A11Q_RS00005	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A11Q_RS00010	SM00480	DNA polymerase III beta subunit
A11Q_RS00020	SM00387	Histidine kinase-like ATPases
A11Q_RS00020	SM00433	TopoisomeraseII
A11Q_RS00025	SM00434	DNA Topoisomerase IV
A11Q_RS00030	SM00028	Tetratricopeptide repeats
A11Q_RS00085	SM00893	Electron transfer flavoprotein domain
A11Q_RS00090	SM00893	Electron transfer flavoprotein domain
A11Q_RS00120	SM00347	helix_turn_helix multiple antibiotic resistance protein
A11Q_RS00210	SM00209	Thrombospondin type 1 repeats
A11Q_RS00235	SM00209	Thrombospondin type 1 repeats
A11Q_RS00265	SM00843	A11Q_RS00265
A11Q_RS00290	SM01130	A11Q_RS00290
A11Q_RS00340	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A11Q_RS00340	SM00292	breast cancer carboxy-terminal domain
A11Q_RS00340	SM00532	Ligase N family
A11Q_RS00355	SM00845	GatB domain
A11Q_RS00380	SM00357	Cold shock protein domain
A11Q_RS00380	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS00380	SM00959	Rho termination factor, N-terminal domain
A11Q_RS00410	SM00937	A11Q_RS00410
A11Q_RS00430	SM00028	Tetratricopeptide repeats
A11Q_RS00475	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS00485	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS00620	SM00363	S4 RNA-binding domain
A11Q_RS00635	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A11Q_RS00675	SM00020	Trypsin-like serine protease
A11Q_RS00690	SM00487	DEAD-like helicases superfamily
A11Q_RS00690	SM00490	helicase superfamily c-terminal domain
A11Q_RS00755	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS00760	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS00770	SM00316	Ribosomal protein S1-like RNA-binding domain
A11Q_RS00870	SM00028	Tetratricopeptide repeats
A11Q_RS00870	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS00875	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS00875	SM00464	Found in ATP-dependent protease La (LON)
A11Q_RS00885	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS00885	SM00994	ClpX C4-type zinc finger
A11Q_RS00885	SM01086	C-terminal, D2-small domain, of ClpB protein
A11Q_RS00930	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A11Q_RS00930	SM00245	tail specific protease
A11Q_RS00945	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS00995	SM00493	A11Q_RS00995
A11Q_RS01005	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS01050	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS01065	SM00871	Bacterial transcription activator, effector binding domain
A11Q_RS01110	SM00487	DEAD-like helicases superfamily
A11Q_RS01145	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS01160	SM00342	helix_turn_helix, arabinose operon control protein
A11Q_RS01180	SM01060	A11Q_RS01180
A11Q_RS01235	SM00487	DEAD-like helicases superfamily
A11Q_RS01235	SM00490	helicase superfamily c-terminal domain
A11Q_RS01250	SM00487	DEAD-like helicases superfamily
A11Q_RS01250	SM00490	helicase superfamily c-terminal domain
A11Q_RS01300	SM00867	YceI-like domain 
A11Q_RS01325	SM00849	Metallo-beta-lactamase superfamily
A11Q_RS01330	SM00100	Cyclic nucleotide-monophosphate binding domain
A11Q_RS01330	SM00419	helix_turn_helix, cAMP Regulatory protein
A11Q_RS01370	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A11Q_RS01380	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS01480	SM00116	Domain in cystathionine beta-synthase and other proteins.
A11Q_RS01485	SM00947	Carbonic anhydrase
A11Q_RS01520	SM00448	cheY-homologous receiver domain
A11Q_RS01525	SM00138	Methyltransferase, chemotaxis proteins 
A11Q_RS01530	SM00448	cheY-homologous receiver domain
A11Q_RS01535	SM00448	cheY-homologous receiver domain
A11Q_RS01545	SM00260	Two component signalling adaptor domain
A11Q_RS01550	SM00073	Histidine Phosphotransfer domain
A11Q_RS01550	SM00260	Two component signalling adaptor domain
A11Q_RS01550	SM00387	Histidine kinase-like ATPases
A11Q_RS01550	SM00448	cheY-homologous receiver domain
A11Q_RS01550	SM01231	A11Q_RS01550
A11Q_RS01610	SM00342	helix_turn_helix, arabinose operon control protein
A11Q_RS01610	SM00478	endonuclease III
A11Q_RS01610	SM01009	AlkA N-terminal domain
A11Q_RS01770	SM00155	Phospholipase D. Active site motifs.
