locus-tag class description D1092_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix D1092_RS00005 PF00308 Bacterial dnaA protein D1092_RS00005 PF11638 DnaA N-terminal domain D1092_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1092_RS00010 PF02767 DNA polymerase III beta subunit, central domain D1092_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1092_RS00015 PF02463 RecF/RecN/SMC N terminal domain D1092_RS00020 PF01220 Dehydroquinase class II D1092_RS00025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D1092_RS00025 PF06481 COX Aromatic Rich Motif D1092_RS00030 PF00115 Cytochrome C and Quinol oxidase polypeptide I D1092_RS00035 PF00510 Cytochrome c oxidase subunit III D1092_RS00040 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D1092_RS00045 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1092_RS00045 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1092_RS00055 PF00109 Beta-ketoacyl synthase, N-terminal domain D1092_RS00055 PF02801 Beta-ketoacyl synthase, C-terminal domain D1092_RS00060 PF07977 FabA-like domain D1092_RS00075 PF01165 Ribosomal protein S21 D1092_RS00080 PF01268 Formate--tetrahydrofolate ligase D1092_RS00095 PF00873 AcrB/AcrD/AcrF family D1092_RS00100 PF00342 Phosphoglucose isomerase D1092_RS00115 PF00829 Ribosomal prokaryotic L21 protein D1092_RS00120 PF01016 Ribosomal L27 protein D1092_RS00125 PF05524 PEP-utilising enzyme, N-terminal D1092_RS00125 PF00391 PEP-utilising enzyme, mobile domain D1092_RS00125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1092_RS00125 PF02896 PEP-utilising enzyme, TIM barrel domain D1092_RS00125 PF00381 PTS HPr component phosphorylation site D1092_RS00135 PF02655 ATP-grasp domain D1092_RS00135 PF00206 Lyase D1092_RS00150 PF07690 Major Facilitator Superfamily D1092_RS00170 PF05662 Coiled stalk of trimeric autotransporter adhesin D1092_RS00170 PF05658 Head domain of trimeric autotransporter adhesin D1092_RS00170 PF05658 Head domain of trimeric autotransporter adhesin D1092_RS00170 PF03895 YadA-like membrane anchor domain D1092_RS00170 PF03895 YadA-like membrane anchor domain D1092_RS00170 PF05658 Head domain of trimeric autotransporter adhesin D1092_RS00170 PF05662 Coiled stalk of trimeric autotransporter adhesin D1092_RS00170 PF03895 YadA-like membrane anchor domain D1092_RS00170 PF05662 Coiled stalk of trimeric autotransporter adhesin D1092_RS00175 PF03895 YadA-like membrane anchor domain D1092_RS00175 PF03895 YadA-like membrane anchor domain D1092_RS00175 PF05662 Coiled stalk of trimeric autotransporter adhesin D1092_RS00175 PF05658 Head domain of trimeric autotransporter adhesin D1092_RS00175 PF05658 Head domain of trimeric autotransporter adhesin D1092_RS00175 PF05662 Coiled stalk of trimeric autotransporter adhesin D1092_RS00215 PF05662 Coiled stalk of trimeric autotransporter adhesin D1092_RS00215 PF05658 Head domain of trimeric autotransporter adhesin D1092_RS00215 PF03895 YadA-like membrane anchor domain D1092_RS00220 PF03895 YadA-like membrane anchor domain D1092_RS00220 PF05658 Head domain of trimeric autotransporter adhesin D1092_RS00220 PF05662 Coiled stalk of trimeric autotransporter adhesin D1092_RS00220 PF05658 Head domain of trimeric autotransporter adhesin D1092_RS00220 PF03895 YadA-like membrane anchor domain D1092_RS00220 PF05662 Coiled stalk of trimeric autotransporter adhesin D1092_RS00230 PF02541 Ppx/GppA phosphatase family D1092_RS00235 PF01728 FtsJ-like methyltransferase D1092_RS00240 PF01926 50S ribosome-binding GTPase D1092_RS00240 PF01018 GTP1/OBG D1092_RS00245 PF00696 Amino acid kinase family D1092_RS00245 PF01472 PUA domain D1092_RS00250 PF00171 Aldehyde dehydrogenase family D1092_RS00255 PF01467 Cytidylyltransferase-like D1092_RS00265 PF02590 Predicted SPOUT methyltransferase D1092_RS00275 PF03572 Peptidase family S41 D1092_RS00275 PF13180 PDZ domain D1092_RS00280 PF00293 NUDIX domain D1092_RS00285 PF06776 Invasion associated locus B (IalB) protein D1092_RS00290 PF02325 YGGT family D1092_RS00295 PF02594 Uncharacterised ACR, YggU family COG1872 D1092_RS00300 PF00719 Inorganic pyrophosphatase D1092_RS00305 PF03144 Elongation factor Tu domain 2 D1092_RS00305 PF00679 Elongation factor G C-terminus D1092_RS00305 PF00009 Elongation factor Tu GTP binding domain D1092_RS00310 PF03448 MgtE intracellular N domain D1092_RS00310 PF01769 Divalent cation transporter D1092_RS00310 PF00571 CBS domain D1092_RS00315 PF01432 Peptidase family M3 D1092_RS00325 PF13406 Transglycosylase SLT domain D1092_RS00330 PF00483 Nucleotidyl transferase D1092_RS00335 PF01380 SIS domain D1092_RS00335 PF00571 CBS domain D1092_RS00345 PF00072 Response regulator receiver domain D1092_RS00345 PF02954 Bacterial regulatory protein, Fis family D1092_RS00345 PF00158 Sigma-54 interaction domain D1092_RS00350 PF13091 PLD-like domain D1092_RS00355 PF00571 CBS domain D1092_RS00355 PF00478 IMP dehydrogenase / GMP reductase domain D1092_RS00360 PF01189 16S rRNA methyltransferase RsmB/F D1092_RS00360 PF01029 NusB family D1092_RS00365 PF00958 GMP synthase C terminal domain D1092_RS00365 PF02540 NAD synthase D1092_RS00365 PF00117 Glutamine amidotransferase class-I D1092_RS00370 PF03009 Glycerophosphoryl diester phosphodiesterase family D1092_RS00375 PF13416 Bacterial extracellular solute-binding protein D1092_RS00380 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS00385 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS00390 PF00005 ABC transporter D1092_RS00395 PF01297 Zinc-uptake complex component A periplasmic D1092_RS00400 PF00950 ABC 3 transport family D1092_RS00405 PF00005 ABC transporter D1092_RS00415 PF07972 NrdI Flavodoxin like D1092_RS00420 PF02867 Ribonucleotide reductase, barrel domain D1092_RS00420 PF00317 Ribonucleotide reductase, all-alpha domain D1092_RS00420 PF08343 Ribonucleotide reductase N-terminal D1092_RS00425 PF00268 Ribonucleotide reductase, small chain D1092_RS00430 PF17827 PrmC N-terminal domain D1092_RS00430 PF05175 Methyltransferase small domain D1092_RS00435 PF00472 RF-1 domain D1092_RS00435 PF03462 PCRF domain D1092_RS00440 PF01475 Ferric uptake regulator family D1092_RS00445 PF01043 SecA preprotein cross-linking domain D1092_RS00445 PF07516 SecA Wing and Scaffold domain D1092_RS00445 PF02810 SEC-C motif D1092_RS00445 PF07517 SecA DEAD-like domain D1092_RS00450 PF00639 PPIC-type PPIASE domain D1092_RS00455 PF01960 ArgJ family D1092_RS00460 PF00293 NUDIX domain D1092_RS00465 PF00877 NlpC/P60 family D1092_RS00470 PF00883 Cytosol aminopeptidase family, catalytic domain D1092_RS00470 PF02789 Cytosol aminopeptidase family, N-terminal domain D1092_RS00475 PF00485 Phosphoribulokinase / Uridine kinase family D1092_RS00480 PF00710 Asparaginase, N-terminal D1092_RS00480 PF17763 Glutaminase/Asparaginase C-terminal domain D1092_RS00485 PF00227 Proteasome subunit D1092_RS00490 PF10431 C-terminal, D2-small domain, of ClpB protein D1092_RS00490 PF07724 AAA domain (Cdc48 subfamily) D1092_RS00490 PF00004 ATPase family associated with various cellular activities (AAA) D1092_RS00495 PF08468 Methyltransferase small domain N-terminal D1092_RS00495 PF05175 Methyltransferase small domain D1092_RS00500 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1092_RS00500 PF01138 3' exoribonuclease family, domain 1 D1092_RS00500 PF03725 3' exoribonuclease family, domain 2 D1092_RS00500 PF00575 S1 RNA binding domain D1092_RS00500 PF00013 KH domain D1092_RS00505 PF00312 Ribosomal protein S15 D1092_RS00510 PF07690 Major Facilitator Superfamily D1092_RS00515 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1092_RS00515 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1092_RS00520 PF02033 Ribosome-binding factor A D1092_RS00525 PF00009 Elongation factor Tu GTP binding domain D1092_RS00525 PF11987 Translation-initiation factor 2 D1092_RS00525 PF08364 Bacterial translation initiation factor IF-2 associated region D1092_RS00525 PF04760 Translation initiation factor IF-2, N-terminal region D1092_RS00535 PF13184 NusA-like KH domain D1092_RS00535 PF00575 S1 RNA binding domain D1092_RS00535 PF08529 NusA N-terminal domain D1092_RS00540 PF02576 RimP N-terminal domain D1092_RS00540 PF17384 RimP C-terminal SH3 domain D1092_RS00545 PF02390 Putative methyltransferase D1092_RS00550 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1092_RS00550 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1092_RS00550 PF02772 S-adenosylmethionine synthetase, central domain D1092_RS00555 PF01381 Helix-turn-helix D1092_RS00560 PF00795 Carbon-nitrogen hydrolase D1092_RS00565 PF03471 Transporter associated domain D1092_RS00565 PF00571 CBS domain D1092_RS00570 PF02130 Uncharacterized protein family UPF0054 D1092_RS00575 PF02562 PhoH-like protein D1092_RS00580 PF04055 Radical SAM superfamily D1092_RS00580 PF00919 Uncharacterized protein family UPF0004 D1092_RS00580 PF01938 TRAM domain D1092_RS00590 PF00814 Glycoprotease family D1092_RS00595 PF03601 Conserved hypothetical protein 698 D1092_RS00600 PF13662 Toprim domain D1092_RS00600 PF02132 RecR protein D1092_RS00605 PF02575 YbaB/EbfC DNA-binding family D1092_RS00610 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D1092_RS00610 PF12169 DNA polymerase III subunits gamma and tau domain III D1092_RS00610 PF12170 DNA polymerase III tau subunit V interacting with alpha D1092_RS00625 PF01817 Chorismate mutase type II D1092_RS00625 PF00800 Prephenate dehydratase D1092_RS00630 PF02348 Cytidylyltransferase D1092_RS00635 PF00034 Cytochrome c D1092_RS00640 PF00581 Rhodanese-like domain D1092_RS00640 PF00899 ThiF family D1092_RS00645 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D1092_RS00645 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D1092_RS00655 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS00665 PF00005 ABC transporter D1092_RS00670 PF01895 PhoU domain D1092_RS00680 PF02073 Thermophilic metalloprotease (M29) D1092_RS00685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1092_RS00685 PF06827 Zinc finger found in FPG and IleRS D1092_RS00685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1092_RS00695 PF01612 3'-5' exonuclease D1092_RS00695 PF00476 DNA polymerase family A D1092_RS00705 PF13505 Outer membrane protein beta-barrel domain D1092_RS00710 PF13505 Outer membrane protein beta-barrel domain D1092_RS00730 PF13505 Outer membrane protein beta-barrel domain D1092_RS00735 PF00133 tRNA synthetases class I (I, L, M and V) D1092_RS00735 PF08264 Anticodon-binding domain of tRNA D1092_RS00750 PF14437 MafB19-like deaminase D1092_RS00755 PF01479 S4 domain D1092_RS00755 PF00849 RNA pseudouridylate synthase D1092_RS00770 PF01523 Putative modulator of DNA gyrase D1092_RS00775 PF00459 Inositol monophosphatase family D1092_RS00785 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1092_RS00790 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1092_RS00800 PF01119 DNA mismatch repair protein, C-terminal domain D1092_RS00800 PF08676 MutL C terminal dimerisation domain D1092_RS00805 PF00692 dUTPase