AL038_RS00275	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AL038_RS00275	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AL038_RS00305	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AL038_RS00305	PWY-6167	flavin biosynthesis II (archaea)
AL038_RS00305	PWY-6168	flavin biosynthesis III (fungi)
AL038_RS00305	PWY-7863	AL038_RS00305
AL038_RS00345	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS00350	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AL038_RS00350	PWY-7820	AL038_RS00350
AL038_RS00385	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL038_RS00385	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL038_RS00385	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL038_RS00385	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL038_RS00390	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL038_RS00390	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL038_RS00395	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL038_RS00395	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL038_RS00400	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL038_RS00400	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL038_RS00420	PWY-2201	folate transformations I
AL038_RS00420	PWY-5497	purine nucleobases degradation II (anaerobic)
AL038_RS00435	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS00475	PWY-5101	L-isoleucine biosynthesis II
AL038_RS00475	PWY-5103	L-isoleucine biosynthesis III
AL038_RS00475	PWY-5104	L-isoleucine biosynthesis IV
AL038_RS00475	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL038_RS00510	PWY-6123	inosine-5'-phosphate biosynthesis I
AL038_RS00510	PWY-6124	inosine-5'-phosphate biosynthesis II
AL038_RS00510	PWY-7234	inosine-5'-phosphate biosynthesis III
AL038_RS00515	PWY-5532	adenosine nucleotides degradation IV
AL038_RS00515	PWY-5723	Rubisco shunt
AL038_RS00520	PWY-5532	adenosine nucleotides degradation IV
AL038_RS00520	PWY-5723	Rubisco shunt
AL038_RS00530	PWY-5669	phosphatidylethanolamine biosynthesis I
AL038_RS00550	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL038_RS00550	PWY-5723	Rubisco shunt
AL038_RS00565	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL038_RS00595	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL038_RS00640	PWY-6123	inosine-5'-phosphate biosynthesis I
AL038_RS00640	PWY-7234	inosine-5'-phosphate biosynthesis III
AL038_RS00655	PWY-2201	folate transformations I
AL038_RS00655	PWY-3841	folate transformations II
AL038_RS00885	PWY-6891	thiazole biosynthesis II (Bacillus)
AL038_RS00885	PWY-6892	thiazole biosynthesis I (E. coli)
AL038_RS00885	PWY-7560	methylerythritol phosphate pathway II
AL038_RS00985	PWY-6012	acyl carrier protein metabolism I
AL038_RS00985	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL038_RS01000	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
AL038_RS01000	PWY-7784	AL038_RS01000
AL038_RS01065	PWY-5057	L-valine degradation II
AL038_RS01065	PWY-5076	L-leucine degradation III
AL038_RS01065	PWY-5078	L-isoleucine degradation II
AL038_RS01065	PWY-5101	L-isoleucine biosynthesis II
AL038_RS01065	PWY-5103	L-isoleucine biosynthesis III
AL038_RS01065	PWY-5104	L-isoleucine biosynthesis IV
AL038_RS01065	PWY-5108	L-isoleucine biosynthesis V
AL038_RS01065	PWY-7767	AL038_RS01065
AL038_RS01085	PWY-5686	UMP biosynthesis
AL038_RS01085	PWY-7790	AL038_RS01085
AL038_RS01085	PWY-7791	AL038_RS01085
AL038_RS01130	PWY-7731	AL038_RS01130
AL038_RS01285	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
AL038_RS01285	PWY-5644	4-nitrotoluene degradation II
AL038_RS01285	PWY-5645	4-chloronitrobenzene degradation
AL038_RS01285	PWY-5647	2-nitrobenzoate degradation I
AL038_RS01285	PWY-5654	2-amino-3-carboxymuconate semialdehyde degradation to 2-oxopentenoate
AL038_RS01285	PWY-6210	2-aminophenol degradation
AL038_RS01285	PWY-6214	3-chlorocatechol degradation III (<i>meta</i> pathway)
AL038_RS01285	PWY-6336	protocatechuate degradation III (<I>para</I>-cleavage pathway)
AL038_RS01285	PWY-7006	4-amino-3-hydroxybenzoate degradation
AL038_RS01285	PWY-7480	2,3-dihydroxybenzoate degradation
AL038_RS01290	PWY-5162	2-oxopentenoate degradation
AL038_RS01295	PWY-5162	2-oxopentenoate degradation
AL038_RS01295	PWY-5436	L-threonine degradation IV
AL038_RS01295	PWY-5480	pyruvate fermentation to ethanol I
AL038_RS01295	PWY-6587	pyruvate fermentation to ethanol III
AL038_RS01295	PWY-7085	triethylamine degradation
AL038_RS01295	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AL038_RS01315	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
AL038_RS01315	PWY-5641	2-nitrotoluene degradation
AL038_RS01330	PWY-5418	phenol degradation I (aerobic)
AL038_RS01330	PWY-6197	chlorinated phenols degradation
AL038_RS01345	PWY-5418	phenol degradation I (aerobic)
AL038_RS01345	PWY-6197	chlorinated phenols degradation
AL038_RS01410	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL038_RS01410	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL038_RS01410	PWY-7766	AL038_RS01410