A11Q_RS01845	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS01845	SM00448	cheY-homologous receiver domain
A11Q_RS01880	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS01985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A11Q_RS01985	SM00387	Histidine kinase-like ATPases
A11Q_RS02015	SM00028	Tetratricopeptide repeats
A11Q_RS02030	SM00763	PrkA AAA domain
A11Q_RS02050	SM00448	cheY-homologous receiver domain
A11Q_RS02050	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS02075	SM00400	zinc finger
A11Q_RS02075	SM00493	A11Q_RS02075
A11Q_RS02160	SM00267	diguanylate cyclase
A11Q_RS02170	SM00267	diguanylate cyclase
A11Q_RS02210	SM00957	SecA DEAD-like domain
A11Q_RS02210	SM00958	SecA preprotein cross-linking domain
A11Q_RS02290	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS02290	SM00464	Found in ATP-dependent protease La (LON)
A11Q_RS02315	SM00986	Uracil DNA glycosylase superfamily
A11Q_RS02315	SM00987	UreE urease accessory protein, C-terminal domain 
A11Q_RS02325	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS02360	SM01329	A11Q_RS02360
A11Q_RS02420	SM00020	Trypsin-like serine protease
A11Q_RS02435	SM00861	Transketolase, pyrimidine binding domain
A11Q_RS02455	SM00487	DEAD-like helicases superfamily
A11Q_RS02455	SM00490	helicase superfamily c-terminal domain
A11Q_RS02485	SM00478	endonuclease III
A11Q_RS02510	SM00316	Ribosomal protein S1-like RNA-binding domain
A11Q_RS02510	SM00357	Cold shock protein domain
A11Q_RS02510	SM00955	A11Q_RS02510
A11Q_RS02560	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS02575	SM00116	Domain in cystathionine beta-synthase and other proteins.
A11Q_RS02580	SM00245	tail specific protease
A11Q_RS02620	SM01152	A11Q_RS02620
A11Q_RS02655	SM00240	Forkhead associated domain
A11Q_RS02690	SM01321	A11Q_RS02690
A11Q_RS02710	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A11Q_RS02735	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS02750	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A11Q_RS02760	SM00244	prohibitin homologues
A11Q_RS02775	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS02815	SM00858	A11Q_RS02815
A11Q_RS02870	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS02905	SM00849	Metallo-beta-lactamase superfamily
A11Q_RS02930	SM00883	Chaperonin 10 Kd subunit
A11Q_RS02955	SM00363	S4 RNA-binding domain
A11Q_RS02955	SM01390	A11Q_RS02955
A11Q_RS03015	SM00116	Domain in cystathionine beta-synthase and other proteins.
A11Q_RS03065	SM00962	SRP54-type protein, GTPase domain
A11Q_RS03105	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS03105	SM00448	cheY-homologous receiver domain
A11Q_RS03250	SM00448	cheY-homologous receiver domain
A11Q_RS03255	SM00387	Histidine kinase-like ATPases
A11Q_RS03290	SM00387	Histidine kinase-like ATPases
A11Q_RS03290	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS03295	SM00448	cheY-homologous receiver domain
A11Q_RS03295	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS03355	SM00020	Trypsin-like serine protease
A11Q_RS03360	SM00411	bacterial (prokaryotic) histone like domain
A11Q_RS03385	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A11Q_RS03430	SM00240	Forkhead associated domain
A11Q_RS03430	SM00267	diguanylate cyclase
A11Q_RS03470	SM00670	Large family of predicted nucleotide-binding domains
A11Q_RS03500	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS03510	SM00836	DALR anticodon binding domain
A11Q_RS03510	SM01016	Arginyl tRNA synthetase N terminal dom
A11Q_RS03520	SM00448	cheY-homologous receiver domain
A11Q_RS03520	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS03525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A11Q_RS03525	SM00387	Histidine kinase-like ATPases
A11Q_RS03525	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS03565	SM01192	A11Q_RS03565
A11Q_RS03565	SM01193	A11Q_RS03565
A11Q_RS03590	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A11Q_RS03590	SM00475	5'-3' exonuclease
A11Q_RS03590	SM00482	DNA polymerase A domain
A11Q_RS03605	SM00240	Forkhead associated domain
A11Q_RS03605	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS03625	SM00116	Domain in cystathionine beta-synthase and other proteins.