D1092_RS00810 PF01070 FMN-dependent dehydrogenase D1092_RS00845 PF00324 Amino acid permease D1092_RS00850 PF00005 ABC transporter D1092_RS00855 PF02361 Cobalt transport protein D1092_RS00860 PF02632 BioY family D1092_RS00865 PF02632 BioY family D1092_RS00885 PF00709 Adenylosuccinate synthetase D1092_RS00895 PF04545 Sigma-70, region 4 D1092_RS00895 PF04542 Sigma-70 region 2 D1092_RS00895 PF00140 Sigma-70 factor, region 1.2 D1092_RS00900 PF00849 RNA pseudouridylate synthase D1092_RS00905 PF00171 Aldehyde dehydrogenase family D1092_RS00910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1092_RS00910 PF17854 FtsK alpha domain D1092_RS00910 PF01580 FtsK/SpoIIIE family D1092_RS00910 PF09397 Ftsk gamma domain D1092_RS00915 PF00989 PAS fold D1092_RS00915 PF13188 PAS domain D1092_RS00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS00915 PF00512 His Kinase A (phospho-acceptor) domain D1092_RS00920 PF01741 Large-conductance mechanosensitive channel, MscL D1092_RS00925 PF01180 Dihydroorotate dehydrogenase D1092_RS00990 PF01554 MatE D1092_RS01005 PF18273 Type III R-M EcoP15I C-terminal domain D1092_RS01005 PF01555 DNA methylase D1092_RS01035 PF13302 Acetyltransferase (GNAT) domain D1092_RS01040 PF00120 Glutamine synthetase, catalytic domain D1092_RS01045 PF01266 FAD dependent oxidoreductase D1092_RS01050 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1092_RS01050 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1092_RS01055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1092_RS01060 PF00920 Dehydratase family D1092_RS01065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1092_RS01065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1092_RS01075 PF04452 RNA methyltransferase D1092_RS01080 PF04107 Glutamate-cysteine ligase family 2(GCS2) D1092_RS01090 PF00375 Sodium:dicarboxylate symporter family D1092_RS01105 PF00462 Glutaredoxin D1092_RS01110 PF08241 Methyltransferase domain D1092_RS01115 PF13840 ACT domain D1092_RS01115 PF01842 ACT domain D1092_RS01115 PF00696 Amino acid kinase family D1092_RS01120 PF02223 Thymidylate kinase D1092_RS01125 PF06965 Na+/H+ antiporter 1 D1092_RS01135 PF02080 TrkA-C domain D1092_RS01135 PF03600 Citrate transporter D1092_RS01145 PF01926 50S ribosome-binding GTPase D1092_RS01145 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1092_RS01155 PF00119 ATP synthase A chain D1092_RS01160 PF00137 ATP synthase subunit C D1092_RS01165 PF00430 ATP synthase B/B' CF(0) D1092_RS01170 PF00430 ATP synthase B/B' CF(0) D1092_RS01185 PF03060 Nitronate monooxygenase D1092_RS01225 PF02092 Glycyl-tRNA synthetase beta subunit D1092_RS01225 PF05746 DALR anticodon binding domain D1092_RS01230 PF02091 Glycyl-tRNA synthetase alpha subunit D1092_RS01240 PF00348 Polyprenyl synthetase D1092_RS01245 PF05175 Methyltransferase small domain D1092_RS01245 PF08468 Methyltransferase small domain N-terminal D1092_RS01250 PF01343 Peptidase family S49 D1092_RS01250 PF06965 Na+/H+ antiporter 1 D1092_RS01255 PF08544 GHMP kinases C terminal D1092_RS01260 PF01351 Ribonuclease HII D1092_RS01265 PF03481 Putative GTP-binding controlling metal-binding D1092_RS01265 PF01300 Telomere recombination D1092_RS01270 PF01565 FAD binding domain D1092_RS01270 PF02913 FAD linked oxidases, C-terminal domain D1092_RS01280 PF02843 Phosphoribosylglycinamide synthetase, C domain D1092_RS01280 PF02844 Phosphoribosylglycinamide synthetase, N domain D1092_RS01280 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1092_RS01285 PF01040 UbiA prenyltransferase family D1092_RS01290 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1092_RS01290 PF01243 Pyridoxamine 5'-phosphate oxidase D1092_RS01295 PF01556 DnaJ C terminal domain D1092_RS01295 PF00226 DnaJ domain D1092_RS01305 PF01264 Chorismate synthase D1092_RS01310 PF00925 GTP cyclohydrolase II D1092_RS01310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1092_RS01315 PF02609 Exonuclease VII small subunit D1092_RS01320 PF02780 Transketolase, C-terminal domain D1092_RS01320 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D1092_RS01320 PF02779 Transketolase, pyrimidine binding domain D1092_RS01325 PF01479 S4 domain D1092_RS01325 PF01728 FtsJ-like methyltransferase D1092_RS01330 PF05958 tRNA (Uracil-5-)-methyltransferase D1092_RS01335 PF01523 Putative modulator of DNA gyrase D1092_RS01345 PF01040 UbiA prenyltransferase family D1092_RS01350 PF02401 LytB protein D1092_RS01355 PF01636 Phosphotransferase enzyme family D1092_RS01360 PF00075 RNase H D1092_RS01370 PF02622 Uncharacterized ACR, COG1678 D1092_RS01375 PF00563 EAL domain D1092_RS01375 PF00990 Diguanylate cyclase, GGDEF domain D1092_RS01375 PF00498 FHA domain D1092_RS01380 PF00675 Insulinase (Peptidase family M16) D1092_RS01380 PF05193 Peptidase M16 inactive domain D1092_RS01385 PF14821 Threonine synthase N terminus D1092_RS01385 PF00291 Pyridoxal-phosphate dependent enzyme D1092_RS01415 PF18755 Restriction Enzyme Adenine Methylase Associated D1092_RS01415 PF01555 DNA methylase D1092_RS01420 PF00730 HhH-GPD superfamily base excision DNA repair protein D1092_RS01420 PF14815 NUDIX domain D1092_RS01430 PF13462 Thioredoxin D1092_RS01435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D1092_RS01435 PF02896 PEP-utilising enzyme, TIM barrel domain D1092_RS01435 PF00391 PEP-utilising enzyme, mobile domain D1092_RS01460 PF02657 Fe-S metabolism associated domain D1092_RS01465 PF05443 ROS/MUCR transcriptional regulator protein D1092_RS01470 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D1092_RS01470 PF00326 Prolyl oligopeptidase family D1092_RS01475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1092_RS01475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1092_RS01550 PF01381 Helix-turn-helix D1092_RS01560 PF00436 Single-strand binding protein family D1092_RS01610 PF00905 Penicillin binding protein transpeptidase domain D1092_RS01610 PF00912 Transglycosylase D1092_RS01620 PF00072 Response regulator receiver domain D1092_RS01620 PF00486 Transcriptional regulatory protein, C terminal D1092_RS01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS01635 PF03100 CcmE D1092_RS01640 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1092_RS01640 PF01578 Cytochrome C assembly protein D1092_RS01645 PF03918 Cytochrome C biogenesis protein D1092_RS01650 PF17820 PDZ domain D1092_RS01650 PF13180 PDZ domain D1092_RS01655 PF00486 Transcriptional regulatory protein, C terminal D1092_RS01655 PF00072 Response regulator receiver domain D1092_RS01660 PF00512 His Kinase A (phospho-acceptor) domain D1092_RS01660 PF00672 HAMP domain D1092_RS01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS01665 PF03710 Glutamate-ammonia ligase adenylyltransferase D1092_RS01665 PF08335 GlnD PII-uridylyltransferase D1092_RS01670 PF13505 Outer membrane protein beta-barrel domain D1092_RS01695 PF07726 ATPase family associated with various cellular activities (AAA) D1092_RS01695 PF17863 AAA lid domain D1092_RS01700 PF01743 Poly A polymerase head domain D1092_RS01700 PF12627 Probable RNA and SrmB- binding site of polymerase A D1092_RS01700 PF13735 tRNA nucleotidyltransferase domain 2 putative D1092_RS01705 PF00588 SpoU rRNA Methylase family D1092_RS01710 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D1092_RS01710 PF00355 Rieske [2Fe-2S] domain D1092_RS01715 PF00033 Cytochrome b/b6/petB D1092_RS01715 PF00032 Cytochrome b(C-terminal)/b6/petD D1092_RS01720 PF00033 Cytochrome b/b6/petB D1092_RS01720 PF00032 Cytochrome b(C-terminal)/b6/petD D1092_RS01720 PF02167 Cytochrome C1 family D1092_RS01730 PF06071 Protein of unknown function (DUF933) D1092_RS01730 PF01926 50S ribosome-binding GTPase D1092_RS01735 PF03734 L,D-transpeptidase catalytic domain D1092_RS01735 PF17969 L,D-transpeptidase C-terminal domain D1092_RS01740 PF01195 Peptidyl-tRNA hydrolase D1092_RS01745 PF01386 Ribosomal L25p family D1092_RS01745 PF14693 Ribosomal protein TL5, C-terminal domain D1092_RS01755 PF14572 Phosphoribosyl synthetase-associated domain D1092_RS01755 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1092_RS01760 PF02578 Multi-copper polyphenol oxidoreductase laccase D1092_RS01770 PF01790 Prolipoprotein diacylglyceryl transferase D1092_RS01785 PF00512 His Kinase A (phospho-acceptor) domain D1092_RS01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS01785 PF00672 HAMP domain D1092_RS01785 PF16527 Two-component sensor protein CpxA, periplasmic domain D1092_RS01790 PF00486 Transcriptional regulatory protein, C terminal D1092_RS01790 PF00072 Response regulator receiver domain D1092_RS01795 PF00753 Metallo-beta-lactamase superfamily D1092_RS01805 PF04851 Type III restriction enzyme, res subunit D1092_RS01805 PF12344 Ultra-violet resistance protein B D1092_RS01805 PF00271 Helicase conserved C-terminal domain D1092_RS01805 PF17757 UvrB interaction domain D1092_RS01805 PF02151 UvrB/uvrC motif D1092_RS01815 PF03449 Transcription elongation factor, N-terminal D1092_RS01815 PF01272 Transcription elongation factor, GreA/GreB, C-term D1092_RS01820 PF00534 Glycosyl transferases group 1 D1092_RS01825 PF02386 Cation transport protein D1092_RS01830 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1092_RS01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1092_RS01835 PF03466 LysR substrate binding domain D1092_RS01840 PF00155 Aminotransferase class I and II D1092_RS01845 PF00313 'Cold-shock' DNA-binding domain D1092_RS01850 PF02142 MGS-like domain D1092_RS01850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1092_RS01850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D1092_RS01860 PF00989 PAS fold D1092_RS01860 PF00512 His Kinase A (phospho-acceptor) domain D1092_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS01865 PF01433 Peptidase family M1 domain D1092_RS01865 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D1092_RS01865 PF11940 Domain of unknown function (DUF3458) Ig-like fold D1092_RS01875 PF08543 Phosphomethylpyrimidine kinase D1092_RS01880 PF02581 Thiamine monophosphate synthase D1092_RS01885 PF05690 Thiazole biosynthesis protein ThiG D1092_RS01895 PF01266 FAD dependent oxidoreductase D1092_RS01900 PF01964 Radical SAM ThiC family D1092_RS01900 PF13667 ThiC-associated domain D1092_RS01905 PF07484 Phage Tail Collar Domain D1092_RS01910 PF00005 ABC transporter D1092_RS01915 PF01032 FecCD transport family D1092_RS01920 PF01497 Periplasmic binding protein D1092_RS01925 PF05171 Haemin-degrading HemS.ChuX domain D1092_RS01930 PF07715 TonB-dependent Receptor Plug Domain D1092_RS01930 PF00593 TonB dependent receptor D1092_RS01940 PF01464 Transglycosylase SLT domain D1092_RS01940 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1092_RS01945 PF00701 Dihydrodipicolinate synthetase family D1092_RS01950 PF01668 SmpB protein D1092_RS01955 PF03167 Uracil DNA glycosylase superfamily D1092_RS01960 PF01192 RNA polymerase Rpb6 D1092_RS01965 PF04607 Region found in RelA / SpoT proteins D1092_RS01965 PF13291 ACT domain D1092_RS01965 PF02824 TGS domain D1092_RS01970 