BLE401_RS00025	SM00487	DEAD-like helicases superfamily
BLE401_RS00025	SM00490	helicase superfamily c-terminal domain
BLE401_RS00065	SM00460	Transglutaminase/protease-like homologues
BLE401_RS00070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS00070	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS00075	SM00387	Histidine kinase-like ATPases
BLE401_RS00075	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS00075	SM00448	cheY-homologous receiver domain
BLE401_RS00080	SM00798	AICARFT/IMPCHase bienzyme
BLE401_RS00080	SM00851	MGS-like domain
BLE401_RS00085	SM01209	BLE401_RS00085
BLE401_RS00085	SM01210	BLE401_RS00085
BLE401_RS00155	SM00960	Roadblock/LC7 domain
BLE401_RS00170	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BLE401_RS00170	SM00245	tail specific protease
BLE401_RS00185	SM00116	Domain in cystathionine beta-synthase and other proteins.
BLE401_RS00210	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS00295	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS00295	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS00300	SM00028	Tetratricopeptide repeats
BLE401_RS00330	SM00899	BLE401_RS00330
BLE401_RS00335	SM00899	BLE401_RS00335
BLE401_RS00370	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS00370	SM00091	PAS domain
BLE401_RS00370	SM00387	Histidine kinase-like ATPases
BLE401_RS00370	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS00370	SM00448	cheY-homologous receiver domain
BLE401_RS00390	SM00487	DEAD-like helicases superfamily
BLE401_RS00390	SM00490	helicase superfamily c-terminal domain
BLE401_RS00390	SM00847	Helicase associated domain (HA2)  Add an annotation
BLE401_RS00425	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS00445	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS00445	SM00479	BLE401_RS00445
BLE401_RS00450	SM00671	Sel1-like repeats.
BLE401_RS00505	SM00387	Histidine kinase-like ATPases
BLE401_RS00505	SM00433	TopoisomeraseII
BLE401_RS00525	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS00555	SM00363	S4 RNA-binding domain
BLE401_RS00560	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS00570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS00570	SM00073	Histidine Phosphotransfer domain
BLE401_RS00570	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS00570	SM00091	PAS domain
BLE401_RS00570	SM00387	Histidine kinase-like ATPases
BLE401_RS00570	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS00570	SM00448	cheY-homologous receiver domain
BLE401_RS00580	SM00220	Serine/Threonine protein kinases, catalytic domain
BLE401_RS00580	SM00487	DEAD-like helicases superfamily
BLE401_RS00630	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS00635	SM00387	Histidine kinase-like ATPases
BLE401_RS00635	SM00448	cheY-homologous receiver domain
BLE401_RS00640	SM00387	Histidine kinase-like ATPases
BLE401_RS00640	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS00640	SM00448	cheY-homologous receiver domain
BLE401_RS00650	SM00912	haemagglutination activity domain
BLE401_RS00725	SM00460	Transglutaminase/protease-like homologues
BLE401_RS00735	SM00028	Tetratricopeptide repeats
BLE401_RS00750	SM00028	Tetratricopeptide repeats
BLE401_RS00785	SM00267	diguanylate cyclase
BLE401_RS00790	SM00091	PAS domain
BLE401_RS00790	SM00387	Histidine kinase-like ATPases
BLE401_RS00790	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS00790	SM00448	cheY-homologous receiver domain
BLE401_RS00805	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS00805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS00805	SM00091	PAS domain
BLE401_RS00805	SM00267	diguanylate cyclase
BLE401_RS00815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BLE401_RS00820	SM00710	Parallel beta-helix repeats
BLE401_RS00835	SM00387	Histidine kinase-like ATPases
BLE401_RS00835	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS00840	SM00448	cheY-homologous receiver domain
BLE401_RS00845	SM00448	cheY-homologous receiver domain
BLE401_RS00875	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS00875	SM00267	diguanylate cyclase
BLE401_RS00880	SM00091	PAS domain
BLE401_RS00955	SM00091	PAS domain
BLE401_RS00955	SM00479	BLE401_RS00955
BLE401_RS00960	SM00448	cheY-homologous receiver domain
BLE401_RS00975	SM00091	PAS domain
BLE401_RS00975	SM00387	Histidine kinase-like ATPases
BLE401_RS00975	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS00975	SM00448	cheY-homologous receiver domain
BLE401_RS00980	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BLE401_RS00980	SM00292	breast cancer carboxy-terminal domain
BLE401_RS00980	SM00532	Ligase N family
BLE401_RS00995	SM01060	BLE401_RS00995
BLE401_RS01055	SM00091	PAS domain
BLE401_RS01055	SM00267	diguanylate cyclase
BLE401_RS01065	SM00671	Sel1-like repeats.
BLE401_RS01070	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS01070	SM00448	cheY-homologous receiver domain
BLE401_RS01075	SM00387	Histidine kinase-like ATPases
BLE401_RS01075	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS01080	SM00260	Two component signalling adaptor domain
BLE401_RS01085	SM00073	Histidine Phosphotransfer domain
BLE401_RS01085	SM00260	Two component signalling adaptor domain
BLE401_RS01085	SM00387	Histidine kinase-like ATPases
BLE401_RS01085	SM01231	BLE401_RS01085
BLE401_RS01090	SM00448	cheY-homologous receiver domain
BLE401_RS01115	SM00060	Fibronectin type 3 domain
BLE401_RS01115	SM00364	Leucine-rich repeats, bacterial type
BLE401_RS01115	SM00365	Leucine-rich repeat, SDS22-like subfamily
BLE401_RS01115	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BLE401_RS01125	SM00116	Domain in cystathionine beta-synthase and other proteins.