A11Q_RS03650	SM00028	Tetratricopeptide repeats
A11Q_RS03655	SM00028	Tetratricopeptide repeats
A11Q_RS03665	SM00240	Forkhead associated domain
A11Q_RS03690	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS03715	SM00838	Elongation factor G C-terminus
A11Q_RS03740	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A11Q_RS03750	SM00851	MGS-like domain
A11Q_RS03750	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A11Q_RS03755	SM00062	Bacterial periplasmic substrate-binding proteins
A11Q_RS03760	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS03775	SM00842	Cell division protein FtsA
A11Q_RS03795	SM00965	Secretin and TonB N terminus short domain
A11Q_RS03905	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A11Q_RS03930	SM00981	A11Q_RS03930
A11Q_RS03955	SM00316	Ribosomal protein S1-like RNA-binding domain
A11Q_RS03955	SM00732	Likely ribonuclease with RNase H fold.
A11Q_RS03960	SM00855	Phosphoglycerate mutase family
A11Q_RS03975	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A11Q_RS03975	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A11Q_RS03975	SM00493	A11Q_RS03975
A11Q_RS03985	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A11Q_RS03985	SM00245	tail specific protease
A11Q_RS04005	SM00861	Transketolase, pyrimidine binding domain
A11Q_RS04055	SM00838	Elongation factor G C-terminus
A11Q_RS04055	SM00889	Elongation factor G, domain IV
A11Q_RS04060	SM00487	DEAD-like helicases superfamily
A11Q_RS04060	SM00490	helicase superfamily c-terminal domain
A11Q_RS04090	SM00448	cheY-homologous receiver domain
A11Q_RS04090	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS04095	SM00387	Histidine kinase-like ATPases
A11Q_RS04095	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS04115	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04175	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A11Q_RS04215	SM00316	Ribosomal protein S1-like RNA-binding domain
A11Q_RS04230	SM01160	A11Q_RS04230
A11Q_RS04320	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04340	SM00487	DEAD-like helicases superfamily
A11Q_RS04340	SM00490	helicase superfamily c-terminal domain
A11Q_RS04350	SM01007	Class II Aldolase and Adducin N-terminal domain
A11Q_RS04420	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A11Q_RS04450	SM00327	von Willebrand factor (vWF) type A domain
A11Q_RS04455	SM00327	von Willebrand factor (vWF) type A domain
A11Q_RS04460	SM00028	Tetratricopeptide repeats
A11Q_RS04470	SM00257	Lysin motif
A11Q_RS04475	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04500	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
A11Q_RS04525	SM00867	YceI-like domain 
A11Q_RS04550	SM00387	Histidine kinase-like ATPases
A11Q_RS04585	SM00937	A11Q_RS04585
A11Q_RS04595	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04605	SM00935	Outer membrane protein (OmpH-like)
A11Q_RS04645	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04645	SM00448	cheY-homologous receiver domain
A11Q_RS04650	SM00387	Histidine kinase-like ATPases
A11Q_RS04650	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS04650	SM01080	A11Q_RS04650
A11Q_RS04655	SM00904	Riboflavin kinase
A11Q_RS04665	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04685	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04685	SM00448	cheY-homologous receiver domain
A11Q_RS04690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A11Q_RS04690	SM00387	Histidine kinase-like ATPases
A11Q_RS04690	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS04695	SM00448	cheY-homologous receiver domain
A11Q_RS04695	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS04755	SM00116	Domain in cystathionine beta-synthase and other proteins.
