locus-tag class description DOE51_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DOE51_RS00005 PF00308 Bacterial dnaA protein DOE51_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DOE51_RS00010 PF02767 DNA polymerase III beta subunit, central domain DOE51_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DOE51_RS00015 PF02463 RecF/RecN/SMC N terminal domain DOE51_RS00020 PF00204 DNA gyrase B DOE51_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus DOE51_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS00020 PF18053 DNA gyrase B subunit insert domain DOE51_RS00020 PF01751 Toprim domain DOE51_RS00025 PF00521 DNA gyrase/topoisomerase IV, subunit A DOE51_RS00025 PF03989 DNA gyrase C-terminal domain, beta-propeller DOE51_RS00045 PF00119 ATP synthase A chain DOE51_RS00050 PF00137 ATP synthase subunit C DOE51_RS00060 PF02875 Mur ligase family, glutamate ligase domain DOE51_RS00060 PF08245 Mur ligase middle domain DOE51_RS00065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DOE51_RS00065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DOE51_RS00065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DOE51_RS00065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DOE51_RS00070 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DOE51_RS00075 PF00639 PPIC-type PPIASE domain DOE51_RS00075 PF09312 SurA N-terminal domain DOE51_RS00080 PF00639 PPIC-type PPIASE domain DOE51_RS00080 PF09312 SurA N-terminal domain DOE51_RS00085 PF00639 PPIC-type PPIASE domain DOE51_RS00095 PF00766 Electron transfer flavoprotein FAD-binding domain DOE51_RS00095 PF01012 Electron transfer flavoprotein domain DOE51_RS00100 PF01012 Electron transfer flavoprotein domain DOE51_RS00110 PF00890 FAD binding domain DOE51_RS00110 PF02910 Fumarate reductase flavoprotein C-term DOE51_RS00145 PF00082 Subtilase family DOE51_RS00170 PF01250 Ribosomal protein S6 DOE51_RS00180 PF03948 Ribosomal protein L9, C-terminal domain DOE51_RS00180 PF01281 Ribosomal protein L9, N-terminal domain DOE51_RS00195 PF00106 short chain dehydrogenase DOE51_RS00195 PF00300 Histidine phosphatase superfamily (branch 1) DOE51_RS00200 PF00772 DnaB-like helicase N terminal domain DOE51_RS00200 PF03796 DnaB-like helicase C terminal domain DOE51_RS00205 PF00158 Sigma-54 interaction domain DOE51_RS00205 PF02954 Bacterial regulatory protein, Fis family DOE51_RS00205 PF00072 Response regulator receiver domain DOE51_RS00210 PF04055 Radical SAM superfamily DOE51_RS00215 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DOE51_RS00215 PF17854 FtsK alpha domain DOE51_RS00215 PF09397 Ftsk gamma domain DOE51_RS00215 PF01580 FtsK/SpoIIIE family DOE51_RS00235 PF01678 Diaminopimelate epimerase DOE51_RS00240 PF00701 Dihydrodipicolinate synthetase family DOE51_RS00245 PF05173 Dihydrodipicolinate reductase, C-terminus DOE51_RS00245 PF01113 Dihydrodipicolinate reductase, N-terminus DOE51_RS00255 PF00923 Transaldolase/Fructose-6-phosphate aldolase DOE51_RS00270 PF02875 Mur ligase family, glutamate ligase domain DOE51_RS00270 PF08245 Mur ligase middle domain DOE51_RS00285 PF12826 Helix-hairpin-helix motif DOE51_RS00285 PF03120 NAD-dependent DNA ligase OB-fold domain DOE51_RS00285 PF01653 NAD-dependent DNA ligase adenylation domain DOE51_RS00285 PF00533 BRCA1 C Terminus (BRCT) domain DOE51_RS00285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DOE51_RS00290 PF02686 Glu-tRNAGln amidotransferase C subunit DOE51_RS00295 PF01425 Amidase DOE51_RS00300 PF02934 GatB/GatE catalytic domain DOE51_RS00300 PF02637 GatB domain DOE51_RS00305 PF02541 Ppx/GppA phosphatase family DOE51_RS00305 PF01761 3-dehydroquinate synthase DOE51_RS00325 PF07497 Rho termination factor, RNA-binding domain DOE51_RS00325 PF07498 Rho termination factor, N-terminal domain DOE51_RS00325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOE51_RS00340 PF01197 Ribosomal protein L31 DOE51_RS00345 PF03462 PCRF domain DOE51_RS00345 PF00472 RF-1 domain DOE51_RS00350 PF05175 Methyltransferase small domain DOE51_RS00350 PF17827 PrmC N-terminal domain DOE51_RS00355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DOE51_RS00375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOE51_RS00375 PF02403 Seryl-tRNA synthetase N-terminal domain DOE51_RS00400 PF09335 SNARE associated Golgi protein DOE51_RS00410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DOE51_RS00420 PF14489 QueF-like protein DOE51_RS00425 PF00311 Phosphoenolpyruvate carboxylase DOE51_RS00430 PF01274 Malate synthase DOE51_RS00435 PF00463 Isocitrate lyase family DOE51_RS00460 PF00561 alpha/beta hydrolase fold DOE51_RS00460 PF08386 TAP-like protein DOE51_RS00500 PF00166 Chaperonin 10 Kd subunit DOE51_RS00505 PF00118 TCP-1/cpn60 chaperonin family DOE51_RS00525 PF00072 Response regulator receiver domain DOE51_RS00560 PF00437 Type II/IV secretion system protein DOE51_RS00565 PF00263 Bacterial type II and III secretion system protein DOE51_RS00565 PF03958 Bacterial type II/III secretion system short domain DOE51_RS00605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS00605 PF02203 Tar ligand binding domain homologue DOE51_RS00605 PF00672 HAMP domain DOE51_RS00610 PF00156 Phosphoribosyl transferase domain DOE51_RS00620 PF13525 Outer membrane lipoprotein DOE51_RS00640 PF00202 Aminotransferase class-III DOE51_RS00645 PF07687 Peptidase dimerisation domain DOE51_RS00645 PF01546 Peptidase family M20/M25/M40 DOE51_RS00650 PF04958 Arginine N-succinyltransferase beta subunit DOE51_RS00655 PF00171 Aldehyde dehydrogenase family DOE51_RS00660 PF02618 YceG-like family DOE51_RS00670 PF01842 ACT domain DOE51_RS00670 PF00696 Amino acid kinase family DOE51_RS00685 PF01207 Dihydrouridine synthase (Dus) DOE51_RS00690 PF00009 Elongation factor Tu GTP binding domain DOE51_RS00690 PF03144 Elongation factor Tu domain 2 DOE51_RS00690 PF14492 Elongation Factor G, domain II DOE51_RS00690 PF00679 Elongation factor G C-terminus DOE51_RS00695 PF00005 ABC transporter DOE51_RS00705 PF00912 Transglycosylase DOE51_RS00710 PF01370 NAD dependent epimerase/dehydratase family DOE51_RS00715 PF01569 PAP2 superfamily DOE51_RS00720 PF01618 MotA/TolQ/ExbB proton channel family DOE51_RS00725 PF13677 Membrane MotB of proton-channel complex MotA/MotB DOE51_RS00725 PF00691 OmpA family DOE51_RS00760 PF00085 Thioredoxin DOE51_RS00770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DOE51_RS00775 PF08335 GlnD PII-uridylyltransferase DOE51_RS00775 PF03710 Glutamate-ammonia ligase adenylyltransferase DOE51_RS00780 PF04052 TolB amino-terminal domain DOE51_RS00780 PF07676 WD40-like Beta Propeller Repeat DOE51_RS00790 PF02472 Biopolymer transport protein ExbD/TolR DOE51_RS00795 PF01618 MotA/TolQ/ExbB proton channel family DOE51_RS00815 PF01458 Uncharacterized protein family (UPF0051) DOE51_RS00820 PF00005 ABC transporter DOE51_RS00825 PF01458 Uncharacterized protein family (UPF0051) DOE51_RS00830 PF00266 Aminotransferase class-V DOE51_RS00835 PF01106 NifU-like domain DOE51_RS00855 PF13742 OB-fold nucleic acid binding domain DOE51_RS00855 PF02601 Exonuclease VII, large subunit DOE51_RS00860 PF02609 Exonuclease VII small subunit DOE51_RS00865 PF00348 Polyprenyl synthetase DOE51_RS00870 PF01479 S4 domain DOE51_RS00870 PF01728 FtsJ-like methyltransferase DOE51_RS00880 PF05195 Aminopeptidase P, N-terminal domain DOE51_RS00880 PF00557 Metallopeptidase family M24 DOE51_RS00895 PF01266 FAD dependent oxidoreductase DOE51_RS00895 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DOE51_RS00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS00925 PF08447 PAS fold DOE51_RS00925 PF08448 PAS fold DOE51_RS00960 PF04002 RadC-like JAB domain DOE51_RS00975 PF07879 PHB/PHA accumulation regulator DNA-binding domain DOE51_RS00975 PF05233 PHB accumulation regulatory domain DOE51_RS01005 PF06798 PrkA serine protein kinase C-terminal domain DOE51_RS01005 PF08298 PrkA AAA domain DOE51_RS01010 PF04285 Protein of unknown function (DUF444) DOE51_RS01015 PF04293 SpoVR like protein DOE51_RS01020 PF01253 Translation initiation factor SUI1 DOE51_RS01025 PF00072 Response regulator receiver domain DOE51_RS01025 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS01035 PF14437 MafB19-like deaminase DOE51_RS01040 PF01165 Ribosomal protein S21 DOE51_RS01045 PF09424 Yqey-like protein DOE51_RS01050 PF01807 CHC2 zinc finger DOE51_RS01050 PF08275 DNA primase catalytic core, N-terminal domain DOE51_RS01050 PF13662 Toprim domain DOE51_RS01050 PF00772 DnaB-like helicase N terminal domain DOE51_RS01055 PF04545 Sigma-70, region 4 DOE51_RS01055 PF03979 Sigma-70 factor, region 1.1 DOE51_RS01055 PF04539 Sigma-70 region 3 DOE51_RS01055 PF04542 Sigma-70 region 2 DOE51_RS01055 PF04546 Sigma-70, non-essential region DOE51_RS01055 PF00140 Sigma-70 factor, region 1.2 DOE51_RS01070 PF02627 Carboxymuconolactone decarboxylase family DOE51_RS01075 PF02082 Transcriptional regulator DOE51_RS01080 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DOE51_RS01085 PF01176 Translation initiation factor 1A / IF-1 DOE51_RS01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS01115 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS01115 PF01627 Hpt domain DOE51_RS01115 PF00072 Response regulator receiver domain DOE51_RS01135 PF05532 CsbD-like DOE51_RS01140 PF07043 Protein of unknown function (DUF1328) DOE51_RS01145 PF00158 Sigma-54 interaction domain DOE51_RS01145 PF00072 Response regulator receiver domain DOE51_RS01145 PF02954 Bacterial regulatory protein, Fis family DOE51_RS01150 PF00210 Ferritin-like domain DOE51_RS01160 PF03631 Virulence factor BrkB DOE51_RS01170 PF00107 Zinc-binding dehydrogenase DOE51_RS01170 PF08240 Alcohol dehydrogenase GroES-like domain DOE51_RS01190 PF01597 Glycine cleavage H-protein DOE51_RS01195 PF03951 Glutamine synthetase, beta-Grasp domain DOE51_RS01195 PF00120 Glutamine synthetase, catalytic domain DOE51_RS01200 PF00543 Nitrogen regulatory protein P-II DOE51_RS01210 PF00588 SpoU rRNA Methylase family DOE51_RS01215 PF01043 SecA preprotein cross-linking domain DOE51_RS01215 PF07516 SecA Wing and Scaffold domain DOE51_RS01215 PF07517 SecA DEAD-like domain DOE51_RS01240 PF00501 AMP-binding enzyme DOE51_RS01240 PF13193 AMP-binding enzyme C-terminal domain DOE51_RS01245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOE51_RS01245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DOE51_RS01260 PF00561 alpha/beta hydrolase fold DOE51_RS01275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DOE51_RS01275 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DOE51_RS01280 PF00115 Cytochrome C and Quinol oxidase polypeptide I DOE51_RS01285 PF00510 Cytochrome c oxidase subunit III DOE51_RS01295 PF01040 UbiA prenyltransferase family DOE51_RS01300 PF13417 Glutathione S-transferase, N-terminal domain DOE51_RS01320 PF00080 Copper/zinc superoxide dismutase (SODC) DOE51_RS01325 PF00210 Ferritin-like domain DOE51_RS01335 PF00912 Transglycosylase DOE51_RS01335 PF00905 Penicillin binding protein transpeptidase domain DOE51_RS01345 PF02954 Bacterial regulatory protein, Fis family DOE51_RS01345 PF00072 Response regulator receiver domain DOE51_RS01345 PF00158 Sigma-54 interaction domain DOE51_RS01350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOE51_RS01350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS01350 PF00072 Response regulator receiver domain DOE51_RS01350 PF00672 HAMP domain DOE51_RS01350 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS01350 PF01627 Hpt domain DOE51_RS01370 PF04209 homogentisate 1,2-dioxygenase DOE51_RS01390 PF13618 Gluconate 2-dehydrogenase subunit 3 DOE51_RS01395 PF05199 GMC oxidoreductase DOE51_RS01395 PF00732 GMC oxidoreductase DOE51_RS01400 PF00034 Cytochrome c DOE51_RS01405 PF00210 Ferritin-like domain DOE51_RS01410 PF07690 Major Facilitator Superfamily DOE51_RS01430 PF05195 Aminopeptidase P, N-terminal domain DOE51_RS01430 PF00557 Metallopeptidase family M24 DOE51_RS01455 PF02527 rRNA small subunit methyltransferase G DOE51_RS01460 PF07690 Major Facilitator Superfamily DOE51_RS01475 PF00270 DEAD/DEAH box helicase DOE51_RS01475 PF00271 Helicase conserved C-terminal domain DOE51_RS01480 PF00152 tRNA synthetases class II (D, K and N) DOE51_RS01480 PF01336 OB-fold nucleic acid binding domain DOE51_RS01485 PF12833 Helix-turn-helix domain DOE51_RS01485 PF06719 AraC-type transcriptional regulator N-terminus DOE51_RS01490 PF00171 Aldehyde dehydrogenase family DOE51_RS01525 PF00899 ThiF family DOE51_RS01535 PF00072 Response regulator receiver domain DOE51_RS01535 PF09308 LuxQ, periplasmic DOE51_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS01535 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS01540 PF00271 Helicase conserved C-terminal domain DOE51_RS01540 PF00270 DEAD/DEAH box helicase DOE51_RS01545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOE51_RS01565 PF00561 alpha/beta hydrolase fold DOE51_RS01575 PF00326 Prolyl oligopeptidase family DOE51_RS01590 PF00561 alpha/beta hydrolase fold DOE51_RS01600 PF00106 short chain dehydrogenase DOE51_RS01615 PF00248 Aldo/keto reductase family DOE51_RS01620 PF12833 Helix-turn-helix domain DOE51_RS01620 PF06719 AraC-type transcriptional regulator N-terminus DOE51_RS01645 PF07690 Major Facilitator Superfamily DOE51_RS01685 PF13361 UvrD-like helicase C-terminal domain DOE51_RS01685 PF00580 UvrD/REP helicase N-terminal domain DOE51_RS01750 PF00092 von Willebrand factor type A domain DOE51_RS01790 PF00195 Chalcone and stilbene synthases, N-terminal domain DOE51_RS01790 PF02797 Chalcone and stilbene synthases, C-terminal domain DOE51_RS01795 PF07690 Major Facilitator Superfamily DOE51_RS01815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOE51_RS01820 PF04461 Protein of unknown function (DUF520) DOE51_RS01825 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DOE51_RS01830 PF13472 GDSL-like Lipase/Acylhydrolase family DOE51_RS01835 PF00005 ABC transporter DOE51_RS01845 PF03481 Putative GTP-binding controlling metal-binding DOE51_RS01845 PF01300 Telomere recombination DOE51_RS01865 PF00817 impB/mucB/samB family DOE51_RS01865 PF11798 IMS family HHH motif DOE51_RS01875 PF03960 ArsC family DOE51_RS01880 PF00491 Arginase family DOE51_RS01885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOE51_RS01890 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS01895 PF12911 N-terminal TM domain of oligopeptide transport permease C DOE51_RS01895 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS01900 PF02203 Tar ligand binding domain homologue DOE51_RS01900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS01900 PF00672 HAMP domain DOE51_RS01910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DOE51_RS01910 PF17944 Arginine decarboxylase C-terminal helical extension DOE51_RS01910 PF17810 Arginine decarboxylase helical bundle domain DOE51_RS01915 PF13603 Leucyl-tRNA synthetase, Domain 2 DOE51_RS01915 PF08264 Anticodon-binding domain of tRNA DOE51_RS01915 PF00133 tRNA synthetases class I (I, L, M and V) DOE51_RS01915 PF09334 tRNA synthetases class I (M) DOE51_RS01920 PF00990 Diguanylate cyclase, GGDEF domain DOE51_RS01920 PF00072 Response regulator receiver domain DOE51_RS01925 PF16916 Dimerisation domain of Zinc Transporter DOE51_RS01925 PF01545 Cation efflux family DOE51_RS01930 PF02390 Putative methyltransferase DOE51_RS01940 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS01945 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS01945 PF00072 Response regulator receiver domain DOE51_RS01970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DOE51_RS01970 PF00005 ABC transporter DOE51_RS01975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DOE51_RS01975 PF00005 ABC transporter DOE51_RS01980 PF13419 Haloacid dehalogenase-like hydrolase DOE51_RS01985 PF01389 OmpA-like transmembrane domain DOE51_RS01985 PF00691 OmpA family DOE51_RS01995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOE51_RS01995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE51_RS02000 PF00672 HAMP domain DOE51_RS02000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS02000 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS02000 PF13426 PAS domain DOE51_RS02005 PF12900 Pyridoxamine 5'-phosphate oxidase DOE51_RS02010 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DOE51_RS02010 PF00391 PEP-utilising enzyme, mobile domain DOE51_RS02010 PF02896 PEP-utilising enzyme, TIM barrel domain DOE51_RS02015 PF00011 Hsp20/alpha crystallin family DOE51_RS02020 PF00753 Metallo-beta-lactamase superfamily DOE51_RS02020 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DOE51_RS02020 PF10996 Beta-Casp domain DOE51_RS02035 PF00294 pfkB family carbohydrate kinase DOE51_RS02040 PF00571 CBS domain DOE51_RS02060 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOE51_RS02060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOE51_RS02060 PF14579 Helix-hairpin-helix motif DOE51_RS02060 PF02811 PHP domain DOE51_RS02100 PF17831 Pyruvate dehydrogenase E1 component middle domain DOE51_RS02100 PF00456 Transketolase, thiamine diphosphate binding domain DOE51_RS02150 PF01551 Peptidase family M23 DOE51_RS02150 PF08525 Opacity-associated protein A N-terminal motif DOE51_RS02150 PF01476 LysM domain DOE51_RS02170 PF00108 Thiolase, N-terminal domain DOE51_RS02170 PF02803 Thiolase, C-terminal domain DOE51_RS02185 PF01966 HD domain DOE51_RS02200 PF00700 Bacterial flagellin C-terminal helical region DOE51_RS02200 PF00669 Bacterial flagellin N-terminal helical region DOE51_RS02205 PF00700 Bacterial flagellin C-terminal helical region DOE51_RS02205 PF00669 Bacterial flagellin N-terminal helical region DOE51_RS02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS02220 PF03466 LysR substrate binding domain DOE51_RS02225 PF03109 ABC1 family DOE51_RS02230 PF00773 RNB domain DOE51_RS02230 PF08461 Ribonuclease R winged-helix domain DOE51_RS02230 PF17876 Cold shock