locus-tag class description DOM22_RS00005 PF00308 Bacterial dnaA protein DOM22_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DOM22_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DOM22_RS00010 PF02767 DNA polymerase III beta subunit, central domain DOM22_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DOM22_RS00015 PF02463 RecF/RecN/SMC N terminal domain DOM22_RS00020 PF01751 Toprim domain DOM22_RS00020 PF00204 DNA gyrase B DOM22_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus DOM22_RS00020 PF18053 DNA gyrase B subunit insert domain DOM22_RS00025 PF03989 DNA gyrase C-terminal domain, beta-propeller DOM22_RS00025 PF00521 DNA gyrase/topoisomerase IV, subunit A DOM22_RS00045 PF00119 ATP synthase A chain DOM22_RS00050 PF00137 ATP synthase subunit C DOM22_RS00055 PF02875 Mur ligase family, glutamate ligase domain DOM22_RS00055 PF08245 Mur ligase middle domain DOM22_RS00060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DOM22_RS00060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DOM22_RS00060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DOM22_RS00060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DOM22_RS00065 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DOM22_RS00070 PF09312 SurA N-terminal domain DOM22_RS00070 PF00639 PPIC-type PPIASE domain DOM22_RS00075 PF00639 PPIC-type PPIASE domain DOM22_RS00075 PF09312 SurA N-terminal domain DOM22_RS00080 PF00639 PPIC-type PPIASE domain DOM22_RS00090 PF00766 Electron transfer flavoprotein FAD-binding domain DOM22_RS00090 PF01012 Electron transfer flavoprotein domain DOM22_RS00095 PF01012 Electron transfer flavoprotein domain DOM22_RS00105 PF02910 Fumarate reductase flavoprotein C-term DOM22_RS00105 PF00890 FAD binding domain DOM22_RS00120 PF00082 Subtilase family DOM22_RS00130 PF00561 alpha/beta hydrolase fold DOM22_RS00140 PF01250 Ribosomal protein S6 DOM22_RS00150 PF03948 Ribosomal protein L9, C-terminal domain DOM22_RS00150 PF01281 Ribosomal protein L9, N-terminal domain DOM22_RS00170 PF00106 short chain dehydrogenase DOM22_RS00175 PF00772 DnaB-like helicase N terminal domain DOM22_RS00175 PF03796 DnaB-like helicase C terminal domain DOM22_RS00180 PF02954 Bacterial regulatory protein, Fis family DOM22_RS00180 PF00072 Response regulator receiver domain DOM22_RS00180 PF00158 Sigma-54 interaction domain DOM22_RS00185 PF04055 Radical SAM superfamily DOM22_RS00190 PF17854 FtsK alpha domain DOM22_RS00190 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DOM22_RS00190 PF09397 Ftsk gamma domain DOM22_RS00190 PF01580 FtsK/SpoIIIE family DOM22_RS00210 PF01678 Diaminopimelate epimerase DOM22_RS00215 PF00701 Dihydrodipicolinate synthetase family DOM22_RS00220 PF05173 Dihydrodipicolinate reductase, C-terminus DOM22_RS00220 PF01113 Dihydrodipicolinate reductase, N-terminus DOM22_RS00230 PF00923 Transaldolase/Fructose-6-phosphate aldolase DOM22_RS00245 PF02875 Mur ligase family, glutamate ligase domain DOM22_RS00245 PF08245 Mur ligase middle domain DOM22_RS00260 PF00533 BRCA1 C Terminus (BRCT) domain DOM22_RS00260 PF01653 NAD-dependent DNA ligase adenylation domain DOM22_RS00260 PF03120 NAD-dependent DNA ligase OB-fold domain DOM22_RS00260 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DOM22_RS00260 PF12826 Helix-hairpin-helix motif DOM22_RS00265 PF02686 Glu-tRNAGln amidotransferase C subunit DOM22_RS00270 PF01425 Amidase DOM22_RS00275 PF02934 GatB/GatE catalytic domain DOM22_RS00275 PF02637 GatB domain DOM22_RS00280 PF01761 3-dehydroquinate synthase DOM22_RS00280 PF02541 Ppx/GppA phosphatase family DOM22_RS00300 PF07497 Rho termination factor, RNA-binding domain DOM22_RS00300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOM22_RS00300 PF07498 Rho termination factor, N-terminal domain DOM22_RS00310 PF01197 Ribosomal protein L31 DOM22_RS00315 PF03462 PCRF domain DOM22_RS00315 PF00472 RF-1 domain DOM22_RS00320 PF05175 Methyltransferase small domain DOM22_RS00320 PF17827 PrmC N-terminal domain DOM22_RS00325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DOM22_RS00350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOM22_RS00350 PF02403 Seryl-tRNA synthetase N-terminal domain DOM22_RS00370 PF09335 SNARE associated Golgi protein DOM22_RS00395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DOM22_RS00405 PF14489 QueF-like protein DOM22_RS00410 PF00311 Phosphoenolpyruvate carboxylase DOM22_RS00480 PF00551 Formyl transferase DOM22_RS00480 PF02911 Formyl transferase, C-terminal domain DOM22_RS00485 PF00501 AMP-binding enzyme DOM22_RS00485 PF13193 AMP-binding enzyme C-terminal domain DOM22_RS00495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DOM22_RS00495 PF00391 PEP-utilising enzyme, mobile domain DOM22_RS00515 PF00005 ABC transporter DOM22_RS00525 PF00202 Aminotransferase class-III DOM22_RS00530 PF16363 GDP-mannose 4,6 dehydratase DOM22_RS00570 PF00166 Chaperonin 10 Kd subunit DOM22_RS00575 PF00118 TCP-1/cpn60 chaperonin family DOM22_RS00590 PF00072 Response regulator receiver domain DOM22_RS00625 PF00437 Type II/IV secretion system protein DOM22_RS00670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS00670 PF00672 HAMP domain DOM22_RS00670 PF02203 Tar ligand binding domain homologue DOM22_RS00675 PF00156 Phosphoribosyl transferase domain DOM22_RS00685 PF13525 Outer membrane lipoprotein DOM22_RS00695 PF00202 Aminotransferase class-III DOM22_RS00700 PF07687 Peptidase dimerisation domain DOM22_RS00700 PF01546 Peptidase family M20/M25/M40 DOM22_RS00705 PF04958 Arginine N-succinyltransferase beta subunit DOM22_RS00710 PF00171 Aldehyde dehydrogenase family DOM22_RS00715 PF02618 YceG-like family DOM22_RS00725 PF00696 Amino acid kinase family DOM22_RS00725 PF01842 ACT domain DOM22_RS00735 PF00672 HAMP domain DOM22_RS00735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS00735 PF02203 Tar ligand binding domain homologue DOM22_RS00740 PF01207 Dihydrouridine synthase (Dus) DOM22_RS00745 PF03144 Elongation factor Tu domain 2 DOM22_RS00745 PF00679 Elongation factor G C-terminus DOM22_RS00745 PF14492 Elongation Factor G, domain II DOM22_RS00745 PF00009 Elongation factor Tu GTP binding domain DOM22_RS00750 PF00005 ABC transporter DOM22_RS00760 PF00912 Transglycosylase DOM22_RS00765 PF01370 NAD dependent epimerase/dehydratase family DOM22_RS00770 PF01569 PAP2 superfamily DOM22_RS00775 PF01618 MotA/TolQ/ExbB proton channel family DOM22_RS00780 PF00691 OmpA family DOM22_RS00780 PF13677 Membrane MotB of proton-channel complex MotA/MotB DOM22_RS00805 PF00085 Thioredoxin DOM22_RS00815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DOM22_RS00820 PF08335 GlnD PII-uridylyltransferase DOM22_RS00820 PF03710 Glutamate-ammonia ligase adenylyltransferase DOM22_RS00825 PF04052 TolB amino-terminal domain DOM22_RS00825 PF07676 WD40-like Beta Propeller Repeat DOM22_RS00835 PF02472 Biopolymer transport protein ExbD/TolR DOM22_RS00840 PF01618 MotA/TolQ/ExbB proton channel family DOM22_RS00855 PF01458 Uncharacterized protein family (UPF0051) DOM22_RS00860 PF00005 ABC transporter DOM22_RS00865 PF01458 Uncharacterized protein family (UPF0051) DOM22_RS00870 PF00266 Aminotransferase class-V DOM22_RS00875 PF01592 NifU-like N terminal domain DOM22_RS00875 PF04324 BFD-like [2Fe-2S] binding domain DOM22_RS00875 PF01106 NifU-like domain DOM22_RS00895 PF02601 Exonuclease VII, large subunit DOM22_RS00895 PF13742 OB-fold nucleic acid binding domain DOM22_RS00900 PF02609 Exonuclease VII small subunit DOM22_RS00905 PF00348 Polyprenyl synthetase DOM22_RS00910 PF01479 S4 domain DOM22_RS00910 PF01728 FtsJ-like methyltransferase DOM22_RS00920 PF00557 Metallopeptidase family M24 DOM22_RS00920 PF05195 Aminopeptidase P, N-terminal domain DOM22_RS00945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DOM22_RS00945 PF01266 FAD dependent oxidoreductase DOM22_RS00965 PF13426 PAS domain DOM22_RS00965 PF13188 PAS domain DOM22_RS00965 PF00989 PAS fold DOM22_RS00965 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS01000 PF04002 RadC-like JAB domain DOM22_RS01015 PF07879 PHB/PHA accumulation regulator DNA-binding domain DOM22_RS01015 PF05233 PHB accumulation regulatory domain DOM22_RS01040 PF08298 PrkA AAA domain DOM22_RS01040 PF06798 PrkA serine protein kinase C-terminal domain DOM22_RS01045 PF04285 Protein of unknown function (DUF444) DOM22_RS01050 PF04293 SpoVR like protein DOM22_RS01055 PF01253 Translation initiation factor SUI1 DOM22_RS01060 PF00072 Response regulator receiver domain DOM22_RS01060 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS01075 PF14437 MafB19-like deaminase DOM22_RS01085 PF01165 Ribosomal protein S21 DOM22_RS01090 PF09424 Yqey-like protein DOM22_RS01095 PF10410 DnaB-helicase binding domain of primase DOM22_RS01095 PF08275 DNA primase catalytic core, N-terminal domain DOM22_RS01095 PF01807 CHC2 zinc finger DOM22_RS01100 PF03979 Sigma-70 factor, region 1.1 DOM22_RS01100 PF00140 Sigma-70 factor, region 1.2 DOM22_RS01100 PF04542 Sigma-70 region 2 DOM22_RS01100 PF04539 Sigma-70 region 3 DOM22_RS01100 PF04545 Sigma-70, region 4 DOM22_RS01100 PF04546 Sigma-70, non-essential region DOM22_RS01115 PF03061 Thioesterase superfamily DOM22_RS01130 PF01584 CheW-like domain DOM22_RS01135 PF00672 HAMP domain DOM22_RS01135 PF02203 Tar ligand binding domain homologue DOM22_RS01135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS01140 PF17203 Single cache domain 3 DOM22_RS01140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS01140 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DOM22_RS01145 PF00072 Response regulator receiver domain DOM22_RS01145 PF02954 Bacterial regulatory protein, Fis family DOM22_RS01145 PF00158 Sigma-54 interaction domain DOM22_RS01160 PF00589 Phage integrase family DOM22_RS01210 PF00239 Resolvase, N terminal domain DOM22_RS01210 PF02796 Helix-turn-helix domain of resolvase DOM22_RS01250 PF00107 Zinc-binding dehydrogenase DOM22_RS01250 PF08240 Alcohol dehydrogenase GroES-like domain DOM22_RS01275 PF01597 Glycine cleavage H-protein DOM22_RS01280 PF00120 Glutamine synthetase, catalytic domain DOM22_RS01280 PF03951 Glutamine synthetase, beta-Grasp domain DOM22_RS01285 PF00543 Nitrogen regulatory protein P-II DOM22_RS01295 PF00588 SpoU rRNA Methylase family DOM22_RS01300 PF01043 SecA preprotein cross-linking domain DOM22_RS01300 PF07517 SecA DEAD-like domain DOM22_RS01300 PF07516 SecA Wing and Scaffold domain DOM22_RS01315 PF04355 SmpA / OmlA family DOM22_RS01345 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DOM22_RS01345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DOM22_RS01350 PF00115 Cytochrome C and Quinol oxidase polypeptide I DOM22_RS01350 PF00510 Cytochrome c oxidase subunit III DOM22_RS01355 PF00510 Cytochrome c oxidase subunit III DOM22_RS01365 PF01040 UbiA prenyltransferase family DOM22_RS01370 PF13417 Glutathione S-transferase, N-terminal domain DOM22_RS01390 PF00080 Copper/zinc superoxide dismutase (SODC) DOM22_RS01400 PF00158 Sigma-54 interaction domain DOM22_RS01400 PF02954 Bacterial regulatory protein, Fis family DOM22_RS01400 PF00072 Response regulator receiver domain DOM22_RS01405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOM22_RS01405 PF01627 Hpt domain DOM22_RS01405 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS01405 PF00672 HAMP domain DOM22_RS01405 PF00072 Response regulator receiver domain DOM22_RS01425 PF04209 homogentisate 1,2-dioxygenase DOM22_RS01435 PF00107 Zinc-binding dehydrogenase DOM22_RS01435 PF08240 Alcohol dehydrogenase GroES-like domain DOM22_RS01450 PF02527 rRNA small subunit methyltransferase G DOM22_RS01460 PF08534 Redoxin DOM22_RS01465 PF00271 Helicase conserved C-terminal domain DOM22_RS01465 PF00270 DEAD/DEAH box helicase DOM22_RS01470 PF04851 Type III restriction enzyme, res subunit DOM22_RS01470 PF00271 Helicase conserved C-terminal domain DOM22_RS01500 PF04072 Leucine carboxyl methyltransferase DOM22_RS01510 PF03060 Nitronate monooxygenase DOM22_RS01530 PF00962 Adenosine/AMP deaminase DOM22_RS01540 PF03960 ArsC family DOM22_RS01570 PF00117 Glutamine amidotransferase class-I DOM22_RS01570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DOM22_RS01605 PF00270 DEAD/DEAH box helicase DOM22_RS01605 PF00271 Helicase conserved C-terminal domain DOM22_RS01615 PF03601 Conserved hypothetical protein 698 DOM22_RS01620 PF00248 Aldo/keto reductase family DOM22_RS01630 PF00195 Chalcone and stilbene synthases, N-terminal domain DOM22_RS01630 PF02797 Chalcone and stilbene synthases, C-terminal domain DOM22_RS01635 PF07690 Major Facilitator Superfamily DOM22_RS01650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOM22_RS01655 PF04461 Protein of unknown function (DUF520) DOM22_RS01660 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DOM22_RS01665 PF13472 GDSL-like Lipase/Acylhydrolase family DOM22_RS01670 PF00005 ABC transporter DOM22_RS01680 PF01300 Telomere recombination DOM22_RS01680 PF03481 Putative GTP-binding controlling metal-binding DOM22_RS01690 PF01553 Acyltransferase DOM22_RS01695 PF11798 IMS family HHH motif DOM22_RS01695 PF00817 impB/mucB/samB family DOM22_RS01700 PF03960 ArsC family DOM22_RS01705 PF00491 Arginase family DOM22_RS01710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOM22_RS01715 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS01720 PF12911 N-terminal TM domain of oligopeptide transport permease C DOM22_RS01735 PF17944 Arginine decarboxylase C-terminal helical extension DOM22_RS01735 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DOM22_RS01735 PF17810 Arginine decarboxylase helical bundle domain DOM22_RS01740 PF08264 Anticodon-binding domain of tRNA DOM22_RS01740 PF09334 tRNA synthetases class I (M) DOM22_RS01740 PF13603 Leucyl-tRNA synthetase, Domain 2 DOM22_RS01740 PF00133 tRNA synthetases class I (I, L, M and V) DOM22_RS01745 PF00072 Response regulator receiver domain DOM22_RS01745 PF00990 Diguanylate cyclase, GGDEF domain DOM22_RS01750 PF01545 Cation efflux family DOM22_RS01750 PF16916 Dimerisation domain of Zinc Transporter DOM22_RS01755 PF02390 Putative methyltransferase DOM22_RS01765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM22_RS01770 PF00072 Response regulator receiver domain DOM22_RS01770 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS01785 PF00873 AcrB/AcrD/AcrF family DOM22_RS01805 PF13419 Haloacid dehalogenase-like hydrolase DOM22_RS01810 PF01389 OmpA-like transmembrane domain DOM22_RS01810 PF00691 OmpA family DOM22_RS01830 PF02811 PHP domain DOM22_RS01830 PF14579 Helix-hairpin-helix motif DOM22_RS01830 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOM22_RS01830 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOM22_RS01875 PF00456 Transketolase, thiamine diphosphate binding domain DOM22_RS01875 PF17831 Pyruvate dehydrogenase E1 component middle domain DOM22_RS01900 PF01551 Peptidase family M23 DOM22_RS01900 PF08525 Opacity-associated protein A N-terminal motif DOM22_RS01900 PF01476 LysM domain DOM22_RS01920 PF02803 Thiolase, C-terminal domain DOM22_RS01920 PF00108 Thiolase, N-terminal domain DOM22_RS01935 PF01966 HD domain DOM22_RS01940 PF00700 Bacterial flagellin C-terminal helical region DOM22_RS01940 PF00669 Bacterial flagellin N-terminal helical region DOM22_RS01945 PF00669 Bacterial flagellin N-terminal helical region DOM22_RS01945 PF00700 Bacterial flagellin C-terminal helical region DOM22_RS01960 PF03466 LysR substrate binding domain DOM22_RS01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS01965 PF03109 ABC1 family DOM22_RS01970 PF17876 Cold shock domain DOM22_RS01970 PF00575 S1 RNA binding domain DOM22_RS01970 PF08206 Ribonuclease B OB domain DOM22_RS01970 PF08461 Ribonuclease R winged-helix domain DOM22_RS01970 PF00773 RNB domain DOM22_RS01990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS02000 PF02653 Branched-chain amino acid transport system / permease component DOM22_RS02005 PF02653 Branched-chain amino acid transport system / permease component DOM22_RS02010 PF00005 ABC transporter DOM22_RS02015 PF02608 ABC transporter substrate-binding protein PnrA-like DOM22_RS02020 PF00027 Cyclic nucleotide-binding domain DOM22_RS02020 PF13545 Crp-like helix-turn-helix domain DOM22_RS02025 PF18389 TrmO C-terminal domain DOM22_RS02025 PF01980 tRNA-methyltransferase O DOM22_RS02040 PF10458 Valyl tRNA synthetase tRNA binding arm DOM22_RS02040 PF08264 Anticodon-binding domain of tRNA DOM22_RS02040 PF00133 tRNA synthetases class I (I, L, M and V) DOM22_RS02055 PF07690 Major Facilitator Superfamily DOM22_RS02065 PF02594 Uncharacterised ACR, YggU family COG1872 DOM22_RS02075 PF03807 NADP oxidoreductase coenzyme F420-dependent DOM22_RS02075 PF14748 Pyrroline-5-carboxylate reductase dimerisation DOM22_RS02080 PF01168 Alanine racemase, N-terminal domain DOM22_RS02095 PF02545 Maf-like protein DOM22_RS02120 PF16697 Inner membrane component of T3SS, cytoplasmic domain DOM22_RS02135 PF01618 MotA/TolQ/ExbB proton channel family DOM22_RS02140 PF02472 Biopolymer transport protein ExbD/TolR DOM22_RS02165 PF01066 CDP-alcohol phosphatidyltransferase DOM22_RS02170 PF02774 Semialdehyde dehydrogenase, dimerisation domain DOM22_RS02170 PF01118 Semialdehyde dehydrogenase, NAD binding domain DOM22_RS02200 PF01416 tRNA pseudouridine synthase DOM22_RS02205 PF00572 Ribosomal protein L13 DOM22_RS02210 PF00380 Ribosomal protein S9/S16 DOM22_RS02220 PF00326 Prolyl oligopeptidase family DOM22_RS02220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DOM22_RS02235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DOM22_RS02235 PF01411 tRNA synthetases class II (A) DOM22_RS02235 PF02272 DHHA1 domain DOM22_RS02245 PF00149 Calcineurin-like phosphoesterase DOM22_RS02250 PF00501 AMP-binding enzyme DOM22_RS02250 PF13193 AMP-binding enzyme C-terminal domain DOM22_RS02260 PF04608 Phosphatidylglycerophosphatase A DOM22_RS02265 PF00994 Probable molybdopterin binding domain DOM22_RS02265 PF02464 Competence-damaged protein DOM22_RS02265 PF18146 Damage-inducible protein CinA KH domain DOM22_RS02270 PF00154 recA bacterial DNA recombination protein DOM22_RS02310 PF00255 Glutathione peroxidase DOM22_RS02320 PF01842 ACT domain DOM22_RS02320 PF13840 