A11Q_RS04755	SM00924	MgtE intracellular N domain
A11Q_RS04760	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04765	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04840	SM00841	Elongation factor P, C-terminal
A11Q_RS04840	SM01185	A11Q_RS04840
A11Q_RS04845	SM00028	Tetratricopeptide repeats
A11Q_RS04855	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A11Q_RS04860	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS04870	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A11Q_RS04870	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A11Q_RS04890	SM00257	Lysin motif
A11Q_RS04980	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A11Q_RS04985	SM01150	A11Q_RS04985
A11Q_RS05105	SM00155	Phospholipase D. Active site motifs.
A11Q_RS05115	SM00932	Scaffold protein Nfu/NifU N terminal
A11Q_RS05120	SM01133	A11Q_RS05120
A11Q_RS05140	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A11Q_RS05145	SM00487	DEAD-like helicases superfamily
A11Q_RS05145	SM00490	helicase superfamily c-terminal domain
A11Q_RS05160	SM01058	CarD-like/TRCF domain
A11Q_RS05170	SM00840	A11Q_RS05170
A11Q_RS05195	SM00487	DEAD-like helicases superfamily
A11Q_RS05195	SM00490	helicase superfamily c-terminal domain
A11Q_RS05200	SM00465	GIY-YIG type nucleases (URI domain)
A11Q_RS05235	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS05255	SM00341	Helicase and RNase D C-terminal
A11Q_RS05255	SM00487	DEAD-like helicases superfamily
A11Q_RS05255	SM00490	helicase superfamily c-terminal domain
A11Q_RS05320	SM00316	Ribosomal protein S1-like RNA-binding domain
A11Q_RS05410	SM00421	helix_turn_helix, Lux Regulon
A11Q_RS05425	SM00919	Malic enzyme, NAD binding domain
A11Q_RS05425	SM01274	A11Q_RS05425
A11Q_RS05450	SM00028	Tetratricopeptide repeats
A11Q_RS05465	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
A11Q_RS05465	SM01080	A11Q_RS05465
A11Q_RS05480	SM00563	Phosphate acyltransferases
A11Q_RS05485	SM00287	Bacterial SH3 domain homologues
A11Q_RS05580	SM00052	Putative diguanylate phosphodiesterase
A11Q_RS05580	SM00100	Cyclic nucleotide-monophosphate binding domain
A11Q_RS05680	SM01240	A11Q_RS05680
A11Q_RS05730	SM00360	RNA recognition motif
A11Q_RS05740	SM00360	RNA recognition motif
A11Q_RS05785	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS05830	SM00448	cheY-homologous receiver domain
A11Q_RS05835	SM00100	Cyclic nucleotide-monophosphate binding domain
A11Q_RS06060	SM00448	cheY-homologous receiver domain
A11Q_RS06070	SM00073	Histidine Phosphotransfer domain
A11Q_RS06070	SM00260	Two component signalling adaptor domain
A11Q_RS06070	SM00387	Histidine kinase-like ATPases
A11Q_RS06070	SM01231	A11Q_RS06070
A11Q_RS06075	SM00260	Two component signalling adaptor domain
A11Q_RS06080	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A11Q_RS06085	SM00138	Methyltransferase, chemotaxis proteins 
A11Q_RS06085	SM00448	cheY-homologous receiver domain
A11Q_RS06090	SM00448	cheY-homologous receiver domain
A11Q_RS06095	SM00448	cheY-homologous receiver domain
A11Q_RS06095	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS06100	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A11Q_RS06100	SM00091	PAS domain
A11Q_RS06100	SM00387	Histidine kinase-like ATPases
A11Q_RS06100	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS06110	SM00100	Cyclic nucleotide-monophosphate binding domain
A11Q_RS06135	SM00100	Cyclic nucleotide-monophosphate binding domain
A11Q_RS06135	SM00419	helix_turn_helix, cAMP Regulatory protein
A11Q_RS06190	SM00849	Metallo-beta-lactamase superfamily
A11Q_RS06215	SM00448	cheY-homologous receiver domain
A11Q_RS06275	SM00450	Rhodanese Homology Domain
A11Q_RS06285	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS06295	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS06295	SM00962	SRP54-type protein, GTPase domain
A11Q_RS06295	SM00963	SRP54-type protein, helical bundle domain
A11Q_RS06365	SM00756	A11Q_RS06365
A11Q_RS06375	SM00411	bacterial (prokaryotic) histone like domain
A11Q_RS06395	SM00882	Coenzyme A transferase
A11Q_RS06400	SM00882	Coenzyme A transferase
A11Q_RS06415	SM00867	YceI-like domain 
A11Q_RS06460	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS06475	SM00116	Domain in cystathionine beta-synthase and other proteins.