domain DOE51_RS02230 PF00575 S1 RNA binding domain DOE51_RS02230 PF08206 Ribonuclease B OB domain DOE51_RS02300 PF02653 Branched-chain amino acid transport system / permease component DOE51_RS02305 PF02653 Branched-chain amino acid transport system / permease component DOE51_RS02310 PF00005 ABC transporter DOE51_RS02315 PF02608 ABC transporter substrate-binding protein PnrA-like DOE51_RS02320 PF00027 Cyclic nucleotide-binding domain DOE51_RS02320 PF13545 Crp-like helix-turn-helix domain DOE51_RS02335 PF01980 tRNA-methyltransferase O DOE51_RS02335 PF18389 TrmO C-terminal domain DOE51_RS02365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS02365 PF03466 LysR substrate binding domain DOE51_RS02375 PF10458 Valyl tRNA synthetase tRNA binding arm DOE51_RS02375 PF00133 tRNA synthetases class I (I, L, M and V) DOE51_RS02375 PF08264 Anticodon-binding domain of tRNA DOE51_RS02390 PF07690 Major Facilitator Superfamily DOE51_RS02400 PF02594 Uncharacterised ACR, YggU family COG1872 DOE51_RS02410 PF03807 NADP oxidoreductase coenzyme F420-dependent DOE51_RS02410 PF14748 Pyrroline-5-carboxylate reductase dimerisation DOE51_RS02415 PF01168 Alanine racemase, N-terminal domain DOE51_RS02430 PF02545 Maf-like protein DOE51_RS02455 PF00498 FHA domain DOE51_RS02480 PF01618 MotA/TolQ/ExbB proton channel family DOE51_RS02485 PF02472 Biopolymer transport protein ExbD/TolR DOE51_RS02510 PF01066 CDP-alcohol phosphatidyltransferase DOE51_RS02515 PF01118 Semialdehyde dehydrogenase, NAD binding domain DOE51_RS02515 PF02774 Semialdehyde dehydrogenase, dimerisation domain DOE51_RS02530 PF01416 tRNA pseudouridine synthase DOE51_RS02535 PF00572 Ribosomal protein L13 DOE51_RS02540 PF00380 Ribosomal protein S9/S16 DOE51_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS02550 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS02550 PF09308 LuxQ, periplasmic DOE51_RS02550 PF00072 Response regulator receiver domain DOE51_RS02560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DOE51_RS02560 PF02272 DHHA1 domain DOE51_RS02560 PF01411 tRNA synthetases class II (A) DOE51_RS02565 PF02631 RecX family DOE51_RS02570 PF00149 Calcineurin-like phosphoesterase DOE51_RS02575 PF00501 AMP-binding enzyme DOE51_RS02575 PF13193 AMP-binding enzyme C-terminal domain DOE51_RS02595 PF04608 Phosphatidylglycerophosphatase A DOE51_RS02600 PF02464 Competence-damaged protein DOE51_RS02600 PF18146 Damage-inducible protein CinA KH domain DOE51_RS02600 PF00994 Probable molybdopterin binding domain DOE51_RS02605 PF00154 recA bacterial DNA recombination protein DOE51_RS02635 PF00255 Glutathione peroxidase DOE51_RS02660 PF00696 Amino acid kinase family DOE51_RS02660 PF01842 ACT domain DOE51_RS02660 PF13840 ACT domain DOE51_RS02670 PF00460 Flagella basal body rod protein DOE51_RS02670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOE51_RS02675 PF00460 Flagella basal body rod protein DOE51_RS02675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOE51_RS02690 PF02119 Flagellar P-ring protein DOE51_RS02715 PF00460 Flagella basal body rod protein DOE51_RS02715 PF07559 Flagellar basal body protein FlaE DOE51_RS02715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOE51_RS02720 PF00669 Bacterial flagellin N-terminal helical region DOE51_RS02725 PF02599 Global regulator protein family DOE51_RS02730 PF02623 FliW protein DOE51_RS02740 PF02646 RmuC family DOE51_RS02745 PF01040 UbiA prenyltransferase family DOE51_RS02755 PF13193 AMP-binding enzyme C-terminal domain DOE51_RS02755 PF00501 AMP-binding enzyme DOE51_RS02770 PF00939 Sodium:sulfate symporter transmembrane region DOE51_RS02785 PF00348 Polyprenyl synthetase DOE51_RS02795 PF04445 Putative SAM-dependent methyltransferase DOE51_RS02830 PF00285 Citrate synthase, C-terminal domain DOE51_RS02845 PF01230 HIT domain DOE51_RS02875 PF02895 Signal transducing histidine kinase, homodimeric domain DOE51_RS02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS02875 PF01627 Hpt domain DOE51_RS02875 PF07194 P2 response regulator binding domain DOE51_RS02875 PF01584 CheW-like domain DOE51_RS02880 PF01584 CheW-like domain DOE51_RS02885 PF01339 CheB methylesterase DOE51_RS02885 PF00072 Response regulator receiver domain DOE51_RS02890 PF00171 Aldehyde dehydrogenase family DOE51_RS02910 PF07478 D-ala D-ala ligase C-terminus DOE51_RS02910 PF01820 D-ala D-ala ligase N-terminus DOE51_RS02935 PF00730 HhH-GPD superfamily base excision DNA repair protein DOE51_RS02935 PF00633 Helix-hairpin-helix motif DOE51_RS02955 PF12857 TOBE-like domain DOE51_RS02955 PF17850 CysA C-terminal regulatory domain DOE51_RS02955 PF00005 ABC transporter DOE51_RS02960 PF00672 HAMP domain DOE51_RS02960 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS02960 PF01627 Hpt domain DOE51_RS02960 PF00072 Response regulator receiver domain DOE51_RS02960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOE51_RS02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS02965 PF00072 Response regulator receiver domain DOE51_RS02965 PF09308 LuxQ, periplasmic DOE51_RS02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS02965 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS02980 PF00700 Bacterial flagellin C-terminal helical region DOE51_RS02980 PF00669 Bacterial flagellin N-terminal helical region DOE51_RS02990 PF00700 Bacterial flagellin C-terminal helical region DOE51_RS02990 PF00669 Bacterial flagellin N-terminal helical region DOE51_RS02995 PF01965 DJ-1/PfpI family DOE51_RS03000 PF00355 Rieske [2Fe-2S] domain DOE51_RS03010 PF07195 Flagellar hook-associated protein 2 C-terminus DOE51_RS03010 PF02465 Flagellar hook-associated protein 2 N-terminus DOE51_RS03010 PF07196 Flagellin hook IN motif DOE51_RS03015 PF02561 Flagellar protein FliS DOE51_RS03040 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DOE51_RS03050 PF13188 PAS domain DOE51_RS03050 PF08448 PAS fold DOE51_RS03050 PF00072 Response regulator receiver domain DOE51_RS03050 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS03055 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS03055 PF00072 Response regulator receiver domain DOE51_RS03065 PF01467 Cytidylyltransferase-like DOE51_RS03070 PF00155 Aminotransferase class I and II DOE51_RS03080 PF00248 Aldo/keto reductase family DOE51_RS03100 PF00089 Trypsin DOE51_RS03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS03105 PF08446 PAS fold DOE51_RS03105 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS03105 PF00360 Phytochrome region DOE51_RS03105 PF01590 GAF domain DOE51_RS03110 PF00857 Isochorismatase family DOE51_RS03120 PF03466 LysR substrate binding domain DOE51_RS03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS03135 PF00691 OmpA family DOE51_RS03150 PF00814 Glycoprotease family DOE51_RS03155 PF00398 Ribosomal RNA adenine dimethylase DOE51_RS03160 PF01668 SmpB protein DOE51_RS03185 PF07317 Flagellar regulator YcgR DOE51_RS03185 PF07238 PilZ domain DOE51_RS03190 PF18125 RlmM ferredoxin-like domain DOE51_RS03190 PF01728 FtsJ-like methyltransferase DOE51_RS03205 PF01047 MarR family DOE51_RS03215 PF13533 Biotin-lipoyl like DOE51_RS03220 PF07690 Major Facilitator Superfamily DOE51_RS03230 PF00557 Metallopeptidase family M24 DOE51_RS03240 PF03853 YjeF-related protein N-terminus DOE51_RS03240 PF01256 Carbohydrate kinase DOE51_RS03260 PF03006 Haemolysin-III related DOE51_RS03265 PF07690 Major Facilitator Superfamily DOE51_RS03275 PF16360 GTP-binding GTPase Middle Region DOE51_RS03275 PF13167 GTP-binding GTPase N-terminal DOE51_RS03275 PF01926 50S ribosome-binding GTPase DOE51_RS03280 PF00270 DEAD/DEAH box helicase DOE51_RS03280 PF00271 Helicase conserved C-terminal domain DOE51_RS03285 PF03641 Possible lysine decarboxylase DOE51_RS03295 PF09587 Bacterial capsule synthesis protein PGA_cap DOE51_RS03335 PF00296 Luciferase-like monooxygenase DOE51_RS03355 PF00561 alpha/beta hydrolase fold DOE51_RS03360 PF07859 alpha/beta hydrolase fold DOE51_RS03415 PF01597 Glycine cleavage H-protein DOE51_RS03420 PF08669 Glycine cleavage T-protein C-terminal barrel domain DOE51_RS03420 PF01571 Aminomethyltransferase folate-binding domain DOE51_RS03455 PF02347 Glycine cleavage system P-protein DOE51_RS03485 PF01523 Putative modulator of DNA gyrase DOE51_RS03500 PF01336 OB-fold nucleic acid binding domain DOE51_RS03500 PF00152 tRNA synthetases class II (D, K and N) DOE51_RS03520 PF00216 Bacterial DNA-binding protein DOE51_RS03535 PF00293 NUDIX domain DOE51_RS03540 PF01180 Dihydroorotate dehydrogenase DOE51_RS03545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DOE51_RS03545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DOE51_RS03560 PF00294 pfkB family carbohydrate kinase DOE51_RS03560 PF01467 Cytidylyltransferase-like DOE51_RS03575 PF04055 Radical SAM superfamily DOE51_RS03590 PF02566 OsmC-like protein DOE51_RS03595 PF01047 MarR family DOE51_RS03610 PF00342 Phosphoglucose isomerase DOE51_RS03615 PF00480 ROK family DOE51_RS03620 PF00686 Starch binding domain DOE51_RS03620 PF02806 Alpha amylase, C-terminal all-beta domain DOE51_RS03620 PF00128 Alpha amylase, catalytic domain DOE51_RS03625 PF17912 MalK OB fold domain DOE51_RS03625 PF00005 ABC transporter DOE51_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS03640 PF17967 Pullulanase N2 domain DOE51_RS03640 PF03714 Bacterial pullanase-associated domain DOE51_RS03640 PF11852 Domain of unknown function (DUF3372) DOE51_RS03640 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DOE51_RS03640 PF18494 Pullulanase Ins domain DOE51_RS03650 PF00990 Diguanylate cyclase, GGDEF domain DOE51_RS03685 PF08281 Sigma-70, region 4 DOE51_RS03685 PF04542 Sigma-70 region 2 DOE51_RS03700 PF07690 Major Facilitator Superfamily DOE51_RS03715 PF01641 SelR domain DOE51_RS03730 PF02562 PhoH-like protein DOE51_RS03730 PF13638 PIN domain DOE51_RS03735 PF01575 MaoC like domain DOE51_RS03760 PF02803 Thiolase, C-terminal domain DOE51_RS03760 PF00108 Thiolase, N-terminal domain DOE51_RS03770 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS03770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE51_RS03775 PF00364 Biotin-requiring enzyme DOE51_RS03775 PF02817 e3 binding domain DOE51_RS03775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DOE51_RS03780 PF03749 Sugar fermentation stimulation protein RE domain DOE51_RS03780 PF17746 SfsA N-terminal OB domain DOE51_RS03805 PF13462 Thioredoxin DOE51_RS03805 PF06965 Na+/H+ antiporter 1 DOE51_RS03825 PF00437 Type II/IV secretion system protein DOE51_RS03835 PF03952 Enolase, N-terminal domain DOE51_RS03835 PF00113 Enolase, C-terminal TIM barrel domain DOE51_RS03850 PF01367 5'-3' exonuclease, C-terminal SAM fold DOE51_RS03850 PF00476 DNA polymerase family A DOE51_RS03850 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DOE51_RS03855 PF01209 ubiE/COQ5 methyltransferase family DOE51_RS03870 PF00158 Sigma-54 interaction domain DOE51_RS03870 PF00072 Response regulator receiver domain DOE51_RS03870 PF02954 Bacterial regulatory protein, Fis family DOE51_RS03875 PF01926 50S ribosome-binding GTPase DOE51_RS03880 PF02348 Cytidylyltransferase DOE51_RS03885 PF06418 CTP synthase N-terminus DOE51_RS03885 PF00117 Glutamine amidotransferase class-I DOE51_RS03890 PF01380 SIS domain DOE51_RS03890 PF00571 CBS domain DOE51_RS03925 PF01470 Pyroglutamyl peptidase DOE51_RS03990 PF02472 Biopolymer transport protein ExbD/TolR DOE51_RS04005 PF12399 Branched-chain amino acid ATP-binding cassette transporter DOE51_RS04005 PF00005 ABC transporter DOE51_RS04010 PF00309 Sigma-54 factor, Activator interacting domain (AID) DOE51_RS04010 PF04963 Sigma-54 factor, core binding domain DOE51_RS04010 PF04552 Sigma-54, DNA binding domain DOE51_RS04015 PF00156 Phosphoribosyl transferase domain DOE51_RS04035 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DOE51_RS04035 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DOE51_RS04045 PF02773 S-adenosylmethionine synthetase, C-terminal domain DOE51_RS04045 PF00438 S-adenosylmethionine synthetase, N-terminal domain DOE51_RS04045 PF02772 S-adenosylmethionine synthetase, central domain DOE51_RS04050 PF00679 Elongation factor G C-terminus DOE51_RS04050 PF00009 Elongation factor Tu GTP binding domain DOE51_RS04050 PF03144 Elongation factor Tu domain 2 DOE51_RS04050 PF06421 GTP-binding protein LepA C-terminus DOE51_RS04055 PF10502 Signal peptidase, peptidase S26 DOE51_RS04060 PF10502 Signal peptidase, peptidase S26 DOE51_RS04080 PF10502 Signal peptidase, peptidase S26 DOE51_RS04085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DOE51_RS04085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DOE51_RS04090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DOE51_RS04090 PF00117 Glutamine amidotransferase class-I DOE51_RS04100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOE51_RS04100 PF02142 MGS-like domain DOE51_RS04100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DOE51_RS04110 PF00005 ABC transporter DOE51_RS04120 PF06750 Bacterial Peptidase A24 N-terminal domain DOE51_RS04120 PF01478 Type IV leader peptidase family DOE51_RS04125 PF02491 SHS2 domain inserted in FTSA DOE51_RS04125 PF11983 Membrane-attachment and polymerisation-promoting switch DOE51_RS04145 PF00263 Bacterial type II and III secretion system protein DOE51_RS04145 PF03958 Bacterial type II/III secretion system short domain DOE51_RS04145 PF07660 Secretin and TonB N terminus short domain DOE51_RS04145 PF11741 AMIN domain DOE51_RS04160 PF00004 ATPase family associated with various cellular activities (AAA) DOE51_RS04160 PF16193 AAA C-terminal domain DOE51_RS04160 PF12002 MgsA AAA+ ATPase C terminal DOE51_RS04230 PF07690 Major Facilitator Superfamily DOE51_RS04240 PF12833 Helix-turn-helix domain DOE51_RS04240 PF02805 Metal binding domain of Ada DOE51_RS04240 PF06029 AlkA N-terminal domain DOE51_RS04240 PF00730 HhH-GPD superfamily base excision DNA repair protein DOE51_RS04245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DOE51_RS04245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DOE51_RS04255 PF00672 HAMP domain DOE51_RS04255 PF00072 Response regulator receiver domain DOE51_RS04255 PF01627 Hpt domain DOE51_RS04255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOE51_RS04255 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS04260 PF00072 Response regulator receiver domain DOE51_RS04260 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS04265 PF07969 Amidohydrolase family DOE51_RS04290 PF13302 Acetyltransferase (GNAT) domain DOE51_RS04300 PF17763 Glutaminase/Asparaginase C-terminal domain DOE51_RS04300 PF00710 Asparaginase, N-terminal DOE51_RS04305 PF02321 Outer membrane efflux protein DOE51_RS04310 PF00873 AcrB/AcrD/AcrF family DOE51_RS04315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DOE51_RS04320 PF00155 Aminotransferase class I and II DOE51_RS04325 PF06826 Predicted Permease Membrane Region DOE51_RS04340 PF01594 AI-2E family transporter DOE51_RS04425 PF01084 Ribosomal protein S18 DOE51_RS04430 PF00830 Ribosomal L28 family DOE51_RS04445 PF00795 Carbon-nitrogen hydrolase DOE51_RS04460 PF01170 Putative RNA methylase family UPF0020 DOE51_RS04460 PF02926 THUMP domain DOE51_RS04490 PF00132 Bacterial transferase hexapeptide (six repeats) DOE51_RS04490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DOE51_RS04500 PF01176 Translation initiation factor 1A / IF-1 DOE51_RS04505 PF17674 HHH domain DOE51_RS04505 PF16921 Tex protein YqgF-like domain DOE51_RS04505 PF09371 Tex-like protein N-terminal domain DOE51_RS04505 PF00575 S1 RNA binding domain DOE51_RS04510 PF01053 Cys/Met metabolism PLP-dependent enzyme DOE51_RS04525 PF01523 Putative modulator of DNA gyrase DOE51_RS04530 PF01523 Putative modulator of DNA gyrase DOE51_RS04535 PF02667 Short chain fatty acid transporter DOE51_RS04540 PF00578 AhpC/TSA family DOE51_RS04550 PF01131 DNA topoisomerase DOE51_RS04550 PF01751 Toprim domain DOE51_RS04550 PF13368 Topoisomerase C-terminal repeat DOE51_RS04565 PF00595 PDZ domain DOE51_RS04565 PF03572 Peptidase family S41 DOE51_RS04565 PF11818 C-terminal domain of tail specific protease (DUF3340) DOE51_RS04565 PF17804 Tail specific protease N-terminal domain DOE51_RS04585 PF02780 Transketolase, C-terminal domain DOE51_RS04585 PF02779 Transketolase, pyrimidine binding domain DOE51_RS04600 PF00156 Phosphoribosyl transferase domain DOE51_RS04605 PF03091 CutA1 divalent ion tolerance protein DOE51_RS04610 PF00571 CBS domain DOE51_RS04610 PF01595 Cyclin M transmembrane N-terminal domain DOE51_RS04635 PF00679 Elongation factor G C-terminus DOE51_RS04635 PF03144 Elongation factor Tu domain 2 DOE51_RS04635 PF14492 Elongation Factor G, domain II DOE51_RS04635 PF03764 Elongation factor G, domain IV DOE51_RS04635 PF00009 Elongation factor Tu GTP binding domain DOE51_RS04640 PF00270 DEAD/DEAH box helicase DOE51_RS04640 PF09382 RQC domain DOE51_RS04640 PF16124 RecQ zinc-binding DOE51_RS04640 PF00570 HRDC domain DOE51_RS04640 PF00271 Helicase conserved C-terminal domain DOE51_RS04650 PF07995 Glucose / Sorbosone dehydrogenase DOE51_RS04655 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DOE51_RS04670 PF01522 Polysaccharide deacetylase DOE51_RS04670 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DOE51_RS04675 PF12848 ABC transporter DOE51_RS04675 PF00005 ABC transporter DOE51_RS04675 PF16326 ABC transporter C-terminal domain DOE51_RS04695 PF00873 AcrB/AcrD/AcrF family DOE51_RS04700 PF02769 AIR synthase related protein, C-terminal domain DOE51_RS04700 PF00586 AIR synthase related protein, N-terminal domain DOE51_RS04705 PF00581 Rhodanese-like domain DOE51_RS04725 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DOE51_RS04730 PF04264 YceI-like domain DOE51_RS04735 PF03466 LysR substrate binding domain DOE51_RS04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS04745 PF00437 Type II/IV secretion system protein DOE51_RS04750 PF02769 AIR synthase related protein, C-terminal