ACT domain DOM22_RS02320 PF00696 Amino acid kinase family DOM22_RS02330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM22_RS02330 PF00460 Flagella basal body rod protein DOM22_RS02335 PF00460 Flagella basal body rod protein DOM22_RS02335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM22_RS02350 PF02119 Flagellar P-ring protein DOM22_RS02370 PF00460 Flagella basal body rod protein DOM22_RS02370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM22_RS02375 PF00669 Bacterial flagellin N-terminal helical region DOM22_RS02380 PF02599 Global regulator protein family DOM22_RS02385 PF02623 FliW protein DOM22_RS02400 PF02646 RmuC family DOM22_RS02405 PF01040 UbiA prenyltransferase family DOM22_RS02415 PF00501 AMP-binding enzyme DOM22_RS02415 PF13193 AMP-binding enzyme C-terminal domain DOM22_RS02440 PF00348 Polyprenyl synthetase DOM22_RS02450 PF04445 Putative SAM-dependent methyltransferase DOM22_RS02485 PF00285 Citrate synthase, C-terminal domain DOM22_RS02500 PF01230 HIT domain DOM22_RS02530 PF01627 Hpt domain DOM22_RS02530 PF01584 CheW-like domain DOM22_RS02530 PF02895 Signal transducing histidine kinase, homodimeric domain DOM22_RS02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS02530 PF07194 P2 response regulator binding domain DOM22_RS02540 PF00072 Response regulator receiver domain DOM22_RS02540 PF01339 CheB methylesterase DOM22_RS02545 PF00171 Aldehyde dehydrogenase family DOM22_RS02555 PF01820 D-ala D-ala ligase N-terminus DOM22_RS02555 PF07478 D-ala D-ala ligase C-terminus DOM22_RS02580 PF00730 HhH-GPD superfamily base excision DNA repair protein DOM22_RS02580 PF00633 Helix-hairpin-helix motif DOM22_RS02590 PF01547 Bacterial extracellular solute-binding protein DOM22_RS02600 PF08402 TOBE domain DOM22_RS02600 PF00005 ABC transporter DOM22_RS02625 PF09308 LuxQ, periplasmic DOM22_RS02625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS02625 PF00072 Response regulator receiver domain DOM22_RS02625 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS02635 PF00700 Bacterial flagellin C-terminal helical region DOM22_RS02635 PF00669 Bacterial flagellin N-terminal helical region DOM22_RS02650 PF00669 Bacterial flagellin N-terminal helical region DOM22_RS02650 PF00700 Bacterial flagellin C-terminal helical region DOM22_RS02660 PF07196 Flagellin hook IN motif DOM22_RS02660 PF07195 Flagellar hook-associated protein 2 C-terminus DOM22_RS02660 PF02465 Flagellar hook-associated protein 2 N-terminus DOM22_RS02665 PF02561 Flagellar protein FliS DOM22_RS02700 PF08448 PAS fold DOM22_RS02700 PF13188 PAS domain DOM22_RS02700 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS02700 PF00072 Response regulator receiver domain DOM22_RS02705 PF00072 Response regulator receiver domain DOM22_RS02715 PF01467 Cytidylyltransferase-like DOM22_RS02720 PF00155 Aminotransferase class I and II DOM22_RS02790 PF00089 Trypsin DOM22_RS02795 PF00089 Trypsin DOM22_RS02800 PF01266 FAD dependent oxidoreductase DOM22_RS02815 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DOM22_RS02815 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DOM22_RS02820 PF00355 Rieske [2Fe-2S] domain DOM22_RS02830 PF17785 PUA-like domain DOM22_RS02830 PF10672 S-adenosylmethionine-dependent methyltransferase DOM22_RS02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS02840 PF00672 HAMP domain DOM22_RS02840 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS02840 PF01627 Hpt domain DOM22_RS02840 PF00072 Response regulator receiver domain DOM22_RS02840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOM22_RS02850 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS02850 PF00072 Response regulator receiver domain DOM22_RS02890 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DOM22_RS02890 PF01522 Polysaccharide deacetylase DOM22_RS02900 PF01522 Polysaccharide deacetylase DOM22_RS02920 PF01467 Cytidylyltransferase-like DOM22_RS02920 PF00294 pfkB family carbohydrate kinase DOM22_RS02930 PF04452 RNA methyltransferase DOM22_RS02960 PF00892 EamA-like transporter family DOM22_RS02965 PF01479 S4 domain DOM22_RS02965 PF00849 RNA pseudouridylate synthase DOM22_RS03000 PF02683 Cytochrome C biogenesis protein transmembrane region DOM22_RS03000 PF11412 Disulphide bond corrector protein DsbC DOM22_RS03005 PF01618 MotA/TolQ/ExbB proton channel family DOM22_RS03010 PF13677 Membrane MotB of proton-channel complex MotA/MotB DOM22_RS03010 PF00691 OmpA family DOM22_RS03020 PF11490 DNA polymerase III polC-type N-terminus II DOM22_RS03020 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOM22_RS03020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOM22_RS03020 PF02811 PHP domain DOM22_RS03020 PF00929 Exonuclease DOM22_RS03020 PF14480 DNA polymerase III polC-type N-terminus I DOM22_RS03025 PF05362 Lon protease (S16) C-terminal proteolytic domain DOM22_RS03025 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS03025 PF02190 ATP-dependent protease La (LON) substrate-binding domain DOM22_RS03030 PF01252 Signal peptidase (SPase) II DOM22_RS03040 PF01551 Peptidase family M23 DOM22_RS03040 PF10145 Phage-related minor tail protein DOM22_RS03040 PF01464 Transglycosylase SLT domain DOM22_RS03060 PF01565 FAD binding domain DOM22_RS03060 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DOM22_RS03070 PF00186 Dihydrofolate reductase DOM22_RS03075 PF00303 Thymidylate synthase DOM22_RS03085 PF01169 Uncharacterized protein family UPF0016 DOM22_RS03090 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DOM22_RS03095 PF01176 Translation initiation factor 1A / IF-1 DOM22_RS03105 PF00156 Phosphoribosyl transferase domain DOM22_RS03120 PF01795 MraW methylase family DOM22_RS03130 PF00905 Penicillin binding protein transpeptidase domain DOM22_RS03130 PF03717 Penicillin-binding Protein dimerisation domain DOM22_RS03160 PF01225 Mur ligase family, catalytic domain DOM22_RS03160 PF02875 Mur ligase family, glutamate ligase domain DOM22_RS03160 PF08245 Mur ligase middle domain DOM22_RS03165 PF02875 Mur ligase family, glutamate ligase domain DOM22_RS03165 PF08245 Mur ligase middle domain DOM22_RS03165 PF01225 Mur ligase family, catalytic domain DOM22_RS03185 PF00953 Glycosyl transferase family 4 DOM22_RS03190 PF08245 Mur ligase middle domain DOM22_RS03190 PF02875 Mur ligase family, glutamate ligase domain DOM22_RS03200 PF01098 Cell cycle protein DOM22_RS03205 PF03033 Glycosyltransferase family 28 N-terminal domain DOM22_RS03205 PF04101 Glycosyltransferase family 28 C-terminal domain DOM22_RS03210 PF08245 Mur ligase middle domain DOM22_RS03210 PF01225 Mur ligase family, catalytic domain DOM22_RS03210 PF02875 Mur ligase family, glutamate ligase domain DOM22_RS03235 PF00672 HAMP domain DOM22_RS03235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS03235 PF02203 Tar ligand binding domain homologue DOM22_RS03245 PF02491 SHS2 domain inserted in FTSA DOM22_RS03250 PF12327 FtsZ family, C-terminal domain DOM22_RS03250 PF00091 Tubulin/FtsZ family, GTPase domain DOM22_RS03255 PF00149 Calcineurin-like phosphoesterase DOM22_RS03275 PF00694 Aconitase C-terminal domain DOM22_RS03275 PF00330 Aconitase family (aconitate hydratase) DOM22_RS03320 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DOM22_RS03320 PF00326 Prolyl oligopeptidase family DOM22_RS03335 PF02463 RecF/RecN/SMC N terminal domain DOM22_RS03340 PF01513 ATP-NAD kinase DOM22_RS03345 PF01432 Peptidase family M3 DOM22_RS03365 PF00501 AMP-binding enzyme DOM22_RS03370 PF08308 PEGA domain DOM22_RS03370 PF00069 Protein kinase domain DOM22_RS03375 PF01121 Dephospho-CoA kinase DOM22_RS03390 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DOM22_RS03420 PF13361 UvrD-like helicase C-terminal domain DOM22_RS03420 PF12705 PD-(D/E)XK nuclease superfamily DOM22_RS03420 PF00580 UvrD/REP helicase N-terminal domain DOM22_RS03425 PF00075 RNase H DOM22_RS03430 PF00106 short chain dehydrogenase DOM22_RS03445 PF00890 FAD binding domain DOM22_RS03445 PF02910 Fumarate reductase flavoprotein C-term DOM22_RS03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS03450 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS03460 PF00842 Alanine racemase, C-terminal domain DOM22_RS03460 PF01168 Alanine racemase, N-terminal domain DOM22_RS03465 PF02405 Permease MlaE DOM22_RS03470 PF00005 ABC transporter DOM22_RS03490 PF01336 OB-fold nucleic acid binding domain DOM22_RS03490 PF01966 HD domain DOM22_RS03495 PF00132 Bacterial transferase hexapeptide (six repeats) DOM22_RS03510 PF00163 Ribosomal protein S4/S9 N-terminal domain DOM22_RS03510 PF01479 S4 domain DOM22_RS03525 PF04408 Helicase associated domain (HA2) DOM22_RS03525 PF00270 DEAD/DEAH box helicase DOM22_RS03525 PF08482 ATP-dependent helicase C-terminal DOM22_RS03525 PF00271 Helicase conserved C-terminal domain DOM22_RS03530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DOM22_RS03545 PF00005 ABC transporter DOM22_RS03550 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS03570 PF00005 ABC transporter DOM22_RS03570 PF00664 ABC transporter transmembrane region DOM22_RS03575 PF00664 ABC transporter transmembrane region DOM22_RS03575 PF00005 ABC transporter DOM22_RS03600 PF00873 AcrB/AcrD/AcrF family DOM22_RS03605 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM22_RS03625 PF05114 Protein of unknown function (DUF692) DOM22_RS03630 PF04264 YceI-like domain DOM22_RS03635 PF00082 Subtilase family DOM22_RS03640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DOM22_RS03645 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DOM22_RS03645 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DOM22_RS03655 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DOM22_RS03655 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DOM22_RS03655 PF10531 SLBB domain DOM22_RS03660 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DOM22_RS03660 PF00384 Molybdopterin oxidoreductase DOM22_RS03660 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DOM22_RS03665 PF12838 4Fe-4S dicluster domain DOM22_RS03690 PF03741 Integral membrane protein TerC family DOM22_RS03695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS03695 PF03466 LysR substrate binding domain DOM22_RS03725 PF02565 Recombination protein O C terminal DOM22_RS03725 PF11967 Recombination protein O N terminal DOM22_RS03730 PF00589 Phage integrase family DOM22_RS03730 PF02899 Phage integrase, N-terminal SAM-like domain DOM22_RS03735 PF00072 Response regulator receiver domain DOM22_RS03735 PF00158 Sigma-54 interaction domain DOM22_RS03735 PF02954 Bacterial regulatory protein, Fis family DOM22_RS03755 PF00669 Bacterial flagellin N-terminal helical region DOM22_RS03755 PF00700 Bacterial flagellin C-terminal helical region DOM22_RS03765 PF17871 AAA lid domain DOM22_RS03765 PF07724 AAA domain (Cdc48 subfamily) DOM22_RS03765 PF10431 C-terminal, D2-small domain, of ClpB protein DOM22_RS03765 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS03765 PF02861 Clp amino terminal domain, pathogenicity island component DOM22_RS03775 PF07043 Protein of unknown function (DUF1328) DOM22_RS03780 PF00072 Response regulator receiver domain DOM22_RS03780 PF02954 Bacterial regulatory protein, Fis family DOM22_RS03780 PF00158 Sigma-54 interaction domain DOM22_RS03790 PF00677 Lumazine binding domain DOM22_RS03795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DOM22_RS03795 PF00925 GTP cyclohydrolase II DOM22_RS03800 PF00885 6,7-dimethyl-8-ribityllumazine synthase DOM22_RS03805 PF00989 PAS fold DOM22_RS03805 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS03805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS03805 PF00672 HAMP domain DOM22_RS03810 PF00158 Sigma-54 interaction domain DOM22_RS03810 PF02954 Bacterial regulatory protein, Fis family DOM22_RS03810 PF00072 Response regulator receiver domain DOM22_RS03815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOM22_RS03815 PF09180 Prolyl-tRNA synthetase, C-terminal DOM22_RS03815 PF03129 Anticodon binding domain DOM22_RS03825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DOM22_RS03830 PF08032 RNA 2'-O ribose methyltransferase substrate binding DOM22_RS03830 PF00588 SpoU rRNA Methylase family DOM22_RS03855 PF03144 Elongation factor Tu domain 2 DOM22_RS03855 PF03143 Elongation factor Tu C-terminal domain DOM22_RS03855 PF00009 Elongation factor Tu GTP binding domain DOM22_RS03870 PF02357 Transcription termination factor nusG DOM22_RS03870 PF00467 KOW motif DOM22_RS03875 PF00298 Ribosomal protein L11, RNA binding domain DOM22_RS03875 PF03946 Ribosomal protein L11, N-terminal domain DOM22_RS03880 PF00687 Ribosomal protein L1p/L10e family DOM22_RS03885 PF00466 Ribosomal protein L10 DOM22_RS03890 PF16320 Ribosomal protein L7/L12 dimerisation domain DOM22_RS03890 PF00542 Ribosomal protein L7/L12 C-terminal domain DOM22_RS03895 PF04560 RNA polymerase Rpb2, domain 7 DOM22_RS03895 PF00562 RNA polymerase Rpb2, domain 6 DOM22_RS03895 PF04561 RNA polymerase Rpb2, domain 2 DOM22_RS03895 PF04565 RNA polymerase Rpb2, domain 3 DOM22_RS03895 PF04563 RNA polymerase beta subunit DOM22_RS03895 PF10385 RNA polymerase beta subunit external 1 domain DOM22_RS03900 PF04998 RNA polymerase Rpb1, domain 5 DOM22_RS03900 PF04983 RNA polymerase Rpb1, domain 3 DOM22_RS03900 PF00623 RNA polymerase Rpb1, domain 2 DOM22_RS03900 PF04997 RNA polymerase Rpb1, domain 1 DOM22_RS03900 PF05000 RNA polymerase Rpb1, domain 4 DOM22_RS03905 PF00164 Ribosomal protein S12/S23 DOM22_RS03910 PF00177 Ribosomal protein S7p/S5e DOM22_RS03915 PF00679 Elongation factor G C-terminus DOM22_RS03915 PF14492 Elongation Factor G, domain II DOM22_RS03915 PF03764 Elongation factor G, domain IV DOM22_RS03915 PF00009 Elongation factor Tu GTP binding domain DOM22_RS03915 PF03144 Elongation factor Tu domain 2 DOM22_RS03920 PF00338 Ribosomal protein S10p/S20e DOM22_RS03925 PF00297 Ribosomal protein L3 DOM22_RS03930 PF00573 Ribosomal protein L4/L1 family DOM22_RS03935 PF00276 Ribosomal protein L23 DOM22_RS03940 PF00181 Ribosomal Proteins L2, RNA binding domain DOM22_RS03940 PF03947 Ribosomal Proteins L2, C-terminal domain DOM22_RS03945 PF00203 Ribosomal protein S19 DOM22_RS03950 PF00237 Ribosomal protein L22p/L17e DOM22_RS03955 PF00189 Ribosomal protein S3, C-terminal domain DOM22_RS03955 PF07650 KH domain DOM22_RS03960 PF00252 Ribosomal protein L16p/L10e DOM22_RS03965 PF00831 Ribosomal L29 protein DOM22_RS03970 PF00366 Ribosomal protein S17 DOM22_RS03975 PF00238 Ribosomal protein L14p/L23e DOM22_RS03980 PF00673 ribosomal L5P family C-terminus DOM22_RS03980 PF00281 Ribosomal protein L5 DOM22_RS03985 PF00253 Ribosomal protein S14p/S29e DOM22_RS03990 PF00410 Ribosomal protein S8 DOM22_RS03995 PF00347 Ribosomal protein L6 DOM22_RS04000 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DOM22_RS04005 PF03719 Ribosomal protein S5, C-terminal domain DOM22_RS04005 PF00333 Ribosomal protein S5, N-terminal domain DOM22_RS04010 PF00327 Ribosomal protein L30p/L7e DOM22_RS04015 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DOM22_RS04020 PF00344 SecY translocase DOM22_RS04025 PF05191 Adenylate kinase, active site lid DOM22_RS04030 PF00444 Ribosomal protein L36 DOM22_RS04035 PF00416 Ribosomal protein S13/S18 DOM22_RS04040 PF00411 Ribosomal protein S11 DOM22_RS04045 PF01479 S4 domain DOM22_RS04045 PF00163 Ribosomal protein S4/S9 N-terminal domain DOM22_RS04050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DOM22_RS04050 PF01000 RNA polymerase Rpb3/RpoA insert domain DOM22_RS04050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DOM22_RS04055 PF01196 Ribosomal protein L17 DOM22_RS04060 PF00578 AhpC/TSA family DOM22_RS04070 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOM22_RS04070 PF00072 Response regulator receiver domain DOM22_RS04070 PF01627 Hpt domain DOM22_RS04070 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS04095 PF01050 Mannose-6-phosphate isomerase DOM22_RS04095 PF00483 Nucleotidyl transferase DOM22_RS04120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOM22_RS04120 PF18158 Adaptive response protein AidB N-terminal domain DOM22_RS04120 PF02770 Acyl-CoA dehydrogenase, middle domain DOM22_RS04140 PF02203 Tar ligand binding domain homologue DOM22_RS04140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS04140 PF00672 HAMP domain DOM22_RS04160 PF16657 Maltogenic Amylase, C-terminal domain DOM22_RS04160 PF00128 Alpha amylase, catalytic domain DOM22_RS04165 PF12697 Alpha/beta hydrolase family DOM22_RS04175 PF17863 AAA lid domain DOM22_RS04175 PF07726 ATPase family associated with various cellular activities (AAA) DOM22_RS04180 PF01882 Protein of unknown function DUF58 DOM22_RS04195 PF02735 Ku70/Ku80 beta-barrel domain DOM22_RS04205 PF01351 Ribonuclease HII DOM22_RS04210 PF13298 DNA polymerase Ligase (LigD) DOM22_RS04210 PF01068 ATP dependent DNA ligase domain DOM22_RS04210 PF04679 ATP dependent DNA ligase C terminal region DOM22_RS04215 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DOM22_RS04215 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DOM22_RS04235 PF04403 Paraquat-inducible protein A DOM22_RS04240 PF00106 short chain dehydrogenase DOM22_RS04285 PF05036 Sporulation related domain DOM22_RS04285 PF03330 Lytic transglycolase DOM22_RS04290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOM22_RS04315 PF13439 Glycosyltransferase Family 4 DOM22_RS04315 PF00534 Glycosyl transferases group 1 DOM22_RS04335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DOM22_RS04355 PF03631 Virulence factor BrkB DOM22_RS04365 PF00753 Metallo-beta-lactamase superfamily DOM22_RS04380 PF02954 Bacterial regulatory protein, Fis family DOM22_RS04380 PF00072 Response regulator receiver domain DOM22_RS04380 PF00158 Sigma-54 interaction domain DOM22_RS04385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOM22_RS04385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOM22_RS04405 PF13407 Periplasmic binding protein domain DOM22_RS04410 PF02913 FAD linked oxidases, C-terminal domain DOM22_RS04410 PF01565 FAD binding domain DOM22_RS04420 PF00462 Glutaredoxin DOM22_RS04430 PF00884 Sulfatase DOM22_RS04475 PF08719 Domain of unknown function (DUF1768) DOM22_RS04495 PF12706 