locus-tag class description BD_RS00005 PF00308 Bacterial dnaA protein BD_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix BD_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BD_RS00010 PF02767 DNA polymerase III beta subunit, central domain BD_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BD_RS00015 PF02463 RecF/RecN/SMC N terminal domain BD_RS00020 PF00204 DNA gyrase B BD_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus BD_RS00020 PF18053 DNA gyrase B subunit insert domain BD_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS00020 PF01751 Toprim domain BD_RS00025 PF03989 DNA gyrase C-terminal domain, beta-propeller BD_RS00025 PF00521 DNA gyrase/topoisomerase IV, subunit A BD_RS00045 PF00119 ATP synthase A chain BD_RS00050 PF00137 ATP synthase subunit C BD_RS00065 PF07739 TipAS antibiotic-recognition domain BD_RS00065 PF13411 MerR HTH family regulatory protein BD_RS00070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD_RS00070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD_RS00070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD_RS00070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD_RS00075 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BD_RS00080 PF09312 SurA N-terminal domain BD_RS00080 PF00639 PPIC-type PPIASE domain BD_RS00090 PF00639 PPIC-type PPIASE domain BD_RS00100 PF00766 Electron transfer flavoprotein FAD-binding domain BD_RS00100 PF01012 Electron transfer flavoprotein domain BD_RS00105 PF01012 Electron transfer flavoprotein domain BD_RS00115 PF00890 FAD binding domain BD_RS00115 PF02910 Fumarate reductase flavoprotein C-term BD_RS00130 PF00082 Subtilase family BD_RS00135 PF00364 Biotin-requiring enzyme BD_RS00135 PF00561 alpha/beta hydrolase fold BD_RS00140 PF03704 Bacterial transcriptional activator domain BD_RS00140 PF00498 FHA domain BD_RS00140 PF00486 Transcriptional regulatory protein, C terminal BD_RS00145 PF01250 Ribosomal protein S6 BD_RS00155 PF03948 Ribosomal protein L9, C-terminal domain BD_RS00155 PF01281 Ribosomal protein L9, N-terminal domain BD_RS00175 PF00772 DnaB-like helicase N terminal domain BD_RS00175 PF03796 DnaB-like helicase C terminal domain BD_RS00180 PF02954 Bacterial regulatory protein, Fis family BD_RS00180 PF00072 Response regulator receiver domain BD_RS00180 PF00158 Sigma-54 interaction domain BD_RS00185 PF04055 Radical SAM superfamily BD_RS00190 PF09397 Ftsk gamma domain BD_RS00190 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BD_RS00190 PF01580 FtsK/SpoIIIE family BD_RS00190 PF17854 FtsK alpha domain BD_RS00210 PF01678 Diaminopimelate epimerase BD_RS00215 PF00701 Dihydrodipicolinate synthetase family BD_RS00220 PF01113 Dihydrodipicolinate reductase, N-terminus BD_RS00220 PF05173 Dihydrodipicolinate reductase, C-terminus BD_RS00230 PF00923 Transaldolase/Fructose-6-phosphate aldolase BD_RS00245 PF02875 Mur ligase family, glutamate ligase domain BD_RS00245 PF08245 Mur ligase middle domain BD_RS00265 PF12826 Helix-hairpin-helix motif BD_RS00265 PF00533 BRCA1 C Terminus (BRCT) domain BD_RS00265 PF01653 NAD-dependent DNA ligase adenylation domain BD_RS00265 PF03120 NAD-dependent DNA ligase OB-fold domain BD_RS00265 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BD_RS00270 PF02686 Glu-tRNAGln amidotransferase C subunit BD_RS00275 PF01425 Amidase BD_RS00280 PF02934 GatB/GatE catalytic domain BD_RS00280 PF02637 GatB domain BD_RS00285 PF02541 Ppx/GppA phosphatase family BD_RS00305 PF07497 Rho termination factor, RNA-binding domain BD_RS00305 PF07498 Rho termination factor, N-terminal domain BD_RS00305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD_RS00315 PF01197 Ribosomal protein L31 BD_RS00320 PF03462 PCRF domain BD_RS00320 PF00472 RF-1 domain BD_RS00325 PF05175 Methyltransferase small domain BD_RS00325 PF17827 PrmC N-terminal domain BD_RS00330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BD_RS00360 PF02403 Seryl-tRNA synthetase N-terminal domain BD_RS00360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD_RS00375 PF09335 SNARE associated Golgi protein BD_RS00400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD_RS00410 PF14489 QueF-like protein BD_RS00475 PF00166 Chaperonin 10 Kd subunit BD_RS00480 PF00118 TCP-1/cpn60 chaperonin family BD_RS00495 PF00072 Response regulator receiver domain BD_RS00525 PF00437 Type II/IV secretion system protein BD_RS00570 PF00672 HAMP domain BD_RS00570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS00570 PF02203 Tar ligand binding domain homologue BD_RS00575 PF00156 Phosphoribosyl transferase domain BD_RS00575 PF01171 PP-loop family BD_RS00575 PF11734 TilS substrate C-terminal domain BD_RS00585 PF13525 Outer membrane lipoprotein BD_RS00595 PF00202 Aminotransferase class-III BD_RS00600 PF07687 Peptidase dimerisation domain BD_RS00600 PF01546 Peptidase family M20/M25/M40 BD_RS00605 PF04958 Arginine N-succinyltransferase beta subunit BD_RS00610 PF00171 Aldehyde dehydrogenase family BD_RS00615 PF02618 YceG-like family BD_RS00625 PF00696 Amino acid kinase family BD_RS00625 PF01842 ACT domain BD_RS00630 PF00881 Nitroreductase family BD_RS00635 PF01207 Dihydrouridine synthase (Dus) BD_RS00640 PF03144 Elongation factor Tu domain 2 BD_RS00640 PF00009 Elongation factor Tu GTP binding domain BD_RS00640 PF00679 Elongation factor G C-terminus BD_RS00640 PF14492 Elongation Factor G, domain II BD_RS00645 PF00005 ABC transporter BD_RS00660 PF00912 Transglycosylase BD_RS00665 PF16363 GDP-mannose 4,6 dehydratase BD_RS00670 PF01569 PAP2 superfamily BD_RS00675 PF01618 MotA/TolQ/ExbB proton channel family BD_RS00680 PF13677 Membrane MotB of proton-channel complex MotA/MotB BD_RS00680 PF00691 OmpA family BD_RS00685 PF00933 Glycosyl hydrolase family 3 N terminal domain BD_RS00685 PF01915 Glycosyl hydrolase family 3 C-terminal domain BD_RS00710 PF07075 Protein of unknown function (DUF1343) BD_RS00715 PF00483 Nucleotidyl transferase BD_RS00715 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS00720 PF01636 Phosphotransferase enzyme family BD_RS00730 PF01590 GAF domain BD_RS00730 PF02954 Bacterial regulatory protein, Fis family BD_RS00730 PF00158 Sigma-54 interaction domain BD_RS00735 PF00924 Mechanosensitive ion channel BD_RS00740 PF00005 ABC transporter BD_RS00740 PF00664 ABC transporter transmembrane region BD_RS00745 PF17760 UvrA interaction domain BD_RS00745 PF00005 ABC transporter BD_RS00745 PF17755 UvrA DNA-binding domain BD_RS00750 PF17092 Penicillin-binding protein OB-like domain BD_RS00750 PF00912 Transglycosylase BD_RS00750 PF00905 Penicillin binding protein transpeptidase domain BD_RS00760 PF01741 Large-conductance mechanosensitive channel, MscL BD_RS00775 PF00005 ABC transporter BD_RS00780 PF02687 FtsX-like permease family BD_RS00780 PF18075 FtsX extracellular domain BD_RS00790 PF03572 Peptidase family S41 BD_RS00790 PF13180 PDZ domain BD_RS00810 PF00085 Thioredoxin BD_RS00820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BD_RS00825 PF08335 GlnD PII-uridylyltransferase BD_RS00825 PF03710 Glutamate-ammonia ligase adenylyltransferase BD_RS00830 PF07676 WD40-like Beta Propeller Repeat BD_RS00830 PF04052 TolB amino-terminal domain BD_RS00840 PF02472 Biopolymer transport protein ExbD/TolR BD_RS00845 PF01618 MotA/TolQ/ExbB proton channel family BD_RS00860 PF01458 Uncharacterized protein family (UPF0051) BD_RS00865 PF00005 ABC transporter BD_RS00870 PF01458 Uncharacterized protein family (UPF0051) BD_RS00875 PF00266 Aminotransferase class-V BD_RS00880 PF01592 NifU-like N terminal domain BD_RS00880 PF01106 NifU-like domain BD_RS00880 PF04324 BFD-like [2Fe-2S] binding domain BD_RS00910 PF13742 OB-fold nucleic acid binding domain BD_RS00910 PF02601 Exonuclease VII, large subunit BD_RS00915 PF02609 Exonuclease VII small subunit BD_RS00920 PF00348 Polyprenyl synthetase BD_RS00925 PF01479 S4 domain BD_RS00925 PF01728 FtsJ-like methyltransferase BD_RS00935 PF05195 Aminopeptidase P, N-terminal domain BD_RS00935 PF00557 Metallopeptidase family M24 BD_RS00960 PF01266 FAD dependent oxidoreductase BD_RS00960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BD_RS00990 PF08447 PAS fold BD_RS00990 PF08448 PAS fold BD_RS00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS01000 PF04002 RadC-like JAB domain BD_RS01020 PF07879 PHB/PHA accumulation regulator DNA-binding domain BD_RS01020 PF05233 PHB accumulation regulatory domain BD_RS01045 PF08298 PrkA AAA domain BD_RS01045 PF06798 PrkA serine protein kinase C-terminal domain BD_RS01050 PF04285 Protein of unknown function (DUF444) BD_RS01055 PF04293 SpoVR like protein BD_RS01060 PF01253 Translation initiation factor SUI1 BD_RS01065 PF00072 Response regulator receiver domain BD_RS01065 PF00486 Transcriptional regulatory protein, C terminal BD_RS01070 PF07722 Peptidase C26 BD_RS01075 PF00271 Helicase conserved C-terminal domain BD_RS01075 PF00270 DEAD/DEAH box helicase BD_RS01080 PF14437 MafB19-like deaminase BD_RS01085 PF03741 Integral membrane protein TerC family BD_RS01095 PF01165 Ribosomal protein S21 BD_RS01105 PF10410 DnaB-helicase binding domain of primase BD_RS01105 PF01807 CHC2 zinc finger BD_RS01105 PF08275 DNA primase catalytic core, N-terminal domain BD_RS01110 PF00140 Sigma-70 factor, region 1.2 BD_RS01110 PF04546 Sigma-70, non-essential region BD_RS01110 PF04542 Sigma-70 region 2 BD_RS01110 PF04545 Sigma-70, region 4 BD_RS01110 PF04539 Sigma-70 region 3 BD_RS01110 PF03979 Sigma-70 factor, region 1.1 BD_RS01130 PF02667 Short chain fatty acid transporter BD_RS01165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BD_RS01165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BD_RS01170 PF02805 Metal binding domain of Ada BD_RS01170 PF00730 HhH-GPD superfamily base excision DNA repair protein BD_RS01170 PF06029 AlkA N-terminal domain BD_RS01170 PF12833 Helix-turn-helix domain BD_RS01175 PF02151 UvrB/uvrC motif BD_RS01175 PF08459 UvrC Helix-hairpin-helix N-terminal BD_RS01175 PF01541 GIY-YIG catalytic domain BD_RS01230 PF01597 Glycine cleavage H-protein BD_RS01235 PF03951 Glutamine synthetase, beta-Grasp domain BD_RS01235 PF00120 Glutamine synthetase, catalytic domain BD_RS01240 PF00543 Nitrogen regulatory protein P-II BD_RS01250 PF00588 SpoU rRNA Methylase family BD_RS01255 PF01043 SecA preprotein cross-linking domain BD_RS01255 PF07516 SecA Wing and Scaffold domain BD_RS01255 PF07517 SecA DEAD-like domain BD_RS01270 PF04355 SmpA / OmlA family BD_RS01290 PF13193 AMP-binding enzyme C-terminal domain BD_RS01290 PF00501 AMP-binding enzyme BD_RS01295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD_RS01295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD_RS01325 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BD_RS01325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BD_RS01330 PF00115 Cytochrome C and Quinol oxidase polypeptide I BD_RS01335 PF00510 Cytochrome c oxidase subunit III BD_RS01345 PF01040 UbiA prenyltransferase family BD_RS01350 PF13417 Glutathione S-transferase, N-terminal domain BD_RS01370 PF00080 Copper/zinc superoxide dismutase (SODC) BD_RS01375 PF00207 Alpha-2-macroglobulin family BD_RS01375 PF07703 Alpha-2-macroglobulin bait region domain BD_RS01375 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BD_RS01375 PF01835 MG2 domain BD_RS01380 PF00905 Penicillin binding protein transpeptidase domain BD_RS01380 PF14814 Bifunctional transglycosylase second domain BD_RS01380 PF00912 Transglycosylase BD_RS01390 PF00158 Sigma-54 interaction domain BD_RS01390 PF00072 Response regulator receiver domain BD_RS01390 PF02954 Bacterial regulatory protein, Fis family BD_RS01395 PF00072 Response regulator receiver domain BD_RS01395 PF00512 His Kinase A (phospho-acceptor) domain BD_RS01395 PF09308 LuxQ, periplasmic BD_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS01410 PF01272 Transcription elongation factor, GreA/GreB, C-term BD_RS01410 PF14760 Rnk N-terminus BD_RS01420 PF08240 Alcohol dehydrogenase GroES-like domain BD_RS01420 PF00107 Zinc-binding dehydrogenase BD_RS01440 PF02678 Pirin BD_RS01440 PF05726 Pirin C-terminal cupin domain BD_RS01450 PF03594 Benzoate membrane transport protein BD_RS01455 PF02527 rRNA small subunit methyltransferase G BD_RS01465 PF08534 Redoxin BD_RS01470 PF00270 DEAD/DEAH box helicase BD_RS01470 PF00271 Helicase conserved C-terminal domain BD_RS01490 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BD_RS01495 PF01176 Translation initiation factor 1A / IF-1 BD_RS01500 PF01266 FAD dependent oxidoreductase BD_RS01510 PF00270 DEAD/DEAH box helicase BD_RS01510 PF00271 Helicase conserved C-terminal domain BD_RS01520 PF00255 Glutathione peroxidase BD_RS01525 PF00106 short chain dehydrogenase BD_RS01550 PF02797 Chalcone and stilbene synthases, C-terminal domain BD_RS01550 PF00195 Chalcone and stilbene synthases, N-terminal domain BD_RS01560 PF07690 Major Facilitator Superfamily BD_RS01580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD_RS01585 PF04461 Protein of unknown function (DUF520) BD_RS01590 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BD_RS01595 PF13472 GDSL-like Lipase/Acylhydrolase family BD_RS01600 PF00005 ABC transporter BD_RS01610 PF03481 Putative GTP-binding controlling metal-binding BD_RS01610 PF01300 Telomere recombination BD_RS01630 PF01553 Acyltransferase BD_RS01635 PF00817 impB/mucB/samB family BD_RS01635 PF11798 IMS family HHH motif BD_RS01640 PF03960 ArsC family BD_RS01645 PF00491 Arginase family BD_RS01650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD_RS01655 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS01660 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS01660 PF12911 N-terminal TM domain of oligopeptide transport permease C BD_RS01675 PF17810 Arginine decarboxylase helical bundle domain BD_RS01675 PF17944 Arginine decarboxylase C-terminal helical extension BD_RS01675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BD_RS01680 PF09334 tRNA synthetases class I (M) BD_RS01680 PF00133 tRNA synthetases class I (I, L, M and V) BD_RS01680 PF13603 Leucyl-tRNA synthetase, Domain 2 BD_RS01680 PF08264 Anticodon-binding domain of tRNA BD_RS01685 PF00072 Response regulator receiver domain BD_RS01685 PF00990 Diguanylate cyclase, GGDEF domain BD_RS01690 PF01545 Cation efflux family BD_RS01690 PF16916 Dimerisation domain of Zinc Transporter BD_RS01695 PF02390 Putative methyltransferase BD_RS01710 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD_RS01715 PF00486 Transcriptional regulatory protein, C terminal BD_RS01715 PF00072 Response regulator receiver domain BD_RS01725 PF00082 Subtilase family BD_RS01725 PF01483 Proprotein convertase P-domain BD_RS01740 PF13419 Haloacid dehalogenase-like hydrolase BD_RS01745 PF00691 OmpA family BD_RS01745 PF01389 OmpA-like transmembrane domain BD_RS01765 PF14579 Helix-hairpin-helix motif BD_RS01765 PF02811 PHP domain BD_RS01765 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD_RS01765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD_RS01790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BD_RS01790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BD_RS01815 PF00456 Transketolase, thiamine diphosphate binding domain BD_RS01815 PF17831 Pyruvate dehydrogenase E1 component middle domain BD_RS01825 PF07690 Major Facilitator Superfamily BD_RS01840 PF01476 LysM domain BD_RS01840 PF08525 Opacity-associated protein A N-terminal motif BD_RS01840 PF01551 Peptidase family M23 BD_RS01860 PF00108 Thiolase, N-terminal domain BD_RS01860 PF02803 Thiolase, C-terminal domain BD_RS01865 PF00106 short chain dehydrogenase BD_RS01875 PF01966 HD domain BD_RS01880 PF00669 Bacterial flagellin N-terminal helical region BD_RS01880 PF00700 Bacterial flagellin C-terminal helical region BD_RS01885 PF00700 Bacterial flagellin C-terminal helical region BD_RS01885 PF00669 Bacterial flagellin N-terminal helical region BD_RS01935 PF02472 Biopolymer transport protein ExbD/TolR BD_RS01940 PF01618 MotA/TolQ/ExbB proton channel family BD_RS01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS01945 PF03466 LysR substrate binding domain BD_RS01950 PF03109 ABC1 family BD_RS01955 PF17876 Cold shock domain BD_RS01955 PF00575 S1 RNA binding domain BD_RS01955 PF00773 RNB domain BD_RS01955 PF08206 Ribonuclease B OB domain BD_RS01955 PF08461 Ribonuclease R winged-helix domain BD_RS01970 PF00072 Response regulator receiver domain BD_RS01970 PF00486 Transcriptional regulatory protein, C terminal BD_RS01980 PF00892 EamA-like transporter family BD_RS01995 