A11Q_RS06475	SM01240	A11Q_RS06475
A11Q_RS06485	SM00481	DNA polymerase alpha chain like domain
A11Q_RS06575	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A11Q_RS06605	SM00564	beta-propeller repeat
A11Q_RS06615	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A11Q_RS06645	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A11Q_RS06650	SM00822	A11Q_RS06650
A11Q_RS06660	SM00825	Beta-ketoacyl synthase
A11Q_RS06700	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS06750	SM00363	S4 RNA-binding domain
A11Q_RS06795	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A11Q_RS06795	SM00534	ATPase domain of DNA mismatch repair MUTS family
A11Q_RS06820	SM00998	Adenylosuccinate lyase C-terminus
A11Q_RS06840	SM00173	Ras subfamily of RAS small GTPases
A11Q_RS06850	SM00358	Double-stranded RNA binding motif
A11Q_RS06850	SM00535	Ribonuclease III family
A11Q_RS06855	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS06900	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS07005	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A11Q_RS07005	SM01232	A11Q_RS07005
A11Q_RS07025	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS07030	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS07135	SM01323	A11Q_RS07135
A11Q_RS07185	SM00116	Domain in cystathionine beta-synthase and other proteins.
A11Q_RS07205	SM00448	cheY-homologous receiver domain
A11Q_RS07205	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS07215	SM00387	Histidine kinase-like ATPases
A11Q_RS07215	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS07215	SM00448	cheY-homologous receiver domain
A11Q_RS07255	SM00631	A11Q_RS07255
A11Q_RS07310	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS07415	SM00984	UDP binding domain
A11Q_RS07435	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS07445	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS07470	SM00422	helix_turn_helix, mercury resistance
A11Q_RS07475	SM00411	bacterial (prokaryotic) histone like domain
A11Q_RS07480	SM00873	B3/4 domain
A11Q_RS07480	SM00874	tRNA synthetase B5 domain
A11Q_RS07480	SM00896	Ferredoxin-fold anticodon binding domain
A11Q_RS07555	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A11Q_RS07705	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A11Q_RS07705	SM00954	Region found in RelA / SpoT proteins
A11Q_RS07710	SM01409	A11Q_RS07710
A11Q_RS07715	SM00072	Guanylate kinase homologues.