domain DOE51_RS04750 PF00586 AIR synthase related protein, N-terminal domain DOE51_RS04755 PF13090 Polyphosphate kinase C-terminal domain 2 DOE51_RS04755 PF17941 Polyphosphate kinase C-terminal domain 1 DOE51_RS04755 PF13089 Polyphosphate kinase N-terminal domain DOE51_RS04755 PF02503 Polyphosphate kinase middle domain DOE51_RS04765 PF02541 Ppx/GppA phosphatase family DOE51_RS04775 PF01895 PhoU domain DOE51_RS04780 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS04780 PF00072 Response regulator receiver domain DOE51_RS04785 PF00989 PAS fold DOE51_RS04785 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS04785 PF16736 Single Cache-like DOE51_RS04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS04800 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DOE51_RS04800 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DOE51_RS04800 PF01189 16S rRNA methyltransferase RsmB/F DOE51_RS04815 PF00005 ABC transporter DOE51_RS04860 PF01544 CorA-like Mg2+ transporter protein DOE51_RS04900 PF02223 Thymidylate kinase DOE51_RS04905 PF09115 DNA polymerase III, delta subunit, C terminal DOE51_RS04910 PF01026 TatD related DNase DOE51_RS04920 PF03006 Haemolysin-III related DOE51_RS04945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DOE51_RS04945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DOE51_RS04950 PF00162 Phosphoglycerate kinase DOE51_RS04955 PF00121 Triosephosphate isomerase DOE51_RS04975 PF00291 Pyridoxal-phosphate dependent enzyme DOE51_RS04975 PF13291 ACT domain DOE51_RS04990 PF01625 Peptide methionine sulfoxide reductase DOE51_RS05005 PF00155 Aminotransferase class I and II DOE51_RS05010 PF02224 Cytidylate kinase DOE51_RS05030 PF00575 S1 RNA binding domain DOE51_RS05035 PF01343 Peptidase family S49 DOE51_RS05045 PF01230 HIT domain DOE51_RS05065 PF01565 FAD binding domain DOE51_RS05065 PF08031 Berberine and berberine like DOE51_RS05075 PF08450 SMP-30/Gluconolactonase/LRE-like region DOE51_RS05085 PF03748 Flagellar basal body-associated protein FliL DOE51_RS05090 PF00675 Insulinase (Peptidase family M16) DOE51_RS05090 PF05193 Peptidase M16 inactive domain DOE51_RS05105 PF03466 LysR substrate binding domain DOE51_RS05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS05110 PF02203 Tar ligand binding domain homologue DOE51_RS05110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS05110 PF00672 HAMP domain DOE51_RS05130 PF03618 Kinase/pyrophosphorylase DOE51_RS05145 PF01029 NusB family DOE51_RS05150 PF03477 ATP cone domain DOE51_RS05160 PF01029 NusB family DOE51_RS05160 PF01189 16S rRNA methyltransferase RsmB/F DOE51_RS05185 PF01790 Prolipoprotein diacylglyceryl transferase DOE51_RS05195 PF13393 Histidyl-tRNA synthetase DOE51_RS05195 PF03129 Anticodon binding domain DOE51_RS05210 PF00005 ABC transporter DOE51_RS05220 PF12849 PBP superfamily domain DOE51_RS05225 PF00043 Glutathione S-transferase, C-terminal domain DOE51_RS05225 PF13417 Glutathione S-transferase, N-terminal domain DOE51_RS05230 PF00211 Adenylate and Guanylate cyclase catalytic domain DOE51_RS05245 PF01272 Transcription elongation factor, GreA/GreB, C-term DOE51_RS05245 PF03449 Transcription elongation factor, N-terminal DOE51_RS05275 PF00877 NlpC/P60 family DOE51_RS05275 PF01476 LysM domain DOE51_RS05285 PF03006 Haemolysin-III related DOE51_RS05290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS05290 PF02743 Cache domain DOE51_RS05290 PF00672 HAMP domain DOE51_RS05295 PF02203 Tar ligand binding domain homologue DOE51_RS05295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS05295 PF00672 HAMP domain DOE51_RS05300 PF10609 NUBPL iron-transfer P-loop NTPase DOE51_RS05330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOE51_RS05330 PF03129 Anticodon binding domain DOE51_RS05340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS05340 PF02203 Tar ligand binding domain homologue DOE51_RS05340 PF00672 HAMP domain DOE51_RS05350 PF00391 PEP-utilising enzyme, mobile domain DOE51_RS05350 PF02896 PEP-utilising enzyme, TIM barrel domain DOE51_RS05350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DOE51_RS05370 PF06470 SMC proteins Flexible Hinge Domain DOE51_RS05370 PF02463 RecF/RecN/SMC N terminal domain DOE51_RS05380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DOE51_RS05385 PF01047 MarR family DOE51_RS05400 PF00881 Nitroreductase family DOE51_RS05405 PF02082 Transcriptional regulator DOE51_RS05435 PF02881 SRP54-type protein, helical bundle domain DOE51_RS05435 PF00448 SRP54-type protein, GTPase domain DOE51_RS05440 PF13460 NAD(P)H-binding DOE51_RS05465 PF05164 Cell division protein ZapA DOE51_RS05470 PF01812 5-formyltetrahydrofolate cyclo-ligase family DOE51_RS05475 PF01966 HD domain DOE51_RS05475 PF00013 KH domain DOE51_RS05475 PF12072 Domain of unknown function (DUF3552) DOE51_RS05480 PF00579 tRNA synthetases class I (W and Y) DOE51_RS05480 PF01479 S4 domain DOE51_RS05490 PF00561 alpha/beta hydrolase fold DOE51_RS05495 PF01521 Iron-sulphur cluster biosynthesis DOE51_RS05500 PF00266 Aminotransferase class-V DOE51_RS05510 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DOE51_RS05510 PF02867 Ribonucleotide reductase, barrel domain DOE51_RS05515 PF00575 S1 RNA binding domain DOE51_RS05520 PF02464 Competence-damaged protein DOE51_RS05520 PF00994 Probable molybdopterin binding domain DOE51_RS05520 PF18146 Damage-inducible protein CinA KH domain DOE51_RS05525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOE51_RS05525 PF02770 Acyl-CoA dehydrogenase, middle domain DOE51_RS05525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DOE51_RS05530 PF00588 SpoU rRNA Methylase family DOE51_RS05545 PF00672 HAMP domain DOE51_RS05545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS05545 PF02203 Tar ligand binding domain homologue DOE51_RS05550 PF10672 S-adenosylmethionine-dependent methyltransferase DOE51_RS05550 PF02926 THUMP domain DOE51_RS05550 PF01170 Putative RNA methylase family UPF0020 DOE51_RS05555 PF04011 LemA family DOE51_RS05635 PF02678 Pirin DOE51_RS05635 PF05726 Pirin C-terminal cupin domain DOE51_RS05640 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DOE51_RS05640 PF01048 Phosphorylase superfamily DOE51_RS05655 PF01177 Asp/Glu/Hydantoin racemase DOE51_RS05660 PF02954 Bacterial regulatory protein, Fis family DOE51_RS05660 PF01590 GAF domain DOE51_RS05705 PF00171 Aldehyde dehydrogenase family DOE51_RS05710 PF01557 Fumarylacetoacetate (FAA) hydrolase family DOE51_RS05720 PF01430 Hsp33 protein DOE51_RS05725 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS05725 PF13493 Domain of unknown function (DUF4118) DOE51_RS05725 PF02702 Osmosensitive K+ channel His kinase sensor domain DOE51_RS05740 PF18324 Hypothetical protein TT1725 DOE51_RS05740 PF00180 Isocitrate/isopropylmalate dehydrogenase DOE51_RS05790 PF00072 Response regulator receiver domain DOE51_RS05790 PF01627 Hpt domain DOE51_RS05790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOE51_RS05790 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS05790 PF00672 HAMP domain DOE51_RS05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS05800 PF01713 Smr domain DOE51_RS05800 PF00488 MutS domain V DOE51_RS05805 PF00795 Carbon-nitrogen hydrolase DOE51_RS05815 PF00082 Subtilase family DOE51_RS05830 PF01435 Peptidase family M48 DOE51_RS05835 PF00004 ATPase family associated with various cellular activities (AAA) DOE51_RS05835 PF17871 AAA lid domain DOE51_RS05835 PF10431 C-terminal, D2-small domain, of ClpB protein DOE51_RS05835 PF02861 Clp amino terminal domain, pathogenicity island component DOE51_RS05835 PF07724 AAA domain (Cdc48 subfamily) DOE51_RS05840 PF02617 ATP-dependent Clp protease adaptor protein ClpS DOE51_RS05845 PF14245 Type IV pilin PilA DOE51_RS05845 PF07963 Prokaryotic N-terminal methylation motif DOE51_RS05855 PF00684 DnaJ central domain DOE51_RS05855 PF00226 DnaJ domain DOE51_RS05855 PF01556 DnaJ C terminal domain DOE51_RS05860 PF00012 Hsp70 protein DOE51_RS05865 PF13193 AMP-binding enzyme C-terminal domain DOE51_RS05865 PF00501 AMP-binding enzyme DOE51_RS05865 PF16177 Acetyl-coenzyme A synthetase N-terminus DOE51_RS05875 PF01207 Dihydrouridine synthase (Dus) DOE51_RS05890 PF00326 Prolyl oligopeptidase family DOE51_RS05890 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DOE51_RS05905 PF02321 Outer membrane efflux protein DOE51_RS05915 PF12704 MacB-like periplasmic core domain DOE51_RS05915 PF00005 ABC transporter DOE51_RS05915 PF02687 FtsX-like permease family DOE51_RS05920 PF01207 Dihydrouridine synthase (Dus) DOE51_RS05930 PF02810 SEC-C motif DOE51_RS05935 PF00106 short chain dehydrogenase DOE51_RS05940 PF10415 Fumarase C C-terminus DOE51_RS05940 PF00206 Lyase DOE51_RS05955 PF00580 UvrD/REP helicase N-terminal domain DOE51_RS05955 PF13361 UvrD-like helicase C-terminal domain DOE51_RS05975 PF00155 Aminotransferase class I and II DOE51_RS05975 PF00392 Bacterial regulatory proteins, gntR family DOE51_RS05985 PF04287 tRNA pseudouridine synthase C DOE51_RS05985 PF00849 RNA pseudouridylate synthase DOE51_RS06005 PF01722 BolA-like protein DOE51_RS06015 PF00005 ABC transporter DOE51_RS06015 PF12848 ABC transporter DOE51_RS06020 PF00672 HAMP domain DOE51_RS06020 PF18698 Histidine kinase sensor domain DOE51_RS06020 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS06035 PF00557 Metallopeptidase family M24 DOE51_RS06040 PF05221 S-adenosyl-L-homocysteine hydrolase DOE51_RS06040 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DOE51_RS06055 PF00929 Exonuclease DOE51_RS06060 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS06060 PF00072 Response regulator receiver domain DOE51_RS06105 PF02899 Phage integrase, N-terminal SAM-like domain DOE51_RS06105 PF00589 Phage integrase family DOE51_RS06165 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DOE51_RS06165 PF04101 Glycosyltransferase family 28 C-terminal domain DOE51_RS06175 PF00270 DEAD/DEAH box helicase DOE51_RS06175 PF16124 RecQ zinc-binding DOE51_RS06175 PF09382 RQC domain DOE51_RS06175 PF00271 Helicase conserved C-terminal domain DOE51_RS06175 PF00570 HRDC domain DOE51_RS06185 PF00072 Response regulator receiver domain DOE51_RS06185 PF00158 Sigma-54 interaction domain DOE51_RS06185 PF02954 Bacterial regulatory protein, Fis family DOE51_RS06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS06195 PF08447 PAS fold DOE51_RS06195 PF08448 PAS fold DOE51_RS06205 PF00158 Sigma-54 interaction domain DOE51_RS06205 PF00072 Response regulator receiver domain DOE51_RS06205 PF02954 Bacterial regulatory protein, Fis family DOE51_RS06215 PF13614 AAA domain DOE51_RS06230 PF03442 Carbohydrate binding domain X2 DOE51_RS06230 PF00942 Cellulose binding domain DOE51_RS06240 PF01757 Acyltransferase family DOE51_RS06305 PF03976 Polyphosphate kinase 2 (PPK2) DOE51_RS06390 PF12419 SNF2 Helicase protein DOE51_RS06390 PF00271 Helicase conserved C-terminal domain DOE51_RS06390 PF00176 SNF2 family N-terminal domain DOE51_RS06395 PF00271 Helicase conserved C-terminal domain DOE51_RS06395 PF00270 DEAD/DEAH box helicase DOE51_RS06395 PF03880 DbpA RNA binding domain DOE51_RS06450 PF12848 ABC transporter DOE51_RS06450 PF00005 ABC transporter DOE51_RS06470 PF00271 Helicase conserved C-terminal domain DOE51_RS06470 PF08494 DEAD/H associated DOE51_RS06470 PF00270 DEAD/DEAH box helicase DOE51_RS06475 PF01068 ATP dependent DNA ligase domain DOE51_RS06475 PF04679 ATP dependent DNA ligase C terminal region DOE51_RS06475 PF04675 DNA ligase N terminus DOE51_RS06495 PF01593 Flavin containing amine oxidoreductase DOE51_RS06500 PF02566 OsmC-like protein DOE51_RS06520 PF00669 Bacterial flagellin N-terminal helical region DOE51_RS06520 PF00700 Bacterial flagellin C-terminal helical region DOE51_RS06525 PF00107 Zinc-binding dehydrogenase DOE51_RS06525 PF08240 Alcohol dehydrogenase GroES-like domain DOE51_RS06545 PF00271 Helicase conserved C-terminal domain DOE51_RS06545 PF00270 DEAD/DEAH box helicase DOE51_RS06550 PF12848 ABC transporter DOE51_RS06550 PF00005 ABC transporter DOE51_RS06550 PF16326 ABC transporter C-terminal domain DOE51_RS06565 PF13416 Bacterial extracellular solute-binding protein DOE51_RS06570 PF08402 TOBE domain DOE51_RS06570 PF00005 ABC transporter DOE51_RS06575 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS06580 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS06585 PF11700 Vacuole effluxer Atg22 like DOE51_RS06595 PF01728 FtsJ-like methyltransferase DOE51_RS06600 PF00849 RNA pseudouridylate synthase DOE51_RS06600 PF04287 tRNA pseudouridine synthase C DOE51_RS06605 PF01047 MarR family DOE51_RS06610 PF01966 HD domain DOE51_RS06630 PF00082 Subtilase family DOE51_RS06635 PF00072 Response regulator receiver domain DOE51_RS06635 PF00990 Diguanylate cyclase, GGDEF domain DOE51_RS06640 PF14759 Reductase C-terminal DOE51_RS06640 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS06650 PF03976 Polyphosphate kinase 2 (PPK2) DOE51_RS06660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DOE51_RS06660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DOE51_RS06665 PF02566 OsmC-like protein DOE51_RS06670 PF01063 Amino-transferase class IV DOE51_RS06685 PF05922 Peptidase inhibitor I9 DOE51_RS06685 PF00082 Subtilase family DOE51_RS06685 PF02225 PA domain DOE51_RS06685 PF13860 FlgD Ig-like domain DOE51_RS06730 PF13192 Thioredoxin domain DOE51_RS06730 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS06735 PF03466 LysR substrate binding domain DOE51_RS06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS06745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DOE51_RS06755 PF00709 Adenylosuccinate synthetase DOE51_RS06760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOE51_RS06760 PF01842 ACT domain DOE51_RS06760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE51_RS06765 PF00266 Aminotransferase class-V DOE51_RS06775 PF06144 DNA polymerase III, delta subunit DOE51_RS06790 PF03023 Lipid II flippase MurJ DOE51_RS06795 PF02203 Tar ligand binding domain homologue DOE51_RS06795 PF00672 HAMP domain DOE51_RS06795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS06800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS06800 PF02203 Tar ligand binding domain homologue DOE51_RS06800 PF00672 HAMP domain DOE51_RS06805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS06805 PF02203 Tar ligand binding domain homologue DOE51_RS06805 PF00672 HAMP domain DOE51_RS06810 PF00672 HAMP domain DOE51_RS06810 PF02203 Tar ligand binding domain homologue DOE51_RS06810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS06855 PF01618 MotA/TolQ/ExbB proton channel family DOE51_RS06870 PF03819 MazG nucleotide pyrophosphohydrolase domain DOE51_RS06875 PF01966 HD domain DOE51_RS06875 PF07698 7TM receptor with intracellular HD hydrolase DOE51_RS06875 PF07697 7TM-HD extracellular DOE51_RS06880 PF02130 Uncharacterized protein family UPF0054 DOE51_RS06890 PF00005 ABC transporter DOE51_RS06890 PF12704 MacB-like periplasmic core domain DOE51_RS06890 PF02687 FtsX-like permease family DOE51_RS06895 PF00005 ABC transporter DOE51_RS06900 PF01103 Surface antigen DOE51_RS06900 PF07244 Surface antigen variable number repeat DOE51_RS06910 PF03938 Outer membrane protein (OmpH-like) DOE51_RS06915 PF00132 Bacterial transferase hexapeptide (six repeats) DOE51_RS06915 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DOE51_RS06920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DOE51_RS06920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DOE51_RS06925 PF02684 Lipid-A-disaccharide synthetase DOE51_RS06930 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DOE51_RS06935 PF03279 Bacterial lipid A biosynthesis acyltransferase DOE51_RS06960 PF02954 Bacterial regulatory protein, Fis family DOE51_RS06960 PF00072 Response regulator receiver domain DOE51_RS06960 PF00158 Sigma-54 interaction domain DOE51_RS06965 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS06970 PF06574 FAD synthetase DOE51_RS06970 PF01687 Riboflavin kinase DOE51_RS06980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DOE51_RS06980 PF00437 Type II/IV secretion system protein DOE51_RS06990 PF00482 Type II secretion system (T2SS), protein F DOE51_RS06995 PF00989 PAS fold DOE51_RS06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS06995 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS07000 PF00072 Response regulator receiver domain DOE51_RS07000 PF02954 Bacterial regulatory protein, Fis family DOE51_RS07000 PF00158 Sigma-54 interaction domain DOE51_RS07070 PF01618 MotA/TolQ/ExbB proton channel family DOE51_RS07085 PF02580 D-Tyr-tRNA(Tyr) deacylase DOE51_RS07090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS07090 PF02203 Tar ligand binding domain homologue DOE51_RS07090 PF00672 HAMP domain DOE51_RS07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS07100 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS07100 PF01627 Hpt domain DOE51_RS07100 PF00072 Response regulator receiver domain DOE51_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS07150 PF00849 RNA pseudouridylate synthase DOE51_RS07170 PF10437 Bacterial lipoate protein ligase C-terminus DOE51_RS07170 PF03099 Biotin/lipoate A/B protein ligase family DOE51_RS07185 PF12848 ABC transporter DOE51_RS07185 PF16326 ABC transporter C-terminal domain DOE51_RS07185 PF00005 ABC transporter DOE51_RS07190 PF08274 PhnA Zinc-Ribbon DOE51_RS07190 PF03831 PhnA domain DOE51_RS07245 PF02576 RimP N-terminal domain DOE51_RS07245 PF17384 RimP C-terminal SH3 domain DOE51_RS07250 PF13184 NusA-like KH domain DOE51_RS07250 PF00575 S1 RNA binding domain DOE51_RS07250 PF08529 NusA N-terminal domain DOE51_RS07255 PF00009 Elongation factor Tu GTP binding domain DOE51_RS07255 PF11987 Translation-initiation factor 2 DOE51_RS07255 PF04760 Translation initiation factor IF-2, N-terminal region DOE51_RS07260 PF02033 Ribosome-binding factor A DOE51_RS07265 PF01509 