PF00144 Beta-lactamase BD_RS02025 PF02653 Branched-chain amino acid transport system / permease component BD_RS02030 PF02653 Branched-chain amino acid transport system / permease component BD_RS02035 PF00005 ABC transporter BD_RS02040 PF02608 ABC transporter substrate-binding protein PnrA-like BD_RS02045 PF13545 Crp-like helix-turn-helix domain BD_RS02045 PF00027 Cyclic nucleotide-binding domain BD_RS02050 PF00398 Ribosomal RNA adenine dimethylase BD_RS02055 PF13091 PLD-like domain BD_RS02070 PF18389 TrmO C-terminal domain BD_RS02070 PF01980 tRNA-methyltransferase O BD_RS02100 PF08264 Anticodon-binding domain of tRNA BD_RS02100 PF00133 tRNA synthetases class I (I, L, M and V) BD_RS02100 PF10458 Valyl tRNA synthetase tRNA binding arm BD_RS02115 PF07690 Major Facilitator Superfamily BD_RS02125 PF02594 Uncharacterised ACR, YggU family COG1872 BD_RS02135 PF03807 NADP oxidoreductase coenzyme F420-dependent BD_RS02135 PF14748 Pyrroline-5-carboxylate reductase dimerisation BD_RS02140 PF01168 Alanine racemase, N-terminal domain BD_RS02150 PF01522 Polysaccharide deacetylase BD_RS02150 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BD_RS02155 PF02545 Maf-like protein BD_RS02180 PF00498 FHA domain BD_RS02195 PF01618 MotA/TolQ/ExbB proton channel family BD_RS02200 PF02472 Biopolymer transport protein ExbD/TolR BD_RS02220 PF01066 CDP-alcohol phosphatidyltransferase BD_RS02225 PF01118 Semialdehyde dehydrogenase, NAD binding domain BD_RS02225 PF02774 Semialdehyde dehydrogenase, dimerisation domain BD_RS02255 PF01416 tRNA pseudouridine synthase BD_RS02260 PF00572 Ribosomal protein L13 BD_RS02265 PF00380 Ribosomal protein S9/S16 BD_RS02290 PF00512 His Kinase A (phospho-acceptor) domain BD_RS02290 PF00072 Response regulator receiver domain BD_RS02290 PF01627 Hpt domain BD_RS02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS02300 PF02272 DHHA1 domain BD_RS02300 PF01411 tRNA synthetases class II (A) BD_RS02300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD_RS02310 PF00149 Calcineurin-like phosphoesterase BD_RS02315 PF13193 AMP-binding enzyme C-terminal domain BD_RS02315 PF00501 AMP-binding enzyme BD_RS02330 PF00579 tRNA synthetases class I (W and Y) BD_RS02340 PF04608 Phosphatidylglycerophosphatase A BD_RS02345 PF00994 Probable molybdopterin binding domain BD_RS02345 PF18146 Damage-inducible protein CinA KH domain BD_RS02345 PF02464 Competence-damaged protein BD_RS02350 PF00154 recA bacterial DNA recombination protein BD_RS02360 PF04343 Protein of unknown function, DUF488 BD_RS02370 PF02611 CDP-diacylglycerol pyrophosphatase BD_RS02390 PF00255 Glutathione peroxidase BD_RS02410 PF01842 ACT domain BD_RS02410 PF00696 Amino acid kinase family BD_RS02410 PF13840 ACT domain BD_RS02415 PF01464 Transglycosylase SLT domain BD_RS02415 PF01476 LysM domain BD_RS02420 PF00460 Flagella basal body rod protein BD_RS02420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD_RS02425 PF00460 Flagella basal body rod protein BD_RS02425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD_RS02430 PF13144 Chaperone for flagella basal body P-ring formation BD_RS02440 PF02119 Flagellar P-ring protein BD_RS02465 PF00460 Flagella basal body rod protein BD_RS02465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD_RS02475 PF02599 Global regulator protein family BD_RS02480 PF02623 FliW protein BD_RS02490 PF02646 RmuC family BD_RS02495 PF01040 UbiA prenyltransferase family BD_RS02505 PF13193 AMP-binding enzyme C-terminal domain BD_RS02505 PF00501 AMP-binding enzyme BD_RS02540 PF00348 Polyprenyl synthetase BD_RS02550 PF04445 Putative SAM-dependent methyltransferase BD_RS02565 PF00285 Citrate synthase, C-terminal domain BD_RS02570 PF00089 Trypsin BD_RS02590 PF00486 Transcriptional regulatory protein, C terminal BD_RS02590 PF00072 Response regulator receiver domain BD_RS02595 PF01230 HIT domain BD_RS02600 PF00719 Inorganic pyrophosphatase BD_RS02610 PF03060 Nitronate monooxygenase BD_RS02630 PF01627 Hpt domain BD_RS02630 PF00072 Response regulator receiver domain BD_RS02630 PF01584 CheW-like domain BD_RS02630 PF02895 Signal transducing histidine kinase, homodimeric domain BD_RS02630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS02635 PF01584 CheW-like domain BD_RS02640 PF01339 CheB methylesterase BD_RS02640 PF00072 Response regulator receiver domain BD_RS02645 PF00171 Aldehyde dehydrogenase family BD_RS02660 PF00672 HAMP domain BD_RS02660 PF01627 Hpt domain BD_RS02660 PF00072 Response regulator receiver domain BD_RS02660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BD_RS02660 PF00512 His Kinase A (phospho-acceptor) domain BD_RS02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS02665 PF01820 D-ala D-ala ligase N-terminus BD_RS02665 PF07478 D-ala D-ala ligase C-terminus BD_RS02690 PF00633 Helix-hairpin-helix motif BD_RS02690 PF00730 HhH-GPD superfamily base excision DNA repair protein BD_RS02700 PF01547 Bacterial extracellular solute-binding protein BD_RS02710 PF00005 ABC transporter BD_RS02715 PF09308 LuxQ, periplasmic BD_RS02715 PF00512 His Kinase A (phospho-acceptor) domain BD_RS02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS02715 PF00072 Response regulator receiver domain BD_RS02750 PF00700 Bacterial flagellin C-terminal helical region BD_RS02750 PF00669 Bacterial flagellin N-terminal helical region BD_RS02765 PF00669 Bacterial flagellin N-terminal helical region BD_RS02765 PF00700 Bacterial flagellin C-terminal helical region BD_RS02775 PF00311 Phosphoenolpyruvate carboxylase BD_RS02785 PF07195 Flagellar hook-associated protein 2 C-terminus BD_RS02785 PF07196 Flagellin hook IN motif BD_RS02785 PF02465 Flagellar hook-associated protein 2 N-terminus BD_RS02790 PF02561 Flagellar protein FliS BD_RS02815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BD_RS02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS02825 PF00512 His Kinase A (phospho-acceptor) domain BD_RS02825 PF00072 Response regulator receiver domain BD_RS02825 PF08448 PAS fold BD_RS02825 PF13188 PAS domain BD_RS02830 PF00486 Transcriptional regulatory protein, C terminal BD_RS02830 PF00072 Response regulator receiver domain BD_RS02840 PF01467 Cytidylyltransferase-like BD_RS02845 PF00155 Aminotransferase class I and II BD_RS02865 PF00089 Trypsin BD_RS02885 PF00691 OmpA family BD_RS02900 PF00814 Glycoprotease family BD_RS02905 PF00398 Ribosomal RNA adenine dimethylase BD_RS02910 PF01668 SmpB protein BD_RS02940 PF01728 FtsJ-like methyltransferase BD_RS02940 PF18125 RlmM ferredoxin-like domain BD_RS02955 PF01047 MarR family BD_RS02970 PF00557 Metallopeptidase family M24 BD_RS02975 PF01256 Carbohydrate kinase BD_RS02985 PF00293 NUDIX domain BD_RS02995 PF03006 Haemolysin-III related BD_RS03000 PF07690 Major Facilitator Superfamily BD_RS03005 PF00999 Sodium/hydrogen exchanger family BD_RS03005 PF02254 TrkA-N domain BD_RS03025 PF12729 Four helix bundle sensory module for signal transduction BD_RS03025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS03025 PF00672 HAMP domain BD_RS03030 PF00135 Carboxylesterase family BD_RS03045 PF03502 Nucleoside-specific channel-forming protein, Tsx BD_RS03090 PF00684 DnaJ central domain BD_RS03090 PF00226 DnaJ domain BD_RS03090 PF01556 DnaJ C terminal domain BD_RS03125 PF01597 Glycine cleavage H-protein BD_RS03130 PF01571 Aminomethyltransferase folate-binding domain BD_RS03130 PF08669 Glycine cleavage T-protein C-terminal barrel domain BD_RS03165 PF02347 Glycine cleavage system P-protein BD_RS03170 PF07690 Major Facilitator Superfamily BD_RS03205 PF01523 Putative modulator of DNA gyrase BD_RS03210 PF01523 Putative modulator of DNA gyrase BD_RS03220 PF01336 OB-fold nucleic acid binding domain BD_RS03220 PF00152 tRNA synthetases class II (D, K and N) BD_RS03250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BD_RS03255 PF12704 MacB-like periplasmic core domain BD_RS03255 PF02687 FtsX-like permease family BD_RS03255 PF00005 ABC transporter BD_RS03265 PF00216 Bacterial DNA-binding protein BD_RS03280 PF00293 NUDIX domain BD_RS03285 PF01180 Dihydroorotate dehydrogenase BD_RS03290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BD_RS03290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BD_RS03305 PF01467 Cytidylyltransferase-like BD_RS03305 PF00294 pfkB family carbohydrate kinase BD_RS03315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD_RS03365 PF04055 Radical SAM superfamily BD_RS03380 PF05199 GMC oxidoreductase BD_RS03400 PF00342 Phosphoglucose isomerase BD_RS03405 PF00990 Diguanylate cyclase, GGDEF domain BD_RS03410 PF04542 Sigma-70 region 2 BD_RS03410 PF08281 Sigma-70, region 4 BD_RS03475 PF01641 SelR domain BD_RS03495 PF02562 PhoH-like protein BD_RS03495 PF13638 PIN domain BD_RS03515 PF03099 Biotin/lipoate A/B protein ligase family BD_RS03530 PF13350 Tyrosine phosphatase family BD_RS03560 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD_RS03560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD_RS03565 PF02817 e3 binding domain BD_RS03565 PF00364 Biotin-requiring enzyme BD_RS03565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BD_RS03570 PF03749 Sugar fermentation stimulation protein RE domain BD_RS03570 PF17746 SfsA N-terminal OB domain BD_RS03600 PF06965 Na+/H+ antiporter 1 BD_RS03600 PF13462 Thioredoxin BD_RS03620 PF00437 Type II/IV secretion system protein BD_RS03630 PF00113 Enolase, C-terminal TIM barrel domain BD_RS03630 PF03952 Enolase, N-terminal domain BD_RS03640 PF00199 Catalase BD_RS03640 PF06628 Catalase-related immune-responsive BD_RS03660 PF00476 DNA polymerase family A BD_RS03660 PF01367 5'-3' exonuclease, C-terminal SAM fold BD_RS03660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BD_RS03675 PF02954 Bacterial regulatory protein, Fis family BD_RS03675 PF00072 Response regulator receiver domain BD_RS03675 PF00158 Sigma-54 interaction domain BD_RS03680 PF01926 50S ribosome-binding GTPase BD_RS03685 PF02348 Cytidylyltransferase BD_RS03690 PF00117 Glutamine amidotransferase class-I BD_RS03690 PF06418 CTP synthase N-terminus BD_RS03695 PF01380 SIS domain BD_RS03695 PF00571 CBS domain BD_RS03705 PF06445 GyrI-like small molecule binding domain BD_RS03710 PF01451 Low molecular weight phosphotyrosine protein phosphatase BD_RS03765 PF00005 ABC transporter BD_RS03770 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS03775 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD_RS03820 PF00498 FHA domain BD_RS03825 PF01618 MotA/TolQ/ExbB proton channel family BD_RS03845 PF00005 ABC transporter BD_RS03850 PF04552 Sigma-54, DNA binding domain BD_RS03850 PF00309 Sigma-54 factor, Activator interacting domain (AID) BD_RS03850 PF04963 Sigma-54 factor, core binding domain BD_RS03860 PF00156 Phosphoribosyl transferase domain BD_RS03875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BD_RS03885 PF00438 S-adenosylmethionine synthetase, N-terminal domain BD_RS03885 PF02772 S-adenosylmethionine synthetase, central domain BD_RS03885 PF02773 S-adenosylmethionine synthetase, C-terminal domain BD_RS03890 PF03144 Elongation factor Tu domain 2 BD_RS03890 PF00009 Elongation factor Tu GTP binding domain BD_RS03890 PF00679 Elongation factor G C-terminus BD_RS03890 PF06421 GTP-binding protein LepA C-terminus BD_RS03895 PF10502 Signal peptidase, peptidase S26 BD_RS03900 PF10502 Signal peptidase, peptidase S26 BD_RS03905 PF10502 Signal peptidase, peptidase S26 BD_RS03910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BD_RS03910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BD_RS03915 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BD_RS03915 PF00117 Glutamine amidotransferase class-I BD_RS03925 PF02142 MGS-like domain BD_RS03925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BD_RS03925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD_RS03935 PF00005 ABC transporter BD_RS03945 PF01478 Type IV leader peptidase family BD_RS03945 PF06750 Bacterial Peptidase A24 N-terminal domain BD_RS03970 PF03958 Bacterial type II/III secretion system short domain BD_RS03970 PF07660 Secretin and TonB N terminus short domain BD_RS03970 PF00263 Bacterial type II and III secretion system protein BD_RS03970 PF11741 AMIN domain BD_RS03985 PF00004 ATPase family associated with various cellular activities (AAA) BD_RS03985 PF16193 AAA C-terminal domain BD_RS03985 PF12002 MgsA AAA+ ATPase C terminal BD_RS04025 PF12697 Alpha/beta hydrolase family BD_RS04050 PF01470 Pyroglutamyl peptidase BD_RS04060 PF08281 Sigma-70, region 4 BD_RS04060 PF04542 Sigma-70 region 2 BD_RS04070 PF00691 OmpA family BD_RS04070 PF05736 OprF membrane domain BD_RS04095 PF00873 AcrB/AcrD/AcrF family BD_RS04100 PF01329 Pterin 4 alpha carbinolamine dehydratase BD_RS04135 PF03466 LysR substrate binding domain BD_RS04135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS04140 PF08240 Alcohol dehydrogenase GroES-like domain BD_RS04140 PF00107 Zinc-binding dehydrogenase BD_RS04145 PF00756 Putative esterase BD_RS04150 PF00107 Zinc-binding dehydrogenase BD_RS04150 PF08240 Alcohol dehydrogenase GroES-like domain BD_RS04155 PF12706 Beta-lactamase superfamily domain BD_RS04160 PF03466 LysR substrate binding domain BD_RS04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS04165 PF03466 LysR substrate binding domain BD_RS04170 PF00034 Cytochrome c BD_RS04170 PF03150 Di-haem cytochrome c peroxidase BD_RS04200 PF00561 alpha/beta hydrolase fold BD_RS04225 PF00005 ABC transporter BD_RS04230 PF00690 Cation transporter/ATPase, N-terminus BD_RS04230 PF00689 Cation transporting ATPase, C-terminus BD_RS04235 PF00011 Hsp20/alpha crystallin family BD_RS04250 PF00571 CBS domain BD_RS04255 PF13180 PDZ domain BD_RS04260 PF16325 Peptidase family U32 C-terminal domain BD_RS04260 PF01136 Peptidase family U32 BD_RS04270 PF17785 PUA-like domain BD_RS04270 PF10672 S-adenosylmethionine-dependent methyltransferase BD_RS04280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BD_RS04280 PF00056 lactate/malate dehydrogenase, NAD binding domain BD_RS04290 PF01965 DJ-1/PfpI family BD_RS04295 PF02607 B12 binding domain BD_RS04295 PF13411 MerR HTH family regulatory protein BD_RS04300 PF02203 Tar ligand binding domain homologue BD_RS04300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS04300 PF00672 HAMP domain BD_RS04310 PF04231 Endonuclease I BD_RS04340 PF01084 Ribosomal protein S18 BD_RS04345 PF00830 Ribosomal L28 family BD_RS04360 PF00795 Carbon-nitrogen hydrolase BD_RS04375 PF10672 S-adenosylmethionine-dependent methyltransferase BD_RS04375 PF02926 THUMP domain BD_RS04375 PF01170 Putative RNA methylase family UPF0020 BD_RS04395 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BD_RS04395 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS04405 PF01176 Translation initiation factor 1A / IF-1 BD_RS04410 PF09371 Tex-like protein N-terminal domain BD_RS04410 PF00575 S1 RNA binding domain BD_RS04410 PF17674 HHH domain BD_RS04410 PF16921 Tex protein YqgF-like domain BD_RS04425 PF01523 Putative modulator of DNA gyrase BD_RS04430 PF01523 Putative modulator of DNA gyrase BD_RS04450 PF01131 DNA topoisomerase BD_RS04450 PF01751 Toprim domain BD_RS04450 PF13368 Topoisomerase C-terminal repeat BD_RS04460 PF03572 Peptidase family S41 BD_RS04460 PF17804 Tail specific protease N-terminal domain BD_RS04460 PF11818 C-terminal domain of tail specific protease (DUF3340) BD_RS04460 PF00595 PDZ domain BD_RS04480 PF02780 Transketolase, C-terminal domain BD_RS04480 PF02779 Transketolase, pyrimidine binding domain BD_RS04505 PF00156 Phosphoribosyl transferase domain BD_RS04510 PF03091 CutA1 divalent ion tolerance protein BD_RS04515 PF01595 Cyclin M transmembrane N-terminal domain BD_RS04515 PF00571 CBS domain BD_RS04540 PF03144 Elongation factor Tu domain 2 BD_RS04540 PF00009 Elongation factor Tu GTP binding domain BD_RS04540 PF00679 Elongation factor G C-terminus BD_RS04540 PF14492 Elongation Factor G, domain II BD_RS04540 PF03764 Elongation factor G, domain IV BD_RS04545 PF09382 RQC domain BD_RS04545 PF00270 DEAD/DEAH box helicase BD_RS04545 PF16124 RecQ zinc-binding BD_RS04545 PF00570 HRDC domain BD_RS04545 PF00271 Helicase conserved C-terminal domain BD_RS04550 PF07995 Glucose / Sorbosone dehydrogenase BD_RS04555 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BD_RS04575 PF00089 Trypsin BD_RS04580 PF12848 ABC transporter BD_RS04580 PF16326 ABC transporter C-terminal domain BD_RS04580 PF00005 ABC transporter BD_RS04610 PF00873 AcrB/AcrD/AcrF family BD_RS04615 PF00376 MerR family regulatory protein BD_RS04615 