PF00156 Phosphoribosyl transferase domain D1092_RS01980 PF01648 4'-phosphopantetheinyl transferase superfamily D1092_RS01985 PF10502 Signal peptidase, peptidase S26 D1092_RS01990 PF14622 Ribonuclease-III-like D1092_RS01990 PF00035 Double-stranded RNA binding motif D1092_RS01995 PF07650 KH domain D1092_RS01995 PF01926 50S ribosome-binding GTPase D1092_RS02000 PF02565 Recombination protein O C terminal D1092_RS02000 PF11967 Recombination protein O N terminal D1092_RS02005 PF02569 Pantoate-beta-alanine ligase D1092_RS02010 PF02548 Ketopantoate hydroxymethyltransferase D1092_RS02015 PF01966 HD domain D1092_RS02020 PF01571 Aminomethyltransferase folate-binding domain D1092_RS02025 PF01979 Amidohydrolase family D1092_RS02035 PF01406 tRNA synthetases class I (C) catalytic domain D1092_RS02045 PF00664 ABC transporter transmembrane region D1092_RS02045 PF00005 ABC transporter D1092_RS02050 PF02666 Phosphatidylserine decarboxylase D1092_RS02055 PF01066 CDP-alcohol phosphatidyltransferase D1092_RS02060 PF00106 short chain dehydrogenase D1092_RS02065 PF00156 Phosphoribosyl transferase domain D1092_RS02065 PF13537 Glutamine amidotransferase domain D1092_RS02075 PF18073 Rubredoxin metal binding domain D1092_RS02075 PF06745 KaiC D1092_RS02080 PF03796 DnaB-like helicase C terminal domain D1092_RS02080 PF00772 DnaB-like helicase N terminal domain D1092_RS02085 PF01281 Ribosomal protein L9, N-terminal domain D1092_RS02085 PF03948 Ribosomal protein L9, C-terminal domain D1092_RS02095 PF01084 Ribosomal protein S18 D1092_RS02100 PF01250 Ribosomal protein S6 D1092_RS02110 PF01569 PAP2 superfamily D1092_RS02115 PF00698 Acyl transferase domain D1092_RS02125 PF00550 Phosphopantetheine attachment site D1092_RS02130 PF02801 Beta-ketoacyl synthase, C-terminal domain D1092_RS02130 PF00109 Beta-ketoacyl synthase, N-terminal domain D1092_RS02135 PF02618 YceG-like family D1092_RS02140 PF00625 Guanylate kinase D1092_RS02145 PF00398 Ribosomal RNA adenine dimethylase D1092_RS02150 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D1092_RS02190 PF00083 Sugar (and other) transporter D1092_RS02190 PF07690 Major Facilitator Superfamily D1092_RS02195 PF03797 Autotransporter beta-domain D1092_RS02195 PF03212 Pertactin D1092_RS02195 PF16168 Adhesin of bacterial autotransporter system, probable stalk D1092_RS02195 PF13018 Extended Signal Peptide of Type V secretion system D1092_RS02200 PF03212 Pertactin D1092_RS02200 PF13018 Extended Signal Peptide of Type V secretion system D1092_RS02200 PF03797 Autotransporter beta-domain D1092_RS02200 PF16168 Adhesin of bacterial autotransporter system, probable stalk D1092_RS02205 PF03797 Autotransporter beta-domain D1092_RS02205 PF13018 Extended Signal Peptide of Type V secretion system D1092_RS02205 PF03212 Pertactin D1092_RS02205 PF16168 Adhesin of bacterial autotransporter system, probable stalk D1092_RS02210 PF00334 Nucleoside diphosphate kinase D1092_RS02215 PF01066 CDP-alcohol phosphatidyltransferase D1092_RS02220 PF01541 GIY-YIG catalytic domain D1092_RS02220 PF12826 Helix-hairpin-helix motif D1092_RS02220 PF02151 UvrB/uvrC motif D1092_RS02220 PF08459 UvrC Helix-hairpin-helix N-terminal D1092_RS02225 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1092_RS02230 PF02416 mttA/Hcf106 family D1092_RS02235 PF02416 mttA/Hcf106 family D1092_RS02240 PF00902 Sec-independent protein translocase protein (TatC) D1092_RS02245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1092_RS02245 PF02403 Seryl-tRNA synthetase N-terminal domain D1092_RS02255 PF01551 Peptidase family M23 D1092_RS02260 PF02699 Preprotein translocase subunit D1092_RS02280 PF00121 Triosephosphate isomerase D1092_RS02285 PF03840 Preprotein translocase SecG subunit D1092_RS02290 PF00117 Glutamine amidotransferase class-I D1092_RS02290 PF06418 CTP synthase N-terminus D1092_RS02295 PF00793 DAHP synthetase I family D1092_RS02300 PF03952 Enolase, N-terminal domain D1092_RS02300 PF00113 Enolase, C-terminal TIM barrel domain D1092_RS02315 PF05154 TM2 domain D1092_RS02325 PF00676 Dehydrogenase E1 component D1092_RS02330 PF00364 Biotin-requiring enzyme D1092_RS02330 PF02779 Transketolase, pyrimidine binding domain D1092_RS02330 PF02780 Transketolase, C-terminal domain D1092_RS02335 PF02817 e3 binding domain D1092_RS02335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1092_RS02335 PF00364 Biotin-requiring enzyme D1092_RS02340 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1092_RS02340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1092_RS02345 PF04055 Radical SAM superfamily D1092_RS02350 PF03364 Polyketide cyclase / dehydrase and lipid transport D1092_RS02355 PF00994 Probable molybdopterin binding domain D1092_RS02355 PF18146 Damage-inducible protein CinA KH domain D1092_RS02355 PF02464 Competence-damaged protein D1092_RS02360 PF02542 YgbB family D1092_RS02360 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1092_RS02365 PF02082 Transcriptional regulator D1092_RS02370 PF00512 His Kinase A (phospho-acceptor) domain D1092_RS02370 PF00672 HAMP domain D1092_RS02370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS02370 PF00989 PAS fold D1092_RS02375 PF00158 Sigma-54 interaction domain D1092_RS02375 PF00072 Response regulator receiver domain D1092_RS02375 PF02954 Bacterial regulatory protein, Fis family D1092_RS02380 PF02080 TrkA-C domain D1092_RS02380 PF02254 TrkA-N domain D1092_RS02390 PF00574 Clp protease D1092_RS02395 PF07724 AAA domain (Cdc48 subfamily) D1092_RS02395 PF10431 C-terminal, D2-small domain, of ClpB protein D1092_RS02395 PF06689 ClpX C4-type zinc finger D1092_RS02400 PF00004 ATPase family associated with various cellular activities (AAA) D1092_RS02400 PF05362 Lon protease (S16) C-terminal proteolytic domain D1092_RS02400 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1092_RS02405 PF00216 Bacterial DNA-binding protein D1092_RS02410 PF01134 Glucose inhibited division protein A D1092_RS02420 PF05698 Bacterial trigger factor protein (TF) C-terminus D1092_RS02420 PF05697 Bacterial trigger factor protein (TF) D1092_RS02420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1092_RS02425 PF02637 GatB domain D1092_RS02425 PF02934 GatB/GatE catalytic domain D1092_RS02435 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) D1092_RS02445 PF00588 SpoU rRNA Methylase family D1092_RS02445 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1092_RS02460 PF03144 Elongation factor Tu domain 2 D1092_RS02460 PF00009 Elongation factor Tu GTP binding domain D1092_RS02460 PF03143 Elongation factor Tu C-terminal domain D1092_RS02470 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D1092_RS02475 PF00467 KOW motif D1092_RS02475 PF02357 Transcription termination factor nusG D1092_RS02480 PF03946 Ribosomal protein L11, N-terminal domain D1092_RS02480 PF00298 Ribosomal protein L11, RNA binding domain D1092_RS02485 PF00687 Ribosomal protein L1p/L10e family D1092_RS02490 PF00466 Ribosomal protein L10 D1092_RS02495 PF16320 Ribosomal protein L7/L12 dimerisation domain D1092_RS02495 PF00542 Ribosomal protein L7/L12 C-terminal domain D1092_RS02500 PF04561 RNA polymerase Rpb2, domain 2 D1092_RS02500 PF04563 RNA polymerase beta subunit D1092_RS02500 PF00562 RNA polymerase Rpb2, domain 6 D1092_RS02500 PF10385 RNA polymerase beta subunit external 1 domain D1092_RS02500 PF04560 RNA polymerase Rpb2, domain 7 D1092_RS02500 PF04565 RNA polymerase Rpb2, domain 3 D1092_RS02505 PF04983 RNA polymerase Rpb1, domain 3 D1092_RS02505 PF00623 RNA polymerase Rpb1, domain 2 D1092_RS02505 PF04997 RNA polymerase Rpb1, domain 1 D1092_RS02505 PF04998 RNA polymerase Rpb1, domain 5 D1092_RS02505 PF05000 RNA polymerase Rpb1, domain 4 D1092_RS02515 PF00881 Nitroreductase family D1092_RS02620 PF10549 ORF11CD3 domain D1092_RS02620 PF09669 Phage regulatory protein Rha (Phage_pRha) D1092_RS02625 PF00436 Single-strand binding protein family D1092_RS02630 PF18836 Beta solenoid repeat from YDCK D1092_RS02655 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D1092_RS02655 PF17287 POTRA domain D1092_RS02655 PF08479 POTRA domain, ShlB-type D1092_RS02660 PF15526 Novel toxin 21 D1092_RS02660 PF05860 haemagglutination activity domain D1092_RS02660 PF04829 Pre-toxin domain with VENN motif D1092_RS02660 PF15526 Novel toxin 21 D1092_RS02660 PF05594 Haemagluttinin repeat D1092_RS02660 PF13332 Hemagglutinin repeat D1092_RS02660 PF13332 Hemagglutinin repeat D1092_RS02660 PF05594 Haemagluttinin repeat D1092_RS02660 PF04829 Pre-toxin domain with VENN motif D1092_RS02660 PF05860 haemagglutination activity domain D1092_RS02695 PF04851 Type III restriction enzyme, res subunit D1092_RS02695 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D1092_RS02695 PF00271 Helicase conserved C-terminal domain D1092_RS02695 PF08463 EcoEI R protein C-terminal D1092_RS02715 PF00589 Phage integrase family D1092_RS02715 PF13356 Arm DNA-binding domain D1092_RS02775 PF00892 EamA-like transporter family D1092_RS02785 PF04851 Type III restriction enzyme, res subunit D1092_RS02785 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D1092_RS02785 PF00271 Helicase conserved C-terminal domain D1092_RS02785 PF08463 EcoEI R protein C-terminal D1092_RS02815 PF00589 Phage integrase family D1092_RS02815 PF13356 Arm DNA-binding domain D1092_RS02855 PF03315 Serine dehydratase beta chain D1092_RS02855 PF03313 Serine dehydratase alpha chain D1092_RS02865 PF07943 Penicillin-binding protein 5, C-terminal domain D1092_RS02865 PF00768 D-alanyl-D-alanine carboxypeptidase D1092_RS02870 PF02617 ATP-dependent Clp protease adaptor protein ClpS D1092_RS02875 PF10431 C-terminal, D2-small domain, of ClpB protein D1092_RS02875 PF02861 Clp amino terminal domain, pathogenicity island component D1092_RS02875 PF00004 ATPase family associated with various cellular activities (AAA) D1092_RS02875 PF07724 AAA domain (Cdc48 subfamily) D1092_RS02875 PF17871 AAA lid domain D1092_RS02880 PF01230 HIT domain D1092_RS02895 PF00318 Ribosomal protein S2 D1092_RS02900 PF00889 Elongation factor TS D1092_RS02905 PF00696 Amino acid kinase family D1092_RS02910 PF01765 Ribosome recycling factor D1092_RS02920 PF17820 PDZ domain D1092_RS02920 PF02163 Peptidase family M50 D1092_RS02925 PF01103 Surface antigen D1092_RS02925 PF07244 Surface antigen variable number repeat D1092_RS02930 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1092_RS02930 PF00132 Bacterial transferase hexapeptide (six repeats) D1092_RS02935 PF07977 FabA-like domain D1092_RS02940 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1092_RS02940 PF00132 Bacterial transferase hexapeptide (six repeats) D1092_RS02945 PF17930 LpxI N-terminal domain D1092_RS02945 PF06230 LpxI C-terminal domain D1092_RS02950 PF02684 Lipid-A-disaccharide synthetase D1092_RS02955 PF00005 ABC transporter D1092_RS02960 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS02965 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS02970 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1092_RS02975 