Beta-lactamase superfamily domain DOM22_RS04500 PF10415 Fumarase C C-terminus DOM22_RS04500 PF00206 Lyase DOM22_RS04530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DOM22_RS04540 PF00912 Transglycosylase DOM22_RS04595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS04595 PF00072 Response regulator receiver domain DOM22_RS04595 PF01627 Hpt domain DOM22_RS04595 PF00989 PAS fold DOM22_RS04595 PF18415 Histidine kinase receptor ArcB trans-membrane domain DOM22_RS04595 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS04600 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS04600 PF00072 Response regulator receiver domain DOM22_RS04600 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOM22_RS04600 PF01627 Hpt domain DOM22_RS04620 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DOM22_RS04635 PF01654 Cytochrome bd terminal oxidase subunit I DOM22_RS04645 PF04303 PrpF protein DOM22_RS04655 PF01464 Transglycosylase SLT domain DOM22_RS04655 PF14718 Soluble lytic murein transglycosylase L domain DOM22_RS04660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS04660 PF13426 PAS domain DOM22_RS04660 PF08447 PAS fold DOM22_RS04665 PF03705 CheR methyltransferase, all-alpha domain DOM22_RS04665 PF01739 CheR methyltransferase, SAM binding domain DOM22_RS04670 PF01584 CheW-like domain DOM22_RS04675 PF13533 Biotin-lipoyl like DOM22_RS04680 PF07690 Major Facilitator Superfamily DOM22_RS04735 PF01979 Amidohydrolase family DOM22_RS04740 PF03616 Sodium/glutamate symporter DOM22_RS04750 PF02321 Outer membrane efflux protein DOM22_RS04760 PF00873 AcrB/AcrD/AcrF family DOM22_RS04765 PF00873 AcrB/AcrD/AcrF family DOM22_RS04785 PF00072 Response regulator receiver domain DOM22_RS04785 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOM22_RS04785 PF01627 Hpt domain DOM22_RS04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS04785 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS04790 PF01739 CheR methyltransferase, SAM binding domain DOM22_RS04790 PF03705 CheR methyltransferase, all-alpha domain DOM22_RS04795 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS04795 PF09308 LuxQ, periplasmic DOM22_RS04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS04795 PF00072 Response regulator receiver domain DOM22_RS04815 PF00857 Isochorismatase family DOM22_RS04820 PF04287 tRNA pseudouridine synthase C DOM22_RS04820 PF00849 RNA pseudouridylate synthase DOM22_RS04845 PF02743 Cache domain DOM22_RS04845 PF00672 HAMP domain DOM22_RS04845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS04850 PF00106 short chain dehydrogenase DOM22_RS04855 PF00857 Isochorismatase family DOM22_RS04865 PF00730 HhH-GPD superfamily base excision DNA repair protein DOM22_RS04865 PF02805 Metal binding domain of Ada DOM22_RS04865 PF06029 AlkA N-terminal domain DOM22_RS04865 PF12833 Helix-turn-helix domain DOM22_RS04870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DOM22_RS04870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DOM22_RS04885 PF00149 Calcineurin-like phosphoesterase DOM22_RS04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS04915 PF03466 LysR substrate binding domain DOM22_RS04920 PF00107 Zinc-binding dehydrogenase DOM22_RS04920 PF08240 Alcohol dehydrogenase GroES-like domain DOM22_RS04925 PF00248 Aldo/keto reductase family DOM22_RS04935 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DOM22_RS04940 PF00999 Sodium/hydrogen exchanger family DOM22_RS04980 PF00698 Acyl transferase domain DOM22_RS04990 PF13614 AAA domain DOM22_RS05010 PF00582 Universal stress protein family DOM22_RS05030 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS05030 PF18698 Histidine kinase sensor domain DOM22_RS05030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS05030 PF00672 HAMP domain DOM22_RS05030 PF00989 PAS fold DOM22_RS05035 PF00690 Cation transporter/ATPase, N-terminus DOM22_RS05035 PF00689 Cation transporting ATPase, C-terminus DOM22_RS05040 PF00158 Sigma-54 interaction domain DOM22_RS05040 PF01590 GAF domain DOM22_RS05045 PF00011 Hsp20/alpha crystallin family DOM22_RS05060 PF00005 ABC transporter DOM22_RS05065 PF00156 Phosphoribosyl transferase domain DOM22_RS05065 PF01738 Dienelactone hydrolase family DOM22_RS05075 PF10996 Beta-Casp domain DOM22_RS05075 PF00753 Metallo-beta-lactamase superfamily DOM22_RS05075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DOM22_RS05085 PF12900 Pyridoxamine 5'-phosphate oxidase DOM22_RS05095 PF00294 pfkB family carbohydrate kinase DOM22_RS05100 PF08212 Lipocalin-like domain DOM22_RS05105 PF08212 Lipocalin-like domain DOM22_RS05160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOM22_RS05160 PF00672 HAMP domain DOM22_RS05160 PF01627 Hpt domain DOM22_RS05160 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS05160 PF00072 Response regulator receiver domain DOM22_RS05165 PF06745 KaiC DOM22_RS05170 PF10011 Predicted membrane protein (DUF2254) DOM22_RS05215 PF00589 Phage integrase family DOM22_RS05215 PF02899 Phage integrase, N-terminal SAM-like domain DOM22_RS05305 PF00271 Helicase conserved C-terminal domain DOM22_RS05305 PF00176 SNF2 family N-terminal domain DOM22_RS05320 PF17746 SfsA N-terminal OB domain DOM22_RS05320 PF03749 Sugar fermentation stimulation protein RE domain DOM22_RS05360 PF00873 AcrB/AcrD/AcrF family DOM22_RS05365 PF02583 Metal-sensitive transcriptional repressor DOM22_RS05370 PF00403 Heavy-metal-associated domain DOM22_RS05385 PF07508 Recombinase DOM22_RS05385 PF13408 Recombinase zinc beta ribbon domain DOM22_RS05385 PF00239 Resolvase, N terminal domain DOM22_RS05390 PF01451 Low molecular weight phosphotyrosine protein phosphatase DOM22_RS05395 PF03358 NADPH-dependent FMN reductase DOM22_RS05400 PF01758 Sodium Bile acid symporter family DOM22_RS05405 PF00376 MerR family regulatory protein DOM22_RS05405 PF09278 MerR, DNA binding DOM22_RS05420 PF01022 Bacterial regulatory protein, arsR family DOM22_RS05445 PF00873 AcrB/AcrD/AcrF family DOM22_RS05450 PF00403 Heavy-metal-associated domain DOM22_RS05465 PF00873 AcrB/AcrD/AcrF family DOM22_RS05490 PF00873 AcrB/AcrD/AcrF family DOM22_RS05540 PF04945 YHS domain DOM22_RS05555 PF00403 Heavy-metal-associated domain DOM22_RS05560 PF09278 MerR, DNA binding DOM22_RS05560 PF00376 MerR family regulatory protein DOM22_RS05655 PF07508 Recombinase DOM22_RS05655 PF00239 Resolvase, N terminal domain DOM22_RS05655 PF13408 Recombinase zinc beta ribbon domain DOM22_RS05665 PF04026 SpoVG DOM22_RS05675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS05675 PF00672 HAMP domain DOM22_RS05675 PF02203 Tar ligand binding domain homologue DOM22_RS05690 PF13180 PDZ domain DOM22_RS05700 PF01435 Peptidase family M48 DOM22_RS05705 PF17863 AAA lid domain DOM22_RS05705 PF07726 ATPase family associated with various cellular activities (AAA) DOM22_RS05725 PF13519 von Willebrand factor type A domain DOM22_RS05725 PF07584 Aerotolerance regulator N-terminal DOM22_RS05760 PF02146 Sir2 family DOM22_RS05765 PF00694 Aconitase C-terminal domain DOM22_RS05765 PF00330 Aconitase family (aconitate hydratase) DOM22_RS05785 PF04304 Protein of unknown function (DUF454) DOM22_RS05800 PF09587 Bacterial capsule synthesis protein PGA_cap DOM22_RS05835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOM22_RS05840 PF00691 OmpA family DOM22_RS05860 PF03741 Integral membrane protein TerC family DOM22_RS05890 PF00672 HAMP domain DOM22_RS05890 PF02203 Tar ligand binding domain homologue DOM22_RS05890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS05905 PF03099 Biotin/lipoate A/B protein ligase family DOM22_RS05905 PF08279 HTH domain DOM22_RS05905 PF02237 Biotin protein ligase C terminal domain DOM22_RS05910 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DOM22_RS05910 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DOM22_RS05915 PF01584 CheW-like domain DOM22_RS05915 PF00072 Response regulator receiver domain DOM22_RS05925 PF01327 Polypeptide deformylase DOM22_RS05930 PF02911 Formyl transferase, C-terminal domain DOM22_RS05930 PF00551 Formyl transferase DOM22_RS05935 PF00834 Ribulose-phosphate 3 epimerase family DOM22_RS05945 PF00293 NUDIX domain DOM22_RS05955 PF00221 Aromatic amino acid lyase DOM22_RS05975 PF09008 Head binding DOM22_RS05990 PF17391 Urocanase N-terminal domain DOM22_RS05990 PF01175 Urocanase Rossmann-like domain DOM22_RS05990 PF17392 Urocanase C-terminal domain DOM22_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS06005 PF00005 ABC transporter DOM22_RS06065 PF01820 D-ala D-ala ligase N-terminus DOM22_RS06065 PF07478 D-ala D-ala ligase C-terminus DOM22_RS06095 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM22_RS06095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOM22_RS06100 PF03551 Transcriptional regulator PadR-like family DOM22_RS06120 PF00106 short chain dehydrogenase DOM22_RS06130 PF03466 LysR substrate binding domain DOM22_RS06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS06140 PF02817 e3 binding domain DOM22_RS06140 PF00364 Biotin-requiring enzyme DOM22_RS06140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DOM22_RS06145 PF00676 Dehydrogenase E1 component DOM22_RS06145 PF16078 2-oxoglutarate dehydrogenase N-terminus DOM22_RS06145 PF16870 2-oxoglutarate dehydrogenase C-terminal DOM22_RS06145 PF02779 Transketolase, pyrimidine binding domain DOM22_RS06150 PF00300 Histidine phosphatase superfamily (branch 1) DOM22_RS06155 PF00011 Hsp20/alpha crystallin family DOM22_RS06170 PF12464 Maltose acetyltransferase DOM22_RS06170 PF14602 Hexapeptide repeat of succinyl-transferase DOM22_RS06175 PF01979 Amidohydrolase family DOM22_RS06195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DOM22_RS06195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DOM22_RS06205 PF01566 Natural resistance-associated macrophage protein DOM22_RS06220 PF18073 Rubredoxin metal binding domain DOM22_RS06225 PF01464 Transglycosylase SLT domain DOM22_RS06225 PF14718 Soluble lytic murein transglycosylase L domain DOM22_RS06230 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS06235 PF12911 N-terminal TM domain of oligopeptide transport permease C DOM22_RS06235 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS06245 PF03502 Nucleoside-specific channel-forming protein, Tsx DOM22_RS06250 PF06071 Protein of unknown function (DUF933) DOM22_RS06250 PF01926 50S ribosome-binding GTPase DOM22_RS06255 PF01195 Peptidyl-tRNA hydrolase DOM22_RS06260 PF14693 Ribosomal protein TL5, C-terminal domain DOM22_RS06260 PF01386 Ribosomal L25p family DOM22_RS06265 PF14572 Phosphoribosyl synthetase-associated domain DOM22_RS06265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DOM22_RS06275 PF01725 Ham1 family DOM22_RS06280 PF03725 3' exoribonuclease family, domain 2 DOM22_RS06280 PF01138 3' exoribonuclease family, domain 1 DOM22_RS06285 PF01520 N-acetylmuramoyl-L-alanine amidase DOM22_RS06285 PF11741 AMIN domain DOM22_RS06300 PF00574 Clp protease DOM22_RS06305 PF00924 Mechanosensitive ion channel DOM22_RS06310 PF02673 Bacitracin resistance protein BacA DOM22_RS06315 PF00082 Subtilase family DOM22_RS06325 PF00378 Enoyl-CoA hydratase/isomerase DOM22_RS06340 PF04279 Intracellular septation protein A DOM22_RS06345 PF01979 Amidohydrolase family DOM22_RS06365 PF07681 DoxX DOM22_RS06375 PF03193 RsgA GTPase DOM22_RS06385 PF00115 Cytochrome C and Quinol oxidase polypeptide I DOM22_RS06390 PF07732 Multicopper oxidase DOM22_RS06395 PF03781 Sulfatase-modifying factor enzyme 1 DOM22_RS06435 PF13545 Crp-like helix-turn-helix domain DOM22_RS06435 PF00027 Cyclic nucleotide-binding domain DOM22_RS06450 PF13302 Acetyltransferase (GNAT) domain DOM22_RS06500 PF01145 SPFH domain / Band 7 family DOM22_RS06530 PF07690 Major Facilitator Superfamily DOM22_RS06535 PF01872 RibD C-terminal domain DOM22_RS06550 PF00672 HAMP domain DOM22_RS06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS06550 PF18698 Histidine kinase sensor domain DOM22_RS06550 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS06550 PF00989 PAS fold DOM22_RS06555 PF00072 Response regulator receiver domain DOM22_RS06555 PF00196 Bacterial regulatory proteins, luxR family DOM22_RS06580 PF05987 Bacterial protein of unknown function (DUF898) DOM22_RS06585 PF01435 Peptidase family M48 DOM22_RS06590 PF06224 Winged helix DNA-binding domain DOM22_RS06620 PF00043 Glutathione S-transferase, C-terminal domain DOM22_RS06620 PF13417 Glutathione S-transferase, N-terminal domain DOM22_RS06625 PF00375 Sodium:dicarboxylate symporter family DOM22_RS06680 PF00296 Luciferase-like monooxygenase DOM22_RS06685 PF00958 GMP synthase C terminal domain DOM22_RS06685 PF00117 Glutamine amidotransferase class-I DOM22_RS06685 PF13673 Acetyltransferase (GNAT) domain DOM22_RS06685 PF03352 Methyladenine glycosylase DOM22_RS06685 PF13302 Acetyltransferase (GNAT) domain DOM22_RS06710 PF00132 Bacterial transferase hexapeptide (six repeats) DOM22_RS06735 PF00012 Hsp70 protein DOM22_RS06740 PF13545 Crp-like helix-turn-helix domain DOM22_RS06740 PF00027 Cyclic nucleotide-binding domain DOM22_RS06745 PF00753 Metallo-beta-lactamase superfamily DOM22_RS06750 PF00581 Rhodanese-like domain DOM22_RS06755 PF04143 Sulphur transport DOM22_RS06765 PF01925 Sulfite exporter TauE/SafE DOM22_RS06770 PF16177 Acetyl-coenzyme A synthetase N-terminus DOM22_RS06770 PF13193 AMP-binding enzyme C-terminal domain DOM22_RS06770 PF00501 AMP-binding enzyme DOM22_RS06780 PF01207 Dihydrouridine synthase (Dus) DOM22_RS06825 PF00529 HlyD membrane-fusion protein of T1SS DOM22_RS06825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DOM22_RS06830 PF12704 MacB-like periplasmic core domain DOM22_RS06830 PF02687 FtsX-like permease family DOM22_RS06830 PF00005 ABC transporter DOM22_RS06835 PF01207 Dihydrouridine synthase (Dus) DOM22_RS06845 PF02810 SEC-C motif DOM22_RS06850 PF00106 short chain dehydrogenase DOM22_RS06855 PF00206 Lyase DOM22_RS06855 PF10415 Fumarase C C-terminus DOM22_RS06870 PF00580 UvrD/REP helicase N-terminal domain DOM22_RS06870 PF13361 UvrD-like helicase C-terminal domain DOM22_RS06875 PF00849 RNA pseudouridylate synthase DOM22_RS06895 PF01722 BolA-like protein DOM22_RS06910 PF00005 ABC transporter DOM22_RS06910 PF12848 ABC transporter DOM22_RS06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS06915 PF09308 LuxQ, periplasmic DOM22_RS06915 PF00072 Response regulator receiver domain DOM22_RS06915 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS06930 PF00557 Metallopeptidase family M24 DOM22_RS06935 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DOM22_RS06935 PF05221 S-adenosyl-L-homocysteine hydrolase DOM22_RS06965 PF05532 CsbD-like DOM22_RS06975 PF00072 Response regulator receiver domain DOM22_RS06975 PF02954 Bacterial regulatory protein, Fis family DOM22_RS06975 PF00158 Sigma-54 interaction domain DOM22_RS06990 PF00929 Exonuclease DOM22_RS06995 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS06995 PF00072 Response regulator receiver domain DOM22_RS07020 PF08007 Cupin superfamily protein DOM22_RS07030 PF00255 Glutathione peroxidase DOM22_RS07040 PF05199 GMC oxidoreductase DOM22_RS07055 PF00072 Response regulator receiver domain DOM22_RS07055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS07055 PF18415 Histidine kinase receptor ArcB trans-membrane domain DOM22_RS07055 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS07055 PF00989 PAS fold DOM22_RS07055 PF01627 Hpt domain DOM22_RS07075 PF02896 PEP-utilising enzyme, TIM barrel domain DOM22_RS07075 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DOM22_RS07075 PF00391 PEP-utilising enzyme, mobile domain DOM22_RS07085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DOM22_RS07085 PF00056 lactate/malate dehydrogenase, NAD binding domain DOM22_RS07090 PF00069 Protein kinase domain DOM22_RS07090 PF08308 PEGA domain DOM22_RS07105 PF01546 Peptidase family M20/M25/M40 DOM22_RS07105 PF07687 Peptidase dimerisation domain DOM22_RS07115 PF00082 Subtilase family DOM22_RS07115 PF05922 Peptidase inhibitor I9 DOM22_RS07140 PF00942 Cellulose binding domain DOM22_RS07140 PF12891 Glycoside hydrolase family 44 DOM22_RS07140 PF00150 Cellulase (glycosyl hydrolase family 5) DOM22_RS07145 PF01641 SelR domain DOM22_RS07155 PF03976 Polyphosphate kinase 2 (PPK2) DOM22_RS07165 PF00672 HAMP domain DOM22_RS07165 PF02203 Tar ligand binding domain homologue DOM22_RS07165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS07195 PF04972 BON domain DOM22_RS07195 PF00691 OmpA family DOM22_RS07210 PF17785 PUA-like domain DOM22_RS07210 PF10672 S-adenosylmethionine-dependent methyltransferase DOM22_RS07220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS07220 PF02203 Tar ligand binding domain homologue DOM22_RS07220 PF00672 HAMP domain DOM22_RS07225 PF16325 Peptidase family U32 C-terminal domain DOM22_RS07225 PF01136 Peptidase family U32 DOM22_RS07235 PF00672 HAMP domain DOM22_RS07235 PF02203 Tar ligand binding domain homologue DOM22_RS07235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS07240 PF00270 DEAD/DEAH box helicase DOM22_RS07240 PF00271 Helicase conserved C-terminal domain DOM22_RS07250 PF00857 Isochorismatase family DOM22_RS07260 PF14760 Rnk N-terminus DOM22_RS07260 PF01272 Transcription elongation factor, GreA/GreB, C-term DOM22_RS07275 PF01625 Peptide methionine sulfoxide reductase DOM22_RS07305 PF03734 L,D-transpeptidase catalytic domain DOM22_RS07325 PF12891 Glycoside hydrolase family 44 DOM22_RS07325 PF00942 Cellulose binding domain DOM22_RS07325 PF00150 Cellulase (glycosyl hydrolase family 5) DOM22_RS07350 PF03949 Malic enzyme, NAD binding domain DOM22_RS07350 PF00390 Malic enzyme, N-terminal domain DOM22_RS07360 PF01053 Cys/Met metabolism PLP-dependent enzyme DOM22_RS07370 PF14864 Alkyl sulfatase C-terminal DOM22_RS07370 PF00753 Metallo-beta-lactamase superfamily DOM22_RS07370 PF14863 Alkyl sulfatase dimerisation DOM22_RS07375 PF04434 SWIM zinc finger DOM22_RS07375 PF00271 Helicase conserved C-terminal domain DOM22_RS07375 PF00176 SNF2 family N-terminal domain DOM22_RS07380 PF03880 DbpA RNA binding domain DOM22_RS07380 PF00271 Helicase conserved C-terminal domain DOM22_RS07380 PF00270 DEAD/DEAH box helicase DOM22_RS07395 