PF09278 MerR, DNA binding BD_RS04625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BD_RS04630 PF04264 YceI-like domain BD_RS04635 PF03466 LysR substrate binding domain BD_RS04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS04645 PF00586 AIR synthase related protein, N-terminal domain BD_RS04645 PF02769 AIR synthase related protein, C-terminal domain BD_RS04650 PF02503 Polyphosphate kinase middle domain BD_RS04650 PF13089 Polyphosphate kinase N-terminal domain BD_RS04650 PF17941 Polyphosphate kinase C-terminal domain 1 BD_RS04650 PF13090 Polyphosphate kinase C-terminal domain 2 BD_RS04655 PF00300 Histidine phosphatase superfamily (branch 1) BD_RS04670 PF02541 Ppx/GppA phosphatase family BD_RS04680 PF01895 PhoU domain BD_RS04685 PF00072 Response regulator receiver domain BD_RS04685 PF00486 Transcriptional regulatory protein, C terminal BD_RS04690 PF00512 His Kinase A (phospho-acceptor) domain BD_RS04690 PF16736 Single Cache-like BD_RS04690 PF00989 PAS fold BD_RS04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS04695 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BD_RS04695 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BD_RS04695 PF01189 16S rRNA methyltransferase RsmB/F BD_RS04710 PF00005 ABC transporter BD_RS04745 PF01544 CorA-like Mg2+ transporter protein BD_RS04750 PF12146 Serine aminopeptidase, S33 BD_RS04785 PF02223 Thymidylate kinase BD_RS04790 PF09115 DNA polymerase III, delta subunit, C terminal BD_RS04795 PF01026 TatD related DNase BD_RS04825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BD_RS04825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BD_RS04830 PF00162 Phosphoglycerate kinase BD_RS04835 PF00121 Triosephosphate isomerase BD_RS04850 PF01336 OB-fold nucleic acid binding domain BD_RS04850 PF00152 tRNA synthetases class II (D, K and N) BD_RS04855 PF13291 ACT domain BD_RS04855 PF00291 Pyridoxal-phosphate dependent enzyme BD_RS04865 PF01625 Peptide methionine sulfoxide reductase BD_RS04880 PF00155 Aminotransferase class I and II BD_RS04885 PF02224 Cytidylate kinase BD_RS04905 PF00575 S1 RNA binding domain BD_RS04910 PF01343 Peptidase family S49 BD_RS04920 PF01230 HIT domain BD_RS04940 PF13416 Bacterial extracellular solute-binding protein BD_RS04950 PF03748 Flagellar basal body-associated protein FliL BD_RS04955 PF00675 Insulinase (Peptidase family M16) BD_RS04955 PF05193 Peptidase M16 inactive domain BD_RS04970 PF03466 LysR substrate binding domain BD_RS04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS04975 PF00672 HAMP domain BD_RS04975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS04975 PF02203 Tar ligand binding domain homologue BD_RS05020 PF03618 Kinase/pyrophosphorylase BD_RS05035 PF01029 NusB family BD_RS05040 PF03477 ATP cone domain BD_RS05050 PF01029 NusB family BD_RS05050 PF01189 16S rRNA methyltransferase RsmB/F BD_RS05070 PF01790 Prolipoprotein diacylglyceryl transferase BD_RS05080 PF03129 Anticodon binding domain BD_RS05080 PF13393 Histidyl-tRNA synthetase BD_RS05095 PF00005 ABC transporter BD_RS05120 PF00211 Adenylate and Guanylate cyclase catalytic domain BD_RS05135 PF01272 Transcription elongation factor, GreA/GreB, C-term BD_RS05135 PF03449 Transcription elongation factor, N-terminal BD_RS05165 PF01464 Transglycosylase SLT domain BD_RS05165 PF01476 LysM domain BD_RS05170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS05170 PF00672 HAMP domain BD_RS05170 PF02203 Tar ligand binding domain homologue BD_RS05175 PF03466 LysR substrate binding domain BD_RS05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS05195 PF01063 Amino-transferase class IV BD_RS05200 PF10609 NUBPL iron-transfer P-loop NTPase BD_RS05230 PF04304 Protein of unknown function (DUF454) BD_RS05235 PF00873 AcrB/AcrD/AcrF family BD_RS05245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD_RS05245 PF03129 Anticodon binding domain BD_RS05260 PF00391 PEP-utilising enzyme, mobile domain BD_RS05260 PF02896 PEP-utilising enzyme, TIM barrel domain BD_RS05260 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BD_RS05265 PF02470 MlaD protein BD_RS05270 PF04403 Paraquat-inducible protein A BD_RS05275 PF00199 Catalase BD_RS05275 PF06628 Catalase-related immune-responsive BD_RS05290 PF02463 RecF/RecN/SMC N terminal domain BD_RS05290 PF06470 SMC proteins Flexible Hinge Domain BD_RS05310 PF00881 Nitroreductase family BD_RS05315 PF02082 Transcriptional regulator BD_RS05355 PF00448 SRP54-type protein, GTPase domain BD_RS05355 PF02881 SRP54-type protein, helical bundle domain BD_RS05365 PF13460 NAD(P)H-binding BD_RS05405 PF05164 Cell division protein ZapA BD_RS05410 PF01812 5-formyltetrahydrofolate cyclo-ligase family BD_RS05415 PF01966 HD domain BD_RS05415 PF00013 KH domain BD_RS05415 PF12072 Domain of unknown function (DUF3552) BD_RS05420 PF00579 tRNA synthetases class I (W and Y) BD_RS05420 PF01479 S4 domain BD_RS05430 PF00561 alpha/beta hydrolase fold BD_RS05435 PF01521 Iron-sulphur cluster biosynthesis BD_RS05440 PF00266 Aminotransferase class-V BD_RS05450 PF02867 Ribonucleotide reductase, barrel domain BD_RS05450 PF08471 Class II vitamin B12-dependent ribonucleotide reductase BD_RS05455 PF00575 S1 RNA binding domain BD_RS05465 PF00994 Probable molybdopterin binding domain BD_RS05465 PF18146 Damage-inducible protein CinA KH domain BD_RS05465 PF02464 Competence-damaged protein BD_RS05475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD_RS05475 PF02770 Acyl-CoA dehydrogenase, middle domain BD_RS05475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD_RS05480 PF00588 SpoU rRNA Methylase family BD_RS05495 PF01170 Putative RNA methylase family UPF0020 BD_RS05495 PF10672 S-adenosylmethionine-dependent methyltransferase BD_RS05495 PF02926 THUMP domain BD_RS05500 PF04011 LemA family BD_RS05505 PF04536 TPM domain BD_RS05530 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BD_RS05565 PF00005 ABC transporter BD_RS05565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD_RS05570 PF00480 ROK family BD_RS05575 PF02806 Alpha amylase, C-terminal all-beta domain BD_RS05575 PF00128 Alpha amylase, catalytic domain BD_RS05580 PF00005 ABC transporter BD_RS05580 PF17912 MalK OB fold domain BD_RS05585 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS05590 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS05595 PF17967 Pullulanase N2 domain BD_RS05595 PF18494 Pullulanase Ins domain BD_RS05595 PF03714 Bacterial pullanase-associated domain BD_RS05595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BD_RS05595 PF11852 Domain of unknown function (DUF3372) BD_RS05600 PF02264 LamB porin BD_RS05610 PF02678 Pirin BD_RS05610 PF05726 Pirin C-terminal cupin domain BD_RS05615 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BD_RS05615 PF01048 Phosphorylase superfamily BD_RS05630 PF00210 Ferritin-like domain BD_RS05640 PF01590 GAF domain BD_RS05640 PF02954 Bacterial regulatory protein, Fis family BD_RS05685 PF00171 Aldehyde dehydrogenase family BD_RS05690 PF01557 Fumarylacetoacetate (FAA) hydrolase family BD_RS05700 PF01430 Hsp33 protein BD_RS05705 PF13091 PLD-like domain BD_RS05705 PF13396 Phospholipase_D-nuclease N-terminal BD_RS05710 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB BD_RS05710 PF00672 HAMP domain BD_RS05710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS05710 PF00512 His Kinase A (phospho-acceptor) domain BD_RS05710 PF08448 PAS fold BD_RS05735 PF18324 Hypothetical protein TT1725 BD_RS05735 PF00180 Isocitrate/isopropylmalate dehydrogenase BD_RS05800 PF00488 MutS domain V BD_RS05800 PF01713 Smr domain BD_RS05805 PF00795 Carbon-nitrogen hydrolase BD_RS05825 PF00082 Subtilase family BD_RS05840 PF01435 Peptidase family M48 BD_RS05845 PF10431 C-terminal, D2-small domain, of ClpB protein BD_RS05845 PF07724 AAA domain (Cdc48 subfamily) BD_RS05845 PF02861 Clp amino terminal domain, pathogenicity island component BD_RS05845 PF17871 AAA lid domain BD_RS05845 PF00004 ATPase family associated with various cellular activities (AAA) BD_RS05850 PF02617 ATP-dependent Clp protease adaptor protein ClpS BD_RS05855 PF14245 Type IV pilin PilA BD_RS05855 PF07963 Prokaryotic N-terminal methylation motif BD_RS05880 PF00684 DnaJ central domain BD_RS05880 PF01556 DnaJ C terminal domain BD_RS05880 PF00226 DnaJ domain BD_RS05885 PF00012 Hsp70 protein BD_RS05890 PF00027 Cyclic nucleotide-binding domain BD_RS05890 PF13545 Crp-like helix-turn-helix domain BD_RS05895 PF00753 Metallo-beta-lactamase superfamily BD_RS05900 PF00581 Rhodanese-like domain BD_RS05905 PF04143 Sulphur transport BD_RS05915 PF01925 Sulfite exporter TauE/SafE BD_RS05920 PF16177 Acetyl-coenzyme A synthetase N-terminus BD_RS05920 PF00501 AMP-binding enzyme BD_RS05920 PF13193 AMP-binding enzyme C-terminal domain BD_RS05930 PF01207 Dihydrouridine synthase (Dus) BD_RS05955 PF01207 Dihydrouridine synthase (Dus) BD_RS05965 PF02810 SEC-C motif BD_RS05970 PF00106 short chain dehydrogenase BD_RS05975 PF00206 Lyase BD_RS05975 PF10415 Fumarase C C-terminus BD_RS05990 PF13361 UvrD-like helicase C-terminal domain BD_RS05990 PF00580 UvrD/REP helicase N-terminal domain BD_RS06000 PF00849 RNA pseudouridylate synthase BD_RS06025 PF01722 BolA-like protein BD_RS06040 PF12848 ABC transporter BD_RS06040 PF00005 ABC transporter BD_RS06055 PF09308 LuxQ, periplasmic BD_RS06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS06055 PF00072 Response regulator receiver domain BD_RS06055 PF00512 His Kinase A (phospho-acceptor) domain BD_RS06070 PF00557 Metallopeptidase family M24 BD_RS06075 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BD_RS06075 PF05221 S-adenosyl-L-homocysteine hydrolase BD_RS06080 PF00672 HAMP domain BD_RS06080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS06080 PF02203 Tar ligand binding domain homologue BD_RS06090 PF08713 DNA alkylation repair enzyme BD_RS06100 PF00929 Exonuclease BD_RS06105 PF00072 Response regulator receiver domain BD_RS06105 PF00486 Transcriptional regulatory protein, C terminal BD_RS06140 PF00106 short chain dehydrogenase BD_RS06195 PF07690 Major Facilitator Superfamily BD_RS06200 PF01641 SelR domain BD_RS06200 PF01625 Peptide methionine sulfoxide reductase BD_RS06225 PF00270 DEAD/DEAH box helicase BD_RS06225 PF00271 Helicase conserved C-terminal domain BD_RS06230 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BD_RS06230 PF00749 tRNA synthetases class I (E and Q), catalytic domain BD_RS06235 PF00557 Metallopeptidase family M24 BD_RS06275 PF00512 His Kinase A (phospho-acceptor) domain BD_RS06275 PF01627 Hpt domain BD_RS06275 PF17149 Periplasmic sensor domain found in signal transduction proteins BD_RS06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS06275 PF00672 HAMP domain BD_RS06275 PF00072 Response regulator receiver domain BD_RS06280 PF00072 Response regulator receiver domain BD_RS06280 PF00989 PAS fold BD_RS06280 PF01627 Hpt domain BD_RS06280 PF00512 His Kinase A (phospho-acceptor) domain BD_RS06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS06280 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD_RS06285 PF00849 RNA pseudouridylate synthase BD_RS06300 PF01053 Cys/Met metabolism PLP-dependent enzyme BD_RS06315 PF04820 Tryptophan halogenase BD_RS06325 PF07715 TonB-dependent Receptor Plug Domain BD_RS06325 PF00593 TonB dependent receptor BD_RS06335 PF03880 DbpA RNA binding domain BD_RS06335 PF00271 Helicase conserved C-terminal domain BD_RS06335 PF00270 DEAD/DEAH box helicase BD_RS06340 PF13509 S1 domain BD_RS06340 PF17783 CvfB-like winged helix domain BD_RS06345 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BD_RS06365 PF00080 Copper/zinc superoxide dismutase (SODC) BD_RS06415 PF00270 DEAD/DEAH box helicase BD_RS06415 PF00271 Helicase conserved C-terminal domain BD_RS06425 PF16326 ABC transporter C-terminal domain BD_RS06425 PF00005 ABC transporter BD_RS06425 PF12848 ABC transporter BD_RS06440 PF13416 Bacterial extracellular solute-binding protein BD_RS06445 PF00005 ABC transporter BD_RS06445 PF08402 TOBE domain BD_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS06455 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS06460 PF11700 Vacuole effluxer Atg22 like BD_RS06465 PF01728 FtsJ-like methyltransferase BD_RS06470 PF00849 RNA pseudouridylate synthase BD_RS06470 PF01479 S4 domain BD_RS06475 PF01047 MarR family BD_RS06480 PF01966 HD domain BD_RS06505 PF00082 Subtilase family BD_RS06510 PF00072 Response regulator receiver domain BD_RS06510 PF00990 Diguanylate cyclase, GGDEF domain BD_RS06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD_RS06515 PF14759 Reductase C-terminal BD_RS06520 PF02566 OsmC-like protein BD_RS06525 PF03601 Conserved hypothetical protein 698 BD_RS06555 PF13860 FlgD Ig-like domain BD_RS06555 PF05922 Peptidase inhibitor I9 BD_RS06555 PF02225 PA domain BD_RS06555 PF00082 Subtilase family BD_RS06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS06585 PF03466 LysR substrate binding domain BD_RS06600 PF01494 FAD binding domain BD_RS06630 PF00709 Adenylosuccinate synthetase BD_RS06635 PF01842 ACT domain BD_RS06635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD_RS06635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD_RS06640 PF00266 Aminotransferase class-V BD_RS06660 PF01649 Ribosomal protein S20 BD_RS06665 PF03023 Lipid II flippase MurJ BD_RS06670 PF02203 Tar ligand binding domain homologue BD_RS06670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS06670 PF00672 HAMP domain BD_RS06675 PF02203 Tar ligand binding domain homologue BD_RS06675 PF00672 HAMP domain BD_RS06675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS06720 PF01618 MotA/TolQ/ExbB proton channel family BD_RS06735 PF03819 MazG nucleotide pyrophosphohydrolase domain BD_RS06740 PF07698 7TM receptor with intracellular HD hydrolase BD_RS06740 PF01966 HD domain BD_RS06740 PF07697 7TM-HD extracellular BD_RS06745 PF02130 Uncharacterized protein family UPF0054 BD_RS06750 PF00472 RF-1 domain BD_RS06750 PF03462 PCRF domain BD_RS06755 PF12704 MacB-like periplasmic core domain BD_RS06755 PF00005 ABC transporter BD_RS06755 PF02687 FtsX-like permease family BD_RS06760 PF00005 ABC transporter BD_RS06765 PF07244 Surface antigen variable number repeat BD_RS06765 PF01103 Surface antigen BD_RS06775 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BD_RS06775 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS06785 PF02684 Lipid-A-disaccharide synthetase BD_RS06790 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BD_RS06795 PF03279 Bacterial lipid A biosynthesis acyltransferase BD_RS06820 PF00072 Response regulator receiver domain BD_RS06820 PF00158 Sigma-54 interaction domain BD_RS06820 PF02954 Bacterial regulatory protein, Fis family BD_RS06825 PF00512 His Kinase A (phospho-acceptor) domain BD_RS06825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS06830 PF01687 Riboflavin kinase BD_RS06830 PF06574 FAD synthetase BD_RS06840 PF00437 Type II/IV secretion system protein BD_RS06840 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BD_RS06850 PF00482 Type II secretion system (T2SS), protein F BD_RS06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS06855 PF00512 His Kinase A (phospho-acceptor) domain BD_RS06855 PF00989 PAS fold BD_RS06860 PF02954 Bacterial regulatory protein, Fis family BD_RS06860 PF00158 Sigma-54 interaction domain BD_RS06860 PF00072 Response regulator receiver domain BD_RS06875 PF13396 Phospholipase_D-nuclease N-terminal BD_RS06875 PF13091 PLD-like domain BD_RS06890 PF00849 RNA pseudouridylate synthase BD_RS06905 PF02954 Bacterial regulatory protein, Fis family BD_RS06905 PF00072 Response regulator receiver domain BD_RS06905 PF00158 Sigma-54 interaction domain BD_RS06935 PF00005 ABC transporter BD_RS06935 PF00664 ABC transporter transmembrane region BD_RS06940 PF00485 Phosphoribulokinase / Uridine kinase family BD_RS06960 PF00171 Aldehyde dehydrogenase family BD_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS06965 PF00072 Response regulator receiver domain BD_RS06965 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD_RS06965 PF00512 His Kinase A (phospho-acceptor) domain BD_RS06965 PF01627 Hpt domain BD_RS07020 PF02576 RimP N-terminal domain BD_RS07020 PF17384 RimP C-terminal SH3 domain BD_RS07025 PF00575 S1 RNA binding domain BD_RS07025 PF13184 NusA-like KH domain BD_RS07025 PF08529 NusA N-terminal domain BD_RS07030 PF11987 Translation-initiation factor 2 BD_RS07030 PF00009 Elongation factor Tu GTP binding domain BD_RS07030 PF04760 Translation