BLE401_RS01135	SM00507	HNH nucleases
BLE401_RS01160	SM01192	BLE401_RS01160
BLE401_RS01160	SM01193	BLE401_RS01160
BLE401_RS01170	SM00905	Dihydroneopterin aldolase
BLE401_RS01185	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS01185	SM00091	PAS domain
BLE401_RS01185	SM00267	diguanylate cyclase
BLE401_RS01185	SM00448	cheY-homologous receiver domain
BLE401_RS01190	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BLE401_RS01225	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS01250	SM00487	DEAD-like helicases superfamily
BLE401_RS01250	SM00490	helicase superfamily c-terminal domain
BLE401_RS01310	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS01335	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
BLE401_RS01340	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
BLE401_RS01340	SM00481	DNA polymerase alpha chain like domain
BLE401_RS01365	SM00100	Cyclic nucleotide-monophosphate binding domain
BLE401_RS01380	SM00387	Histidine kinase-like ATPases
BLE401_RS01380	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS01380	SM00448	cheY-homologous receiver domain
BLE401_RS01390	SM00458	Ricin-type beta-trefoil
BLE401_RS01465	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS01465	SM00091	PAS domain
BLE401_RS01465	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS01505	SM00387	Histidine kinase-like ATPases
BLE401_RS01505	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS01545	SM00100	Cyclic nucleotide-monophosphate binding domain
BLE401_RS01555	SM00478	endonuclease III
BLE401_RS01555	SM00525	BLE401_RS01555
BLE401_RS01580	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS01625	SM00646	BLE401_RS01625
BLE401_RS01645	SM00855	Phosphoglycerate mutase family
BLE401_RS01660	SM00564	beta-propeller repeat
BLE401_RS01665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS01665	SM00387	Histidine kinase-like ATPases
BLE401_RS01670	SM00421	helix_turn_helix, Lux Regulon
BLE401_RS01670	SM00448	cheY-homologous receiver domain
BLE401_RS01680	SM00387	Histidine kinase-like ATPases
BLE401_RS01680	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS01705	SM00937	BLE401_RS01705
BLE401_RS01715	SM00479	BLE401_RS01715
BLE401_RS01730	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS01745	SM00880	BLE401_RS01745
BLE401_RS01745	SM01118	BLE401_RS01745
BLE401_RS01850	SM00387	Histidine kinase-like ATPases
BLE401_RS01850	SM00448	cheY-homologous receiver domain
BLE401_RS01855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS01855	SM00091	PAS domain
BLE401_RS01855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS01855	SM00387	Histidine kinase-like ATPases
BLE401_RS01855	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS01855	SM00448	cheY-homologous receiver domain
BLE401_RS01880	SM00840	BLE401_RS01880
BLE401_RS01885	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS01885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS01900	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS01900	SM00091	PAS domain
BLE401_RS01900	SM00387	Histidine kinase-like ATPases
BLE401_RS01900	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS01900	SM00448	cheY-homologous receiver domain
BLE401_RS01910	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS01915	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS01935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS01935	SM00387	Histidine kinase-like ATPases
BLE401_RS01935	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS01935	SM00448	cheY-homologous receiver domain
BLE401_RS01960	SM00062	Bacterial periplasmic substrate-binding proteins
BLE401_RS01960	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BLE401_RS01975	SM01230	BLE401_RS01975
BLE401_RS01990	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
BLE401_RS02005	SM00244	prohibitin homologues
BLE401_RS02015	SM00450	Rhodanese Homology Domain
BLE401_RS02020	SM01004	Delta-aminolevulinic acid dehydratase
BLE401_RS02025	SM00100	Cyclic nucleotide-monophosphate binding domain
BLE401_RS02025	SM00419	helix_turn_helix, cAMP Regulatory protein
BLE401_RS02055	SM00387	Histidine kinase-like ATPases
BLE401_RS02055	SM00448	cheY-homologous receiver domain
BLE401_RS02070	SM00861	Transketolase, pyrimidine binding domain
BLE401_RS02120	SM00387	Histidine kinase-like ATPases
BLE401_RS02120	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS02120	SM00448	cheY-homologous receiver domain
BLE401_RS02125	SM00267	diguanylate cyclase
BLE401_RS02125	SM00448	cheY-homologous receiver domain
BLE401_RS02130	SM00318	Staphylococcal nuclease homologues
BLE401_RS02140	SM00479	BLE401_RS02140
BLE401_RS02150	SM00448	cheY-homologous receiver domain
BLE401_RS02150	SM00850	LytTr DNA-binding domain
BLE401_RS02185	SM01011	Aminopeptidase P, N-terminal domain
BLE401_RS02195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BLE401_RS02195	SM00954	Region found in RelA / SpoT proteins
BLE401_RS02200	SM01409	BLE401_RS02200
BLE401_RS02300	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BLE401_RS02310	SM00327	von Willebrand factor (vWF) type A domain
BLE401_RS02360	SM00900	BLE401_RS02360
BLE401_RS02375	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS02375	SM00091	PAS domain
BLE401_RS02375	SM00387	Histidine kinase-like ATPases
BLE401_RS02380	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS02380	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS02385	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS02440	SM00387	Histidine kinase-like ATPases
BLE401_RS02440	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS02440	SM00448	cheY-homologous receiver domain
BLE401_RS02455	SM00421	helix_turn_helix, Lux Regulon
BLE401_RS02455	SM00448	cheY-homologous receiver domain
BLE401_RS02485	SM00434	DNA Topoisomerase IV
BLE401_RS02490	SM00645	Papain family cysteine protease
BLE401_RS02515	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS02520	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS02540	SM00387	Histidine kinase-like ATPases
BLE401_RS02540	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS02580	SM00341	Helicase and RNase D C-terminal
BLE401_RS02580	SM00487	DEAD-like helicases superfamily
BLE401_RS02580	SM00490	helicase superfamily c-terminal domain
BLE401_RS02580	SM00956	BLE401_RS02580
BLE401_RS02635	SM00634	Bacterial Ig-like domain (group 1)
BLE401_RS02685	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS02690	SM01005	Alanine racemase, C-terminal domain
BLE401_RS02705	SM00861	Transketolase, pyrimidine binding domain
BLE401_RS02725	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BLE401_RS02725	SM00465	GIY-YIG type nucleases (URI domain)
BLE401_RS02755	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS02755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS02755	SM00091	PAS domain
BLE401_RS02755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS02785	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS02785	SM00073	Histidine Phosphotransfer domain
BLE401_RS02785	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS02785	SM00091	PAS domain
BLE401_RS02785	SM00387	Histidine kinase-like ATPases
BLE401_RS02785	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS02785	SM00448	cheY-homologous receiver domain
BLE401_RS02795	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
BLE401_RS02805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS02805	SM00091	PAS domain
BLE401_RS02805	SM00387	Histidine kinase-like ATPases
BLE401_RS02805	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS02805	SM00448	cheY-homologous receiver domain
BLE401_RS02805	SM01079	BLE401_RS02805
BLE401_RS02810	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS02850	SM00062	Bacterial periplasmic substrate-binding proteins
BLE401_RS02885	SM00028	Tetratricopeptide repeats
BLE401_RS02915	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BLE401_RS02940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BLE401_RS02940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS02960	SM00422	helix_turn_helix, mercury resistance
BLE401_RS02970	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS02970	SM00962	SRP54-type protein, GTPase domain
BLE401_RS02970	SM00963	SRP54-type protein, helical bundle domain
BLE401_RS02980	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS02980	SM00091	PAS domain
BLE401_RS02980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS02980	SM00387	Histidine kinase-like ATPases
BLE401_RS02980	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS02980	SM00448	cheY-homologous receiver domain
BLE401_RS02990	SM00028	Tetratricopeptide repeats
BLE401_RS03000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BLE401_RS03000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS03055	SM00852	Probable molybdopterin binding domain
BLE401_RS03075	SM00248	ankyrin repeats
BLE401_RS03085	SM00771	ZipA, C-terminal domain (FtsZ-binding)
BLE401_RS03125	SM00823	Phosphopantetheine attachment site
BLE401_RS03160	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS03175	SM00244	prohibitin homologues
BLE401_RS03200	SM00138	Methyltransferase, chemotaxis proteins 
BLE401_RS03260	SM00028	Tetratricopeptide repeats
BLE401_RS03265	SM00988	UreE urease accessory protein, N-terminal domain
BLE401_RS03270	SM01359	BLE401_RS03270
BLE401_RS03270	SM01360	BLE401_RS03270
BLE401_RS03305	SM00851	MGS-like domain
BLE401_RS03305	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BLE401_RS03310	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BLE401_RS03345	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS03345	SM00091	PAS domain
BLE401_RS03345	SM00387	Histidine kinase-like ATPases
BLE401_RS03345	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS03345	SM00448	cheY-homologous receiver domain
BLE401_RS03365	SM00834	Putative regulatory protein
BLE401_RS03385	SM00271	DnaJ molecular chaperone homology domain
BLE401_RS03405	SM00257	Lysin motif
BLE401_RS03445	SM00271	DnaJ molecular chaperone homology domain
BLE401_RS03470	SM00387	Histidine kinase-like ATPases
BLE401_RS03470	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS03470	SM00448	cheY-homologous receiver domain
BLE401_RS03485	SM00829	Enoylreductase
BLE401_RS03490	SM00387	Histidine kinase-like ATPases
BLE401_RS03490	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS03490	SM00448	cheY-homologous receiver domain
BLE401_RS03535	SM00091	PAS domain
BLE401_RS03660	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS03680	SM00885	D5 N terminal like
BLE401_RS03705	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS03705	SM00448	cheY-homologous receiver domain
BLE401_RS03710	SM00671	Sel1-like repeats.
