locus-tag class description LBE40_RS00015 PF00691 OmpA family LBE40_RS00025 PF01171 PP-loop family LBE40_RS00030 PF00004 ATPase family associated with various cellular activities (AAA) LBE40_RS00030 PF17862 AAA+ lid domain LBE40_RS00030 PF06480 FtsH Extracellular LBE40_RS00030 PF01434 Peptidase family M41 LBE40_RS00035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LBE40_RS00035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LBE40_RS00035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LBE40_RS00035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LBE40_RS00050 PF01618 MotA/TolQ/ExbB proton channel family LBE40_RS00055 PF02472 Biopolymer transport protein ExbD/TolR LBE40_RS00060 PF00692 dUTPase LBE40_RS00090 PF13505 Outer membrane protein beta-barrel domain LBE40_RS00115 PF03421 YopJ Serine/Threonine acetyltransferase LBE40_RS00245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LBE40_RS00250 PF01381 Helix-turn-helix LBE40_RS00255 PF13277 YmdB-like protein LBE40_RS00265 PF01554 MatE LBE40_RS00280 PF00444 Ribosomal protein L36 LBE40_RS00285 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LBE40_RS00285 PF02222 ATP-grasp domain LBE40_RS00290 PF00731 AIR carboxylase LBE40_RS00295 PF01381 Helix-turn-helix LBE40_RS00305 PF02600 Disulfide bond formation protein DsbB LBE40_RS00320 PF06689 ClpX C4-type zinc finger LBE40_RS00320 PF10431 C-terminal, D2-small domain, of ClpB protein LBE40_RS00320 PF07724 AAA domain (Cdc48 subfamily) LBE40_RS00335 PF02534 Type IV secretory system Conjugative DNA transfer LBE40_RS00345 PF02600 Disulfide bond formation protein DsbB LBE40_RS00350 PF01176 Translation initiation factor 1A / IF-1 LBE40_RS00355 PF02545 Maf-like protein LBE40_RS00360 PF03884 DNA gyrase inhibitor YacG LBE40_RS00370 PF00004 ATPase family associated with various cellular activities (AAA) LBE40_RS00370 PF10431 C-terminal, D2-small domain, of ClpB protein LBE40_RS00370 PF02861 Clp amino terminal domain, pathogenicity island component LBE40_RS00370 PF17871 AAA lid domain LBE40_RS00370 PF07724 AAA domain (Cdc48 subfamily) LBE40_RS00460 PF07536 HWE histidine kinase LBE40_RS00460 PF08447 PAS fold LBE40_RS00460 PF13426 PAS domain LBE40_RS00465 PF00072 Response regulator receiver domain LBE40_RS00475 PF04542 Sigma-70 region 2 LBE40_RS00475 PF08281 Sigma-70, region 4 LBE40_RS00480 PF13426 PAS domain LBE40_RS00480 PF13581 Histidine kinase-like ATPase domain LBE40_RS00480 PF07568 Histidine kinase LBE40_RS00485 PF08460 Bacterial SH3 domain LBE40_RS00485 PF01551 Peptidase family M23 LBE40_RS00530 PF08892 YqcI/YcgG family LBE40_RS00555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LBE40_RS00560 PF13393 Histidyl-tRNA synthetase LBE40_RS00560 PF03129 Anticodon binding domain LBE40_RS00565 PF08534 Redoxin LBE40_RS00570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LBE40_RS00570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LBE40_RS00570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LBE40_RS00570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LBE40_RS00575 PF10415 Fumarase C C-terminus LBE40_RS00575 PF00206 Lyase LBE40_RS00580 PF00166 Chaperonin 10 Kd subunit LBE40_RS00585 PF00118 TCP-1/cpn60 chaperonin family LBE40_RS00590 PF01381 Helix-turn-helix LBE40_RS00595 PF08274 PhnA Zinc-Ribbon LBE40_RS00595 PF03831 PhnA domain LBE40_RS00600 PF01106 NifU-like domain LBE40_RS00620 PF00579 tRNA synthetases class I (W and Y) LBE40_RS00625 PF03023 Lipid II flippase MurJ LBE40_RS00630 PF02661 Fic/DOC family LBE40_RS00630 PF18543 Intracellular delivery domain LBE40_RS00645 PF02661 Fic/DOC family LBE40_RS00645 PF18543 Intracellular delivery domain LBE40_RS00655 PF02534 Type IV secretory system Conjugative DNA transfer LBE40_RS00660 PF02661 Fic/DOC family LBE40_RS00660 PF18543 Intracellular delivery domain LBE40_RS00670 PF00437 Type II/IV secretion system protein LBE40_RS00675 PF03743 Bacterial conjugation TrbI-like protein LBE40_RS00680 PF03524 Conjugal transfer protein LBE40_RS00685 PF04335 VirB8 protein LBE40_RS00695 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LBE40_RS00705 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LBE40_RS00710 PF05101 Type IV secretory pathway, VirB3-like protein LBE40_RS00715 PF04956 TrbC/VIRB2 family LBE40_RS00745 PF01687 Riboflavin kinase LBE40_RS00745 PF06574 FAD synthetase LBE40_RS00755 PF13614 AAA domain LBE40_RS00810 PF00005 ABC transporter LBE40_RS00815 PF01032 FecCD transport family LBE40_RS00820 PF01032 FecCD transport family LBE40_RS00825 PF01497 Periplasmic binding protein LBE40_RS00890 PF07683 Cobalamin synthesis protein cobW C-terminal domain LBE40_RS00890 PF02492 CobW/HypB/UreG, nucleotide-binding domain LBE40_RS00910 PF01575 MaoC like domain LBE40_RS00915 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS00920 PF09383 NIL domain LBE40_RS00920 PF00005 ABC transporter LBE40_RS00925 PF03180 NLPA lipoprotein LBE40_RS00935 PF02774 Semialdehyde dehydrogenase, dimerisation domain LBE40_RS00935 PF01118 Semialdehyde dehydrogenase, NAD binding domain LBE40_RS00940 PF01381 Helix-turn-helix LBE40_RS00955 PF02675 S-adenosylmethionine decarboxylase LBE40_RS00960 PF03966 Trm112p-like protein LBE40_RS00965 PF02190 ATP-dependent protease La (LON) substrate-binding domain LBE40_RS00965 PF05362 Lon protease (S16) C-terminal proteolytic domain LBE40_RS00965 PF00004 ATPase family associated with various cellular activities (AAA) LBE40_RS00970 PF08669 Glycine cleavage T-protein C-terminal barrel domain LBE40_RS00970 PF01571 Aminomethyltransferase folate-binding domain LBE40_RS00975 PF01597 Glycine cleavage H-protein LBE40_RS00980 PF02347 Glycine cleavage system P-protein LBE40_RS00985 PF00842 Alanine racemase, C-terminal domain LBE40_RS00985 PF01168 Alanine racemase, N-terminal domain LBE40_RS00990 PF00970 Oxidoreductase FAD-binding domain LBE40_RS00990 PF00175 Oxidoreductase NAD-binding domain LBE40_RS00995 PF01081 KDPG and KHG aldolase LBE40_RS01000 PF17773 UPF0176 acylphosphatase like domain LBE40_RS01000 PF00581 Rhodanese-like domain LBE40_RS01005 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LBE40_RS01005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LBE40_RS01015 PF07690 Major Facilitator Superfamily LBE40_RS01020 PF13533 Biotin-lipoyl like LBE40_RS01025 PF01475 Ferric uptake regulator family LBE40_RS01075 PF07690 Major Facilitator Superfamily LBE40_RS01085 PF00180 Isocitrate/isopropylmalate dehydrogenase LBE40_RS01085 PF03737 Aldolase/RraA LBE40_RS01090 PF01510 N-acetylmuramoyl-L-alanine amidase LBE40_RS01095 PF02530 Porin subfamily LBE40_RS01110 PF00899 ThiF family LBE40_RS01120 PF00300 Histidine phosphatase superfamily (branch 1) LBE40_RS01125 PF05173 Dihydrodipicolinate reductase, C-terminus LBE40_RS01125 PF01113 Dihydrodipicolinate reductase, N-terminus LBE40_RS01130 PF00043 Glutathione S-transferase, C-terminal domain LBE40_RS01130 PF13417 Glutathione S-transferase, N-terminal domain LBE40_RS01135 PF01926 50S ribosome-binding GTPase LBE40_RS01140 PF02096 60Kd inner membrane protein LBE40_RS01140 PF14849 YidC periplasmic domain LBE40_RS01145 PF00825 Ribonuclease P LBE40_RS01150 PF00468 Ribosomal protein L34 LBE40_RS01155 PF01883 Iron-sulfur cluster assembly protein LBE40_RS01155 PF10609 NUBPL iron-transfer P-loop NTPase LBE40_RS01160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LBE40_RS01165 PF02021 Uncharacterised protein family UPF0102 LBE40_RS01185 PF00766 Electron transfer flavoprotein FAD-binding domain LBE40_RS01185 PF01012 Electron transfer flavoprotein domain LBE40_RS01190 PF01012 Electron transfer flavoprotein domain LBE40_RS01200 PF01925 Sulfite exporter TauE/SafE LBE40_RS01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LBE40_RS01225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LBE40_RS01230 PF02601 Exonuclease VII, large subunit LBE40_RS01230 PF13742 OB-fold nucleic acid binding domain LBE40_RS01235 PF00958 GMP synthase C terminal domain LBE40_RS01235 PF00117 Glutamine amidotransferase class-I LBE40_RS01235 PF03352 Methyladenine glycosylase LBE40_RS01235 PF13302 Acetyltransferase (GNAT) domain LBE40_RS01235 PF13673 Acetyltransferase (GNAT) domain LBE40_RS01270 PF04055 Radical SAM superfamily LBE40_RS01270 PF06463 Molybdenum Cofactor Synthesis C LBE40_RS01320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LBE40_RS01320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LBE40_RS01325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LBE40_RS01340 PF10090 Histidine phosphotransferase C-terminal domain LBE40_RS01345 PF00486 Transcriptional regulatory protein, C terminal LBE40_RS01345 PF00072 Response regulator receiver domain LBE40_RS01370 PF01545 Cation efflux family LBE40_RS01370 PF16916 Dimerisation domain of Zinc Transporter LBE40_RS01395 PF07726 ATPase family associated with various cellular activities (AAA) LBE40_RS01395 PF17863 AAA lid domain LBE40_RS01400 PF13735 tRNA nucleotidyltransferase domain 2 putative LBE40_RS01400 PF01743 Poly A polymerase head domain LBE40_RS01400 PF12627 Probable RNA and SrmB- binding site of polymerase A LBE40_RS01405 PF00588 SpoU rRNA Methylase family LBE40_RS01410 PF00355 Rieske [2Fe-2S] domain LBE40_RS01410 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LBE40_RS01415 PF00032 Cytochrome b(C-terminal)/b6/petD LBE40_RS01415 PF00033 Cytochrome b/b6/petB LBE40_RS01420 PF00032 Cytochrome b(C-terminal)/b6/petD LBE40_RS01420 PF02167 Cytochrome C1 family LBE40_RS01420 PF00033 Cytochrome b/b6/petB LBE40_RS01430 PF06071 Protein of unknown function (DUF933) LBE40_RS01430 PF01926 50S ribosome-binding GTPase LBE40_RS01435 PF17969 L,D-transpeptidase C-terminal domain LBE40_RS01435 PF03734 L,D-transpeptidase catalytic domain LBE40_RS01440 PF01195 Peptidyl-tRNA hydrolase LBE40_RS01445 PF01386 Ribosomal L25p family LBE40_RS01445 PF14693 Ribosomal protein TL5, C-terminal domain LBE40_RS01455 PF14572 Phosphoribosyl synthetase-associated domain LBE40_RS01455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LBE40_RS01460 PF02578 Multi-copper polyphenol oxidoreductase laccase LBE40_RS01470 PF01790 Prolipoprotein diacylglyceryl transferase LBE40_RS01485 PF00672 HAMP domain LBE40_RS01485 PF00512 His Kinase A (phospho-acceptor) domain LBE40_RS01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS01485 PF16527 Two-component sensor protein CpxA, periplasmic domain LBE40_RS01490 PF00072 Response regulator receiver domain LBE40_RS01490 PF00486 Transcriptional regulatory protein, C terminal LBE40_RS01495 PF00753 Metallo-beta-lactamase superfamily LBE40_RS01520 PF04851 Type III restriction enzyme, res subunit