initiation factor IF-2, N-terminal region BD_RS07035 PF02033 Ribosome-binding factor A BD_RS07040 PF16198 tRNA pseudouridylate synthase B C-terminal domain BD_RS07040 PF01509 TruB family pseudouridylate synthase (N terminal domain) BD_RS07045 PF00312 Ribosomal protein S15 BD_RS07050 PF00575 S1 RNA binding domain BD_RS07050 PF03725 3' exoribonuclease family, domain 2 BD_RS07050 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BD_RS07050 PF01138 3' exoribonuclease family, domain 1 BD_RS07050 PF00013 KH domain BD_RS07055 PF00675 Insulinase (Peptidase family M16) BD_RS07055 PF05193 Peptidase M16 inactive domain BD_RS07060 PF00692 dUTPase BD_RS07095 PF00535 Glycosyl transferase family 2 BD_RS07110 PF01119 DNA mismatch repair protein, C-terminal domain BD_RS07110 PF08676 MutL C terminal dimerisation domain BD_RS07120 PF03755 YicC-like family, N-terminal region BD_RS07120 PF08340 Domain of unknown function (DUF1732) BD_RS07125 PF00625 Guanylate kinase BD_RS07130 PF01192 RNA polymerase Rpb6 BD_RS07135 PF02824 TGS domain BD_RS07135 PF04607 Region found in RelA / SpoT proteins BD_RS07135 PF13291 ACT domain BD_RS07140 PF00072 Response regulator receiver domain BD_RS07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS07140 PF13426 PAS domain BD_RS07150 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BD_RS07155 PF06276 Ferric iron reductase FhuF-like transporter BD_RS07155 PF04183 IucA / IucC family BD_RS07165 PF04183 IucA / IucC family BD_RS07165 PF06276 Ferric iron reductase FhuF-like transporter BD_RS07195 PF00436 Single-strand binding protein family BD_RS07210 PF11104 Type IV pilus assembly protein PilM; BD_RS07240 PF07963 Prokaryotic N-terminal methylation motif BD_RS07240 PF08334 Type II secretion system (T2SS), protein G BD_RS07255 PF00482 Type II secretion system (T2SS), protein F BD_RS07260 PF00437 Type II/IV secretion system protein BD_RS07260 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BD_RS07265 PF00263 Bacterial type II and III secretion system protein BD_RS07265 PF03958 Bacterial type II/III secretion system short domain BD_RS07290 PF01923 Cobalamin adenosyltransferase BD_RS07300 PF01578 Cytochrome C assembly protein BD_RS07300 PF05140 ResB-like family BD_RS07305 PF01578 Cytochrome C assembly protein BD_RS07305 PF05140 ResB-like family BD_RS07315 PF13247 4Fe-4S dicluster domain BD_RS07315 PF12800 4Fe-4S binding domain BD_RS07360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD_RS07360 PF03129 Anticodon binding domain BD_RS07360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD_RS07360 PF02824 TGS domain BD_RS07365 PF00707 Translation initiation factor IF-3, C-terminal domain BD_RS07365 PF05198 Translation initiation factor IF-3, N-terminal domain BD_RS07370 PF02580 D-Tyr-tRNA(Tyr) deacylase BD_RS07375 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BD_RS07375 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BD_RS07390 PF01632 Ribosomal protein L35 BD_RS07395 PF00453 Ribosomal protein L20 BD_RS07400 PF01070 FMN-dependent dehydrogenase BD_RS07405 PF00368 Hydroxymethylglutaryl-coenzyme A reductase BD_RS07430 PF00588 SpoU rRNA Methylase family BD_RS07430 PF02527 rRNA small subunit methyltransferase G BD_RS07445 PF02527 rRNA small subunit methyltransferase G BD_RS07450 PF01409 tRNA synthetases class II core domain (F) BD_RS07450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BD_RS07455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BD_RS07455 PF01588 Putative tRNA binding domain BD_RS07455 PF03147 Ferredoxin-fold anticodon binding domain BD_RS07455 PF03484 tRNA synthetase B5 domain BD_RS07455 PF03483 B3/4 domain BD_RS07460 PF00216 Bacterial DNA-binding protein BD_RS07500 PF01594 AI-2E family transporter BD_RS07530 PF01475 Ferric uptake regulator family BD_RS07535 PF00072 Response regulator receiver domain BD_RS07535 PF13188 PAS domain BD_RS07535 PF08448 PAS fold BD_RS07535 PF00512 His Kinase A (phospho-acceptor) domain BD_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS07540 PF12849 PBP superfamily domain BD_RS07545 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS07555 PF00005 ABC transporter BD_RS07580 PF04434 SWIM zinc finger BD_RS07580 PF00176 SNF2 family N-terminal domain BD_RS07580 PF00271 Helicase conserved C-terminal domain BD_RS07585 PF03062 MBOAT, membrane-bound O-acyltransferase family BD_RS07610 PF00884 Sulfatase BD_RS07620 PF00884 Sulfatase BD_RS07625 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS07635 PF16363 GDP-mannose 4,6 dehydratase BD_RS07640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD_RS07645 PF02350 UDP-N-acetylglucosamine 2-epimerase BD_RS07650 PF00551 Formyl transferase BD_RS07650 PF02911 Formyl transferase, C-terminal domain BD_RS07655 PF02585 GlcNAc-PI de-N-acetylase BD_RS07660 PF08666 SAF domain BD_RS07660 PF03102 NeuB family BD_RS07670 PF00483 Nucleotidyl transferase BD_RS07675 PF02348 Cytidylyltransferase BD_RS07700 PF00117 Glutamine amidotransferase class-I BD_RS07705 PF00977 Histidine biosynthesis protein BD_RS07710 PF08485 Polysaccharide biosynthesis protein C-terminal BD_RS07710 PF02719 Polysaccharide biosynthesis protein BD_RS07715 PF01370 NAD dependent epimerase/dehydratase family BD_RS07720 PF02350 UDP-N-acetylglucosamine 2-epimerase BD_RS07730 PF00550 Phosphopantetheine attachment site BD_RS07730 PF01370 NAD dependent epimerase/dehydratase family BD_RS07730 PF00501 AMP-binding enzyme BD_RS07735 PF02397 Bacterial sugar transferase BD_RS07745 PF02719 Polysaccharide biosynthesis protein BD_RS07765 PF03060 Nitronate monooxygenase BD_RS07785 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS07785 PF12804 MobA-like NTP transferase domain BD_RS07785 PF03479 Plants and Prokaryotes Conserved (PCC) domain BD_RS07790 PF00291 Pyridoxal-phosphate dependent enzyme BD_RS07795 PF03372 Endonuclease/Exonuclease/phosphatase family BD_RS07815 PF03030 Inorganic H+ pyrophosphatase BD_RS07830 PF06055 Exopolysaccharide synthesis, ExoD BD_RS07860 PF01593 Flavin containing amine oxidoreductase BD_RS07880 PF00005 ABC transporter BD_RS07895 PF18389 TrmO C-terminal domain BD_RS07895 PF01980 tRNA-methyltransferase O BD_RS07905 PF09334 tRNA synthetases class I (M) BD_RS07905 PF08264 Anticodon-binding domain of tRNA BD_RS07905 PF01588 Putative tRNA binding domain BD_RS07910 PF00484 Carbonic anhydrase BD_RS07915 PF01063 Amino-transferase class IV BD_RS07930 PF00535 Glycosyl transferase family 2 BD_RS07955 PF00291 Pyridoxal-phosphate dependent enzyme BD_RS07960 PF03466 LysR substrate binding domain BD_RS07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS07965 PF05139 Erythromycin esterase BD_RS07965 PF00156 Phosphoribosyl transferase domain BD_RS07980 PF00873 AcrB/AcrD/AcrF family BD_RS08005 PF00893 Small Multidrug Resistance protein BD_RS08010 PF03358 NADPH-dependent FMN reductase BD_RS08020 PF13493 Domain of unknown function (DUF4118) BD_RS08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS08020 PF00512 His Kinase A (phospho-acceptor) domain BD_RS08020 PF02702 Osmosensitive K+ channel His kinase sensor domain BD_RS08025 PF00072 Response regulator receiver domain BD_RS08025 PF00486 Transcriptional regulatory protein, C terminal BD_RS08050 PF01042 Endoribonuclease L-PSP BD_RS08060 PF02405 Permease MlaE BD_RS08065 PF00005 ABC transporter BD_RS08085 PF02687 FtsX-like permease family BD_RS08085 PF12704 MacB-like periplasmic core domain BD_RS08085 PF00005 ABC transporter BD_RS08090 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS08090 PF14602 Hexapeptide repeat of succinyl-transferase BD_RS08090 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BD_RS08100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BD_RS08100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BD_RS08105 PF01177 Asp/Glu/Hydantoin racemase BD_RS08110 PF00478 IMP dehydrogenase / GMP reductase domain BD_RS08110 PF00571 CBS domain BD_RS08120 PF05368 NmrA-like family BD_RS08180 PF01479 S4 domain BD_RS08180 PF00849 RNA pseudouridylate synthase BD_RS08200 PF00873 AcrB/AcrD/AcrF family BD_RS08205 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BD_RS08215 PF01355 High potential iron-sulfur protein BD_RS08220 PF13193 AMP-binding enzyme C-terminal domain BD_RS08220 PF00501 AMP-binding enzyme BD_RS08230 PF00578 AhpC/TSA family BD_RS08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS08235 PF00183 Hsp90 protein BD_RS08240 PF02824 TGS domain BD_RS08240 PF03129 Anticodon binding domain BD_RS08240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD_RS08240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD_RS08250 PF03301 Tryptophan 2,3-dioxygenase BD_RS08255 PF01212 Beta-eliminating lyase BD_RS08260 PF00491 Arginase family BD_RS08280 PF00654 Voltage gated chloride channel BD_RS08295 PF08331 Domain of unknown function (DUF1730) BD_RS08300 PF12627 Probable RNA and SrmB- binding site of polymerase A BD_RS08300 PF13735 tRNA nucleotidyltransferase domain 2 putative BD_RS08300 PF01743 Poly A polymerase head domain BD_RS08320 PF00072 Response regulator receiver domain BD_RS08325 PF00072 Response regulator receiver domain BD_RS08325 PF00196 Bacterial regulatory proteins, luxR family BD_RS08330 PF03061 Thioesterase superfamily BD_RS08335 PF00072 Response regulator receiver domain BD_RS08335 PF09308 LuxQ, periplasmic BD_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS08335 PF00512 His Kinase A (phospho-acceptor) domain BD_RS08350 PF13167 GTP-binding GTPase N-terminal BD_RS08350 PF01926 50S ribosome-binding GTPase BD_RS08350 PF16360 GTP-binding GTPase Middle Region BD_RS08355 PF02417 Chromate transporter BD_RS08365 PF02803 Thiolase, C-terminal domain BD_RS08365 PF00108 Thiolase, N-terminal domain BD_RS08370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BD_RS08370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BD_RS08370 PF00378 Enoyl-CoA hydratase/isomerase BD_RS08375 PF01266 FAD dependent oxidoreductase BD_RS08390 PF00854 POT family BD_RS08425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BD_RS08425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BD_RS08430 PF00378 Enoyl-CoA hydratase/isomerase BD_RS08435 PF01642 Methylmalonyl-CoA mutase BD_RS08435 PF02310 B12 binding domain BD_RS08440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS08440 PF00512 His Kinase A (phospho-acceptor) domain BD_RS08440 PF00672 HAMP domain BD_RS08445 PF04226 Transglycosylase associated protein BD_RS08460 PF02666 Phosphatidylserine decarboxylase BD_RS08470 PF01242 6-pyruvoyl tetrahydropterin synthase BD_RS08490 PF07664 Ferrous iron transport protein B C terminus BD_RS08490 PF07670 Nucleoside recognition BD_RS08490 PF02421 Ferrous iron transport protein B BD_RS08500 PF16363 GDP-mannose 4,6 dehydratase BD_RS08505 PF00483 Nucleotidyl transferase BD_RS08510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD_RS08525 PF13533 Biotin-lipoyl like BD_RS08530 PF00005 ABC transporter BD_RS08535 PF00005 ABC transporter BD_RS08580 PF00939 Sodium:sulfate symporter transmembrane region BD_RS08605 PF01590 GAF domain BD_RS08605 PF02954 Bacterial regulatory protein, Fis family BD_RS08605 PF00158 Sigma-54 interaction domain BD_RS08660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD_RS08700 PF13520 Amino acid permease BD_RS08715 PF01066 CDP-alcohol phosphatidyltransferase BD_RS08720 PF03061 Thioesterase superfamily BD_RS08725 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BD_RS08760 PF00171 Aldehyde dehydrogenase family BD_RS08765 PF01171 PP-loop family BD_RS08770 PF01434 Peptidase family M41 BD_RS08770 PF17862 AAA+ lid domain BD_RS08770 PF00004 ATPase family associated with various cellular activities (AAA) BD_RS08775 PF02457 DisA bacterial checkpoint controller nucleotide-binding BD_RS08785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD_RS08785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD_RS08785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD_RS08785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD_RS08790 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BD_RS08795 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BD_RS08820 PF00266 Aminotransferase class-V BD_RS08830 PF00919 Uncharacterized protein family UPF0004 BD_RS08830 PF04055 Radical SAM superfamily BD_RS08835 PF14622 Ribonuclease-III-like BD_RS08835 PF00035 Double-stranded RNA binding motif BD_RS08840 PF07650 KH domain BD_RS08840 PF01926 50S ribosome-binding GTPase BD_RS08845 PF01926 50S ribosome-binding GTPase BD_RS08845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BD_RS08850 PF00209 Sodium:neurotransmitter symporter family BD_RS08860 PF00255 Glutathione peroxidase BD_RS08870 PF00206 Lyase BD_RS08870 PF10397 Adenylosuccinate lyase C-terminus BD_RS08875 PF17676 LD-carboxypeptidase C-terminal domain BD_RS08875 PF02016 LD-carboxypeptidase N-terminal domain BD_RS08880 PF00144 Beta-lactamase BD_RS08885 PF01225 Mur ligase family, catalytic domain BD_RS08885 PF02875 Mur ligase family, glutamate ligase domain BD_RS08885 PF08245 Mur ligase middle domain BD_RS08895 PF05188 MutS domain II BD_RS08895 PF00488 MutS domain V BD_RS08895 PF05190 MutS family domain IV BD_RS08895 PF01624 MutS domain I BD_RS08895 PF05192 MutS domain III BD_RS08900 PF01966 HD domain BD_RS08900 PF01909 Nucleotidyltransferase domain BD_RS08900 PF08335 GlnD PII-uridylyltransferase BD_RS08930 PF02657 Fe-S metabolism associated domain BD_RS08945 PF01709 Transcriptional regulator BD_RS08960 PF01479 S4 domain BD_RS08960 PF00849 RNA pseudouridylate synthase BD_RS08980 PF00563 EAL domain BD_RS08980 PF00498 FHA domain BD_RS08980 PF00990 Diguanylate cyclase, GGDEF domain BD_RS08985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD_RS08990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD_RS08990 PF02770 Acyl-CoA dehydrogenase, middle domain BD_RS08990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD_RS08995 PF02163 Peptidase family M50 BD_RS09000 PF02616 Segregation and condensation protein ScpA BD_RS09005 PF04079 Segregation and condensation complex subunit ScpB BD_RS09020 PF00085 Thioredoxin BD_RS09035 PF00268 Ribonucleotide reductase, small chain BD_RS09040 PF03477 ATP cone domain BD_RS09040 PF02867 Ribonucleotide reductase, barrel domain BD_RS09040 PF00317 Ribonucleotide reductase, all-alpha domain BD_RS09045 PF16199 Radical_SAM C-terminal domain BD_RS09045 PF04055 Radical SAM superfamily BD_RS09100 PF03358 NADPH-dependent FMN reductase BD_RS09105 PF02705 K+ potassium transporter BD_RS09120 PF01062 Bestrophin, RFP-TM, chloride channel BD_RS09145 PF01476 LysM domain BD_RS09145 PF01551 Peptidase family M23 BD_RS09150 PF00464 Serine hydroxymethyltransferase BD_RS09155 PF02502 Ribose/Galactose Isomerase BD_RS09160 PF02801 Beta-ketoacyl synthase, C-terminal domain BD_RS09160 PF00109 Beta-ketoacyl synthase, N-terminal domain BD_RS09165 PF00550 Phosphopantetheine attachment site BD_RS09175 PF00698 Acyl transferase domain BD_RS09180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD_RS09180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD_RS09185 PF01783 Ribosomal L32p protein family BD_RS09195 PF00561 alpha/beta hydrolase fold BD_RS09215 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS09220 PF00005 ABC transporter BD_RS09235 PF02899 Phage integrase, N-terminal SAM-like domain BD_RS09235 PF00589 Phage integrase family BD_RS09245 PF00750 tRNA synthetases class I (R) BD_RS09245 PF05746 DALR anticodon binding domain BD_RS09245 PF03485 Arginyl tRNA synthetase N terminal domain BD_RS09250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BD_RS09250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BD_RS09275 PF00266 Aminotransferase class-V BD_RS09285 PF00753 Metallo-beta-lactamase superfamily BD_RS09285 PF10996 Beta-Casp domain BD_RS09285 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BD_RS09300 PF13419 Haloacid dehalogenase-like hydrolase BD_RS09320 PF07943 Penicillin-binding protein 5, C-terminal domain BD_RS09320 PF00768 D-alanyl-D-alanine carboxypeptidase BD_RS09365 PF17820 PDZ domain BD_RS09365 PF13180 PDZ domain BD_RS09380 PF05958 tRNA (Uracil-5-)-methyltransferase BD_RS09420 PF01171 PP-loop family BD_RS09430 PF02798 Glutathione S-transferase, N-terminal domain BD_RS09430 PF00043 Glutathione S-transferase, C-terminal domain BD_RS09450 PF00108 Thiolase, N-terminal domain BD_RS09450 PF02803 Thiolase, C-terminal domain BD_RS09470 PF00296 Luciferase-like monooxygenase BD_RS09490 