RM11_RS04395 PF12327 FtsZ family, C-terminal domain RM11_RS04400 PF02491 SHS2 domain inserted in FTSA RM11_RS04400 PF14450 Cell division protein FtsA RM11_RS04405 PF03799 Cell division protein FtsQ RM11_RS04405 PF08478 POTRA domain, FtsQ-type RM11_RS04410 PF01820 D-ala D-ala ligase N-terminus RM11_RS04410 PF07478 D-ala D-ala ligase C-terminus RM11_RS04415 PF01565 FAD binding domain RM11_RS04415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RM11_RS04420 PF01225 Mur ligase family, catalytic domain RM11_RS04420 PF02875 Mur ligase family, glutamate ligase domain RM11_RS04420 PF08245 Mur ligase middle domain RM11_RS04425 PF03033 Glycosyltransferase family 28 N-terminal domain RM11_RS04425 PF04101 Glycosyltransferase family 28 C-terminal domain RM11_RS04430 PF01098 RM11_RS04430 RM11_RS04435 PF08245 Mur ligase middle domain RM11_RS04440 PF00953 Glycosyl transferase family 4 RM11_RS04440 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RM11_RS04445 PF01225 Mur ligase family, catalytic domain RM11_RS04445 PF02875 Mur ligase family, glutamate ligase domain RM11_RS04445 PF08245 Mur ligase middle domain RM11_RS04450 PF01225 Mur ligase family, catalytic domain RM11_RS04450 PF02875 Mur ligase family, glutamate ligase domain RM11_RS04450 PF08245 Mur ligase middle domain RM11_RS04455 PF00905 Penicillin binding protein transpeptidase domain RM11_RS04455 PF03717 Penicillin-binding Protein dimerisation domain RM11_RS04465 PF01795 MraW methylase family RM11_RS04470 PF01464 Transglycosylase SLT domain RM11_RS04490 PF00005 ABC transporter RM11_RS04490 PF12848 ABC transporter RM11_RS04500 PF00857 Isochorismatase family RM11_RS04505 PF04332 RM11_RS04505 RM11_RS04510 PF01381 Helix-turn-helix RM11_RS04535 PF01381 Helix-turn-helix RM11_RS04555 PF00140 Sigma-70 factor, region 1 RM11_RS04555 PF03979 Sigma-70 factor, region 1 RM11_RS04555 PF04539 Sigma-70 region 3 RM11_RS04555 PF04542 Sigma-70 region 2 RM11_RS04555 PF04545 Sigma-70, region 4 RM11_RS04555 PF04546 Sigma-70, non-essential region RM11_RS04560 PF01807 CHC2 zinc finger RM11_RS04560 PF08275 DNA primase catalytic core, N-terminal domain RM11_RS04560 PF13662 Toprim domain RM11_RS04565 PF00924 Mechanosensitive ion channel RM11_RS04575 PF04226 RM11_RS04575 RM11_RS04580 PF04345 Chorismate lyase RM11_RS04585 PF00117 Glutamine amidotransferase class-I RM11_RS04585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RM11_RS04590 PF07690 Major Facilitator Superfamily RM11_RS04595 PF02142 MGS-like domain RM11_RS04595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RM11_RS04595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RM11_RS04600 PF00313 'Cold-shock' DNA-binding domain RM11_RS04605 PF00155 Aminotransferase class I and II RM11_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RM11_RS04610 PF03466 LysR substrate binding domain RM11_RS04615 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM11_RS04620 PF02386 Cation transport protein RM11_RS04625 PF00534 Glycosyl transferases group 1 RM11_RS04630 PF01272 Transcription elongation factor, GreA/GreB, C-term RM11_RS04630 PF03449 Transcription elongation factor, N-terminal RM11_RS04635 PF08239 Bacterial SH3 domain RM11_RS04640 PF00271 Helicase conserved C-terminal domain RM11_RS04640 PF02151 UvrB/uvrC motif RM11_RS04640 PF04851 Type III restriction enzyme, res subunit RM11_RS04640 PF12344 Ultra-violet resistance protein B RM11_RS04650 PF00588 SpoU rRNA Methylase family RM11_RS04655 PF01743 Poly A polymerase head domain RM11_RS04655 PF12627 Probable RNA and SrmB- binding site of polymerase A RM11_RS04660 PF07726 ATPase family associated with