PF03099 Biotin/lipoate A/B protein ligase family DOM22_RS07395 PF10437 Bacterial lipoate protein ligase C-terminus DOM22_RS07465 PF00271 Helicase conserved C-terminal domain DOM22_RS07465 PF00270 DEAD/DEAH box helicase DOM22_RS07470 PF12848 ABC transporter DOM22_RS07470 PF16326 ABC transporter C-terminal domain DOM22_RS07470 PF00005 ABC transporter DOM22_RS07485 PF11700 Vacuole effluxer Atg22 like DOM22_RS07495 PF01728 FtsJ-like methyltransferase DOM22_RS07500 PF01479 S4 domain DOM22_RS07500 PF00849 RNA pseudouridylate synthase DOM22_RS07525 PF01966 HD domain DOM22_RS07545 PF00082 Subtilase family DOM22_RS07555 PF13185 GAF domain DOM22_RS07560 PF00072 Response regulator receiver domain DOM22_RS07560 PF00990 Diguanylate cyclase, GGDEF domain DOM22_RS07565 PF14759 Reductase C-terminal DOM22_RS07565 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM22_RS07570 PF03976 Polyphosphate kinase 2 (PPK2) DOM22_RS07575 PF02566 OsmC-like protein DOM22_RS07580 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS07580 PF07724 AAA domain (Cdc48 subfamily) DOM22_RS07580 PF10431 C-terminal, D2-small domain, of ClpB protein DOM22_RS07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS07585 PF13426 PAS domain DOM22_RS07585 PF00672 HAMP domain DOM22_RS07585 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS07600 PF00672 HAMP domain DOM22_RS07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS07600 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS07600 PF00989 PAS fold DOM22_RS07605 PF00072 Response regulator receiver domain DOM22_RS07610 PF00072 Response regulator receiver domain DOM22_RS07610 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOM22_RS07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS07610 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS07615 PF18415 Histidine kinase receptor ArcB trans-membrane domain DOM22_RS07615 PF01627 Hpt domain DOM22_RS07615 PF00989 PAS fold DOM22_RS07615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS07615 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS07615 PF00072 Response regulator receiver domain DOM22_RS07620 PF01914 MarC family integral membrane protein DOM22_RS07625 PF13382 Adenine deaminase C-terminal domain DOM22_RS07625 PF01979 Amidohydrolase family DOM22_RS07640 PF00561 alpha/beta hydrolase fold DOM22_RS07670 PF00709 Adenylosuccinate synthetase DOM22_RS07675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOM22_RS07675 PF01842 ACT domain DOM22_RS07675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOM22_RS07680 PF00266 Aminotransferase class-V DOM22_RS07690 PF06144 DNA polymerase III, delta subunit DOM22_RS07710 PF01649 Ribosomal protein S20 DOM22_RS07715 PF03023 Lipid II flippase MurJ DOM22_RS07720 PF00672 HAMP domain DOM22_RS07720 PF02203 Tar ligand binding domain homologue DOM22_RS07720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS07725 PF00672 HAMP domain DOM22_RS07725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS07725 PF02203 Tar ligand binding domain homologue DOM22_RS07730 PF00672 HAMP domain DOM22_RS07730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS07775 PF01618 MotA/TolQ/ExbB proton channel family DOM22_RS07795 PF03819 MazG nucleotide pyrophosphohydrolase domain DOM22_RS07800 PF07697 7TM-HD extracellular DOM22_RS07800 PF07698 7TM receptor with intracellular HD hydrolase DOM22_RS07800 PF01966 HD domain DOM22_RS07805 PF02130 Uncharacterized protein family UPF0054 DOM22_RS07810 PF03462 PCRF domain DOM22_RS07810 PF00472 RF-1 domain DOM22_RS07815 PF02687 FtsX-like permease family DOM22_RS07815 PF12704 MacB-like periplasmic core domain DOM22_RS07820 PF00005 ABC transporter DOM22_RS07825 PF00089 Trypsin DOM22_RS07830 PF07244 Surface antigen variable number repeat DOM22_RS07830 PF01103 Surface antigen DOM22_RS07840 PF00132 Bacterial transferase hexapeptide (six repeats) DOM22_RS07840 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DOM22_RS07850 PF02684 Lipid-A-disaccharide synthetase DOM22_RS07855 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DOM22_RS07860 PF03279 Bacterial lipid A biosynthesis acyltransferase DOM22_RS07885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DOM22_RS07890 PF02954 Bacterial regulatory protein, Fis family DOM22_RS07890 PF00158 Sigma-54 interaction domain DOM22_RS07890 PF00072 Response regulator receiver domain DOM22_RS07895 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS07900 PF06574 FAD synthetase DOM22_RS07900 PF01687 Riboflavin kinase DOM22_RS07910 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DOM22_RS07910 PF00437 Type II/IV secretion system protein DOM22_RS07920 PF00482 Type II secretion system (T2SS), protein F DOM22_RS07925 PF00989 PAS fold DOM22_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS07925 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS07930 PF00158 Sigma-54 interaction domain DOM22_RS07930 PF02954 Bacterial regulatory protein, Fis family DOM22_RS07930 PF00072 Response regulator receiver domain DOM22_RS07945 PF01738 Dienelactone hydrolase family DOM22_RS07985 PF05922 Peptidase inhibitor I9 DOM22_RS07985 PF00082 Subtilase family DOM22_RS08000 PF00849 RNA pseudouridylate synthase DOM22_RS08085 PF17384 RimP C-terminal SH3 domain DOM22_RS08085 PF02576 RimP N-terminal domain DOM22_RS08090 PF13184 NusA-like KH domain DOM22_RS08090 PF08529 NusA N-terminal domain DOM22_RS08090 PF00575 S1 RNA binding domain DOM22_RS08095 PF11987 Translation-initiation factor 2 DOM22_RS08095 PF04760 Translation initiation factor IF-2, N-terminal region DOM22_RS08095 PF00009 Elongation factor Tu GTP binding domain DOM22_RS08100 PF02033 Ribosome-binding factor A DOM22_RS08105 PF16198 tRNA pseudouridylate synthase B C-terminal domain DOM22_RS08105 PF01509 TruB family pseudouridylate synthase (N terminal domain) DOM22_RS08110 PF00312 Ribosomal protein S15 DOM22_RS08115 PF03725 3' exoribonuclease family, domain 2 DOM22_RS08115 PF00575 S1 RNA binding domain DOM22_RS08115 PF01138 3' exoribonuclease family, domain 1 DOM22_RS08115 PF00013 KH domain DOM22_RS08115 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DOM22_RS08120 PF00675 Insulinase (Peptidase family M16) DOM22_RS08120 PF05193 Peptidase M16 inactive domain DOM22_RS08125 PF00692 dUTPase DOM22_RS08155 PF00535 Glycosyl transferase family 2 DOM22_RS08170 PF08676 MutL C terminal dimerisation domain DOM22_RS08170 PF01119 DNA mismatch repair protein, C-terminal domain DOM22_RS08180 PF03755 YicC-like family, N-terminal region DOM22_RS08180 PF08340 Domain of unknown function (DUF1732) DOM22_RS08185 PF00625 Guanylate kinase DOM22_RS08190 PF01192 RNA polymerase Rpb6 DOM22_RS08195 PF13291 ACT domain DOM22_RS08195 PF04607 Region found in RelA / SpoT proteins DOM22_RS08195 PF02824 TGS domain DOM22_RS08200 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS08200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS08200 PF00989 PAS fold DOM22_RS08220 PF00436 Single-strand binding protein family DOM22_RS08260 PF08334 Type II secretion system (T2SS), protein G DOM22_RS08265 PF00482 Type II secretion system (T2SS), protein F DOM22_RS08270 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DOM22_RS08270 PF00437 Type II/IV secretion system protein DOM22_RS08275 PF03958 Bacterial type II/III secretion system short domain DOM22_RS08275 PF00263 Bacterial type II and III secretion system protein DOM22_RS08305 PF00156 Phosphoribosyl transferase domain DOM22_RS08310 PF00731 AIR carboxylase DOM22_RS08320 PF02844 Phosphoribosylglycinamide synthetase, N domain DOM22_RS08320 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DOM22_RS08320 PF02843 Phosphoribosylglycinamide synthetase, C domain DOM22_RS08325 PF00551 Formyl transferase DOM22_RS08330 PF00586 AIR synthase related protein, N-terminal domain DOM22_RS08330 PF02769 AIR synthase related protein, C-terminal domain DOM22_RS08330 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DOM22_RS08340 PF02142 MGS-like domain DOM22_RS08340 PF01808 AICARFT/IMPCHase bienzyme DOM22_RS08345 PF02769 AIR synthase related protein, C-terminal domain DOM22_RS08345 PF00586 AIR synthase related protein, N-terminal domain DOM22_RS08355 PF02954 Bacterial regulatory protein, Fis family DOM22_RS08355 PF00158 Sigma-54 interaction domain DOM22_RS08355 PF00072 Response regulator receiver domain DOM22_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS08360 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS08380 PF01923 Cobalamin adenosyltransferase DOM22_RS08390 PF01578 Cytochrome C assembly protein DOM22_RS08390 PF05140 ResB-like family DOM22_RS08395 PF05140 ResB-like family DOM22_RS08395 PF01578 Cytochrome C assembly protein DOM22_RS08405 PF00037 4Fe-4S binding domain DOM22_RS08405 PF13247 4Fe-4S dicluster domain DOM22_RS08445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DOM22_RS08445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOM22_RS08445 PF02824 TGS domain DOM22_RS08445 PF03129 Anticodon binding domain DOM22_RS08450 PF05198 Translation initiation factor IF-3, N-terminal domain DOM22_RS08450 PF00707 Translation initiation factor IF-3, C-terminal domain DOM22_RS08460 PF02627 Carboxymuconolactone decarboxylase family DOM22_RS08475 PF01022 Bacterial regulatory protein, arsR family DOM22_RS08485 PF01593 Flavin containing amine oxidoreductase DOM22_RS08490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOM22_RS08490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOM22_RS08495 PF00893 Small Multidrug Resistance protein DOM22_RS08500 PF03009 Glycerophosphoryl diester phosphodiesterase family DOM22_RS08505 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DOM22_RS08505 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DOM22_RS08525 PF01632 Ribosomal protein L35 DOM22_RS08530 PF00453 Ribosomal protein L20 DOM22_RS08535 PF01070 FMN-dependent dehydrogenase DOM22_RS08540 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DOM22_RS08570 PF00005 ABC transporter DOM22_RS08590 PF00892 EamA-like transporter family DOM22_RS08625 PF08447 PAS fold DOM22_RS08625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS08630 PF00588 SpoU rRNA Methylase family DOM22_RS08630 PF02527 rRNA small subunit methyltransferase G DOM22_RS08635 PF02527 rRNA small subunit methyltransferase G DOM22_RS08645 PF02667 Short chain fatty acid transporter DOM22_RS08655 PF01409 tRNA synthetases class II core domain (F) DOM22_RS08655 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DOM22_RS08660 PF03483 B3/4 domain DOM22_RS08660 PF03147 Ferredoxin-fold anticodon binding domain DOM22_RS08660 PF03484 tRNA synthetase B5 domain DOM22_RS08660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DOM22_RS08660 PF01588 Putative tRNA binding domain DOM22_RS08665 PF00216 Bacterial DNA-binding protein DOM22_RS08675 PF00892 EamA-like transporter family DOM22_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS08700 PF00072 Response regulator receiver domain DOM22_RS08700 PF09308 LuxQ, periplasmic DOM22_RS08700 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS08705 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS08705 PF00072 Response regulator receiver domain DOM22_RS08705 PF09308 LuxQ, periplasmic DOM22_RS08740 PF00583 Acetyltransferase (GNAT) family DOM22_RS08745 PF01638 HxlR-like helix-turn-helix DOM22_RS08765 PF00793 DAHP synthetase I family DOM22_RS08800 PF06594 Haemolysin-type calcium binding protein related domain DOM22_RS08800 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DOM22_RS08840 PF02547 Queuosine biosynthesis protein DOM22_RS08845 PF01702 Queuine tRNA-ribosyltransferase DOM22_RS08850 PF02699 Preprotein translocase subunit DOM22_RS08855 PF02355 Protein export membrane protein DOM22_RS08855 PF07549 SecD/SecF GG Motif DOM22_RS08860 PF07549 SecD/SecF GG Motif DOM22_RS08860 PF02355 Protein export membrane protein DOM22_RS08865 PF01368 DHH family DOM22_RS08865 PF02272 DHHA1 domain DOM22_RS08865 PF17768 RecJ OB domain DOM22_RS08870 PF06508 Queuosine biosynthesis protein QueC DOM22_RS08890 PF00403 Heavy-metal-associated domain DOM22_RS08905 PF02690 Na+/Pi-cotransporter DOM22_RS08910 PF00293 NUDIX domain DOM22_RS08920 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS08920 PF05362 Lon protease (S16) C-terminal proteolytic domain DOM22_RS08920 PF02190 ATP-dependent protease La (LON) substrate-binding domain DOM22_RS08925 PF02628 Cytochrome oxidase assembly protein DOM22_RS08925 PF01040 UbiA prenyltransferase family DOM22_RS08930 PF01545 Cation efflux family DOM22_RS08930 PF16916 Dimerisation domain of Zinc Transporter DOM22_RS08975 PF00578 AhpC/TSA family DOM22_RS08980 PF03109 ABC1 family DOM22_RS08985 PF00875 DNA photolyase DOM22_RS08985 PF03441 FAD binding domain of DNA photolyase DOM22_RS08990 PF01370 NAD dependent epimerase/dehydratase family DOM22_RS08990 PF08338 Domain of unknown function (DUF1731) DOM22_RS08995 PF01979 Amidohydrolase family DOM22_RS08995 PF13382 Adenine deaminase C-terminal domain DOM22_RS09005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DOM22_RS09005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DOM22_RS09010 PF00941 FAD binding domain in molybdopterin dehydrogenase DOM22_RS09010 PF03450 CO dehydrogenase flavoprotein C-terminal domain DOM22_RS09025 PF01475 Ferric uptake regulator family DOM22_RS09035 PF00300 Histidine phosphatase superfamily (branch 1) DOM22_RS09040 PF00072 Response regulator receiver domain DOM22_RS09040 PF13188 PAS domain DOM22_RS09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS09040 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS09040 PF08448 PAS fold DOM22_RS09045 PF12849 PBP superfamily domain DOM22_RS09050 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS09055 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS09060 PF00005 ABC transporter DOM22_RS09075 PF13632 Glycosyl transferase family group 2 DOM22_RS09075 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DOM22_RS09090 PF16363 GDP-mannose 4,6 dehydratase DOM22_RS09095 PF00535 Glycosyl transferase family 2 DOM22_RS09100 PF01757 Acyltransferase family DOM22_RS09115 PF16363 GDP-mannose 4,6 dehydratase DOM22_RS09120 PF00483 Nucleotidyl transferase DOM22_RS09145 PF00106 short chain dehydrogenase DOM22_RS09150 PF01565 FAD binding domain DOM22_RS09150 PF04030 D-arabinono-1,4-lactone oxidase DOM22_RS09155 PF01040 UbiA prenyltransferase family DOM22_RS09215 PF13419 Haloacid dehalogenase-like hydrolase DOM22_RS09240 PF04321 RmlD substrate binding domain DOM22_RS09245 PF08485 Polysaccharide biosynthesis protein C-terminal DOM22_RS09245 PF02719 Polysaccharide biosynthesis protein DOM22_RS09250 PF02350 UDP-N-acetylglucosamine 2-epimerase DOM22_RS09270 PF00953 Glycosyl transferase family 4 DOM22_RS09285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DOM22_RS09285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DOM22_RS09285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DOM22_RS09285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DOM22_RS09295 PF00291 Pyridoxal-phosphate dependent enzyme DOM22_RS09300 PF03372 Endonuclease/Exonuclease/phosphatase family DOM22_RS09330 PF03030 Inorganic H+ pyrophosphatase DOM22_RS09340 PF06055 Exopolysaccharide synthesis, ExoD DOM22_RS09350 PF18389 TrmO C-terminal domain DOM22_RS09350 PF01980 tRNA-methyltransferase O DOM22_RS09355 PF00588 SpoU rRNA Methylase family DOM22_RS09360 PF08264 Anticodon-binding domain of tRNA DOM22_RS09360 PF01588 Putative tRNA binding domain DOM22_RS09360 PF09334 tRNA synthetases class I (M) DOM22_RS09365 PF00484 Carbonic anhydrase DOM22_RS09370 PF01063 Amino-transferase class IV DOM22_RS09385 PF00535 Glycosyl transferase family 2 DOM22_RS09425 PF12146 Serine aminopeptidase, S33 DOM22_RS09505 PF00893 Small Multidrug Resistance protein DOM22_RS09510 PF03358 NADPH-dependent FMN reductase DOM22_RS09515 PF03814 Potassium-transporting ATPase A subunit DOM22_RS09525 PF02669 K+-transporting ATPase, c chain DOM22_RS09530 PF13492 GAF domain DOM22_RS09530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS09530 PF13493 Domain of unknown function (DUF4118) DOM22_RS09530 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS09530 PF02702 Osmosensitive K+ channel His kinase sensor domain DOM22_RS09535 PF00072 Response regulator receiver domain DOM22_RS09535 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS09555 PF01042 Endoribonuclease L-PSP DOM22_RS09565 PF02405 Permease MlaE DOM22_RS09570 PF09383 NIL domain DOM22_RS09570 PF00005 ABC transporter DOM22_RS09580 PF02687 FtsX-like permease family DOM22_RS09580 PF12704 MacB-like periplasmic core domain DOM22_RS09585 PF00132 Bacterial transferase hexapeptide (six repeats) DOM22_RS09585 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DOM22_RS09585 PF14602 Hexapeptide repeat of succinyl-transferase DOM22_RS09595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DOM22_RS09595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DOM22_RS09600 PF01177 Asp/Glu/Hydantoin racemase DOM22_RS09605 PF00571 CBS domain DOM22_RS09605 PF00478 IMP dehydrogenase / GMP reductase domain DOM22_RS09615 PF13460 NAD(P)H-binding DOM22_RS09625 PF01594 AI-2E family transporter DOM22_RS09660 PF17773 UPF0176 acylphosphatase like domain DOM22_RS09660 PF12368 Rhodanase C-terminal DOM22_RS09660 PF00581 Rhodanese-like domain DOM22_RS09665 PF03144 Elongation factor Tu domain 2 DOM22_RS09665 PF16658 Class II release factor RF3, C-terminal domain DOM22_RS09665 PF00009 Elongation factor Tu GTP binding domain DOM22_RS09670 PF00005 ABC transporter DOM22_RS09675 PF01061 ABC-2 type transporter DOM22_RS09680 PF00448 SRP54-type protein, GTPase domain DOM22_RS09680 PF02881 SRP54-type protein, helical bundle domain DOM22_RS09680 PF02978 Signal peptide binding domain DOM22_RS09685 PF00886 Ribosomal protein S16 DOM22_RS09695 PF01782 RimM N-terminal domain DOM22_RS09700 PF01746 tRNA (Guanine-1)-methyltransferase DOM22_RS09705 PF09936 SAM-dependent RNA methyltransferase DOM22_RS09705 PF01746 tRNA (Guanine-1)-methyltransferase DOM22_RS09710 PF01245 Ribosomal protein L19 DOM22_RS09715 PF01351 Ribonuclease HII DOM22_RS09725 