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD_RS09490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD_RS09490 PF14579 Helix-hairpin-helix motif BD_RS09490 PF02811 PHP domain BD_RS09500 PF00117 Glutamine amidotransferase class-I BD_RS09500 PF00958 GMP synthase C terminal domain BD_RS09500 PF02540 NAD synthase BD_RS09505 PF00571 CBS domain BD_RS09505 PF00478 IMP dehydrogenase / GMP reductase domain BD_RS09510 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS09520 PF02254 TrkA-N domain BD_RS09520 PF00999 Sodium/hydrogen exchanger family BD_RS09530 PF04055 Radical SAM superfamily BD_RS09530 PF00919 Uncharacterized protein family UPF0004 BD_RS09530 PF01938 TRAM domain BD_RS09565 PF02803 Thiolase, C-terminal domain BD_RS09565 PF00108 Thiolase, N-terminal domain BD_RS09570 PF01144 Coenzyme A transferase BD_RS09575 PF01144 Coenzyme A transferase BD_RS09580 PF13302 Acetyltransferase (GNAT) domain BD_RS09580 PF00027 Cyclic nucleotide-binding domain BD_RS09585 PF00224 Pyruvate kinase, barrel domain BD_RS09585 PF00391 PEP-utilising enzyme, mobile domain BD_RS09585 PF02887 Pyruvate kinase, alpha/beta domain BD_RS09610 PF00216 Bacterial DNA-binding protein BD_RS09625 PF01323 DSBA-like thioredoxin domain BD_RS09645 PF04453 LPS transport system D BD_RS09645 PF03968 OstA-like protein BD_RS09660 PF01351 Ribonuclease HII BD_RS09665 PF01245 Ribosomal protein L19 BD_RS09670 PF09936 SAM-dependent RNA methyltransferase BD_RS09670 PF01746 tRNA (Guanine-1)-methyltransferase BD_RS09675 PF01746 tRNA (Guanine-1)-methyltransferase BD_RS09680 PF01782 RimM N-terminal domain BD_RS09690 PF00886 Ribosomal protein S16 BD_RS09695 PF02978 Signal peptide binding domain BD_RS09695 PF00448 SRP54-type protein, GTPase domain BD_RS09695 PF02881 SRP54-type protein, helical bundle domain BD_RS09715 PF01061 ABC-2 type transporter BD_RS09720 PF00005 ABC transporter BD_RS09725 PF00009 Elongation factor Tu GTP binding domain BD_RS09725 PF16658 Class II release factor RF3, C-terminal domain BD_RS09725 PF03144 Elongation factor Tu domain 2 BD_RS09730 PF00581 Rhodanese-like domain BD_RS09730 PF17773 UPF0176 acylphosphatase like domain BD_RS09730 PF12368 Rhodanase C-terminal BD_RS09755 PF01699 Sodium/calcium exchanger protein BD_RS09760 PF04102 SlyX BD_RS09770 PF00075 RNase H BD_RS09775 PF00196 Bacterial regulatory proteins, luxR family BD_RS09775 PF00072 Response regulator receiver domain BD_RS09780 PF00929 Exonuclease BD_RS09780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD_RS09780 PF11490 DNA polymerase III polC-type N-terminus II BD_RS09780 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD_RS09780 PF14579 Helix-hairpin-helix motif BD_RS09780 PF02811 PHP domain BD_RS09785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS09785 PF00512 His Kinase A (phospho-acceptor) domain BD_RS09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS09790 PF00512 His Kinase A (phospho-acceptor) domain BD_RS09790 PF00989 PAS fold BD_RS09795 PF00072 Response regulator receiver domain BD_RS09795 PF00486 Transcriptional regulatory protein, C terminal BD_RS09800 PF02190 ATP-dependent protease La (LON) substrate-binding domain BD_RS09800 PF05362 Lon protease (S16) C-terminal proteolytic domain BD_RS09800 PF00004 ATPase family associated with various cellular activities (AAA) BD_RS09805 PF03600 Citrate transporter BD_RS09805 PF02080 TrkA-C domain BD_RS09820 PF00881 Nitroreductase family BD_RS09830 PF05681 Fumarate hydratase (Fumerase) BD_RS09830 PF05683 Fumarase C-terminus BD_RS09845 PF00196 Bacterial regulatory proteins, luxR family BD_RS09845 PF00072 Response regulator receiver domain BD_RS09860 PF03060 Nitronate monooxygenase BD_RS09880 PF01925 Sulfite exporter TauE/SafE BD_RS09890 PF07690 Major Facilitator Superfamily BD_RS09895 PF00472 RF-1 domain BD_RS09905 PF12072 Domain of unknown function (DUF3552) BD_RS09905 PF01966 HD domain BD_RS09910 PF00072 Response regulator receiver domain BD_RS09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS09920 PF03471 Transporter associated domain BD_RS09920 PF00571 CBS domain BD_RS09920 PF01595 Cyclin M transmembrane N-terminal domain BD_RS09935 PF00654 Voltage gated chloride channel BD_RS09940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BD_RS09940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD_RS09940 PF09317 Domain of unknown function (DUF1974) BD_RS09940 PF02770 Acyl-CoA dehydrogenase, middle domain BD_RS09950 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BD_RS09950 PF06827 Zinc finger found in FPG and IleRS BD_RS09950 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BD_RS09985 PF07689 KaiB domain BD_RS09985 PF00512 His Kinase A (phospho-acceptor) domain BD_RS09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS10000 PF01343 Peptidase family S49 BD_RS10000 PF08496 Peptidase family S49 N-terminal BD_RS10005 PF00005 ABC transporter BD_RS10005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD_RS10010 PF00005 ABC transporter BD_RS10010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD_RS10015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD_RS10020 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS10025 PF12911 N-terminal TM domain of oligopeptide transport permease C BD_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS10040 PF02416 mttA/Hcf106 family BD_RS10045 PF00487 Fatty acid desaturase BD_RS10060 PF01272 Transcription elongation factor, GreA/GreB, C-term BD_RS10060 PF03449 Transcription elongation factor, N-terminal BD_RS10075 PF00753 Metallo-beta-lactamase superfamily BD_RS10075 PF16123 Hydroxyacylglutathione hydrolase C-terminus BD_RS10080 PF01370 NAD dependent epimerase/dehydratase family BD_RS10080 PF08338 Domain of unknown function (DUF1731) BD_RS10085 PF03441 FAD binding domain of DNA photolyase BD_RS10085 PF00875 DNA photolyase BD_RS10090 PF03109 ABC1 family BD_RS10095 PF00578 AhpC/TSA family BD_RS10120 PF01545 Cation efflux family BD_RS10125 PF02628 Cytochrome oxidase assembly protein BD_RS10125 PF01040 UbiA prenyltransferase family BD_RS10140 PF00293 NUDIX domain BD_RS10145 PF02690 Na+/Pi-cotransporter BD_RS10160 PF00403 Heavy-metal-associated domain BD_RS10165 PF02583 Metal-sensitive transcriptional repressor BD_RS10170 PF00873 AcrB/AcrD/AcrF family BD_RS10195 PF06508 Queuosine biosynthesis protein QueC BD_RS10200 PF17768 RecJ OB domain BD_RS10200 PF02272 DHHA1 domain BD_RS10200 PF01368 DHH family BD_RS10205 PF02355 Protein export membrane protein BD_RS10205 PF07549 SecD/SecF GG Motif BD_RS10210 PF07549 SecD/SecF GG Motif BD_RS10210 PF02355 Protein export membrane protein BD_RS10215 PF02699 Preprotein translocase subunit BD_RS10220 PF01702 Queuine tRNA-ribosyltransferase BD_RS10225 PF02547 Queuosine biosynthesis protein BD_RS10240 PF01645 Conserved region in glutamate synthase BD_RS10265 PF03631 Virulence factor BrkB BD_RS10270 PF01266 FAD dependent oxidoreductase BD_RS10270 PF00355 Rieske [2Fe-2S] domain BD_RS10295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD_RS10300 PF04679 ATP dependent DNA ligase C terminal region BD_RS10300 PF01068 ATP dependent DNA ligase domain BD_RS10300 PF13298 DNA polymerase Ligase (LigD) BD_RS10305 PF02735 Ku70/Ku80 beta-barrel domain BD_RS10310 PF00793 DAHP synthetase I family BD_RS10315 PF18389 TrmO C-terminal domain BD_RS10315 PF01980 tRNA-methyltransferase O BD_RS10320 PF08264 Anticodon-binding domain of tRNA BD_RS10320 PF00133 tRNA synthetases class I (I, L, M and V) BD_RS10330 PF00484 Carbonic anhydrase BD_RS10350 PF04107 Glutamate-cysteine ligase family 2(GCS2) BD_RS10365 PF00171 Aldehyde dehydrogenase family BD_RS10370 PF02254 TrkA-N domain BD_RS10370 PF00999 Sodium/hydrogen exchanger family BD_RS10375 PF00082 Subtilase family BD_RS10375 PF05922 Peptidase inhibitor I9 BD_RS10380 PF00535 Glycosyl transferase family 2 BD_RS10420 PF16657 Maltogenic Amylase, C-terminal domain BD_RS10420 PF00128 Alpha amylase, catalytic domain BD_RS10435 PF01899 Na+/H+ ion antiporter subunit BD_RS10440 PF00361 Proton-conducting membrane transporter BD_RS10445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BD_RS10450 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BD_RS10450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BD_RS10450 PF13244 Domain of unknown function (DUF4040) BD_RS10450 PF00361 Proton-conducting membrane transporter BD_RS10460 PF13419 Haloacid dehalogenase-like hydrolase BD_RS10515 PF01078 Magnesium chelatase, subunit ChlI BD_RS10515 PF13335 Magnesium chelatase, subunit ChlI C-terminal BD_RS10520 PF02899 Phage integrase, N-terminal SAM-like domain BD_RS10520 PF00589 Phage integrase family BD_RS10535 PF08486 Stage II sporulation protein BD_RS10540 PF01145 SPFH domain / Band 7 family BD_RS10570 PF03023 Lipid II flippase MurJ BD_RS10575 PF02151 UvrB/uvrC motif BD_RS10575 PF01541 GIY-YIG catalytic domain BD_RS10575 PF08459 UvrC Helix-hairpin-helix N-terminal BD_RS10580 PF12344 Ultra-violet resistance protein B BD_RS10580 PF02151 UvrB/uvrC motif BD_RS10580 PF17757 UvrB interaction domain BD_RS10580 PF04851 Type III restriction enzyme, res subunit BD_RS10580 PF00271 Helicase conserved C-terminal domain BD_RS10585 PF01804 Penicillin amidase BD_RS10600 PF01406 tRNA synthetases class I (C) catalytic domain BD_RS10600 PF09190 DALR domain BD_RS10605 PF00749 tRNA synthetases class I (E and Q), catalytic domain BD_RS10610 PF02559 CarD-like/TRCF domain BD_RS10615 PF00082 Subtilase family BD_RS10630 PF17191 RecG wedge domain BD_RS10630 PF00271 Helicase conserved C-terminal domain BD_RS10630 PF00270 DEAD/DEAH box helicase BD_RS10635 PF11871 Domain of unknown function (DUF3391) BD_RS10635 PF01966 HD domain BD_RS10650 PF01136 Peptidase family U32 BD_RS10650 PF16325 Peptidase family U32 C-terminal domain BD_RS10660 PF13614 AAA domain BD_RS10675 PF00089 Trypsin BD_RS10680 PF00072 Response regulator receiver domain BD_RS10680 PF09308 LuxQ, periplasmic BD_RS10680 PF00512 His Kinase A (phospho-acceptor) domain BD_RS10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS10695 PF00152 tRNA synthetases class II (D, K and N) BD_RS10695 PF01336 OB-fold nucleic acid binding domain BD_RS10700 PF01791 DeoC/LacD family aldolase BD_RS10705 PF01106 NifU-like domain BD_RS10705 PF04324 BFD-like [2Fe-2S] binding domain BD_RS10705 PF01592 NifU-like N terminal domain BD_RS10710 PF01554 MatE BD_RS10720 PF00083 Sugar (and other) transporter BD_RS10725 PF03109 ABC1 family BD_RS10735 PF03476 MOSC N-terminal beta barrel domain BD_RS10735 PF03473 MOSC domain BD_RS10735 PF00111 2Fe-2S iron-sulfur cluster binding domain BD_RS10750 PF08241 Methyltransferase domain BD_RS10765 PF00899 ThiF family BD_RS10770 PF01026 TatD related DNase BD_RS10780 PF09335 SNARE associated Golgi protein BD_RS10785 PF01479 S4 domain BD_RS10785 PF00849 RNA pseudouridylate synthase BD_RS10805 PF10672 S-adenosylmethionine-dependent methyltransferase BD_RS10805 PF02926 THUMP domain BD_RS10805 PF01170 Putative RNA methylase family UPF0020 BD_RS10825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BD_RS10830 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BD_RS10830 PF00534 Glycosyl transferases group 1 BD_RS10885 PF00654 Voltage gated chloride channel BD_RS10940 PF13091 PLD-like domain BD_RS10995 PF00486 Transcriptional regulatory protein, C terminal BD_RS10995 PF00072 Response regulator receiver domain BD_RS11015 PF01584 CheW-like domain BD_RS11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS11015 PF01627 Hpt domain BD_RS11015 PF00072 Response regulator receiver domain BD_RS11020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BD_RS11020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BD_RS11030 PF00072 Response regulator receiver domain BD_RS11040 PF00471 Ribosomal protein L33 BD_RS11080 PF00072 Response regulator receiver domain BD_RS11080 PF01966 HD domain BD_RS11110 PF00082 Subtilase family BD_RS11110 PF05922 Peptidase inhibitor I9 BD_RS11130 PF01569 PAP2 superfamily BD_RS11150 PF00175 Oxidoreductase NAD-binding domain BD_RS11150 PF00111 2Fe-2S iron-sulfur cluster binding domain BD_RS11150 PF00970 Oxidoreductase FAD-binding domain BD_RS11155 PF00892 EamA-like transporter family BD_RS11175 PF00005 ABC transporter BD_RS11175 PF17760 UvrA interaction domain BD_RS11175 PF17755 UvrA DNA-binding domain BD_RS11185 PF01475 Ferric uptake regulator family BD_RS11190 PF02649 Type I GTP cyclohydrolase folE2 BD_RS11195 PF02545 Maf-like protein BD_RS11200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD_RS11230 PF04085 rod shape-determining protein MreC BD_RS11240 PF00905 Penicillin binding protein transpeptidase domain BD_RS11240 PF03717 Penicillin-binding Protein dimerisation domain BD_RS11245 PF01098 Cell cycle protein BD_RS11250 PF01464 Transglycosylase SLT domain BD_RS11250 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BD_RS11275 PF00085 Thioredoxin BD_RS11290 PF02481 DNA recombination-mediator protein A BD_RS11290 PF17782 DprA winged helix domain BD_RS11310 PF03772 Competence protein BD_RS11310 PF00753 Metallo-beta-lactamase superfamily BD_RS11320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BD_RS11320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BD_RS11340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BD_RS11355 PF17864 RuvB AAA lid domain BD_RS11355 PF05491 RuvB C-terminal winged helix domain BD_RS11355 PF05496 Holliday junction DNA helicase RuvB P-loop domain BD_RS11360 PF01330 RuvA N terminal domain BD_RS11360 PF07499 RuvA, C-terminal domain BD_RS11365 PF02075 Crossover junction endodeoxyribonuclease RuvC BD_RS11375 PF01132 Elongation factor P (EF-P) OB domain BD_RS11375 PF08207 Elongation factor P (EF-P) KOW-like domain BD_RS11375 PF09285 Elongation factor P, C-terminal BD_RS11390 PF07244 Surface antigen variable number repeat BD_RS11390 PF01103 Surface antigen BD_RS11415 PF03972 MmgE/PrpD family BD_RS11425 PF02203 Tar ligand binding domain homologue BD_RS11425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS11425 PF00672 HAMP domain BD_RS11430 PF00672 HAMP domain BD_RS11430 PF02203 Tar ligand binding domain homologue BD_RS11430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS11435 PF00893 Small Multidrug Resistance protein BD_RS11440 PF03099 Biotin/lipoate A/B protein ligase family BD_RS11440 PF10437 Bacterial lipoate protein ligase C-terminus BD_RS11460 PF00285 Citrate synthase, C-terminal domain BD_RS11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS11485 PF03466 LysR substrate binding domain BD_RS11490 PF00578 AhpC/TSA family BD_RS11490 PF10417 C-terminal domain of 1-Cys peroxiredoxin BD_RS11495 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD_RS11495 PF13192 Thioredoxin domain BD_RS11500 PF00326 Prolyl oligopeptidase family BD_RS11510 PF11940 Domain of unknown function (DUF3458) Ig-like fold BD_RS11510 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BD_RS11510 PF01433 Peptidase family M1 domain BD_RS11515 PF01227 GTP cyclohydrolase I BD_RS11575 PF00089 Trypsin BD_RS11595 PF01593 Flavin containing amine oxidoreductase BD_RS11605 PF00664 ABC transporter transmembrane region BD_RS11605 PF00005 ABC transporter BD_RS11610 PF00664 ABC transporter transmembrane region BD_RS11610 PF00005 ABC transporter BD_RS11615 PF03448 MgtE intracellular N domain BD_RS11615 PF01769 Divalent cation transporter BD_RS11615 PF00571 CBS domain BD_RS11620 PF00082 Subtilase family BD_RS11660 PF00883 Cytosol aminopeptidase family, catalytic domain BD_RS11660 PF02789 Cytosol aminopeptidase family, N-terminal domain BD_RS11670 PF04379 ApaG domain BD_RS11720 PF00127 Copper binding proteins, plastocyanin/azurin family BD_RS11725 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BD_RS11725 PF01243 Pyridoxamine 5'-phosphate oxidase BD_RS11730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD_RS11730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BD_RS11735 PF00581 Rhodanese-like domain BD_RS11740 PF02769 AIR synthase related protein, C-terminal domain BD_RS11740 PF00586 AIR synthase related protein, N-terminal domain BD_RS11745 PF02416 mttA/Hcf106 family BD_RS11760 PF00072 Response regulator receiver domain BD_RS11760 PF00486 Transcriptional regulatory protein, C terminal BD_RS11765 PF00512 His Kinase A (phospho-acceptor) domain BD_RS11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS11765 PF18719 ArlS sensor domain BD_RS11795 PF00664 ABC transporter transmembrane region BD_RS11795 PF00005 ABC transporter BD_RS11800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BD_RS11800 PF00512 