AL038_RS01425	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL038_RS01425	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL038_RS01470	PWY-1042	glycolysis IV (plant cytosol)
AL038_RS01470	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL038_RS01470	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS01470	PWY-5723	Rubisco shunt
AL038_RS01470	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL038_RS01470	PWY-6886	1-butanol autotrophic biosynthesis
AL038_RS01470	PWY-6901	superpathway of glucose and xylose degradation
AL038_RS01470	PWY-7003	glycerol degradation to butanol
AL038_RS01470	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL038_RS01470	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL038_RS01475	PWY-1042	glycolysis IV (plant cytosol)
AL038_RS01475	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL038_RS01475	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS01475	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL038_RS01475	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL038_RS01525	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL038_RS01525	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL038_RS01525	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL038_RS01525	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL038_RS01525	PWY-6113	superpathway of mycolate biosynthesis
AL038_RS01525	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL038_RS01525	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL038_RS01525	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL038_RS01525	PWY-7663	gondoate biosynthesis (anaerobic)
AL038_RS01525	PWY-7664	oleate biosynthesis IV (anaerobic)
AL038_RS01525	PWY-7858	AL038_RS01525
AL038_RS01525	PWYG-321	mycolate biosynthesis
AL038_RS01545	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL038_RS01545	PWY-5723	Rubisco shunt
AL038_RS01550	PWY-181	photorespiration
AL038_RS01570	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL038_RS01575	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL038_RS01575	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL038_RS01600	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL038_RS01605	PWY-2201	folate transformations I
AL038_RS01605	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL038_RS01825	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AL038_RS02000	PWY-5340	sulfate activation for sulfonation
AL038_RS02015	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL038_RS02015	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL038_RS02015	PWY-6268	adenosylcobalamin salvage from cobalamin
AL038_RS02015	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL038_RS02035	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL038_RS02035	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL038_RS02035	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL038_RS02050	PWY-6823	molybdenum cofactor biosynthesis
AL038_RS02140	PWY-1042	glycolysis IV (plant cytosol)
AL038_RS02140	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS02140	PWY-6901	superpathway of glucose and xylose degradation
AL038_RS02140	PWY-7003	glycerol degradation to butanol
AL038_RS02155	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL038_RS02155	PWY-5723	Rubisco shunt
AL038_RS02155	PWY-6891	thiazole biosynthesis II (Bacillus)
AL038_RS02155	PWY-6892	thiazole biosynthesis I (E. coli)
AL038_RS02155	PWY-6901	superpathway of glucose and xylose degradation
AL038_RS02155	PWY-7560	methylerythritol phosphate pathway II
AL038_RS02160	PWY-5686	UMP biosynthesis
AL038_RS02160	PWY-7790	AL038_RS02160
AL038_RS02160	PWY-7791	AL038_RS02160
AL038_RS02210	PWY-3041	monoterpene biosynthesis
AL038_RS02210	PWY-5254	methanofuran biosynthesis
AL038_RS02210	PWY-5423	oleoresin monoterpene volatiles biosynthesis
AL038_RS02210	PWY-7410	ipsdienol biosynthesis
AL038_RS02450	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AL038_RS02450	PWY-622	starch biosynthesis
AL038_RS02470	PWY-6167	flavin biosynthesis II (archaea)
AL038_RS02470	PWY-6168	flavin biosynthesis III (fungi)
AL038_RS02475	PWY-6167	flavin biosynthesis II (archaea)
AL038_RS02475	PWY-6168	flavin biosynthesis III (fungi)
AL038_RS02475	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL038_RS02505	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
AL038_RS02600	PWY-5381	pyridine nucleotide cycling (plants)
AL038_RS02600	PWY-7761	AL038_RS02600
AL038_RS02675	PWY-2941	L-lysine biosynthesis II
AL038_RS02675	PWY-2942	L-lysine biosynthesis III
AL038_RS02675	PWY-5097	L-lysine biosynthesis VI
AL038_RS02675	PWY-6559	spermidine biosynthesis II
AL038_RS02675	PWY-6562	norspermidine biosynthesis
AL038_RS02675	PWY-7153	grixazone biosynthesis
AL038_RS02705	PWY-4983	L-citrulline-nitric oxide cycle
AL038_RS02705	PWY-4984	urea cycle
AL038_RS02705	PWY-5	canavanine biosynthesis
AL038_RS02705	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS02705	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL038_RS02715	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS02715	PWY-5686	UMP biosynthesis