PF03968 OstA-like protein DOM22_RS09725 PF04453 LPS transport system D DOM22_RS09760 PF00216 Bacterial DNA-binding protein DOM22_RS09785 PF00391 PEP-utilising enzyme, mobile domain DOM22_RS09785 PF02887 Pyruvate kinase, alpha/beta domain DOM22_RS09785 PF00224 Pyruvate kinase, barrel domain DOM22_RS09790 PF00027 Cyclic nucleotide-binding domain DOM22_RS09790 PF04960 Glutaminase DOM22_RS09795 PF01144 Coenzyme A transferase DOM22_RS09800 PF01144 Coenzyme A transferase DOM22_RS09805 PF00108 Thiolase, N-terminal domain DOM22_RS09805 PF02803 Thiolase, C-terminal domain DOM22_RS09835 PF00919 Uncharacterized protein family UPF0004 DOM22_RS09835 PF04055 Radical SAM superfamily DOM22_RS09835 PF01938 TRAM domain DOM22_RS09845 PF00999 Sodium/hydrogen exchanger family DOM22_RS09845 PF02254 TrkA-N domain DOM22_RS09850 PF03781 Sulfatase-modifying factor enzyme 1 DOM22_RS09855 PF00132 Bacterial transferase hexapeptide (six repeats) DOM22_RS09860 PF00571 CBS domain DOM22_RS09860 PF00478 IMP dehydrogenase / GMP reductase domain DOM22_RS09865 PF02540 NAD synthase DOM22_RS09865 PF00117 Glutamine amidotransferase class-I DOM22_RS09865 PF00958 GMP synthase C terminal domain DOM22_RS09895 PF02811 PHP domain DOM22_RS09895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOM22_RS09895 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOM22_RS09895 PF14579 Helix-hairpin-helix motif DOM22_RS09915 PF01336 OB-fold nucleic acid binding domain DOM22_RS09915 PF00152 tRNA synthetases class II (D, K and N) DOM22_RS09920 PF06736 Protein of unknown function (DUF1211) DOM22_RS09935 PF02798 Glutathione S-transferase, N-terminal domain DOM22_RS09940 PF01171 PP-loop family DOM22_RS09955 PF03734 L,D-transpeptidase catalytic domain DOM22_RS09970 PF05958 tRNA (Uracil-5-)-methyltransferase DOM22_RS09980 PF17820 PDZ domain DOM22_RS09980 PF13180 PDZ domain DOM22_RS10045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DOM22_RS10045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DOM22_RS10055 PF00750 tRNA synthetases class I (R) DOM22_RS10055 PF05746 DALR anticodon binding domain DOM22_RS10055 PF03485 Arginyl tRNA synthetase N terminal domain DOM22_RS10065 PF00589 Phage integrase family DOM22_RS10065 PF18644 Phage integrase SAM-like domain DOM22_RS10080 PF00005 ABC transporter DOM22_RS10085 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS10100 PF01783 Ribosomal L32p protein family DOM22_RS10105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DOM22_RS10105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DOM22_RS10110 PF00698 Acyl transferase domain DOM22_RS10120 PF00550 Phosphopantetheine attachment site DOM22_RS10125 PF02801 Beta-ketoacyl synthase, C-terminal domain DOM22_RS10125 PF00109 Beta-ketoacyl synthase, N-terminal domain DOM22_RS10130 PF02502 Ribose/Galactose Isomerase DOM22_RS10135 PF00464 Serine hydroxymethyltransferase DOM22_RS10140 PF01551 Peptidase family M23 DOM22_RS10140 PF01476 LysM domain DOM22_RS10160 PF02705 K+ potassium transporter DOM22_RS10165 PF03358 NADPH-dependent FMN reductase DOM22_RS10180 PF01618 MotA/TolQ/ExbB proton channel family DOM22_RS10185 PF02472 Biopolymer transport protein ExbD/TolR DOM22_RS10240 PF04055 Radical SAM superfamily DOM22_RS10240 PF16199 Radical_SAM C-terminal domain DOM22_RS10245 PF03477 ATP cone domain DOM22_RS10245 PF00317 Ribonucleotide reductase, all-alpha domain DOM22_RS10245 PF02867 Ribonucleotide reductase, barrel domain DOM22_RS10250 PF00268 Ribonucleotide reductase, small chain DOM22_RS10275 PF04079 Segregation and condensation complex subunit ScpB DOM22_RS10280 PF02616 Segregation and condensation protein ScpA DOM22_RS10285 PF02163 Peptidase family M50 DOM22_RS10290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOM22_RS10290 PF02770 Acyl-CoA dehydrogenase, middle domain DOM22_RS10290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DOM22_RS10295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOM22_RS10300 PF00990 Diguanylate cyclase, GGDEF domain DOM22_RS10300 PF00563 EAL domain DOM22_RS10300 PF00498 FHA domain DOM22_RS10305 PF04183 IucA / IucC family DOM22_RS10305 PF06276 Ferric iron reductase FhuF-like transporter DOM22_RS10315 PF03051 Peptidase C1-like family DOM22_RS10330 PF00849 RNA pseudouridylate synthase DOM22_RS10330 PF01479 S4 domain DOM22_RS10360 PF01709 Transcriptional regulator DOM22_RS10380 PF02657 Fe-S metabolism associated domain DOM22_RS10405 PF07690 Major Facilitator Superfamily DOM22_RS10420 PF01966 HD domain DOM22_RS10420 PF08335 GlnD PII-uridylyltransferase DOM22_RS10420 PF01909 Nucleotidyltransferase domain DOM22_RS10425 PF05192 MutS domain III DOM22_RS10425 PF01624 MutS domain I DOM22_RS10425 PF00488 MutS domain V DOM22_RS10425 PF05190 MutS family domain IV DOM22_RS10425 PF05188 MutS domain II DOM22_RS10430 PF00672 HAMP domain DOM22_RS10430 PF02203 Tar ligand binding domain homologue DOM22_RS10430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS10435 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS10435 PF00072 Response regulator receiver domain DOM22_RS10450 PF02875 Mur ligase family, glutamate ligase domain DOM22_RS10450 PF08245 Mur ligase middle domain DOM22_RS10450 PF01225 Mur ligase family, catalytic domain DOM22_RS10455 PF00144 Beta-lactamase DOM22_RS10460 PF17676 LD-carboxypeptidase C-terminal domain DOM22_RS10460 PF02016 LD-carboxypeptidase N-terminal domain DOM22_RS10465 PF10397 Adenylosuccinate lyase C-terminus DOM22_RS10465 PF00206 Lyase DOM22_RS10475 PF00255 Glutathione peroxidase DOM22_RS10485 PF00209 Sodium:neurotransmitter symporter family DOM22_RS10490 PF01926 50S ribosome-binding GTPase DOM22_RS10490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DOM22_RS10495 PF07650 KH domain DOM22_RS10495 PF01926 50S ribosome-binding GTPase DOM22_RS10500 PF00035 Double-stranded RNA binding motif DOM22_RS10500 PF14622 Ribonuclease-III-like DOM22_RS10505 PF00919 Uncharacterized protein family UPF0004 DOM22_RS10505 PF04055 Radical SAM superfamily DOM22_RS10515 PF00266 Aminotransferase class-V DOM22_RS10525 PF13302 Acetyltransferase (GNAT) domain DOM22_RS10530 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DOM22_RS10535 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DOM22_RS10540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DOM22_RS10540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DOM22_RS10540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DOM22_RS10540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DOM22_RS10550 PF02457 DisA bacterial checkpoint controller nucleotide-binding DOM22_RS10555 PF01434 Peptidase family M41 DOM22_RS10555 PF17862 AAA+ lid domain DOM22_RS10555 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS10560 PF01171 PP-loop family DOM22_RS10565 PF00171 Aldehyde dehydrogenase family DOM22_RS10585 PF00072 Response regulator receiver domain DOM22_RS10585 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS10590 PF08448 PAS fold DOM22_RS10590 PF08447 PAS fold DOM22_RS10605 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DOM22_RS10610 PF03061 Thioesterase superfamily DOM22_RS10615 PF01066 CDP-alcohol phosphatidyltransferase DOM22_RS10630 PF00939 Sodium:sulfate symporter transmembrane region DOM22_RS10665 PF01522 Polysaccharide deacetylase DOM22_RS10665 PF14883 Hypothetical glycosyl hydrolase family 13 DOM22_RS10670 PF00535 Glycosyl transferase family 2 DOM22_RS10890 PF02630 SCO1/SenC DOM22_RS10905 PF00005 ABC transporter DOM22_RS10910 PF00005 ABC transporter DOM22_RS10915 PF00005 ABC transporter DOM22_RS10920 PF13533 Biotin-lipoyl like DOM22_RS10930 PF12729 Four helix bundle sensory module for signal transduction DOM22_RS10930 PF00672 HAMP domain DOM22_RS10930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS10935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOM22_RS10955 PF02421 Ferrous iron transport protein B DOM22_RS10955 PF07670 Nucleoside recognition DOM22_RS10955 PF07664 Ferrous iron transport protein B C terminus DOM22_RS10975 PF01242 6-pyruvoyl tetrahydropterin synthase DOM22_RS10985 PF02666 Phosphatidylserine decarboxylase DOM22_RS10995 PF01523 Putative modulator of DNA gyrase DOM22_RS11030 PF02310 B12 binding domain DOM22_RS11030 PF01642 Methylmalonyl-CoA mutase DOM22_RS11035 PF00378 Enoyl-CoA hydratase/isomerase DOM22_RS11040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DOM22_RS11040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DOM22_RS11055 PF00107 Zinc-binding dehydrogenase DOM22_RS11055 PF13823 Alcohol dehydrogenase GroES-associated DOM22_RS11055 PF08240 Alcohol dehydrogenase GroES-like domain DOM22_RS11060 PF04239 Protein of unknown function (DUF421) DOM22_RS11070 PF01068 ATP dependent DNA ligase domain DOM22_RS11070 PF04675 DNA ligase N terminus DOM22_RS11070 PF04679 ATP dependent DNA ligase C terminal region DOM22_RS11075 PF00271 Helicase conserved C-terminal domain DOM22_RS11075 PF08494 DEAD/H associated DOM22_RS11075 PF00270 DEAD/DEAH box helicase DOM22_RS11095 PF02225 PA domain DOM22_RS11095 PF13860 FlgD Ig-like domain DOM22_RS11095 PF05922 Peptidase inhibitor I9 DOM22_RS11095 PF00082 Subtilase family DOM22_RS11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS11105 PF00989 PAS fold DOM22_RS11105 PF00072 Response regulator receiver domain DOM22_RS11105 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS11105 PF01627 Hpt domain DOM22_RS11105 PF18415 Histidine kinase receptor ArcB trans-membrane domain DOM22_RS11155 PF00854 POT family DOM22_RS11160 PF05173 Dihydrodipicolinate reductase, C-terminus DOM22_RS11160 PF01113 Dihydrodipicolinate reductase, N-terminus DOM22_RS11165 PF00982 Glycosyltransferase family 20 DOM22_RS11170 PF00723 Glycosyl hydrolases family 15 DOM22_RS11180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS11180 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS11180 PF08521 Two-component sensor kinase N-terminal DOM22_RS11190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DOM22_RS11190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DOM22_RS11190 PF00378 Enoyl-CoA hydratase/isomerase DOM22_RS11195 PF02803 Thiolase, C-terminal domain DOM22_RS11195 PF00108 Thiolase, N-terminal domain DOM22_RS11205 PF00390 Malic enzyme, N-terminal domain DOM22_RS11205 PF03949 Malic enzyme, NAD binding domain DOM22_RS11205 PF01515 Phosphate acetyl/butaryl transferase DOM22_RS11215 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DOM22_RS11215 PF06165 Glycosyltransferase family 36 DOM22_RS11215 PF10091 Putative glucoamylase DOM22_RS11220 PF16360 GTP-binding GTPase Middle Region DOM22_RS11220 PF13167 GTP-binding GTPase N-terminal DOM22_RS11220 PF01926 50S ribosome-binding GTPase DOM22_RS11240 PF03061 Thioesterase superfamily DOM22_RS11245 PF00072 Response regulator receiver domain DOM22_RS11245 PF00196 Bacterial regulatory proteins, luxR family DOM22_RS11250 PF00072 Response regulator receiver domain DOM22_RS11275 PF12627 Probable RNA and SrmB- binding site of polymerase A DOM22_RS11275 PF13735 tRNA nucleotidyltransferase domain 2 putative DOM22_RS11275 PF01743 Poly A polymerase head domain DOM22_RS11280 PF08331 Domain of unknown function (DUF1730) DOM22_RS11295 PF00654 Voltage gated chloride channel DOM22_RS11300 PF04102 SlyX DOM22_RS11320 PF00491 Arginase family DOM22_RS11325 PF01212 Beta-eliminating lyase DOM22_RS11330 PF03301 Tryptophan 2,3-dioxygenase DOM22_RS11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS11335 PF00183 Hsp90 protein DOM22_RS11345 PF00578 AhpC/TSA family DOM22_RS11355 PF00501 AMP-binding enzyme DOM22_RS11355 PF13193 AMP-binding enzyme C-terminal domain DOM22_RS11360 PF01355 High potential iron-sulfur protein DOM22_RS11370 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DOM22_RS11375 PF00873 AcrB/AcrD/AcrF family DOM22_RS11395 PF01479 S4 domain DOM22_RS11395 PF00849 RNA pseudouridylate synthase DOM22_RS11455 PF07690 Major Facilitator Superfamily DOM22_RS11460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOM22_RS11460 PF11490 DNA polymerase III polC-type N-terminus II DOM22_RS11460 PF14579 Helix-hairpin-helix motif DOM22_RS11460 PF02811 PHP domain DOM22_RS11460 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOM22_RS11460 PF00929 Exonuclease DOM22_RS11470 PF00012 Hsp70 protein DOM22_RS11490 PF05681 Fumarate hydratase (Fumerase) DOM22_RS11490 PF05683 Fumarase C-terminus DOM22_RS11505 PF00196 Bacterial regulatory proteins, luxR family DOM22_RS11515 PF00654 Voltage gated chloride channel DOM22_RS11520 PF03060 Nitronate monooxygenase DOM22_RS11555 PF01925 Sulfite exporter TauE/SafE DOM22_RS11565 PF07690 Major Facilitator Superfamily DOM22_RS11580 PF12072 Domain of unknown function (DUF3552) DOM22_RS11580 PF01966 HD domain DOM22_RS11585 PF09308 LuxQ, periplasmic DOM22_RS11585 PF00072 Response regulator receiver domain DOM22_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS11585 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS11590 PF01595 Cyclin M transmembrane N-terminal domain DOM22_RS11590 PF00571 CBS domain DOM22_RS11590 PF03471 Transporter associated domain DOM22_RS11625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DOM22_RS11625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOM22_RS11625 PF02770 Acyl-CoA dehydrogenase, middle domain DOM22_RS11625 PF09317 Domain of unknown function (DUF1974) DOM22_RS11635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DOM22_RS11635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DOM22_RS11635 PF06827 Zinc finger found in FPG and IleRS DOM22_RS11645 PF00672 HAMP domain DOM22_RS11645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS11645 PF02203 Tar ligand binding domain homologue DOM22_RS11675 PF02798 Glutathione S-transferase, N-terminal domain DOM22_RS11675 PF00043 Glutathione S-transferase, C-terminal domain DOM22_RS11710 PF03466 LysR substrate binding domain DOM22_RS11710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS11715 PF10417 C-terminal domain of 1-Cys peroxiredoxin DOM22_RS11715 PF00578 AhpC/TSA family DOM22_RS11720 PF13192 Thioredoxin domain DOM22_RS11720 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM22_RS11740 PF01343 Peptidase family S49 DOM22_RS11740 PF08496 Peptidase family S49 N-terminal DOM22_RS11745 PF00005 ABC transporter DOM22_RS11745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DOM22_RS11750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DOM22_RS11750 PF00005 ABC transporter DOM22_RS11755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DOM22_RS11760 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS11765 PF12911 N-terminal TM domain of oligopeptide transport permease C DOM22_RS11765 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS11775 PF02416 mttA/Hcf106 family DOM22_RS11780 PF02416 mttA/Hcf106 family DOM22_RS11785 PF03009 Glycerophosphoryl diester phosphodiesterase family DOM22_RS11795 PF03449 Transcription elongation factor, N-terminal DOM22_RS11795 PF01272 Transcription elongation factor, GreA/GreB, C-term DOM22_RS11810 PF08443 RimK-like ATP-grasp domain DOM22_RS11810 PF18030 RimK PreATP-grasp domain DOM22_RS11815 PF16123 Hydroxyacylglutathione hydrolase C-terminus DOM22_RS11815 PF00753 Metallo-beta-lactamase superfamily DOM22_RS11825 PF04820 Tryptophan halogenase DOM22_RS11835 PF18389 TrmO C-terminal domain DOM22_RS11835 PF01980 tRNA-methyltransferase O DOM22_RS11840 PF08264 Anticodon-binding domain of tRNA DOM22_RS11840 PF00133 tRNA synthetases class I (I, L, M and V) DOM22_RS11845 PF01022 Bacterial regulatory protein, arsR family DOM22_RS11850 PF07690 Major Facilitator Superfamily DOM22_RS11865 PF00484 Carbonic anhydrase DOM22_RS11880 PF01470 Pyroglutamyl peptidase DOM22_RS11885 PF01472 PUA domain DOM22_RS11885 PF00696 Amino acid kinase family DOM22_RS11890 PF00171 Aldehyde dehydrogenase family DOM22_RS11900 PF01699 Sodium/calcium exchanger protein DOM22_RS11905 PF00171 Aldehyde dehydrogenase family DOM22_RS12000 PF00171 Aldehyde dehydrogenase family DOM22_RS12010 PF00999 Sodium/hydrogen exchanger family DOM22_RS12015 PF00082 Subtilase family DOM22_RS12040 PF00873 AcrB/AcrD/AcrF family DOM22_RS12045 PF00089 Trypsin DOM22_RS12050 PF02254 TrkA-N domain DOM22_RS12050 PF00999 Sodium/hydrogen exchanger family DOM22_RS12055 PF04073 Aminoacyl-tRNA editing domain DOM22_RS12065 PF00403 Heavy-metal-associated domain DOM22_RS12075 PF00115 Cytochrome C and Quinol oxidase polypeptide I DOM22_RS12085 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DOM22_RS12085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DOM22_RS12090 PF13746 4Fe-4S dicluster domain DOM22_RS12090 PF12801 4Fe-4S binding domain DOM22_RS12090 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DOM22_RS12110 PF06794 Uncharacterised protein family (UPF0270) DOM22_RS12115 PF00075 RNase H DOM22_RS12120 PF12823 Domain of unknown function (DUF3817) DOM22_RS12135 PF09308 LuxQ, periplasmic DOM22_RS12135 PF00072 Response regulator receiver domain DOM22_RS12135 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS12135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS12145 PF00899 ThiF family DOM22_RS12160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOM22_RS12160 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DOM22_RS12165 PF13419 Haloacid dehalogenase-like hydrolase DOM22_RS12170 PF07690 Major Facilitator Superfamily DOM22_RS12170 PF00083 Sugar (and other) transporter DOM22_RS12190 PF01078 Magnesium chelatase, subunit ChlI DOM22_RS12190 PF13335 Magnesium chelatase, subunit ChlI C-terminal DOM22_RS12195 PF00589 Phage integrase family DOM22_RS12195 PF02899 Phage integrase, N-terminal SAM-like domain DOM22_RS12215 PF08486 Stage II sporulation protein DOM22_RS12220 PF01145 SPFH domain / Band 7 family DOM22_RS12245 PF03023 Lipid II flippase MurJ DOM22_RS12250 PF08459 UvrC Helix-hairpin-helix N-terminal DOM22_RS12250 PF01541 GIY-YIG catalytic domain DOM22_RS12250 PF02151 UvrB/uvrC motif DOM22_RS12255 PF00271 Helicase conserved C-terminal domain DOM22_RS12255 PF04851 Type III restriction enzyme, res subunit DOM22_RS12255 PF02151 UvrB/uvrC motif DOM22_RS12255 PF12344 Ultra-violet resistance protein B DOM22_RS12255 PF17757 