BLE401_RS03765	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS03790	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS03840	SM00020	Trypsin-like serine protease
BLE401_RS03850	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS03850	SM00091	PAS domain
BLE401_RS03850	SM00387	Histidine kinase-like ATPases
BLE401_RS03850	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS03850	SM00448	cheY-homologous receiver domain
BLE401_RS03860	SM00861	Transketolase, pyrimidine binding domain
BLE401_RS03875	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BLE401_RS03895	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS03895	SM00267	diguanylate cyclase
BLE401_RS03900	SM00320	WD40 repeats
BLE401_RS03930	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS03935	SM00448	cheY-homologous receiver domain
BLE401_RS03935	SM00862	Transcriptional regulatory protein, C terminal
BLE401_RS03940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS03940	SM00387	Histidine kinase-like ATPases
BLE401_RS03940	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS03960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS03960	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS03965	SM00852	Probable molybdopterin binding domain
BLE401_RS03990	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BLE401_RS03995	SM00028	Tetratricopeptide repeats
BLE401_RS04025	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS04040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS04040	SM00387	Histidine kinase-like ATPases
BLE401_RS04040	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04040	SM00448	cheY-homologous receiver domain
BLE401_RS04060	SM00387	Histidine kinase-like ATPases
BLE401_RS04060	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04065	SM00091	PAS domain
BLE401_RS04065	SM00387	Histidine kinase-like ATPases
BLE401_RS04065	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04065	SM00448	cheY-homologous receiver domain
BLE401_RS04070	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS04105	SM00267	diguanylate cyclase
BLE401_RS04125	SM00924	MgtE intracellular N domain
BLE401_RS04140	SM00028	Tetratricopeptide repeats
BLE401_RS04160	SM00853	MutL C terminal dimerisation domain
BLE401_RS04160	SM01340	BLE401_RS04160
BLE401_RS04175	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS04245	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BLE401_RS04295	SM00387	Histidine kinase-like ATPases
BLE401_RS04295	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04295	SM00448	cheY-homologous receiver domain
BLE401_RS04310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS04310	SM00091	PAS domain
BLE401_RS04310	SM00387	Histidine kinase-like ATPases
BLE401_RS04310	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04310	SM00448	cheY-homologous receiver domain
BLE401_RS04315	SM00387	Histidine kinase-like ATPases
BLE401_RS04315	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04315	SM00448	cheY-homologous receiver domain
BLE401_RS04325	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS04335	SM00387	Histidine kinase-like ATPases
BLE401_RS04335	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04335	SM00448	cheY-homologous receiver domain
BLE401_RS04355	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS04375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BLE401_RS04375	SM01358	BLE401_RS04375
BLE401_RS04405	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS04405	SM00091	PAS domain
BLE401_RS04405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS04405	SM00387	Histidine kinase-like ATPases
BLE401_RS04405	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04405	SM00448	cheY-homologous receiver domain
BLE401_RS04440	SM00364	Leucine-rich repeats, bacterial type
BLE401_RS04440	SM00365	Leucine-rich repeat, SDS22-like subfamily
BLE401_RS04440	SM00367	Leucine-rich repeat - CC (cysteine-containing) subfamily
BLE401_RS04440	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BLE401_RS04455	SM00028	Tetratricopeptide repeats
BLE401_RS04475	SM00825	Beta-ketoacyl synthase
BLE401_RS04480	SM00387	Histidine kinase-like ATPases
BLE401_RS04480	SM00433	TopoisomeraseII
BLE401_RS04540	SM00487	DEAD-like helicases superfamily
BLE401_RS04550	SM00966	SpoVT / AbrB like domain 
BLE401_RS04575	SM01321	BLE401_RS04575
BLE401_RS04595	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS04600	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS04610	SM00062	Bacterial periplasmic substrate-binding proteins
BLE401_RS04615	SM00567	E-Z type HEAT repeats
BLE401_RS04620	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS04620	SM00387	Histidine kinase-like ATPases
BLE401_RS04620	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04620	SM00448	cheY-homologous receiver domain
BLE401_RS04640	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS04640	SM00989	BLE401_RS04640
BLE401_RS04695	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BLE401_RS04755	SM01228	BLE401_RS04755
BLE401_RS04820	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS04885	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS04885	SM00073	Histidine Phosphotransfer domain
BLE401_RS04885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS04885	SM00387	Histidine kinase-like ATPases
BLE401_RS04885	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04885	SM00448	cheY-homologous receiver domain
BLE401_RS04890	SM00387	Histidine kinase-like ATPases
BLE401_RS04890	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS04890	SM00448	cheY-homologous receiver domain
BLE401_RS04940	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS04940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS04960	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS04960	SM00267	diguanylate cyclase
BLE401_RS04960	SM00448	cheY-homologous receiver domain
BLE401_RS04965	SM00448	cheY-homologous receiver domain
BLE401_RS05035	SM00387	Histidine kinase-like ATPases
BLE401_RS05035	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS05035	SM00448	cheY-homologous receiver domain
BLE401_RS05050	SM00852	Probable molybdopterin binding domain
BLE401_RS05065	SM00226	Low molecular weight phosphatase family
BLE401_RS05100	SM01234	BLE401_RS05100
BLE401_RS05115	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS05115	SM00760	Bacterial dnaA protein helix-turn-helix domain
BLE401_RS05120	SM00480	DNA polymerase III beta subunit
BLE401_RS05145	SM00978	BLE401_RS05145
BLE401_RS05160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BLE401_RS05195	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS05200	SM00900	BLE401_RS05200
BLE401_RS05210	SM00028	Tetratricopeptide repeats
BLE401_RS05285	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BLE401_RS05305	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS05305	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS05305	SM00091	PAS domain
BLE401_RS05305	SM00267	diguanylate cyclase
BLE401_RS05355	SM01018	B12 binding domain
BLE401_RS05370	SM01001	AIR carboxylase
BLE401_RS05430	SM00220	Serine/Threonine protein kinases, catalytic domain
BLE401_RS05450	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS05465	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS05485	SM00257	Lysin motif
BLE401_RS05490	SM00961	Ribulose bisphosphate carboxylase, small chain
BLE401_RS05515	SM00487	DEAD-like helicases superfamily
BLE401_RS05515	SM00490	helicase superfamily c-terminal domain
BLE401_RS05545	SM00028	Tetratricopeptide repeats
BLE401_RS05585	SM00957	SecA DEAD-like domain
BLE401_RS05585	SM00958	SecA preprotein cross-linking domain
BLE401_RS05600	SM00864	Tubulin/FtsZ family, GTPase domain
BLE401_RS05600	SM00865	Tubulin/FtsZ family, C-terminal domain
BLE401_RS05640	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS05640	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS05640	SM00091	PAS domain
BLE401_RS05640	SM00267	diguanylate cyclase
BLE401_RS05680	SM00984	UDP binding domain
BLE401_RS05695	SM00267	diguanylate cyclase
BLE401_RS05695	SM00448	cheY-homologous receiver domain
BLE401_RS05730	SM00904	Riboflavin kinase
BLE401_RS05815	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS05870	SM00710	Parallel beta-helix repeats
BLE401_RS05875	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS05880	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS06010	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS06015	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS06070	SM00116	Domain in cystathionine beta-synthase and other proteins.