LBE40_RS01520 PF17757 UvrB interaction domain LBE40_RS01520 PF00271 Helicase conserved C-terminal domain LBE40_RS01520 PF12344 Ultra-violet resistance protein B LBE40_RS01520 PF02151 UvrB/uvrC motif LBE40_RS01530 PF03449 Transcription elongation factor, N-terminal LBE40_RS01530 PF01272 Transcription elongation factor, GreA/GreB, C-term LBE40_RS01535 PF00534 Glycosyl transferases group 1 LBE40_RS01540 PF02386 Cation transport protein LBE40_RS01545 PF07992 Pyridine nucleotide-disulphide oxidoreductase LBE40_RS01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LBE40_RS01550 PF03466 LysR substrate binding domain LBE40_RS01555 PF00155 Aminotransferase class I and II LBE40_RS01560 PF00313 'Cold-shock' DNA-binding domain LBE40_RS01565 PF02142 MGS-like domain LBE40_RS01565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LBE40_RS01565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LBE40_RS01575 PF07690 Major Facilitator Superfamily LBE40_RS01580 PF00117 Glutamine amidotransferase class-I LBE40_RS01580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LBE40_RS01585 PF04345 Chorismate lyase LBE40_RS01595 PF02690 Na+/Pi-cotransporter LBE40_RS01600 PF00924 Mechanosensitive ion channel LBE40_RS01605 PF08278 DNA primase DnaG DnaB-binding LBE40_RS01605 PF08275 DNA primase catalytic core, N-terminal domain LBE40_RS01605 PF01807 CHC2 zinc finger LBE40_RS01605 PF10410 DnaB-helicase binding domain of primase LBE40_RS01610 PF04546 Sigma-70, non-essential region LBE40_RS01610 PF03979 Sigma-70 factor, region 1.1 LBE40_RS01610 PF00140 Sigma-70 factor, region 1.2 LBE40_RS01610 PF04542 Sigma-70 region 2 LBE40_RS01610 PF04539 Sigma-70 region 3 LBE40_RS01610 PF04545 Sigma-70, region 4 LBE40_RS01615 PF03692 Putative zinc- or iron-chelating domain LBE40_RS01620 PF04402 Protein of unknown function (DUF541) LBE40_RS01670 PF00857 Isochorismatase family LBE40_RS01680 PF00005 ABC transporter LBE40_RS01680 PF12848 ABC transporter LBE40_RS01685 PF01209 ubiE/COQ5 methyltransferase family LBE40_RS01695 PF01464 Transglycosylase SLT domain LBE40_RS01705 PF01795 MraW methylase family LBE40_RS01715 PF03717 Penicillin-binding Protein dimerisation domain LBE40_RS01715 PF00905 Penicillin binding protein transpeptidase domain LBE40_RS01720 PF01225 Mur ligase family, catalytic domain LBE40_RS01720 PF08245 Mur ligase middle domain LBE40_RS01720 PF02875 Mur ligase family, glutamate ligase domain LBE40_RS01725 PF08245 Mur ligase middle domain LBE40_RS01725 PF02875 Mur ligase family, glutamate ligase domain LBE40_RS01725 PF01225 Mur ligase family, catalytic domain LBE40_RS01730 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LBE40_RS01730 PF00953 Glycosyl transferase family 4 LBE40_RS01735 PF08245 Mur ligase middle domain LBE40_RS01740 PF01098 Cell cycle protein LBE40_RS01745 PF04101 Glycosyltransferase family 28 C-terminal domain LBE40_RS01745 PF03033 Glycosyltransferase family 28 N-terminal domain LBE40_RS01750 PF08245 Mur ligase middle domain LBE40_RS01750 PF02875 Mur ligase family, glutamate ligase domain LBE40_RS01750 PF01225 Mur ligase family, catalytic domain LBE40_RS01755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LBE40_RS01755 PF01565 FAD binding domain LBE40_RS01760 PF01820 D-ala D-ala ligase N-terminus LBE40_RS01760 PF07478 D-ala D-ala ligase C-terminus LBE40_RS01765 PF08478 POTRA domain, FtsQ-type LBE40_RS01765 PF03799 Cell division protein FtsQ LBE40_RS01770 PF02491 SHS2 domain inserted in FTSA LBE40_RS01775 PF12327 FtsZ family, C-terminal domain LBE40_RS01775 PF00091 Tubulin/FtsZ family, GTPase domain LBE40_RS01780 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LBE40_RS01785 PF13525 Outer membrane lipoprotein LBE40_RS01790 PF02463 RecF/RecN/SMC N terminal domain LBE40_RS01795 PF01653 NAD-dependent DNA ligase adenylation domain LBE40_RS01795 PF03120 NAD-dependent DNA ligase OB-fold domain LBE40_RS01795 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LBE40_RS01795 PF12826 Helix-hairpin-helix motif LBE40_RS01795 PF00533 BRCA1 C Terminus (BRCT) domain LBE40_RS01800 PF01321 Creatinase/Prolidase N-terminal domain LBE40_RS01800 PF00557 Metallopeptidase family M24 LBE40_RS01810 PF02630 SCO1/SenC LBE40_RS01815 PF00132 Bacterial transferase hexapeptide (six repeats) LBE40_RS01820 PF00580 UvrD/REP helicase N-terminal domain LBE40_RS01820 PF13361 UvrD-like helicase C-terminal domain LBE40_RS01850 PF00083 Sugar (and other) transporter LBE40_RS01855 PF00083 Sugar (and other) transporter LBE40_RS01860 PF00083 Sugar (and other) transporter LBE40_RS01865 PF00303 Thymidylate synthase LBE40_RS01870 PF00186 Dihydrofolate reductase LBE40_RS01885 PF13180 PDZ domain LBE40_RS01895 PF00205 Thiamine pyrophosphate enzyme, central domain LBE40_RS01895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LBE40_RS01895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LBE40_RS01910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LBE40_RS01910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LBE40_RS01915 PF13538 UvrD-like helicase C-terminal domain LBE40_RS01915 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LBE40_RS01915 PF14490 Helix-hairpin-helix containing domain LBE40_RS01920 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LBE40_RS01930 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LBE40_RS01930 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LBE40_RS01935 PF00324 Amino acid permease LBE40_RS01940 PF01810 LysE type translocator LBE40_RS01945 PF01557 Fumarylacetoacetate (FAA) hydrolase family LBE40_RS01950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LBE40_RS01950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LBE40_RS02030 PF03741 Integral membrane protein TerC family LBE40_RS02030 PF03471 Transporter associated domain LBE40_RS02040 PF02254 TrkA-N domain LBE40_RS02040 PF00999 Sodium/hydrogen exchanger family LBE40_RS02045 PF02355 Protein export membrane protein LBE40_RS02045 PF07549 SecD/SecF GG Motif LBE40_RS02055 PF12795 Mechanosensitive ion channel porin domain LBE40_RS02055 PF12794 Mechanosensitive ion channel inner membrane domain 1 LBE40_RS02055 PF00924 Mechanosensitive ion channel LBE40_RS02065 PF13505 Outer membrane protein beta-barrel domain LBE40_RS02075 PF00291 Pyridoxal-phosphate dependent enzyme LBE40_RS02075 PF00585 C-terminal regulatory domain of Threonine dehydratase LBE40_RS02085 PF00271 Helicase conserved C-terminal domain LBE40_RS02085 PF00270 DEAD/DEAH box helicase LBE40_RS02105 PF02321 Outer membrane efflux protein LBE40_RS02115 PF10458 Valyl tRNA synthetase tRNA binding arm LBE40_RS02115 PF00133 tRNA synthetases class I (I, L, M and V) LBE40_RS02115 PF08264 Anticodon-binding domain of tRNA LBE40_RS02120 PF08238 Sel1 repeat LBE40_RS02125 PF00005 ABC transporter LBE40_RS02130 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS02135 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS02140 PF00497 Bacterial extracellular solute-binding proteins, family 3 LBE40_RS02150 PF00164 Ribosomal protein S12/S23 LBE40_RS02155 PF00177 Ribosomal protein S7p/S5e LBE40_RS02160 PF00009 Elongation factor Tu GTP binding domain LBE40_RS02160 PF00679 Elongation factor G C-terminus LBE40_RS02160 PF14492 Elongation Factor G, domain II LBE40_RS02160 PF03764 Elongation factor G, domain IV LBE40_RS02160 PF03144 Elongation factor Tu domain 2 LBE40_RS02165 PF03144 Elongation factor Tu domain 2 LBE40_RS02165 PF03143 Elongation factor Tu C-terminal domain LBE40_RS02165 PF00009 Elongation factor Tu GTP binding domain LBE40_RS02170 PF00338 Ribosomal protein S10p/S20e LBE40_RS02175 PF00297 Ribosomal protein L3 LBE40_RS02180 PF00573 Ribosomal protein L4/L1 family LBE40_RS02185 PF00276 Ribosomal protein L23 LBE40_RS02190 PF00181 Ribosomal Proteins L2, RNA binding domain LBE40_RS02190 PF03947 Ribosomal Proteins L2, C-terminal domain LBE40_RS02195 PF00203 Ribosomal protein S19 LBE40_RS02200 PF00237 Ribosomal protein L22p/L17e LBE40_RS02205 PF00189 Ribosomal protein S3, C-terminal domain LBE40_RS02205 PF07650 KH domain LBE40_RS02210 PF00252 Ribosomal protein L16p/L10e LBE40_RS02215 PF00831 Ribosomal L29 protein LBE40_RS02220 PF00366 Ribosomal protein S17 LBE40_RS02225 PF00238 Ribosomal protein L14p/L23e LBE40_RS02230 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LBE40_RS02230 PF00467 KOW motif LBE40_RS02235 PF00673 ribosomal L5P family C-terminus LBE40_RS02235 PF00281 Ribosomal protein L5 LBE40_RS02240 PF00253 Ribosomal protein S14p/S29e LBE40_RS02245 PF00410 Ribosomal protein S8 LBE40_RS02250 PF00347 Ribosomal protein L6 LBE40_RS02255 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LBE40_RS02260 PF00333 Ribosomal protein S5, N-terminal domain LBE40_RS02260 PF03719 Ribosomal protein S5, C-terminal domain LBE40_RS02265 PF00327 Ribosomal protein L30p/L7e LBE40_RS02270 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LBE40_RS02275 PF00344 SecY translocase LBE40_RS02285 PF00416 Ribosomal protein S13/S18 LBE40_RS02290 PF00411 Ribosomal protein S11 LBE40_RS02295 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LBE40_RS02295 PF01000 RNA polymerase Rpb3/RpoA insert domain LBE40_RS02295 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LBE40_RS02300 PF01196 Ribosomal protein L17 LBE40_RS02305 PF17820 PDZ domain LBE40_RS02305 PF13180 PDZ domain LBE40_RS02310 PF00004 ATPase family associated with various cellular activities (AAA) LBE40_RS02310 PF16193 AAA C-terminal domain LBE40_RS02310 PF12002 MgsA AAA+ ATPase C terminal LBE40_RS02315 PF00154 recA bacterial DNA recombination protein LBE40_RS02320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LBE40_RS02320 PF01411 tRNA synthetases class II (A) LBE40_RS02320 PF02272 DHHA1 domain LBE40_RS02325 PF00005 ABC transporter LBE40_RS02325 PF00664 ABC transporter transmembrane region LBE40_RS02330 PF00849 RNA pseudouridylate synthase LBE40_RS02330 PF01479 S4 domain LBE40_RS02360 PF00892 EamA-like transporter family LBE40_RS02365 PF02222 ATP-grasp domain LBE40_RS02380 PF03951 Glutamine synthetase, beta-Grasp domain LBE40_RS02380 PF00120 Glutamine synthetase, catalytic domain LBE40_RS02385 PF00543 Nitrogen regulatory protein P-II LBE40_RS02390 PF17760 UvrA interaction domain LBE40_RS02390 PF17755 UvrA DNA-binding domain LBE40_RS02395 PF00436 Single-strand binding protein family LBE40_RS02400 PF00521 DNA gyrase/topoisomerase IV, subunit A LBE40_RS02400 PF03989 DNA gyrase C-terminal domain, beta-propeller LBE40_RS02405 PF01467 Cytidylyltransferase-like LBE40_RS02410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LBE40_RS02415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LBE40_RS02420 