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1092_RS02980 PF00285 Citrate synthase, C-terminal domain D1092_RS02985 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1092_RS02990 PF00753 Metallo-beta-lactamase superfamily D1092_RS02990 PF03772 Competence protein D1092_RS02995 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1092_RS03005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1092_RS03005 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1092_RS03010 PF01474 Class-II DAHP synthetase family D1092_RS03015 PF02540 NAD synthase D1092_RS03015 PF00795 Carbon-nitrogen hydrolase D1092_RS03020 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1092_RS03025 PF00271 Helicase conserved C-terminal domain D1092_RS03025 PF00270 DEAD/DEAH box helicase D1092_RS03030 PF01513 ATP-NAD kinase D1092_RS03060 PF17287 POTRA domain D1092_RS03060 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D1092_RS03060 PF08479 POTRA domain, ShlB-type D1092_RS03065 PF15526 Novel toxin 21 D1092_RS03065 PF04829 Pre-toxin domain with VENN motif D1092_RS03065 PF05594 Haemagluttinin repeat D1092_RS03065 PF13332 Hemagglutinin repeat D1092_RS03065 PF05860 haemagglutination activity domain D1092_RS03065 PF13332 Hemagglutinin repeat D1092_RS03065 PF05594 Haemagluttinin repeat D1092_RS03065 PF15526 Novel toxin 21 D1092_RS03065 PF04829 Pre-toxin domain with VENN motif D1092_RS03065 PF05860 haemagglutination activity domain D1092_RS03075 PF15526 Novel toxin 21 D1092_RS03075 PF04829 Pre-toxin domain with VENN motif D1092_RS03075 PF05860 haemagglutination activity domain D1092_RS03075 PF05594 Haemagluttinin repeat D1092_RS03075 PF13332 Hemagglutinin repeat D1092_RS03100 PF04829 Pre-toxin domain with VENN motif D1092_RS03100 PF15526 Novel toxin 21 D1092_RS03100 PF05860 haemagglutination activity domain D1092_RS03100 PF13332 Hemagglutinin repeat D1092_RS03100 PF05594 Haemagluttinin repeat D1092_RS03135 PF04829 Pre-toxin domain with VENN motif D1092_RS03135 PF05594 Haemagluttinin repeat D1092_RS03135 PF15526 Novel toxin 21 D1092_RS03135 PF05860 haemagglutination activity domain D1092_RS03135 PF13332 Hemagglutinin repeat D1092_RS03170 PF13332 Hemagglutinin repeat D1092_RS03170 PF05860 haemagglutination activity domain D1092_RS03170 PF05594 Haemagluttinin repeat D1092_RS03170 PF04829 Pre-toxin domain with VENN motif D1092_RS03170 PF15526 Novel toxin 21 D1092_RS03195 PF02222 ATP-grasp domain D1092_RS03220 PF03951 Glutamine synthetase, beta-Grasp domain D1092_RS03220 PF00120 Glutamine synthetase, catalytic domain D1092_RS03225 PF00543 Nitrogen regulatory protein P-II D1092_RS03230 PF17760 UvrA interaction domain D1092_RS03230 PF17755 UvrA DNA-binding domain D1092_RS03235 PF00436 Single-strand binding protein family D1092_RS03240 PF00521 DNA gyrase/topoisomerase IV, subunit A D1092_RS03240 PF03989 DNA gyrase C-terminal domain, beta-propeller D1092_RS03245 PF01467 Cytidylyltransferase-like D1092_RS03250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1092_RS03255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1092_RS03260 PF01702 Queuine tRNA-ribosyltransferase D1092_RS03265 PF07690 Major Facilitator Superfamily D1092_RS03270 PF07690 Major Facilitator Superfamily D1092_RS03275 PF00180 Isocitrate/isopropylmalate dehydrogenase D1092_RS03285 PF03447 Homoserine dehydrogenase, NAD binding domain D1092_RS03285 PF01842 ACT domain D1092_RS03285 PF00742 Homoserine dehydrogenase D1092_RS03290 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D1092_RS03295 PF01063 Amino-transferase class IV D1092_RS03310 PF05746 DALR anticodon binding domain D1092_RS03310 PF03485 Arginyl tRNA synthetase N terminal domain D1092_RS03310 PF00750 tRNA synthetases class I (R) D1092_RS03315 PF13286 Phosphohydrolase-associated domain D1092_RS03315 PF01966 HD domain D1092_RS03320 PF01521 Iron-sulphur cluster biosynthesis D1092_RS03330 PF02683 Cytochrome C biogenesis protein transmembrane region D1092_RS03335 PF12804 MobA-like NTP transferase domain D1092_RS03335 PF00132 Bacterial transferase hexapeptide (six repeats) D1092_RS03335 PF14602 Hexapeptide repeat of succinyl-transferase D1092_RS03340 PF01380 SIS domain D1092_RS03345 PF17191 RecG wedge domain D1092_RS03345 PF00271 Helicase conserved C-terminal domain D1092_RS03345 PF00270 DEAD/DEAH box helicase D1092_RS03350 PF02811 PHP domain D1092_RS03350 PF14579 Helix-hairpin-helix motif D1092_RS03350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1092_RS03350 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1092_RS03355 PF01494 FAD binding domain D1092_RS03365 PF02503 Polyphosphate kinase middle domain D1092_RS03365 PF13090 Polyphosphate kinase C-terminal domain 2 D1092_RS03365 PF17941 Polyphosphate kinase C-terminal domain 1 D1092_RS03365 PF13089 Polyphosphate kinase N-terminal domain D1092_RS03370 PF02541 Ppx/GppA phosphatase family D1092_RS03375 PF00570 HRDC domain D1092_RS03375 PF01612 3'-5' exonuclease D1092_RS03380 PF01336 OB-fold nucleic acid binding domain D1092_RS03380 PF00152 tRNA synthetases class II (D, K and N) D1092_RS03380 PF02938 GAD domain D1092_RS03385 PF03989 DNA gyrase C-terminal domain, beta-propeller D1092_RS03385 PF00521 DNA gyrase/topoisomerase IV, subunit A D1092_RS03390 PF07690 Major Facilitator Superfamily D1092_RS03395 PF00462 Glutaredoxin D1092_RS03405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1092_RS03405 PF02769 AIR synthase related protein, C-terminal domain D1092_RS03405 PF00586 AIR synthase related protein, N-terminal domain D1092_RS03415 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase D1092_RS03420 PF01259 SAICAR synthetase D1092_RS03430 PF00206 Lyase D1092_RS03430 PF10397 Adenylosuccinate lyase C-terminus D1092_RS03435 PF00834 Ribulose-phosphate 3 epimerase family D1092_RS03440 PF01613 Flavin reductase like domain D1092_RS03445 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1092_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS03455 PF08448 PAS fold D1092_RS03455 PF13188 PAS domain D1092_RS03455 PF00072 Response regulator receiver domain D1092_RS03455 PF00512 His Kinase A (phospho-acceptor) domain D1092_RS03460 PF00551 Formyl transferase D1092_RS03465 PF02769 AIR synthase related protein, C-terminal domain D1092_RS03465 PF00586 AIR synthase related protein, N-terminal domain D1092_RS03470 PF01594 AI-2E family transporter D1092_RS03495 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB D1092_RS03500 PF01381 Helix-turn-helix D1092_RS03550 PF02914 Bacteriophage Mu transposase D1092_RS03550 PF02316 Mu DNA-binding domain D1092_RS03550 PF09299 Mu transposase, C-terminal D1092_RS03550 PF09039 Mu DNA binding, I gamma subdomain D1092_RS03555 PF09077 Mu B transposition protein, C terminal D1092_RS03555 PF13401 AAA domain D1092_RS03585 PF00182 Chitinase class I D1092_RS03625 PF06074 Protein of unknown function (DUF935) D1092_RS03630 PF04233 Phage Mu protein F like protein D1092_RS03735 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB D1092_RS03740 PF01381 Helix-turn-helix D1092_RS03745 PF14659 Phage integrase, N-terminal SAM-like domain D1092_RS03745 PF00589 Phage integrase family D1092_RS03805 PF00436 Single-strand binding protein family D1092_RS03820 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system D1092_RS03900 PF07484 Phage Tail Collar Domain D1092_RS03965 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D1092_RS03970 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1092_RS03975 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D1092_RS03980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D1092_RS03990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1092_RS03990 PF10531 SLBB domain D1092_RS03990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D1092_RS03995 PF00384 Molybdopterin oxidoreductase D1092_RS03995 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D1092_RS03995 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D1092_RS04000 PF00146 NADH dehydrogenase D1092_RS04005 PF12838 4Fe-4S dicluster domain D1092_RS04010 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D1092_RS04015 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D1092_RS04020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D1092_RS04020 PF00361 Proton-conducting membrane transporter D1092_RS04025 PF00361 Proton-conducting membrane transporter D1092_RS04030 PF00361 Proton-conducting membrane transporter D1092_RS04035 PF08279 HTH domain D1092_RS04035 PF02237 Biotin protein ligase C terminal domain D1092_RS04035 PF03099 Biotin/lipoate A/B protein ligase family D1092_RS04040 PF17770 Ribonuclease J C-terminal domain D1092_RS04040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D1092_RS04040 PF12706 Beta-lactamase superfamily domain D1092_RS04045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1092_RS04045 PF03129 Anticodon binding domain D1092_RS04050 PF02687 FtsX-like permease family D1092_RS04050 PF12704 MacB-like periplasmic core domain D1092_RS04055 PF00005 ABC transporter D1092_RS04060 PF03937 Flavinator of succinate dehydrogenase D1092_RS04065 PF02559 CarD-like/TRCF domain D1092_RS04065 PF17757 UvrB interaction domain D1092_RS04065 PF03461 TRCF domain D1092_RS04065 PF00271 Helicase conserved C-terminal domain D1092_RS04065 PF00270 DEAD/DEAH box helicase D1092_RS04075 PF00575 S1 RNA binding domain D1092_RS04075 PF10150 Ribonuclease E/G family D1092_RS04075 PF12111 Polyribonucleotide phosphorylase C terminal D1092_RS04085 PF01520 N-acetylmuramoyl-L-alanine amidase D1092_RS04085 PF11741 AMIN domain D1092_RS04090 PF00905 Penicillin binding protein transpeptidase domain D1092_RS04090 PF00912 Transglycosylase D1092_RS04090 PF17092 Penicillin-binding protein OB-like domain D1092_RS04105 PF00578 AhpC/TSA family D1092_RS04110 PF00579 tRNA synthetases class I (W and Y) D1092_RS04110 PF01479 S4 domain D1092_RS04115 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D1092_RS04120 PF00266 Aminotransferase class-V D1092_RS04125 PF01458 Uncharacterized protein family (UPF0051) D1092_RS04130 PF00005 ABC transporter D1092_RS04135 PF01458 Uncharacterized protein family (UPF0051) D1092_RS04140 PF00266 Aminotransferase class-V D1092_RS04145 PF01883 Iron-sulfur cluster assembly protein D1092_RS04150 PF01555 DNA methylase D1092_RS04170 PF00080 Copper/zinc superoxide dismutase (SODC) D1092_RS04185 PF01494 FAD binding domain D1092_RS04190 PF01066 CDP-alcohol phosphatidyltransferase D1092_RS04210 PF03099 Biotin/lipoate A/B protein ligase family D1092_RS04210 PF12706 Beta-lactamase superfamily domain D1092_RS04215 PF01026 TatD related DNase D1092_RS04220 PF08264 Anticodon-binding domain of tRNA D1092_RS04220 PF09334 tRNA synthetases class I (M) D1092_RS04225 PF09115 DNA polymerase III, delta subunit, C terminal D1092_RS04230 PF02223 Thymidylate kinase D1092_RS04235 PF00768 D-alanyl-D-alanine carboxypeptidase D1092_RS04235 PF07943 Penicillin-binding protein 5, C-terminal domain D1092_RS04240 PF03330 Lytic transglycolase D1092_RS04240 PF05036 Sporulation related