UvrB interaction domain DOM22_RS12260 PF01804 Penicillin amidase DOM22_RS12270 PF09190 DALR domain DOM22_RS12270 PF01406 tRNA synthetases class I (C) catalytic domain DOM22_RS12275 PF00749 tRNA synthetases class I (E and Q), catalytic domain DOM22_RS12280 PF02559 CarD-like/TRCF domain DOM22_RS12285 PF00082 Subtilase family DOM22_RS12320 PF00271 Helicase conserved C-terminal domain DOM22_RS12320 PF00270 DEAD/DEAH box helicase DOM22_RS12320 PF17191 RecG wedge domain DOM22_RS12325 PF01966 HD domain DOM22_RS12325 PF11871 Domain of unknown function (DUF3391) DOM22_RS12340 PF00072 Response regulator receiver domain DOM22_RS12340 PF09308 LuxQ, periplasmic DOM22_RS12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS12340 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS12355 PF01336 OB-fold nucleic acid binding domain DOM22_RS12355 PF00152 tRNA synthetases class II (D, K and N) DOM22_RS12360 PF01791 DeoC/LacD family aldolase DOM22_RS12365 PF01521 Iron-sulphur cluster biosynthesis DOM22_RS12365 PF01106 NifU-like domain DOM22_RS12370 PF01554 MatE DOM22_RS12395 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS12395 PF00072 Response regulator receiver domain DOM22_RS12395 PF09308 LuxQ, periplasmic DOM22_RS12415 PF00111 2Fe-2S iron-sulfur cluster binding domain DOM22_RS12415 PF03476 MOSC N-terminal beta barrel domain DOM22_RS12415 PF03473 MOSC domain DOM22_RS12425 PF07690 Major Facilitator Superfamily DOM22_RS12430 PF13406 Transglycosylase SLT domain DOM22_RS12435 PF07690 Major Facilitator Superfamily DOM22_RS12435 PF00083 Sugar (and other) transporter DOM22_RS12440 PF00085 Thioredoxin DOM22_RS12460 PF00899 ThiF family DOM22_RS12465 PF01026 TatD related DNase DOM22_RS12480 PF09335 SNARE associated Golgi protein DOM22_RS12485 PF00849 RNA pseudouridylate synthase DOM22_RS12485 PF01479 S4 domain DOM22_RS12505 PF01170 Putative RNA methylase family UPF0020 DOM22_RS12505 PF02926 THUMP domain DOM22_RS12525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DOM22_RS12530 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DOM22_RS12585 PF13091 PLD-like domain DOM22_RS12585 PF13396 Phospholipase_D-nuclease N-terminal DOM22_RS12600 PF01339 CheB methylesterase DOM22_RS12600 PF00072 Response regulator receiver domain DOM22_RS12620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS12620 PF00072 Response regulator receiver domain DOM22_RS12620 PF01627 Hpt domain DOM22_RS12620 PF01584 CheW-like domain DOM22_RS12630 PF00072 Response regulator receiver domain DOM22_RS12640 PF00471 Ribosomal protein L33 DOM22_RS12675 PF11849 Domain of unknown function (DUF3369) DOM22_RS12695 PF00175 Oxidoreductase NAD-binding domain DOM22_RS12695 PF00970 Oxidoreductase FAD-binding domain DOM22_RS12695 PF00111 2Fe-2S iron-sulfur cluster binding domain DOM22_RS12700 PF00892 EamA-like transporter family DOM22_RS12710 PF17760 UvrA interaction domain DOM22_RS12710 PF17755 UvrA DNA-binding domain DOM22_RS12710 PF00005 ABC transporter DOM22_RS12725 PF10502 Signal peptidase, peptidase S26 DOM22_RS12740 PF01475 Ferric uptake regulator family DOM22_RS12745 PF02649 Type I GTP cyclohydrolase folE2 DOM22_RS12750 PF02545 Maf-like protein DOM22_RS12755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DOM22_RS12840 PF04085 rod shape-determining protein MreC DOM22_RS12850 PF00905 Penicillin binding protein transpeptidase domain DOM22_RS12850 PF03717 Penicillin-binding Protein dimerisation domain DOM22_RS12855 PF01098 Cell cycle protein DOM22_RS12885 PF13411 MerR HTH family regulatory protein DOM22_RS12890 PF01464 Transglycosylase SLT domain DOM22_RS12890 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DOM22_RS12905 PF00085 Thioredoxin DOM22_RS12920 PF17782 DprA winged helix domain DOM22_RS12920 PF02481 DNA recombination-mediator protein A DOM22_RS12940 PF03772 Competence protein DOM22_RS12940 PF00753 Metallo-beta-lactamase superfamily DOM22_RS12955 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DOM22_RS12960 PF04183 IucA / IucC family DOM22_RS12960 PF06276 Ferric iron reductase FhuF-like transporter DOM22_RS12970 PF06276 Ferric iron reductase FhuF-like transporter DOM22_RS12970 PF04183 IucA / IucC family DOM22_RS13000 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DOM22_RS13010 PF05496 Holliday junction DNA helicase RuvB P-loop domain DOM22_RS13010 PF05491 RuvB C-terminal winged helix domain DOM22_RS13010 PF17864 RuvB AAA lid domain DOM22_RS13015 PF07499 RuvA, C-terminal domain DOM22_RS13015 PF01330 RuvA N terminal domain DOM22_RS13020 PF02075 Crossover junction endodeoxyribonuclease RuvC DOM22_RS13030 PF09285 Elongation factor P, C-terminal DOM22_RS13030 PF08207 Elongation factor P (EF-P) KOW-like domain DOM22_RS13030 PF01132 Elongation factor P (EF-P) OB domain DOM22_RS13065 PF03972 MmgE/PrpD family DOM22_RS13090 PF01037 Lrp/AsnC ligand binding domain DOM22_RS13090 PF13404 AsnC-type helix-turn-helix domain DOM22_RS13125 PF00749 tRNA synthetases class I (E and Q), catalytic domain DOM22_RS13125 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DOM22_RS13130 PF03109 ABC1 family DOM22_RS13190 PF01618 MotA/TolQ/ExbB proton channel family DOM22_RS13195 PF13677 Membrane MotB of proton-channel complex MotA/MotB DOM22_RS13195 PF00691 OmpA family DOM22_RS13210 PF00285 Citrate synthase, C-terminal domain DOM22_RS13240 PF12805 FUSC-like inner membrane protein yccS DOM22_RS13250 PF01433 Peptidase family M1 domain DOM22_RS13250 PF11940 Domain of unknown function (DUF3458) Ig-like fold DOM22_RS13250 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DOM22_RS13265 PF01227 GTP cyclohydrolase I DOM22_RS13330 PF01593 Flavin containing amine oxidoreductase DOM22_RS13340 PF00664 ABC transporter transmembrane region DOM22_RS13340 PF00005 ABC transporter DOM22_RS13345 PF00664 ABC transporter transmembrane region DOM22_RS13345 PF00005 ABC transporter DOM22_RS13350 PF00571 CBS domain DOM22_RS13350 PF01769 Divalent cation transporter DOM22_RS13350 PF03448 MgtE intracellular N domain DOM22_RS13365 PF00082 Subtilase family DOM22_RS13400 PF02789 Cytosol aminopeptidase family, N-terminal domain DOM22_RS13400 PF00883 Cytosol aminopeptidase family, catalytic domain DOM22_RS13410 PF04379 ApaG domain DOM22_RS13425 PF13302 Acetyltransferase (GNAT) domain DOM22_RS13480 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DOM22_RS13480 PF01243 Pyridoxamine 5'-phosphate oxidase DOM22_RS13485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOM22_RS13485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DOM22_RS13500 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS13500 PF00072 Response regulator receiver domain DOM22_RS13505 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS13505 PF00672 HAMP domain DOM22_RS13535 PF13545 Crp-like helix-turn-helix domain DOM22_RS13535 PF00027 Cyclic nucleotide-binding domain DOM22_RS13540 PF00691 OmpA family DOM22_RS13555 PF03466 LysR substrate binding domain DOM22_RS13555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS13560 PF00210 Ferritin-like domain DOM22_RS13575 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS13575 PF00072 Response regulator receiver domain DOM22_RS13580 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS13580 PF00672 HAMP domain DOM22_RS13580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS13605 PF00082 Subtilase family DOM22_RS13605 PF01483 Proprotein convertase P-domain DOM22_RS13650 PF17200 Single Cache domain 2 DOM22_RS13650 PF00672 HAMP domain DOM22_RS13650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS13660 PF00171 Aldehyde dehydrogenase family DOM22_RS13680 PF00485 Phosphoribulokinase / Uridine kinase family DOM22_RS13685 PF13520 Amino acid permease DOM22_RS13700 PF08274 PhnA Zinc-Ribbon DOM22_RS13700 PF03831 PhnA domain DOM22_RS13730 PF00684 DnaJ central domain DOM22_RS13730 PF00226 DnaJ domain DOM22_RS13730 PF01556 DnaJ C terminal domain DOM22_RS13740 PF07963 Prokaryotic N-terminal methylation motif DOM22_RS13740 PF14245 Type IV pilin PilA DOM22_RS13745 PF02617 ATP-dependent Clp protease adaptor protein ClpS DOM22_RS13750 PF07724 AAA domain (Cdc48 subfamily) DOM22_RS13750 PF02861 Clp amino terminal domain, pathogenicity island component DOM22_RS13750 PF17871 AAA lid domain DOM22_RS13750 PF10431 C-terminal, D2-small domain, of ClpB protein DOM22_RS13750 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS13755 PF01435 Peptidase family M48 DOM22_RS13760 PF01464 Transglycosylase SLT domain DOM22_RS13760 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DOM22_RS13770 PF00082 Subtilase family DOM22_RS13790 PF00795 Carbon-nitrogen hydrolase DOM22_RS13795 PF00488 MutS domain V DOM22_RS13795 PF01713 Smr domain DOM22_RS13865 PF18324 Hypothetical protein TT1725 DOM22_RS13865 PF00180 Isocitrate/isopropylmalate dehydrogenase DOM22_RS13880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS13880 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS13880 PF02702 Osmosensitive K+ channel His kinase sensor domain DOM22_RS13880 PF13493 Domain of unknown function (DUF4118) DOM22_RS13885 PF01430 Hsp33 protein DOM22_RS13895 PF01557 Fumarylacetoacetate (FAA) hydrolase family DOM22_RS13900 PF00171 Aldehyde dehydrogenase family DOM22_RS13930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOM22_RS13935 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DOM22_RS13985 PF01590 GAF domain DOM22_RS13985 PF02954 Bacterial regulatory protein, Fis family DOM22_RS13990 PF00089 Trypsin DOM22_RS14000 PF00089 Trypsin DOM22_RS14015 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DOM22_RS14015 PF01048 Phosphorylase superfamily DOM22_RS14020 PF02678 Pirin DOM22_RS14020 PF05726 Pirin C-terminal cupin domain DOM22_RS14050 PF00535 Glycosyl transferase family 2 DOM22_RS14080 PF00550 Phosphopantetheine attachment site DOM22_RS14085 PF00109 Beta-ketoacyl synthase, N-terminal domain DOM22_RS14085 PF02801 Beta-ketoacyl synthase, C-terminal domain DOM22_RS14095 PF01522 Polysaccharide deacetylase DOM22_RS14105 PF00550 Phosphopantetheine attachment site DOM22_RS14105 PF00698 Acyl transferase domain DOM22_RS14105 PF02801 Beta-ketoacyl synthase, C-terminal domain DOM22_RS14105 PF00109 Beta-ketoacyl synthase, N-terminal domain DOM22_RS14105 PF16197 Ketoacyl-synthetase C-terminal extension DOM22_RS14105 PF08659 KR domain DOM22_RS14110 PF00550 Phosphopantetheine attachment site DOM22_RS14115 PF07977 FabA-like domain DOM22_RS14140 PF00221 Aromatic amino acid lyase DOM22_RS14150 PF04536 TPM domain DOM22_RS14155 PF04011 LemA family DOM22_RS14160 PF10672 S-adenosylmethionine-dependent methyltransferase DOM22_RS14160 PF02926 THUMP domain DOM22_RS14160 PF01170 Putative RNA methylase family UPF0020 DOM22_RS14170 PF00924 Mechanosensitive ion channel DOM22_RS14185 PF00588 SpoU rRNA Methylase family DOM22_RS14190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DOM22_RS14190 PF02770 Acyl-CoA dehydrogenase, middle domain DOM22_RS14190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DOM22_RS14195 PF02464 Competence-damaged protein DOM22_RS14195 PF00994 Probable molybdopterin binding domain DOM22_RS14195 PF18146 Damage-inducible protein CinA KH domain DOM22_RS14205 PF07690 Major Facilitator Superfamily DOM22_RS14210 PF00575 S1 RNA binding domain DOM22_RS14210 PF02401 LytB protein DOM22_RS14215 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DOM22_RS14215 PF02867 Ribonucleotide reductase, barrel domain DOM22_RS14225 PF00266 Aminotransferase class-V DOM22_RS14230 PF01521 Iron-sulphur cluster biosynthesis DOM22_RS14245 PF00561 alpha/beta hydrolase fold DOM22_RS14255 PF01479 S4 domain DOM22_RS14255 PF00579 tRNA synthetases class I (W and Y) DOM22_RS14260 PF12072 Domain of unknown function (DUF3552) DOM22_RS14260 PF00013 KH domain DOM22_RS14260 PF01966 HD domain DOM22_RS14265 PF01812 5-formyltetrahydrofolate cyclo-ligase family DOM22_RS14270 PF05164 Cell division protein ZapA DOM22_RS14300 PF13460 NAD(P)H-binding DOM22_RS14305 PF00448 SRP54-type protein, GTPase domain DOM22_RS14305 PF02881 SRP54-type protein, helical bundle domain DOM22_RS14310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS14310 PF00672 HAMP domain DOM22_RS14310 PF02203 Tar ligand binding domain homologue DOM22_RS14315 PF06826 Predicted Permease Membrane Region DOM22_RS14345 PF00881 Nitroreductase family DOM22_RS14355 PF00664 ABC transporter transmembrane region DOM22_RS14355 PF00005 ABC transporter DOM22_RS14380 PF03466 LysR substrate binding domain DOM22_RS14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS14395 PF03466 LysR substrate binding domain DOM22_RS14405 PF06470 SMC proteins Flexible Hinge Domain DOM22_RS14405 PF02463 RecF/RecN/SMC N terminal domain DOM22_RS14435 PF00391 PEP-utilising enzyme, mobile domain DOM22_RS14435 PF02896 PEP-utilising enzyme, TIM barrel domain DOM22_RS14435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DOM22_RS14460 PF03129 Anticodon binding domain DOM22_RS14460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DOM22_RS14480 PF10609 NUBPL iron-transfer P-loop NTPase DOM22_RS14515 PF00877 NlpC/P60 family DOM22_RS14515 PF01476 LysM domain DOM22_RS14545 PF03449 Transcription elongation factor, N-terminal DOM22_RS14545 PF01272 Transcription elongation factor, GreA/GreB, C-term DOM22_RS14560 PF00211 Adenylate and Guanylate cyclase catalytic domain DOM22_RS14570 PF12849 PBP superfamily domain DOM22_RS14580 PF00005 ABC transporter DOM22_RS14595 PF13393 Histidyl-tRNA synthetase DOM22_RS14595 PF03129 Anticodon binding domain DOM22_RS14605 PF00082 Subtilase family DOM22_RS14620 PF01790 Prolipoprotein diacylglyceryl transferase DOM22_RS14645 PF01029 NusB family DOM22_RS14645 PF01189 16S rRNA methyltransferase RsmB/F DOM22_RS14655 PF03477 ATP cone domain DOM22_RS14660 PF01029 NusB family DOM22_RS14675 PF03618 Kinase/pyrophosphorylase DOM22_RS14690 PF13396 Phospholipase_D-nuclease N-terminal DOM22_RS14690 PF13091 PLD-like domain DOM22_RS14700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS14705 PF03466 LysR substrate binding domain DOM22_RS14705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS14720 PF05193 Peptidase M16 inactive domain DOM22_RS14720 PF00675 Insulinase (Peptidase family M16) DOM22_RS14725 PF03748 Flagellar basal body-associated protein FliL DOM22_RS14755 PF01230 HIT domain DOM22_RS14760 PF01343 Peptidase family S49 DOM22_RS14765 PF00575 S1 RNA binding domain DOM22_RS14775 PF00561 alpha/beta hydrolase fold DOM22_RS14785 PF00089 Trypsin DOM22_RS14805 PF02224 Cytidylate kinase DOM22_RS14810 PF00155 Aminotransferase class I and II DOM22_RS14825 PF01625 Peptide methionine sulfoxide reductase DOM22_RS14840 PF13291 ACT domain DOM22_RS14840 PF00291 Pyridoxal-phosphate dependent enzyme DOM22_RS14855 PF00121 Triosephosphate isomerase DOM22_RS14860 PF00162 Phosphoglycerate kinase DOM22_RS14865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DOM22_RS14865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DOM22_RS14875 PF03006 Haemolysin-III related DOM22_RS14890 PF01026 TatD related DNase DOM22_RS14895 PF09115 DNA polymerase III, delta subunit, C terminal DOM22_RS14900 PF02223 Thymidylate kinase DOM22_RS14955 PF01544 CorA-like Mg2+ transporter protein DOM22_RS14995 PF00005 ABC transporter DOM22_RS15015 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DOM22_RS15015 PF01189 16S rRNA methyltransferase RsmB/F DOM22_RS15015 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DOM22_RS15025 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS15025 PF01627 Hpt domain DOM22_RS15025 PF00672 HAMP domain DOM22_RS15025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS15025 PF00072 Response regulator receiver domain DOM22_RS15025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOM22_RS15030 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS15030 PF16736 Single Cache-like DOM22_RS15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS15030 PF00989 PAS fold DOM22_RS15035 PF00072 Response regulator receiver domain DOM22_RS15035 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS15040 PF01895 PhoU domain DOM22_RS15050 PF02541 Ppx/GppA phosphatase family DOM22_RS15065 PF13089 Polyphosphate kinase N-terminal domain DOM22_RS15065 PF02503 Polyphosphate kinase middle domain DOM22_RS15065 PF17941 Polyphosphate kinase C-terminal domain 1 DOM22_RS15065 PF13090 Polyphosphate kinase C-terminal domain 2 DOM22_RS15070 PF00586 AIR synthase related protein, N-terminal domain DOM22_RS15070 PF02769 AIR synthase related protein, C-terminal domain DOM22_RS15080 PF03466 LysR substrate binding domain DOM22_RS15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS15085 PF04264 YceI-like domain DOM22_RS15090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DOM22_RS15100 PF00873 AcrB/AcrD/AcrF family DOM22_RS15120 PF00005 ABC transporter DOM22_RS15120 PF12848 ABC transporter DOM22_RS15120 PF16326 ABC transporter C-terminal domain DOM22_RS15125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DOM22_RS15130 PF07995 Glucose / Sorbosone dehydrogenase DOM22_RS15135 PF09382 RQC domain DOM22_RS15135 PF00570 HRDC domain DOM22_RS15135 PF00270 DEAD/DEAH box helicase DOM22_RS15135 PF00271 Helicase conserved C-terminal domain DOM22_RS15135 PF16124 RecQ zinc-binding DOM22_RS15140 PF03764 Elongation factor G, domain IV DOM22_RS15140 PF14492 Elongation Factor G, domain II DOM22_RS15140 PF00679 Elongation factor G C-terminus DOM22_RS15140 PF00009 Elongation factor Tu GTP binding domain DOM22_RS15140 PF03144 Elongation factor Tu domain 2 DOM22_RS15200 PF00571 CBS domain DOM22_RS15200 PF01595 Cyclin M transmembrane N-terminal domain DOM22_RS15205 PF03091 CutA1 divalent ion tolerance protein DOM22_RS15210 PF00156 Phosphoribosyl transferase domain DOM22_RS15225 PF02780 Transketolase, C-terminal domain DOM22_RS15225 PF02779 Transketolase, pyrimidine binding domain DOM22_RS15285 PF17804 Tail specific protease N-terminal domain DOM22_RS15285 PF03572 Peptidase family S41 DOM22_RS15285 PF00595 PDZ domain DOM22_RS15285 PF11818 C-terminal domain of tail specific protease (DUF3340) DOM22_RS15300 PF13462 Thioredoxin DOM22_RS15300 PF06965 Na+/H+ antiporter 1 DOM22_RS15315 PF13368 