TruB family pseudouridylate synthase (N terminal domain) DOE51_RS07265 PF16198 tRNA pseudouridylate synthase B C-terminal domain DOE51_RS07270 PF00312 Ribosomal protein S15 DOE51_RS07275 PF00575 S1 RNA binding domain DOE51_RS07275 PF00013 KH domain DOE51_RS07275 PF03725 3' exoribonuclease family, domain 2 DOE51_RS07275 PF01138 3' exoribonuclease family, domain 1 DOE51_RS07275 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DOE51_RS07280 PF00675 Insulinase (Peptidase family M16) DOE51_RS07280 PF05193 Peptidase M16 inactive domain DOE51_RS07285 PF00692 dUTPase DOE51_RS07310 PF00535 Glycosyl transferase family 2 DOE51_RS07325 PF01119 DNA mismatch repair protein, C-terminal domain DOE51_RS07325 PF08676 MutL C terminal dimerisation domain DOE51_RS07335 PF08340 Domain of unknown function (DUF1732) DOE51_RS07335 PF03755 YicC-like family, N-terminal region DOE51_RS07340 PF00625 Guanylate kinase DOE51_RS07345 PF01192 RNA polymerase Rpb6 DOE51_RS07350 PF13291 ACT domain DOE51_RS07350 PF02824 TGS domain DOE51_RS07350 PF04607 Region found in RelA / SpoT proteins DOE51_RS07355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS07355 PF00989 PAS fold DOE51_RS07355 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS07370 PF00436 Single-strand binding protein family DOE51_RS07410 PF07963 Prokaryotic N-terminal methylation motif DOE51_RS07410 PF08334 Type II secretion system (T2SS), protein G DOE51_RS07415 PF00482 Type II secretion system (T2SS), protein F DOE51_RS07420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DOE51_RS07420 PF00437 Type II/IV secretion system protein DOE51_RS07425 PF03958 Bacterial type II/III secretion system short domain DOE51_RS07425 PF00263 Bacterial type II and III secretion system protein DOE51_RS07440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS07440 PF02203 Tar ligand binding domain homologue DOE51_RS07440 PF00672 HAMP domain DOE51_RS07445 PF00089 Trypsin DOE51_RS07455 PF01923 Cobalamin adenosyltransferase DOE51_RS07465 PF05140 ResB-like family DOE51_RS07470 PF05140 ResB-like family DOE51_RS07470 PF01578 Cytochrome C assembly protein DOE51_RS07480 PF13247 4Fe-4S dicluster domain DOE51_RS07480 PF12800 4Fe-4S binding domain DOE51_RS07530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOE51_RS07530 PF03129 Anticodon binding domain DOE51_RS07530 PF02824 TGS domain DOE51_RS07530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DOE51_RS07535 PF00707 Translation initiation factor IF-3, C-terminal domain DOE51_RS07535 PF05198 Translation initiation factor IF-3, N-terminal domain DOE51_RS07540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE51_RS07540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOE51_RS07545 PF00893 Small Multidrug Resistance protein DOE51_RS07575 PF01632 Ribosomal protein L35 DOE51_RS07580 PF00453 Ribosomal protein L20 DOE51_RS07585 PF01070 FMN-dependent dehydrogenase DOE51_RS07590 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DOE51_RS07615 PF00005 ABC transporter DOE51_RS07630 PF00588 SpoU rRNA Methylase family DOE51_RS07630 PF02527 rRNA small subunit methyltransferase G DOE51_RS07645 PF02527 rRNA small subunit methyltransferase G DOE51_RS07650 PF01409 tRNA synthetases class II core domain (F) DOE51_RS07650 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DOE51_RS07655 PF03147 Ferredoxin-fold anticodon binding domain DOE51_RS07655 PF01588 Putative tRNA binding domain DOE51_RS07655 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DOE51_RS07655 PF03483 B3/4 domain DOE51_RS07655 PF03484 tRNA synthetase B5 domain DOE51_RS07660 PF00216 Bacterial DNA-binding protein DOE51_RS07695 PF00909 Ammonium Transporter Family DOE51_RS07710 PF00300 Histidine phosphatase superfamily (branch 1) DOE51_RS07720 PF01475 Ferric uptake regulator family DOE51_RS07725 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS07725 PF00072 Response regulator receiver domain DOE51_RS07725 PF08448 PAS fold DOE51_RS07725 PF13188 PAS domain DOE51_RS07730 PF12849 PBP superfamily domain DOE51_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS07745 PF00005 ABC transporter DOE51_RS07760 PF02350 UDP-N-acetylglucosamine 2-epimerase DOE51_RS07770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DOE51_RS07770 PF13632 Glycosyl transferase family group 2 DOE51_RS07790 PF00535 Glycosyl transferase family 2 DOE51_RS07795 PF00483 Nucleotidyl transferase DOE51_RS07800 PF16363 GDP-mannose 4,6 dehydratase DOE51_RS07805 PF16363 GDP-mannose 4,6 dehydratase DOE51_RS07810 PF07484 Phage Tail Collar Domain DOE51_RS07815 PF16363 GDP-mannose 4,6 dehydratase DOE51_RS07825 PF00534 Glycosyl transferases group 1 DOE51_RS07825 PF13439 Glycosyltransferase Family 4 DOE51_RS07835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DOE51_RS07835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DOE51_RS07835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DOE51_RS07840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DOE51_RS07840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DOE51_RS07845 PF00132 Bacterial transferase hexapeptide (six repeats) DOE51_RS07855 PF13439 Glycosyltransferase Family 4 DOE51_RS07860 PF02911 Formyl transferase, C-terminal domain DOE51_RS07860 PF00551 Formyl transferase DOE51_RS07875 PF02350 UDP-N-acetylglucosamine 2-epimerase DOE51_RS07880 PF13579 Glycosyl transferase 4-like domain DOE51_RS07880 PF00534 Glycosyl transferases group 1 DOE51_RS07885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOE51_RS07895 PF02719 Polysaccharide biosynthesis protein DOE51_RS07900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOE51_RS07905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DOE51_RS07905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DOE51_RS07905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DOE51_RS07915 PF02219 Methylenetetrahydrofolate reductase DOE51_RS07920 PF00809 Pterin binding enzyme DOE51_RS07920 PF02965 Vitamin B12 dependent methionine synthase, activation domain DOE51_RS07920 PF02607 B12 binding domain DOE51_RS07920 PF02310 B12 binding domain DOE51_RS07920 PF02574 Homocysteine S-methyltransferase DOE51_RS07930 PF00291 Pyridoxal-phosphate dependent enzyme DOE51_RS07935 PF03372 Endonuclease/Exonuclease/phosphatase family DOE51_RS07965 PF03030 Inorganic H+ pyrophosphatase DOE51_RS07990 PF18389 TrmO C-terminal domain DOE51_RS07990 PF01980 tRNA-methyltransferase O DOE51_RS08000 PF09334 tRNA synthetases class I (M) DOE51_RS08000 PF08264 Anticodon-binding domain of tRNA DOE51_RS08000 PF01588 Putative tRNA binding domain DOE51_RS08005 PF00484 Carbonic anhydrase DOE51_RS08010 PF01063 Amino-transferase class IV DOE51_RS08025 PF00535 Glycosyl transferase family 2 DOE51_RS08045 PF01638 HxlR-like helix-turn-helix DOE51_RS08050 PF02525 Flavodoxin-like fold DOE51_RS08055 PF00106 short chain dehydrogenase DOE51_RS08065 PF00376 MerR family regulatory protein DOE51_RS08065 PF09278 MerR, DNA binding DOE51_RS08075 PF00440 Bacterial regulatory proteins, tetR family DOE51_RS08080 PF01494 FAD binding domain DOE51_RS08115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS08115 PF03466 LysR substrate binding domain DOE51_RS08120 PF07690 Major Facilitator Superfamily DOE51_RS08155 PF00561 alpha/beta hydrolase fold DOE51_RS08160 PF01551 Peptidase family M23 DOE51_RS08160 PF08525 Opacity-associated protein A N-terminal motif DOE51_RS08160 PF01476 LysM domain DOE51_RS08180 PF00072 Response regulator receiver domain DOE51_RS08180 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS08195 PF07690 Major Facilitator Superfamily DOE51_RS08200 PF00672 HAMP domain DOE51_RS08200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS08200 PF02203 Tar ligand binding domain homologue DOE51_RS08215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DOE51_RS08215 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS08260 PF03193 RsgA GTPase DOE51_RS08285 PF02203 Tar ligand binding domain homologue DOE51_RS08285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS08285 PF00672 HAMP domain DOE51_RS08310 PF00893 Small Multidrug Resistance protein DOE51_RS08320 PF03358 NADPH-dependent FMN reductase DOE51_RS08325 PF03814 Potassium-transporting ATPase A subunit DOE51_RS08335 PF02669 K+-transporting ATPase, c chain DOE51_RS08340 PF13492 GAF domain DOE51_RS08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS08340 PF02702 Osmosensitive K+ channel His kinase sensor domain DOE51_RS08340 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS08340 PF13493 Domain of unknown function (DUF4118) DOE51_RS08345 PF00072 Response regulator receiver domain DOE51_RS08345 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS08365 PF01042 Endoribonuclease L-PSP DOE51_RS08375 PF02405 Permease MlaE DOE51_RS08380 PF00005 ABC transporter DOE51_RS08380 PF09383 NIL domain DOE51_RS08395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DOE51_RS08395 PF00132 Bacterial transferase hexapeptide (six repeats) DOE51_RS08395 PF14602 Hexapeptide repeat of succinyl-transferase DOE51_RS08405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DOE51_RS08405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DOE51_RS08410 PF01177 Asp/Glu/Hydantoin racemase DOE51_RS08415 PF00571 CBS domain DOE51_RS08415 PF00478 IMP dehydrogenase / GMP reductase domain DOE51_RS08425 PF05368 NmrA-like family DOE51_RS08460 PF00583 Acetyltransferase (GNAT) family DOE51_RS08475 PF01479 S4 domain DOE51_RS08475 PF00849 RNA pseudouridylate synthase DOE51_RS08495 PF00873 AcrB/AcrD/AcrF family DOE51_RS08500 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DOE51_RS08520 PF13193 AMP-binding enzyme C-terminal domain DOE51_RS08520 PF00501 AMP-binding enzyme DOE51_RS08530 PF00578 AhpC/TSA family DOE51_RS08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS08540 PF00183 Hsp90 protein DOE51_RS08550 PF03301 Tryptophan 2,3-dioxygenase DOE51_RS08555 PF01212 Beta-eliminating lyase DOE51_RS08560 PF00491 Arginase family DOE51_RS08575 PF00654 Voltage gated chloride channel DOE51_RS08605 PF08331 Domain of unknown function (DUF1730) DOE51_RS08610 PF01743 Poly A polymerase head domain DOE51_RS08610 PF12627 Probable RNA and SrmB- binding site of polymerase A DOE51_RS08610 PF13735 tRNA nucleotidyltransferase domain 2 putative DOE51_RS08630 PF00072 Response regulator receiver domain DOE51_RS08635 PF00196 Bacterial regulatory proteins, luxR family DOE51_RS08635 PF00072 Response regulator receiver domain DOE51_RS08640 PF03061 Thioesterase superfamily DOE51_RS08655 PF16360 GTP-binding GTPase Middle Region DOE51_RS08655 PF01926 50S ribosome-binding GTPase DOE51_RS08655 PF13167 GTP-binding GTPase N-terminal DOE51_RS08660 PF03949 Malic enzyme, NAD binding domain DOE51_RS08660 PF00390 Malic enzyme, N-terminal domain DOE51_RS08660 PF01515 Phosphate acetyl/butaryl transferase DOE51_RS08670 PF00108 Thiolase, N-terminal domain DOE51_RS08670 PF02803 Thiolase, C-terminal domain DOE51_RS08675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DOE51_RS08675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DOE51_RS08675 PF00378 Enoyl-CoA hydratase/isomerase DOE51_RS08685 PF01266 FAD dependent oxidoreductase DOE51_RS08695 PF00854 POT family DOE51_RS08735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DOE51_RS08735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DOE51_RS08740 PF00378 Enoyl-CoA hydratase/isomerase DOE51_RS08745 PF01642 Methylmalonyl-CoA mutase DOE51_RS08745 PF02310 B12 binding domain DOE51_RS08765 PF02666 Phosphatidylserine decarboxylase DOE51_RS08775 PF01242 6-pyruvoyl tetrahydropterin synthase DOE51_RS08795 PF07670 Nucleoside recognition DOE51_RS08795 PF02421 Ferrous iron transport protein B DOE51_RS08795 PF07664 Ferrous iron transport protein B C terminus DOE51_RS08815 PF16363 GDP-mannose 4,6 dehydratase DOE51_RS08820 PF00483 Nucleotidyl transferase DOE51_RS08825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOE51_RS08830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS08830 PF00672 HAMP domain DOE51_RS08830 PF02203 Tar ligand binding domain homologue DOE51_RS08840 PF13533 Biotin-lipoyl like DOE51_RS08845 PF00005 ABC transporter DOE51_RS08850 PF00005 ABC transporter DOE51_RS08855 PF00005 ABC transporter DOE51_RS08870 PF13458 Periplasmic binding protein DOE51_RS08875 PF02653 Branched-chain amino acid transport system / permease component DOE51_RS08880 PF00005 ABC transporter DOE51_RS08880 PF12399 Branched-chain amino acid ATP-binding cassette transporter DOE51_RS08885 PF00005 ABC transporter DOE51_RS08905 PF13298 DNA polymerase Ligase (LigD) DOE51_RS08905 PF04679 ATP dependent DNA ligase C terminal region DOE51_RS08905 PF01068 ATP dependent DNA ligase domain DOE51_RS08910 PF02735 Ku70/Ku80 beta-barrel domain DOE51_RS08920 PF00255 Glutathione peroxidase DOE51_RS08925 PF00574 Clp protease DOE51_RS08930 PF13180 PDZ domain DOE51_RS08930 PF17820 PDZ domain DOE51_RS08935 PF12833 Helix-turn-helix domain DOE51_RS08945 PF00293 NUDIX domain DOE51_RS08950 PF00535 Glycosyl transferase family 2 DOE51_RS08980 PF12823 Domain of unknown function (DUF3817) DOE51_RS08990 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DOE51_RS09005 PF01066 CDP-alcohol phosphatidyltransferase DOE51_RS09010 PF03061 Thioesterase superfamily DOE51_RS09015 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DOE51_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS09025 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS09030 PF00072 Response regulator receiver domain DOE51_RS09030 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS09050 PF00171 Aldehyde dehydrogenase family DOE51_RS09055 PF01171 PP-loop family DOE51_RS09060 PF00004 ATPase family associated with various cellular activities (AAA) DOE51_RS09060 PF17862 AAA+ lid domain DOE51_RS09060 PF01434 Peptidase family M41 DOE51_RS09065 PF02457 DisA bacterial checkpoint controller nucleotide-binding DOE51_RS09075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DOE51_RS09075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DOE51_RS09075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DOE51_RS09075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DOE51_RS09080 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DOE51_RS09085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DOE51_RS09090 PF13302 Acetyltransferase (GNAT) domain DOE51_RS09100 PF00266 Aminotransferase class-V DOE51_RS09110 PF04055 Radical SAM superfamily DOE51_RS09110 PF00919 Uncharacterized protein family UPF0004 DOE51_RS09115 PF14622 Ribonuclease-III-like DOE51_RS09115 PF00035 Double-stranded RNA binding motif DOE51_RS09120 PF01926 50S ribosome-binding GTPase DOE51_RS09120 PF07650 KH domain DOE51_RS09125 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DOE51_RS09125 PF01926 50S ribosome-binding GTPase DOE51_RS09130 PF00209 Sodium:neurotransmitter symporter family DOE51_RS09140 PF00255 Glutathione peroxidase DOE51_RS09150 PF10397 Adenylosuccinate lyase C-terminus DOE51_RS09150 PF00206 Lyase DOE51_RS09155 PF17676 LD-carboxypeptidase C-terminal domain DOE51_RS09155 PF02016 LD-carboxypeptidase N-terminal domain DOE51_RS09165 PF02875 Mur ligase family, glutamate ligase domain DOE51_RS09165 PF01225 Mur ligase family, catalytic domain DOE51_RS09165 PF08245 Mur ligase middle domain DOE51_RS09170 PF05192 MutS domain III DOE51_RS09170 PF00488 MutS domain V DOE51_RS09170 PF05190 MutS family domain IV DOE51_RS09170 PF01624 MutS domain I DOE51_RS09170 PF05188 MutS domain II DOE51_RS09175 PF01966 HD domain DOE51_RS09175 PF01909 Nucleotidyltransferase domain DOE51_RS09175 PF08335 GlnD PII-uridylyltransferase DOE51_RS09185 PF07690 Major Facilitator Superfamily DOE51_RS09215 PF02657 Fe-S metabolism associated domain DOE51_RS09220 PF08719 Domain of unknown function (DUF1768) DOE51_RS09240 PF03466 LysR substrate binding domain DOE51_RS09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS09250 PF00719 Inorganic pyrophosphatase DOE51_RS09265 PF01709 Transcriptional regulator DOE51_RS09295 PF04102 SlyX DOE51_RS09300 PF00849 RNA pseudouridylate synthase DOE51_RS09300 PF01479 S4 domain DOE51_RS09325 PF00563 EAL domain DOE51_RS09325 PF00498 FHA domain DOE51_RS09325 PF00990 Diguanylate cyclase, GGDEF domain DOE51_RS09330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOE51_RS09335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DOE51_RS09335 PF02770 Acyl-CoA dehydrogenase, middle domain DOE51_RS09335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOE51_RS09340 PF02163 Peptidase family M50 DOE51_RS09345 PF00579 tRNA synthetases class I (W and Y) DOE51_RS09350 PF02616 Segregation and condensation protein ScpA DOE51_RS09355 PF04079 Segregation and condensation complex subunit ScpB DOE51_RS09390 PF00268 Ribonucleotide reductase, small chain DOE51_RS09395 PF00317 Ribonucleotide reductase, all-alpha domain DOE51_RS09395 PF02867 Ribonucleotide reductase, barrel domain DOE51_RS09395 PF03477 ATP cone domain DOE51_RS09400 PF04055 Radical SAM superfamily DOE51_RS09400 PF16199 Radical_SAM C-terminal domain DOE51_RS09435 PF03358 NADPH-dependent FMN reductase DOE51_RS09460 PF01476 LysM domain DOE51_RS09460 PF01551 Peptidase family M23 DOE51_RS09465 PF00464 Serine hydroxymethyltransferase DOE51_RS09470 PF02502 Ribose/Galactose Isomerase DOE51_RS09475 PF02801 Beta-ketoacyl synthase, C-terminal domain DOE51_RS09475 PF00109 Beta-ketoacyl synthase, N-terminal domain DOE51_RS09480 PF00550 Phosphopantetheine attachment site DOE51_RS09490 PF00698 Acyl transferase domain DOE51_RS09495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DOE51_RS09495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOE51_RS09500 PF01783 Ribosomal L32p protein family DOE51_RS09515 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS09520 PF00005 ABC transporter DOE51_RS09545 PF03485 Arginyl tRNA synthetase N terminal domain DOE51_RS09545 PF05746 DALR