A11Q_RS07730	SM00853	MutL C terminal dimerisation domain
A11Q_RS07730	SM01340	A11Q_RS07730
A11Q_RS07765	SM00316	Ribosomal protein S1-like RNA-binding domain
A11Q_RS07765	SM00322	K homology RNA-binding domain
A11Q_RS07770	SM01387	A11Q_RS07770
A11Q_RS07790	SM00316	Ribosomal protein S1-like RNA-binding domain
A11Q_RS07790	SM00322	K homology RNA-binding domain
A11Q_RS07890	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS07910	SM00487	DEAD-like helicases superfamily
A11Q_RS07910	SM00490	helicase superfamily c-terminal domain
A11Q_RS07920	SM00854	Bacterial capsule synthesis protein PGA_cap
A11Q_RS07930	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS07945	SM00854	Bacterial capsule synthesis protein PGA_cap
A11Q_RS07965	SM00387	Histidine kinase-like ATPases
A11Q_RS07970	SM00421	helix_turn_helix, Lux Regulon
A11Q_RS07970	SM00448	cheY-homologous receiver domain
A11Q_RS08020	SM00226	Low molecular weight phosphatase family
A11Q_RS08075	SM00479	A11Q_RS08075
A11Q_RS08085	SM00996	S-adenosyl-L-homocysteine hydrolase
A11Q_RS08085	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A11Q_RS08095	SM00151	SWI complex, BAF60b domains
A11Q_RS08105	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS08115	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS08210	SM00271	DnaJ molecular chaperone homology domain
A11Q_RS08230	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS08230	SM01086	C-terminal, D2-small domain, of ClpB protein
A11Q_RS08255	SM00463	Small MutS-related domain
A11Q_RS08255	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A11Q_RS08255	SM00534	ATPase domain of DNA mismatch repair MUTS family
A11Q_RS08295	SM01329	A11Q_RS08295
A11Q_RS08385	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS08395	SM00448	cheY-homologous receiver domain
A11Q_RS08395	SM00862	Transcriptional regulatory protein, C terminal
A11Q_RS08400	SM00387	Histidine kinase-like ATPases
A11Q_RS08400	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS08420	SM01004	Delta-aminolevulinic acid dehydratase
A11Q_RS08485	SM00852	Probable molybdopterin binding domain
A11Q_RS08490	SM01230	A11Q_RS08490
A11Q_RS08540	SM00322	K homology RNA-binding domain
A11Q_RS08540	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A11Q_RS08560	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS08560	SM00962	SRP54-type protein, GTPase domain
A11Q_RS08560	SM00963	SRP54-type protein, helical bundle domain
A11Q_RS08565	SM00968	SMC proteins Flexible Hinge Domain
A11Q_RS08590	SM00788	Adenylosuccinate synthetase
A11Q_RS08620	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS08625	SM00746	metallochaperone-like domain
A11Q_RS08630	SM00487	DEAD-like helicases superfamily
A11Q_RS08630	SM00490	helicase superfamily c-terminal domain
A11Q_RS08725	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS08765	SM00855	Phosphoglycerate mutase family
A11Q_RS08945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A11Q_RS08945	SM00387	Histidine kinase-like ATPases
A11Q_RS08945	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS08945	SM00448	cheY-homologous receiver domain
A11Q_RS08960	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS09015	SM00387	Histidine kinase-like ATPases
A11Q_RS09015	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS09020	SM00635	Bacterial Ig-like domain 2
A11Q_RS09045	SM00646	A11Q_RS09045
A11Q_RS09060	SM01400	A11Q_RS09060
A11Q_RS09085	SM00100	Cyclic nucleotide-monophosphate binding domain
A11Q_RS09105	SM00563	Phosphate acyltransferases
A11Q_RS09125	SM00855	Phosphoglycerate mutase family
A11Q_RS09130	SM00861	Transketolase, pyrimidine binding domain
A11Q_RS09185	SM00448	cheY-homologous receiver domain
A11Q_RS09205	SM00871	Bacterial transcription activator, effector binding domain
A11Q_RS09245	SM00507	HNH nucleases
A11Q_RS09275	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS09275	SM00448	cheY-homologous receiver domain
A11Q_RS09285	SM00563	Phosphate acyltransferases
A11Q_RS09290	SM00849	Metallo-beta-lactamase superfamily
A11Q_RS09315	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
A11Q_RS09320	SM00421	helix_turn_helix, Lux Regulon
A11Q_RS09370	SM00342	helix_turn_helix, arabinose operon control protein
A11Q_RS09490	SM00662	RNA polymerases D
A11Q_RS09495	SM00363	S4 RNA-binding domain
A11Q_RS09495	SM01390	A11Q_RS09495
A11Q_RS09560	SM01374	A11Q_RS09560