Topoisomerase C-terminal repeat DOM22_RS15315 PF01751 Toprim domain DOM22_RS15315 PF01131 DNA topoisomerase DOM22_RS15330 PF01523 Putative modulator of DNA gyrase DOM22_RS15335 PF01523 Putative modulator of DNA gyrase DOM22_RS15355 PF01965 DJ-1/PfpI family DOM22_RS15375 PF16921 Tex protein YqgF-like domain DOM22_RS15375 PF00575 S1 RNA binding domain DOM22_RS15375 PF17674 HHH domain DOM22_RS15375 PF09371 Tex-like protein N-terminal domain DOM22_RS15380 PF01176 Translation initiation factor 1A / IF-1 DOM22_RS15390 PF00132 Bacterial transferase hexapeptide (six repeats) DOM22_RS15390 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DOM22_RS15400 PF00672 HAMP domain DOM22_RS15400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS15400 PF02203 Tar ligand binding domain homologue DOM22_RS15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS15410 PF01627 Hpt domain DOM22_RS15410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOM22_RS15410 PF00672 HAMP domain DOM22_RS15410 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS15410 PF00072 Response regulator receiver domain DOM22_RS15420 PF01170 Putative RNA methylase family UPF0020 DOM22_RS15420 PF02926 THUMP domain DOM22_RS15420 PF10672 S-adenosylmethionine-dependent methyltransferase DOM22_RS15435 PF00795 Carbon-nitrogen hydrolase DOM22_RS15450 PF00830 Ribosomal L28 family DOM22_RS15455 PF01084 Ribosomal protein S18 DOM22_RS15490 PF02817 e3 binding domain DOM22_RS15490 PF00364 Biotin-requiring enzyme DOM22_RS15490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DOM22_RS15515 PF08338 Domain of unknown function (DUF1731) DOM22_RS15515 PF01370 NAD dependent epimerase/dehydratase family DOM22_RS15520 PF03150 Di-haem cytochrome c peroxidase DOM22_RS15520 PF00034 Cytochrome c DOM22_RS15535 PF06826 Predicted Permease Membrane Region DOM22_RS15540 PF00155 Aminotransferase class I and II DOM22_RS15545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DOM22_RS15550 PF00873 AcrB/AcrD/AcrF family DOM22_RS15555 PF02321 Outer membrane efflux protein DOM22_RS15560 PF17763 Glutaminase/Asparaginase C-terminal domain DOM22_RS15560 PF00710 Asparaginase, N-terminal DOM22_RS15570 PF01734 Patatin-like phospholipase DOM22_RS15605 PF12706 Beta-lactamase superfamily domain DOM22_RS15610 PF00561 alpha/beta hydrolase fold DOM22_RS15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS15615 PF03466 LysR substrate binding domain DOM22_RS15625 PF00005 ABC transporter DOM22_RS15625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DOM22_RS15650 PF00072 Response regulator receiver domain DOM22_RS15650 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS15655 PF00672 HAMP domain DOM22_RS15655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOM22_RS15655 PF01627 Hpt domain DOM22_RS15655 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS15655 PF00072 Response regulator receiver domain DOM22_RS15680 PF01329 Pterin 4 alpha carbinolamine dehydratase DOM22_RS15690 PF00700 Bacterial flagellin C-terminal helical region DOM22_RS15690 PF00669 Bacterial flagellin N-terminal helical region DOM22_RS15695 PF00005 ABC transporter DOM22_RS15700 PF00005 ABC transporter DOM22_RS15700 PF12399 Branched-chain amino acid ATP-binding cassette transporter DOM22_RS15705 PF02653 Branched-chain amino acid transport system / permease component DOM22_RS15710 PF13458 Periplasmic binding protein DOM22_RS15725 PF13488 Glycine zipper DOM22_RS15725 PF00691 OmpA family DOM22_RS15785 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS15785 PF16193 AAA C-terminal domain DOM22_RS15785 PF12002 MgsA AAA+ ATPase C terminal DOM22_RS15800 PF00263 Bacterial type II and III secretion system protein DOM22_RS15800 PF11741 AMIN domain DOM22_RS15800 PF07660 Secretin and TonB N terminus short domain DOM22_RS15800 PF03958 Bacterial type II/III secretion system short domain DOM22_RS15825 PF06750 Bacterial Peptidase A24 N-terminal domain DOM22_RS15825 PF01478 Type IV leader peptidase family DOM22_RS15835 PF00005 ABC transporter DOM22_RS15845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOM22_RS15845 PF02142 MGS-like domain DOM22_RS15845 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DOM22_RS15855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DOM22_RS15855 PF00117 Glutamine amidotransferase class-I DOM22_RS15860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DOM22_RS15860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DOM22_RS15865 PF10502 Signal peptidase, peptidase S26 DOM22_RS15875 PF10502 Signal peptidase, peptidase S26 DOM22_RS15880 PF10502 Signal peptidase, peptidase S26 DOM22_RS15885 PF00009 Elongation factor Tu GTP binding domain DOM22_RS15885 PF00679 Elongation factor G C-terminus DOM22_RS15885 PF06421 GTP-binding protein LepA C-terminus DOM22_RS15885 PF03144 Elongation factor Tu domain 2 DOM22_RS15890 PF02772 S-adenosylmethionine synthetase, central domain DOM22_RS15890 PF02773 S-adenosylmethionine synthetase, C-terminal domain DOM22_RS15890 PF00438 S-adenosylmethionine synthetase, N-terminal domain DOM22_RS15895 PF00672 HAMP domain DOM22_RS15895 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS15905 PF01048 Phosphorylase superfamily DOM22_RS15910 PF00156 Phosphoribosyl transferase domain DOM22_RS15915 PF00309 Sigma-54 factor, Activator interacting domain (AID) DOM22_RS15915 PF04963 Sigma-54 factor, core binding domain DOM22_RS15915 PF04552 Sigma-54, DNA binding domain DOM22_RS15920 PF00005 ABC transporter DOM22_RS15940 PF01618 MotA/TolQ/ExbB proton channel family DOM22_RS15990 PF00571 CBS domain DOM22_RS15990 PF01380 SIS domain DOM22_RS15995 PF06418 CTP synthase N-terminus DOM22_RS15995 PF00117 Glutamine amidotransferase class-I DOM22_RS16000 PF02348 Cytidylyltransferase DOM22_RS16005 PF01926 50S ribosome-binding GTPase DOM22_RS16010 PF00072 Response regulator receiver domain DOM22_RS16010 PF00158 Sigma-54 interaction domain DOM22_RS16010 PF02954 Bacterial regulatory protein, Fis family DOM22_RS16025 PF01367 5'-3' exonuclease, C-terminal SAM fold DOM22_RS16025 PF00476 DNA polymerase family A DOM22_RS16025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DOM22_RS16045 PF00113 Enolase, C-terminal TIM barrel domain DOM22_RS16045 PF03952 Enolase, N-terminal domain DOM22_RS16055 PF00437 Type II/IV secretion system protein DOM22_RS16075 PF13462 Thioredoxin DOM22_RS16075 PF06965 Na+/H+ antiporter 1 DOM22_RS16110 PF00691 OmpA family DOM22_RS16110 PF13677 Membrane MotB of proton-channel complex MotA/MotB DOM22_RS16155 PF04773 FecR protein DOM22_RS16220 PF17746 SfsA N-terminal OB domain DOM22_RS16220 PF03749 Sugar fermentation stimulation protein RE domain DOM22_RS16225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DOM22_RS16225 PF02817 e3 binding domain DOM22_RS16225 PF00364 Biotin-requiring enzyme DOM22_RS16230 PF07992 Pyridine nucleotide-disulphide oxidoreductase DOM22_RS16230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DOM22_RS16240 PF02803 Thiolase, C-terminal domain DOM22_RS16240 PF00108 Thiolase, N-terminal domain DOM22_RS16245 PF16925 Tetracyclin repressor-like, C-terminal domain DOM22_RS16245 PF00440 Bacterial regulatory proteins, tetR family DOM22_RS16270 PF01575 MaoC like domain DOM22_RS16275 PF02562 PhoH-like protein DOM22_RS16275 PF13638 PIN domain DOM22_RS16290 PF01641 SelR domain DOM22_RS16305 PF04542 Sigma-70 region 2 DOM22_RS16305 PF08281 Sigma-70, region 4 DOM22_RS16360 PF08308 PEGA domain DOM22_RS16360 PF00069 Protein kinase domain DOM22_RS16365 PF00990 Diguanylate cyclase, GGDEF domain DOM22_RS16375 PF03714 Bacterial pullanase-associated domain DOM22_RS16375 PF18494 Pullulanase Ins domain DOM22_RS16375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DOM22_RS16375 PF11852 Domain of unknown function (DUF3372) DOM22_RS16375 PF17967 Pullulanase N2 domain DOM22_RS16380 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS16385 PF00528 Binding-protein-dependent transport system inner membrane component DOM22_RS16390 PF17912 MalK OB fold domain DOM22_RS16390 PF00005 ABC transporter DOM22_RS16395 PF00128 Alpha amylase, catalytic domain DOM22_RS16395 PF02806 Alpha amylase, C-terminal all-beta domain DOM22_RS16400 PF00480 ROK family DOM22_RS16410 PF00342 Phosphoglucose isomerase DOM22_RS16425 PF01047 MarR family DOM22_RS16430 PF02566 OsmC-like protein DOM22_RS16440 PF04055 Radical SAM superfamily DOM22_RS16450 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DOM22_RS16460 PF01467 Cytidylyltransferase-like DOM22_RS16460 PF00294 pfkB family carbohydrate kinase DOM22_RS16475 PF05199 GMC oxidoreductase DOM22_RS16485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DOM22_RS16485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DOM22_RS16490 PF01180 Dihydroorotate dehydrogenase DOM22_RS16495 PF00293 NUDIX domain DOM22_RS16510 PF00216 Bacterial DNA-binding protein DOM22_RS16515 PF00152 tRNA synthetases class II (D, K and N) DOM22_RS16515 PF01336 OB-fold nucleic acid binding domain DOM22_RS16540 PF01381 Helix-turn-helix DOM22_RS16550 PF01523 Putative modulator of DNA gyrase DOM22_RS16580 PF02347 Glycine cleavage system P-protein DOM22_RS16610 PF01597 Glycine cleavage H-protein DOM22_RS16615 PF08669 Glycine cleavage T-protein C-terminal barrel domain DOM22_RS16615 PF01571 Aminomethyltransferase folate-binding domain DOM22_RS16655 PF18698 Histidine kinase sensor domain DOM22_RS16655 PF00672 HAMP domain DOM22_RS16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS16655 PF00989 PAS fold DOM22_RS16655 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS16675 PF00072 Response regulator receiver domain DOM22_RS16675 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS16685 PF01627 Hpt domain DOM22_RS16685 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS16685 PF00672 HAMP domain DOM22_RS16685 PF17149 Periplasmic sensor domain found in signal transduction proteins DOM22_RS16685 PF00072 Response regulator receiver domain DOM22_RS16685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS16690 PF02580 D-Tyr-tRNA(Tyr) deacylase DOM22_RS16730 PF07075 Protein of unknown function (DUF1343) DOM22_RS16760 PF00296 Luciferase-like monooxygenase DOM22_RS16785 PF07669 Eco57I restriction-modification methylase DOM22_RS16790 PF09587 Bacterial capsule synthesis protein PGA_cap DOM22_RS16800 PF03641 Possible lysine decarboxylase DOM22_RS16810 PF00271 Helicase conserved C-terminal domain DOM22_RS16810 PF00270 DEAD/DEAH box helicase DOM22_RS16815 PF13167 GTP-binding GTPase N-terminal DOM22_RS16815 PF16360 GTP-binding GTPase Middle Region DOM22_RS16815 PF01926 50S ribosome-binding GTPase DOM22_RS16825 PF07690 Major Facilitator Superfamily DOM22_RS16830 PF03006 Haemolysin-III related DOM22_RS16840 PF00293 NUDIX domain DOM22_RS16855 PF03853 YjeF-related protein N-terminus DOM22_RS16855 PF01256 Carbohydrate kinase DOM22_RS16860 PF00557 Metallopeptidase family M24 DOM22_RS16880 PF07690 Major Facilitator Superfamily DOM22_RS16885 PF13533 Biotin-lipoyl like DOM22_RS16895 PF01047 MarR family DOM22_RS16910 PF01728 FtsJ-like methyltransferase DOM22_RS16910 PF18125 RlmM ferredoxin-like domain DOM22_RS16940 PF01668 SmpB protein DOM22_RS16945 PF00398 Ribosomal RNA adenine dimethylase DOM22_RS16950 PF00814 Glycoprotease family DOM22_RS16965 PF00691 OmpA family DOM22_RS17020 PF00158 Sigma-54 interaction domain DOM22_RS17020 PF00072 Response regulator receiver domain DOM22_RS17020 PF02954 Bacterial regulatory protein, Fis family DOM22_RS17025 PF04972 BON domain DOM22_RS17025 PF00263 Bacterial type II and III secretion system protein DOM22_RS17025 PF13629 Pilus formation protein N terminal region DOM22_RS17030 PF00437 Type II/IV secretion system protein DOM22_RS17050 PF01336 OB-fold nucleic acid binding domain DOM22_RS17050 PF02938 GAD domain DOM22_RS17050 PF00152 tRNA synthetases class II (D, K and N) DOM22_RS17060 PF04545 Sigma-70, region 4 DOM22_RS17060 PF00140 Sigma-70 factor, region 1.2 DOM22_RS17060 PF04542 Sigma-70 region 2 DOM22_RS17075 PF04545 Sigma-70, region 4 DOM22_RS17075 PF04539 Sigma-70 region 3 DOM22_RS17075 PF04542 Sigma-70 region 2 DOM22_RS17080 PF10609 NUBPL iron-transfer P-loop NTPase DOM22_RS17085 PF00448 SRP54-type protein, GTPase domain DOM22_RS17090 PF00771 FHIPEP family DOM22_RS17095 PF01312 FlhB HrpN YscU SpaS Family DOM22_RS17100 PF01311 Bacterial export proteins, family 1 DOM22_RS17105 PF01313 Bacterial export proteins, family 3 DOM22_RS17110 PF00813 FliP family DOM22_RS17120 PF04509 CheC-like family DOM22_RS17120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DOM22_RS17125 PF02154 Flagellar motor switch protein FliM DOM22_RS17125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DOM22_RS17150 PF00459 Inositol monophosphatase family DOM22_RS17175 PF00580 UvrD/REP helicase N-terminal domain DOM22_RS17175 PF13361 UvrD-like helicase C-terminal domain DOM22_RS17190 PF12544 Lysine-2,3-aminomutase DOM22_RS17190 PF04055 Radical SAM superfamily DOM22_RS17225 PF00166 Chaperonin 10 Kd subunit DOM22_RS17230 PF00905 Penicillin binding protein transpeptidase domain DOM22_RS17230 PF00912 Transglycosylase DOM22_RS17230 PF14814 Bifunctional transglycosylase second domain DOM22_RS17235 PF00753 Metallo-beta-lactamase superfamily DOM22_RS17245 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS17245 PF13493 Domain of unknown function (DUF4118) DOM22_RS17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS17245 PF02702 Osmosensitive K+ channel His kinase sensor domain DOM22_RS17250 PF00158 Sigma-54 interaction domain DOM22_RS17250 PF02954 Bacterial regulatory protein, Fis family DOM22_RS17250 PF00072 Response regulator receiver domain DOM22_RS17260 PF01252 Signal peptidase (SPase) II DOM22_RS17275 PF00072 Response regulator receiver domain DOM22_RS17280 PF00672 HAMP domain DOM22_RS17280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS17280 PF00989 PAS fold DOM22_RS17280 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS17290 PF01297 Zinc-uptake complex component A periplasmic DOM22_RS17295 PF00005 ABC transporter DOM22_RS17310 PF01790 Prolipoprotein diacylglyceryl transferase DOM22_RS17320 PF03884 DNA gyrase inhibitor YacG DOM22_RS17325 PF00216 Bacterial DNA-binding protein DOM22_RS17330 PF00365 Phosphofructokinase DOM22_RS17335 PF13458 Periplasmic binding protein DOM22_RS17340 PF02653 Branched-chain amino acid transport system / permease component DOM22_RS17345 PF11862 Domain of unknown function (DUF3382) DOM22_RS17345 PF02653 Branched-chain amino acid transport system / permease component DOM22_RS17350 PF00005 ABC transporter DOM22_RS17350 PF12399 Branched-chain amino acid ATP-binding cassette transporter DOM22_RS17355 PF00005 ABC transporter DOM22_RS17375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS17375 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS17380 PF00072 Response regulator receiver domain DOM22_RS17380 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS17385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM22_RS17385 PF07559 Flagellar basal body protein FlaE DOM22_RS17385 PF00460 Flagella basal body rod protein DOM22_RS17395 PF03963 Flagellar hook capping protein - N-terminal region DOM22_RS17395 PF13860 FlgD Ig-like domain DOM22_RS17395 PF13861 FlgD Tudor-like domain DOM22_RS17415 PF18269 T3SS EscN ATPase C-terminal domain DOM22_RS17415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOM22_RS17415 PF02874 ATP synthase alpha/beta family, beta-barrel domain DOM22_RS17420 PF02108 Flagellar assembly protein FliH DOM22_RS17425 PF01706 FliG C-terminal domain DOM22_RS17425 PF14841 FliG middle domain DOM22_RS17425 PF14842 FliG N-terminal domain DOM22_RS17430 PF08345 Flagellar M-ring protein C-terminal DOM22_RS17430 PF01514 Secretory protein of YscJ/FliF family DOM22_RS17435 PF02049 Flagellar hook-basal body complex protein FliE DOM22_RS17440 PF00460 Flagella basal body rod protein DOM22_RS17440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DOM22_RS17445 PF00460 Flagella basal body rod protein DOM22_RS17450 PF00158 Sigma-54 interaction domain DOM22_RS17450 PF02954 Bacterial regulatory protein, Fis family DOM22_RS17465 PF02405 Permease MlaE DOM22_RS17470 PF00005 ABC transporter DOM22_RS17495 PF01134 Glucose inhibited division protein A DOM22_RS17515 PF00265 Thymidine kinase DOM22_RS17520 PF01464 Transglycosylase SLT domain DOM22_RS17520 PF00497 Bacterial extracellular solute-binding proteins, family 3 DOM22_RS17530 PF01380 SIS domain DOM22_RS17535 PF12804 MobA-like NTP transferase domain DOM22_RS17535 PF00132 Bacterial transferase hexapeptide (six repeats) DOM22_RS17540 PF00246 Zinc carboxypeptidase DOM22_RS17555 PF00072 Response regulator receiver domain DOM22_RS17555 PF02954 Bacterial regulatory protein, Fis family DOM22_RS17555 PF00158 Sigma-54 interaction domain DOM22_RS17560 PF13091 PLD-like domain DOM22_RS17560 PF13396 Phospholipase_D-nuclease N-terminal DOM22_RS17570 PF00491 Arginase family DOM22_RS17575 PF00633 Helix-hairpin-helix motif DOM22_RS17575 PF00730 HhH-GPD superfamily base excision DNA repair protein DOM22_RS17575 PF14815 NUDIX domain DOM22_RS17600 PF00490 Delta-aminolevulinic acid dehydratase DOM22_RS17610 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DOM22_RS17610 PF03900 Porphobilinogen deaminase, C-terminal domain DOM22_RS17615 PF00202 Aminotransferase class-III DOM22_RS17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS17620 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS17625 PF00486 Transcriptional regulatory protein, C terminal DOM22_RS17625 PF00072 Response regulator receiver domain DOM22_RS17630 PF01208 Uroporphyrinogen decarboxylase (URO-D) DOM22_RS17635 PF06969 HemN C-terminal domain DOM22_RS17635 PF04055 Radical SAM superfamily DOM22_RS17640 PF01593 Flavin containing amine oxidoreductase DOM22_RS17645 PF00762 Ferrochelatase DOM22_RS17665 PF00271 Helicase conserved C-terminal domain DOM22_RS17665 PF00270 DEAD/DEAH box helicase DOM22_RS17665 PF12300 ATP-dependent RNA helicase RhlB DOM22_RS17670 PF12697 Alpha/beta hydrolase family DOM22_RS17675 PF12626 Polymerase A arginine-rich C-terminus DOM22_RS17675 PF01743 Poly A polymerase head