anticodon binding domain DOE51_RS09545 PF00750 tRNA synthetases class I (R) DOE51_RS09550 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DOE51_RS09550 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DOE51_RS09560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DOE51_RS09560 PF13360 PQQ-like domain DOE51_RS09585 PF03062 MBOAT, membrane-bound O-acyltransferase family DOE51_RS09615 PF13419 Haloacid dehalogenase-like hydrolase DOE51_RS09640 PF13180 PDZ domain DOE51_RS09655 PF05958 tRNA (Uracil-5-)-methyltransferase DOE51_RS09690 PF01171 PP-loop family DOE51_RS09695 PF02798 Glutathione S-transferase, N-terminal domain DOE51_RS09720 PF13302 Acetyltransferase (GNAT) domain DOE51_RS09745 PF14579 Helix-hairpin-helix motif DOE51_RS09745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOE51_RS09745 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOE51_RS09745 PF02811 PHP domain DOE51_RS09760 PF00117 Glutamine amidotransferase class-I DOE51_RS09760 PF00958 GMP synthase C terminal domain DOE51_RS09760 PF02540 NAD synthase DOE51_RS09765 PF00571 CBS domain DOE51_RS09765 PF00478 IMP dehydrogenase / GMP reductase domain DOE51_RS09770 PF00132 Bacterial transferase hexapeptide (six repeats) DOE51_RS09775 PF03781 Sulfatase-modifying factor enzyme 1 DOE51_RS09780 PF00999 Sodium/hydrogen exchanger family DOE51_RS09790 PF01938 TRAM domain DOE51_RS09790 PF04055 Radical SAM superfamily DOE51_RS09790 PF00919 Uncharacterized protein family UPF0004 DOE51_RS09830 PF00108 Thiolase, N-terminal domain DOE51_RS09830 PF02803 Thiolase, C-terminal domain DOE51_RS09835 PF01144 Coenzyme A transferase DOE51_RS09840 PF01144 Coenzyme A transferase DOE51_RS09850 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS09850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS09855 PF00072 Response regulator receiver domain DOE51_RS09860 PF00391 PEP-utilising enzyme, mobile domain DOE51_RS09860 PF00224 Pyruvate kinase, barrel domain DOE51_RS09860 PF02887 Pyruvate kinase, alpha/beta domain DOE51_RS09885 PF00216 Bacterial DNA-binding protein DOE51_RS09920 PF03968 OstA-like protein DOE51_RS09920 PF04453 LPS transport system D DOE51_RS09930 PF01351 Ribonuclease HII DOE51_RS09935 PF01245 Ribosomal protein L19 DOE51_RS09940 PF09936 SAM-dependent RNA methyltransferase DOE51_RS09945 PF01746 tRNA (Guanine-1)-methyltransferase DOE51_RS09950 PF01782 RimM N-terminal domain DOE51_RS09960 PF00886 Ribosomal protein S16 DOE51_RS09965 PF02978 Signal peptide binding domain DOE51_RS09965 PF00448 SRP54-type protein, GTPase domain DOE51_RS09965 PF02881 SRP54-type protein, helical bundle domain DOE51_RS09980 PF01061 ABC-2 type transporter DOE51_RS09985 PF00005 ABC transporter DOE51_RS09990 PF00009 Elongation factor Tu GTP binding domain DOE51_RS09990 PF03144 Elongation factor Tu domain 2 DOE51_RS09990 PF16658 Class II release factor RF3, C-terminal domain DOE51_RS09995 PF00581 Rhodanese-like domain DOE51_RS09995 PF17773 UPF0176 acylphosphatase like domain DOE51_RS09995 PF12368 Rhodanase C-terminal DOE51_RS10005 PF00924 Mechanosensitive ion channel DOE51_RS10010 PF00982 Glycosyltransferase family 20 DOE51_RS10015 PF00723 Glycosyl hydrolases family 15 DOE51_RS10025 PF14659 Phage integrase, N-terminal SAM-like domain DOE51_RS10025 PF00589 Phage integrase family DOE51_RS10250 PF03734 L,D-transpeptidase catalytic domain DOE51_RS10320 PF12146 Serine aminopeptidase, S33 DOE51_RS10370 PF00857 Isochorismatase family DOE51_RS10380 PF01381 Helix-turn-helix DOE51_RS10385 PF00857 Isochorismatase family DOE51_RS10390 PF16325 Peptidase family U32 C-terminal domain DOE51_RS10390 PF01136 Peptidase family U32 DOE51_RS10400 PF17785 PUA-like domain DOE51_RS10400 PF10672 S-adenosylmethionine-dependent methyltransferase DOE51_RS10415 PF09334 tRNA synthetases class I (M) DOE51_RS10415 PF01588 Putative tRNA binding domain DOE51_RS10425 PF00199 Catalase DOE51_RS10430 PF02743 Cache domain DOE51_RS10430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS10430 PF00672 HAMP domain DOE51_RS10450 PF03466 LysR substrate binding domain DOE51_RS10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS10460 PF03358 NADPH-dependent FMN reductase DOE51_RS10475 PF00107 Zinc-binding dehydrogenase DOE51_RS10475 PF08240 Alcohol dehydrogenase GroES-like domain DOE51_RS10475 PF13823 Alcohol dehydrogenase GroES-associated DOE51_RS10505 PF00293 NUDIX domain DOE51_RS10515 PF00075 RNase H DOE51_RS10525 PF00072 Response regulator receiver domain DOE51_RS10525 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS10525 PF18415 Histidine kinase receptor ArcB trans-membrane domain DOE51_RS10525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS10525 PF00989 PAS fold DOE51_RS10525 PF01627 Hpt domain DOE51_RS10540 PF01225 Mur ligase family, catalytic domain DOE51_RS10540 PF02875 Mur ligase family, glutamate ligase domain DOE51_RS10540 PF08245 Mur ligase middle domain DOE51_RS10545 PF03649 Uncharacterised protein family (UPF0014) DOE51_RS10615 PF00012 Hsp70 protein DOE51_RS10625 PF00106 short chain dehydrogenase DOE51_RS10630 PF01594 AI-2E family transporter DOE51_RS10640 PF05683 Fumarase C-terminus DOE51_RS10640 PF05681 Fumarate hydratase (Fumerase) DOE51_RS10655 PF00072 Response regulator receiver domain DOE51_RS10655 PF00196 Bacterial regulatory proteins, luxR family DOE51_RS10665 PF00654 Voltage gated chloride channel DOE51_RS10670 PF03060 Nitronate monooxygenase DOE51_RS10685 PF01925 Sulfite exporter TauE/SafE DOE51_RS10695 PF07690 Major Facilitator Superfamily DOE51_RS10700 PF00472 RF-1 domain DOE51_RS10710 PF12072 Domain of unknown function (DUF3552) DOE51_RS10710 PF01966 HD domain DOE51_RS10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS10715 PF00072 Response regulator receiver domain DOE51_RS10720 PF00248 Aldo/keto reductase family DOE51_RS10725 PF00571 CBS domain DOE51_RS10725 PF03471 Transporter associated domain DOE51_RS10725 PF01595 Cyclin M transmembrane N-terminal domain DOE51_RS10730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DOE51_RS10730 PF02770 Acyl-CoA dehydrogenase, middle domain DOE51_RS10730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOE51_RS10730 PF09317 Domain of unknown function (DUF1974) DOE51_RS10740 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DOE51_RS10740 PF06827 Zinc finger found in FPG and IleRS DOE51_RS10740 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DOE51_RS10755 PF01522 Polysaccharide deacetylase DOE51_RS10780 PF13419 Haloacid dehalogenase-like hydrolase DOE51_RS10825 PF00107 Zinc-binding dehydrogenase DOE51_RS10825 PF08240 Alcohol dehydrogenase GroES-like domain DOE51_RS10840 PF00684 DnaJ central domain DOE51_RS10840 PF00226 DnaJ domain DOE51_RS10840 PF01556 DnaJ C terminal domain DOE51_RS10870 PF01343 Peptidase family S49 DOE51_RS10870 PF08496 Peptidase family S49 N-terminal DOE51_RS10875 PF00005 ABC transporter DOE51_RS10875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DOE51_RS10880 PF00005 ABC transporter DOE51_RS10880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DOE51_RS10885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOE51_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS10895 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS10895 PF12911 N-terminal TM domain of oligopeptide transport permease C DOE51_RS10905 PF02416 mttA/Hcf106 family DOE51_RS10910 PF03009 Glycerophosphoryl diester phosphodiesterase family DOE51_RS10920 PF01272 Transcription elongation factor, GreA/GreB, C-term DOE51_RS10920 PF03449 Transcription elongation factor, N-terminal DOE51_RS10925 PF04324 BFD-like [2Fe-2S] binding domain DOE51_RS10925 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS10935 PF08443 RimK-like ATP-grasp domain DOE51_RS10935 PF18030 RimK PreATP-grasp domain DOE51_RS10940 PF16123 Hydroxyacylglutathione hydrolase C-terminus DOE51_RS10940 PF00753 Metallo-beta-lactamase superfamily DOE51_RS10945 PF01370 NAD dependent epimerase/dehydratase family DOE51_RS10945 PF08338 Domain of unknown function (DUF1731) DOE51_RS10950 PF03441 FAD binding domain of DNA photolyase DOE51_RS10950 PF00875 DNA photolyase DOE51_RS10955 PF03109 ABC1 family DOE51_RS10960 PF00578 AhpC/TSA family DOE51_RS10985 PF01545 Cation efflux family DOE51_RS10985 PF16916 Dimerisation domain of Zinc Transporter DOE51_RS10990 PF02628 Cytochrome oxidase assembly protein DOE51_RS10990 PF01040 UbiA prenyltransferase family DOE51_RS11000 PF04134 Protein of unknown function, DUF393 DOE51_RS11005 PF00293 NUDIX domain DOE51_RS11010 PF02690 Na+/Pi-cotransporter DOE51_RS11025 PF00403 Heavy-metal-associated domain DOE51_RS11045 PF06508 Queuosine biosynthesis protein QueC DOE51_RS11050 PF02272 DHHA1 domain DOE51_RS11050 PF01368 DHH family DOE51_RS11050 PF17768 RecJ OB domain DOE51_RS11055 PF07549 SecD/SecF GG Motif DOE51_RS11055 PF02355 Protein export membrane protein DOE51_RS11060 PF07549 SecD/SecF GG Motif DOE51_RS11060 PF02355 Protein export membrane protein DOE51_RS11065 PF02699 Preprotein translocase subunit DOE51_RS11070 PF01702 Queuine tRNA-ribosyltransferase DOE51_RS11075 PF02547 Queuosine biosynthesis protein DOE51_RS11080 PF02321 Outer membrane efflux protein DOE51_RS11085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DOE51_RS11105 PF01980 tRNA-methyltransferase O DOE51_RS11105 PF18389 TrmO C-terminal domain DOE51_RS11110 PF08264 Anticodon-binding domain of tRNA DOE51_RS11110 PF00133 tRNA synthetases class I (I, L, M and V) DOE51_RS11115 PF06965 Na+/H+ antiporter 1 DOE51_RS11115 PF13462 Thioredoxin DOE51_RS11150 PF00171 Aldehyde dehydrogenase family DOE51_RS11170 PF00485 Phosphoribulokinase / Uridine kinase family DOE51_RS11175 PF01872 RibD C-terminal domain DOE51_RS11195 PF00210 Ferritin-like domain DOE51_RS11225 PF06736 Protein of unknown function (DUF1211) DOE51_RS11240 PF02678 Pirin DOE51_RS11240 PF17954 Quercetinase C-terminal cupin domain DOE51_RS11250 PF00171 Aldehyde dehydrogenase family DOE51_RS11255 PF00999 Sodium/hydrogen exchanger family DOE51_RS11255 PF02254 TrkA-N domain DOE51_RS11260 PF00082 Subtilase family DOE51_RS11265 PF00082 Subtilase family DOE51_RS11270 PF00535 Glycosyl transferase family 2 DOE51_RS11300 PF00873 AcrB/AcrD/AcrF family DOE51_RS11310 PF07504 Fungalysin/Thermolysin Propeptide Motif DOE51_RS11310 PF02868 Thermolysin metallopeptidase, alpha-helical domain DOE51_RS11310 PF03413 Peptidase propeptide and YPEB domain DOE51_RS11310 PF01447 Thermolysin metallopeptidase, catalytic domain DOE51_RS11315 PF00999 Sodium/hydrogen exchanger family DOE51_RS11315 PF02254 TrkA-N domain DOE51_RS11320 PF04073 Aminoacyl-tRNA editing domain DOE51_RS11330 PF06794 Uncharacterised protein family (UPF0270) DOE51_RS11385 PF00654 Voltage gated chloride channel DOE51_RS11390 PF00793 DAHP synthetase I family DOE51_RS11395 PF00893 Small Multidrug Resistance protein DOE51_RS11400 PF13335 Magnesium chelatase, subunit ChlI C-terminal DOE51_RS11400 PF01078 Magnesium chelatase, subunit ChlI DOE51_RS11410 PF00561 alpha/beta hydrolase fold DOE51_RS11480 PF03949 Malic enzyme, NAD binding domain DOE51_RS11480 PF00390 Malic enzyme, N-terminal domain DOE51_RS11485 PF01638 HxlR-like helix-turn-helix DOE51_RS11490 PF02798 Glutathione S-transferase, N-terminal domain DOE51_RS11490 PF00043 Glutathione S-transferase, C-terminal domain DOE51_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS11500 PF03466 LysR substrate binding domain DOE51_RS11505 PF07690 Major Facilitator Superfamily DOE51_RS11510 PF08021 Siderophore-interacting FAD-binding domain DOE51_RS11510 PF04954 Siderophore-interacting protein DOE51_RS11515 PF03551 Transcriptional regulator PadR-like family DOE51_RS11525 PF13649 Methyltransferase domain DOE51_RS11550 PF13649 Methyltransferase domain DOE51_RS11555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOE51_RS11600 PF00484 Carbonic anhydrase DOE51_RS11605 PF02899 Phage integrase, N-terminal SAM-like domain DOE51_RS11605 PF00589 Phage integrase family DOE51_RS11630 PF08486 Stage II sporulation protein DOE51_RS11635 PF01145 SPFH domain / Band 7 family DOE51_RS11665 PF03023 Lipid II flippase MurJ DOE51_RS11670 PF08459 UvrC Helix-hairpin-helix N-terminal DOE51_RS11670 PF01541 GIY-YIG catalytic domain DOE51_RS11670 PF02151 UvrB/uvrC motif DOE51_RS11675 PF00271 Helicase conserved C-terminal domain DOE51_RS11675 PF02151 UvrB/uvrC motif DOE51_RS11675 PF12344 Ultra-violet resistance protein B DOE51_RS11675 PF17757 UvrB interaction domain DOE51_RS11675 PF04851 Type III restriction enzyme, res subunit DOE51_RS11680 PF01804 Penicillin amidase DOE51_RS11685 PF09190 DALR domain DOE51_RS11685 PF01406 tRNA synthetases class I (C) catalytic domain DOE51_RS11690 PF00749 tRNA synthetases class I (E and Q), catalytic domain DOE51_RS11695 PF02559 CarD-like/TRCF domain DOE51_RS11700 PF00082 Subtilase family DOE51_RS11710 PF17191 RecG wedge domain DOE51_RS11710 PF00271 Helicase conserved C-terminal domain DOE51_RS11710 PF00270 DEAD/DEAH box helicase DOE51_RS11715 PF01966 HD domain DOE51_RS11715 PF11871 Domain of unknown function (DUF3391) DOE51_RS11730 PF00188 Cysteine-rich secretory protein family DOE51_RS11745 PF00072 Response regulator receiver domain DOE51_RS11745 PF09308 LuxQ, periplasmic DOE51_RS11745 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS11745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS11765 PF01336 OB-fold nucleic acid binding domain DOE51_RS11765 PF00152 tRNA synthetases class II (D, K and N) DOE51_RS11770 PF01791 DeoC/LacD family aldolase DOE51_RS11775 PF01521 Iron-sulphur cluster biosynthesis DOE51_RS11775 PF01106 NifU-like domain DOE51_RS11780 PF01554 MatE DOE51_RS11800 PF00083 Sugar (and other) transporter DOE51_RS11805 PF03109 ABC1 family DOE51_RS11810 PF03476 MOSC N-terminal beta barrel domain DOE51_RS11810 PF03473 MOSC domain DOE51_RS11810 PF00111 2Fe-2S iron-sulfur cluster binding domain DOE51_RS11825 PF05199 GMC oxidoreductase DOE51_RS11850 PF00899 ThiF family DOE51_RS11855 PF01026 TatD related DNase DOE51_RS11870 PF01479 S4 domain DOE51_RS11870 PF00849 RNA pseudouridylate synthase DOE51_RS11890 PF02926 THUMP domain DOE51_RS11890 PF10672 S-adenosylmethionine-dependent methyltransferase DOE51_RS11890 PF01170 Putative RNA methylase family UPF0020 DOE51_RS11910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DOE51_RS11915 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DOE51_RS11950 PF12706 Beta-lactamase superfamily domain DOE51_RS11960 PF13396 Phospholipase_D-nuclease N-terminal DOE51_RS11960 PF13091 PLD-like domain DOE51_RS11980 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS11980 PF00072 Response regulator receiver domain DOE51_RS11990 PF00672 HAMP domain DOE51_RS11990 PF07228 Stage II sporulation protein E (SpoIIE) DOE51_RS12000 PF00072 Response regulator receiver domain DOE51_RS12000 PF01627 Hpt domain DOE51_RS12000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS12000 PF01584 CheW-like domain DOE51_RS12005 PF00072 Response regulator receiver domain DOE51_RS12015 PF00471 Ribosomal protein L33 DOE51_RS12055 PF11849 Domain of unknown function (DUF3369) DOE51_RS12070 PF00082 Subtilase family DOE51_RS12070 PF05922 Peptidase inhibitor I9 DOE51_RS12090 PF00175 Oxidoreductase NAD-binding domain DOE51_RS12090 PF00970 Oxidoreductase FAD-binding domain DOE51_RS12090 PF00111 2Fe-2S iron-sulfur cluster binding domain DOE51_RS12110 PF00005 ABC transporter DOE51_RS12110 PF17760 UvrA interaction domain DOE51_RS12110 PF17755 UvrA DNA-binding domain DOE51_RS12120 PF01475 Ferric uptake regulator family DOE51_RS12125 PF02649 Type I GTP cyclohydrolase folE2 DOE51_RS12130 PF02545 Maf-like protein DOE51_RS12135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DOE51_RS12170 PF04085 rod shape-determining protein MreC DOE51_RS12180 PF00905 Penicillin binding protein transpeptidase domain DOE51_RS12180 PF03717 Penicillin-binding Protein dimerisation domain DOE51_RS12185 PF01098 Cell cycle protein DOE51_RS12195 PF08240 Alcohol dehydrogenase GroES-like domain DOE51_RS12195 PF00107 Zinc-binding dehydrogenase DOE51_RS12200 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DOE51_RS12200 PF01464 Transglycosylase SLT domain DOE51_RS12220 PF00085 Thioredoxin DOE51_RS12235 PF02481 DNA recombination-mediator protein A DOE51_RS12255 PF03772 Competence protein DOE51_RS12255 PF00753 Metallo-beta-lactamase superfamily DOE51_RS12265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DOE51_RS12265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DOE51_RS12290 PF02627 Carboxymuconolactone decarboxylase family DOE51_RS12295 PF12833 Helix-turn-helix domain DOE51_RS12295 PF02311 AraC-like ligand binding domain DOE51_RS12300 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DOE51_RS12310 PF17864 RuvB AAA lid domain DOE51_RS12310 PF05496 Holliday junction DNA helicase RuvB P-loop domain DOE51_RS12310 PF05491 RuvB C-terminal winged helix domain DOE51_RS12315 PF07499 RuvA, C-terminal domain DOE51_RS12315 PF01330 RuvA N terminal domain DOE51_RS12320 PF02075 Crossover junction endodeoxyribonuclease RuvC DOE51_RS12330 PF09285 Elongation factor P, C-terminal DOE51_RS12330 PF08207 Elongation factor P (EF-P) KOW-like domain DOE51_RS12330 PF01132 Elongation factor P (EF-P) OB domain DOE51_RS12345 PF01103 Surface antigen DOE51_RS12345 PF07244 Surface antigen variable number repeat DOE51_RS12345 PF17243 POTRA domain TamA domain 1 DOE51_RS12370 PF03972 MmgE/PrpD family DOE51_RS12390 PF13091 PLD-like domain DOE51_RS12390 PF13396 Phospholipase_D-nuclease N-terminal DOE51_RS12395 PF00285 Citrate synthase, C-terminal domain DOE51_RS12405 PF00905 Penicillin binding protein transpeptidase domain DOE51_RS12405 PF05569 BlaR1 peptidase M56 DOE51_RS12415 PF14760 Rnk N-terminus DOE51_RS12415 PF01272 Transcription elongation factor, GreA/GreB, C-term DOE51_RS12440 PF01152 Bacterial-like globin DOE51_RS12450 PF01433 Peptidase family M1 domain