various cellular activities (AAA) RM11_RS04665 PF01882 RM11_RS04665 RM11_RS04670 PF07584 RM11_RS04670 RM11_RS04670 PF13709 Domain of unknown function (DUF4159) RM11_RS04675 PF07090 Protein of unknown function (DUF1355) RM11_RS04680 PF00149 Calcineurin-like phosphoesterase RM11_RS04685 PF01545 Cation efflux family RM11_RS04685 PF16916 RM11_RS04685 RM11_RS04695 PF03054 tRNA methyl transferase RM11_RS04700 PF06627 Protein of unknown function (DUF1153) RM11_RS04710 PF00072 Response regulator receiver domain RM11_RS04710 PF00486 Transcriptional regulatory protein, C terminal RM11_RS04715 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) RM11_RS04720 PF06577 RM11_RS04720 RM11_RS04730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RM11_RS04735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RM11_RS04745 PF00005 ABC transporter RM11_RS04750 PF00005 ABC transporter RM11_RS04755 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS04755 PF12911 RM11_RS04755 RM11_RS04760 PF00528 Binding-protein-dependent transport system inner membrane component RM11_RS04765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RM11_RS04770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RM11_RS04775 PF03352 Methyladenine glycosylase RM11_RS04780 PF02601 RM11_RS04780 RM11_RS04780 PF13742 RM11_RS04780 RM11_RS04785 PF09608 RM11_RS04785 RM11_RS04790 PF01925 RM11_RS04790 RM11_RS04800 PF01012 Electron transfer flavoprotein domain RM11_RS04805 PF00766 Electron transfer flavoprotein FAD-binding domain RM11_RS04805 PF01012 Electron transfer flavoprotein domain RM11_RS04810 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase RM11_RS04810 PF13450 NAD(P)-binding Rossmann-like domain RM11_RS04815 PF03807 NADP oxidoreductase coenzyme F420-dependent RM11_RS04815 PF14748 Pyrroline-5-carboxylate reductase dimerisation RM11_RS04825 PF02021 Uncharacterised protein family UPF0102 RM11_RS04830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RM11_RS04835 PF01883 Domain of unknown function DUF59 RM11_RS04835 PF10609 ParA/MinD ATPase like RM11_RS04840 PF00468 Ribosomal protein L34 RM11_RS04845 PF00825 Ribonuclease P RM11_RS04850 PF02096 60Kd inner membrane protein RM11_RS04850 PF14849 YidC periplasmic domain RM11_RS04855 PF01926 50S ribosome-binding GTPase RM11_RS04860 PF13417 Glutathione S-transferase, N-terminal domain RM11_RS04860 PF14497 Glutathione S-transferase, C-terminal domain RM11_RS04865 PF01113 Dihydrodipicolinate reductase, N-terminus RM11_RS04865 PF05173 Dihydrodipicolinate reductase, C-terminus RM11_RS04870 PF00300 Histidine phosphatase superfamily (branch 1) RM11_RS04890 PF02530 RM11_RS04890 RM11_RS04895 PF01510 N-acetylmuramoyl-L-alanine amidase RM11_RS04900 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RM11_RS04950 PF01475 Ferric uptake regulator family RM11_RS04955 PF00529 HlyD family secretion protein RM11_RS04955 PF16576 RM11_RS04955 RM11_RS04960 PF07690 Major Facilitator Superfamily RM11_RS04965 PF00583 Acetyltransferase (GNAT) family RM11_RS04970 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RM11_RS04970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RM11_RS04980 PF00581 Rhodanese-like domain RM11_RS04990 PF00175 Oxidoreductase NAD-binding domain RM11_RS04990 PF00970 Oxidoreductase FAD-binding domain RM11_RS04995 PF00842 Alanine racemase, C-terminal domain RM11_RS04995 PF01168 Alanine racemase, N-terminal domain RM11_RS05005 PF02347 Glycine cleavage system P-protein RM11_RS05010 PF01597 Glycine cleavage H-protein RM11_RS05015 PF01571 Aminomethyltransferase folate-binding domain RM11_RS05015 PF08669 Glycine cleavage