PF01702 Queuine tRNA-ribosyltransferase LBE40_RS02425 PF07690 Major Facilitator Superfamily LBE40_RS02430 PF07690 Major Facilitator Superfamily LBE40_RS02435 PF00180 Isocitrate/isopropylmalate dehydrogenase LBE40_RS02445 PF01842 ACT domain LBE40_RS02445 PF00742 Homoserine dehydrogenase LBE40_RS02445 PF03447 Homoserine dehydrogenase, NAD binding domain LBE40_RS02450 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LBE40_RS02455 PF01063 Amino-transferase class IV LBE40_RS02470 PF03485 Arginyl tRNA synthetase N terminal domain LBE40_RS02470 PF05746 DALR anticodon binding domain LBE40_RS02470 PF00750 tRNA synthetases class I (R) LBE40_RS02475 PF01966 HD domain LBE40_RS02475 PF13286 Phosphohydrolase-associated domain LBE40_RS02480 PF01521 Iron-sulphur cluster biosynthesis LBE40_RS02490 PF02683 Cytochrome C biogenesis protein transmembrane region LBE40_RS02495 PF00132 Bacterial transferase hexapeptide (six repeats) LBE40_RS02495 PF12804 MobA-like NTP transferase domain LBE40_RS02495 PF14602 Hexapeptide repeat of succinyl-transferase LBE40_RS02500 PF01380 SIS domain LBE40_RS02505 PF17191 RecG wedge domain LBE40_RS02505 PF00271 Helicase conserved C-terminal domain LBE40_RS02505 PF00270 DEAD/DEAH box helicase LBE40_RS02510 PF02811 PHP domain LBE40_RS02510 PF14579 Helix-hairpin-helix motif LBE40_RS02510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LBE40_RS02510 PF07733 Bacterial DNA polymerase III alpha NTPase domain LBE40_RS02515 PF01494 FAD binding domain LBE40_RS02525 PF13090 Polyphosphate kinase C-terminal domain 2 LBE40_RS02525 PF02503 Polyphosphate kinase middle domain LBE40_RS02525 PF13089 Polyphosphate kinase N-terminal domain LBE40_RS02525 PF17941 Polyphosphate kinase C-terminal domain 1 LBE40_RS02535 PF01612 3'-5' exonuclease LBE40_RS02535 PF00570 HRDC domain LBE40_RS02540 PF01336 OB-fold nucleic acid binding domain LBE40_RS02540 PF00152 tRNA synthetases class II (D, K and N) LBE40_RS02540 PF02938 GAD domain LBE40_RS02545 PF00521 DNA gyrase/topoisomerase IV, subunit A LBE40_RS02545 PF03989 DNA gyrase C-terminal domain, beta-propeller LBE40_RS02550 PF07690 Major Facilitator Superfamily LBE40_RS02555 PF00462 Glutaredoxin LBE40_RS02565 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LBE40_RS02565 PF02769 AIR synthase related protein, C-terminal domain LBE40_RS02565 PF00586 AIR synthase related protein, N-terminal domain LBE40_RS02575 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LBE40_RS02580 PF01259 SAICAR synthetase LBE40_RS02590 PF00206 Lyase LBE40_RS02590 PF10397 Adenylosuccinate lyase C-terminus LBE40_RS02595 PF00834 Ribulose-phosphate 3 epimerase family LBE40_RS02600 PF01613 Flavin reductase like domain LBE40_RS02605 PF01258 Prokaryotic dksA/traR C4-type zinc finger LBE40_RS02615 PF13188 PAS domain LBE40_RS02615 PF08448 PAS fold LBE40_RS02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS02615 PF00512 His Kinase A (phospho-acceptor) domain LBE40_RS02615 PF00072 Response regulator receiver domain LBE40_RS02620 PF00551 Formyl transferase LBE40_RS02625 PF02769 AIR synthase related protein, C-terminal domain LBE40_RS02625 PF00586 AIR synthase related protein, N-terminal domain LBE40_RS02630 PF01594 AI-2E family transporter LBE40_RS02690 PF00072 Response regulator receiver domain LBE40_RS02700 PF00011 Hsp20/alpha crystallin family LBE40_RS02715 PF03819 MazG nucleotide pyrophosphohydrolase domain LBE40_RS02725 PF00107 Zinc-binding dehydrogenase LBE40_RS02725 PF08240 Alcohol dehydrogenase GroES-like domain LBE40_RS02730 PF02801 Beta-ketoacyl synthase, C-terminal domain LBE40_RS02730 PF00109 Beta-ketoacyl synthase, N-terminal domain LBE40_RS02735 PF02801 Beta-ketoacyl synthase, C-terminal domain LBE40_RS02735 PF00109 Beta-ketoacyl synthase, N-terminal domain LBE40_RS02740 PF00550 Phosphopantetheine attachment site LBE40_RS02745 PF01515 Phosphate acetyl/butaryl transferase LBE40_RS02745 PF00390 Malic enzyme, N-terminal domain LBE40_RS02745 PF03949 Malic enzyme, NAD binding domain LBE40_RS02755 PF17209 Hfq protein LBE40_RS02760 PF01926 50S ribosome-binding GTPase LBE40_RS02760 PF13167 GTP-binding GTPase N-terminal LBE40_RS02760 PF16360 GTP-binding GTPase Middle Region LBE40_RS02770 PF02628 Cytochrome oxidase assembly protein LBE40_RS02775 PF01118 Semialdehyde dehydrogenase, NAD binding domain LBE40_RS02780 PF00464 Serine hydroxymethyltransferase LBE40_RS02785 PF03477 ATP cone domain LBE40_RS02790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LBE40_RS02790 PF01872 RibD C-terminal domain LBE40_RS02795 PF00677 Lumazine binding domain LBE40_RS02800 PF00885 6,7-dimethyl-8-ribityllumazine synthase LBE40_RS02805 PF01029 NusB family LBE40_RS02820 PF02504 Fatty acid synthesis protein LBE40_RS02825 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LBE40_RS02825 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LBE40_RS02830 PF00216 Bacterial DNA-binding protein LBE40_RS02835 PF13411 MerR HTH family regulatory protein LBE40_RS02840 PF03129 Anticodon binding domain LBE40_RS02840 PF02824 TGS domain LBE40_RS02840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LBE40_RS02840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LBE40_RS02845 PF01809 Putative membrane protein insertion efficiency factor LBE40_RS02855 PF01227 GTP cyclohydrolase I LBE40_RS02880 PF08346 AntA/AntB antirepressor LBE40_RS02880 PF10548 P22AR C-terminal domain LBE40_RS02955 PF04984 Phage tail sheath protein subtilisin-like domain LBE40_RS02955 PF17482 Phage tail sheath C-terminal domain LBE40_RS03130 PF08346 AntA/AntB antirepressor LBE40_RS03130 PF10548 P22AR C-terminal domain LBE40_RS03150 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system LBE40_RS03160 PF00436 Single-strand binding protein family LBE40_RS03170 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system LBE40_RS03180 PF08346 AntA/AntB antirepressor LBE40_RS03180 PF10548 P22AR C-terminal domain LBE40_RS03240 PF10548 P22AR C-terminal domain LBE40_RS03240 PF08346 AntA/AntB antirepressor LBE40_RS03275 PF04102 SlyX LBE40_RS03285 PF00324 Amino acid permease LBE40_RS03290 PF00005 ABC transporter LBE40_RS03295 PF02361 Cobalt transport protein LBE40_RS03300 PF02632 BioY family LBE40_RS03320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LBE40_RS03320 PF02785 Biotin carboxylase C-terminal domain LBE40_RS03320 PF00289 Biotin carboxylase, N-terminal domain LBE40_RS03325 PF00364 Biotin-requiring enzyme LBE40_RS03335 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LBE40_RS03335 PF01266 FAD dependent oxidoreductase LBE40_RS03340 PF01207 Dihydrouridine synthase (Dus) LBE40_RS03345 PF02277 Phosphoribosyltransferase LBE40_RS03350 PF13404 AsnC-type helix-turn-helix domain LBE40_RS03350 PF01037 Lrp/AsnC ligand binding domain LBE40_RS03355 PF03167 Uracil DNA glycosylase superfamily LBE40_RS03365 PF00471 Ribosomal protein L33 LBE40_RS03370 PF17876 Cold shock domain LBE40_RS03370 PF08461 Ribonuclease R winged-helix domain LBE40_RS03370 PF08206 Ribonuclease B OB domain LBE40_RS03370 PF00773 RNB domain LBE40_RS03370 PF00575 S1 RNA binding domain LBE40_RS03375 PF01396 Topoisomerase DNA binding C4 zinc finger LBE40_RS03375 PF13368 Topoisomerase C-terminal repeat LBE40_RS03375 PF01751 Toprim domain LBE40_RS03375 PF01131 DNA topoisomerase LBE40_RS03385 PF17782 DprA winged helix domain LBE40_RS03385 PF02481 DNA recombination-mediator protein A LBE40_RS03390 PF02660 Glycerol-3-phosphate acyltransferase LBE40_RS03395 PF01979 Amidohydrolase family LBE40_RS03400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LBE40_RS03400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LBE40_RS03410 PF03652 Holliday junction resolvase LBE40_RS03415 PF02686 Glu-tRNAGln amidotransferase C subunit LBE40_RS03420 PF01425 Amidase LBE40_RS03425 PF00005 ABC transporter LBE40_RS03430 PF12399 Branched-chain amino acid ATP-binding cassette transporter LBE40_RS03430 PF00005 ABC transporter LBE40_RS03435 PF02653 Branched-chain amino acid transport system / permease component LBE40_RS03435 PF11862 Domain of unknown function (DUF3382) LBE40_RS03440 PF02653 Branched-chain amino acid transport system / permease component LBE40_RS03450 PF00313 'Cold-shock' DNA-binding domain LBE40_RS03460 PF00561 alpha/beta hydrolase fold LBE40_RS03470 PF04002 RadC-like JAB domain LBE40_RS03475 PF00557 Metallopeptidase family M24 LBE40_RS03480 PF17746 SfsA N-terminal OB domain LBE40_RS03480 PF03749 Sugar fermentation stimulation protein RE domain LBE40_RS03485 PF00588 SpoU rRNA Methylase family LBE40_RS03490 PF01177 Asp/Glu/Hydantoin racemase LBE40_RS03495 PF01479 S4 domain LBE40_RS03495 PF00163 Ribosomal protein S4/S9 N-terminal domain LBE40_RS03500 PF01171 PP-loop family LBE40_RS03505 PF00919 Uncharacterized protein family UPF0004 LBE40_RS03505 PF18693 TRAM domain LBE40_RS03505 PF04055 Radical SAM superfamily LBE40_RS03510 PF00717 Peptidase S24-like LBE40_RS03510 PF01726 LexA DNA binding domain LBE40_RS03520 PF05036 Sporulation related domain LBE40_RS03520 PF03330 Lytic transglycolase LBE40_RS03525 PF00768 D-alanyl-D-alanine carboxypeptidase LBE40_RS03525 PF07943 Penicillin-binding protein 5, C-terminal domain LBE40_RS03530 PF02223 Thymidylate kinase LBE40_RS03535 PF09115 DNA polymerase III, delta subunit, C terminal LBE40_RS03540 PF09334 tRNA synthetases class I (M) LBE40_RS03545 PF01026 TatD related DNase LBE40_RS03550 PF12706 Beta-lactamase superfamily domain LBE40_RS03550 PF03099 Biotin/lipoate A/B protein ligase family LBE40_RS03565 PF00378 Enoyl-CoA hydratase/isomerase LBE40_RS03570 PF01066 CDP-alcohol phosphatidyltransferase LBE40_RS03575 PF01494 FAD binding domain LBE40_RS03590 PF00080 Copper/zinc superoxide dismutase (SODC) LBE40_RS03605 PF01555 DNA methylase LBE40_RS03610 PF01883 Iron-sulfur cluster assembly protein LBE40_RS03615 PF00266 Aminotransferase class-V LBE40_RS03620 PF01458 Uncharacterized protein family (UPF0051) LBE40_RS03625 PF00005 ABC transporter LBE40_RS03630 PF01458 Uncharacterized protein family (UPF0051) LBE40_RS03635 PF00266 Aminotransferase class-V LBE40_RS03640 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LBE40_RS03645 PF00579 tRNA synthetases class I (W and Y) LBE40_RS03645 PF01479 S4 domain LBE40_RS03650 PF00578 AhpC/TSA family LBE40_RS03660 PF17092 Penicillin-binding protein OB-like domain LBE40_RS03660 PF00912 Transglycosylase LBE40_RS03660 PF00905 Penicillin binding protein transpeptidase domain LBE40_RS03665 PF01520 N-acetylmuramoyl-L-alanine amidase LBE40_RS03665 PF11741 AMIN domain LBE40_RS03670 PF12111 Polyribonucleotide phosphorylase C terminal LBE40_RS03670 PF10150 Ribonuclease