AL038_RS02715	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL038_RS02715	PWY-7790	AL038_RS02715
AL038_RS02715	PWY-7791	AL038_RS02715
AL038_RS02720	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS02720	PWY-5686	UMP biosynthesis
AL038_RS02720	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL038_RS02720	PWY-7790	AL038_RS02720
AL038_RS02720	PWY-7791	AL038_RS02720
AL038_RS02745	PWY-6834	spermidine biosynthesis III
AL038_RS02770	PWY-7805	AL038_RS02770
AL038_RS02770	PWY-7807	AL038_RS02770
AL038_RS02820	PWY-1042	glycolysis IV (plant cytosol)
AL038_RS02820	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS02820	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL038_RS02820	PWY-7003	glycerol degradation to butanol
AL038_RS02830	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AL038_RS02830	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AL038_RS02930	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS02930	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL038_RS02935	PWY-6749	CMP-legionaminate biosynthesis I
AL038_RS02980	PWY-6823	molybdenum cofactor biosynthesis
AL038_RS03100	PWY-5723	Rubisco shunt
AL038_RS03115	PWY-3341	L-proline biosynthesis III
AL038_RS03115	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL038_RS03140	PWY-2722	trehalose degradation IV
AL038_RS03140	PWY-2723	trehalose degradation V
AL038_RS03140	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL038_RS03140	PWY-5661	GDP-glucose biosynthesis
AL038_RS03140	PWY-621	sucrose degradation III (sucrose invertase)
AL038_RS03140	PWY-7238	sucrose biosynthesis II
AL038_RS03140	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL038_RS03145	PWY-2722	trehalose degradation IV
AL038_RS03145	PWY-2723	trehalose degradation V
AL038_RS03145	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL038_RS03145	PWY-5661	GDP-glucose biosynthesis
AL038_RS03145	PWY-621	sucrose degradation III (sucrose invertase)
AL038_RS03145	PWY-7238	sucrose biosynthesis II
AL038_RS03145	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL038_RS03170	PWY-2201	folate transformations I
AL038_RS03180	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AL038_RS03195	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AL038_RS03195	PWY-5368	dimorphecolate biosynthesis
AL038_RS03195	PWY-5995	linoleate biosynthesis I (plants)
AL038_RS03195	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AL038_RS03195	PWY-6803	phosphatidylcholine acyl editing
AL038_RS03195	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AL038_RS03195	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AL038_RS03195	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL038_RS03195	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL038_RS03195	PWY-7470	phosphatidylcholine biosynthesis VII
AL038_RS03195	PWY-7618	ricinoleate biosynthesis
AL038_RS03200	PWY-2201	folate transformations I
AL038_RS03280	PWY-40	putrescine biosynthesis I
AL038_RS03280	PWY-43	putrescine biosynthesis II
AL038_RS03280	PWY-6305	putrescine biosynthesis IV
AL038_RS03280	PWY-6834	spermidine biosynthesis III
AL038_RS03300	PWY-5269	cardiolipin biosynthesis II
AL038_RS03300	PWY-5668	cardiolipin biosynthesis I
AL038_RS03300	PWY-7817	AL038_RS03300
AL038_RS03315	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL038_RS03315	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL038_RS03320	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL038_RS03325	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL038_RS03330	PWY-1622	formaldehyde assimilation I (serine pathway)
AL038_RS03330	PWY-5392	reductive TCA cycle II
AL038_RS03330	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL038_RS03330	PWY-5690	TCA cycle II (plants and fungi)
AL038_RS03330	PWY-5913	TCA cycle VI (obligate autotrophs)
AL038_RS03330	PWY-6728	methylaspartate cycle
AL038_RS03330	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS03330	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL038_RS03330	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL038_RS03340	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL038_RS03495	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL038_RS03495	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL038_RS03550	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL038_RS03550	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL038_RS03555	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL038_RS03610	PWY-6840	homoglutathione biosynthesis
AL038_RS03610	PWY-7255	ergothioneine biosynthesis I (bacteria)
AL038_RS03690	PWY-7851	AL038_RS03690
AL038_RS03755	PWY-6148	tetrahydromethanopterin biosynthesis
AL038_RS03800	PWY-5269	cardiolipin biosynthesis II
AL038_RS03800	PWY-5668	cardiolipin biosynthesis I
AL038_RS03800	PWY-7817	AL038_RS03800
AL038_RS03835	PWY-7799	AL038_RS03835
AL038_RS03835	PWY-7800	AL038_RS03835
AL038_RS03850	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL038_RS03855	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AL038_RS03855	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AL038_RS03855	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AL038_RS03855	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AL038_RS03855	PWY-6978	plastoquinol-9 biosynthesis II