BLE401_RS06110	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS06115	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS06115	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS06115	SM00091	PAS domain
BLE401_RS06115	SM00267	diguanylate cyclase
BLE401_RS06115	SM00448	cheY-homologous receiver domain
BLE401_RS06120	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS06195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BLE401_RS06195	SM00895	BLE401_RS06195
BLE401_RS06210	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS06225	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS06225	SM01086	C-terminal, D2-small domain, of ClpB protein
BLE401_RS06235	SM00882	Coenzyme A transferase
BLE401_RS06245	SM01230	BLE401_RS06245
BLE401_RS06275	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS06330	SM00028	Tetratricopeptide repeats
BLE401_RS06345	SM00357	Cold shock protein domain
BLE401_RS06400	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS06400	SM01080	BLE401_RS06400
BLE401_RS06415	SM00387	Histidine kinase-like ATPases
BLE401_RS06415	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS06460	SM00028	Tetratricopeptide repeats
BLE401_RS06465	SM00387	Histidine kinase-like ATPases
BLE401_RS06470	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BLE401_RS06520	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS06520	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BLE401_RS06525	SM00220	Serine/Threonine protein kinases, catalytic domain
BLE401_RS06525	SM01080	BLE401_RS06525
BLE401_RS06540	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS06575	SM00028	Tetratricopeptide repeats
BLE401_RS06620	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS06620	SM00091	PAS domain
BLE401_RS06620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS06620	SM00387	Histidine kinase-like ATPases
BLE401_RS06620	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS06620	SM00448	cheY-homologous receiver domain
BLE401_RS06635	SM00054	EF-hand, calcium binding motif
BLE401_RS06690	SM00028	Tetratricopeptide repeats
BLE401_RS06715	SM00434	DNA Topoisomerase IV
BLE401_RS06775	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS06775	SM00387	Histidine kinase-like ATPases
BLE401_RS06775	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS06775	SM00448	cheY-homologous receiver domain
BLE401_RS06780	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BLE401_RS06805	SM00732	Likely ribonuclease with RNase H fold.
BLE401_RS06870	SM00387	Histidine kinase-like ATPases
BLE401_RS06870	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS06870	SM00448	cheY-homologous receiver domain
BLE401_RS06875	SM00173	Ras subfamily of RAS small GTPases
BLE401_RS06875	SM00175	Rab subfamily of small GTPases
BLE401_RS06910	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BLE401_RS06915	SM00316	Ribosomal protein S1-like RNA-binding domain
BLE401_RS06920	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS06920	SM00220	Serine/Threonine protein kinases, catalytic domain
BLE401_RS06920	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS06925	SM00960	Roadblock/LC7 domain
BLE401_RS06950	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS06980	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BLE401_RS06990	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BLE401_RS07075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BLE401_RS07085	SM00116	Domain in cystathionine beta-synthase and other proteins.
BLE401_RS07085	SM01091	Transporter associated domain
BLE401_RS07100	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS07110	SM00028	Tetratricopeptide repeats
BLE401_RS07120	SM00028	Tetratricopeptide repeats
BLE401_RS07125	SM01152	BLE401_RS07125
BLE401_RS07230	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS07285	SM00883	Chaperonin 10 Kd subunit
BLE401_RS07340	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS07400	SM00671	Sel1-like repeats.
BLE401_RS07445	SM00479	BLE401_RS07445
BLE401_RS07485	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS07495	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS07495	SM00091	PAS domain
BLE401_RS07495	SM00267	diguanylate cyclase
BLE401_RS07585	SM00845	GatB domain
BLE401_RS07605	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS07605	SM00091	PAS domain
BLE401_RS07610	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS07615	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BLE401_RS07615	SM00645	Papain family cysteine protease
BLE401_RS07635	SM00091	PAS domain
BLE401_RS07635	SM00387	Histidine kinase-like ATPases
BLE401_RS07635	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS07635	SM00448	cheY-homologous receiver domain
BLE401_RS07645	SM00028	Tetratricopeptide repeats
BLE401_RS07670	SM00316	Ribosomal protein S1-like RNA-binding domain
BLE401_RS07685	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS07710	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS07710	SM01086	C-terminal, D2-small domain, of ClpB protein
BLE401_RS07745	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS07800	SM00321	present in yeast cell wall integrity and stress response component proteins
BLE401_RS07800	SM00564	beta-propeller repeat
BLE401_RS07815	SM00938	Nitrogen regulatory protein P-II
BLE401_RS07820	SM00881	CoA binding domain
BLE401_RS07850	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS07910	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BLE401_RS07910	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BLE401_RS07930	SM00357	Cold shock protein domain
BLE401_RS07935	SM00357	Cold shock protein domain
BLE401_RS07940	SM00357	Cold shock protein domain
BLE401_RS07945	SM00357	Cold shock protein domain
BLE401_RS07950	SM00357	Cold shock protein domain
BLE401_RS07955	SM00357	Cold shock protein domain
BLE401_RS07960	SM00357	Cold shock protein domain
BLE401_RS07965	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS07965	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS07965	SM00091	PAS domain
BLE401_RS07965	SM00387	Histidine kinase-like ATPases
BLE401_RS07980	SM01133	BLE401_RS07980
BLE401_RS08025	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS08030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS08030	SM00091	PAS domain
BLE401_RS08030	SM00267	diguanylate cyclase
BLE401_RS08035	SM00091	PAS domain
BLE401_RS08035	SM00387	Histidine kinase-like ATPases
BLE401_RS08035	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS08035	SM00448	cheY-homologous receiver domain
BLE401_RS08090	SM00248	ankyrin repeats
BLE401_RS08110	SM00028	Tetratricopeptide repeats
BLE401_RS08150	SM00387	Histidine kinase-like ATPases
BLE401_RS08150	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS08155	SM00448	cheY-homologous receiver domain
BLE401_RS08155	SM00862	Transcriptional regulatory protein, C terminal
BLE401_RS08160	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS08210	SM00671	Sel1-like repeats.
BLE401_RS08220	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS08235	SM00072	Guanylate kinase homologues.
BLE401_RS08275	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS08345	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS08345	SM01080	BLE401_RS08345
BLE401_RS08360	SM00460	Transglutaminase/protease-like homologues
BLE401_RS08375	SM00464	Found in ATP-dependent protease La (LON)
BLE401_RS08425	SM00327	von Willebrand factor (vWF) type A domain
BLE401_RS08440	SM00267	diguanylate cyclase
BLE401_RS08445	SM00829	Enoylreductase
BLE401_RS08465	SM00271	DnaJ molecular chaperone homology domain
BLE401_RS08495	SM00829	Enoylreductase
BLE401_RS08505	SM00478	endonuclease III
BLE401_RS08505	SM00525	BLE401_RS08505
BLE401_RS08520	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BLE401_RS08540	SM00671	Sel1-like repeats.