E/G family LBE40_RS03670 PF00575 S1 RNA binding domain LBE40_RS03680 PF02559 CarD-like/TRCF domain LBE40_RS03680 PF00270 DEAD/DEAH box helicase LBE40_RS03680 PF00271 Helicase conserved C-terminal domain LBE40_RS03680 PF17757 UvrB interaction domain LBE40_RS03680 PF03461 TRCF domain LBE40_RS03685 PF03937 Flavinator of succinate dehydrogenase LBE40_RS03690 PF00005 ABC transporter LBE40_RS03695 PF02687 FtsX-like permease family LBE40_RS03695 PF12704 MacB-like periplasmic core domain LBE40_RS03700 PF03129 Anticodon binding domain LBE40_RS03700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LBE40_RS03705 PF17770 Ribonuclease J C-terminal domain LBE40_RS03705 PF12706 Beta-lactamase superfamily domain LBE40_RS03705 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LBE40_RS03710 PF03099 Biotin/lipoate A/B protein ligase family LBE40_RS03710 PF08279 HTH domain LBE40_RS03710 PF02237 Biotin protein ligase C terminal domain LBE40_RS03715 PF00361 Proton-conducting membrane transporter LBE40_RS03720 PF00361 Proton-conducting membrane transporter LBE40_RS03725 PF00361 Proton-conducting membrane transporter LBE40_RS03725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LBE40_RS03730 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LBE40_RS03735 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LBE40_RS03740 PF12838 4Fe-4S dicluster domain LBE40_RS03745 PF00146 NADH dehydrogenase LBE40_RS03750 PF00384 Molybdopterin oxidoreductase LBE40_RS03750 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LBE40_RS03750 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LBE40_RS03755 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LBE40_RS03755 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LBE40_RS03755 PF10531 SLBB domain LBE40_RS03765 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LBE40_RS03770 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LBE40_RS03775 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LBE40_RS03780 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LBE40_RS03800 PF00324 Amino acid permease LBE40_RS03810 PF00221 Aromatic amino acid lyase LBE40_RS03820 PF01513 ATP-NAD kinase LBE40_RS03825 PF00270 DEAD/DEAH box helicase LBE40_RS03825 PF00271 Helicase conserved C-terminal domain LBE40_RS03830 PF00749 tRNA synthetases class I (E and Q), catalytic domain LBE40_RS03835 PF02540 NAD synthase LBE40_RS03835 PF00795 Carbon-nitrogen hydrolase LBE40_RS03840 PF01474 Class-II DAHP synthetase family LBE40_RS03845 PF07992 Pyridine nucleotide-disulphide oxidoreductase LBE40_RS03845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LBE40_RS03855 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LBE40_RS03860 PF00753 Metallo-beta-lactamase superfamily LBE40_RS03860 PF13567 Domain of unknown function (DUF4131) LBE40_RS03860 PF03772 Competence protein LBE40_RS03865 PF00749 tRNA synthetases class I (E and Q), catalytic domain LBE40_RS03870 PF00285 Citrate synthase, C-terminal domain LBE40_RS03875 PF00497 Bacterial extracellular solute-binding proteins, family 3 LBE40_RS03880 PF00497 Bacterial extracellular solute-binding proteins, family 3 LBE40_RS03885 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS03890 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS03895 PF00005 ABC transporter LBE40_RS03900 PF02684 Lipid-A-disaccharide synthetase LBE40_RS03910 PF00132 Bacterial transferase hexapeptide (six repeats) LBE40_RS03910 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LBE40_RS03915 PF07977 FabA-like domain LBE40_RS03920 PF00132 Bacterial transferase hexapeptide (six repeats) LBE40_RS03920 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LBE40_RS03925 PF07244 Surface antigen variable number repeat LBE40_RS03925 PF01103 Surface antigen LBE40_RS03930 PF02163 Peptidase family M50 LBE40_RS03930 PF17820 PDZ domain LBE40_RS03940 PF01765 Ribosome recycling factor LBE40_RS03945 PF00696 Amino acid kinase family LBE40_RS03950 PF00889 Elongation factor TS LBE40_RS03955 PF00318 Ribosomal protein S2 LBE40_RS03970 PF01230 HIT domain LBE40_RS03975 PF07724 AAA domain (Cdc48 subfamily) LBE40_RS03975 PF00004 ATPase family associated with various cellular activities (AAA) LBE40_RS03975 PF02861 Clp amino terminal domain, pathogenicity island component LBE40_RS03975 PF10431 C-terminal, D2-small domain, of ClpB protein LBE40_RS03975 PF17871 AAA lid domain LBE40_RS03980 PF02617 ATP-dependent Clp protease adaptor protein ClpS LBE40_RS03985 PF07943 Penicillin-binding protein 5, C-terminal domain LBE40_RS03985 PF00768 D-alanyl-D-alanine carboxypeptidase LBE40_RS03995 PF03315 Serine dehydratase beta chain LBE40_RS03995 PF03313 Serine dehydratase alpha chain LBE40_RS04000 PF00881 Nitroreductase family LBE40_RS04005 PF13411 MerR HTH family regulatory protein LBE40_RS04010 PF04998 RNA polymerase Rpb1, domain 5 LBE40_RS04010 PF05000 RNA polymerase Rpb1, domain 4 LBE40_RS04010 PF04983 RNA polymerase Rpb1, domain 3 LBE40_RS04010 PF00623 RNA polymerase Rpb1, domain 2 LBE40_RS04010 PF04997 RNA polymerase Rpb1, domain 1 LBE40_RS04015 PF04563 RNA polymerase beta subunit LBE40_RS04015 PF00562 RNA polymerase Rpb2, domain 6 LBE40_RS04015 PF10385 RNA polymerase beta subunit external 1 domain LBE40_RS04015 PF04560 RNA polymerase Rpb2, domain 7 LBE40_RS04015 PF04561 RNA polymerase Rpb2, domain 2 LBE40_RS04015 PF04565 RNA polymerase Rpb2, domain 3 LBE40_RS04020 PF16320 Ribosomal protein L7/L12 dimerisation domain LBE40_RS04020 PF00542 Ribosomal protein L7/L12 C-terminal domain LBE40_RS04025 PF00466 Ribosomal protein L10 LBE40_RS04030 PF00687 Ribosomal protein L1p/L10e family LBE40_RS04035 PF03946 Ribosomal protein L11, N-terminal domain LBE40_RS04035 PF00298 Ribosomal protein L11, RNA binding domain LBE40_RS04040 PF02357 Transcription termination factor nusG LBE40_RS04040 PF00467 KOW motif LBE40_RS04045 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LBE40_RS04055 PF03144 Elongation factor Tu domain 2 LBE40_RS04055 PF00009 Elongation factor Tu GTP binding domain LBE40_RS04055 PF03143 Elongation factor Tu C-terminal domain LBE40_RS04070 PF08032 RNA 2'-O ribose methyltransferase substrate binding LBE40_RS04070 PF00588 SpoU rRNA Methylase family LBE40_RS04080 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) LBE40_RS04090 PF02637 GatB domain LBE40_RS04090 PF02934 GatB/GatE catalytic domain LBE40_RS04095 PF05697 Bacterial trigger factor protein (TF) LBE40_RS04095 PF05698 Bacterial trigger factor protein (TF) C-terminus LBE40_RS04095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LBE40_RS04105 PF01134 Glucose inhibited division protein A LBE40_RS04110 PF00216 Bacterial DNA-binding protein LBE40_RS04115 PF05362 Lon protease (S16) C-terminal proteolytic domain LBE40_RS04115 PF02190 ATP-dependent protease La (LON) substrate-binding domain LBE40_RS04115 PF00004 ATPase family associated with various cellular activities (AAA) LBE40_RS04120 PF07724 AAA domain (Cdc48 subfamily) LBE40_RS04120 PF10431 C-terminal, D2-small domain, of ClpB protein LBE40_RS04120 PF06689 ClpX C4-type zinc finger LBE40_RS04125 PF00574 Clp protease LBE40_RS04135 PF02080 TrkA-C domain LBE40_RS04135 PF02254 TrkA-N domain LBE40_RS04140 PF02954 Bacterial regulatory protein, Fis family LBE40_RS04140 PF00158 Sigma-54 interaction domain LBE40_RS04140 PF00072 Response regulator receiver domain LBE40_RS04145 PF00672 HAMP domain LBE40_RS04145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS04145 PF00512 His Kinase A (phospho-acceptor) domain LBE40_RS04145 PF00989 PAS fold LBE40_RS04150 PF02082 Transcriptional regulator LBE40_RS04155 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LBE40_RS04155 PF02542 YgbB family LBE40_RS04160 PF02464 Competence-damaged protein LBE40_RS04160 PF00994 Probable molybdopterin binding domain LBE40_RS04160 PF18146 Damage-inducible protein CinA KH domain LBE40_RS04165 PF03364 Polyketide cyclase / dehydrase and lipid transport LBE40_RS04170 PF04055 Radical SAM superfamily LBE40_RS04175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LBE40_RS04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase LBE40_RS04180 PF02817 e3 binding domain LBE40_RS04180 PF00364 Biotin-requiring enzyme LBE40_RS04180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LBE40_RS04185 PF02780 Transketolase, C-terminal domain LBE40_RS04185 PF02779 Transketolase, pyrimidine binding domain LBE40_RS04185 PF00364 Biotin-requiring enzyme LBE40_RS04190 PF00676 Dehydrogenase E1 component LBE40_RS04215 PF03952 Enolase, N-terminal domain LBE40_RS04215 PF00113 Enolase, C-terminal TIM barrel domain LBE40_RS04220 PF00793 DAHP synthetase I family LBE40_RS04225 PF00117 Glutamine amidotransferase class-I LBE40_RS04225 PF06418 CTP synthase N-terminus LBE40_RS04230 PF03840 Preprotein translocase SecG subunit LBE40_RS04235 PF00121 Triosephosphate isomerase LBE40_RS04255 PF02699 Preprotein translocase subunit LBE40_RS04260 PF01551 Peptidase family M23 LBE40_RS04260 PF01476 LysM domain LBE40_RS04270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LBE40_RS04270 PF02403 Seryl-tRNA synthetase N-terminal domain LBE40_RS04275 PF00902 Sec-independent protein translocase protein (TatC) LBE40_RS04280 PF02416 mttA/Hcf106 family LBE40_RS04285 PF02416 mttA/Hcf106 family LBE40_RS04290 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LBE40_RS04295 PF02151 UvrB/uvrC motif LBE40_RS04295 PF12826 Helix-hairpin-helix motif LBE40_RS04295 PF01541 GIY-YIG catalytic domain LBE40_RS04295 PF08459 UvrC Helix-hairpin-helix N-terminal LBE40_RS04300 PF01066 CDP-alcohol phosphatidyltransferase LBE40_RS04305 PF00334 Nucleoside diphosphate kinase LBE40_RS04310 PF03212 Pertactin LBE40_RS04310 PF13018 Extended Signal Peptide of Type V secretion system LBE40_RS04310 PF03797 Autotransporter beta-domain LBE40_RS04310 PF16168 Adhesin of bacterial autotransporter system, probable stalk LBE40_RS04315 PF16168 Adhesin of bacterial autotransporter system, probable stalk LBE40_RS04315 PF03212 Pertactin LBE40_RS04315 PF03797 Autotransporter beta-domain LBE40_RS04315 PF13018 Extended Signal Peptide of Type V secretion system LBE40_RS04320 PF16168 Adhesin of bacterial autotransporter system, probable stalk LBE40_RS04320 PF03212 Pertactin LBE40_RS04320 PF03797 Autotransporter beta-domain LBE40_RS04320 PF13018 Extended Signal Peptide of Type V secretion system LBE40_RS04325 PF00083 Sugar (and other) transporter LBE40_RS04325 PF07690 Major Facilitator Superfamily LBE40_RS04355 PF04453 LPS transport system D LBE40_RS04355 PF03968 OstA-like protein LBE40_RS04365 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LBE40_RS04370 