T-protein C-terminal barrel domain RM11_RS05020 PF02190 ATP-dependent protease La (LON) domain RM11_RS05025 PF03966 Trm112p-like protein RM11_RS05035 PF01118 Semialdehyde dehydrogenase, NAD binding domain RM11_RS05035 PF02774 Semialdehyde dehydrogenase, dimerisation domain RM11_RS05040 PF08239 Bacterial SH3 domain RM11_RS05060 PF01575 MaoC like domain RM11_RS05065 PF03447 Homoserine dehydrogenase, NAD binding domain RM11_RS05080 PF02633 Creatinine amidohydrolase RM11_RS05100 PF01497 Periplasmic binding protein RM11_RS05105 PF01032 FecCD transport family RM11_RS05110 PF01032 FecCD transport family RM11_RS05115 PF00005 ABC transporter RM11_RS05125 PF00149 Calcineurin-like phosphoesterase RM11_RS05130 PF03797 Autotransporter beta-domain RM11_RS05145 PF03797 Autotransporter beta-domain RM11_RS05165 PF04273 Putative phosphatase (DUF442) RM11_RS05170 PF01687 Riboflavin kinase RM11_RS05170 PF06574 FAD synthetase RM11_RS05175 PF13242 HAD-hyrolase-like RM11_RS05175 PF13344 Haloacid dehalogenase-like hydrolase RM11_RS05195 PF04956 RM11_RS05195 RM11_RS05200 PF05101 RM11_RS05200 RM11_RS05205 PF03135 RM11_RS05205 RM11_RS05215 PF04610 RM11_RS05215 RM11_RS05225 PF04335 VirB8 protein RM11_RS05230 PF03524 Conjugal transfer protein RM11_RS05235 PF03743 Bacterial conjugation TrbI-like protein RM11_RS05240 PF00437 Type II/IV secretion system protein RM11_RS05255 PF02534 Type IV secretory system Conjugative DNA transfer RM11_RS05265 PF02661 Fic/DOC family RM11_RS05290 PF03023 RM11_RS05290 RM11_RS05295 PF00579 tRNA synthetases class I (W and Y) RM11_RS05300 PF00582 Universal stress protein family RM11_RS05305 PF01106 NifU-like domain RM11_RS05305 PF08712 Scaffold protein Nfu/NifU N terminal RM11_RS05310 PF00118 TCP-1/cpn60 chaperonin family RM11_RS05315 PF00166 Chaperonin 10 Kd subunit RM11_RS05320 PF00206 Lyase RM11_RS05320 PF10415 Fumarase C C-terminus RM11_RS05325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RM11_RS05325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RM11_RS05325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RM11_RS05325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RM11_RS05330 PF08534 Redoxin RM11_RS05335 PF03129 Anticodon binding domain RM11_RS05335 PF13393 Histidyl-tRNA synthetase RM11_RS05340 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RM11_RS05390 PF01551 Peptidase family M23 RM11_RS05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RM11_RS05400 PF07568 RM11_RS05400 RM11_RS05420 PF00072 Response regulator receiver domain RM11_RS05420 PF08281 Sigma-70, region 4 RM11_RS05425 PF07536 RM11_RS05425 RM11_RS05430 PF13763 RM11_RS05430 RM11_RS05440 PF04216 Protein involved in formate dehydrogenase formation RM11_RS05475 PF07484 Phage Tail Collar Domain RM11_RS05500 PF13252 RM11_RS05500 RM11_RS05510 PF16510 RM11_RS05510 RM11_RS05515 PF04466 Phage terminase large subunit RM11_RS05535 PF00004 ATPase family associated with various cellular activities (AAA) RM11_RS05535 PF02861 Clp amino terminal domain RM11_RS05535 PF07724 AAA domain (Cdc48 subfamily) RM11_RS05535 PF10431 C-terminal, D2-small domain, of ClpB protein RM11_RS05545 PF03884 Domain of unknown function (DUF329) RM11_RS05550 PF02545 Maf-like protein RM11_RS05555 PF01176 Translation initiation factor 1A / IF-1 RM11_RS05570 PF02600 Disulfide bond formation protein DsbB RM11_RS05580 PF02600 Disulfide bond formation protein DsbB RM11_RS05605 PF00731 AIR carboxylase RM11_RS05610 PF02222 ATP-grasp domain RM11_RS05615 PF00444 Ribosomal protein L36 RM11_RS05630 PF01812 5-formyltetrahydrofolate cyclo-ligase family RM11_RS05635 PF13277 YmdB-like protein