A11Q_RS09580	SM00322	K homology RNA-binding domain
A11Q_RS09595	SM01382	A11Q_RS09595
A11Q_RS09595	SM01383	A11Q_RS09595
A11Q_RS09615	SM01403	A11Q_RS09615
A11Q_RS09620	SM00838	Elongation factor G C-terminus
A11Q_RS09620	SM00889	Elongation factor G, domain IV
A11Q_RS09635	SM00663	RNA polymerase I subunit A N-terminus
A11Q_RS09660	SM00649	Ribosomal protein L11/L12
A11Q_RS09665	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A11Q_RS09665	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A11Q_RS09715	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A11Q_RS09720	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A11Q_RS09730	SM00448	cheY-homologous receiver domain
A11Q_RS09735	SM00091	PAS domain
A11Q_RS09735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A11Q_RS09735	SM00387	Histidine kinase-like ATPases
A11Q_RS09735	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS09750	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS09750	SM01086	C-terminal, D2-small domain, of ClpB protein
A11Q_RS09770	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS09810	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A11Q_RS09810	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A11Q_RS09815	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A11Q_RS09860	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS09880	SM00487	DEAD-like helicases superfamily
A11Q_RS09880	SM00490	helicase superfamily c-terminal domain
A11Q_RS09945	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS09955	SM01005	Alanine racemase, C-terminal domain
A11Q_RS09960	SM00267	diguanylate cyclase
A11Q_RS10060	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A11Q_RS10115	SM00864	Tubulin/FtsZ family, GTPase domain
A11Q_RS10115	SM00865	Tubulin/FtsZ family, C-terminal domain
A11Q_RS10120	SM00842	Cell division protein FtsA
A11Q_RS10195	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10270	SM00631	A11Q_RS10270
A11Q_RS10295	SM00479	A11Q_RS10295
A11Q_RS10320	SM00363	S4 RNA-binding domain
A11Q_RS10405	SM00650	Ribosomal RNA adenine dimethylases
A11Q_RS10465	SM00448	cheY-homologous receiver domain
A11Q_RS10470	SM00387	Histidine kinase-like ATPases
A11Q_RS10470	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS10475	SM00028	Tetratricopeptide repeats
A11Q_RS10545	SM00478	endonuclease III
A11Q_RS10545	SM00525	A11Q_RS10545
A11Q_RS10590	SM00769	Water Stress and Hypersensitive response
A11Q_RS10600	SM00331	Sigma factor PP2C-like phosphatases
A11Q_RS10635	SM00387	Histidine kinase-like ATPases
A11Q_RS10645	SM00387	Histidine kinase-like ATPases
A11Q_RS10645	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS10645	SM01080	A11Q_RS10645
A11Q_RS10650	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10650	SM00448	cheY-homologous receiver domain
A11Q_RS10690	SM00411	bacterial (prokaryotic) histone like domain
A11Q_RS10715	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10720	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10750	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10795	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10850	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10900	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS10905	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10905	SM00448	cheY-homologous receiver domain
A11Q_RS10955	SM00563	Phosphate acyltransferases
A11Q_RS10970	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS10980	SM00360	RNA recognition motif
A11Q_RS10995	SM00507	HNH nucleases
A11Q_RS11030	SM00028	Tetratricopeptide repeats
A11Q_RS11075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A11Q_RS11140	SM00331	Sigma factor PP2C-like phosphatases
A11Q_RS11140	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A11Q_RS11170	SM00822	A11Q_RS11170
A11Q_RS11185	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS11190	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS11200	SM00448	cheY-homologous receiver domain
A11Q_RS11220	SM00267	diguanylate cyclase
A11Q_RS11220	SM00448	cheY-homologous receiver domain
A11Q_RS11300	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A11Q_RS11300	SM00245	tail specific protease
A11Q_RS11355	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS11360	SM00450	Rhodanese Homology Domain
A11Q_RS11435	SM00878	Biotin carboxylase C-terminal domain