BLE401_RS08625	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS08640	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS08680	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS08680	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS08680	SM00091	PAS domain
BLE401_RS08680	SM00267	diguanylate cyclase
BLE401_RS08680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS08690	SM00028	Tetratricopeptide repeats
BLE401_RS08690	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS08710	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS08740	SM00448	cheY-homologous receiver domain
BLE401_RS08780	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS08845	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS08845	SM00091	PAS domain
BLE401_RS08845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS08845	SM00387	Histidine kinase-like ATPases
BLE401_RS08845	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS08845	SM00448	cheY-homologous receiver domain
BLE401_RS08860	SM00320	WD40 repeats
BLE401_RS08870	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS08900	SM00935	Outer membrane protein (OmpH-like)
BLE401_RS08910	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BLE401_RS08990	SM00905	Dihydroneopterin aldolase
BLE401_RS09110	SM00825	Beta-ketoacyl synthase
BLE401_RS09120	SM00822	BLE401_RS09120
BLE401_RS09125	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BLE401_RS09165	SM00116	Domain in cystathionine beta-synthase and other proteins.
BLE401_RS09200	SM00237	Domains in Na-Ca exchangers and integrin-beta4
BLE401_RS09205	SM00320	WD40 repeats
BLE401_RS09220	SM00387	Histidine kinase-like ATPases
BLE401_RS09220	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS09220	SM00448	cheY-homologous receiver domain
BLE401_RS09225	SM00564	beta-propeller repeat
BLE401_RS09235	SM00062	Bacterial periplasmic substrate-binding proteins
BLE401_RS09290	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS09290	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS09290	SM00091	PAS domain
BLE401_RS09290	SM00267	diguanylate cyclase
BLE401_RS09290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS09320	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS09400	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS09400	SM00091	PAS domain
BLE401_RS09400	SM00387	Histidine kinase-like ATPases
BLE401_RS09400	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS09400	SM00448	cheY-homologous receiver domain
BLE401_RS09405	SM00091	PAS domain
BLE401_RS09415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS09415	SM00091	PAS domain
BLE401_RS09415	SM00387	Histidine kinase-like ATPases
BLE401_RS09415	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS09415	SM00448	cheY-homologous receiver domain
BLE401_RS09430	SM00912	haemagglutination activity domain
BLE401_RS09475	SM00387	Histidine kinase-like ATPases
BLE401_RS09600	SM00028	Tetratricopeptide repeats
BLE401_RS09600	SM00671	Sel1-like repeats.
BLE401_RS09665	SM00924	MgtE intracellular N domain
BLE401_RS09675	SM00155	Phospholipase D. Active site motifs.
BLE401_RS09685	SM01103	BLE401_RS09685
BLE401_RS09690	SM00977	TilS substrate C-terminal domain
BLE401_RS09720	SM00316	Ribosomal protein S1-like RNA-binding domain
BLE401_RS09725	SM00411	bacterial (prokaryotic) histone like domain
BLE401_RS09735	SM00028	Tetratricopeptide repeats
BLE401_RS09740	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BLE401_RS09745	SM00671	Sel1-like repeats.
BLE401_RS09750	SM00873	B3/4 domain
BLE401_RS09750	SM00874	tRNA synthetase B5 domain
BLE401_RS09750	SM00896	Ferredoxin-fold anticodon binding domain
BLE401_RS09755	SM00411	bacterial (prokaryotic) histone like domain
BLE401_RS09760	SM00422	helix_turn_helix, mercury resistance
BLE401_RS09805	SM00878	Biotin carboxylase C-terminal domain
BLE401_RS09805	SM01209	BLE401_RS09805
BLE401_RS09810	SM00387	Histidine kinase-like ATPases
BLE401_RS09810	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS09815	SM00448	cheY-homologous receiver domain
BLE401_RS09840	SM00387	Histidine kinase-like ATPases
BLE401_RS09840	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS09840	SM00448	cheY-homologous receiver domain
BLE401_RS09870	SM01091	Transporter associated domain
BLE401_RS09880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS09880	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS09900	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS09950	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BLE401_RS09965	SM00829	Enoylreductase
BLE401_RS09990	SM00996	S-adenosyl-L-homocysteine hydrolase
BLE401_RS09990	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BLE401_RS10020	SM00981	BLE401_RS10020
BLE401_RS10050	SM00028	Tetratricopeptide repeats
BLE401_RS10060	SM00091	PAS domain
BLE401_RS10060	SM00387	Histidine kinase-like ATPases
BLE401_RS10060	SM00448	cheY-homologous receiver domain
BLE401_RS10155	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS10155	SM00387	Histidine kinase-like ATPases
BLE401_RS10155	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS10155	SM00448	cheY-homologous receiver domain
BLE401_RS10180	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS10180	SM00267	diguanylate cyclase
BLE401_RS10180	SM00448	cheY-homologous receiver domain
BLE401_RS10185	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS10220	SM00838	Elongation factor G C-terminus
BLE401_RS10220	SM00889	Elongation factor G, domain IV
BLE401_RS10230	SM01403	BLE401_RS10230
BLE401_RS10265	SM00322	K homology RNA-binding domain
BLE401_RS10285	SM01374	BLE401_RS10285
BLE401_RS10290	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BLE401_RS10355	SM00363	S4 RNA-binding domain
BLE401_RS10355	SM01390	BLE401_RS10355
BLE401_RS10360	SM00662	RNA polymerases D
BLE401_RS10380	SM00986	Uracil DNA glycosylase superfamily
BLE401_RS10380	SM00987	UreE urease accessory protein, C-terminal domain 
BLE401_RS10395	SM01400	BLE401_RS10395
BLE401_RS10450	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS10470	SM00316	Ribosomal protein S1-like RNA-binding domain
BLE401_RS10470	SM00357	Cold shock protein domain
BLE401_RS10470	SM00955	BLE401_RS10470
BLE401_RS10515	SM00450	Rhodanese Homology Domain
BLE401_RS10530	SM00138	Methyltransferase, chemotaxis proteins 
BLE401_RS10540	SM00448	cheY-homologous receiver domain
BLE401_RS10575	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS10575	SM00994	ClpX C4-type zinc finger
BLE401_RS10575	SM01086	C-terminal, D2-small domain, of ClpB protein
BLE401_RS10580	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS10580	SM00464	Found in ATP-dependent protease La (LON)
BLE401_RS10585	SM00411	bacterial (prokaryotic) histone like domain
BLE401_RS10610	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BLE401_RS10620	SM00028	Tetratricopeptide repeats
BLE401_RS10655	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BLE401_RS10660	SM00387	Histidine kinase-like ATPases
BLE401_RS10695	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS10710	SM00650	Ribosomal RNA adenine dimethylases
BLE401_RS10715	SM00642	Alpha-amylase domain
BLE401_RS10730	SM00028	Tetratricopeptide repeats
BLE401_RS10745	SM00878	Biotin carboxylase C-terminal domain
BLE401_RS10800	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BLE401_RS10800	SM00474	3'-5' exonuclease
BLE401_RS10800	SM00475	5'-3' exonuclease
BLE401_RS10800	SM00482	DNA polymerase A domain
BLE401_RS10855	SM00387	Histidine kinase-like ATPases
BLE401_RS10855	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS10855	SM00448	cheY-homologous receiver domain