His Kinase A (phospho-acceptor) domain BD_RS11800 PF00072 Response regulator receiver domain BD_RS11800 PF01627 Hpt domain BD_RS11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS11800 PF00672 HAMP domain BD_RS11830 PF13545 Crp-like helix-turn-helix domain BD_RS11830 PF00027 Cyclic nucleotide-binding domain BD_RS11855 PF00672 HAMP domain BD_RS11855 PF02203 Tar ligand binding domain homologue BD_RS11855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS11860 PF00092 von Willebrand factor type A domain BD_RS11865 PF07728 AAA domain (dynein-related subfamily) BD_RS11865 PF08406 CbbQ/NirQ/NorQ C-terminal BD_RS11870 PF00115 Cytochrome C and Quinol oxidase polypeptide I BD_RS11875 PF00034 Cytochrome c BD_RS11895 PF02630 SCO1/SenC BD_RS11905 PF07732 Multicopper oxidase BD_RS11910 PF00403 Heavy-metal-associated domain BD_RS11920 PF00115 Cytochrome C and Quinol oxidase polypeptide I BD_RS11925 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BD_RS11925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BD_RS11930 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BD_RS11930 PF13746 4Fe-4S dicluster domain BD_RS11930 PF12801 4Fe-4S binding domain BD_RS11940 PF00691 OmpA family BD_RS11940 PF01389 OmpA-like transmembrane domain BD_RS11955 PF03466 LysR substrate binding domain BD_RS11955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS11960 PF00210 Ferritin-like domain BD_RS11965 PF02535 ZIP Zinc transporter BD_RS11970 PF00672 HAMP domain BD_RS11970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS11970 PF02203 Tar ligand binding domain homologue BD_RS11975 PF03616 Sodium/glutamate symporter BD_RS11995 PF00089 Trypsin BD_RS12010 PF00089 Trypsin BD_RS12020 PF00135 Carboxylesterase family BD_RS12025 PF01799 [2Fe-2S] binding domain BD_RS12025 PF00111 2Fe-2S iron-sulfur cluster binding domain BD_RS12030 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BD_RS12030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BD_RS12035 PF13478 XdhC Rossmann domain BD_RS12035 PF02625 XdhC and CoxI family BD_RS12040 PF13382 Adenine deaminase C-terminal domain BD_RS12040 PF01979 Amidohydrolase family BD_RS12050 PF01152 Bacterial-like globin BD_RS12060 PF00211 Adenylate and Guanylate cyclase catalytic domain BD_RS12080 PF00485 Phosphoribulokinase / Uridine kinase family BD_RS12085 PF05199 GMC oxidoreductase BD_RS12085 PF00732 GMC oxidoreductase BD_RS12090 PF00282 Pyridoxal-dependent decarboxylase conserved domain BD_RS12095 PF00593 TonB dependent receptor BD_RS12095 PF07660 Secretin and TonB N terminus short domain BD_RS12095 PF07715 TonB-dependent Receptor Plug Domain BD_RS12115 PF08274 PhnA Zinc-Ribbon BD_RS12115 PF03831 PhnA domain BD_RS12120 PF01048 Phosphorylase superfamily BD_RS12150 PF00072 Response regulator receiver domain BD_RS12150 PF01627 Hpt domain BD_RS12150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS12150 PF00512 His Kinase A (phospho-acceptor) domain BD_RS12150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BD_RS12150 PF00672 HAMP domain BD_RS12165 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD_RS12165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BD_RS12170 PF06224 Winged helix DNA-binding domain BD_RS12180 PF00004 ATPase family associated with various cellular activities (AAA) BD_RS12180 PF01434 Peptidase family M41 BD_RS12180 PF06480 FtsH Extracellular BD_RS12180 PF17862 AAA+ lid domain BD_RS12225 PF01145 SPFH domain / Band 7 family BD_RS12290 PF01979 Amidohydrolase family BD_RS12305 PF00378 Enoyl-CoA hydratase/isomerase BD_RS12310 PF00082 Subtilase family BD_RS12315 PF02673 Bacitracin resistance protein BacA BD_RS12320 PF00924 Mechanosensitive ion channel BD_RS12340 PF01520 N-acetylmuramoyl-L-alanine amidase BD_RS12340 PF11741 AMIN domain BD_RS12345 PF03725 3' exoribonuclease family, domain 2 BD_RS12345 PF01138 3' exoribonuclease family, domain 1 BD_RS12350 PF01725 Ham1 family BD_RS12365 PF03193 RsgA GTPase BD_RS12370 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BD_RS12370 PF14572 Phosphoribosyl synthetase-associated domain BD_RS12375 PF14693 Ribosomal protein TL5, C-terminal domain BD_RS12375 PF01386 Ribosomal L25p family BD_RS12380 PF01195 Peptidyl-tRNA hydrolase BD_RS12385 PF01926 50S ribosome-binding GTPase BD_RS12385 PF06071 Protein of unknown function (DUF933) BD_RS12390 PF01425 Amidase BD_RS12395 PF12911 N-terminal TM domain of oligopeptide transport permease C BD_RS12395 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS12400 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS12405 PF01464 Transglycosylase SLT domain BD_RS12405 PF14718 Soluble lytic murein transglycosylase L domain BD_RS12410 PF18073 Rubredoxin metal binding domain BD_RS12415 PF07885 Ion channel BD_RS12415 PF00027 Cyclic nucleotide-binding domain BD_RS12435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD_RS12435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD_RS12440 PF01553 Acyltransferase BD_RS12455 PF01979 Amidohydrolase family BD_RS12460 PF00011 Hsp20/alpha crystallin family BD_RS12485 PF00300 Histidine phosphatase superfamily (branch 1) BD_RS12490 PF02779 Transketolase, pyrimidine binding domain BD_RS12490 PF16870 2-oxoglutarate dehydrogenase C-terminal BD_RS12490 PF00676 Dehydrogenase E1 component BD_RS12490 PF16078 2-oxoglutarate dehydrogenase N-terminus BD_RS12495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BD_RS12495 PF00364 Biotin-requiring enzyme BD_RS12495 PF02817 e3 binding domain BD_RS12500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD_RS12500 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD_RS12565 PF00005 ABC transporter BD_RS12570 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS12580 PF01175 Urocanase Rossmann-like domain BD_RS12580 PF17391 Urocanase N-terminal domain BD_RS12580 PF17392 Urocanase C-terminal domain BD_RS12585 PF00221 Aromatic amino acid lyase BD_RS12595 PF00293 NUDIX domain BD_RS12600 PF00834 Ribulose-phosphate 3 epimerase family BD_RS12605 PF00551 Formyl transferase BD_RS12605 PF02911 Formyl transferase, C-terminal domain BD_RS12610 PF01327 Polypeptide deformylase BD_RS12625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BD_RS12625 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BD_RS12630 PF02237 Biotin protein ligase C terminal domain BD_RS12630 PF03099 Biotin/lipoate A/B protein ligase family BD_RS12630 PF08279 HTH domain BD_RS12655 PF04972 BON domain BD_RS12655 PF00691 OmpA family BD_RS12700 PF00743 Flavin-binding monooxygenase-like BD_RS12725 PF00330 Aconitase family (aconitate hydratase) BD_RS12725 PF00694 Aconitase C-terminal domain BD_RS12730 PF02146 Sir2 family BD_RS12775 PF07584 Aerotolerance regulator N-terminal BD_RS12775 PF00092 von Willebrand factor type A domain BD_RS12795 PF07726 ATPase family associated with various cellular activities (AAA) BD_RS12795 PF17863 AAA lid domain BD_RS12800 PF01435 Peptidase family M48 BD_RS12810 PF13180 PDZ domain BD_RS12815 PF04026 SpoVG BD_RS12855 PF13419 Haloacid dehalogenase-like hydrolase BD_RS12870 PF08240 Alcohol dehydrogenase GroES-like domain BD_RS12870 PF00107 Zinc-binding dehydrogenase BD_RS12885 PF12795 Mechanosensitive ion channel porin domain BD_RS12885 PF12794 Mechanosensitive ion channel inner membrane domain 1 BD_RS12885 PF00924 Mechanosensitive ion channel BD_RS12905 PF00849 RNA pseudouridylate synthase BD_RS12920 PF03264 NapC/NirT cytochrome c family, N-terminal region BD_RS12925 PF02335 Cytochrome c552 BD_RS12940 PF01584 CheW-like domain BD_RS12945 PF03975 CheD chemotactic sensory transduction BD_RS12950 PF03705 CheR methyltransferase, all-alpha domain BD_RS12950 PF01739 CheR methyltransferase, SAM binding domain BD_RS12955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS12955 PF08447 PAS fold BD_RS12955 PF13426 PAS domain BD_RS12965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS12965 PF09456 RcsC Alpha-Beta-Loop (ABL) BD_RS12965 PF00512 His Kinase A (phospho-acceptor) domain BD_RS12965 PF00072 Response regulator receiver domain BD_RS12970 PF03949 Malic enzyme, NAD binding domain BD_RS12970 PF00390 Malic enzyme, N-terminal domain BD_RS12980 PF04264 YceI-like domain BD_RS12985 PF00196 Bacterial regulatory proteins, luxR family BD_RS12985 PF00072 Response regulator receiver domain BD_RS12990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS12990 PF00512 His Kinase A (phospho-acceptor) domain BD_RS13000 PF04303 PrpF protein BD_RS13010 PF17149 Periplasmic sensor domain found in signal transduction proteins BD_RS13010 PF00072 Response regulator receiver domain BD_RS13010 PF01627 Hpt domain BD_RS13010 PF00512 His Kinase A (phospho-acceptor) domain BD_RS13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS13010 PF00672 HAMP domain BD_RS13015 PF04073 Aminoacyl-tRNA editing domain BD_RS13030 PF00912 Transglycosylase BD_RS13035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD_RS13040 PF09308 LuxQ, periplasmic BD_RS13040 PF00512 His Kinase A (phospho-acceptor) domain BD_RS13040 PF00072 Response regulator receiver domain BD_RS13040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS13060 PF01139 tRNA-splicing ligase RtcB BD_RS13075 PF00206 Lyase BD_RS13075 PF10415 Fumarase C C-terminus BD_RS13080 PF12706 Beta-lactamase superfamily domain BD_RS13095 PF05175 Methyltransferase small domain BD_RS13195 PF00571 CBS domain BD_RS13200 PF00884 Sulfatase BD_RS13210 PF00462 Glutaredoxin BD_RS13220 PF02913 FAD linked oxidases, C-terminal domain BD_RS13220 PF01565 FAD binding domain BD_RS13230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD_RS13230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD_RS13235 PF00072 Response regulator receiver domain BD_RS13235 PF02954 Bacterial regulatory protein, Fis family BD_RS13235 PF00158 Sigma-54 interaction domain BD_RS13250 PF00753 Metallo-beta-lactamase superfamily BD_RS13255 PF03631 Virulence factor BrkB BD_RS13275 PF01546 Peptidase family M20/M25/M40 BD_RS13275 PF07687 Peptidase dimerisation domain BD_RS13300 PF03466 LysR substrate binding domain BD_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS13305 PF05368 NmrA-like family BD_RS13335 PF05192 MutS domain III BD_RS13335 PF01624 MutS domain I BD_RS13335 PF00488 MutS domain V BD_RS13335 PF05190 MutS family domain IV BD_RS13380 PF00958 GMP synthase C terminal domain BD_RS13380 PF00117 Glutamine amidotransferase class-I BD_RS13380 PF02540 NAD synthase BD_RS13395 PF18158 Adaptive response protein AidB N-terminal domain BD_RS13395 PF02770 Acyl-CoA dehydrogenase, middle domain BD_RS13395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BD_RS13465 PF01050 Mannose-6-phosphate isomerase BD_RS13465 PF00483 Nucleotidyl transferase BD_RS13495 PF00578 AhpC/TSA family BD_RS13500 PF01196 Ribosomal protein L17 BD_RS13505 PF01000 RNA polymerase Rpb3/RpoA insert domain BD_RS13505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BD_RS13505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BD_RS13510 PF01479 S4 domain BD_RS13510 PF00163 Ribosomal protein S4/S9 N-terminal domain BD_RS13515 PF00411 Ribosomal protein S11 BD_RS13520 PF00416 Ribosomal protein S13/S18 BD_RS13525 PF05191 Adenylate kinase, active site lid BD_RS13530 PF00344 SecY translocase BD_RS13535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BD_RS13540 PF00327 Ribosomal protein L30p/L7e BD_RS13545 PF03719 Ribosomal protein S5, C-terminal domain BD_RS13545 PF00333 Ribosomal protein S5, N-terminal domain BD_RS13550 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BD_RS13555 PF00347 Ribosomal protein L6 BD_RS13560 PF00410 Ribosomal protein S8 BD_RS13565 PF00253 Ribosomal protein S14p/S29e BD_RS13570 PF00673 ribosomal L5P family C-terminus BD_RS13570 PF00281 Ribosomal protein L5 BD_RS13575 PF00238 Ribosomal protein L14p/L23e BD_RS13580 PF00366 Ribosomal protein S17 BD_RS13585 PF00831 Ribosomal L29 protein BD_RS13590 PF00252 Ribosomal protein L16p/L10e BD_RS13595 PF07650 KH domain BD_RS13595 PF00189 Ribosomal protein S3, C-terminal domain BD_RS13600 PF00237 Ribosomal protein L22p/L17e BD_RS13605 PF00203 Ribosomal protein S19 BD_RS13610 PF00181 Ribosomal Proteins L2, RNA binding domain BD_RS13610 PF03947 Ribosomal Proteins L2, C-terminal domain BD_RS13615 PF00276 Ribosomal protein L23 BD_RS13620 PF00573 Ribosomal protein L4/L1 family BD_RS13625 PF00297 Ribosomal protein L3 BD_RS13630 PF00338 Ribosomal protein S10p/S20e BD_RS13635 PF03144 Elongation factor Tu domain 2 BD_RS13635 PF03764 Elongation factor G, domain IV BD_RS13635 PF14492 Elongation Factor G, domain II BD_RS13635 PF00009 Elongation factor Tu GTP binding domain BD_RS13635 PF00679 Elongation factor G C-terminus BD_RS13640 PF00177 Ribosomal protein S7p/S5e BD_RS13645 PF00164 Ribosomal protein S12/S23 BD_RS13650 PF04998 RNA polymerase Rpb1, domain 5 BD_RS13650 PF00623 RNA polymerase Rpb1, domain 2 BD_RS13650 PF04983 RNA polymerase Rpb1, domain 3 BD_RS13650 PF04997 RNA polymerase Rpb1, domain 1 BD_RS13650 PF05000 RNA polymerase Rpb1, domain 4 BD_RS13655 PF04565 RNA polymerase Rpb2, domain 3 BD_RS13655 PF04561 RNA polymerase Rpb2, domain 2 BD_RS13655 PF04563 RNA polymerase beta subunit BD_RS13655 PF04560 RNA polymerase Rpb2, domain 7 BD_RS13655 PF00562 RNA polymerase Rpb2, domain 6 BD_RS13655 PF10385 RNA polymerase beta subunit external 1 domain BD_RS13665 PF00542 Ribosomal protein L7/L12 C-terminal domain BD_RS13665 PF16320 Ribosomal protein L7/L12 dimerisation domain BD_RS13670 PF00466 Ribosomal protein L10 BD_RS13675 PF00687 Ribosomal protein L1p/L10e family BD_RS13680 PF03946 Ribosomal protein L11, N-terminal domain BD_RS13680 PF00298 Ribosomal protein L11, RNA binding domain BD_RS13685 PF02357 Transcription termination factor nusG BD_RS13685 PF00467 KOW motif BD_RS13690 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BD_RS13700 PF03143 Elongation factor Tu C-terminal domain BD_RS13700 PF03144 Elongation factor Tu domain 2 BD_RS13700 PF00009 Elongation factor Tu GTP binding domain BD_RS13725 PF00588 SpoU rRNA Methylase family BD_RS13725 PF08032 RNA 2'-O ribose methyltransferase substrate binding BD_RS13730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BD_RS13755 PF02769 AIR synthase related protein, C-terminal domain BD_RS13755 PF00586 AIR synthase related protein, N-terminal domain BD_RS13760 PF01808 AICARFT/IMPCHase bienzyme BD_RS13760 PF02142 MGS-like domain BD_RS13770 PF02769 AIR synthase related protein, C-terminal domain BD_RS13770 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BD_RS13770 PF00586 AIR synthase related protein, N-terminal domain BD_RS13775 PF00551 Formyl transferase BD_RS13780 PF02843 Phosphoribosylglycinamide synthetase, C domain BD_RS13780 PF02844 Phosphoribosylglycinamide synthetase, N domain BD_RS13780 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BD_RS13790 PF00731 AIR carboxylase BD_RS13795 PF00156 Phosphoribosyl transferase domain BD_RS13845 PF00691 OmpA family BD_RS13845 PF13677 Membrane MotB of proton-channel complex MotA/MotB BD_RS13910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD_RS13910 PF03129 Anticodon binding domain BD_RS13910 PF09180 Prolyl-tRNA synthetase, C-terminal BD_RS13915 PF00158 Sigma-54 interaction domain BD_RS13915 PF00072 Response regulator receiver domain BD_RS13915 PF02954 Bacterial regulatory protein, Fis family BD_RS13920 PF00672 HAMP domain BD_RS13920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS13920 PF00512 His Kinase A (phospho-acceptor) domain BD_RS13920 PF00989 PAS fold BD_RS13925 PF00885 6,7-dimethyl-8-ribityllumazine synthase BD_RS13930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BD_RS13930 PF00925 GTP cyclohydrolase II BD_RS13935 PF00677 Lumazine binding domain BD_RS13965 PF02142 MGS-like domain BD_RS13970 PF00004 ATPase family associated with various cellular activities (AAA) BD_RS13970 PF10431 C-terminal, D2-small domain, of ClpB protein BD_RS13970 PF02861 Clp amino terminal domain, pathogenicity island component BD_RS13970 PF17871 AAA lid domain BD_RS13970 PF07724 AAA domain (Cdc48 subfamily) BD_RS13980 PF00700 Bacterial flagellin C-terminal helical region BD_RS13980 PF00669 Bacterial flagellin N-terminal helical region BD_RS14000 PF00072 Response regulator receiver domain BD_RS14000 PF00486 Transcriptional regulatory protein, C terminal BD_RS14005 PF01047 MarR family BD_RS14010 PF00873 AcrB/AcrD/AcrF family BD_RS14035 PF00158 Sigma-54 interaction domain BD_RS14035 PF02954 Bacterial regulatory protein, Fis family BD_RS14035 PF00072 Response regulator