domain D1092_RS04250 PF01726 LexA DNA binding domain D1092_RS04250 PF00717 Peptidase S24-like D1092_RS04255 PF18693 TRAM domain D1092_RS04255 PF04055 Radical SAM superfamily D1092_RS04255 PF00919 Uncharacterized protein family UPF0004 D1092_RS04260 PF01171 PP-loop family D1092_RS04265 PF00163 Ribosomal protein S4/S9 N-terminal domain D1092_RS04265 PF01479 S4 domain D1092_RS04270 PF01177 Asp/Glu/Hydantoin racemase D1092_RS04275 PF00588 SpoU rRNA Methylase family D1092_RS04280 PF03749 Sugar fermentation stimulation protein RE domain D1092_RS04280 PF17746 SfsA N-terminal OB domain D1092_RS04285 PF00557 Metallopeptidase family M24 D1092_RS04290 PF04002 RadC-like JAB domain D1092_RS04300 PF00561 alpha/beta hydrolase fold D1092_RS04310 PF00313 'Cold-shock' DNA-binding domain D1092_RS04320 PF02653 Branched-chain amino acid transport system / permease component D1092_RS04325 PF11862 Domain of unknown function (DUF3382) D1092_RS04325 PF02653 Branched-chain amino acid transport system / permease component D1092_RS04330 PF00005 ABC transporter D1092_RS04330 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1092_RS04335 PF00005 ABC transporter D1092_RS04340 PF01425 Amidase D1092_RS04345 PF02686 Glu-tRNAGln amidotransferase C subunit D1092_RS04350 PF03652 Holliday junction resolvase D1092_RS04360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1092_RS04360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1092_RS04365 PF01979 Amidohydrolase family D1092_RS04370 PF02660 Glycerol-3-phosphate acyltransferase D1092_RS04375 PF17782 DprA winged helix domain D1092_RS04375 PF02481 DNA recombination-mediator protein A D1092_RS04385 PF01751 Toprim domain D1092_RS04385 PF01131 DNA topoisomerase D1092_RS04385 PF13368 Topoisomerase C-terminal repeat D1092_RS04385 PF01396 Topoisomerase DNA binding C4 zinc finger D1092_RS04390 PF08461 Ribonuclease R winged-helix domain D1092_RS04390 PF17876 Cold shock domain D1092_RS04390 PF00575 S1 RNA binding domain D1092_RS04390 PF00773 RNB domain D1092_RS04390 PF08206 Ribonuclease B OB domain D1092_RS04400 PF00471 Ribosomal protein L33 D1092_RS04410 PF03167 Uracil DNA glycosylase superfamily D1092_RS04415 PF13404 AsnC-type helix-turn-helix domain D1092_RS04415 PF01037 Lrp/AsnC ligand binding domain D1092_RS04420 PF02277 Phosphoribosyltransferase D1092_RS04425 PF01207 Dihydrouridine synthase (Dus) D1092_RS04435 PF01266 FAD dependent oxidoreductase D1092_RS04435 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D1092_RS04445 PF00364 Biotin-requiring enzyme D1092_RS04450 PF02785 Biotin carboxylase C-terminal domain D1092_RS04450 PF00289 Biotin carboxylase, N-terminal domain D1092_RS04450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1092_RS04515 PF01464 Transglycosylase SLT domain D1092_RS04515 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1092_RS04550 PF05973 Phage derived protein Gp49-like (DUF891) D1092_RS04555 PF01381 Helix-turn-helix D1092_RS04580 PF00589 Phage integrase family D1092_RS04580 PF13356 Arm DNA-binding domain D1092_RS04600 PF04851 Type III restriction enzyme, res subunit D1092_RS04600 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D1092_RS04600 PF00271 Helicase conserved C-terminal domain D1092_RS04600 PF08463 EcoEI R protein C-terminal D1092_RS04615 PF18836 Beta solenoid repeat from YDCK D1092_RS04645 PF00436 Single-strand binding protein family D1092_RS04650 PF18836 Beta solenoid repeat from YDCK D1092_RS04775 PF01227 GTP cyclohydrolase I D1092_RS04785 PF01809 Putative membrane protein insertion efficiency factor D1092_RS04790 PF03129 Anticodon binding domain D1092_RS04790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1092_RS04790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1092_RS04795 PF13411 MerR HTH family regulatory protein D1092_RS04800 PF00216 Bacterial DNA-binding protein D1092_RS04805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1092_RS04805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1092_RS04810 PF02504 Fatty acid synthesis protein D1092_RS04825 PF01029 NusB family D1092_RS04830 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1092_RS04835 PF00677 Lumazine binding domain D1092_RS04840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1092_RS04840 PF01872 RibD C-terminal domain D1092_RS04845 PF03477 ATP cone domain D1092_RS04850 PF00464 Serine hydroxymethyltransferase D1092_RS04855 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1092_RS04860 PF02628 Cytochrome oxidase assembly protein D1092_RS04870 PF16360 GTP-binding GTPase Middle Region D1092_RS04870 PF01926 50S ribosome-binding GTPase D1092_RS04870 PF13167 GTP-binding GTPase N-terminal D1092_RS04875 PF17209 Hfq protein D1092_RS04885 PF00390 Malic enzyme, N-terminal domain D1092_RS04885 PF03949 Malic enzyme, NAD binding domain D1092_RS04885 PF01515 Phosphate acetyl/butaryl transferase D1092_RS04890 PF00550 Phosphopantetheine attachment site D1092_RS04895 PF00109 Beta-ketoacyl synthase, N-terminal domain D1092_RS04895 PF02801 Beta-ketoacyl synthase, C-terminal domain D1092_RS04900 PF00109 Beta-ketoacyl synthase, N-terminal domain D1092_RS04900 PF02801 Beta-ketoacyl synthase, C-terminal domain D1092_RS04905 PF00107 Zinc-binding dehydrogenase D1092_RS04905 PF08240 Alcohol dehydrogenase GroES-like domain D1092_RS04915 PF03819 MazG nucleotide pyrophosphohydrolase domain D1092_RS04930 PF00011 Hsp20/alpha crystallin family D1092_RS04940 PF00072 Response regulator receiver domain D1092_RS04995 PF05594 Haemagluttinin repeat D1092_RS04995 PF04829 Pre-toxin domain with VENN motif D1092_RS04995 PF15526 Novel toxin 21 D1092_RS04995 PF13332 Hemagglutinin repeat D1092_RS04995 PF05860 haemagglutination activity domain D1092_RS05010 PF00324 Amino acid permease D1092_RS05020 PF00221 Aromatic amino acid lyase D1092_RS05035 PF04536 TPM domain D1092_RS05040 PF03099 Biotin/lipoate A/B protein ligase family D1092_RS05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS05045 PF00986 DNA gyrase B subunit, carboxyl terminus D1092_RS05045 PF00204 DNA gyrase B D1092_RS05045 PF01751 Toprim domain D1092_RS05050 PF01368 DHH family D1092_RS05050 PF02272 DHHA1 domain D1092_RS05050 PF17768 RecJ OB domain D1092_RS05055 PF00572 Ribosomal protein L13 D1092_RS05060 PF00380 Ribosomal protein S9/S16 D1092_RS05065 PF00072 Response regulator receiver domain D1092_RS05090 PF00849 RNA pseudouridylate synthase D1092_RS05090 PF01479 S4 domain D1092_RS05095 PF00664 ABC transporter transmembrane region D1092_RS05095 PF00005 ABC transporter D1092_RS05100 PF02272 DHHA1 domain D1092_RS05100 PF01411 tRNA synthetases class II (A) D1092_RS05100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1092_RS05105 PF00154 recA bacterial DNA recombination protein D1092_RS05115 PF12002 MgsA AAA+ ATPase C terminal D1092_RS05115 PF16193 AAA C-terminal domain D1092_RS05115 PF00004 ATPase family associated with various cellular activities (AAA) D1092_RS05120 PF17820 PDZ domain D1092_RS05120 PF13180 PDZ domain D1092_RS05125 PF01196 Ribosomal protein L17 D1092_RS05130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1092_RS05130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1092_RS05130 PF01000 RNA polymerase Rpb3/RpoA insert domain D1092_RS05135 PF00411 Ribosomal protein S11 D1092_RS05140 PF00416 Ribosomal protein S13/S18 D1092_RS05150 PF00344 SecY translocase D1092_RS05155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1092_RS05160 PF00327 Ribosomal protein L30p/L7e D1092_RS05165 PF00333 Ribosomal protein S5, N-terminal domain D1092_RS05165 PF03719 Ribosomal protein S5, C-terminal domain D1092_RS05170 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1092_RS05175 PF00347 Ribosomal protein L6 D1092_RS05180 PF00410 Ribosomal protein S8 D1092_RS05185 PF00253 Ribosomal protein S14p/S29e D1092_RS05190 PF00673 ribosomal L5P family C-terminus D1092_RS05190 PF00281 Ribosomal protein L5 D1092_RS05195 PF00467 KOW motif D1092_RS05195 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1092_RS05200 PF00238 Ribosomal protein L14p/L23e D1092_RS05205 PF00366 Ribosomal protein S17 D1092_RS05210 PF00831 Ribosomal L29 protein D1092_RS05215 PF00252 Ribosomal protein L16p/L10e D1092_RS05220 PF00189 Ribosomal protein S3, C-terminal domain D1092_RS05220 PF07650 KH domain D1092_RS05225 PF00237 Ribosomal protein L22p/L17e D1092_RS05230 PF00203 Ribosomal protein S19 D1092_RS05235 PF00181 Ribosomal Proteins L2, RNA binding domain D1092_RS05235 PF03947 Ribosomal Proteins L2, C-terminal domain D1092_RS05240 PF00276 Ribosomal protein L23 D1092_RS05245 PF00573 Ribosomal protein L4/L1 family D1092_RS05250 PF00297 Ribosomal protein L3 D1092_RS05255 PF00338 Ribosomal protein S10p/S20e D1092_RS05260 PF03143 Elongation factor Tu C-terminal domain D1092_RS05260 PF03144 Elongation factor Tu domain 2 D1092_RS05260 PF00009 Elongation factor Tu GTP binding domain D1092_RS05265 PF03144 Elongation factor Tu domain 2 D1092_RS05265 PF00679 Elongation factor G C-terminus D1092_RS05265 PF14492 Elongation Factor G, domain II D1092_RS05265 PF03764 Elongation factor G, domain IV D1092_RS05265 PF00009 Elongation factor Tu GTP binding domain D1092_RS05270 PF00177 Ribosomal protein S7p/S5e D1092_RS05275 PF00164 Ribosomal protein S12/S23 D1092_RS05285 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1092_RS05290 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS05300 PF00005 ABC transporter D1092_RS05315 PF10458 Valyl tRNA synthetase tRNA binding arm D1092_RS05315 PF00133 tRNA synthetases class I (I, L, M and V) D1092_RS05315 PF08264 Anticodon-binding domain of tRNA D1092_RS05325 PF02321 Outer membrane efflux protein D1092_RS05345 PF00270 DEAD/DEAH box helicase D1092_RS05345 PF00271 Helicase conserved C-terminal domain D1092_RS05355 PF00585 C-terminal regulatory domain of Threonine dehydratase D1092_RS05355 PF00291 Pyridoxal-phosphate dependent enzyme D1092_RS05365 PF13505 Outer membrane protein beta-barrel domain D1092_RS05375 PF00924 Mechanosensitive ion channel D1092_RS05375 PF12795 Mechanosensitive ion channel porin domain D1092_RS05375 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1092_RS05385 PF02355 Protein export membrane protein D1092_RS05385 PF07549 SecD/SecF GG Motif D1092_RS05390 PF02254 TrkA-N domain D1092_RS05390 PF00999 Sodium/hydrogen exchanger family D1092_RS05395 PF09924 Uncharacterised conserved protein (DUF2156) D1092_RS05395 PF03706 Lysylphosphatidylglycerol synthase TM region D1092_RS05405 PF03471 Transporter associated domain D1092_RS05405 PF03741 Integral membrane protein TerC family D1092_RS05420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1092_RS05420 PF01842 ACT domain D1092_RS05420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1092_RS05425 PF01557 Fumarylacetoacetate (FAA) hydrolase family D1092_RS05430 PF01810 LysE type translocator D1092_RS05435 PF00324 Amino acid permease D1092_RS05440 PF00324 Amino acid permease D1092_RS05445 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1092_RS05445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1092_RS05450 