AL038_RS03880	PWY-5686	UMP biosynthesis
AL038_RS03880	PWY-7790	AL038_RS03880
AL038_RS03880	PWY-7791	AL038_RS03880
AL038_RS03940	PWY-5663	tetrahydrobiopterin biosynthesis I
AL038_RS03940	PWY-5664	tetrahydrobiopterin biosynthesis II
AL038_RS03940	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL038_RS03940	PWY-6703	preQ<sub>0</sub> biosynthesis
AL038_RS03940	PWY-6983	tetrahydrobiopterin biosynthesis III
AL038_RS03940	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AL038_RS03940	PWY-7852	AL038_RS03940
AL038_RS03995	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL038_RS03995	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL038_RS04030	PWY-7560	methylerythritol phosphate pathway II
AL038_RS04035	PWY-5381	pyridine nucleotide cycling (plants)
AL038_RS04035	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL038_RS04035	PWY-6596	adenosine nucleotides degradation I
AL038_RS04035	PWY-6606	guanosine nucleotides degradation II
AL038_RS04035	PWY-6607	guanosine nucleotides degradation I
AL038_RS04035	PWY-6608	guanosine nucleotides degradation III
AL038_RS04035	PWY-7185	UTP and CTP dephosphorylation I
AL038_RS04035	PWY-7821	AL038_RS04035
AL038_RS04040	PWY-381	nitrate reduction II (assimilatory)
AL038_RS04040	PWY-5675	nitrate reduction V (assimilatory)
AL038_RS04040	PWY-6549	L-glutamine biosynthesis III
AL038_RS04040	PWY-6963	ammonia assimilation cycle I
AL038_RS04040	PWY-6964	ammonia assimilation cycle II
AL038_RS04060	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL038_RS04060	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL038_RS04145	PWY-181	photorespiration
AL038_RS04150	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AL038_RS04150	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AL038_RS04150	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AL038_RS04150	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AL038_RS04150	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AL038_RS04150	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AL038_RS04150	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AL038_RS04150	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AL038_RS04150	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AL038_RS04150	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AL038_RS04190	PWY-43	putrescine biosynthesis II
AL038_RS04225	PWY-2301	<i>myo</i>-inositol biosynthesis
AL038_RS04225	PWY-4702	phytate degradation I
AL038_RS04225	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AL038_RS04240	PWY-5381	pyridine nucleotide cycling (plants)
AL038_RS04240	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL038_RS04240	PWY-7761	AL038_RS04240
AL038_RS04300	PWY-5659	GDP-mannose biosynthesis
AL038_RS04300	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL038_RS04360	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL038_RS04360	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL038_RS04360	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL038_RS04365	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL038_RS04365	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL038_RS04365	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL038_RS04370	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AL038_RS04370	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL038_RS04370	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL038_RS04500	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL038_RS04590	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL038_RS04595	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL038_RS04595	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL038_RS04595	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL038_RS04595	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL038_RS04595	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS04595	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS04595	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL038_RS04595	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL038_RS04795	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL038_RS04795	PWY-6164	3-dehydroquinate biosynthesis I
AL038_RS04795	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL038_RS04835	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL038_RS04835	PWY-6148	tetrahydromethanopterin biosynthesis
AL038_RS04835	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL038_RS04835	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL038_RS04840	PWY-2161	folate polyglutamylation
AL038_RS04845	PWY-1042	glycolysis IV (plant cytosol)
AL038_RS04845	PWY-1622	formaldehyde assimilation I (serine pathway)
AL038_RS04845	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL038_RS04845	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS04845	PWY-5723	Rubisco shunt