domain DOM22_RS17675 PF12627 Probable RNA and SrmB- binding site of polymerase A DOM22_RS17680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DOM22_RS17680 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS17680 PF00672 HAMP domain DOM22_RS17680 PF01627 Hpt domain DOM22_RS17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS17680 PF00072 Response regulator receiver domain DOM22_RS17685 PF00072 Response regulator receiver domain DOM22_RS17685 PF01339 CheB methylesterase DOM22_RS17690 PF03705 CheR methyltransferase, all-alpha domain DOM22_RS17690 PF01739 CheR methyltransferase, SAM binding domain DOM22_RS17695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS17695 PF02895 Signal transducing histidine kinase, homodimeric domain DOM22_RS17695 PF01627 Hpt domain DOM22_RS17695 PF09078 CheY binding DOM22_RS17695 PF01584 CheW-like domain DOM22_RS17700 PF01584 CheW-like domain DOM22_RS17710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DOM22_RS17715 PF02780 Transketolase, C-terminal domain DOM22_RS17715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DOM22_RS17715 PF02779 Transketolase, pyrimidine binding domain DOM22_RS17720 PF00962 Adenosine/AMP deaminase DOM22_RS17730 PF00561 alpha/beta hydrolase fold DOM22_RS17745 PF12697 Alpha/beta hydrolase family DOM22_RS17750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DOM22_RS17755 PF00425 chorismate binding enzyme DOM22_RS17760 PF01817 Chorismate mutase type II DOM22_RS17760 PF00793 DAHP synthetase I family DOM22_RS17765 PF01209 ubiE/COQ5 methyltransferase family DOM22_RS17775 PF01814 Hemerythrin HHE cation binding domain DOM22_RS17780 PF01063 Amino-transferase class IV DOM22_RS17790 PF00378 Enoyl-CoA hydratase/isomerase DOM22_RS17795 PF01264 Chorismate synthase DOM22_RS17800 PF01202 Shikimate kinase DOM22_RS17805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DOM22_RS17810 PF01761 3-dehydroquinate synthase DOM22_RS17820 PF03167 Uracil DNA glycosylase superfamily DOM22_RS17860 PF00717 Peptidase S24-like DOM22_RS17860 PF01726 LexA DNA binding domain DOM22_RS17885 PF01258 Prokaryotic dksA/traR C4-type zinc finger DOM22_RS17895 PF00440 Bacterial regulatory proteins, tetR family DOM22_RS17900 PF03793 PASTA domain DOM22_RS17900 PF03717 Penicillin-binding Protein dimerisation domain DOM22_RS17900 PF00905 Penicillin binding protein transpeptidase domain DOM22_RS17915 PF03372 Endonuclease/Exonuclease/phosphatase family DOM22_RS17940 PF01471 Putative peptidoglycan binding domain DOM22_RS17940 PF03572 Peptidase family S41 DOM22_RS17940 PF17820 PDZ domain DOM22_RS17945 PF01370 NAD dependent epimerase/dehydratase family DOM22_RS17975 PF01872 RibD C-terminal domain DOM22_RS17975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DOM22_RS17980 PF05970 PIF1-like helicase DOM22_RS17990 PF00581 Rhodanese-like domain DOM22_RS18025 PF02548 Ketopantoate hydroxymethyltransferase DOM22_RS18030 PF02569 Pantoate-beta-alanine ligase DOM22_RS18035 PF04127 DNA / pantothenate metabolism flavoprotein DOM22_RS18035 PF02441 Flavoprotein DOM22_RS18040 PF03309 Type III pantothenate kinase DOM22_RS18045 PF02261 Aspartate decarboxylase DOM22_RS18065 PF04463 Protein of unknown function (DUF523) DOM22_RS18070 PF00005 ABC transporter DOM22_RS18070 PF12848 ABC transporter DOM22_RS18085 PF12848 ABC transporter DOM22_RS18085 PF00005 ABC transporter DOM22_RS18085 PF16326 ABC transporter C-terminal domain DOM22_RS18100 PF00682 HMGL-like DOM22_RS18105 PF00364 Biotin-requiring enzyme DOM22_RS18110 PF00289 Biotin carboxylase, N-terminal domain DOM22_RS18110 PF02785 Biotin carboxylase C-terminal domain DOM22_RS18110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOM22_RS18115 PF00892 EamA-like transporter family DOM22_RS18120 PF00378 Enoyl-CoA hydratase/isomerase DOM22_RS18125 PF01039 Carboxyl transferase domain DOM22_RS18155 PF00005 ABC transporter DOM22_RS18185 PF03441 FAD binding domain of DNA photolyase DOM22_RS18185 PF00875 DNA photolyase DOM22_RS18195 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS18195 PF01627 Hpt domain DOM22_RS18195 PF17149 Periplasmic sensor domain found in signal transduction proteins DOM22_RS18195 PF00072 Response regulator receiver domain DOM22_RS18195 PF00672 HAMP domain DOM22_RS18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS18205 PF10672 S-adenosylmethionine-dependent methyltransferase DOM22_RS18205 PF01170 Putative RNA methylase family UPF0020 DOM22_RS18210 PF17284 Spermidine synthase tetramerisation domain DOM22_RS18215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DOM22_RS18215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DOM22_RS18245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS18245 PF03466 LysR substrate binding domain DOM22_RS18255 PF04389 Peptidase family M28 DOM22_RS18285 PF00571 CBS domain DOM22_RS18290 PF00579 tRNA synthetases class I (W and Y) DOM22_RS18295 PF13460 NAD(P)H-binding DOM22_RS18295 PF11066 Protein of unknown function (DUF2867) DOM22_RS18300 PF00570 HRDC domain DOM22_RS18300 PF00271 Helicase conserved C-terminal domain DOM22_RS18300 PF00270 DEAD/DEAH box helicase DOM22_RS18300 PF16124 RecQ zinc-binding DOM22_RS18300 PF09382 RQC domain DOM22_RS18305 PF00248 Aldo/keto reductase family DOM22_RS18330 PF00005 ABC transporter DOM22_RS18330 PF12848 ABC transporter DOM22_RS18365 PF00654 Voltage gated chloride channel DOM22_RS18375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DOM22_RS18400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS18400 PF03466 LysR substrate binding domain DOM22_RS18405 PF02678 Pirin DOM22_RS18405 PF17954 Quercetinase C-terminal cupin domain DOM22_RS18415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DOM22_RS18425 PF00672 HAMP domain DOM22_RS18425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DOM22_RS18425 PF02203 Tar ligand binding domain homologue DOM22_RS18430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DOM22_RS18430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DOM22_RS18450 PF03372 Endonuclease/Exonuclease/phosphatase family DOM22_RS18455 PF05368 NmrA-like family DOM22_RS18460 PF01638 HxlR-like helix-turn-helix DOM22_RS18485 PF00011 Hsp20/alpha crystallin family DOM22_RS18490 PF04227 Indigoidine synthase A like protein DOM22_RS18500 PF02350 UDP-N-acetylglucosamine 2-epimerase DOM22_RS18510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DOM22_RS18510 PF13632 Glycosyl transferase family group 2 DOM22_RS18555 PF00141 Peroxidase DOM22_RS18575 PF03167 Uracil DNA glycosylase superfamily DOM22_RS18580 PF08818 Domain of unknown function (DU1801) DOM22_RS18610 PF12697 Alpha/beta hydrolase family DOM22_RS18620 PF01022 Bacterial regulatory protein, arsR family DOM22_RS18655 PF16859 Tetracyclin repressor-like, C-terminal domain DOM22_RS18655 PF00440 Bacterial regulatory proteins, tetR family DOM22_RS18660 PF00106 short chain dehydrogenase DOM22_RS18665 PF00107 Zinc-binding dehydrogenase DOM22_RS18665 PF08240 Alcohol dehydrogenase GroES-like domain DOM22_RS18670 PF00106 short chain dehydrogenase DOM22_RS18675 PF17932 Tetracyclin repressor-like, C-terminal domain DOM22_RS18675 PF00440 Bacterial regulatory proteins, tetR family DOM22_RS18680 PF07859 alpha/beta hydrolase fold DOM22_RS18680 PF00331 Glycosyl hydrolase family 10 DOM22_RS18685 PF14480 DNA polymerase III polC-type N-terminus I DOM22_RS18685 PF11490 DNA polymerase III polC-type N-terminus II DOM22_RS18685 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOM22_RS18685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOM22_RS18685 PF14579 Helix-hairpin-helix motif DOM22_RS18685 PF02811 PHP domain DOM22_RS18685 PF00929 Exonuclease DOM22_RS18730 PF01636 Phosphotransferase enzyme family DOM22_RS18745 PF00180 Isocitrate/isopropylmalate dehydrogenase DOM22_RS18760 PF16363 GDP-mannose 4,6 dehydratase DOM22_RS18765 PF02780 Transketolase, C-terminal domain DOM22_RS18765 PF02779 Transketolase, pyrimidine binding domain DOM22_RS18770 PF00456 Transketolase, thiamine diphosphate binding domain DOM22_RS18775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DOM22_RS18780 PF06969 HemN C-terminal domain DOM22_RS18780 PF04055 Radical SAM superfamily DOM22_RS18790 PF00535 Glycosyl transferase family 2 DOM22_RS18805 PF01370 NAD dependent epimerase/dehydratase family DOM22_RS18840 PF04264 YceI-like domain DOM22_RS18865 PF12169 DNA polymerase III subunits gamma and tau domain III DOM22_RS18870 PF02575 YbaB/EbfC DNA-binding family DOM22_RS18875 PF13662 Toprim domain DOM22_RS18875 PF02132 RecR protein DOM22_RS18880 PF00025 ADP-ribosylation factor family DOM22_RS18895 PF02445 Quinolinate synthetase A protein DOM22_RS18945 PF03466 LysR substrate binding domain DOM22_RS18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DOM22_RS18950 PF00107 Zinc-binding dehydrogenase DOM22_RS18950 PF08240 Alcohol dehydrogenase GroES-like domain DOM22_RS18955 PF00756 Putative esterase DOM22_RS18970 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS18970 PF05362 Lon protease (S16) C-terminal proteolytic domain DOM22_RS18970 PF02190 ATP-dependent protease La (LON) substrate-binding domain DOM22_RS18975 PF02743 Cache domain DOM22_RS18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DOM22_RS18975 PF00512 His Kinase A (phospho-acceptor) domain DOM22_RS18980 PF00158 Sigma-54 interaction domain DOM22_RS18980 PF00072 Response regulator receiver domain DOM22_RS18990 PF07724 AAA domain (Cdc48 subfamily) DOM22_RS18990 PF10431 C-terminal, D2-small domain, of ClpB protein DOM22_RS18990 PF06689 ClpX C4-type zinc finger DOM22_RS18995 PF00574 Clp protease DOM22_RS19000 PF02789 Cytosol aminopeptidase family, N-terminal domain DOM22_RS19000 PF00883 Cytosol aminopeptidase family, catalytic domain DOM22_RS19005 PF13091 PLD-like domain DOM22_RS19030 PF02374 Anion-transporting ATPase DOM22_RS19035 PF02374 Anion-transporting ATPase DOM22_RS19040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DOM22_RS19040 PF05698 Bacterial trigger factor protein (TF) C-terminus DOM22_RS19040 PF05697 Bacterial trigger factor protein (TF) DOM22_RS19055 PF00561 alpha/beta hydrolase fold DOM22_RS19065 PF03572 Peptidase family S41 DOM22_RS19065 PF13180 PDZ domain DOM22_RS19075 PF18075 FtsX extracellular domain DOM22_RS19080 PF00005 ABC transporter DOM22_RS19095 PF01741 Large-conductance mechanosensitive channel, MscL DOM22_RS19105 PF00905 Penicillin binding protein transpeptidase domain DOM22_RS19105 PF00912 Transglycosylase DOM22_RS19105 PF17092 Penicillin-binding protein OB-like domain DOM22_RS19110 PF00005 ABC transporter DOM22_RS19110 PF17755 UvrA DNA-binding domain DOM22_RS19110 PF17760 UvrA interaction domain DOM22_RS19115 PF00664 ABC transporter transmembrane region DOM22_RS19115 PF00005 ABC transporter DOM22_RS19125 PF00158 Sigma-54 interaction domain DOM22_RS19125 PF01590 GAF domain DOM22_RS19125 PF02954 Bacterial regulatory protein, Fis family DOM22_RS19135 PF01636 Phosphotransferase enzyme family DOM22_RS19140 PF00132 Bacterial transferase hexapeptide (six repeats) DOM22_RS19140 PF12804 MobA-like NTP transferase domain DOM22_RS19165 PF00933 Glycosyl hydrolase family 3 N terminal domain DOM22_RS19165 PF01915 Glycosyl hydrolase family 3 C-terminal domain DOM22_RS19190 PF00483 Nucleotidyl transferase DOM22_RS19200 PF04851 Type III restriction enzyme, res subunit DOM22_RS19200 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DOM22_RS19200 PF18074 Primosomal protein N C-terminal domain DOM22_RS19200 PF17764 3′ DNA-binding domain (3′BD) DOM22_RS19200 PF00271 Helicase conserved C-terminal domain DOM22_RS19215 PF00318 Ribosomal protein S2 DOM22_RS19220 PF00889 Elongation factor TS DOM22_RS19225 PF00696 Amino acid kinase family DOM22_RS19230 PF01765 Ribosome recycling factor DOM22_RS19235 PF01255 Putative undecaprenyl diphosphate synthase DOM22_RS19245 PF02163 Peptidase family M50 DOM22_RS19245 PF17820 PDZ domain DOM22_RS19250 PF00814 Glycoprotease family DOM22_RS19265 PF00849 RNA pseudouridylate synthase DOM22_RS19270 PF02578 Multi-copper polyphenol oxidoreductase laccase DOM22_RS19275 PF02245 Methylpurine-DNA glycosylase (MPG) DOM22_RS19280 PF00210 Ferritin-like domain DOM22_RS19290 PF01053 Cys/Met metabolism PLP-dependent enzyme DOM22_RS19295 PF00571 CBS domain DOM22_RS19295 PF00291 Pyridoxal-phosphate dependent enzyme DOM22_RS19330 PF02405 Permease MlaE DOM22_RS19335 PF02405 Permease MlaE DOM22_RS19340 PF00005 ABC transporter DOM22_RS19345 PF00005 ABC transporter DOM22_RS19350 PF00549 CoA-ligase DOM22_RS19350 PF08442 ATP-grasp domain DOM22_RS19355 PF00549 CoA-ligase DOM22_RS19355 PF02629 CoA binding domain DOM22_RS19380 PF13180 PDZ domain DOM22_RS19380 PF17820 PDZ domain DOM22_RS19395 PF00334 Nucleoside diphosphate kinase DOM22_RS19400 PF05958 tRNA (Uracil-5-)-methyltransferase DOM22_RS19410 PF13464 Domain of unknown function (DUF4115) DOM22_RS19425 PF00970 Oxidoreductase FAD-binding domain DOM22_RS19425 PF00111 2Fe-2S iron-sulfur cluster binding domain DOM22_RS19425 PF00175 Oxidoreductase NAD-binding domain DOM22_RS19430 PF14579 Helix-hairpin-helix motif DOM22_RS19430 PF02811 PHP domain DOM22_RS19430 PF00929 Exonuclease DOM22_RS19430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DOM22_RS19430 PF07733 Bacterial DNA polymerase III alpha NTPase domain DOM22_RS19430 PF11490 DNA polymerase III polC-type N-terminus II DOM22_RS19430 PF14480 DNA polymerase III polC-type N-terminus I DOM22_RS19435 PF00795 Carbon-nitrogen hydrolase DOM22_RS19435 PF02540 NAD synthase DOM22_RS19455 PF00919 Uncharacterized protein family UPF0004 DOM22_RS19455 PF18693 TRAM domain DOM22_RS19455 PF04055 Radical SAM superfamily DOM22_RS19470 PF02590 Predicted SPOUT methyltransferase DOM22_RS19475 PF01467 Cytidylyltransferase-like DOM22_RS19480 PF01018 GTP1/OBG DOM22_RS19480 PF01926 50S ribosome-binding GTPase DOM22_RS19485 PF01016 Ribosomal L27 protein DOM22_RS19490 PF00829 Ribosomal prokaryotic L21 protein DOM22_RS19500 PF00575 S1 RNA binding domain DOM22_RS19500 PF10150 Ribonuclease E/G family DOM22_RS19505 PF00437 Type II/IV secretion system protein DOM22_RS19510 PF01791 DeoC/LacD family aldolase DOM22_RS19515 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DOM22_RS19515 PF00591 Glycosyl transferase family, a/b domain DOM22_RS19515 PF02885 Glycosyl transferase family, helical bundle domain DOM22_RS19520 PF01048 Phosphorylase superfamily DOM22_RS19530 PF00082 Subtilase family DOM22_RS19535 PF01039 Carboxyl transferase domain DOM22_RS19540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOM22_RS19540 PF00289 Biotin carboxylase, N-terminal domain DOM22_RS19540 PF02785 Biotin carboxylase C-terminal domain DOM22_RS19545 PF00682 HMGL-like DOM22_RS19545 PF00364 Biotin-requiring enzyme DOM22_RS19545 PF02436 Conserved carboxylase domain DOM22_RS19545 PF00289 Biotin carboxylase, N-terminal domain DOM22_RS19545 PF02785 Biotin carboxylase C-terminal domain DOM22_RS19545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DOM22_RS19550 PF00902 Sec-independent protein translocase protein (TatC) DOM22_RS19555 PF02416 mttA/Hcf106 family DOM22_RS19570 PF00675 Insulinase (Peptidase family M16) DOM22_RS19570 PF05193 Peptidase M16 inactive domain DOM22_RS19575 PF04055 Radical SAM superfamily DOM22_RS19580 PF01025 GrpE DOM22_RS19585 PF01556 DnaJ C terminal domain DOM22_RS19585 PF00226 DnaJ domain DOM22_RS19585 PF00684 DnaJ central domain DOM22_RS19605 PF02190 ATP-dependent protease La (LON) substrate-binding domain DOM22_RS19605 PF05362 Lon protease (S16) C-terminal proteolytic domain DOM22_RS19605 PF00004 ATPase family associated with various cellular activities (AAA) DOM22_RS19650 PF00361 Proton-conducting membrane transporter DOM22_RS19655 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DOM22_RS19655 PF00361 Proton-conducting membrane transporter DOM22_RS19660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DOM22_RS19660 PF00361 Proton-conducting membrane transporter DOM22_RS19665 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DOM22_RS19670 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DOM22_RS19675 PF00146 NADH dehydrogenase DOM22_RS19680 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DOM22_RS19685 PF17757 UvrB interaction domain DOM22_RS19685 PF03461 TRCF domain DOM22_RS19685 PF00271 Helicase conserved C-terminal domain DOM22_RS19685 PF00270 DEAD/DEAH box helicase DOM22_RS19685 PF02559 CarD-like/TRCF domain DOM22_RS19695 PF00933 Glycosyl hydrolase family 3 N terminal domain DOM22_RS19695 PF01915 Glycosyl hydrolase family 3 C-terminal domain DOM22_RS19700 PF01541 GIY-YIG catalytic domain DOM22_RS19700 PF02151 UvrB/uvrC motif DOM22_RS19700 PF12826 Helix-hairpin-helix motif DOM22_RS19700 PF08459 UvrC Helix-hairpin-helix N-terminal DOM22_RS19705 PF04851 Type III restriction enzyme, res subunit DOM22_RS19705 PF13307 Helicase C-terminal domain DOM22_RS19705 PF00929 Exonuclease DOM22_RS19715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DOM22_RS19720 PF02874 ATP synthase alpha/beta family, beta-barrel domain DOM22_RS19720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOM22_RS19725 PF00231 ATP synthase DOM22_RS19730 PF00306 ATP synthase alpha/beta chain, C terminal domain DOM22_RS19730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DOM22_RS19730 PF02874 ATP synthase alpha/beta family, beta-barrel domain DOM22_RS19735 PF00213 ATP synthase delta (OSCP) subunit DOM22_RS19740 PF00430 ATP synthase B/B' CF(0) DOM22_RS19755 PF17762 HTH domain found in ParB protein DOM22_RS19755 PF02195 ParB-like nuclease domain DOM22_RS19760 PF13614 AAA domain DOM22_RS19770 PF02527 rRNA small subunit methyltransferase G DOM22_RS19775 PF13932 GidA associated domain DOM22_RS19775 PF01134 Glucose inhibited division protein A DOM22_RS19780 PF01926 50S ribosome-binding GTPase DOM22_RS19780 PF12631 MnmE helical domain DOM22_RS19780 PF10396 GTP-binding protein TrmE N-terminus DOM22_RS19790 PF14849 YidC periplasmic domain DOM22_RS19790 PF02096 60Kd inner membrane protein DOM22_RS19795 PF01809 Putative membrane protein insertion efficiency factor DOM22_RS19800 PF00825 Ribonuclease P DOM22_RS19805 PF00468 Ribosomal protein L34