BLE401_RS10890	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS10915	SM00917	LeuA allosteric (dimerisation) domain
BLE401_RS10935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS10935	SM00387	Histidine kinase-like ATPases
BLE401_RS10935	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS10940	SM00448	cheY-homologous receiver domain
BLE401_RS10940	SM00862	Transcriptional regulatory protein, C terminal
BLE401_RS10945	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS10965	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BLE401_RS10965	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BLE401_RS10965	SM00493	BLE401_RS10965
BLE401_RS10990	SM01387	BLE401_RS10990
BLE401_RS10995	SM00316	Ribosomal protein S1-like RNA-binding domain
BLE401_RS10995	SM00322	K homology RNA-binding domain
BLE401_RS11000	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS11040	SM00563	Phosphate acyltransferases
BLE401_RS11085	SM00387	Histidine kinase-like ATPases
BLE401_RS11085	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS11100	SM00893	Electron transfer flavoprotein domain
BLE401_RS11105	SM00893	Electron transfer flavoprotein domain
BLE401_RS11115	SM00831	Cation transporter/ATPase, N-terminus
BLE401_RS11205	SM00841	Elongation factor P, C-terminal
BLE401_RS11205	SM01185	BLE401_RS11205
BLE401_RS11230	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS11230	SM01079	BLE401_RS11230
BLE401_RS11245	SM00919	Malic enzyme, NAD binding domain
BLE401_RS11245	SM01274	BLE401_RS11245
BLE401_RS11255	SM00421	helix_turn_helix, Lux Regulon
BLE401_RS11255	SM00448	cheY-homologous receiver domain
BLE401_RS11275	SM00936	Penicillin-binding protein 5, C-terminal domain 
BLE401_RS11280	SM00836	DALR anticodon binding domain
BLE401_RS11280	SM01016	Arginyl tRNA synthetase N terminal dom
BLE401_RS11305	SM00883	Chaperonin 10 Kd subunit
BLE401_RS11405	SM00881	CoA binding domain
BLE401_RS11415	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS11415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS11415	SM00091	PAS domain
BLE401_RS11475	SM00363	S4 RNA-binding domain
BLE401_RS11505	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS11525	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS11535	SM01264	BLE401_RS11535
BLE401_RS11550	SM00387	Histidine kinase-like ATPases
BLE401_RS11550	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS11555	SM00387	Histidine kinase-like ATPases
BLE401_RS11555	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS11555	SM00448	cheY-homologous receiver domain
BLE401_RS11600	SM00364	Leucine-rich repeats, bacterial type
BLE401_RS11615	SM00327	von Willebrand factor (vWF) type A domain
BLE401_RS11640	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS11660	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS11675	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
BLE401_RS11685	SM00320	WD40 repeats
BLE401_RS11685	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS11690	SM00822	BLE401_RS11690
BLE401_RS11695	SM00487	DEAD-like helicases superfamily
BLE401_RS11695	SM00490	helicase superfamily c-terminal domain
BLE401_RS11705	SM00060	Fibronectin type 3 domain
BLE401_RS11705	SM00710	Parallel beta-helix repeats
BLE401_RS11715	SM00267	diguanylate cyclase
BLE401_RS11715	SM00448	cheY-homologous receiver domain
BLE401_RS11720	SM00062	Bacterial periplasmic substrate-binding proteins
BLE401_RS11740	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS11775	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS11775	SM00267	diguanylate cyclase
BLE401_RS11775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS11795	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS11795	SM00994	ClpX C4-type zinc finger
BLE401_RS11795	SM01086	C-terminal, D2-small domain, of ClpB protein
BLE401_RS11850	SM00563	Phosphate acyltransferases
BLE401_RS11885	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS11910	SM00966	SpoVT / AbrB like domain 
BLE401_RS11985	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS12020	SM00318	Staphylococcal nuclease homologues
BLE401_RS12080	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS12085	SM00829	Enoylreductase
BLE401_RS12100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BLE401_RS12125	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS12170	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS12170	SM00267	diguanylate cyclase
BLE401_RS12175	SM00316	Ribosomal protein S1-like RNA-binding domain
BLE401_RS12175	SM00732	Likely ribonuclease with RNase H fold.
BLE401_RS12200	SM00448	cheY-homologous receiver domain
BLE401_RS12205	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS12265	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS12310	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BLE401_RS12365	SM00460	Transglutaminase/protease-like homologues
BLE401_RS12380	SM00912	haemagglutination activity domain
BLE401_RS12385	SM00320	WD40 repeats
BLE401_RS12395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS12395	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS12425	SM01211	BLE401_RS12425
BLE401_RS12445	SM00387	Histidine kinase-like ATPases
BLE401_RS12445	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS12465	SM00448	cheY-homologous receiver domain
BLE401_RS12470	SM00448	cheY-homologous receiver domain
BLE401_RS12475	SM00260	Two component signalling adaptor domain
BLE401_RS12480	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BLE401_RS12490	SM00073	Histidine Phosphotransfer domain
BLE401_RS12490	SM00260	Two component signalling adaptor domain
BLE401_RS12490	SM00387	Histidine kinase-like ATPases
BLE401_RS12490	SM00448	cheY-homologous receiver domain
BLE401_RS12490	SM01231	BLE401_RS12490
BLE401_RS12540	SM00769	Water Stress and Hypersensitive response
BLE401_RS12545	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BLE401_RS12640	SM00830	Chorismate mutase type II
BLE401_RS12695	SM00320	WD40 repeats
BLE401_RS12860	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BLE401_RS12860	SM00954	Region found in RelA / SpoT proteins
BLE401_RS12865	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS12920	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS12950	SM00318	Staphylococcal nuclease homologues
BLE401_RS12960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS12960	SM00387	Histidine kinase-like ATPases
BLE401_RS12960	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS12960	SM00448	cheY-homologous receiver domain
BLE401_RS12965	SM00387	Histidine kinase-like ATPases
BLE401_RS12965	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS12965	SM00448	cheY-homologous receiver domain
BLE401_RS12995	SM00479	BLE401_RS12995
BLE401_RS13050	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13055	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13065	SM00387	Histidine kinase-like ATPases
BLE401_RS13065	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS13065	SM00448	cheY-homologous receiver domain
BLE401_RS13100	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13100	SM00487	DEAD-like helicases superfamily
BLE401_RS13100	SM00490	helicase superfamily c-terminal domain
BLE401_RS13100	SM00847	Helicase associated domain (HA2)  Add an annotation
BLE401_RS13105	SM00387	Histidine kinase-like ATPases
BLE401_RS13105	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS13105	SM00448	cheY-homologous receiver domain
BLE401_RS13130	SM00938	Nitrogen regulatory protein P-II
BLE401_RS13150	SM00671	Sel1-like repeats.