RM11_RS05650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RM11_RS05655 PF09588 YqaJ-like viral recombinase domain RM11_RS05680 PF07120 RM11_RS05680 RM11_RS05695 PF13155 Toprim-like RM11_RS05695 PF13481 AAA domain RM11_RS05735 PF03421 RM11_RS05735 RM11_RS05740 PF00959 Phage lysozyme RM11_RS05775 PF02600 Disulfide bond formation protein DsbB RM11_RS05795 PF00692 dUTPase RM11_RS05805 PF02472 Biopolymer transport protein ExbD/TolR RM11_RS05810 PF01618 RM11_RS05810 RM11_RS05815 PF05957 RM11_RS05815 RM11_RS05825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RM11_RS05825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RM11_RS05825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RM11_RS05825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RM11_RS05830 PF00004 ATPase family associated with various cellular activities (AAA) RM11_RS05830 PF01434 Peptidase family M41 RM11_RS05830 PF06480 FtsH Extracellular RM11_RS05835 PF01171 PP-loop family RM11_RS05855 PF00691 OmpA family RM11_RS05860 PF06242 RM11_RS05860 RM11_RS05865 PF01709 Transcriptional regulator RM11_RS05875 PF04052 TolB amino-terminal domain RM11_RS05875 PF07676 WD40-like Beta Propeller Repeat RM11_RS05885 PF02472 Biopolymer transport protein ExbD/TolR RM11_RS05890 PF01618 RM11_RS05890 RM11_RS05895 PF03061 Thioesterase superfamily RM11_RS05900 PF05491 Holliday junction DNA helicase ruvB C-terminus RM11_RS05900 PF05496 Holliday junction DNA helicase ruvB N-terminus RM11_RS05905 PF01330 RuvA N terminal domain RM11_RS05905 PF07499 RuvA, C-terminal domain RM11_RS05905 PF14520 Helix-hairpin-helix domain RM11_RS05910 PF02075 Crossover junction endodeoxyribonuclease RuvC RM11_RS05915 PF07323 Protein of unknown function (DUF1465) RM11_RS05920 PF10129 RM11_RS05920 RM11_RS05925 PF02581 Thiamine monophosphate synthase/TENI RM11_RS05940 PF08238 Sel1 repeat RM11_RS05945 PF01132 Elongation factor P (EF-P) OB domain RM11_RS05945 PF08207 Elongation factor P (EF-P) KOW-like domain RM11_RS05945 PF09285 Elongation factor P, C-terminal RM11_RS05950 PF00459 Inositol monophosphatase family RM11_RS05955 PF00005 ABC transporter RM11_RS05955 PF00664 ABC transporter transmembrane region RM11_RS05960 PF01197 Ribosomal protein L31 RM11_RS05965 PF00274 Fructose-bisphosphate aldolase class-I RM11_RS05970 PF00162 Phosphoglycerate kinase RM11_RS05975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RM11_RS05975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RM11_RS05980 PF00456 Transketolase, thiamine diphosphate binding domain RM11_RS05980 PF02779 Transketolase, pyrimidine binding domain RM11_RS05980 PF02780 Transketolase, C-terminal domain RM11_RS05985 PF13747 RM11_RS05985 RM11_RS05990 PF05164 Cell division protein ZapA RM11_RS06000 PF00224 Pyruvate kinase, barrel domain RM11_RS06000 PF02887 Pyruvate kinase, alpha/beta domain RM11_RS06005 PF06282 RM11_RS06005 RM11_RS06010 PF10073 RM11_RS06010 RM11_RS06015 PF00005 ABC transporter RM11_RS06015 PF16326 RM11_RS06015 RM11_RS06025 PF04263 Thiamin pyrophosphokinase, catalytic domain RM11_RS06025 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain RM11_RS06030 PF01435 Peptidase family M48 RM11_RS06035 PF04542 Sigma-70 region 2 RM11_RS06035 PF04545 Sigma-70, region 4 RM11_RS06045 PF00037 4Fe-4S binding domain RM11_RS06045 PF11953 Domain of unknown function (DUF3470) RM11_RS06050 PF02559 CarD-like/TRCF domain RM11_RS06055 PF01783 Ribosomal L32p protein family RM11_RS06060 PF00348 Polyprenyl synthetase RM11_RS06065 PF04551 GcpE protein RM11_RS06075 PF13533 Biotin-lipoyl like RM11_RS06075 PF16576 RM11_RS06075 