PF00398 Ribosomal RNA adenine dimethylase LBE40_RS04375 PF00625 Guanylate kinase LBE40_RS04380 PF02618 YceG-like family LBE40_RS04385 PF02801 Beta-ketoacyl synthase, C-terminal domain LBE40_RS04385 PF00109 Beta-ketoacyl synthase, N-terminal domain LBE40_RS04390 PF00550 Phosphopantetheine attachment site LBE40_RS04400 PF00698 Acyl transferase domain LBE40_RS04405 PF01569 PAP2 superfamily LBE40_RS04410 PF01250 Ribosomal protein S6 LBE40_RS04415 PF01084 Ribosomal protein S18 LBE40_RS04425 PF03948 Ribosomal protein L9, C-terminal domain LBE40_RS04425 PF01281 Ribosomal protein L9, N-terminal domain LBE40_RS04430 PF03796 DnaB-like helicase C terminal domain LBE40_RS04430 PF00772 DnaB-like helicase N terminal domain LBE40_RS04445 PF06745 KaiC LBE40_RS04445 PF18073 Rubredoxin metal binding domain LBE40_RS04455 PF13537 Glutamine amidotransferase domain LBE40_RS04455 PF00156 Phosphoribosyl transferase domain LBE40_RS04460 PF00106 short chain dehydrogenase LBE40_RS04465 PF01066 CDP-alcohol phosphatidyltransferase LBE40_RS04470 PF02666 Phosphatidylserine decarboxylase LBE40_RS04475 PF00664 ABC transporter transmembrane region LBE40_RS04475 PF00005 ABC transporter LBE40_RS04485 PF01406 tRNA synthetases class I (C) catalytic domain LBE40_RS04495 PF01979 Amidohydrolase family LBE40_RS04500 PF01571 Aminomethyltransferase folate-binding domain LBE40_RS04505 PF01966 HD domain LBE40_RS04510 PF02548 Ketopantoate hydroxymethyltransferase LBE40_RS04515 PF02569 Pantoate-beta-alanine ligase LBE40_RS04520 PF11967 Recombination protein O N terminal LBE40_RS04520 PF02565 Recombination protein O C terminal LBE40_RS04525 PF07650 KH domain LBE40_RS04525 PF01926 50S ribosome-binding GTPase LBE40_RS04530 PF14622 Ribonuclease-III-like LBE40_RS04530 PF00035 Double-stranded RNA binding motif LBE40_RS04535 PF10502 Signal peptidase, peptidase S26 LBE40_RS04540 PF01648 4'-phosphopantetheinyl transferase superfamily LBE40_RS04550 PF00156 Phosphoribosyl transferase domain LBE40_RS04555 PF02824 TGS domain LBE40_RS04555 PF04607 Region found in RelA / SpoT proteins LBE40_RS04555 PF13291 ACT domain LBE40_RS04560 PF01192 RNA polymerase Rpb6 LBE40_RS04565 PF03167 Uracil DNA glycosylase superfamily LBE40_RS04570 PF01668 SmpB protein LBE40_RS04575 PF00701 Dihydrodipicolinate synthetase family LBE40_RS04590 PF00593 TonB dependent receptor LBE40_RS04590 PF07715 TonB-dependent Receptor Plug Domain LBE40_RS04595 PF05171 Haemin-degrading HemS.ChuX domain LBE40_RS04600 PF01497 Periplasmic binding protein LBE40_RS04605 PF01032 FecCD transport family LBE40_RS04610 PF00005 ABC transporter LBE40_RS04615 PF07484 Phage Tail Collar Domain LBE40_RS04620 PF01964 Radical SAM ThiC family LBE40_RS04620 PF13667 ThiC-associated domain LBE40_RS04625 PF01266 FAD dependent oxidoreductase LBE40_RS04635 PF05690 Thiazole biosynthesis protein ThiG LBE40_RS04680 PF13332 Hemagglutinin repeat LBE40_RS04680 PF04829 Pre-toxin domain with VENN motif LBE40_RS04680 PF05860 haemagglutination activity domain LBE40_RS04720 PF04829 Pre-toxin domain with VENN motif LBE40_RS04720 PF05860 haemagglutination activity domain LBE40_RS04720 PF13332 Hemagglutinin repeat LBE40_RS04720 PF04829 Pre-toxin domain with VENN motif LBE40_RS04720 PF05860 haemagglutination activity domain LBE40_RS04720 PF13332 Hemagglutinin repeat LBE40_RS04725 PF08479 POTRA domain, ShlB-type LBE40_RS04725 PF17287 POTRA domain LBE40_RS04725 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LBE40_RS04735 PF03796 DnaB-like helicase C terminal domain LBE40_RS04735 PF00772 DnaB-like helicase N terminal domain LBE40_RS04775 PF04829 Pre-toxin domain with VENN motif LBE40_RS04775 PF13332 Hemagglutinin repeat LBE40_RS04775 PF05860 haemagglutination activity domain LBE40_RS04825 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LBE40_RS04825 PF17287 POTRA domain LBE40_RS04825 PF08479 POTRA domain, ShlB-type LBE40_RS04890 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LBE40_RS04895 PF04221 RelB antitoxin LBE40_RS04905 PF01381 Helix-turn-helix LBE40_RS04960 PF00005 ABC transporter LBE40_RS04960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LBE40_RS04965 PF00005 ABC transporter LBE40_RS04965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LBE40_RS04970 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS04970 PF12911 N-terminal TM domain of oligopeptide transport permease C LBE40_RS04975 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS04980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LBE40_RS04985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LBE40_RS04995 PF04536 TPM domain LBE40_RS05000 PF03099 Biotin/lipoate A/B protein ligase family LBE40_RS05005 PF01751 Toprim domain LBE40_RS05005 PF00204 DNA gyrase B LBE40_RS05005 PF00986 DNA gyrase B subunit, carboxyl terminus LBE40_RS05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS05010 PF17768 RecJ OB domain LBE40_RS05010 PF02272 DHHA1 domain LBE40_RS05010 PF01368 DHH family LBE40_RS05015 PF00572 Ribosomal protein L13 LBE40_RS05020 PF00380 Ribosomal protein S9/S16 LBE40_RS05025 PF00072 Response regulator receiver domain LBE40_RS05040 PF03412 Peptidase C39 family LBE40_RS05040 PF00005 ABC transporter LBE40_RS05040 PF00664 ABC transporter transmembrane region LBE40_RS05110 PF13332 Hemagglutinin repeat LBE40_RS05110 PF05860 haemagglutination activity domain LBE40_RS05110 PF04829 Pre-toxin domain with VENN motif LBE40_RS05130 PF04829 Pre-toxin domain with VENN motif LBE40_RS05130 PF05860 haemagglutination activity domain LBE40_RS05130 PF13332 Hemagglutinin repeat LBE40_RS05130 PF04829 Pre-toxin domain with VENN motif LBE40_RS05130 PF05860 haemagglutination activity domain LBE40_RS05130 PF13332 Hemagglutinin repeat LBE40_RS05135 PF17287 POTRA domain LBE40_RS05135 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LBE40_RS05135 PF08479 POTRA domain, ShlB-type LBE40_RS05160 PF02581 Thiamine monophosphate synthase LBE40_RS05165 PF08543 Phosphomethylpyrimidine kinase LBE40_RS05175 PF01433 Peptidase family M1 domain LBE40_RS05175 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LBE40_RS05175 PF11940 Domain of unknown function (DUF3458) Ig-like fold LBE40_RS05180 PF00989 PAS fold LBE40_RS05180 PF00512 His Kinase A (phospho-acceptor) domain LBE40_RS05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS05185 PF12833 Helix-turn-helix domain LBE40_RS05185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LBE40_RS05185 PF02805 Metal binding domain of Ada LBE40_RS05185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LBE40_RS05190 PF13505 Outer membrane protein beta-barrel domain LBE40_RS05195 PF03710 Glutamate-ammonia ligase adenylyltransferase LBE40_RS05195 PF08335 GlnD PII-uridylyltransferase LBE40_RS05200 PF00512 His Kinase A (phospho-acceptor) domain LBE40_RS05200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS05200 PF00672 HAMP domain LBE40_RS05205 PF00486 Transcriptional regulatory protein, C terminal LBE40_RS05205 PF00072 Response regulator receiver domain LBE40_RS05210 PF17820 PDZ domain LBE40_RS05210 PF13180 PDZ domain LBE40_RS05215 PF03918 Cytochrome C biogenesis protein LBE40_RS05220 PF01578 Cytochrome C assembly protein LBE40_RS05220 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LBE40_RS05225 PF03100 CcmE LBE40_RS05250 PF00912 Transglycosylase LBE40_RS05250 PF17092 Penicillin-binding protein OB-like domain LBE40_RS05250 PF00905 Penicillin binding protein transpeptidase domain LBE40_RS05300 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LBE40_RS05300 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LBE40_RS05305 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LBE40_RS05305 PF00326 Prolyl oligopeptidase family LBE40_RS05310 PF05443 ROS/MUCR transcriptional regulator protein LBE40_RS05315 PF02657 Fe-S metabolism associated domain LBE40_RS05330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LBE40_RS05330 PF02896 PEP-utilising enzyme, TIM barrel domain LBE40_RS05330 PF00391 PEP-utilising enzyme, mobile domain LBE40_RS05335 PF13462 Thioredoxin LBE40_RS05335 PF06965 Na+/H+ antiporter 1 LBE40_RS05345 PF14815 NUDIX domain LBE40_RS05345 PF00730 HhH-GPD superfamily base excision DNA repair protein LBE40_RS05350 PF01555 DNA methylase LBE40_RS05350 PF18755 Restriction Enzyme Adenine Methylase Associated LBE40_RS05355 PF13419 Haloacid dehalogenase-like hydrolase LBE40_RS05375 PF14821 Threonine synthase N terminus LBE40_RS05375 PF00291 Pyridoxal-phosphate dependent enzyme LBE40_RS05380 PF05193 Peptidase M16 inactive domain LBE40_RS05380 PF00675 Insulinase (Peptidase family M16) LBE40_RS05385 PF00990 Diguanylate cyclase, GGDEF domain LBE40_RS05385 PF00498 FHA domain LBE40_RS05385 PF00563 EAL domain LBE40_RS05390 PF02622 Uncharacterized ACR, COG1678 LBE40_RS05400 PF00075 RNase H LBE40_RS05405 PF01636 Phosphotransferase enzyme family LBE40_RS05410 PF02401 LytB protein LBE40_RS05415 PF01040 UbiA prenyltransferase family LBE40_RS05425 PF01523 Putative modulator of DNA gyrase LBE40_RS05430 PF05958 tRNA (Uracil-5-)-methyltransferase LBE40_RS05435 PF01728 FtsJ-like methyltransferase LBE40_RS05435 PF01479 S4 domain LBE40_RS05440 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LBE40_RS05440 PF02779 Transketolase, pyrimidine binding domain LBE40_RS05440 PF02780 Transketolase, C-terminal domain LBE40_RS05445 PF02609 Exonuclease VII small subunit LBE40_RS05450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LBE40_RS05450 PF00925 GTP cyclohydrolase II LBE40_RS05455 PF01264 Chorismate synthase LBE40_RS05465 PF01556 DnaJ C terminal domain LBE40_RS05465 PF00226 DnaJ domain LBE40_RS05470 PF01243 Pyridoxamine 5'-phosphate oxidase LBE40_RS05470 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LBE40_RS05475 PF01040 UbiA prenyltransferase family LBE40_RS05480 PF02843 Phosphoribosylglycinamide synthetase, C domain LBE40_RS05480 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LBE40_RS05480 PF02844 Phosphoribosylglycinamide synthetase, N domain LBE40_RS05490 PF02913 FAD linked oxidases, C-terminal domain LBE40_RS05490 PF01565 FAD binding domain LBE40_RS05495 PF03481 Putative GTP-binding controlling metal-binding LBE40_RS05495 PF01300 Telomere recombination LBE40_RS05500 PF01351 Ribonuclease HII LBE40_RS05505 PF08544 GHMP kinases C terminal LBE40_RS05515 PF06965 Na+/H+ antiporter 1 LBE40_RS05515 PF01343 Peptidase family S49 LBE40_RS05520 PF05175 Methyltransferase small domain LBE40_RS05520 PF08468 Methyltransferase small domain N-terminal LBE40_RS05525 PF00348 Polyprenyl synthetase LBE40_RS05535 PF02091 Glycyl-tRNA synthetase alpha subunit LBE40_RS05540 PF02092 