BLE401_RS13195	SM00984	UDP binding domain
BLE401_RS13215	SM00100	Cyclic nucleotide-monophosphate binding domain
BLE401_RS13225	SM00448	cheY-homologous receiver domain
BLE401_RS13250	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BLE401_RS13260	SM00028	Tetratricopeptide repeats
BLE401_RS13295	SM01049	BLE401_RS13295
BLE401_RS13300	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13345	SM01323	BLE401_RS13345
BLE401_RS13365	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13390	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13395	SM01034	Sensors of blue-light using FAD
BLE401_RS13400	SM01034	Sensors of blue-light using FAD
BLE401_RS13410	SM00917	LeuA allosteric (dimerisation) domain
BLE401_RS13420	SM00487	DEAD-like helicases superfamily
BLE401_RS13420	SM00490	helicase superfamily c-terminal domain
BLE401_RS13440	SM00365	Leucine-rich repeat, SDS22-like subfamily
BLE401_RS13440	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BLE401_RS13465	SM00327	von Willebrand factor (vWF) type A domain
BLE401_RS13515	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13525	SM00448	cheY-homologous receiver domain
BLE401_RS13570	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BLE401_RS13575	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BLE401_RS13575	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BLE401_RS13675	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13705	SM00327	von Willebrand factor (vWF) type A domain
BLE401_RS13720	SM00822	BLE401_RS13720
BLE401_RS13740	SM01219	BLE401_RS13740
BLE401_RS13765	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BLE401_RS13815	SM00028	Tetratricopeptide repeats
BLE401_RS13845	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS13855	SM00220	Serine/Threonine protein kinases, catalytic domain
BLE401_RS13855	SM00387	Histidine kinase-like ATPases
BLE401_RS13855	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS13855	SM00448	cheY-homologous receiver domain
BLE401_RS13925	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS13990	SM00450	Rhodanese Homology Domain
BLE401_RS14010	SM00347	helix_turn_helix multiple antibiotic resistance protein
BLE401_RS14015	SM00854	Bacterial capsule synthesis protein PGA_cap
BLE401_RS14070	SM00073	Histidine Phosphotransfer domain
BLE401_RS14070	SM00260	Two component signalling adaptor domain
BLE401_RS14070	SM00387	Histidine kinase-like ATPases
BLE401_RS14070	SM00448	cheY-homologous receiver domain
BLE401_RS14070	SM01231	BLE401_RS14070
BLE401_RS14075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BLE401_RS14075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS14080	SM00260	Two component signalling adaptor domain
BLE401_RS14090	SM00448	cheY-homologous receiver domain
BLE401_RS14095	SM00448	cheY-homologous receiver domain
BLE401_RS14165	SM00822	BLE401_RS14165
BLE401_RS14185	SM00387	Histidine kinase-like ATPases
BLE401_RS14185	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS14200	SM00028	Tetratricopeptide repeats
BLE401_RS14265	SM00450	Rhodanese Homology Domain
BLE401_RS14290	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BLE401_RS14315	SM01207	BLE401_RS14315
BLE401_RS14325	SM00842	Cell division protein FtsA
BLE401_RS14345	SM00965	Secretin and TonB N terminus short domain
BLE401_RS14350	SM00634	Bacterial Ig-like domain (group 1)
BLE401_RS14355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BLE401_RS14380	SM00897	FIST N domain
BLE401_RS14380	SM01204	BLE401_RS14380
BLE401_RS14405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS14425	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS14425	SM00962	SRP54-type protein, GTPase domain
BLE401_RS14425	SM00963	SRP54-type protein, helical bundle domain
BLE401_RS14430	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BLE401_RS14445	SM00644	BLE401_RS14445
BLE401_RS14455	SM00267	diguanylate cyclase
BLE401_RS14455	SM00448	cheY-homologous receiver domain
BLE401_RS14460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS14460	SM00387	Histidine kinase-like ATPases
BLE401_RS14460	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS14460	SM00448	cheY-homologous receiver domain
BLE401_RS14470	SM00220	Serine/Threonine protein kinases, catalytic domain
BLE401_RS14490	SM00986	Uracil DNA glycosylase superfamily
BLE401_RS14490	SM00987	UreE urease accessory protein, C-terminal domain 
BLE401_RS14515	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BLE401_RS14515	SM00534	ATPase domain of DNA mismatch repair MUTS family
BLE401_RS14555	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BLE401_RS14555	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BLE401_RS14560	SM00649	Ribosomal protein L11/L12
BLE401_RS14585	SM00663	RNA polymerase I subunit A N-terminus
BLE401_RS14650	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS14650	SM00091	PAS domain
BLE401_RS14650	SM00387	Histidine kinase-like ATPases
BLE401_RS14650	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS14650	SM00448	cheY-homologous receiver domain
BLE401_RS14655	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BLE401_RS14670	SM00530	Helix-turn-helix XRE-family like proteins 
BLE401_RS14785	SM00974	BLE401_RS14785
BLE401_RS14945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS14945	SM00387	Histidine kinase-like ATPases
BLE401_RS14945	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS14945	SM00448	cheY-homologous receiver domain
BLE401_RS14955	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS14970	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS14970	SM00091	PAS domain
BLE401_RS14975	SM00912	haemagglutination activity domain
BLE401_RS14980	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS14990	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS15105	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BLE401_RS15110	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BLE401_RS15145	SM00052	Putative diguanylate phosphodiesterase
BLE401_RS15145	SM00267	diguanylate cyclase
BLE401_RS15200	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS15200	SM00876	Biotin and Thiamin Synthesis associated domain
BLE401_RS15220	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS15230	SM00028	Tetratricopeptide repeats
BLE401_RS15230	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS15260	SM00463	Small MutS-related domain
BLE401_RS15265	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS15265	SM00091	PAS domain
BLE401_RS15265	SM00267	diguanylate cyclase
BLE401_RS15280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS15280	SM00387	Histidine kinase-like ATPases
BLE401_RS15345	SM00248	ankyrin repeats
BLE401_RS15355	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS15360	SM00881	CoA binding domain
BLE401_RS15370	SM00244	prohibitin homologues
BLE401_RS15390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS15390	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS15455	SM00244	prohibitin homologues
BLE401_RS15480	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BLE401_RS15495	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS15510	SM00448	cheY-homologous receiver domain
BLE401_RS15510	SM01012	BLE401_RS15510
BLE401_RS15545	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS15575	SM00116	Domain in cystathionine beta-synthase and other proteins.
BLE401_RS15575	SM01240	BLE401_RS15575
BLE401_RS15580	SM00829	Enoylreductase
BLE401_RS15745	SM00257	Lysin motif
BLE401_RS15750	SM00257	Lysin motif
BLE401_RS15755	SM00563	Phosphate acyltransferases
BLE401_RS15765	SM00836	DALR anticodon binding domain
BLE401_RS15780	SM00327	von Willebrand factor (vWF) type A domain
BLE401_RS15785	SM01007	Class II Aldolase and Adducin N-terminal domain
BLE401_RS15795	SM00387	Histidine kinase-like ATPases
BLE401_RS15795	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS15795	SM01079	BLE401_RS15795
BLE401_RS15835	SM00028	Tetratricopeptide repeats
BLE401_RS15835	SM00671	Sel1-like repeats.
BLE401_RS15850	SM00271	DnaJ molecular chaperone homology domain
BLE401_RS15870	SM00357	Cold shock protein domain
BLE401_RS15870	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS15870	SM00959	Rho termination factor, N-terminal domain
BLE401_RS15900	SM00955	BLE401_RS15900
BLE401_RS15935	SM00450	Rhodanese Homology Domain
BLE401_RS15940	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BLE401_RS15945	SM00855	Phosphoglycerate mutase family
BLE401_RS15995	SM00244	prohibitin homologues
BLE401_RS16000	SM00244	prohibitin homologues
BLE401_RS16015	SM00788	Adenylosuccinate synthetase
BLE401_RS16065	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS16065	SM00091	PAS domain
BLE401_RS16065	SM00387	Histidine kinase-like ATPases
BLE401_RS16065	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS16065	SM00448	cheY-homologous receiver domain
BLE401_RS16070	SM00564	beta-propeller repeat
BLE401_RS16095	SM00028	Tetratricopeptide repeats
BLE401_RS16100	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS16105	SM00562	BLE401_RS16105
BLE401_RS16145	SM00938	Nitrogen regulatory protein P-II
BLE401_RS16150	SM00479	BLE401_RS16150
BLE401_RS16210	SM00387	Histidine kinase-like ATPases
BLE401_RS16210	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS16215	SM00448	cheY-homologous receiver domain
BLE401_RS16215	SM00862	Transcriptional regulatory protein, C terminal
BLE401_RS16220	SM00028	Tetratricopeptide repeats
BLE401_RS16225	SM00487	DEAD-like helicases superfamily
BLE401_RS16225	SM00490	helicase superfamily c-terminal domain
BLE401_RS16280	SM00867	YceI-like domain 
BLE401_RS16285	SM00867	YceI-like domain 
BLE401_RS16310	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS16310	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS16310	SM00448	cheY-homologous receiver domain
BLE401_RS16315	SM00448	cheY-homologous receiver domain
BLE401_RS16320	SM00387	Histidine kinase-like ATPases
BLE401_RS16320	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS16355	SM00116	Domain in cystathionine beta-synthase and other proteins.