RM11_RS06085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RM11_RS06090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RM11_RS06090 PF02874 ATP synthase alpha/beta family, beta-barrel domain RM11_RS06095 PF00231 ATP synthase RM11_RS06100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RM11_RS06100 PF00306 ATP synthase alpha/beta chain, C terminal domain RM11_RS06100 PF02874 ATP synthase alpha/beta family, beta-barrel domain RM11_RS06105 PF00213 ATP synthase delta (OSCP) subunit RM11_RS06110 PF00270 DEAD/DEAH box helicase RM11_RS06115 PF00923 Transaldolase RM11_RS06120 PF04390 Lipopolysaccharide-assembly RM11_RS06125 PF00133 tRNA synthetases class I (I, L, M and V) RM11_RS06125 PF08264 Anticodon-binding domain of tRNA RM11_RS06125 PF13603 Leucyl-tRNA synthetase, Domain 2 RM11_RS06130 PF01168 Alanine racemase, N-terminal domain RM11_RS06140 PF00501 AMP-binding enzyme RM11_RS06140 PF13193 AMP-binding enzyme C-terminal domain RM11_RS06140 PF16177 RM11_RS06140 RM11_RS06150 PF00005 ABC transporter RM11_RS06160 PF02698 DUF218 domain RM11_RS06170 PF00005 ABC transporter RM11_RS06170 PF02687 RM11_RS06170 RM11_RS06170 PF12704 MacB-like periplasmic core domain RM11_RS06175 PF16576 RM11_RS06175 RM11_RS06180 PF02321 Outer membrane efflux protein RM11_RS06185 PF03372 Endonuclease/Exonuclease/phosphatase family RM11_RS06190 PF03548 Outer membrane lipoprotein carrier protein LolA RM11_RS06195 PF01580 FtsK/SpoIIIE family RM11_RS06195 PF09397 Ftsk gamma domain RM11_RS06195 PF13491 RM11_RS06195 RM11_RS06200 PF01494 FAD binding domain RM11_RS06205 PF00816 H-NS histone family RM11_RS06225 PF04956 RM11_RS06225 RM11_RS06230 PF04956 RM11_RS06230 RM11_RS06235 PF04956 RM11_RS06235 RM11_RS06240 PF04956 RM11_RS06240 RM11_RS06245 PF04956 RM11_RS06245 RM11_RS06250 PF04956 RM11_RS06250 RM11_RS06255 PF04956 RM11_RS06255 RM11_RS06265 PF05101 RM11_RS06265 RM11_RS06270 PF03135 RM11_RS06270 RM11_RS06275 PF07996 Type IV secretion system proteins RM11_RS06280 PF04610 RM11_RS06280 RM11_RS06290 PF07996 Type IV secretion system proteins RM11_RS06295 PF04610 RM11_RS06295 RM11_RS06305 PF04335 VirB8 protein RM11_RS06310 PF03524 Conjugal transfer protein RM11_RS06315 PF03743 Bacterial conjugation TrbI-like protein RM11_RS06320 PF00437 Type II/IV secretion system protein RM11_RS06335 PF13085 2Fe-2S iron-sulfur cluster binding domain RM11_RS06335 PF13534 4Fe-4S dicluster domain RM11_RS06340 PF00890 FAD binding domain RM11_RS06340 PF02910 Fumarate reductase flavoprotein C-term RM11_RS06345 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RM11_RS06350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RM11_RS06355 PF01245 Ribosomal protein L19 RM11_RS06360 PF01746 tRNA (Guanine-1)-methyltransferase RM11_RS06365 PF01782 RimM N-terminal domain RM11_RS06365 PF05239 PRC-barrel domain RM11_RS06370 PF07277 RM11_RS06370 RM11_RS06375 PF00589 Phage integrase family RM11_RS06375 PF02899 Phage integrase, N-terminal SAM-like domain RM11_RS06380 PF01722 BolA-like protein RM11_RS06385 PF00226 DnaJ domain RM11_RS06390 PF07728 AAA domain (dynein-related subfamily) RM11_RS06390 PF08406 RM11_RS06390 RM11_RS06390 PF12556 RM11_RS06390 RM11_RS06395 PF06213 RM11_RS06395 RM11_RS06395 PF11775 RM11_RS06395 RM11_RS06400 PF00830 Ribosomal L28 family RM11_RS06405 PF02104 RM11_RS06405 RM11_RS06410 PF01808 AICARFT/IMPCHase bienzyme RM11_RS06410 PF02142 MGS-like domain RM11_RS06415 PF07940 Heparinase II/III-like protein RM11_RS06420 PF01029 NusB family RM11_RS06420 PF01189 NOL1/NOP2/sun family RM11_RS06425 PF01435 Peptidase family M48 RM11_RS06430 PF07896 Protein of unknown function (DUF1674) RM11_RS06435 PF00886 Ribosomal protein