DOE51_RS12450 PF11940 Domain of unknown function (DUF3458) Ig-like fold DOE51_RS12450 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DOE51_RS12455 PF01227 GTP cyclohydrolase I DOE51_RS12515 PF01593 Flavin containing amine oxidoreductase DOE51_RS12525 PF00005 ABC transporter DOE51_RS12525 PF00664 ABC transporter transmembrane region DOE51_RS12530 PF00664 ABC transporter transmembrane region DOE51_RS12530 PF00005 ABC transporter DOE51_RS12535 PF03448 MgtE intracellular N domain DOE51_RS12535 PF01769 Divalent cation transporter DOE51_RS12535 PF00571 CBS domain DOE51_RS12560 PF00082 Subtilase family DOE51_RS12580 PF05726 Pirin C-terminal cupin domain DOE51_RS12580 PF02678 Pirin DOE51_RS12595 PF02789 Cytosol aminopeptidase family, N-terminal domain DOE51_RS12595 PF00883 Cytosol aminopeptidase family, catalytic domain DOE51_RS12605 PF04379 ApaG domain DOE51_RS12630 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DOE51_RS12630 PF01243 Pyridoxamine 5'-phosphate oxidase DOE51_RS12635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOE51_RS12635 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DOE51_RS12640 PF00072 Response regulator receiver domain DOE51_RS12640 PF02954 Bacterial regulatory protein, Fis family DOE51_RS12640 PF00158 Sigma-54 interaction domain DOE51_RS12665 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS12665 PF00072 Response regulator receiver domain DOE51_RS12670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS12670 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS12670 PF00672 HAMP domain DOE51_RS12680 PF03358 NADPH-dependent FMN reductase DOE51_RS12685 PF00005 ABC transporter DOE51_RS12685 PF00664 ABC transporter transmembrane region DOE51_RS12705 PF13545 Crp-like helix-turn-helix domain DOE51_RS12705 PF00027 Cyclic nucleotide-binding domain DOE51_RS12710 PF00403 Heavy-metal-associated domain DOE51_RS12720 PF00115 Cytochrome C and Quinol oxidase polypeptide I DOE51_RS12730 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DOE51_RS12730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DOE51_RS12735 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DOE51_RS12735 PF12801 4Fe-4S binding domain DOE51_RS12735 PF13746 4Fe-4S dicluster domain DOE51_RS12745 PF00691 OmpA family DOE51_RS12760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS12760 PF03466 LysR substrate binding domain DOE51_RS12765 PF00210 Ferritin-like domain DOE51_RS12775 PF00072 Response regulator receiver domain DOE51_RS12775 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS12780 PF13426 PAS domain DOE51_RS12780 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS12780 PF00672 HAMP domain DOE51_RS12805 PF00082 Subtilase family DOE51_RS12835 PF04542 Sigma-70 region 2 DOE51_RS12835 PF08281 Sigma-70, region 4 DOE51_RS12840 PF01641 SelR domain DOE51_RS12845 PF02683 Cytochrome C biogenesis protein transmembrane region DOE51_RS12845 PF00578 AhpC/TSA family DOE51_RS12845 PF17991 Thioredoxin like C-terminal domain DOE51_RS12850 PF05962 HutD DOE51_RS12860 PF00282 Pyridoxal-dependent decarboxylase conserved domain DOE51_RS12865 PF00266 Aminotransferase class-V DOE51_RS12900 PF08713 DNA alkylation repair enzyme DOE51_RS12905 PF02203 Tar ligand binding domain homologue DOE51_RS12905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS12905 PF00672 HAMP domain DOE51_RS12910 PF01152 Bacterial-like globin DOE51_RS12935 PF01037 Lrp/AsnC ligand binding domain DOE51_RS12945 PF07519 Tannase and feruloyl esterase DOE51_RS12970 PF00672 HAMP domain DOE51_RS12970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS12970 PF02203 Tar ligand binding domain homologue DOE51_RS13005 PF06224 Winged helix DNA-binding domain DOE51_RS13030 PF13087 AAA domain DOE51_RS13030 PF13195 Protein of unknown function (DUF4011) DOE51_RS13030 PF13195 Protein of unknown function (DUF4011) DOE51_RS13030 PF13087 AAA domain DOE51_RS13030 PF13086 AAA domain DOE51_RS13030 PF13086 AAA domain DOE51_RS13060 PF01814 Hemerythrin HHE cation binding domain DOE51_RS13080 PF01734 Patatin-like phospholipase DOE51_RS13085 PF10091 Putative glucoamylase DOE51_RS13085 PF06165 Glycosyltransferase family 36 DOE51_RS13085 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DOE51_RS13095 PF02798 Glutathione S-transferase, N-terminal domain DOE51_RS13095 PF00043 Glutathione S-transferase, C-terminal domain DOE51_RS13160 PF01979 Amidohydrolase family DOE51_RS13165 PF04279 Intracellular septation protein A DOE51_RS13170 PF03060 Nitronate monooxygenase DOE51_RS13175 PF00378 Enoyl-CoA hydratase/isomerase DOE51_RS13185 PF00082 Subtilase family DOE51_RS13190 PF02673 Bacitracin resistance protein BacA DOE51_RS13195 PF00924 Mechanosensitive ion channel DOE51_RS13230 PF02203 Tar ligand binding domain homologue DOE51_RS13230 PF00672 HAMP domain DOE51_RS13230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS13240 PF01520 N-acetylmuramoyl-L-alanine amidase DOE51_RS13245 PF03725 3' exoribonuclease family, domain 2 DOE51_RS13245 PF01138 3' exoribonuclease family, domain 1 DOE51_RS13250 PF01725 Ham1 family DOE51_RS13265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DOE51_RS13265 PF14572 Phosphoribosyl synthetase-associated domain DOE51_RS13270 PF01386 Ribosomal L25p family DOE51_RS13270 PF14693 Ribosomal protein TL5, C-terminal domain DOE51_RS13275 PF01195 Peptidyl-tRNA hydrolase DOE51_RS13280 PF01926 50S ribosome-binding GTPase DOE51_RS13280 PF06071 Protein of unknown function (DUF933) DOE51_RS13285 PF01425 Amidase DOE51_RS13290 PF12911 N-terminal TM domain of oligopeptide transport permease C DOE51_RS13290 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS13295 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS13300 PF01464 Transglycosylase SLT domain DOE51_RS13300 PF14718 Soluble lytic murein transglycosylase L domain DOE51_RS13305 PF18073 Rubredoxin metal binding domain DOE51_RS13325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DOE51_RS13325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DOE51_RS13345 PF01979 Amidohydrolase family DOE51_RS13350 PF00011 Hsp20/alpha crystallin family DOE51_RS13375 PF00300 Histidine phosphatase superfamily (branch 1) DOE51_RS13380 PF16078 2-oxoglutarate dehydrogenase N-terminus DOE51_RS13380 PF00676 Dehydrogenase E1 component DOE51_RS13380 PF16870 2-oxoglutarate dehydrogenase C-terminal DOE51_RS13380 PF02779 Transketolase, pyrimidine binding domain DOE51_RS13385 PF00364 Biotin-requiring enzyme DOE51_RS13385 PF02817 e3 binding domain DOE51_RS13385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DOE51_RS13395 PF03466 LysR substrate binding domain DOE51_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS13405 PF00106 short chain dehydrogenase DOE51_RS13410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOE51_RS13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS13420 PF04231 Endonuclease I DOE51_RS13470 PF00005 ABC transporter DOE51_RS13475 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS13485 PF17392 Urocanase C-terminal domain DOE51_RS13485 PF17391 Urocanase N-terminal domain DOE51_RS13485 PF01175 Urocanase Rossmann-like domain DOE51_RS13495 PF00221 Aromatic amino acid lyase DOE51_RS13510 PF00834 Ribulose-phosphate 3 epimerase family DOE51_RS13515 PF02911 Formyl transferase, C-terminal domain DOE51_RS13515 PF00551 Formyl transferase DOE51_RS13520 PF01327 Polypeptide deformylase DOE51_RS13530 PF00072 Response regulator receiver domain DOE51_RS13535 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DOE51_RS13535 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DOE51_RS13540 PF02237 Biotin protein ligase C terminal domain DOE51_RS13540 PF03099 Biotin/lipoate A/B protein ligase family DOE51_RS13540 PF08279 HTH domain DOE51_RS13560 PF00691 OmpA family DOE51_RS13560 PF04972 BON domain DOE51_RS13570 PF01914 MarC family integral membrane protein DOE51_RS13575 PF06826 Predicted Permease Membrane Region DOE51_RS13630 PF00330 Aconitase family (aconitate hydratase) DOE51_RS13630 PF00694 Aconitase C-terminal domain DOE51_RS13635 PF02146 Sir2 family DOE51_RS13640 PF12680 SnoaL-like domain DOE51_RS13650 PF01638 HxlR-like helix-turn-helix DOE51_RS13695 PF00092 von Willebrand factor type A domain DOE51_RS13695 PF07584 Aerotolerance regulator N-terminal DOE51_RS13715 PF17863 AAA lid domain DOE51_RS13715 PF07726 ATPase family associated with various cellular activities (AAA) DOE51_RS13720 PF01435 Peptidase family M48 DOE51_RS13730 PF13180 PDZ domain DOE51_RS13735 PF04026 SpoVG DOE51_RS13765 PF02583 Metal-sensitive transcriptional repressor DOE51_RS13770 PF00394 Multicopper oxidase DOE51_RS13770 PF07731 Multicopper oxidase DOE51_RS13770 PF07732 Multicopper oxidase DOE51_RS13800 PF13520 Amino acid permease DOE51_RS13805 PF00689 Cation transporting ATPase, C-terminus DOE51_RS13805 PF00690 Cation transporter/ATPase, N-terminus DOE51_RS13820 PF00005 ABC transporter DOE51_RS13845 PF00072 Response regulator receiver domain DOE51_RS13845 PF01627 Hpt domain DOE51_RS13845 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS13880 PF03466 LysR substrate binding domain DOE51_RS13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS13885 PF00270 DEAD/DEAH box helicase DOE51_RS13885 PF00271 Helicase conserved C-terminal domain DOE51_RS13905 PF00156 Phosphoribosyl transferase domain DOE51_RS13905 PF01738 Dienelactone hydrolase family DOE51_RS13915 PF00158 Sigma-54 interaction domain DOE51_RS13915 PF06490 Flagellar regulatory protein FleQ DOE51_RS13915 PF02954 Bacterial regulatory protein, Fis family DOE51_RS13920 PF00118 TCP-1/cpn60 chaperonin family DOE51_RS13990 PF00849 RNA pseudouridylate synthase DOE51_RS14015 PF00355 Rieske [2Fe-2S] domain DOE51_RS14070 PF03928 Haem-degrading DOE51_RS14080 PF02659 Putative manganese efflux pump DOE51_RS14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS14095 PF03466 LysR substrate binding domain DOE51_RS14110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DOE51_RS14115 PF13091 PLD-like domain DOE51_RS14135 PF17954 Quercetinase C-terminal cupin domain DOE51_RS14135 PF02678 Pirin DOE51_RS14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS14140 PF03466 LysR substrate binding domain DOE51_RS14150 PF04143 Sulphur transport DOE51_RS14155 PF06445 GyrI-like small molecule binding domain DOE51_RS14160 PF02954 Bacterial regulatory protein, Fis family DOE51_RS14160 PF00072 Response regulator receiver domain DOE51_RS14160 PF00158 Sigma-54 interaction domain DOE51_RS14165 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOE51_RS14165 PF00072 Response regulator receiver domain DOE51_RS14165 PF01627 Hpt domain DOE51_RS14165 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS14165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS14175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS14175 PF03466 LysR substrate binding domain DOE51_RS14180 PF10417 C-terminal domain of 1-Cys peroxiredoxin DOE51_RS14180 PF00578 AhpC/TSA family DOE51_RS14185 PF13192 Thioredoxin domain DOE51_RS14185 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS14195 PF01584 CheW-like domain DOE51_RS14200 PF03975 CheD chemotactic sensory transduction DOE51_RS14205 PF01739 CheR methyltransferase, SAM binding domain DOE51_RS14205 PF03705 CheR methyltransferase, all-alpha domain DOE51_RS14210 PF13426 PAS domain DOE51_RS14210 PF08447 PAS fold DOE51_RS14210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS14220 PF00271 Helicase conserved C-terminal domain DOE51_RS14220 PF04851 Type III restriction enzyme, res subunit DOE51_RS14230 PF00156 Phosphoribosyl transferase domain DOE51_RS14230 PF05139 Erythromycin esterase DOE51_RS14235 PF00144 Beta-lactamase DOE51_RS14240 PF00248 Aldo/keto reductase family DOE51_RS14245 PF00128 Alpha amylase, catalytic domain DOE51_RS14245 PF16657 Maltogenic Amylase, C-terminal domain DOE51_RS14250 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOE51_RS14250 PF00072 Response regulator receiver domain DOE51_RS14250 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS14325 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS14325 PF00072 Response regulator receiver domain DOE51_RS14330 PF09308 LuxQ, periplasmic DOE51_RS14330 PF00072 Response regulator receiver domain DOE51_RS14330 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS14335 PF00561 alpha/beta hydrolase fold DOE51_RS14360 PF07690 Major Facilitator Superfamily DOE51_RS14385 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS14385 PF01627 Hpt domain DOE51_RS14385 PF00072 Response regulator receiver domain DOE51_RS14385 PF17149 Periplasmic sensor domain found in signal transduction proteins DOE51_RS14385 PF00672 HAMP domain DOE51_RS14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS14405 PF00912 Transglycosylase DOE51_RS14415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DOE51_RS14435 PF01139 tRNA-splicing ligase RtcB DOE51_RS14440 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOE51_RS14455 PF00206 Lyase DOE51_RS14455 PF10415 Fumarase C C-terminus DOE51_RS14460 PF12706 Beta-lactamase superfamily domain DOE51_RS14495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DOE51_RS14495 PF00326 Prolyl oligopeptidase family DOE51_RS14520 PF00884 Sulfatase DOE51_RS14530 PF00462 Glutaredoxin DOE51_RS14540 PF01565 FAD binding domain DOE51_RS14540 PF02913 FAD linked oxidases, C-terminal domain DOE51_RS14560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOE51_RS14560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOE51_RS14565 PF00158 Sigma-54 interaction domain DOE51_RS14565 PF00072 Response regulator receiver domain DOE51_RS14565 PF02954 Bacterial regulatory protein, Fis family DOE51_RS14580 PF00753 Metallo-beta-lactamase superfamily DOE51_RS14590 PF03631 Virulence factor BrkB DOE51_RS14605 PF02142 MGS-like domain DOE51_RS14660 PF00672 HAMP domain DOE51_RS14660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS14660 PF02203 Tar ligand binding domain homologue DOE51_RS14690 PF00135 Carboxylesterase family DOE51_RS14700 PF00873 AcrB/AcrD/AcrF family DOE51_RS14720 PF00571 CBS domain DOE51_RS14740 PF01566 Natural resistance-associated macrophage protein DOE51_RS14745 PF03601 Conserved hypothetical protein 698 DOE51_RS14750 PF03466 LysR substrate binding domain DOE51_RS14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS14770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOE51_RS14770 PF18158 Adaptive response protein AidB N-terminal domain DOE51_RS14770 PF02770 Acyl-CoA dehydrogenase, middle domain DOE51_RS14800 PF01050 Mannose-6-phosphate isomerase DOE51_RS14800 PF00483 Nucleotidyl transferase DOE51_RS14830 PF00578 AhpC/TSA family DOE51_RS14835 PF01196 Ribosomal protein L17 DOE51_RS14840 PF01000 RNA polymerase Rpb3/RpoA insert domain DOE51_RS14840 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DOE51_RS14840 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DOE51_RS14845 PF01479 S4 domain DOE51_RS14845 PF00163 Ribosomal protein S4/S9 N-terminal domain DOE51_RS14850 PF00411 Ribosomal protein S11 DOE51_RS14855 PF00416 Ribosomal protein S13/S18 DOE51_RS14860 PF00444 Ribosomal protein L36 DOE51_RS14865 PF05191 Adenylate kinase, active site lid DOE51_RS14870 PF00344 SecY translocase DOE51_RS14875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DOE51_RS14880 PF00327 Ribosomal protein L30p/L7e DOE51_RS14885 PF03719 Ribosomal protein S5, C-terminal domain DOE51_RS14885 PF00333 Ribosomal protein S5, N-terminal domain DOE51_RS14890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DOE51_RS14895 PF00347 Ribosomal protein L6 DOE51_RS14900 PF00410 Ribosomal protein S8 DOE51_RS14905 PF00253 Ribosomal protein S14p/S29e DOE51_RS14910 PF00673 ribosomal L5P family C-terminus DOE51_RS14910 PF00281 Ribosomal protein L5 DOE51_RS14915 PF00238 Ribosomal protein L14p/L23e DOE51_RS14920 PF00366 Ribosomal protein S17 DOE51_RS14925 PF00831 Ribosomal L29 protein DOE51_RS14930 PF00252 Ribosomal protein L16p/L10e DOE51_RS14935 PF00189 Ribosomal protein S3, C-terminal domain DOE51_RS14935 PF07650 KH domain DOE51_RS14940 PF00237 Ribosomal protein L22p/L17e DOE51_RS14945 PF00203 Ribosomal protein S19 DOE51_RS14950 PF03947 Ribosomal Proteins L2, C-terminal domain DOE51_RS14950 PF00181 Ribosomal Proteins L2, RNA binding domain DOE51_RS14955 PF00276 Ribosomal protein L23 DOE51_RS14960 PF00573 Ribosomal protein L4/L1 family DOE51_RS14965 PF00297 Ribosomal protein L3 DOE51_RS14970 PF00338 Ribosomal protein S10p/S20e DOE51_RS14975 PF00009 Elongation factor Tu GTP binding domain DOE51_RS14975 PF00679 Elongation factor G C-terminus DOE51_RS14975 PF14492 Elongation Factor G, domain II DOE51_RS14975 PF03764 Elongation factor G, domain IV DOE51_RS14975 PF03144 Elongation factor Tu domain 2 DOE51_RS14980 PF00177 Ribosomal protein S7p/S5e DOE51_RS14985 PF00164 Ribosomal protein S12/S23 DOE51_RS14990 PF04998 RNA polymerase Rpb1, domain 5 DOE51_RS14990 PF05000 RNA polymerase Rpb1, domain 4 DOE51_RS14990 PF04997 RNA polymerase Rpb1, domain 1 DOE51_RS14990 PF04983 RNA polymerase Rpb1, domain 3 DOE51_RS14990 PF00623 RNA polymerase Rpb1, domain 2 DOE51_RS14995 PF04563 RNA polymerase beta subunit DOE51_RS14995 PF00562 RNA polymerase Rpb2, domain 6 DOE51_RS14995 PF10385 RNA polymerase beta subunit external 1 domain DOE51_RS14995 PF04565 RNA polymerase Rpb2, domain 3 DOE51_RS14995 PF04561 RNA polymerase Rpb2, domain 2 DOE51_RS14995 PF04560 RNA polymerase Rpb2, domain 7 DOE51_RS15000 PF16320 Ribosomal protein L7/L12 dimerisation domain DOE51_RS15000 PF00542 Ribosomal protein L7/L12 C-terminal domain DOE51_RS15005 PF00466 Ribosomal protein L10 DOE51_RS15010 PF00687 Ribosomal protein L1p/L10e family DOE51_RS15015 PF00298 Ribosomal protein L11, RNA binding domain DOE51_RS15015 PF03946 Ribosomal protein L11, N-terminal domain DOE51_RS15020 PF02357 Transcription termination factor nusG DOE51_RS15020 PF00467 KOW