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D1092_RS05455 PF13538 UvrD-like helicase C-terminal domain D1092_RS05455 PF14490 Helix-hairpin-helix containing domain D1092_RS05455 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D1092_RS05460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1092_RS05460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1092_RS05475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1092_RS05475 PF00205 Thiamine pyrophosphate enzyme, central domain D1092_RS05475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1092_RS05485 PF17820 PDZ domain D1092_RS05485 PF13180 PDZ domain D1092_RS05490 PF01145 SPFH domain / Band 7 family D1092_RS05500 PF00186 Dihydrofolate reductase D1092_RS05505 PF00303 Thymidylate synthase D1092_RS05510 PF00083 Sugar (and other) transporter D1092_RS05515 PF00083 Sugar (and other) transporter D1092_RS05520 PF00083 Sugar (and other) transporter D1092_RS05525 PF00083 Sugar (and other) transporter D1092_RS05555 PF13361 UvrD-like helicase C-terminal domain D1092_RS05555 PF00580 UvrD/REP helicase N-terminal domain D1092_RS05560 PF00132 Bacterial transferase hexapeptide (six repeats) D1092_RS05565 PF02630 SCO1/SenC D1092_RS05575 PF01321 Creatinase/Prolidase N-terminal domain D1092_RS05575 PF00557 Metallopeptidase family M24 D1092_RS05580 PF01653 NAD-dependent DNA ligase adenylation domain D1092_RS05580 PF03120 NAD-dependent DNA ligase OB-fold domain D1092_RS05580 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1092_RS05580 PF12826 Helix-hairpin-helix motif D1092_RS05580 PF00533 BRCA1 C Terminus (BRCT) domain D1092_RS05585 PF02463 RecF/RecN/SMC N terminal domain D1092_RS05590 PF13525 Outer membrane lipoprotein D1092_RS05595 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1092_RS05600 PF12327 FtsZ family, C-terminal domain D1092_RS05600 PF00091 Tubulin/FtsZ family, GTPase domain D1092_RS05605 PF02491 SHS2 domain inserted in FTSA D1092_RS05610 PF08478 POTRA domain, FtsQ-type D1092_RS05610 PF03799 Cell division protein FtsQ D1092_RS05615 PF01820 D-ala D-ala ligase N-terminus D1092_RS05615 PF07478 D-ala D-ala ligase C-terminus D1092_RS05620 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1092_RS05620 PF01565 FAD binding domain D1092_RS05625 PF01225 Mur ligase family, catalytic domain D1092_RS05625 PF08245 Mur ligase middle domain D1092_RS05625 PF02875 Mur ligase family, glutamate ligase domain D1092_RS05630 PF03033 Glycosyltransferase family 28 N-terminal domain D1092_RS05630 PF04101 Glycosyltransferase family 28 C-terminal domain D1092_RS05635 PF01098 Cell cycle protein D1092_RS05640 PF08245 Mur ligase middle domain D1092_RS05645 PF00953 Glycosyl transferase family 4 D1092_RS05645 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D1092_RS05650 PF02875 Mur ligase family, glutamate ligase domain D1092_RS05650 PF01225 Mur ligase family, catalytic domain D1092_RS05650 PF08245 Mur ligase middle domain D1092_RS05655 PF02875 Mur ligase family, glutamate ligase domain D1092_RS05655 PF08245 Mur ligase middle domain D1092_RS05655 PF01225 Mur ligase family, catalytic domain D1092_RS05660 PF03717 Penicillin-binding Protein dimerisation domain D1092_RS05660 PF00905 Penicillin binding protein transpeptidase domain D1092_RS05670 PF01795 MraW methylase family D1092_RS05695 PF01209 ubiE/COQ5 methyltransferase family D1092_RS05700 PF12848 ABC transporter D1092_RS05700 PF00005 ABC transporter D1092_RS05710 PF00857 Isochorismatase family D1092_RS05750 PF04402 Protein of unknown function (DUF541) D1092_RS05755 PF03692 Putative zinc- or iron-chelating domain D1092_RS05760 PF00140 Sigma-70 factor, region 1.2 D1092_RS05760 PF04545 Sigma-70, region 4 D1092_RS05760 PF04539 Sigma-70 region 3 D1092_RS05760 PF04542 Sigma-70 region 2 D1092_RS05760 PF04546 Sigma-70, non-essential region D1092_RS05760 PF03979 Sigma-70 factor, region 1.1 D1092_RS05765 PF10410 DnaB-helicase binding domain of primase D1092_RS05765 PF01807 CHC2 zinc finger D1092_RS05765 PF08275 DNA primase catalytic core, N-terminal domain D1092_RS05765 PF08278 DNA primase DnaG DnaB-binding D1092_RS05770 PF00924 Mechanosensitive ion channel D1092_RS05775 PF02690 Na+/Pi-cotransporter D1092_RS05785 PF04345 Chorismate lyase D1092_RS05795 PF00117 Glutamine amidotransferase class-I D1092_RS05795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D1092_RS05810 PF01545 Cation efflux family D1092_RS05810 PF16916 Dimerisation domain of Zinc Transporter D1092_RS05820 PF00588 SpoU rRNA Methylase family D1092_RS05840 PF00072 Response regulator receiver domain D1092_RS05840 PF00486 Transcriptional regulatory protein, C terminal D1092_RS05845 PF10090 Histidine phosphotransferase C-terminal domain D1092_RS05865 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D1092_RS05870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D1092_RS05870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D1092_RS05915 PF03797 Autotransporter beta-domain D1092_RS05915 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat D1092_RS05915 PF12951 Passenger-associated-transport-repeat D1092_RS05950 PF13614 AAA domain D1092_RS05965 PF01687 Riboflavin kinase D1092_RS05965 PF06574 FAD synthetase D1092_RS05975 PF01381 Helix-turn-helix D1092_RS05985 PF04956 TrbC/VIRB2 family D1092_RS05990 PF05101 Type IV secretory pathway, VirB3-like protein D1092_RS05995 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D1092_RS06005 PF04610 TrbL/VirB6 plasmid conjugal transfer protein D1092_RS06015 PF04335 VirB8 protein D1092_RS06020 PF03524 Conjugal transfer protein D1092_RS06025 PF03743 Bacterial conjugation TrbI-like protein D1092_RS06030 PF00437 Type II/IV secretion system protein D1092_RS06040 PF18543 Intracellular delivery domain D1092_RS06040 PF02661 Fic/DOC family D1092_RS06045 PF02534 Type IV secretory system Conjugative DNA transfer D1092_RS06050 PF18543 Intracellular delivery domain D1092_RS06050 PF02661 Fic/DOC family D1092_RS06075 PF18543 Intracellular delivery domain D1092_RS06075 PF02661 Fic/DOC family D1092_RS06080 PF03023 Lipid II flippase MurJ D1092_RS06085 PF00579 tRNA synthetases class I (W and Y) D1092_RS06095 PF01106 NifU-like domain D1092_RS06100 PF03831 PhnA domain D1092_RS06100 PF08274 PhnA Zinc-Ribbon D1092_RS06110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1092_RS06110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1092_RS06110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1092_RS06110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1092_RS06115 PF08534 Redoxin D1092_RS06120 PF03129 Anticodon binding domain D1092_RS06120 PF13393 Histidyl-tRNA synthetase D1092_RS06130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1092_RS06175 PF01475 Ferric uptake regulator family D1092_RS06180 PF13533 Biotin-lipoyl like D1092_RS06185 PF07690 Major Facilitator Superfamily D1092_RS06195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1092_RS06195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1092_RS06200 PF17773 UPF0176 acylphosphatase like domain D1092_RS06200 PF00581 Rhodanese-like domain D1092_RS06205 PF01081 KDPG and KHG aldolase D1092_RS06215 PF00175 Oxidoreductase NAD-binding domain D1092_RS06215 PF00970 Oxidoreductase FAD-binding domain D1092_RS06220 PF00842 Alanine racemase, C-terminal domain D1092_RS06220 PF01168 Alanine racemase, N-terminal domain D1092_RS06225 PF02347 Glycine cleavage system P-protein D1092_RS06230 PF01597 Glycine cleavage H-protein D1092_RS06235 PF01571 Aminomethyltransferase folate-binding domain D1092_RS06235 PF08669 Glycine cleavage T-protein C-terminal barrel domain D1092_RS06245 PF03966 Trm112p-like protein D1092_RS06250 PF01381 Helix-turn-helix D1092_RS06255 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1092_RS06255 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1092_RS06265 PF03180 NLPA lipoprotein D1092_RS06270 PF09383 NIL domain D1092_RS06270 PF00005 ABC transporter D1092_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS06285 PF01575 MaoC like domain D1092_RS06320 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1092_RS06320 PF07683 Cobalamin synthesis protein cobW C-terminal domain D1092_RS06365 PF01497 Periplasmic binding protein D1092_RS06370 PF01032 FecCD transport family D1092_RS06375 PF01032 FecCD transport family D1092_RS06380 PF00005 ABC transporter D1092_RS06410 PF00005 ABC transporter D1092_RS06410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1092_RS06415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1092_RS06415 PF00005 ABC transporter D1092_RS06420 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS06420 PF12911 N-terminal TM domain of oligopeptide transport permease C D1092_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component D1092_RS06430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1092_RS06435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1092_RS06440 PF03352 Methyladenine glycosylase D1092_RS06445 PF13742 OB-fold nucleic acid binding domain D1092_RS06445 PF02601 Exonuclease VII, large subunit D1092_RS06450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1092_RS06455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1092_RS06465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1092_RS06480 PF01925 Sulfite exporter TauE/SafE D1092_RS06490 PF01012 Electron transfer flavoprotein domain D1092_RS06495 PF00766 Electron transfer flavoprotein FAD-binding domain D1092_RS06495 PF01012 Electron transfer flavoprotein domain D1092_RS06505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1092_RS06510 PF02021 Uncharacterised protein family UPF0102 D1092_RS06525 PF10609 NUBPL iron-transfer P-loop NTPase D1092_RS06525 PF01883 Iron-sulfur cluster assembly protein D1092_RS06530 PF00468 Ribosomal protein L34 D1092_RS06535 PF00825 Ribonuclease P D1092_RS06540 PF14849 YidC periplasmic domain D1092_RS06540 PF02096 60Kd inner membrane protein D1092_RS06545 PF01926 50S ribosome-binding GTPase D1092_RS06550 PF13417 Glutathione S-transferase, N-terminal domain D1092_RS06550 PF00043 Glutathione S-transferase, C-terminal domain D1092_RS06560 PF01113 Dihydrodipicolinate reductase, N-terminus D1092_RS06560 PF05173 Dihydrodipicolinate reductase, C-terminus D1092_RS06565 PF00300 Histidine phosphatase superfamily (branch 1) D1092_RS06605 PF02530 Porin subfamily D1092_RS06610 PF01510 N-acetylmuramoyl-L-alanine amidase D1092_RS06620 PF07690 Major Facilitator Superfamily D1092_RS06660 PF00155 Aminotransferase class I and II D1092_RS06680 PF07690 Major Facilitator Superfamily D1092_RS06685 PF18273 Type III R-M EcoP15I C-terminal domain D1092_RS06685 PF01555 DNA methylase D1092_RS06690 PF01555 DNA methylase D1092_RS06690 PF18273 Type III R-M EcoP15I C-terminal domain D1092_RS06700 PF01555 DNA methylase D1092_RS06700 PF18273 Type III R-M EcoP15I C-terminal domain D1092_RS06705 PF04851 Type III restriction enzyme, res subunit D1092_RS06705 PF08774 VRR-NUC domain D1092_RS06760 