S16 RM11_RS06440 PF01817 Chorismate mutase type II RM11_RS06445 PF00448 SRP54-type protein, GTPase domain RM11_RS06445 PF02881 SRP54-type protein, helical bundle domain RM11_RS06445 PF02978 Signal peptide binding domain RM11_RS06455 PF05088 RM11_RS06455 RM11_RS06460 PF09898 RM11_RS06460 RM11_RS06465 PF00117 Glutamine amidotransferase class-I RM11_RS06470 PF07219 RM11_RS06470 RM11_RS06470 PF13432 Tetratricopeptide repeat RM11_RS06480 PF00814 Glycoprotease family RM11_RS06490 PF01878 EVE domain RM11_RS06500 PF00072 Response regulator receiver domain RM11_RS06500 PF00486 Transcriptional regulatory protein, C terminal RM11_RS06505 PF08241 Methyltransferase domain RM11_RS06510 PF13779 RM11_RS06510 RM11_RS06515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RM11_RS06515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RM11_RS06530 PF08534 Redoxin RM11_RS06540 PF03631 RM11_RS06540 RM11_RS06550 PF02153 Prephenate dehydrogenase RM11_RS06555 PF06144 DNA polymerase III, delta subunit RM11_RS06580 PF08543 Phosphomethylpyrimidine kinase RM11_RS06590 PF00768 D-alanyl-D-alanine carboxypeptidase RM11_RS06605 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RM11_RS06610 PF00589 Phage integrase family RM11_RS06610 PF02899 Phage integrase, N-terminal SAM-like domain RM11_RS06615 PF01202 Shikimate kinase RM11_RS06620 PF01761 3-dehydroquinate synthase RM11_RS06630 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RM11_RS06635 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RM11_RS06640 PF03334 RM11_RS06640 RM11_RS06645 PF04066 RM11_RS06645 RM11_RS06650 PF01899 RM11_RS06650 RM11_RS06655 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RM11_RS06660 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RM11_RS06665 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RM11_RS06665 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RM11_RS06665 PF04039 RM11_RS06665 RM11_RS06665 PF13244 RM11_RS06665 RM11_RS06670 PF07886 RM11_RS06670 RM11_RS06680 PF03435 Saccharopine dehydrogenase RM11_RS06680 PF16653 RM11_RS06680 RM11_RS06685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RM11_RS06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase RM11_RS06690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RM11_RS06690 PF00364 Biotin-requiring enzyme RM11_RS06690 PF02817 e3 binding domain RM11_RS06700 PF00549 CoA-ligase RM11_RS06700 PF02629 CoA binding domain RM11_RS06705 PF00549 CoA-ligase RM11_RS06705 PF08442 ATP-grasp domain RM11_RS06710 PF00056 lactate/malate dehydrogenase, NAD binding domain RM11_RS06710 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RM11_RS06715 PF03969 AFG1-like ATPase RM11_RS06720 PF02974 Protease inhibitor Inh RM11_RS06725 PF01678 Diaminopimelate epimerase RM11_RS06730 PF00919 Uncharacterized protein family UPF0004 RM11_RS06730 PF04055 Radical SAM superfamily RM11_RS06735 PF00448 SRP54-type protein, GTPase domain RM11_RS06735 PF02881 SRP54-type protein, helical bundle domain RM11_RS06740 PF04279 RM11_RS06740 RM11_RS06750 PF02195 ParB-like nuclease domain RM11_RS06755 PF13614 AAA domain RM11_RS06760 PF02527 rRNA small subunit methyltransferase G RM11_RS06765 PF01134 Glucose inhibited division protein A RM11_RS06765 PF13932 GidA associated domain 3 RM11_RS06770 PF01926 50S ribosome-binding GTPase RM11_RS06770 PF10396 GTP-binding protein TrmE N-terminus RM11_RS06770 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE RM11_RS06775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RM11_RS06775 PF07497 Rho termination factor, RNA-binding domain RM11_RS06775 PF07498 Rho termination factor, N-terminal domain