motif DOE51_RS15035 PF03143 Elongation factor Tu C-terminal domain DOE51_RS15035 PF03144 Elongation factor Tu domain 2 DOE51_RS15035 PF00009 Elongation factor Tu GTP binding domain DOE51_RS15055 PF00588 SpoU rRNA Methylase family DOE51_RS15055 PF08032 RNA 2'-O ribose methyltransferase substrate binding DOE51_RS15060 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DOE51_RS15065 PF02769 AIR synthase related protein, C-terminal domain DOE51_RS15065 PF00586 AIR synthase related protein, N-terminal domain DOE51_RS15070 PF02142 MGS-like domain DOE51_RS15070 PF01808 AICARFT/IMPCHase bienzyme DOE51_RS15080 PF00586 AIR synthase related protein, N-terminal domain DOE51_RS15080 PF02769 AIR synthase related protein, C-terminal domain DOE51_RS15080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DOE51_RS15085 PF00551 Formyl transferase DOE51_RS15090 PF02843 Phosphoribosylglycinamide synthetase, C domain DOE51_RS15090 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DOE51_RS15090 PF02844 Phosphoribosylglycinamide synthetase, N domain DOE51_RS15100 PF00731 AIR carboxylase DOE51_RS15105 PF00156 Phosphoribosyl transferase domain DOE51_RS15120 PF03129 Anticodon binding domain DOE51_RS15120 PF09180 Prolyl-tRNA synthetase, C-terminal DOE51_RS15120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOE51_RS15125 PF00158 Sigma-54 interaction domain DOE51_RS15125 PF00072 Response regulator receiver domain DOE51_RS15125 PF02954 Bacterial regulatory protein, Fis family DOE51_RS15130 PF00989 PAS fold DOE51_RS15130 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS15130 PF00672 HAMP domain DOE51_RS15135 PF00885 6,7-dimethyl-8-ribityllumazine synthase DOE51_RS15140 PF00925 GTP cyclohydrolase II DOE51_RS15140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DOE51_RS15145 PF00677 Lumazine binding domain DOE51_RS15165 PF02954 Bacterial regulatory protein, Fis family DOE51_RS15165 PF00158 Sigma-54 interaction domain DOE51_RS15165 PF00072 Response regulator receiver domain DOE51_RS15170 PF07043 Protein of unknown function (DUF1328) DOE51_RS15180 PF10431 C-terminal, D2-small domain, of ClpB protein DOE51_RS15180 PF00004 ATPase family associated with various cellular activities (AAA) DOE51_RS15180 PF02861 Clp amino terminal domain, pathogenicity island component DOE51_RS15180 PF17871 AAA lid domain DOE51_RS15180 PF07724 AAA domain (Cdc48 subfamily) DOE51_RS15190 PF00669 Bacterial flagellin N-terminal helical region DOE51_RS15190 PF00700 Bacterial flagellin C-terminal helical region DOE51_RS15215 PF00158 Sigma-54 interaction domain DOE51_RS15215 PF02954 Bacterial regulatory protein, Fis family DOE51_RS15215 PF00072 Response regulator receiver domain DOE51_RS15220 PF02899 Phage integrase, N-terminal SAM-like domain DOE51_RS15220 PF00589 Phage integrase family DOE51_RS15230 PF02565 Recombination protein O C terminal DOE51_RS15230 PF11967 Recombination protein O N terminal DOE51_RS15290 PF03466 LysR substrate binding domain DOE51_RS15290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS15295 PF03741 Integral membrane protein TerC family DOE51_RS15310 PF12838 4Fe-4S dicluster domain DOE51_RS15315 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DOE51_RS15315 PF00384 Molybdopterin oxidoreductase DOE51_RS15315 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DOE51_RS15320 PF10531 SLBB domain DOE51_RS15320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DOE51_RS15320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DOE51_RS15330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DOE51_RS15330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DOE51_RS15335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DOE51_RS15340 PF00082 Subtilase family DOE51_RS15345 PF04264 YceI-like domain DOE51_RS15355 PF05114 Protein of unknown function (DUF692) DOE51_RS15375 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOE51_RS15380 PF00873 AcrB/AcrD/AcrF family DOE51_RS15405 PF00664 ABC transporter transmembrane region DOE51_RS15405 PF00005 ABC transporter DOE51_RS15410 PF00664 ABC transporter transmembrane region DOE51_RS15410 PF00005 ABC transporter DOE51_RS15435 PF00528 Binding-protein-dependent transport system inner membrane component DOE51_RS15440 PF00005 ABC transporter DOE51_RS15455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DOE51_RS15460 PF08482 ATP-dependent helicase C-terminal DOE51_RS15460 PF00270 DEAD/DEAH box helicase DOE51_RS15460 PF00271 Helicase conserved C-terminal domain DOE51_RS15460 PF04408 Helicase associated domain (HA2) DOE51_RS15470 PF00163 Ribosomal protein S4/S9 N-terminal domain DOE51_RS15470 PF01479 S4 domain DOE51_RS15485 PF06426 Serine acetyltransferase, N-terminal DOE51_RS15485 PF00132 Bacterial transferase hexapeptide (six repeats) DOE51_RS15490 PF01336 OB-fold nucleic acid binding domain DOE51_RS15490 PF01966 HD domain DOE51_RS15510 PF00005 ABC transporter DOE51_RS15515 PF02405 Permease MlaE DOE51_RS15520 PF00842 Alanine racemase, C-terminal domain DOE51_RS15520 PF01168 Alanine racemase, N-terminal domain DOE51_RS15530 PF13188 PAS domain DOE51_RS15530 PF00072 Response regulator receiver domain DOE51_RS15530 PF08448 PAS fold DOE51_RS15530 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS15535 PF00890 FAD binding domain DOE51_RS15535 PF02910 Fumarate reductase flavoprotein C-term DOE51_RS15540 PF12146 Serine aminopeptidase, S33 DOE51_RS15550 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOE51_RS15555 PF00106 short chain dehydrogenase DOE51_RS15560 PF00075 RNase H DOE51_RS15580 PF00580 UvrD/REP helicase N-terminal domain DOE51_RS15580 PF13361 UvrD-like helicase C-terminal domain DOE51_RS15580 PF12705 PD-(D/E)XK nuclease superfamily DOE51_RS15620 PF01121 Dephospho-CoA kinase DOE51_RS15625 PF08308 PEGA domain DOE51_RS15625 PF00069 Protein kinase domain DOE51_RS15630 PF00501 AMP-binding enzyme DOE51_RS15650 PF01432 Peptidase family M3 DOE51_RS15655 PF01513 ATP-NAD kinase DOE51_RS15660 PF02463 RecF/RecN/SMC N terminal domain DOE51_RS15675 PF01654 Cytochrome bd terminal oxidase subunit I DOE51_RS15680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DOE51_RS15680 PF00326 Prolyl oligopeptidase family DOE51_RS15685 PF00694 Aconitase C-terminal domain DOE51_RS15685 PF00330 Aconitase family (aconitate hydratase) DOE51_RS15690 PF00293 NUDIX domain DOE51_RS15700 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS15700 PF00672 HAMP domain DOE51_RS15700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS15705 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS15705 PF00072 Response regulator receiver domain DOE51_RS15725 PF00149 Calcineurin-like phosphoesterase DOE51_RS15730 PF00091 Tubulin/FtsZ family, GTPase domain DOE51_RS15730 PF12327 FtsZ family, C-terminal domain DOE51_RS15735 PF02491 SHS2 domain inserted in FTSA DOE51_RS15745 PF02203 Tar ligand binding domain homologue DOE51_RS15745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS15745 PF00672 HAMP domain DOE51_RS15750 PF08245 Mur ligase middle domain DOE51_RS15750 PF01225 Mur ligase family, catalytic domain DOE51_RS15750 PF02875 Mur ligase family, glutamate ligase domain DOE51_RS15755 PF04101 Glycosyltransferase family 28 C-terminal domain DOE51_RS15755 PF03033 Glycosyltransferase family 28 N-terminal domain DOE51_RS15760 PF01098 Cell cycle protein DOE51_RS15770 PF02875 Mur ligase family, glutamate ligase domain DOE51_RS15770 PF08245 Mur ligase middle domain DOE51_RS15775 PF00953 Glycosyl transferase family 4 DOE51_RS15785 PF08245 Mur ligase middle domain DOE51_RS15785 PF01225 Mur ligase family, catalytic domain DOE51_RS15785 PF02875 Mur ligase family, glutamate ligase domain DOE51_RS15790 PF08245 Mur ligase middle domain DOE51_RS15790 PF02875 Mur ligase family, glutamate ligase domain DOE51_RS15790 PF01225 Mur ligase family, catalytic domain DOE51_RS15805 PF00905 Penicillin binding protein transpeptidase domain DOE51_RS15805 PF03717 Penicillin-binding Protein dimerisation domain DOE51_RS15805 PF03793 PASTA domain DOE51_RS15815 PF01795 MraW methylase family DOE51_RS15830 PF00156 Phosphoribosyl transferase domain DOE51_RS15845 PF02678 Pirin DOE51_RS15845 PF17954 Quercetinase C-terminal cupin domain DOE51_RS15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS15855 PF03466 LysR substrate binding domain DOE51_RS15860 PF00303 Thymidylate synthase DOE51_RS15865 PF00186 Dihydrofolate reductase DOE51_RS15875 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DOE51_RS15875 PF01565 FAD binding domain DOE51_RS15890 PF00440 Bacterial regulatory proteins, tetR family DOE51_RS15890 PF13977 BetI-type transcriptional repressor, C-terminal DOE51_RS15895 PF01464 Transglycosylase SLT domain DOE51_RS15895 PF10145 Phage-related minor tail protein DOE51_RS15895 PF01551 Peptidase family M23 DOE51_RS15905 PF01252 Signal peptidase (SPase) II DOE51_RS15915 PF02190 ATP-dependent protease La (LON) substrate-binding domain DOE51_RS15915 PF05362 Lon protease (S16) C-terminal proteolytic domain DOE51_RS15915 PF00004 ATPase family associated with various cellular activities (AAA) DOE51_RS15920 PF11490 DNA polymerase III polC-type N-terminus II DOE51_RS15920 PF02811 PHP domain DOE51_RS15920 PF14579 Helix-hairpin-helix motif DOE51_RS15920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOE51_RS15920 PF14480 DNA polymerase III polC-type N-terminus I DOE51_RS15920 PF00929 Exonuclease DOE51_RS15920 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOE51_RS15930 PF13677 Membrane MotB of proton-channel complex MotA/MotB DOE51_RS15930 PF00691 OmpA family DOE51_RS15935 PF01618 MotA/TolQ/ExbB proton channel family DOE51_RS15940 PF11412 Disulphide bond corrector protein DsbC DOE51_RS15940 PF02683 Cytochrome C biogenesis protein transmembrane region DOE51_RS15950 PF00672 HAMP domain DOE51_RS15950 PF02203 Tar ligand binding domain homologue DOE51_RS15950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOE51_RS15980 PF00849 RNA pseudouridylate synthase DOE51_RS15980 PF01479 S4 domain DOE51_RS16020 PF04452 RNA methyltransferase DOE51_RS16030 PF01467 Cytidylyltransferase-like DOE51_RS16030 PF00294 pfkB family carbohydrate kinase DOE51_RS16090 PF00899 ThiF family DOE51_RS16125 PF00005 ABC transporter DOE51_RS16135 PF17785 PUA-like domain DOE51_RS16135 PF10672 S-adenosylmethionine-dependent methyltransferase DOE51_RS16145 PF00355 Rieske [2Fe-2S] domain DOE51_RS16150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DOE51_RS16150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DOE51_RS16195 PF00158 Sigma-54 interaction domain DOE51_RS16195 PF02954 Bacterial regulatory protein, Fis family DOE51_RS16195 PF00072 Response regulator receiver domain DOE51_RS16200 PF04972 BON domain DOE51_RS16200 PF00263 Bacterial type II and III secretion system protein DOE51_RS16200 PF13629 Pilus formation protein N terminal region DOE51_RS16205 PF00437 Type II/IV secretion system protein DOE51_RS16225 PF02938 GAD domain DOE51_RS16225 PF00152 tRNA synthetases class II (D, K and N) DOE51_RS16225 PF01336 OB-fold nucleic acid binding domain DOE51_RS16235 PF00140 Sigma-70 factor, region 1.2 DOE51_RS16235 PF04542 Sigma-70 region 2 DOE51_RS16235 PF04545 Sigma-70, region 4 DOE51_RS16250 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DOE51_RS16250 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DOE51_RS16255 PF04539 Sigma-70 region 3 DOE51_RS16255 PF04542 Sigma-70 region 2 DOE51_RS16255 PF04545 Sigma-70, region 4 DOE51_RS16260 PF10609 NUBPL iron-transfer P-loop NTPase DOE51_RS16265 PF00448 SRP54-type protein, GTPase domain DOE51_RS16270 PF00771 FHIPEP family DOE51_RS16275 PF01312 FlhB HrpN YscU SpaS Family DOE51_RS16280 PF01311 Bacterial export proteins, family 1 DOE51_RS16285 PF01313 Bacterial export proteins, family 3 DOE51_RS16290 PF00813 FliP family DOE51_RS16300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DOE51_RS16300 PF04509 CheC-like family DOE51_RS16305 PF02154 Flagellar motor switch protein FliM DOE51_RS16305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DOE51_RS16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS16320 PF03466 LysR substrate binding domain DOE51_RS16325 PF04264 YceI-like domain DOE51_RS16330 PF00106 short chain dehydrogenase DOE51_RS16350 PF00459 Inositol monophosphatase family DOE51_RS16370 PF00580 UvrD/REP helicase N-terminal domain DOE51_RS16370 PF13361 UvrD-like helicase C-terminal domain DOE51_RS16390 PF04055 Radical SAM superfamily DOE51_RS16390 PF12544 Lysine-2,3-aminomutase DOE51_RS16430 PF00166 Chaperonin 10 Kd subunit DOE51_RS16435 PF00905 Penicillin binding protein transpeptidase domain DOE51_RS16435 PF14814 Bifunctional transglycosylase second domain DOE51_RS16435 PF00912 Transglycosylase DOE51_RS16445 PF00175 Oxidoreductase NAD-binding domain DOE51_RS16445 PF00970 Oxidoreductase FAD-binding domain DOE51_RS16445 PF00111 2Fe-2S iron-sulfur cluster binding domain DOE51_RS16460 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS16460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS16460 PF18698 Histidine kinase sensor domain DOE51_RS16460 PF00672 HAMP domain DOE51_RS16465 PF00158 Sigma-54 interaction domain DOE51_RS16465 PF00072 Response regulator receiver domain DOE51_RS16465 PF02954 Bacterial regulatory protein, Fis family DOE51_RS16480 PF01252 Signal peptidase (SPase) II DOE51_RS16485 PF00072 Response regulator receiver domain DOE51_RS16500 PF01297 Zinc-uptake complex component A periplasmic DOE51_RS16505 PF00005 ABC transporter DOE51_RS16520 PF01790 Prolipoprotein diacylglyceryl transferase DOE51_RS16535 PF03884 DNA gyrase inhibitor YacG DOE51_RS16540 PF00216 Bacterial DNA-binding protein DOE51_RS16545 PF00365 Phosphofructokinase DOE51_RS16550 PF13458 Periplasmic binding protein DOE51_RS16555 PF02653 Branched-chain amino acid transport system / permease component DOE51_RS16560 PF11862 Domain of unknown function (DUF3382) DOE51_RS16560 PF02653 Branched-chain amino acid transport system / permease component DOE51_RS16565 PF00005 ABC transporter DOE51_RS16565 PF12399 Branched-chain amino acid ATP-binding cassette transporter DOE51_RS16570 PF00005 ABC transporter DOE51_RS16575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS16575 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS16580 PF00072 Response regulator receiver domain DOE51_RS16580 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS16585 PF00460 Flagella basal body rod protein DOE51_RS16585 PF07559 Flagellar basal body protein FlaE DOE51_RS16585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOE51_RS16595 PF13861 FlgD Tudor-like domain DOE51_RS16595 PF13860 FlgD Ig-like domain DOE51_RS16595 PF03963 Flagellar hook capping protein - N-terminal region DOE51_RS16615 PF02874 ATP synthase alpha/beta family, beta-barrel domain DOE51_RS16615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOE51_RS16615 PF18269 T3SS EscN ATPase C-terminal domain DOE51_RS16620 PF02108 Flagellar assembly protein FliH DOE51_RS16625 PF14842 FliG N-terminal domain DOE51_RS16625 PF14841 FliG middle domain DOE51_RS16625 PF01706 FliG C-terminal domain DOE51_RS16630 PF01514 Secretory protein of YscJ/FliF family DOE51_RS16630 PF08345 Flagellar M-ring protein C-terminal DOE51_RS16635 PF02049 Flagellar hook-basal body complex protein FliE DOE51_RS16640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOE51_RS16640 PF00460 Flagella basal body rod protein DOE51_RS16645 PF00460 Flagella basal body rod protein DOE51_RS16650 PF00158 Sigma-54 interaction domain DOE51_RS16650 PF02954 Bacterial regulatory protein, Fis family DOE51_RS16665 PF02405 Permease MlaE DOE51_RS16670 PF00005 ABC transporter DOE51_RS16705 PF01134 Glucose inhibited division protein A DOE51_RS16715 PF00265 Thymidine kinase DOE51_RS16720 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOE51_RS16720 PF01464 Transglycosylase SLT domain DOE51_RS16730 PF01380 SIS domain DOE51_RS16735 PF12804 MobA-like NTP transferase domain DOE51_RS16735 PF00132 Bacterial transferase hexapeptide (six repeats) DOE51_RS16755 PF02954 Bacterial regulatory protein, Fis family DOE51_RS16755 PF00072 Response regulator receiver domain DOE51_RS16755 PF00158 Sigma-54 interaction domain DOE51_RS16770 PF00491 Arginase family DOE51_RS16775 PF14815 NUDIX domain DOE51_RS16775 PF00633 Helix-hairpin-helix motif DOE51_RS16775 PF00730 HhH-GPD superfamily base excision DNA repair protein DOE51_RS16800 PF00490 Delta-aminolevulinic acid dehydratase DOE51_RS16805 PF01488 Shikimate / quinate 5-dehydrogenase DOE51_RS16805 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DOE51_RS16805 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DOE51_RS16810 PF03900 Porphobilinogen deaminase, C-terminal domain DOE51_RS16810 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DOE51_RS16815 PF00202 Aminotransferase class-III DOE51_RS16820 PF00072 Response regulator receiver domain DOE51_RS16820 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS16820 PF01627 Hpt domain DOE51_RS16820 PF00672 HAMP domain DOE51_RS16820 PF17149 Periplasmic sensor domain found in signal transduction proteins DOE51_RS16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS16825 PF00072 Response regulator receiver domain DOE51_RS16825 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS16830 PF01208 Uroporphyrinogen decarboxylase (URO-D) DOE51_RS16835 PF04055 Radical SAM superfamily DOE51_RS16835 PF06969 HemN C-terminal domain DOE51_RS16845 PF00762 Ferrochelatase DOE51_RS16850 PF04172 LrgB-like family DOE51_RS16855 PF03788 LrgA family DOE51_RS16870 PF00270 DEAD/DEAH box helicase DOE51_RS16870 PF00271 Helicase conserved C-terminal domain DOE51_RS16870 PF12300 ATP-dependent RNA helicase RhlB DOE51_RS16875 PF12697 Alpha/beta hydrolase family DOE51_RS16880 PF01743 Poly A polymerase head domain DOE51_RS16880 PF12626 Polymerase A arginine-rich C-terminus DOE51_RS16880 PF12627 