Glycyl-tRNA synthetase beta subunit LBE40_RS05540 PF05746 DALR anticodon binding domain LBE40_RS05545 PF00430 ATP synthase B/B' CF(0) LBE40_RS05550 PF00430 ATP synthase B/B' CF(0) LBE40_RS05555 PF00137 ATP synthase subunit C LBE40_RS05560 PF00119 ATP synthase A chain LBE40_RS05570 PF01926 50S ribosome-binding GTPase LBE40_RS05570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LBE40_RS05580 PF02080 TrkA-C domain LBE40_RS05580 PF03600 Citrate transporter LBE40_RS05590 PF06965 Na+/H+ antiporter 1 LBE40_RS05595 PF13840 ACT domain LBE40_RS05595 PF01842 ACT domain LBE40_RS05595 PF00696 Amino acid kinase family LBE40_RS05615 PF09335 SNARE associated Golgi protein LBE40_RS05640 PF00462 Glutaredoxin LBE40_RS05655 PF00375 Sodium:dicarboxylate symporter family LBE40_RS05665 PF04107 Glutamate-cysteine ligase family 2(GCS2) LBE40_RS05670 PF04452 RNA methyltransferase LBE40_RS05685 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LBE40_RS05685 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LBE40_RS05690 PF00920 Dehydratase family LBE40_RS05695 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LBE40_RS05700 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LBE40_RS05700 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LBE40_RS05705 PF01266 FAD dependent oxidoreductase LBE40_RS05710 PF00120 Glutamine synthetase, catalytic domain LBE40_RS05725 PF04055 Radical SAM superfamily LBE40_RS05725 PF06969 HemN C-terminal domain LBE40_RS05770 PF01180 Dihydroorotate dehydrogenase LBE40_RS05775 PF01741 Large-conductance mechanosensitive channel, MscL LBE40_RS05780 PF13188 PAS domain LBE40_RS05780 PF00989 PAS fold LBE40_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS05780 PF00512 His Kinase A (phospho-acceptor) domain LBE40_RS05785 PF01580 FtsK/SpoIIIE family LBE40_RS05785 PF09397 Ftsk gamma domain LBE40_RS05785 PF17854 FtsK alpha domain LBE40_RS05785 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LBE40_RS05790 PF00171 Aldehyde dehydrogenase family LBE40_RS05795 PF00849 RNA pseudouridylate synthase LBE40_RS05800 PF04545 Sigma-70, region 4 LBE40_RS05800 PF04542 Sigma-70 region 2 LBE40_RS05800 PF00140 Sigma-70 factor, region 1.2 LBE40_RS05810 PF00709 Adenylosuccinate synthetase LBE40_RS05850 PF08346 AntA/AntB antirepressor LBE40_RS05850 PF10548 P22AR C-terminal domain LBE40_RS05970 PF04829 Pre-toxin domain with VENN motif LBE40_RS05970 PF05860 haemagglutination activity domain LBE40_RS05970 PF13332 Hemagglutinin repeat LBE40_RS06000 PF01523 Putative modulator of DNA gyrase LBE40_RS06005 PF00459 Inositol monophosphatase family LBE40_RS06015 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LBE40_RS06020 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LBE40_RS06030 PF08676 MutL C terminal dimerisation domain LBE40_RS06030 PF01119 DNA mismatch repair protein, C-terminal domain LBE40_RS06035 PF00692 dUTPase LBE40_RS06040 PF01070 FMN-dependent dehydrogenase LBE40_RS06045 PF02779 Transketolase, pyrimidine binding domain LBE40_RS06045 PF02780 Transketolase, C-terminal domain LBE40_RS06050 PF00456 Transketolase, thiamine diphosphate binding domain LBE40_RS06060 PF01479 S4 domain LBE40_RS06060 PF00849 RNA pseudouridylate synthase LBE40_RS06065 PF14437 MafB19-like deaminase LBE40_RS06075 PF08264 Anticodon-binding domain of tRNA LBE40_RS06075 PF00133 tRNA synthetases class I (I, L, M and V) LBE40_RS06080 PF13505 Outer membrane protein beta-barrel domain LBE40_RS06085 PF13505 Outer membrane protein beta-barrel domain LBE40_RS06090 PF13505 Outer membrane protein beta-barrel domain LBE40_RS06110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LBE40_RS06110 PF06827 Zinc finger found in FPG and IleRS LBE40_RS06110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LBE40_RS06115 PF02073 Thermophilic metalloprotease (M29) LBE40_RS06125 PF01895 PhoU domain LBE40_RS06130 PF00005 ABC transporter LBE40_RS06135 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS06140 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS06150 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LBE40_RS06150 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LBE40_RS06155 PF00581 Rhodanese-like domain LBE40_RS06155 PF00899 ThiF family LBE40_RS06160 PF00034 Cytochrome c LBE40_RS06165 PF02348 Cytidylyltransferase LBE40_RS06170 PF00800 Prephenate dehydratase LBE40_RS06170 PF01817 Chorismate mutase type II LBE40_RS06195 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LBE40_RS06195 PF12169 DNA polymerase III subunits gamma and tau domain III LBE40_RS06195 PF12170 DNA polymerase III tau subunit V interacting with alpha LBE40_RS06200 PF02575 YbaB/EbfC DNA-binding family LBE40_RS06205 PF02132 RecR protein LBE40_RS06205 PF13662 Toprim domain LBE40_RS06210 PF03601 Conserved hypothetical protein 698 LBE40_RS06215 PF00814 Glycoprotease family LBE40_RS06225 PF04055 Radical SAM superfamily LBE40_RS06225 PF01938 TRAM domain LBE40_RS06225 PF00919 Uncharacterized protein family UPF0004 LBE40_RS06230 PF02562 PhoH-like protein LBE40_RS06235 PF02130 Uncharacterized protein family UPF0054 LBE40_RS06240 PF00571 CBS domain LBE40_RS06240 PF03471 Transporter associated domain LBE40_RS06245 PF00795 Carbon-nitrogen hydrolase LBE40_RS06250 PF01381 Helix-turn-helix LBE40_RS06255 PF00438 S-adenosylmethionine synthetase, N-terminal domain LBE40_RS06255 PF02772 S-adenosylmethionine synthetase, central domain LBE40_RS06255 PF02773 S-adenosylmethionine synthetase, C-terminal domain LBE40_RS06260 PF02390 Putative methyltransferase LBE40_RS06265 PF02576 RimP N-terminal domain LBE40_RS06265 PF17384 RimP C-terminal SH3 domain LBE40_RS06270 PF08529 NusA N-terminal domain LBE40_RS06270 PF00575 S1 RNA binding domain LBE40_RS06270 PF13184 NusA-like KH domain LBE40_RS06280 PF04760 Translation initiation factor IF-2, N-terminal region LBE40_RS06280 PF11987 Translation-initiation factor 2 LBE40_RS06280 PF03144 Elongation factor Tu domain 2 LBE40_RS06280 PF00009 Elongation factor Tu GTP binding domain LBE40_RS06280 PF08364 Bacterial translation initiation factor IF-2 associated region LBE40_RS06285 PF02033 Ribosome-binding factor A LBE40_RS06290 PF01509 TruB family pseudouridylate synthase (N terminal domain) LBE40_RS06290 PF16198 tRNA pseudouridylate synthase B C-terminal domain LBE40_RS06295 PF07690 Major Facilitator Superfamily LBE40_RS06300 PF00312 Ribosomal protein S15 LBE40_RS06305 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LBE40_RS06305 PF01138 3' exoribonuclease family, domain 1 LBE40_RS06305 PF03725 3' exoribonuclease family, domain 2 LBE40_RS06305 PF00575 S1 RNA binding domain LBE40_RS06305 PF00013 KH domain LBE40_RS06310 PF05175 Methyltransferase small domain LBE40_RS06310 PF08468 Methyltransferase small domain N-terminal LBE40_RS06315 PF07724 AAA domain (Cdc48 subfamily) LBE40_RS06315 PF10431 C-terminal, D2-small domain, of ClpB protein LBE40_RS06315 PF00004 ATPase family associated with various cellular activities (AAA) LBE40_RS06320 PF00227 Proteasome subunit LBE40_RS06325 PF00710 Asparaginase, N-terminal LBE40_RS06325 PF17763 Glutaminase/Asparaginase C-terminal domain LBE40_RS06330 PF00485 Phosphoribulokinase / Uridine kinase family LBE40_RS06335 PF00883 Cytosol aminopeptidase family, catalytic domain LBE40_RS06335 PF02789 Cytosol aminopeptidase family, N-terminal domain LBE40_RS06340 PF00877 NlpC/P60 family LBE40_RS06345 PF00293 NUDIX domain LBE40_RS06350 PF01960 ArgJ family LBE40_RS06360 PF07516 SecA Wing and Scaffold domain LBE40_RS06360 PF01043 SecA preprotein cross-linking domain LBE40_RS06360 PF07517 SecA DEAD-like domain LBE40_RS06360 PF02810 SEC-C motif LBE40_RS06365 PF01475 Ferric uptake regulator family LBE40_RS06370 PF00472 RF-1 domain LBE40_RS06370 PF03462 PCRF domain LBE40_RS06375 PF17827 PrmC N-terminal domain LBE40_RS06375 PF05175 Methyltransferase small domain LBE40_RS06380 PF00268 Ribonucleotide reductase, small chain LBE40_RS06385 PF02867 Ribonucleotide reductase, barrel domain LBE40_RS06385 PF00317 Ribonucleotide reductase, all-alpha domain LBE40_RS06385 PF08343 Ribonucleotide reductase N-terminal LBE40_RS06390 PF07972 NrdI Flavodoxin like LBE40_RS06400 PF00005 ABC transporter LBE40_RS06405 PF00950 ABC 3 transport family LBE40_RS06410 PF01297 Zinc-uptake complex component A periplasmic LBE40_RS06415 PF13416 Bacterial extracellular solute-binding protein LBE40_RS06420 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component LBE40_RS06430 PF00005 ABC transporter LBE40_RS06435 PF03009 Glycerophosphoryl diester phosphodiesterase family LBE40_RS06440 PF00117 Glutamine amidotransferase class-I LBE40_RS06440 PF00958 GMP synthase C terminal domain LBE40_RS06440 PF02540 NAD synthase LBE40_RS06445 PF01029 NusB family LBE40_RS06445 PF01189 16S rRNA methyltransferase RsmB/F LBE40_RS06455 PF00478 IMP dehydrogenase / GMP reductase domain LBE40_RS06455 PF00571 CBS domain LBE40_RS06460 PF13091 PLD-like domain LBE40_RS06465 PF00158 Sigma-54 interaction domain LBE40_RS06465 PF00072 Response regulator receiver domain LBE40_RS06465 PF02954 Bacterial regulatory protein, Fis family LBE40_RS06475 PF01380 SIS domain LBE40_RS06475 PF00571 CBS domain LBE40_RS06480 PF00483 Nucleotidyl transferase LBE40_RS06485 PF13406 Transglycosylase SLT domain LBE40_RS06495 PF01432 Peptidase family M3 LBE40_RS06500 PF00571 CBS domain LBE40_RS06500 PF03448 MgtE intracellular N domain LBE40_RS06500 PF01769 Divalent cation transporter LBE40_RS06505 PF03144 Elongation factor Tu domain 2 LBE40_RS06505 PF00009 Elongation factor Tu GTP binding domain LBE40_RS06505 PF00679 Elongation factor G C-terminus LBE40_RS06510 PF00719 Inorganic pyrophosphatase LBE40_RS06515 PF02594 Uncharacterised ACR, YggU family COG1872 LBE40_RS06520 PF02325 YGGT family LBE40_RS06525 PF06776 Invasion associated locus B (IalB) protein LBE40_RS06530 PF00293 NUDIX domain LBE40_RS06535 PF03572 Peptidase family S41 LBE40_RS06535 PF13180 PDZ domain LBE40_RS06545 PF02590 Predicted SPOUT methyltransferase LBE40_RS06555 PF01467 Cytidylyltransferase-like LBE40_RS06560 PF00171 Aldehyde dehydrogenase family LBE40_RS06565 PF00696 Amino acid kinase family LBE40_RS06565 PF01472 PUA domain LBE40_RS06570 PF01018 GTP1/OBG LBE40_RS06570 PF01926 50S ribosome-binding GTPase LBE40_RS06575 PF01728 FtsJ-like methyltransferase LBE40_RS06580 PF02541 Ppx/GppA phosphatase family LBE40_RS06590 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06590 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06590 PF03895 YadA-like membrane anchor domain LBE40_RS06590 PF03895 YadA-like membrane anchor domain LBE40_RS06590 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06590 