receiver domain BD_RS14040 PF02899 Phage integrase, N-terminal SAM-like domain BD_RS14040 PF00589 Phage integrase family BD_RS14045 PF11967 Recombination protein O N terminal BD_RS14045 PF02565 Recombination protein O C terminal BD_RS14095 PF03466 LysR substrate binding domain BD_RS14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS14100 PF03741 Integral membrane protein TerC family BD_RS14105 PF02834 LigT like Phosphoesterase BD_RS14115 PF12838 4Fe-4S dicluster domain BD_RS14120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BD_RS14120 PF01568 Molydopterin dinucleotide binding domain BD_RS14120 PF00384 Molybdopterin oxidoreductase BD_RS14120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD_RS14125 PF10531 SLBB domain BD_RS14125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BD_RS14125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BD_RS14135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BD_RS14135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BD_RS14140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD_RS14145 PF00082 Subtilase family BD_RS14150 PF04264 YceI-like domain BD_RS14155 PF05114 Protein of unknown function (DUF692) BD_RS14165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS14165 PF17200 Single Cache domain 2 BD_RS14165 PF00672 HAMP domain BD_RS14185 PF00698 Acyl transferase domain BD_RS14195 PF00664 ABC transporter transmembrane region BD_RS14195 PF00005 ABC transporter BD_RS14220 PF00528 Binding-protein-dependent transport system inner membrane component BD_RS14225 PF00005 ABC transporter BD_RS14240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BD_RS14245 PF00270 DEAD/DEAH box helicase BD_RS14245 PF04408 Helicase associated domain (HA2) BD_RS14245 PF08482 ATP-dependent helicase C-terminal BD_RS14245 PF00271 Helicase conserved C-terminal domain BD_RS14260 PF00163 Ribosomal protein S4/S9 N-terminal domain BD_RS14260 PF01479 S4 domain BD_RS14270 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS14275 PF01966 HD domain BD_RS14275 PF01336 OB-fold nucleic acid binding domain BD_RS14295 PF00005 ABC transporter BD_RS14300 PF02405 Permease MlaE BD_RS14305 PF01168 Alanine racemase, N-terminal domain BD_RS14305 PF00842 Alanine racemase, C-terminal domain BD_RS14315 PF00989 PAS fold BD_RS14315 PF00512 His Kinase A (phospho-acceptor) domain BD_RS14315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS14320 PF02910 Fumarate reductase flavoprotein C-term BD_RS14320 PF00890 FAD binding domain BD_RS14335 PF00106 short chain dehydrogenase BD_RS14340 PF00075 RNase H BD_RS14375 PF13361 UvrD-like helicase C-terminal domain BD_RS14375 PF00580 UvrD/REP helicase N-terminal domain BD_RS14415 PF01121 Dephospho-CoA kinase BD_RS14420 PF00069 Protein kinase domain BD_RS14425 PF00501 AMP-binding enzyme BD_RS14430 PF00551 Formyl transferase BD_RS14430 PF02911 Formyl transferase, C-terminal domain BD_RS14435 PF13193 AMP-binding enzyme C-terminal domain BD_RS14435 PF00501 AMP-binding enzyme BD_RS14445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BD_RS14445 PF00391 PEP-utilising enzyme, mobile domain BD_RS14475 PF00202 Aminotransferase class-III BD_RS14480 PF01370 NAD dependent epimerase/dehydratase family BD_RS14495 PF12704 MacB-like periplasmic core domain BD_RS14495 PF02687 FtsX-like permease family BD_RS14500 PF00005 ABC transporter BD_RS14500 PF12704 MacB-like periplasmic core domain BD_RS14500 PF02687 FtsX-like permease family BD_RS14525 PF01432 Peptidase family M3 BD_RS14530 PF01513 ATP-NAD kinase BD_RS14535 PF02463 RecF/RecN/SMC N terminal domain BD_RS14545 PF00326 Prolyl oligopeptidase family BD_RS14545 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BD_RS14555 PF00672 HAMP domain BD_RS14555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS14560 PF00330 Aconitase family (aconitate hydratase) BD_RS14560 PF00694 Aconitase C-terminal domain BD_RS14565 PF00293 NUDIX domain BD_RS14590 PF04209 homogentisate 1,2-dioxygenase BD_RS14605 PF00149 Calcineurin-like phosphoesterase BD_RS14610 PF12327 FtsZ family, C-terminal domain BD_RS14610 PF00091 Tubulin/FtsZ family, GTPase domain BD_RS14615 PF02491 SHS2 domain inserted in FTSA BD_RS14620 PF08478 POTRA domain, FtsQ-type BD_RS14620 PF03799 Cell division protein FtsQ BD_RS14625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS14625 PF00672 HAMP domain BD_RS14625 PF02203 Tar ligand binding domain homologue BD_RS14640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD_RS14640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD_RS14645 PF01225 Mur ligase family, catalytic domain BD_RS14645 PF02875 Mur ligase family, glutamate ligase domain BD_RS14645 PF08245 Mur ligase middle domain BD_RS14650 PF03033 Glycosyltransferase family 28 N-terminal domain BD_RS14650 PF04101 Glycosyltransferase family 28 C-terminal domain BD_RS14655 PF01098 Cell cycle protein BD_RS14665 PF02875 Mur ligase family, glutamate ligase domain BD_RS14665 PF08245 Mur ligase middle domain BD_RS14670 PF00953 Glycosyl transferase family 4 BD_RS14680 PF01225 Mur ligase family, catalytic domain BD_RS14680 PF02875 Mur ligase family, glutamate ligase domain BD_RS14680 PF08245 Mur ligase middle domain BD_RS14685 PF01225 Mur ligase family, catalytic domain BD_RS14685 PF02875 Mur ligase family, glutamate ligase domain BD_RS14685 PF08245 Mur ligase middle domain BD_RS14710 PF00271 Helicase conserved C-terminal domain BD_RS14710 PF16124 RecQ zinc-binding BD_RS14710 PF00570 HRDC domain BD_RS14710 PF00270 DEAD/DEAH box helicase BD_RS14710 PF09382 RQC domain BD_RS14715 PF00905 Penicillin binding protein transpeptidase domain BD_RS14720 PF00905 Penicillin binding protein transpeptidase domain BD_RS14720 PF03717 Penicillin-binding Protein dimerisation domain BD_RS14730 PF01795 MraW methylase family BD_RS14745 PF00156 Phosphoribosyl transferase domain BD_RS14760 PF01169 Uncharacterized protein family UPF0016 BD_RS14780 PF17954 Quercetinase C-terminal cupin domain BD_RS14780 PF02678 Pirin BD_RS14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS14785 PF03466 LysR substrate binding domain BD_RS14790 PF00303 Thymidylate synthase BD_RS14795 PF00186 Dihydrofolate reductase BD_RS14805 PF01565 FAD binding domain BD_RS14805 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BD_RS14810 PF00246 Zinc carboxypeptidase BD_RS14820 PF00043 Glutathione S-transferase, C-terminal domain BD_RS14820 PF13417 Glutathione S-transferase, N-terminal domain BD_RS14825 PF00082 Subtilase family BD_RS14825 PF00082 Subtilase family BD_RS14845 PF13977 BetI-type transcriptional repressor, C-terminal BD_RS14845 PF00440 Bacterial regulatory proteins, tetR family BD_RS14850 PF01551 Peptidase family M23 BD_RS14850 PF10145 Phage-related minor tail protein BD_RS14850 PF01464 Transglycosylase SLT domain BD_RS14855 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BD_RS14860 PF01252 Signal peptidase (SPase) II BD_RS14875 PF16360 GTP-binding GTPase Middle Region BD_RS14875 PF01926 50S ribosome-binding GTPase BD_RS14875 PF13167 GTP-binding GTPase N-terminal BD_RS14885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD_RS14885 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD_RS14885 PF11490 DNA polymerase III polC-type N-terminus II BD_RS14885 PF14579 Helix-hairpin-helix motif BD_RS14885 PF02811 PHP domain BD_RS14885 PF14480 DNA polymerase III polC-type N-terminus I BD_RS14885 PF00929 Exonuclease BD_RS14895 PF00691 OmpA family BD_RS14895 PF13677 Membrane MotB of proton-channel complex MotA/MotB BD_RS14900 PF01618 MotA/TolQ/ExbB proton channel family BD_RS14905 PF11412 Disulphide bond corrector protein DsbC BD_RS14905 PF02683 Cytochrome C biogenesis protein transmembrane region BD_RS14910 PF02203 Tar ligand binding domain homologue BD_RS14910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS14910 PF00672 HAMP domain BD_RS14940 PF01479 S4 domain BD_RS14940 PF00849 RNA pseudouridylate synthase BD_RS14975 PF04452 RNA methyltransferase BD_RS14985 PF00294 pfkB family carbohydrate kinase BD_RS14985 PF01467 Cytidylyltransferase-like BD_RS15005 PF01522 Polysaccharide deacetylase BD_RS15040 PF00012 Hsp70 protein BD_RS15050 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BD_RS15055 PF02230 Phospholipase/Carboxylesterase BD_RS15060 PF12823 Domain of unknown function (DUF3817) BD_RS15070 PF10672 S-adenosylmethionine-dependent methyltransferase BD_RS15070 PF17785 PUA-like domain BD_RS15080 PF00355 Rieske [2Fe-2S] domain BD_RS15085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BD_RS15085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BD_RS15130 PF02954 Bacterial regulatory protein, Fis family BD_RS15130 PF00158 Sigma-54 interaction domain BD_RS15130 PF00072 Response regulator receiver domain BD_RS15135 PF13629 Pilus formation protein N terminal region BD_RS15135 PF04972 BON domain BD_RS15135 PF00263 Bacterial type II and III secretion system protein BD_RS15140 PF00437 Type II/IV secretion system protein BD_RS15160 PF00152 tRNA synthetases class II (D, K and N) BD_RS15160 PF02938 GAD domain BD_RS15160 PF01336 OB-fold nucleic acid binding domain BD_RS15170 PF00140 Sigma-70 factor, region 1.2 BD_RS15170 PF04542 Sigma-70 region 2 BD_RS15170 PF04545 Sigma-70, region 4 BD_RS15185 PF04542 Sigma-70 region 2 BD_RS15185 PF04539 Sigma-70 region 3 BD_RS15185 PF04545 Sigma-70, region 4 BD_RS15190 PF10609 NUBPL iron-transfer P-loop NTPase BD_RS15195 PF00448 SRP54-type protein, GTPase domain BD_RS15200 PF00771 FHIPEP family BD_RS15205 PF01312 FlhB HrpN YscU SpaS Family BD_RS15210 PF01311 Bacterial export proteins, family 1 BD_RS15215 PF01313 Bacterial export proteins, family 3 BD_RS15220 PF00813 FliP family BD_RS15230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BD_RS15235 PF02154 Flagellar motor switch protein FliM BD_RS15235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BD_RS15245 PF05532 CsbD-like BD_RS15265 PF00459 Inositol monophosphatase family BD_RS15285 PF00580 UvrD/REP helicase N-terminal domain BD_RS15285 PF13361 UvrD-like helicase C-terminal domain BD_RS15295 PF00672 HAMP domain BD_RS15295 PF02203 Tar ligand binding domain homologue BD_RS15295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS15300 PF00700 Bacterial flagellin C-terminal helical region BD_RS15300 PF00669 Bacterial flagellin N-terminal helical region BD_RS15305 PF12544 Lysine-2,3-aminomutase BD_RS15305 PF04055 Radical SAM superfamily BD_RS15335 PF00912 Transglycosylase BD_RS15335 PF00905 Penicillin binding protein transpeptidase domain BD_RS15335 PF14814 Bifunctional transglycosylase second domain BD_RS15350 PF00175 Oxidoreductase NAD-binding domain BD_RS15350 PF00970 Oxidoreductase FAD-binding domain BD_RS15350 PF00111 2Fe-2S iron-sulfur cluster binding domain BD_RS15370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS15370 PF00512 His Kinase A (phospho-acceptor) domain BD_RS15370 PF16736 Single Cache-like BD_RS15370 PF00989 PAS fold BD_RS15375 PF00158 Sigma-54 interaction domain BD_RS15375 PF02954 Bacterial regulatory protein, Fis family BD_RS15375 PF00072 Response regulator receiver domain BD_RS15390 PF01252 Signal peptidase (SPase) II BD_RS15395 PF00072 Response regulator receiver domain BD_RS15400 PF00512 His Kinase A (phospho-acceptor) domain BD_RS15400 PF08447 PAS fold BD_RS15400 PF00989 PAS fold BD_RS15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS15420 PF01297 Zinc-uptake complex component A periplasmic BD_RS15425 PF00005 ABC transporter BD_RS15440 PF01790 Prolipoprotein diacylglyceryl transferase BD_RS15460 PF03884 DNA gyrase inhibitor YacG BD_RS15465 PF00216 Bacterial DNA-binding protein BD_RS15470 PF00365 Phosphofructokinase BD_RS15475 PF13458 Periplasmic binding protein BD_RS15480 PF02653 Branched-chain amino acid transport system / permease component BD_RS15485 PF02653 Branched-chain amino acid transport system / permease component BD_RS15485 PF11862 Domain of unknown function (DUF3382) BD_RS15490 PF12399 Branched-chain amino acid ATP-binding cassette transporter BD_RS15490 PF00005 ABC transporter BD_RS15495 PF00005 ABC transporter BD_RS15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS15515 PF00512 His Kinase A (phospho-acceptor) domain BD_RS15520 PF00486 Transcriptional regulatory protein, C terminal BD_RS15520 PF00072 Response regulator receiver domain BD_RS15525 PF07559 Flagellar basal body protein FlaE BD_RS15525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD_RS15525 PF00460 Flagella basal body rod protein BD_RS15535 PF13860 FlgD Ig-like domain BD_RS15535 PF13861 FlgD Tudor-like domain BD_RS15535 PF03963 Flagellar hook capping protein - N-terminal region BD_RS15555 PF18269 T3SS EscN ATPase C-terminal domain BD_RS15555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD_RS15555 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD_RS15560 PF02108 Flagellar assembly protein FliH BD_RS15565 PF01706 FliG C-terminal domain BD_RS15565 PF14842 FliG N-terminal domain BD_RS15565 PF14841 FliG middle domain BD_RS15570 PF08345 Flagellar M-ring protein C-terminal BD_RS15570 PF01514 Secretory protein of YscJ/FliF family BD_RS15575 PF02049 Flagellar hook-basal body complex protein FliE BD_RS15580 PF00460 Flagella basal body rod protein BD_RS15580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD_RS15585 PF00460 Flagella basal body rod protein BD_RS15590 PF02954 Bacterial regulatory protein, Fis family BD_RS15590 PF00158 Sigma-54 interaction domain BD_RS15605 PF02405 Permease MlaE BD_RS15610 PF00005 ABC transporter BD_RS15645 PF01134 Glucose inhibited division protein A BD_RS15650 PF00265 Thymidine kinase BD_RS15655 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD_RS15655 PF01464 Transglycosylase SLT domain BD_RS15670 PF01380 SIS domain BD_RS15675 PF12804 MobA-like NTP transferase domain BD_RS15675 PF00132 Bacterial transferase hexapeptide (six repeats) BD_RS15680 PF00246 Zinc carboxypeptidase BD_RS15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS15690 PF00512 His Kinase A (phospho-acceptor) domain BD_RS15690 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD_RS15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS15695 PF00512 His Kinase A (phospho-acceptor) domain BD_RS15695 PF09308 LuxQ, periplasmic BD_RS15695 PF00072 Response regulator receiver domain BD_RS15700 PF00072 Response regulator receiver domain BD_RS15705 PF02954 Bacterial regulatory protein, Fis family BD_RS15705 PF00072 Response regulator receiver domain BD_RS15705 PF00158 Sigma-54 interaction domain BD_RS15720 PF00491 Arginase family BD_RS15725 PF00730 HhH-GPD superfamily base excision DNA repair protein BD_RS15725 PF00633 Helix-hairpin-helix motif BD_RS15725 PF14815 NUDIX domain BD_RS15760 PF00490 Delta-aminolevulinic acid dehydratase BD_RS15765 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BD_RS15765 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BD_RS15765 PF01488 Shikimate / quinate 5-dehydrogenase BD_RS15770 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BD_RS15770 PF03900 Porphobilinogen deaminase, C-terminal domain BD_RS15775 PF00202 Aminotransferase class-III BD_RS15780 PF17149 Periplasmic sensor domain found in signal transduction proteins BD_RS15780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS15780 PF00512 His Kinase A (phospho-acceptor) domain BD_RS15780 PF01627 Hpt domain BD_RS15780 PF00672 HAMP domain BD_RS15780 PF00072 Response regulator receiver domain BD_RS15785 PF00072 Response regulator receiver domain BD_RS15785 PF00486 Transcriptional regulatory protein, C terminal BD_RS15790 PF01208 Uroporphyrinogen decarboxylase (URO-D) BD_RS15795 PF04055 Radical SAM superfamily BD_RS15795 PF06969 HemN C-terminal domain BD_RS15800 PF01593 Flavin containing amine oxidoreductase BD_RS15805 PF00762 Ferrochelatase BD_RS15810 PF04172 LrgB-like family BD_RS15815 PF03788 LrgA family BD_RS15830 PF00271 Helicase conserved C-terminal domain BD_RS15830 PF00270 DEAD/DEAH box helicase BD_RS15835 PF12697 Alpha/beta hydrolase family BD_RS15840 PF01743 Poly A polymerase head domain BD_RS15840 PF12626 Polymerase A arginine-rich C-terminus BD_RS15840 PF12627 Probable RNA and SrmB- binding site of polymerase A BD_RS15850 PF00326 Prolyl oligopeptidase family BD_RS15850 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BD_RS15855 PF01339 CheB methylesterase BD_RS15855 PF00072 Response regulator receiver domain BD_RS15860 PF01739 CheR methyltransferase, SAM binding domain BD_RS15860 PF03705 CheR methyltransferase, all-alpha