PF13426 PAS domain D1092_RS06760 PF07568 Histidine kinase D1092_RS06760 PF13581 Histidine kinase-like ATPase domain D1092_RS06765 PF04542 Sigma-70 region 2 D1092_RS06765 PF08281 Sigma-70, region 4 D1092_RS06775 PF00072 Response regulator receiver domain D1092_RS06780 PF13426 PAS domain D1092_RS06780 PF08447 PAS fold D1092_RS06780 PF07536 HWE histidine kinase D1092_RS06880 PF01381 Helix-turn-helix D1092_RS06885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1092_RS06890 PF01381 Helix-turn-helix D1092_RS06895 PF01381 Helix-turn-helix D1092_RS06920 PF10431 C-terminal, D2-small domain, of ClpB protein D1092_RS06920 PF02861 Clp amino terminal domain, pathogenicity island component D1092_RS06920 PF00004 ATPase family associated with various cellular activities (AAA) D1092_RS06920 PF17871 AAA lid domain D1092_RS06920 PF07724 AAA domain (Cdc48 subfamily) D1092_RS06970 PF03884 DNA gyrase inhibitor YacG D1092_RS06975 PF02545 Maf-like protein D1092_RS06980 PF01176 Translation initiation factor 1A / IF-1 D1092_RS06985 PF02600 Disulfide bond formation protein DsbB D1092_RS06990 PF00731 AIR carboxylase D1092_RS07000 PF02222 ATP-grasp domain D1092_RS07000 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1092_RS07010 PF00444 Ribosomal protein L36 D1092_RS07035 PF13277 YmdB-like protein D1092_RS07045 PF00180 Isocitrate/isopropylmalate dehydrogenase D1092_RS07045 PF03737 Aldolase/RraA D1092_RS07055 PF01381 Helix-turn-helix D1092_RS07070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1092_RS07260 PF03421 YopJ Serine/Threonine acetyltransferase D1092_RS07305 PF00118 TCP-1/cpn60 chaperonin family D1092_RS07310 PF00166 Chaperonin 10 Kd subunit D1092_RS07315 PF10415 Fumarase C C-terminus D1092_RS07315 PF00206 Lyase D1092_RS07320 PF10415 Fumarase C C-terminus D1092_RS07320 PF00206 Lyase D1092_RS07330 PF13505 Outer membrane protein beta-barrel domain D1092_RS07340 PF09335 SNARE associated Golgi protein D1092_RS07370 PF00692 dUTPase D1092_RS07375 PF02472 Biopolymer transport protein ExbD/TolR D1092_RS07380 PF01618 MotA/TolQ/ExbB proton channel family D1092_RS07410 PF05101 Type IV secretory pathway, VirB3-like protein D1092_RS07415 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D1092_RS07475 PF04610 TrbL/VirB6 plasmid conjugal transfer protein D1092_RS07485 PF04335 VirB8 protein D1092_RS07490 PF03524 Conjugal transfer protein D1092_RS07495 PF03743 Bacterial conjugation TrbI-like protein D1092_RS07500 PF00437 Type II/IV secretion system protein D1092_RS07520 PF17841 BID domain of Bartonella effector protein (Bep) D1092_RS07520 PF02661 Fic/DOC family D1092_RS07525 PF18495 Antitoxin VbhA D1092_RS07530 PF01381 Helix-turn-helix D1092_RS07540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1092_RS07540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1092_RS07540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1092_RS07540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1092_RS07545 PF00004 ATPase family associated with various cellular activities (AAA) D1092_RS07545 PF17862 AAA+ lid domain D1092_RS07545 PF06480 FtsH Extracellular D1092_RS07545 PF01434 Peptidase family M41 D1092_RS07550 PF01171 PP-loop family D1092_RS07560 PF00691 OmpA family D1092_RS07570 PF01709 Transcriptional regulator D1092_RS07575 PF04052 TolB amino-terminal domain D1092_RS07575 PF07676 WD40-like Beta Propeller Repeat D1092_RS07585 PF02472 Biopolymer transport protein ExbD/TolR D1092_RS07590 PF01618 MotA/TolQ/ExbB proton channel family D1092_RS07595 PF01381 Helix-turn-helix D1092_RS07600 PF03061 Thioesterase superfamily D1092_RS07605 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1092_RS07605 PF05491 RuvB C-terminal winged helix domain D1092_RS07605 PF17864 RuvB AAA lid domain D1092_RS07610 PF07499 RuvA, C-terminal domain D1092_RS07610 PF01330 RuvA N terminal domain D1092_RS07615 PF02075 Crossover junction endodeoxyribonuclease RuvC D1092_RS07645 PF01381 Helix-turn-helix D1092_RS07665 PF01381 Helix-turn-helix D1092_RS07690 PF01381 Helix-turn-helix D1092_RS07695 PF09285 Elongation factor P, C-terminal D1092_RS07695 PF01132 Elongation factor P (EF-P) OB domain D1092_RS07695 PF08207 Elongation factor P (EF-P) KOW-like domain D1092_RS07700 PF00459 Inositol monophosphatase family D1092_RS07710 PF00005 ABC transporter D1092_RS07710 PF00664 ABC transporter transmembrane region D1092_RS07715 PF01197 Ribosomal protein L31 D1092_RS07735 PF00274 Fructose-bisphosphate aldolase class-I D1092_RS07740 PF00162 Phosphoglycerate kinase D1092_RS07745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1092_RS07745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1092_RS07750 PF00456 Transketolase, thiamine diphosphate binding domain D1092_RS07750 PF02780 Transketolase, C-terminal domain D1092_RS07750 PF02779 Transketolase, pyrimidine binding domain D1092_RS07765 PF00224 Pyruvate kinase, barrel domain D1092_RS07765 PF02887 Pyruvate kinase, alpha/beta domain D1092_RS07775 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) D1092_RS07780 PF13302 Acetyltransferase (GNAT) domain D1092_RS07785 PF00005 ABC transporter D1092_RS07785 PF16326 ABC transporter C-terminal domain D1092_RS07800 PF13181 Tetratricopeptide repeat D1092_RS07800 PF01435 Peptidase family M48 D1092_RS07805 PF00140 Sigma-70 factor, region 1.2 D1092_RS07805 PF04542 Sigma-70 region 2 D1092_RS07805 PF04545 Sigma-70, region 4 D1092_RS07815 PF11953 Domain of unknown function (DUF3470) D1092_RS07815 PF00037 4Fe-4S binding domain D1092_RS07825 PF01783 Ribosomal L32p protein family D1092_RS07830 PF00348 Polyprenyl synthetase D1092_RS07840 PF04551 GcpE protein D1092_RS07860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1092_RS07860 PF00529 HlyD membrane-fusion protein of T1SS D1092_RS07870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1092_RS07875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1092_RS07875 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1092_RS07880 PF00231 ATP synthase D1092_RS07885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1092_RS07885 PF00306 ATP synthase alpha/beta chain, C terminal domain D1092_RS07885 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1092_RS07890 PF00213 ATP synthase delta (OSCP) subunit D1092_RS07905 PF18074 Primosomal protein N C-terminal domain D1092_RS07905 PF17764 3′ DNA-binding domain (3′BD) D1092_RS07905 PF00270 DEAD/DEAH box helicase D1092_RS07905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1092_RS07910 PF00923 Transaldolase/Fructose-6-phosphate aldolase D1092_RS07920 PF08264 Anticodon-binding domain of tRNA D1092_RS07920 PF13603 Leucyl-tRNA synthetase, Domain 2 D1092_RS07920 PF00133 tRNA synthetases class I (I, L, M and V) D1092_RS07925 PF01168 Alanine racemase, N-terminal domain D1092_RS07930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1092_RS07930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1092_RS07935 PF00501 AMP-binding enzyme D1092_RS07935 PF16177 Acetyl-coenzyme A synthetase N-terminus D1092_RS07935 PF13193 AMP-binding enzyme C-terminal domain D1092_RS07940 PF00005 ABC transporter D1092_RS07960 PF01494 FAD binding domain D1092_RS07965 PF17854 FtsK alpha domain D1092_RS07965 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1092_RS07965 PF01580 FtsK/SpoIIIE family D1092_RS07965 PF09397 Ftsk gamma domain D1092_RS07980 PF02321 Outer membrane efflux protein D1092_RS07985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1092_RS07990 PF12704 MacB-like periplasmic core domain D1092_RS07990 PF02687 FtsX-like permease family D1092_RS07990 PF00005 ABC transporter D1092_RS08060 PF05101 Type IV secretory pathway, VirB3-like protein D1092_RS08065 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D1092_RS08160 PF04610 TrbL/VirB6 plasmid conjugal transfer protein D1092_RS08170 PF04335 VirB8 protein D1092_RS08175 PF03524 Conjugal transfer protein D1092_RS08180 PF03743 Bacterial conjugation TrbI-like protein D1092_RS08185 PF00437 Type II/IV secretion system protein D1092_RS08190 PF13237 4Fe-4S dicluster domain D1092_RS08190 PF13085 2Fe-2S iron-sulfur cluster binding domain D1092_RS08195 PF02910 Fumarate reductase flavoprotein C-term D1092_RS08195 PF00890 FAD binding domain D1092_RS08210 PF01245 Ribosomal protein L19 D1092_RS08215 PF01746 tRNA (Guanine-1)-methyltransferase D1092_RS08220 PF01782 RimM N-terminal domain D1092_RS08220 PF05239 PRC-barrel domain D1092_RS08230 PF02899 Phage integrase, N-terminal SAM-like domain D1092_RS08230 PF00589 Phage integrase family D1092_RS08235 PF01722 BolA-like protein D1092_RS08240 PF00226 DnaJ domain D1092_RS08245 PF07728 AAA domain (dynein-related subfamily) D1092_RS08245 PF08406 CbbQ/NirQ/NorQ C-terminal D1092_RS08245 PF12556 Cobaltochelatase CobS subunit N terminal D1092_RS08250 PF06213 Cobalamin biosynthesis protein CobT D1092_RS08250 PF11775 Cobalamin biosynthesis protein CobT VWA domain D1092_RS08255 PF09556 HaeIII restriction endonuclease D1092_RS08260 PF09556 HaeIII restriction endonuclease D1092_RS08300 PF00830 Ribosomal L28 family D1092_RS08310 PF01808 AICARFT/IMPCHase bienzyme D1092_RS08310 PF02142 MGS-like domain D1092_RS08325 PF01029 NusB family D1092_RS08325 PF01189 16S rRNA methyltransferase RsmB/F D1092_RS08330 PF01435 Peptidase family M48 D1092_RS08340 PF00886 Ribosomal protein S16 D1092_RS08350 PF02881 SRP54-type protein, helical bundle domain D1092_RS08350 PF02978 Signal peptide binding domain D1092_RS08350 PF00448 SRP54-type protein, GTPase domain D1092_RS08355 PF00484 Carbonic anhydrase D1092_RS08360 PF05088 Bacterial NAD-glutamate dehydrogenase D1092_RS08375 PF00117 Glutamine amidotransferase class-I D1092_RS08390 PF00814 Glycoprotease family D1092_RS08400 PF00486 Transcriptional regulatory protein, C terminal D1092_RS08400 PF00072 Response regulator receiver domain D1092_RS08415 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1092_RS08415 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1092_RS08425 PF14698 Argininosuccinate lyase C-terminal D1092_RS08425 PF00206 Lyase D1092_RS08430 PF11412 Disulphide bond corrector protein DsbC D1092_RS08430 PF02683 Cytochrome C biogenesis protein transmembrane region D1092_RS08435 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D1092_RS08445 PF02153 Prephenate dehydrogenase D1092_RS08455 PF00005 ABC transporter D1092_RS08485 PF08543 Phosphomethylpyrimidine kinase D1092_RS08495 PF07943 Penicillin-binding protein 5, C-terminal domain D1092_RS08495 PF00768 D-alanyl-D-alanine carboxypeptidase D1092_RS08500 PF07683 Cobalamin synthesis protein cobW C-terminal domain D1092_RS08500 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1092_RS08505 PF03734 L,D-transpeptidase catalytic domain D1092_RS08510 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1092_RS08515 PF02899 Phage integrase, N-terminal SAM-like domain D1092_RS08515 PF00589 Phage integrase family D1092_RS08520 PF01202 Shikimate kinase D1092_RS08525 PF01761 3-dehydroquinate synthase D1092_RS08535 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme D1092_RS08540 PF03334 Na+/H+ antiporter subunit D1092_RS08545 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D1092_RS08550 PF01899 Na+/H+ ion antiporter subunit D1092_RS08555 PF00361 Proton-conducting membrane transporter D1092_RS08560 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D1092_RS08565 PF00361 Proton-conducting membrane transporter D1092_RS08565 PF13244 Domain of unknown function (DUF4040) D1092_RS08565 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D1092_RS08565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D1092_RS08575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1092_RS08580 PF16653 Saccharopine dehydrogenase C-terminal domain D1092_RS08580 PF03435 Saccharopine dehydrogenase NADP binding domain D1092_RS08585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1092_RS08585 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1092_RS08590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1092_RS08590 PF00364 Biotin-requiring enzyme D1092_RS08590 PF02817 e3 binding domain D1092_RS08595 PF02779 Transketolase, pyrimidine binding domain D1092_RS08595 PF00676 Dehydrogenase E1 component D1092_RS08595 PF16870 2-oxoglutarate dehydrogenase C-terminal D1092_RS08595 PF16078 2-oxoglutarate dehydrogenase N-terminus D1092_RS08600 PF02629 CoA binding domain D1092_RS08600 PF00549 CoA-ligase D1092_RS08605 PF00549 CoA-ligase D1092_RS08605 PF08442 ATP-grasp domain D1092_RS08610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1092_RS08610 PF00056 lactate/malate dehydrogenase, NAD binding domain D1092_RS08615 PF03969 AFG1-like ATPase D1092_RS08620 PF02974 Protease inhibitor Inh D1092_RS08625 PF01678 Diaminopimelate epimerase D1092_RS08630 PF00919 Uncharacterized protein family UPF0004 D1092_RS08630 PF04055 Radical SAM superfamily D1092_RS08635 PF00448 SRP54-type protein, GTPase domain D1092_RS08635 PF02881 SRP54-type protein, helical bundle domain D1092_RS08640 PF04279 Intracellular septation protein A D1092_RS08645 PF00753 Metallo-beta-lactamase superfamily D1092_RS08645 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1092_RS08655 PF02195 ParB-like nuclease domain D1092_RS08655 PF17762 HTH domain found in ParB protein D1092_RS08660 PF13614 AAA domain D1092_RS08665 PF02527 rRNA small subunit methyltransferase G D1092_RS08670 PF13932 GidA associated domain D1092_RS08670 PF01134 Glucose inhibited division protein A D1092_RS08675 PF01926 50S ribosome-binding GTPase D1092_RS08675 PF12631 MnmE helical domain D1092_RS08675 PF10396 GTP-binding protein TrmE N-terminus D1092_RS08680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1092_RS08680 PF07497 Rho termination factor, RNA-binding domain D1092_RS08680 PF07498 Rho termination factor, N-terminal domain D1092_RS08685 PF03618 Kinase/pyrophosphorylase D1092_RS08690 PF02545 Maf-like protein D1092_RS08695 PF08501 Shikimate dehydrogenase substrate binding domain D1092_RS08695 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1092_RS08695 PF01488 Shikimate / quinate 5-dehydrogenase D1092_RS08700 PF01121 Dephospho-CoA kinase D1092_RS08705 PF00929 Exonuclease D1092_RS08710 PF00476 DNA polymerase family A D1092_RS08710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1092_RS08710 PF01367 5'-3' exonuclease, C-terminal SAM fold D1092_RS08710 PF01612 3'-5' exonuclease D1092_RS08720 PF01027 Inhibitor of apoptosis-promoting Bax1 D1092_RS08725 PF01252 Signal peptidase (SPase) II D1092_RS08730 PF00588 SpoU rRNA Methylase family D1092_RS08735 PF02926 THUMP domain D1092_RS08735 PF10672 S-adenosylmethionine-dependent methyltransferase D1092_RS08735 PF01170 Putative RNA methylase family UPF0020 D1092_RS08745 PF00216 Bacterial DNA-binding protein D1092_RS08760 PF00005 ABC transporter D1092_RS08765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1092_RS08775 PF04055 Radical SAM superfamily D1092_RS08785 PF00764 Arginosuccinate synthase D1092_RS08790 PF01921 tRNA synthetases class I (K) D1092_RS08795 PF00009 Elongation factor Tu GTP binding domain D1092_RS08795 PF03144 Elongation factor Tu domain 2 D1092_RS08795 PF16658 Class II release factor RF3, C-terminal domain D1092_RS08800 PF12705 PD-(D/E)XK nuclease superfamily D1092_RS08805 PF00580 UvrD/REP helicase N-terminal domain D1092_RS08805 PF13361 UvrD-like helicase C-terminal domain D1092_RS08805 PF12705 PD-(D/E)XK nuclease superfamily D1092_RS08810 PF00085 Thioredoxin D1092_RS08815 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1092_RS08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS08820 PF00512 His Kinase A (phospho-acceptor) domain D1092_RS08825 PF05221 S-adenosyl-L-homocysteine hydrolase D1092_RS08825 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D1092_RS08830 PF13460 NAD(P)H-binding D1092_RS08830 PF11066 Protein of unknown function (DUF2867) D1092_RS08835 PF08245 Mur ligase middle domain D1092_RS08840 PF01039 Carboxyl transferase domain D1092_RS08850 PF04127 DNA / pantothenate metabolism flavoprotein D1092_RS08850 PF02441 Flavoprotein D1092_RS08855 PF03109 ABC1 family D1092_RS08860 PF01209 ubiE/COQ5 methyltransferase family D1092_RS08865 PF01751 Toprim domain D1092_RS08865 PF00204 DNA gyrase B D1092_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS08865 PF00986 DNA gyrase B subunit, carboxyl terminus D1092_RS08870 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1092_RS08875 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1092_RS08875 PF01078 Magnesium chelatase, subunit ChlI D1092_RS08880 PF17243 POTRA domain TamA domain 1 D1092_RS08880 PF07244 Surface antigen variable number repeat D1092_RS08880 PF01103 Surface antigen D1092_RS08890 PF00664 ABC transporter transmembrane region D1092_RS08890 PF00005 ABC transporter D1092_RS08895 PF05198 Translation initiation factor IF-3, N-terminal domain D1092_RS08895 PF00707 Translation initiation factor IF-3, C-terminal domain D1092_RS08910 PF01546 Peptidase family M20/M25/M40 D1092_RS08910 PF07687 Peptidase dimerisation domain D1092_RS08915 PF04055 Radical SAM superfamily D1092_RS08915 PF06969 HemN C-terminal domain D1092_RS08920 PF01725 Ham1 family D1092_RS08925 PF01628 HrcA protein C terminal domain D1092_RS08925 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D1092_RS08930 PF01025 GrpE D1092_RS08940 PF00381 PTS HPr component phosphorylation site D1092_RS08945 PF03610 PTS system fructose IIA component D1092_RS08945 PF03830 PTS system sorbose subfamily IIB component D1092_RS08955 PF00512 His Kinase A (phospho-acceptor) domain D1092_RS08955 PF00672 HAMP domain D1092_RS08955 PF13756 Stimulus-sensing domain D1092_RS08955 PF13755 Sensor N-terminal transmembrane domain D1092_RS08955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1092_RS08960 PF00072 Response regulator receiver domain D1092_RS08960 PF00486 Transcriptional regulatory protein, C terminal D1092_RS08965 PF04972 BON domain D1092_RS08965 PF01476 LysM domain D1092_RS08975 PF00012 Hsp70 protein D1092_RS08980 PF00226 DnaJ domain D1092_RS08980 PF00684 DnaJ central domain D1092_RS08980 PF01556 DnaJ C terminal domain D1092_RS08990 PF00696 Amino acid kinase family D1092_RS09000 PF00679 Elongation factor G C-terminus D1092_RS09000 PF00009 Elongation factor Tu GTP binding domain D1092_RS09000 PF06421 GTP-binding protein LepA C-terminus D1092_RS09000 PF03144 Elongation factor Tu domain 2 D1092_RS09005 PF14602 Hexapeptide repeat of succinyl-transferase D1092_RS09005 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1092_RS09015 PF01416 tRNA pseudouridine synthase D1092_RS09020 PF02911 Formyl transferase, C-terminal domain D1092_RS09020 PF00551 Formyl transferase D1092_RS09025 PF01327 Polypeptide deformylase D1092_RS09030 PF02646 RmuC family D1092_RS09050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1092_RS09055 PF02224 Cytidylate kinase D1092_RS09060 PF00575 S1 RNA binding domain D1092_RS09065 PF06165 Glycosyltransferase family 36 D1092_RS09065 PF10091 Putative glucoamylase D1092_RS09065 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D1092_RS09070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D1092_RS09070 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D1092_RS09075 PF04304 Protein of unknown function (DUF454) D1092_RS09080 PF00950 ABC 3 transport family D1092_RS09085 PF00950 ABC 3 transport family D1092_RS09090 PF00005 ABC transporter D1092_RS09095 PF01297 Zinc-uptake complex component A periplasmic D1092_RS09100 PF03483 B3/4 domain D1092_RS09100 PF03147 Ferredoxin-fold anticodon binding domain D1092_RS09100 PF01588 Putative tRNA binding domain D1092_RS09100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1092_RS09100 PF03484 tRNA synthetase B5 domain D1092_RS09105 PF01409 tRNA synthetases class II core domain (F) D1092_RS09105 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1092_RS09110 PF00453 Ribosomal protein L20 D1092_RS09115 PF01632 Ribosomal protein L35 D1092_RS09120 PF00633 Helix-hairpin-helix motif D1092_RS09120 PF00730 HhH-GPD superfamily base excision DNA repair protein D1092_RS09120 PF10576 Iron-sulfur binding domain of endonuclease III D1092_RS09125 PF00011 Hsp20/alpha crystallin family D1092_RS09135 PF00920 Dehydratase family D1092_RS09140 PF05192 MutS domain III D1092_RS09140 PF05188 MutS domain II D1092_RS09140 PF01624 MutS domain I D1092_RS09140 PF05190 MutS family domain IV D1092_RS09140 PF00488 MutS domain V D1092_RS09145 PF00390 Malic enzyme, N-terminal domain D1092_RS09145 PF03949 Malic enzyme, NAD binding domain D1092_RS09145 PF01515 Phosphate acetyl/butaryl transferase D1092_RS09150 PF02556 Preprotein translocase subunit SecB D1092_RS09155 PF04186 FxsA cytoplasmic membrane protein D1092_RS09175 PF00202 Aminotransferase class-III D1092_RS09180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1092_RS09180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1092_RS09185 PF01430 Hsp33 protein D1092_RS09190 PF08534 Redoxin D1092_RS09200 PF01578 Cytochrome C assembly protein D1092_RS09205 PF03379 CcmB protein D1092_RS09210 PF00005 ABC transporter D1092_RS09215 PF00694 Aconitase C-terminal domain D1092_RS09215 PF00330 Aconitase family (aconitate hydratase) D1092_RS09220 PF01649 Ribosomal protein S20 D1092_RS09240 PF07015 VirC1 protein D1092_RS09250 PF01381 Helix-turn-helix D1092_RS09280 PF18821 Large polyvalent protein-associated domain 7 D1092_RS09280 PF03432 Relaxase/Mobilisation nuclease domain D1092_RS09285 PF04335 VirB8 protein D1092_RS09290 PF03524 Conjugal transfer protein D1092_RS09300 PF03743 Bacterial conjugation TrbI-like protein D1092_RS09315 PF02534 Type IV secretory system Conjugative DNA transfer D1092_RS09320 PF10502 Signal peptidase, peptidase S26 D1092_RS09330 PF08401 Domain of unknown function (DUF1738) D1092_RS09330 PF13362 Toprim domain D1092_RS09330 PF18818 Metallopeptidase superfamily domain D1092_RS09345 PF00437 Type II/IV secretion system protein D1092_RS09350 PF04956 TrbC/VIRB2 family D1092_RS09360 PF03135 CagE, TrbE, VirB family, component of type IV transporter system