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06595 PF03895 YadA-like membrane anchor domain LBE40_RS06595 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06595 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06600 PF03895 YadA-like membrane anchor domain LBE40_RS06600 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06600 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06600 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06600 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06600 PF03895 YadA-like membrane anchor domain LBE40_RS06605 PF03895 YadA-like membrane anchor domain LBE40_RS06605 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06605 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06610 PF03895 YadA-like membrane anchor domain LBE40_RS06610 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06610 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06615 PF03895 YadA-like membrane anchor domain LBE40_RS06615 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06615 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06620 PF03895 YadA-like membrane anchor domain LBE40_RS06620 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06620 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06635 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06635 PF05662 Coiled stalk of trimeric autotransporter adhesin LBE40_RS06635 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06635 PF03895 YadA-like membrane anchor domain LBE40_RS06635 PF05658 Head domain of trimeric autotransporter adhesin LBE40_RS06635 PF03895 YadA-like membrane anchor domain LBE40_RS06685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LBE40_RS06685 PF00381 PTS HPr component phosphorylation site LBE40_RS06685 PF02896 PEP-utilising enzyme, TIM barrel domain LBE40_RS06685 PF05524 PEP-utilising enzyme, N-terminal LBE40_RS06685 PF00391 PEP-utilising enzyme, mobile domain LBE40_RS06690 PF01016 Ribosomal L27 protein LBE40_RS06695 PF00829 Ribosomal prokaryotic L21 protein LBE40_RS06705 PF00342 Phosphoglucose isomerase LBE40_RS06710 PF00873 AcrB/AcrD/AcrF family LBE40_RS06725 PF01268 Formate--tetrahydrofolate ligase LBE40_RS06730 PF01165 Ribosomal protein S21 LBE40_RS06745 PF07977 FabA-like domain LBE40_RS06750 PF00109 Beta-ketoacyl synthase, N-terminal domain LBE40_RS06750 PF02801 Beta-ketoacyl synthase, C-terminal domain LBE40_RS06760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LBE40_RS06760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LBE40_RS06765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LBE40_RS06770 PF00510 Cytochrome c oxidase subunit III LBE40_RS06775 PF00115 Cytochrome C and Quinol oxidase polypeptide I LBE40_RS06780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LBE40_RS06780 PF06481 COX Aromatic Rich Motif LBE40_RS06785 PF01220 Dehydroquinase class II LBE40_RS06790 PF02463 RecF/RecN/SMC N terminal domain LBE40_RS06795 PF02768 DNA polymerase III beta subunit, C-terminal domain LBE40_RS06795 PF00712 DNA polymerase III beta subunit, N-terminal domain LBE40_RS06795 PF02767 DNA polymerase III beta subunit, central domain LBE40_RS06800 PF11638 DnaA N-terminal domain LBE40_RS06800 PF08299 Bacterial dnaA protein helix-turn-helix LBE40_RS06800 PF00308 Bacterial dnaA protein LBE40_RS06805 PF01649 Ribosomal protein S20 LBE40_RS06810 PF00330 Aconitase family (aconitate hydratase) LBE40_RS06810 PF00694 Aconitase C-terminal domain LBE40_RS06815 PF00005 ABC transporter LBE40_RS06820 PF03379 CcmB protein LBE40_RS06825 PF01578 Cytochrome C assembly protein LBE40_RS06835 PF08534 Redoxin LBE40_RS06845 PF00202 Aminotransferase class-III LBE40_RS06850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LBE40_RS06850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LBE40_RS06855 PF01430 Hsp33 protein LBE40_RS06870 PF04186 FxsA cytoplasmic membrane protein LBE40_RS06875 PF02556 Preprotein translocase subunit SecB LBE40_RS06880 PF03949 Malic enzyme, NAD binding domain LBE40_RS06880 PF01515 Phosphate acetyl/butaryl transferase LBE40_RS06880 PF00390 Malic enzyme, N-terminal domain LBE40_RS06885 PF05188 MutS domain II LBE40_RS06885 PF00488 MutS domain V LBE40_RS06885 PF05190 MutS family domain IV LBE40_RS06885 PF05192 MutS domain III LBE40_RS06885 PF01624 MutS domain I LBE40_RS06890 PF00920 Dehydratase family LBE40_RS06905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LBE40_RS06910 PF02224 Cytidylate kinase LBE40_RS06915 PF00575 S1 RNA binding domain LBE40_RS06920 PF10091 Putative glucoamylase LBE40_RS06920 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LBE40_RS06920 PF06165 Glycosyltransferase family 36 LBE40_RS06925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LBE40_RS06925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LBE40_RS06930 PF04304 Protein of unknown function (DUF454) LBE40_RS06935 PF00950 ABC 3 transport family LBE40_RS06940 PF00950 ABC 3 transport family LBE40_RS06945 PF00005 ABC transporter LBE40_RS06950 PF01297 Zinc-uptake complex component A periplasmic LBE40_RS06955 PF03483 B3/4 domain LBE40_RS06955 PF03484 tRNA synthetase B5 domain LBE40_RS06955 PF03147 Ferredoxin-fold anticodon binding domain LBE40_RS06955 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LBE40_RS06955 PF01588 Putative tRNA binding domain LBE40_RS06960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LBE40_RS06960 PF01409 tRNA synthetases class II core domain (F) LBE40_RS06965 PF00453 Ribosomal protein L20 LBE40_RS06970 PF01632 Ribosomal protein L35 LBE40_RS06975 PF10576 Iron-sulfur binding domain of endonuclease III LBE40_RS06975 PF00633 Helix-hairpin-helix motif LBE40_RS06975 PF00730 HhH-GPD superfamily base excision DNA repair protein LBE40_RS06980 PF00011 Hsp20/alpha crystallin family LBE40_RS06995 PF02646 RmuC family LBE40_RS07000 PF01327 Polypeptide deformylase LBE40_RS07005 PF02911 Formyl transferase, C-terminal domain LBE40_RS07005 PF00551 Formyl transferase LBE40_RS07010 PF01416 tRNA pseudouridine synthase LBE40_RS07020 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LBE40_RS07020 PF14602 Hexapeptide repeat of succinyl-transferase LBE40_RS07020 PF00132 Bacterial transferase hexapeptide (six repeats) LBE40_RS07025 PF06421 GTP-binding protein LepA C-terminus LBE40_RS07025 PF03144 Elongation factor Tu domain 2 LBE40_RS07025 PF00009 Elongation factor Tu GTP binding domain LBE40_RS07025 PF00679 Elongation factor G C-terminus LBE40_RS07035 PF00696 Amino acid kinase family LBE40_RS07040 PF00226 DnaJ domain LBE40_RS07040 PF00684 DnaJ central domain LBE40_RS07040 PF01556 DnaJ C terminal domain LBE40_RS07045 PF00012 Hsp70 protein LBE40_RS07055 PF01476 LysM domain LBE40_RS07055 PF04972 BON domain LBE40_RS07060 PF00486 Transcriptional regulatory protein, C terminal LBE40_RS07060 PF00072 Response regulator receiver domain LBE40_RS07065 PF13756 Stimulus-sensing domain LBE40_RS07065 PF00512 His Kinase A (phospho-acceptor) domain LBE40_RS07065 PF00672 HAMP domain LBE40_RS07065 PF13755 Sensor N-terminal transmembrane domain LBE40_RS07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS07075 PF03610 PTS system fructose IIA component LBE40_RS07080 PF00381 PTS HPr component phosphorylation site LBE40_RS07090 PF01025 GrpE LBE40_RS07095 PF01628 HrcA protein C terminal domain LBE40_RS07095 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LBE40_RS07100 PF01725 Ham1 family LBE40_RS07105 PF06969 HemN C-terminal domain LBE40_RS07105 PF04055 Radical SAM superfamily LBE40_RS07110 PF01546 Peptidase family M20/M25/M40 LBE40_RS07110 PF07687 Peptidase dimerisation domain LBE40_RS07125 PF05198 Translation initiation factor IF-3, N-terminal domain LBE40_RS07125 PF00707 Translation initiation factor IF-3, C-terminal domain LBE40_RS07130 PF00005 ABC transporter LBE40_RS07130 PF00664 ABC transporter transmembrane region LBE40_RS07140 PF07244 Surface antigen variable number repeat LBE40_RS07140 PF17243 POTRA domain TamA domain 1 LBE40_RS07140 PF01103 Surface antigen LBE40_RS07145 PF13335 Magnesium chelatase, subunit ChlI C-terminal LBE40_RS07145 PF01078 Magnesium chelatase, subunit ChlI LBE40_RS07155 PF01751 Toprim domain LBE40_RS07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS07155 PF00986 DNA gyrase B subunit, carboxyl terminus LBE40_RS07155 PF00204 DNA gyrase B LBE40_RS07160 PF01209 ubiE/COQ5 methyltransferase family LBE40_RS07165 PF03109 ABC1 family LBE40_RS07170 PF04127 DNA / pantothenate metabolism flavoprotein LBE40_RS07170 PF02441 Flavoprotein LBE40_RS07180 PF01039 Carboxyl transferase domain LBE40_RS07185 PF08245 Mur ligase middle domain LBE40_RS07195 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LBE40_RS07195 PF05221 S-adenosyl-L-homocysteine hydrolase LBE40_RS07200 PF00512 His Kinase A (phospho-acceptor) domain LBE40_RS07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LBE40_RS07205 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LBE40_RS07210 PF12705 PD-(D/E)XK nuclease superfamily LBE40_RS07215 PF12705 PD-(D/E)XK nuclease superfamily LBE40_RS07215 PF13361 UvrD-like helicase C-terminal domain LBE40_RS07215 PF00580 UvrD/REP helicase N-terminal domain LBE40_RS07220 PF00085 Thioredoxin LBE40_RS07225 PF16658 Class II release factor RF3, C-terminal domain LBE40_RS07225 PF03144 Elongation factor Tu domain 2 LBE40_RS07225 PF00009 Elongation factor Tu GTP binding domain LBE40_RS07230 PF01921 tRNA synthetases class I (K) LBE40_RS07235 PF00764 Arginosuccinate synthase LBE40_RS07245 PF04055 Radical SAM superfamily LBE40_RS07255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LBE40_RS07260 PF00005 ABC transporter LBE40_RS07275 PF00216 Bacterial DNA-binding protein LBE40_RS07285 PF02926 THUMP domain LBE40_RS07285 PF01170 Putative RNA methylase family UPF0020 LBE40_RS07285 PF10672 S-adenosylmethionine-dependent methyltransferase LBE40_RS07290 PF00588 SpoU rRNA Methylase family LBE40_RS07295 PF01252 Signal peptidase (SPase) II LBE40_RS07300 PF01027 Inhibitor of apoptosis-promoting Bax1 LBE40_RS07310 PF01612 3'-5' exonuclease LBE40_RS07310 PF00476 DNA polymerase family A LBE40_RS07310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LBE40_RS07310 PF01367 5'-3' exonuclease, C-terminal SAM fold LBE40_RS07315 PF00929 Exonuclease LBE40_RS07320 PF01121 Dephospho-CoA kinase LBE40_RS07325 PF01488 Shikimate / quinate 5-dehydrogenase LBE40_RS07325 PF08501 Shikimate dehydrogenase substrate binding domain LBE40_RS07325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LBE40_RS07330 PF02545 Maf-like protein LBE40_RS07335 PF03618 Kinase/pyrophosphorylase