domain BD_RS15865 PF02895 Signal transducing histidine kinase, homodimeric domain BD_RS15865 PF01627 Hpt domain BD_RS15865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS15865 PF01584 CheW-like domain BD_RS15865 PF09078 CheY binding BD_RS15870 PF01584 CheW-like domain BD_RS15890 PF02779 Transketolase, pyrimidine binding domain BD_RS15890 PF02780 Transketolase, C-terminal domain BD_RS15890 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BD_RS15895 PF00962 Adenosine/AMP deaminase BD_RS15910 PF00561 alpha/beta hydrolase fold BD_RS15925 PF12697 Alpha/beta hydrolase family BD_RS15930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BD_RS15935 PF00425 chorismate binding enzyme BD_RS15935 PF04715 Anthranilate synthase component I, N terminal region BD_RS15940 PF00793 DAHP synthetase I family BD_RS15940 PF01817 Chorismate mutase type II BD_RS15945 PF01209 ubiE/COQ5 methyltransferase family BD_RS15950 PF00595 PDZ domain BD_RS15965 PF00072 Response regulator receiver domain BD_RS15965 PF00158 Sigma-54 interaction domain BD_RS15975 PF00378 Enoyl-CoA hydratase/isomerase BD_RS15980 PF01264 Chorismate synthase BD_RS15985 PF01202 Shikimate kinase BD_RS15990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BD_RS15995 PF01761 3-dehydroquinate synthase BD_RS16000 PF01761 3-dehydroquinate synthase BD_RS16015 PF03167 Uracil DNA glycosylase superfamily BD_RS16025 PF00248 Aldo/keto reductase family BD_RS16030 PF00149 Calcineurin-like phosphoesterase BD_RS16070 PF00263 Bacterial type II and III secretion system protein BD_RS16070 PF03958 Bacterial type II/III secretion system short domain BD_RS16075 PF01726 LexA DNA binding domain BD_RS16075 PF00717 Peptidase S24-like BD_RS16085 PF02678 Pirin BD_RS16085 PF17954 Quercetinase C-terminal cupin domain BD_RS16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS16090 PF03466 LysR substrate binding domain BD_RS16095 PF13185 GAF domain BD_RS16115 PF00440 Bacterial regulatory proteins, tetR family BD_RS16130 PF03372 Endonuclease/Exonuclease/phosphatase family BD_RS16135 PF10417 C-terminal domain of 1-Cys peroxiredoxin BD_RS16135 PF00578 AhpC/TSA family BD_RS16145 PF00072 Response regulator receiver domain BD_RS16145 PF00486 Transcriptional regulatory protein, C terminal BD_RS16150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS16150 PF00072 Response regulator receiver domain BD_RS16150 PF01627 Hpt domain BD_RS16150 PF00512 His Kinase A (phospho-acceptor) domain BD_RS16180 PF03572 Peptidase family S41 BD_RS16180 PF01471 Putative peptidoglycan binding domain BD_RS16180 PF17820 PDZ domain BD_RS16185 PF01370 NAD dependent epimerase/dehydratase family BD_RS16190 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BD_RS16195 PF00588 SpoU rRNA Methylase family BD_RS16220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD_RS16220 PF01872 RibD C-terminal domain BD_RS16225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BD_RS16235 PF05970 PIF1-like helicase BD_RS16250 PF11127 Protein of unknown function (DUF2892) BD_RS16250 PF00581 Rhodanese-like domain BD_RS16295 PF02548 Ketopantoate hydroxymethyltransferase BD_RS16300 PF02569 Pantoate-beta-alanine ligase BD_RS16305 PF02441 Flavoprotein BD_RS16305 PF04127 DNA / pantothenate metabolism flavoprotein BD_RS16310 PF03309 Type III pantothenate kinase BD_RS16315 PF02261 Aspartate decarboxylase BD_RS16320 PF00005 ABC transporter BD_RS16320 PF12848 ABC transporter BD_RS16335 PF12848 ABC transporter BD_RS16335 PF00005 ABC transporter BD_RS16335 PF16326 ABC transporter C-terminal domain BD_RS16345 PF00593 TonB dependent receptor BD_RS16345 PF07715 TonB-dependent Receptor Plug Domain BD_RS16360 PF14718 Soluble lytic murein transglycosylase L domain BD_RS16360 PF01464 Transglycosylase SLT domain BD_RS16365 PF00682 HMGL-like BD_RS16370 PF00364 Biotin-requiring enzyme BD_RS16370 PF02436 Conserved carboxylase domain BD_RS16370 PF00682 HMGL-like BD_RS16375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD_RS16375 PF02785 Biotin carboxylase C-terminal domain BD_RS16375 PF00289 Biotin carboxylase, N-terminal domain BD_RS16380 PF00378 Enoyl-CoA hydratase/isomerase BD_RS16385 PF01039 Carboxyl transferase domain BD_RS16420 PF00005 ABC transporter BD_RS16435 PF00043 Glutathione S-transferase, C-terminal domain BD_RS16435 PF02798 Glutathione S-transferase, N-terminal domain BD_RS16505 PF00561 alpha/beta hydrolase fold BD_RS16520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS16520 PF00072 Response regulator receiver domain BD_RS16520 PF09308 LuxQ, periplasmic BD_RS16520 PF00512 His Kinase A (phospho-acceptor) domain BD_RS16530 PF10672 S-adenosylmethionine-dependent methyltransferase BD_RS16530 PF01170 Putative RNA methylase family UPF0020 BD_RS16535 PF17284 Spermidine synthase tetramerisation domain BD_RS16540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BD_RS16540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BD_RS16565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS16565 PF03466 LysR substrate binding domain BD_RS16570 PF04389 Peptidase family M28 BD_RS16610 PF00011 Hsp20/alpha crystallin family BD_RS16615 PF01272 Transcription elongation factor, GreA/GreB, C-term BD_RS16615 PF03449 Transcription elongation factor, N-terminal BD_RS16645 PF00005 ABC transporter BD_RS16645 PF12848 ABC transporter BD_RS16680 PF03806 AbgT putative transporter family BD_RS16690 PF13426 PAS domain BD_RS16690 PF00512 His Kinase A (phospho-acceptor) domain BD_RS16690 PF00672 HAMP domain BD_RS16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS16695 PF00072 Response regulator receiver domain BD_RS16700 PF00512 His Kinase A (phospho-acceptor) domain BD_RS16700 PF00072 Response regulator receiver domain BD_RS16700 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD_RS16700 PF01627 Hpt domain BD_RS16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS16715 PF07237 Protein of unknown function (DUF1428) BD_RS16730 PF07690 Major Facilitator Superfamily BD_RS16785 PF03372 Endonuclease/Exonuclease/phosphatase family BD_RS16820 PF01965 DJ-1/PfpI family BD_RS16825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS16825 PF00512 His Kinase A (phospho-acceptor) domain BD_RS16825 PF01627 Hpt domain BD_RS16825 PF00989 PAS fold BD_RS16825 PF00072 Response regulator receiver domain BD_RS16825 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD_RS16835 PF04851 Type III restriction enzyme, res subunit BD_RS16835 PF00271 Helicase conserved C-terminal domain BD_RS16840 PF08007 Cupin superfamily protein BD_RS16845 PF01638 HxlR-like helix-turn-helix BD_RS16850 PF02678 Pirin BD_RS16850 PF17954 Quercetinase C-terminal cupin domain BD_RS16855 PF01361 Tautomerase enzyme BD_RS16870 PF03466 LysR substrate binding domain BD_RS16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS16875 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BD_RS16880 PF07690 Major Facilitator Superfamily BD_RS16900 PF18766 SWI2/SNF2 ATPase BD_RS16900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BD_RS16900 PF11867 Domain of unknown function (DUF3387) BD_RS16905 PF01420 Type I restriction modification DNA specificity domain BD_RS16910 PF02384 N-6 DNA Methylase BD_RS16910 PF12161 HsdM N-terminal domain BD_RS16950 PF01636 Phosphotransferase enzyme family BD_RS16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD_RS16980 PF03466 LysR substrate binding domain BD_RS16990 PF02525 Flavodoxin-like fold BD_RS17020 PF00180 Isocitrate/isopropylmalate dehydrogenase BD_RS17055 PF12169 DNA polymerase III subunits gamma and tau domain III BD_RS17060 PF02575 YbaB/EbfC DNA-binding family BD_RS17065 PF13662 Toprim domain BD_RS17065 PF02132 RecR protein BD_RS17070 PF00025 ADP-ribosylation factor family BD_RS17075 PF02445 Quinolinate synthetase A protein BD_RS17125 PF06794 Uncharacterised protein family (UPF0270) BD_RS17145 PF05362 Lon protease (S16) C-terminal proteolytic domain BD_RS17145 PF02190 ATP-dependent protease La (LON) substrate-binding domain BD_RS17145 PF00004 ATPase family associated with various cellular activities (AAA) BD_RS17150 PF02743 Cache domain BD_RS17150 PF00512 His Kinase A (phospho-acceptor) domain BD_RS17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS17155 PF09456 RcsC Alpha-Beta-Loop (ABL) BD_RS17155 PF00512 His Kinase A (phospho-acceptor) domain BD_RS17155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS17155 PF00072 Response regulator receiver domain BD_RS17165 PF07724 AAA domain (Cdc48 subfamily) BD_RS17165 PF10431 C-terminal, D2-small domain, of ClpB protein BD_RS17165 PF06689 ClpX C4-type zinc finger BD_RS17170 PF00574 Clp protease BD_RS17175 PF00883 Cytosol aminopeptidase family, catalytic domain BD_RS17175 PF02789 Cytosol aminopeptidase family, N-terminal domain BD_RS17210 PF02374 Anion-transporting ATPase BD_RS17210 PF17886 HSP20-like domain found in ArsA BD_RS17215 PF02374 Anion-transporting ATPase BD_RS17220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD_RS17220 PF05697 Bacterial trigger factor protein (TF) BD_RS17220 PF05698 Bacterial trigger factor protein (TF) C-terminus BD_RS17225 PF00990 Diguanylate cyclase, GGDEF domain BD_RS17255 PF00483 Nucleotidyl transferase BD_RS17265 PF00271 Helicase conserved C-terminal domain BD_RS17265 PF17764 3′ DNA-binding domain (3′BD) BD_RS17265 PF18074 Primosomal protein N C-terminal domain BD_RS17265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BD_RS17265 PF04851 Type III restriction enzyme, res subunit BD_RS17280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS17280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BD_RS17280 PF00072 Response regulator receiver domain BD_RS17280 PF01627 Hpt domain BD_RS17280 PF00512 His Kinase A (phospho-acceptor) domain BD_RS17280 PF00672 HAMP domain BD_RS17285 PF00318 Ribosomal protein S2 BD_RS17290 PF00889 Elongation factor TS BD_RS17295 PF00696 Amino acid kinase family BD_RS17300 PF01765 Ribosome recycling factor BD_RS17305 PF01255 Putative undecaprenyl diphosphate synthase BD_RS17315 PF02163 Peptidase family M50 BD_RS17315 PF17820 PDZ domain BD_RS17320 PF00814 Glycoprotease family BD_RS17325 PF13614 AAA domain BD_RS17335 PF00849 RNA pseudouridylate synthase BD_RS17335 PF01479 S4 domain BD_RS17340 PF02578 Multi-copper polyphenol oxidoreductase laccase BD_RS17345 PF02245 Methylpurine-DNA glycosylase (MPG) BD_RS17350 PF03006 Haemolysin-III related BD_RS17360 PF01053 Cys/Met metabolism PLP-dependent enzyme BD_RS17365 PF00571 CBS domain BD_RS17365 PF00291 Pyridoxal-phosphate dependent enzyme BD_RS17400 PF02470 MlaD protein BD_RS17405 PF02405 Permease MlaE BD_RS17410 PF02405 Permease MlaE BD_RS17415 PF00005 ABC transporter BD_RS17420 PF00005 ABC transporter BD_RS17425 PF00549 CoA-ligase BD_RS17425 PF08442 ATP-grasp domain BD_RS17430 PF02629 CoA binding domain BD_RS17430 PF00549 CoA-ligase BD_RS17450 PF01738 Dienelactone hydrolase family BD_RS17450 PF00156 Phosphoribosyl transferase domain BD_RS17455 PF00005 ABC transporter BD_RS17510 PF00334 Nucleoside diphosphate kinase BD_RS17515 PF05958 tRNA (Uracil-5-)-methyltransferase BD_RS17525 PF13464 Domain of unknown function (DUF4115) BD_RS17540 PF00111 2Fe-2S iron-sulfur cluster binding domain BD_RS17545 PF02811 PHP domain BD_RS17545 PF00929 Exonuclease BD_RS17545 PF01336 OB-fold nucleic acid binding domain BD_RS17545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD_RS17545 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD_RS17545 PF14579 Helix-hairpin-helix motif BD_RS17545 PF11490 DNA polymerase III polC-type N-terminus II BD_RS17545 PF14480 DNA polymerase III polC-type N-terminus I BD_RS17555 PF02540 NAD synthase BD_RS17555 PF00795 Carbon-nitrogen hydrolase BD_RS17575 PF04055 Radical SAM superfamily BD_RS17575 PF00919 Uncharacterized protein family UPF0004 BD_RS17575 PF18693 TRAM domain BD_RS17595 PF02590 Predicted SPOUT methyltransferase BD_RS17600 PF01467 Cytidylyltransferase-like BD_RS17605 PF01926 50S ribosome-binding GTPase BD_RS17605 PF01018 GTP1/OBG BD_RS17610 PF01016 Ribosomal L27 protein BD_RS17615 PF00829 Ribosomal prokaryotic L21 protein BD_RS17625 PF00575 S1 RNA binding domain BD_RS17625 PF10150 Ribonuclease E/G family BD_RS17630 PF00437 Type II/IV secretion system protein BD_RS17640 PF01791 DeoC/LacD family aldolase BD_RS17645 PF02885 Glycosyl transferase family, helical bundle domain BD_RS17645 PF00591 Glycosyl transferase family, a/b domain BD_RS17645 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BD_RS17650 PF01048 Phosphorylase superfamily BD_RS17655 PF05922 Peptidase inhibitor I9 BD_RS17655 PF00082 Subtilase family BD_RS17660 PF01039 Carboxyl transferase domain BD_RS17665 PF00289 Biotin carboxylase, N-terminal domain BD_RS17665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD_RS17665 PF02785 Biotin carboxylase C-terminal domain BD_RS17670 PF00682 HMGL-like BD_RS17670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD_RS17670 PF00364 Biotin-requiring enzyme BD_RS17670 PF00289 Biotin carboxylase, N-terminal domain BD_RS17670 PF02785 Biotin carboxylase C-terminal domain BD_RS17670 PF02436 Conserved carboxylase domain BD_RS17680 PF00902 Sec-independent protein translocase protein (TatC) BD_RS17685 PF02416 mttA/Hcf106 family BD_RS17700 PF00675 Insulinase (Peptidase family M16) BD_RS17700 PF05193 Peptidase M16 inactive domain BD_RS17705 PF04055 Radical SAM superfamily BD_RS17705 PF06969 HemN C-terminal domain BD_RS17710 PF01025 GrpE BD_RS17715 PF01556 DnaJ C terminal domain BD_RS17715 PF00684 DnaJ central domain BD_RS17715 PF00226 DnaJ domain BD_RS17725 PF01258 Prokaryotic dksA/traR C4-type zinc finger BD_RS17735 PF02190 ATP-dependent protease La (LON) substrate-binding domain BD_RS17735 PF05362 Lon protease (S16) C-terminal proteolytic domain BD_RS17735 PF00004 ATPase family associated with various cellular activities (AAA) BD_RS17775 PF01882 Protein of unknown function DUF58 BD_RS17780 PF07726 ATPase family associated with various cellular activities (AAA) BD_RS17780 PF17863 AAA lid domain BD_RS17785 PF00361 Proton-conducting membrane transporter BD_RS17790 PF00361 Proton-conducting membrane transporter BD_RS17790 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BD_RS17795 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BD_RS17795 PF00361 Proton-conducting membrane transporter BD_RS17800 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BD_RS17805 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BD_RS17810 PF00146 NADH dehydrogenase BD_RS17815 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BD_RS17820 PF03461 TRCF domain BD_RS17820 PF02559 CarD-like/TRCF domain BD_RS17820 PF17757 UvrB interaction domain BD_RS17820 PF00271 Helicase conserved C-terminal domain BD_RS17820 PF00270 DEAD/DEAH box helicase BD_RS17830 PF00933 Glycosyl hydrolase family 3 N terminal domain BD_RS17830 PF01915 Glycosyl hydrolase family 3 C-terminal domain BD_RS17835 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BD_RS17840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD_RS17840 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD_RS17845 PF00231 ATP synthase BD_RS17850 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD_RS17850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD_RS17850 PF00306 ATP synthase alpha/beta chain, C terminal domain BD_RS17855 PF00213 ATP synthase delta (OSCP) subunit BD_RS17860 PF00430 ATP synthase B/B' CF(0) BD_RS17875 PF17762 HTH domain found in ParB protein BD_RS17875 PF02195 ParB-like nuclease domain BD_RS17880 PF13614 AAA domain BD_RS17890 PF02527 rRNA small subunit methyltransferase G BD_RS17895 PF01134 Glucose inhibited division protein A BD_RS17895 PF13932 GidA associated domain BD_RS17900 PF10396 GTP-binding protein TrmE N-terminus BD_RS17900 PF01926 50S ribosome-binding GTPase BD_RS17900 PF12631 MnmE helical domain BD_RS17910 PF14849 YidC periplasmic domain BD_RS17910 PF02096 60Kd inner membrane protein BD_RS17925 PF02203 Tar ligand binding domain homologue BD_RS17925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD_RS17925 PF00672 HAMP domain BD_RS17960 PF03814 Potassium-transporting ATPase A subunit BD_RS17965 PF03814 Potassium-transporting ATPase A subunit BD_RS17970 PF00360 Phytochrome region BD_RS17970 PF08446 PAS fold BD_RS17970 PF00512 His Kinase A (phospho-acceptor) domain BD_RS17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD_RS17970 PF01590 GAF domain BD_RS17995 PF00166 Chaperonin 10 Kd subunit BD_RS18010 PF00825 Ribonuclease P