A11Q_RS11515	SM00020	Trypsin-like serine protease
A11Q_RS11575	SM01011	Aminopeptidase P, N-terminal domain
A11Q_RS11635	SM00932	Scaffold protein Nfu/NifU N terminal
A11Q_RS11650	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS11725	SM00014	Acid phosphatase homologues
A11Q_RS11745	SM00838	Elongation factor G C-terminus
A11Q_RS11895	SM00028	Tetratricopeptide repeats
A11Q_RS11930	SM00858	A11Q_RS11930
A11Q_RS11940	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS11970	SM00448	cheY-homologous receiver domain
A11Q_RS11985	SM00883	Chaperonin 10 Kd subunit
A11Q_RS12000	SM00020	Trypsin-like serine protease
A11Q_RS12120	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS12145	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS12180	SM00507	HNH nucleases
A11Q_RS12195	SM00829	Enoylreductase
A11Q_RS12210	SM00507	HNH nucleases
A11Q_RS12235	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS12270	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS12300	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS12310	SM00448	cheY-homologous receiver domain
A11Q_RS12330	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS12400	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS12475	SM01321	A11Q_RS12475
A11Q_RS12550	SM00344	helix_turn_helix ASNC type
A11Q_RS12650	SM00881	CoA binding domain
A11Q_RS12655	SM00562	A11Q_RS12655
A11Q_RS12665	SM00028	Tetratricopeptide repeats
A11Q_RS12690	SM00479	A11Q_RS12690
A11Q_RS12715	SM00028	Tetratricopeptide repeats
A11Q_RS12720	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS12860	SM00316	Ribosomal protein S1-like RNA-binding domain
A11Q_RS12865	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS12870	SM01133	A11Q_RS12870
A11Q_RS12875	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A11Q_RS12900	SM00878	Biotin carboxylase C-terminal domain
A11Q_RS12950	SM00729	Elongator protein 3, MiaB family, Radical SAM
A11Q_RS12960	SM00271	DnaJ molecular chaperone homology domain
A11Q_RS12980	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS12980	SM00464	Found in ATP-dependent protease La (LON)
A11Q_RS13095	SM00487	DEAD-like helicases superfamily
A11Q_RS13095	SM00490	helicase superfamily c-terminal domain
A11Q_RS13095	SM00982	A11Q_RS13095
A11Q_RS13095	SM01058	CarD-like/TRCF domain
A11Q_RS13115	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS13150	SM00470	ParB-like nuclease domain
A11Q_RS13170	SM01228	A11Q_RS13170
A11Q_RS13180	SM00393	Putative single-stranded nucleic acids-binding domain
A11Q_RS13200	SM00042	Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein.
A11Q_RS13250	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A11Q_RS13250	SM00091	PAS domain
A11Q_RS13250	SM00387	Histidine kinase-like ATPases
A11Q_RS13250	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS13250	SM00448	cheY-homologous receiver domain
A11Q_RS13255	SM00450	Rhodanese Homology Domain
A11Q_RS13270	SM00871	Bacterial transcription activator, effector binding domain
A11Q_RS13280	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A11Q_RS13280	SM00091	PAS domain
A11Q_RS13280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A11Q_RS13330	SM00240	Forkhead associated domain
A11Q_RS13340	SM00563	Phosphate acyltransferases
A11Q_RS13370	SM00091	PAS domain
A11Q_RS13370	SM00387	Histidine kinase-like ATPases
A11Q_RS13370	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS13405	SM00905	Dihydroneopterin aldolase
A11Q_RS13415	SM00387	Histidine kinase-like ATPases
A11Q_RS13415	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS13450	SM00487	DEAD-like helicases superfamily
A11Q_RS13450	SM00490	helicase superfamily c-terminal domain
A11Q_RS13480	SM00749	bacterial OsmY and nodulation domain
A11Q_RS13490	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS13495	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A11Q_RS13500	SM00014	Acid phosphatase homologues
A11Q_RS13540	SM00387	Histidine kinase-like ATPases
A11Q_RS13540	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS13565	SM00014	Acid phosphatase homologues
A11Q_RS13610	SM00382	ATPases associated with a variety of cellular activities
A11Q_RS13625	SM00530	Helix-turn-helix XRE-family like proteins 
A11Q_RS13650	SM00387	Histidine kinase-like ATPases
A11Q_RS13650	SM00388	His Kinase A (phosphoacceptor) domain
A11Q_RS13650	SM00448	cheY-homologous receiver domain