BLE401_RS16380	SM00387	Histidine kinase-like ATPases
BLE401_RS16380	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS16380	SM00448	cheY-homologous receiver domain
BLE401_RS16395	SM00363	S4 RNA-binding domain
BLE401_RS16405	SM00448	cheY-homologous receiver domain
BLE401_RS16410	SM00487	DEAD-like helicases superfamily
BLE401_RS16410	SM00490	helicase superfamily c-terminal domain
BLE401_RS16415	SM00327	von Willebrand factor (vWF) type A domain
BLE401_RS16445	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS16465	SM00400	zinc finger
BLE401_RS16465	SM00493	BLE401_RS16465
BLE401_RS16465	SM00766	DNA primase DnaG DnaB-binding
BLE401_RS16485	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BLE401_RS16485	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BLE401_RS16490	SM00316	Ribosomal protein S1-like RNA-binding domain
BLE401_RS16495	SM00226	Low molecular weight phosphatase family
BLE401_RS16530	SM00387	Histidine kinase-like ATPases
BLE401_RS16530	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS16535	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS16535	SM00448	cheY-homologous receiver domain
BLE401_RS16545	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS16545	SM01086	C-terminal, D2-small domain, of ClpB protein
BLE401_RS16615	SM00034	C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
BLE401_RS16655	SM00487	DEAD-like helicases superfamily
BLE401_RS16690	SM00347	helix_turn_helix multiple antibiotic resistance protein
BLE401_RS16695	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
BLE401_RS16705	SM00387	Histidine kinase-like ATPases
BLE401_RS16705	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS16705	SM00448	cheY-homologous receiver domain
BLE401_RS16790	SM00363	S4 RNA-binding domain
BLE401_RS16795	SM00671	Sel1-like repeats.
BLE401_RS16835	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS16870	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS16875	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS16880	SM00028	Tetratricopeptide repeats
BLE401_RS16905	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS16925	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BLE401_RS16925	SM01232	BLE401_RS16925
BLE401_RS16930	SM00448	cheY-homologous receiver domain
BLE401_RS16930	SM00862	Transcriptional regulatory protein, C terminal
BLE401_RS16960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS16960	SM00331	Sigma factor PP2C-like phosphatases
BLE401_RS16975	SM00387	Histidine kinase-like ATPases
BLE401_RS16975	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17055	SM00387	Histidine kinase-like ATPases
BLE401_RS17055	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17060	SM00448	cheY-homologous receiver domain
BLE401_RS17060	SM00862	Transcriptional regulatory protein, C terminal
BLE401_RS17090	SM00422	helix_turn_helix, mercury resistance
BLE401_RS17110	SM00450	Rhodanese Homology Domain
BLE401_RS17120	SM00028	Tetratricopeptide repeats
BLE401_RS17140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BLE401_RS17140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS17160	SM00448	cheY-homologous receiver domain
BLE401_RS17165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS17165	SM00387	Histidine kinase-like ATPases
BLE401_RS17165	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17220	SM00421	helix_turn_helix, Lux Regulon
BLE401_RS17220	SM00448	cheY-homologous receiver domain
BLE401_RS17225	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS17225	SM00091	PAS domain
BLE401_RS17225	SM00387	Histidine kinase-like ATPases
BLE401_RS17225	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17225	SM00448	cheY-homologous receiver domain
BLE401_RS17235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS17235	SM00387	Histidine kinase-like ATPases
BLE401_RS17235	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17265	SM00062	Bacterial periplasmic substrate-binding proteins
BLE401_RS17275	SM00564	beta-propeller repeat
BLE401_RS17280	SM00487	DEAD-like helicases superfamily
BLE401_RS17315	SM00116	Domain in cystathionine beta-synthase and other proteins.
BLE401_RS17315	SM01329	BLE401_RS17315
BLE401_RS17365	SM00849	Metallo-beta-lactamase superfamily
BLE401_RS17370	SM00947	Carbonic anhydrase
BLE401_RS17395	SM00267	diguanylate cyclase
BLE401_RS17395	SM00448	cheY-homologous receiver domain
BLE401_RS17400	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS17400	SM00448	cheY-homologous receiver domain
BLE401_RS17415	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS17425	SM01130	BLE401_RS17425
BLE401_RS17470	SM00670	Large family of predicted nucleotide-binding domains
BLE401_RS17505	SM00644	BLE401_RS17505
BLE401_RS17520	SM00650	Ribosomal RNA adenine dimethylases
BLE401_RS17535	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS17535	SM00448	cheY-homologous receiver domain
BLE401_RS17575	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS17575	SM00091	PAS domain
BLE401_RS17575	SM00387	Histidine kinase-like ATPases
BLE401_RS17575	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17585	SM00100	Cyclic nucleotide-monophosphate binding domain
BLE401_RS17585	SM00419	helix_turn_helix, cAMP Regulatory protein
BLE401_RS17630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BLE401_RS17630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS17780	SM00028	Tetratricopeptide repeats
BLE401_RS17815	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS17850	SM00387	Histidine kinase-like ATPases
BLE401_RS17850	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17850	SM00448	cheY-homologous receiver domain
BLE401_RS17880	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS17945	SM00387	Histidine kinase-like ATPases
BLE401_RS17945	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17950	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BLE401_RS17950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BLE401_RS17950	SM00387	Histidine kinase-like ATPases
BLE401_RS17950	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17950	SM00448	cheY-homologous receiver domain
BLE401_RS17970	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS17980	SM00387	Histidine kinase-like ATPases
BLE401_RS17980	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17980	SM00448	cheY-homologous receiver domain
BLE401_RS17995	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BLE401_RS17995	SM00091	PAS domain
BLE401_RS17995	SM00387	Histidine kinase-like ATPases
BLE401_RS17995	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS17995	SM00448	cheY-homologous receiver domain
BLE401_RS18035	SM00363	S4 RNA-binding domain
BLE401_RS18045	SM01329	BLE401_RS18045
BLE401_RS18050	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BLE401_RS18075	SM00387	Histidine kinase-like ATPases
BLE401_RS18075	SM00388	His Kinase A (phosphoacceptor) domain
BLE401_RS18075	SM00448	cheY-homologous receiver domain
BLE401_RS18110	SM00357	Cold shock protein domain
BLE401_RS18115	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BLE401_RS18120	SM00382	ATPases associated with a variety of cellular activities
BLE401_RS18140	SM00028	Tetratricopeptide repeats
BLE401_RS18150	SM00855	Phosphoglycerate mutase family
BLE401_RS18155	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BLE401_RS18165	SM00729	Elongator protein 3, MiaB family, Radical SAM
BLE401_RS18210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BLE401_RS18210	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BLE401_RS18225	SM00487	DEAD-like helicases superfamily
BLE401_RS18225	SM00490	helicase superfamily c-terminal domain
BLE401_RS18225	SM00982	BLE401_RS18225
BLE401_RS18225	SM01058	CarD-like/TRCF domain