LBE40_RS07340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LBE40_RS07340 PF07498 Rho termination factor, N-terminal domain LBE40_RS07340 PF07497 Rho termination factor, RNA-binding domain LBE40_RS07345 PF12631 MnmE helical domain LBE40_RS07345 PF10396 GTP-binding protein TrmE N-terminus LBE40_RS07345 PF01926 50S ribosome-binding GTPase LBE40_RS07350 PF01134 Glucose inhibited division protein A LBE40_RS07350 PF13932 GidA associated domain LBE40_RS07355 PF02527 rRNA small subunit methyltransferase G LBE40_RS07360 PF13614 AAA domain LBE40_RS07365 PF17762 HTH domain found in ParB protein LBE40_RS07365 PF02195 ParB-like nuclease domain LBE40_RS07380 PF00753 Metallo-beta-lactamase superfamily LBE40_RS07380 PF16123 Hydroxyacylglutathione hydrolase C-terminus LBE40_RS07385 PF04279 Intracellular septation protein A LBE40_RS07390 PF02881 SRP54-type protein, helical bundle domain LBE40_RS07390 PF00448 SRP54-type protein, GTPase domain LBE40_RS07395 PF00919 Uncharacterized protein family UPF0004 LBE40_RS07395 PF04055 Radical SAM superfamily LBE40_RS07400 PF01678 Diaminopimelate epimerase LBE40_RS07405 PF02974 Protease inhibitor Inh LBE40_RS07410 PF03969 AFG1-like ATPase LBE40_RS07415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LBE40_RS07415 PF00056 lactate/malate dehydrogenase, NAD binding domain LBE40_RS07420 PF08442 ATP-grasp domain LBE40_RS07420 PF00549 CoA-ligase LBE40_RS07425 PF02629 CoA binding domain LBE40_RS07425 PF00549 CoA-ligase LBE40_RS07430 PF16870 2-oxoglutarate dehydrogenase C-terminal LBE40_RS07430 PF16078 2-oxoglutarate dehydrogenase N-terminus LBE40_RS07430 PF00676 Dehydrogenase E1 component LBE40_RS07430 PF02779 Transketolase, pyrimidine binding domain LBE40_RS07435 PF02817 e3 binding domain LBE40_RS07435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LBE40_RS07435 PF00364 Biotin-requiring enzyme LBE40_RS07440 PF07992 Pyridine nucleotide-disulphide oxidoreductase LBE40_RS07440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LBE40_RS07445 PF16653 Saccharopine dehydrogenase C-terminal domain LBE40_RS07445 PF03435 Saccharopine dehydrogenase NADP binding domain LBE40_RS07450 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LBE40_RS07460 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LBE40_RS07460 PF13244 Domain of unknown function (DUF4040) LBE40_RS07460 PF00361 Proton-conducting membrane transporter LBE40_RS07460 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LBE40_RS07465 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LBE40_RS07470 PF00361 Proton-conducting membrane transporter LBE40_RS07475 PF01899 Na+/H+ ion antiporter subunit LBE40_RS07480 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LBE40_RS07485 PF03334 Na+/H+ antiporter subunit LBE40_RS07490 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme LBE40_RS07505 PF01761 3-dehydroquinate synthase LBE40_RS07510 PF01202 Shikimate kinase LBE40_RS07520 PF02899 Phage integrase, N-terminal SAM-like domain LBE40_RS07520 PF00589 Phage integrase family LBE40_RS07525 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LBE40_RS07530 PF03734 L,D-transpeptidase catalytic domain LBE40_RS07535 PF02492 CobW/HypB/UreG, nucleotide-binding domain LBE40_RS07535 PF07683 Cobalamin synthesis protein cobW C-terminal domain LBE40_RS07540 PF07943 Penicillin-binding protein 5, C-terminal domain LBE40_RS07540 PF00768 D-alanyl-D-alanine carboxypeptidase LBE40_RS07550 PF08543 Phosphomethylpyrimidine kinase LBE40_RS07555 PF03358 NADPH-dependent FMN reductase LBE40_RS07575 PF00005 ABC transporter LBE40_RS07585 PF02153 Prephenate dehydrogenase LBE40_RS07595 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LBE40_RS07600 PF00085 Thioredoxin LBE40_RS07605 PF00206 Lyase LBE40_RS07605 PF14698 Argininosuccinate lyase C-terminal LBE40_RS07615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LBE40_RS07615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LBE40_RS07630 PF00486 Transcriptional regulatory protein, C terminal LBE40_RS07630 PF00072 Response regulator receiver domain LBE40_RS07640 PF00814 Glycoprotease family LBE40_RS07655 PF00117 Glutamine amidotransferase class-I LBE40_RS07665 PF05088 Bacterial NAD-glutamate dehydrogenase LBE40_RS07670 PF00484 Carbonic anhydrase LBE40_RS07675 PF02978 Signal peptide binding domain LBE40_RS07675 PF02881 SRP54-type protein, helical bundle domain LBE40_RS07675 PF00448 SRP54-type protein, GTPase domain LBE40_RS07685 PF00886 Ribosomal protein S16 LBE40_RS07690 PF07896 Protein of unknown function (DUF1674) LBE40_RS07695 PF01435 Peptidase family M48 LBE40_RS07700 PF01029 NusB family LBE40_RS07700 PF01189 16S rRNA methyltransferase RsmB/F LBE40_RS07710 PF01808 AICARFT/IMPCHase bienzyme LBE40_RS07710 PF02142 MGS-like domain LBE40_RS07725 PF00830 Ribosomal L28 family LBE40_RS07735 PF11775 Cobalamin biosynthesis protein CobT VWA domain LBE40_RS07735 PF06213 Cobalamin biosynthesis protein CobT LBE40_RS07740 PF07728 AAA domain (dynein-related subfamily) LBE40_RS07740 PF12556 Cobaltochelatase CobS subunit N terminal LBE40_RS07740 PF08406 CbbQ/NirQ/NorQ C-terminal LBE40_RS07745 PF00226 DnaJ domain LBE40_RS07750 PF01722 BolA-like protein LBE40_RS07755 PF00589 Phage integrase family LBE40_RS07755 PF02899 Phage integrase, N-terminal SAM-like domain LBE40_RS07765 PF05239 PRC-barrel domain LBE40_RS07765 PF01782 RimM N-terminal domain LBE40_RS07770 PF01746 tRNA (Guanine-1)-methyltransferase LBE40_RS07775 PF01245 Ribosomal protein L19 LBE40_RS07790 PF00890 FAD binding domain LBE40_RS07790 PF02910 Fumarate reductase flavoprotein C-term LBE40_RS07795 PF13085 2Fe-2S iron-sulfur cluster binding domain LBE40_RS07795 PF13237 4Fe-4S dicluster domain LBE40_RS07800 PF00437 Type II/IV secretion system protein LBE40_RS07805 PF03743 Bacterial conjugation TrbI-like protein LBE40_RS07810 PF03524 Conjugal transfer protein LBE40_RS07815 PF04335 VirB8 protein LBE40_RS07825 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LBE40_RS07840 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LBE40_RS07855 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LBE40_RS07870 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LBE40_RS07885 PF04610 TrbL/VirB6 plasmid conjugal transfer protein LBE40_RS07895 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LBE40_RS07900 PF05101 Type IV secretory pathway, VirB3-like protein LBE40_RS07965 PF01494 FAD binding domain LBE40_RS07970 PF09397 Ftsk gamma domain LBE40_RS07970 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LBE40_RS07970 PF17854 FtsK alpha domain LBE40_RS07970 PF01580 FtsK/SpoIIIE family LBE40_RS07985 PF02321 Outer membrane efflux protein LBE40_RS07990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LBE40_RS07995 PF12704 MacB-like periplasmic core domain LBE40_RS07995 PF02687 FtsX-like permease family LBE40_RS07995 PF00005 ABC transporter LBE40_RS08010 PF00005 ABC transporter LBE40_RS08015 PF00501 AMP-binding enzyme LBE40_RS08015 PF13193 AMP-binding enzyme C-terminal domain LBE40_RS08015 PF16177 Acetyl-coenzyme A synthetase N-terminus LBE40_RS08045 PF01168 Alanine racemase, N-terminal domain LBE40_RS08050 PF13603 Leucyl-tRNA synthetase, Domain 2 LBE40_RS08050 PF00133 tRNA synthetases class I (I, L, M and V) LBE40_RS08050 PF08264 Anticodon-binding domain of tRNA LBE40_RS08060 PF00923 Transaldolase/Fructose-6-phosphate aldolase LBE40_RS08065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LBE40_RS08065 PF18074 Primosomal protein N C-terminal domain LBE40_RS08065 PF00270 DEAD/DEAH box helicase LBE40_RS08065 PF17764 3′ DNA-binding domain (3′BD) LBE40_RS08070 PF00213 ATP synthase delta (OSCP) subunit LBE40_RS08075 PF00306 ATP synthase alpha/beta chain, C terminal domain LBE40_RS08075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LBE40_RS08075 PF02874 ATP synthase alpha/beta family, beta-barrel domain LBE40_RS08080 PF00231 ATP synthase LBE40_RS08085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LBE40_RS08085 PF02874 ATP synthase alpha/beta family, beta-barrel domain LBE40_RS08090 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LBE40_RS08100 PF00529 HlyD membrane-fusion protein of T1SS LBE40_RS08100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LBE40_RS08110 PF04551 GcpE protein LBE40_RS08130 PF00899 ThiF family LBE40_RS08130 PF00581 Rhodanese-like domain LBE40_RS08145 PF00348 Polyprenyl synthetase LBE40_RS08150 PF01783 Ribosomal L32p protein family LBE40_RS08160 PF00037 4Fe-4S binding domain LBE40_RS08160 PF11953 Domain of unknown function (DUF3470) LBE40_RS08170 PF00140 Sigma-70 factor, region 1.2 LBE40_RS08170 PF04542 Sigma-70 region 2 LBE40_RS08170 PF04545 Sigma-70, region 4 LBE40_RS08175 PF01435 Peptidase family M48 LBE40_RS08190 PF16326 ABC transporter C-terminal domain LBE40_RS08190 PF00005 ABC transporter LBE40_RS08195 PF13302 Acetyltransferase (GNAT) domain LBE40_RS08200 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) LBE40_RS08210 PF00224 Pyruvate kinase, barrel domain LBE40_RS08210 PF02887 Pyruvate kinase, alpha/beta domain LBE40_RS08225 PF02779 Transketolase, pyrimidine binding domain LBE40_RS08225 PF00456 Transketolase, thiamine diphosphate binding domain LBE40_RS08225 PF02780 Transketolase, C-terminal domain LBE40_RS08230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LBE40_RS08230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LBE40_RS08235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LBE40_RS08235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LBE40_RS08240 PF00162 Phosphoglycerate kinase LBE40_RS08245 PF00274 Fructose-bisphosphate aldolase class-I LBE40_RS08250 PF01197 Ribosomal protein L31 LBE40_RS08255 PF00664 ABC transporter transmembrane region LBE40_RS08255 PF00005 ABC transporter LBE40_RS08265 PF00459 Inositol monophosphatase family LBE40_RS08270 PF09285 Elongation factor P, C-terminal LBE40_RS08270 PF08207 Elongation factor P (EF-P) KOW-like domain LBE40_RS08270 PF01132 Elongation factor P (EF-P) OB domain LBE40_RS08285 PF01381 Helix-turn-helix LBE40_RS08310 PF02075 Crossover junction endodeoxyribonuclease RuvC LBE40_RS08320 PF07499 RuvA, C-terminal domain LBE40_RS08320 PF01330 RuvA N terminal domain LBE40_RS08325 PF05496 Holliday junction DNA helicase RuvB P-loop domain LBE40_RS08325 PF17864 RuvB AAA lid domain LBE40_RS08325 PF05491 RuvB C-terminal winged helix domain LBE40_RS08330 PF03061 Thioesterase superfamily LBE40_RS08335 PF01618 MotA/TolQ/ExbB proton channel family LBE40_RS08340 PF02472 Biopolymer transport protein ExbD/TolR LBE40_RS08350 PF07676 WD40-like Beta Propeller Repeat LBE40_RS08350 PF04052 TolB amino-terminal domain