Probable RNA and SrmB- binding site of polymerase A DOE51_RS16890 PF00072 Response regulator receiver domain DOE51_RS16890 PF01339 CheB methylesterase DOE51_RS16895 PF03705 CheR methyltransferase, all-alpha domain DOE51_RS16895 PF01739 CheR methyltransferase, SAM binding domain DOE51_RS16900 PF01584 CheW-like domain DOE51_RS16900 PF09078 CheY binding DOE51_RS16900 PF02895 Signal transducing histidine kinase, homodimeric domain DOE51_RS16900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS16900 PF01627 Hpt domain DOE51_RS16905 PF01584 CheW-like domain DOE51_RS16920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DOE51_RS16925 PF02780 Transketolase, C-terminal domain DOE51_RS16925 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DOE51_RS16925 PF02779 Transketolase, pyrimidine binding domain DOE51_RS16930 PF00962 Adenosine/AMP deaminase DOE51_RS16940 PF00561 alpha/beta hydrolase fold DOE51_RS16955 PF12697 Alpha/beta hydrolase family DOE51_RS16960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DOE51_RS16965 PF00425 chorismate binding enzyme DOE51_RS16970 PF01817 Chorismate mutase type II DOE51_RS16970 PF00793 DAHP synthetase I family DOE51_RS16975 PF01209 ubiE/COQ5 methyltransferase family DOE51_RS16990 PF00378 Enoyl-CoA hydratase/isomerase DOE51_RS16995 PF01264 Chorismate synthase DOE51_RS17000 PF01202 Shikimate kinase DOE51_RS17005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DOE51_RS17010 PF01761 3-dehydroquinate synthase DOE51_RS17025 PF03167 Uracil DNA glycosylase superfamily DOE51_RS17035 PF00248 Aldo/keto reductase family DOE51_RS17040 PF14864 Alkyl sulfatase C-terminal DOE51_RS17040 PF00753 Metallo-beta-lactamase superfamily DOE51_RS17040 PF14863 Alkyl sulfatase dimerisation DOE51_RS17060 PF00717 Peptidase S24-like DOE51_RS17060 PF01726 LexA DNA binding domain DOE51_RS17070 PF13185 GAF domain DOE51_RS17080 PF01258 Prokaryotic dksA/traR C4-type zinc finger DOE51_RS17095 PF00440 Bacterial regulatory proteins, tetR family DOE51_RS17100 PF00905 Penicillin binding protein transpeptidase domain DOE51_RS17110 PF03372 Endonuclease/Exonuclease/phosphatase family DOE51_RS17115 PF00578 AhpC/TSA family DOE51_RS17155 PF01471 Putative peptidoglycan binding domain DOE51_RS17155 PF03572 Peptidase family S41 DOE51_RS17155 PF13180 PDZ domain DOE51_RS17160 PF01370 NAD dependent epimerase/dehydratase family DOE51_RS17170 PF00588 SpoU rRNA Methylase family DOE51_RS17190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DOE51_RS17190 PF01872 RibD C-terminal domain DOE51_RS17200 PF05970 PIF1-like helicase DOE51_RS17250 PF02548 Ketopantoate hydroxymethyltransferase DOE51_RS17255 PF02569 Pantoate-beta-alanine ligase DOE51_RS17260 PF04127 DNA / pantothenate metabolism flavoprotein DOE51_RS17260 PF02441 Flavoprotein DOE51_RS17265 PF03309 Type III pantothenate kinase DOE51_RS17270 PF02261 Aspartate decarboxylase DOE51_RS17280 PF12848 ABC transporter DOE51_RS17280 PF00005 ABC transporter DOE51_RS17315 PF00682 HMGL-like DOE51_RS17320 PF00364 Biotin-requiring enzyme DOE51_RS17325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOE51_RS17325 PF00289 Biotin carboxylase, N-terminal domain DOE51_RS17325 PF02785 Biotin carboxylase C-terminal domain DOE51_RS17330 PF00072 Response regulator receiver domain DOE51_RS17330 PF00486 Transcriptional regulatory protein, C terminal DOE51_RS17335 PF08448 PAS fold DOE51_RS17335 PF13188 PAS domain DOE51_RS17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS17335 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS17335 PF00072 Response regulator receiver domain DOE51_RS17345 PF00211 Adenylate and Guanylate cyclase catalytic domain DOE51_RS17350 PF00892 EamA-like transporter family DOE51_RS17355 PF00378 Enoyl-CoA hydratase/isomerase DOE51_RS17360 PF01039 Carboxyl transferase domain DOE51_RS17390 PF00005 ABC transporter DOE51_RS17445 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS17445 PF00672 HAMP domain DOE51_RS17445 PF17149 Periplasmic sensor domain found in signal transduction proteins DOE51_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS17445 PF00072 Response regulator receiver domain DOE51_RS17445 PF01627 Hpt domain DOE51_RS17455 PF10672 S-adenosylmethionine-dependent methyltransferase DOE51_RS17455 PF01170 Putative RNA methylase family UPF0020 DOE51_RS17465 PF17284 Spermidine synthase tetramerisation domain DOE51_RS17470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DOE51_RS17470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DOE51_RS17520 PF03466 LysR substrate binding domain DOE51_RS17520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS17525 PF04389 Peptidase family M28 DOE51_RS17525 PF04151 Bacterial pre-peptidase C-terminal domain DOE51_RS17560 PF00478 IMP dehydrogenase / GMP reductase domain DOE51_RS17560 PF00571 CBS domain DOE51_RS17565 PF00579 tRNA synthetases class I (W and Y) DOE51_RS17570 PF01370 NAD dependent epimerase/dehydratase family DOE51_RS17575 PF00570 HRDC domain DOE51_RS17575 PF09382 RQC domain DOE51_RS17575 PF16124 RecQ zinc-binding DOE51_RS17575 PF00271 Helicase conserved C-terminal domain DOE51_RS17575 PF00270 DEAD/DEAH box helicase DOE51_RS17580 PF00248 Aldo/keto reductase family DOE51_RS17605 PF08032 RNA 2'-O ribose methyltransferase substrate binding DOE51_RS17605 PF00588 SpoU rRNA Methylase family DOE51_RS17640 PF03741 Integral membrane protein TerC family DOE51_RS17660 PF00202 Aminotransferase class-III DOE51_RS17665 PF04403 Paraquat-inducible protein A DOE51_RS17670 PF02470 MlaD protein DOE51_RS17680 PF07690 Major Facilitator Superfamily DOE51_RS17690 PF02627 Carboxymuconolactone decarboxylase family DOE51_RS17715 PF00440 Bacterial regulatory proteins, tetR family DOE51_RS17720 PF00440 Bacterial regulatory proteins, tetR family DOE51_RS17755 PF01627 Hpt domain DOE51_RS17755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS17755 PF00072 Response regulator receiver domain DOE51_RS17755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOE51_RS17755 PF00672 HAMP domain DOE51_RS17755 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS17760 PF00355 Rieske [2Fe-2S] domain DOE51_RS17765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DOE51_RS17775 PF03372 Endonuclease/Exonuclease/phosphatase family DOE51_RS17780 PF05368 NmrA-like family DOE51_RS17785 PF01638 HxlR-like helix-turn-helix DOE51_RS17800 PF01451 Low molecular weight phosphotyrosine protein phosphatase DOE51_RS17825 PF04072 Leucine carboxyl methyltransferase DOE51_RS17830 PF00141 Peroxidase DOE51_RS17835 PF08241 Methyltransferase domain DOE51_RS17840 PF04542 Sigma-70 region 2 DOE51_RS17840 PF08281 Sigma-70, region 4 DOE51_RS17840 PF12680 SnoaL-like domain DOE51_RS17870 PF00581 Rhodanese-like domain DOE51_RS17875 PF04143 Sulphur transport DOE51_RS17885 PF01925 Sulfite exporter TauE/SafE DOE51_RS17890 PF00753 Metallo-beta-lactamase superfamily DOE51_RS17950 PF16859 Tetracyclin repressor-like, C-terminal domain DOE51_RS17950 PF00440 Bacterial regulatory proteins, tetR family DOE51_RS17955 PF00106 short chain dehydrogenase DOE51_RS17960 PF12852 Cupin DOE51_RS17960 PF12833 Helix-turn-helix domain DOE51_RS17965 PF01370 NAD dependent epimerase/dehydratase family DOE51_RS17995 PF00892 EamA-like transporter family DOE51_RS18030 PF01636 Phosphotransferase enzyme family DOE51_RS18040 PF03466 LysR substrate binding domain DOE51_RS18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS18060 PF00180 Isocitrate/isopropylmalate dehydrogenase DOE51_RS18080 PF01734 Patatin-like phospholipase DOE51_RS18090 PF12169 DNA polymerase III subunits gamma and tau domain III DOE51_RS18095 PF02575 YbaB/EbfC DNA-binding family DOE51_RS18100 PF13662 Toprim domain DOE51_RS18100 PF02132 RecR protein DOE51_RS18105 PF00025 ADP-ribosylation factor family DOE51_RS18110 PF02445 Quinolinate synthetase A protein DOE51_RS18140 PF10415 Fumarase C C-terminus DOE51_RS18140 PF00206 Lyase DOE51_RS18165 PF00893 Small Multidrug Resistance protein DOE51_RS18175 PF00004 ATPase family associated with various cellular activities (AAA) DOE51_RS18175 PF05362 Lon protease (S16) C-terminal proteolytic domain DOE51_RS18175 PF02190 ATP-dependent protease La (LON) substrate-binding domain DOE51_RS18180 PF02743 Cache domain DOE51_RS18180 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS18185 PF00072 Response regulator receiver domain DOE51_RS18185 PF00158 Sigma-54 interaction domain DOE51_RS18195 PF06689 ClpX C4-type zinc finger DOE51_RS18195 PF10431 C-terminal, D2-small domain, of ClpB protein DOE51_RS18195 PF07724 AAA domain (Cdc48 subfamily) DOE51_RS18200 PF00574 Clp protease DOE51_RS18205 PF02789 Cytosol aminopeptidase family, N-terminal domain DOE51_RS18205 PF00883 Cytosol aminopeptidase family, catalytic domain DOE51_RS18250 PF17886 HSP20-like domain found in ArsA DOE51_RS18250 PF02374 Anion-transporting ATPase DOE51_RS18255 PF02374 Anion-transporting ATPase DOE51_RS18260 PF05697 Bacterial trigger factor protein (TF) DOE51_RS18260 PF05698 Bacterial trigger factor protein (TF) C-terminus DOE51_RS18260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOE51_RS18270 PF00561 alpha/beta hydrolase fold DOE51_RS18280 PF13180 PDZ domain DOE51_RS18280 PF03572 Peptidase family S41 DOE51_RS18285 PF01551 Peptidase family M23 DOE51_RS18290 PF02687 FtsX-like permease family DOE51_RS18290 PF18075 FtsX extracellular domain DOE51_RS18295 PF00005 ABC transporter DOE51_RS18310 PF01741 Large-conductance mechanosensitive channel, MscL DOE51_RS18320 PF17092 Penicillin-binding protein OB-like domain DOE51_RS18320 PF00912 Transglycosylase DOE51_RS18320 PF00905 Penicillin binding protein transpeptidase domain DOE51_RS18325 PF17760 UvrA interaction domain DOE51_RS18325 PF17755 UvrA DNA-binding domain DOE51_RS18325 PF00005 ABC transporter DOE51_RS18330 PF00664 ABC transporter transmembrane region DOE51_RS18330 PF00005 ABC transporter DOE51_RS18335 PF00158 Sigma-54 interaction domain DOE51_RS18335 PF02954 Bacterial regulatory protein, Fis family DOE51_RS18335 PF01590 GAF domain DOE51_RS18345 PF01636 Phosphotransferase enzyme family DOE51_RS18350 PF00483 Nucleotidyl transferase DOE51_RS18355 PF07075 Protein of unknown function (DUF1343) DOE51_RS18380 PF00933 Glycosyl hydrolase family 3 N terminal domain DOE51_RS18380 PF01915 Glycosyl hydrolase family 3 C-terminal domain DOE51_RS18390 PF03466 LysR substrate binding domain DOE51_RS18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOE51_RS18415 PF00483 Nucleotidyl transferase DOE51_RS18425 PF18074 Primosomal protein N C-terminal domain DOE51_RS18425 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DOE51_RS18425 PF17764 3′ DNA-binding domain (3′BD) DOE51_RS18425 PF00271 Helicase conserved C-terminal domain DOE51_RS18425 PF04851 Type III restriction enzyme, res subunit DOE51_RS18440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOE51_RS18440 PF00072 Response regulator receiver domain DOE51_RS18440 PF01627 Hpt domain DOE51_RS18440 PF00512 His Kinase A (phospho-acceptor) domain DOE51_RS18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOE51_RS18440 PF00672 HAMP domain DOE51_RS18445 PF00318 Ribosomal protein S2 DOE51_RS18450 PF00889 Elongation factor TS DOE51_RS18455 PF00696 Amino acid kinase family DOE51_RS18460 PF01765 Ribosome recycling factor DOE51_RS18465 PF01255 Putative undecaprenyl diphosphate synthase DOE51_RS18475 PF02163 Peptidase family M50 DOE51_RS18480 PF00814 Glycoprotease family DOE51_RS18485 PF10609 NUBPL iron-transfer P-loop NTPase DOE51_RS18495 PF00849 RNA pseudouridylate synthase DOE51_RS18495 PF01479 S4 domain DOE51_RS18500 PF02578 Multi-copper polyphenol oxidoreductase laccase DOE51_RS18505 PF02245 Methylpurine-DNA glycosylase (MPG) DOE51_RS18525 PF01053 Cys/Met metabolism PLP-dependent enzyme DOE51_RS18530 PF00571 CBS domain DOE51_RS18530 PF00291 Pyridoxal-phosphate dependent enzyme DOE51_RS18565 PF02405 Permease MlaE DOE51_RS18570 PF02405 Permease MlaE DOE51_RS18575 PF00005 ABC transporter DOE51_RS18580 PF00005 ABC transporter DOE51_RS18585 PF00056 lactate/malate dehydrogenase, NAD binding domain DOE51_RS18585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DOE51_RS18590 PF00549 CoA-ligase DOE51_RS18590 PF08442 ATP-grasp domain DOE51_RS18595 PF02629 CoA binding domain DOE51_RS18595 PF00549 CoA-ligase DOE51_RS18625 PF00199 Catalase DOE51_RS18625 PF06628 Catalase-related immune-responsive DOE51_RS18655 PF00334 Nucleoside diphosphate kinase DOE51_RS18660 PF05958 tRNA (Uracil-5-)-methyltransferase DOE51_RS18670 PF13464 Domain of unknown function (DUF4115) DOE51_RS18685 PF00111 2Fe-2S iron-sulfur cluster binding domain DOE51_RS18690 PF14579 Helix-hairpin-helix motif DOE51_RS18690 PF02811 PHP domain DOE51_RS18690 PF14480 DNA polymerase III polC-type N-terminus I DOE51_RS18690 PF00929 Exonuclease DOE51_RS18690 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOE51_RS18690 PF11490 DNA polymerase III polC-type N-terminus II DOE51_RS18690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOE51_RS18690 PF01336 OB-fold nucleic acid binding domain DOE51_RS18695 PF02540 NAD synthase DOE51_RS18695 PF00795 Carbon-nitrogen hydrolase DOE51_RS18715 PF04055 Radical SAM superfamily DOE51_RS18715 PF18693 TRAM domain DOE51_RS18715 PF00919 Uncharacterized protein family UPF0004 DOE51_RS18720 PF03548 Outer membrane lipoprotein carrier protein LolA DOE51_RS18735 PF02590 Predicted SPOUT methyltransferase DOE51_RS18740 PF01467 Cytidylyltransferase-like DOE51_RS18745 PF01018 GTP1/OBG DOE51_RS18745 PF01926 50S ribosome-binding GTPase DOE51_RS18750 PF01016 Ribosomal L27 protein DOE51_RS18755 PF00829 Ribosomal prokaryotic L21 protein DOE51_RS18765 PF10150 Ribonuclease E/G family DOE51_RS18765 PF00575 S1 RNA binding domain DOE51_RS18770 PF00437 Type II/IV secretion system protein DOE51_RS18785 PF01791 DeoC/LacD family aldolase DOE51_RS18790 PF02885 Glycosyl transferase family, helical bundle domain DOE51_RS18790 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DOE51_RS18790 PF00591 Glycosyl transferase family, a/b domain DOE51_RS18795 PF01048 Phosphorylase superfamily DOE51_RS18800 PF00082 Subtilase family DOE51_RS18805 PF01039 Carboxyl transferase domain DOE51_RS18810 PF02785 Biotin carboxylase C-terminal domain DOE51_RS18810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOE51_RS18810 PF00289 Biotin carboxylase, N-terminal domain DOE51_RS18815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOE51_RS18815 PF00364 Biotin-requiring enzyme DOE51_RS18815 PF00682 HMGL-like DOE51_RS18815 PF02785 Biotin carboxylase C-terminal domain DOE51_RS18815 PF00289 Biotin carboxylase, N-terminal domain DOE51_RS18815 PF02436 Conserved carboxylase domain DOE51_RS18835 PF00902 Sec-independent protein translocase protein (TatC) DOE51_RS18840 PF02416 mttA/Hcf106 family DOE51_RS18860 PF05193 Peptidase M16 inactive domain DOE51_RS18860 PF00675 Insulinase (Peptidase family M16) DOE51_RS18865 PF04055 Radical SAM superfamily DOE51_RS18870 PF01025 GrpE DOE51_RS18875 PF00684 DnaJ central domain DOE51_RS18875 PF01556 DnaJ C terminal domain DOE51_RS18875 PF00226 DnaJ domain DOE51_RS18895 PF02190 ATP-dependent protease La (LON) substrate-binding domain DOE51_RS18895 PF00004 ATPase family associated with various cellular activities (AAA) DOE51_RS18895 PF05362 Lon protease (S16) C-terminal proteolytic domain DOE51_RS18930 PF00361 Proton-conducting membrane transporter DOE51_RS18935 PF00361 Proton-conducting membrane transporter DOE51_RS18935 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DOE51_RS18940 PF00361 Proton-conducting membrane transporter DOE51_RS18940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DOE51_RS18945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DOE51_RS18950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DOE51_RS18955 PF00146 NADH dehydrogenase DOE51_RS18960 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DOE51_RS18965 PF17757 UvrB interaction domain DOE51_RS18965 PF03461 TRCF domain DOE51_RS18965 PF00271 Helicase conserved C-terminal domain DOE51_RS18965 PF00270 DEAD/DEAH box helicase DOE51_RS18965 PF02559 CarD-like/TRCF domain DOE51_RS18975 PF01915 Glycosyl hydrolase family 3 C-terminal domain DOE51_RS18975 PF00933 Glycosyl hydrolase family 3 N terminal domain DOE51_RS18980 PF12826 Helix-hairpin-helix motif DOE51_RS18980 PF01541 GIY-YIG catalytic domain DOE51_RS18980 PF02151 UvrB/uvrC motif DOE51_RS18980 PF08459 UvrC Helix-hairpin-helix N-terminal DOE51_RS18985 PF13307 Helicase C-terminal domain DOE51_RS18985 PF04851 Type III restriction enzyme, res subunit DOE51_RS18985 PF00929 Exonuclease DOE51_RS18990 PF04055 Radical SAM superfamily DOE51_RS18995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DOE51_RS19000 PF02874 ATP synthase alpha/beta family, beta-barrel domain DOE51_RS19000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOE51_RS19005 PF00231 ATP synthase DOE51_RS19010 PF02874 ATP synthase alpha/beta family, beta-barrel domain DOE51_RS19010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOE51_RS19010 PF00306 ATP synthase alpha/beta chain, C terminal domain DOE51_RS19015 PF00213 ATP synthase delta (OSCP) subunit DOE51_RS19020 PF00430 ATP synthase B/B' CF(0) DOE51_RS19035 PF02195 ParB-like nuclease domain DOE51_RS19035 PF17762 HTH domain found in ParB protein DOE51_RS19050 PF02527 rRNA small subunit methyltransferase G DOE51_RS19055 PF01134 Glucose inhibited division protein A DOE51_RS19055 PF13932 GidA associated domain DOE51_RS19060 PF01926 50S ribosome-binding GTPase DOE51_RS19060 PF12631 MnmE helical domain DOE51_RS19060 PF10396 GTP-binding protein TrmE N-terminus DOE51_RS19070 PF14849 YidC periplasmic domain DOE51_RS19070 PF02096 60Kd inner membrane protein DOE51_RS19075 PF01809 Putative membrane protein insertion efficiency factor DOE51_RS19080 PF00825 Ribonuclease P DOE51_RS19085 PF00468 Ribosomal protein L34