AL038_RS04845	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL038_RS04845	PWY-6886	1-butanol autotrophic biosynthesis
AL038_RS04845	PWY-6901	superpathway of glucose and xylose degradation
AL038_RS04845	PWY-7003	glycerol degradation to butanol
AL038_RS04845	PWY-7124	ethylene biosynthesis V (engineered)
AL038_RS04845	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL038_RS04865	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL038_RS04865	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL038_RS04955	PWY-5747	2-methylcitrate cycle II
AL038_RS05075	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL038_RS05075	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL038_RS05075	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL038_RS05075	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL038_RS05075	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS05075	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS05075	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL038_RS05075	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL038_RS05085	PWY-5381	pyridine nucleotide cycling (plants)
AL038_RS05085	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL038_RS05085	PWY-7761	AL038_RS05085
AL038_RS05090	PWY-3341	L-proline biosynthesis III
AL038_RS05090	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL038_RS05190	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS05360	PWY-2201	folate transformations I
AL038_RS05360	PWY-3841	folate transformations II
AL038_RS05500	PWY-3781	aerobic respiration I (cytochrome c)
AL038_RS05500	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL038_RS05500	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL038_RS05500	PWY-5690	TCA cycle II (plants and fungi)
AL038_RS05500	PWY-6728	methylaspartate cycle
AL038_RS05500	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS05500	PWY-7254	TCA cycle VII (acetate-producers)
AL038_RS05500	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL038_RS05505	PWY-3781	aerobic respiration I (cytochrome c)
AL038_RS05505	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL038_RS05505	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL038_RS05505	PWY-5690	TCA cycle II (plants and fungi)
AL038_RS05505	PWY-6728	methylaspartate cycle
AL038_RS05505	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS05505	PWY-7254	TCA cycle VII (acetate-producers)
AL038_RS05505	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL038_RS05545	PWY-6502	oxidized GTP and dGTP detoxification
AL038_RS05545	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL038_RS05545	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL038_RS05545	PWY-6897	thiamin salvage II
AL038_RS05545	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL038_RS05545	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL038_RS05545	PWY-7356	thiamin salvage IV (yeast)
AL038_RS05545	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL038_RS05555	PWY-7851	AL038_RS05555
AL038_RS05685	PWY-6902	chitin degradation II
AL038_RS05685	PWY-7822	AL038_RS05685
AL038_RS05890	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL038_RS05890	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL038_RS05890	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL038_RS05895	PWY-6123	inosine-5'-phosphate biosynthesis I
AL038_RS05895	PWY-6124	inosine-5'-phosphate biosynthesis II
AL038_RS05895	PWY-7234	inosine-5'-phosphate biosynthesis III
AL038_RS06020	PWY-3781	aerobic respiration I (cytochrome c)
AL038_RS06020	PWY-4521	arsenite oxidation I (respiratory)
AL038_RS06020	PWY-6692	Fe(II) oxidation
AL038_RS06020	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL038_RS06145	PWY-2941	L-lysine biosynthesis II
AL038_RS06145	PWY-2942	L-lysine biosynthesis III
AL038_RS06145	PWY-5097	L-lysine biosynthesis VI
AL038_RS06145	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS06145	PWY-6559	spermidine biosynthesis II
AL038_RS06145	PWY-6562	norspermidine biosynthesis
AL038_RS06145	PWY-7153	grixazone biosynthesis
AL038_RS06145	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL038_RS06150	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL038_RS06270	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL038_RS06270	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AL038_RS06270	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AL038_RS06275	PWY-43	putrescine biosynthesis II
AL038_RS06350	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS06420	PWY-6703	preQ<sub>0</sub> biosynthesis
AL038_RS06435	PWY-5316	nicotine biosynthesis
AL038_RS06435	PWY-5381	pyridine nucleotide cycling (plants)
AL038_RS06435	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL038_RS06435	PWY-7342	superpathway of nicotine biosynthesis
AL038_RS06480	PWY-6823	molybdenum cofactor biosynthesis
AL038_RS06480	PWY-6891	thiazole biosynthesis II (Bacillus)
AL038_RS06480	PWY-6892	thiazole biosynthesis I (E. coli)
AL038_RS06480	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL038_RS06695	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL038_RS06695	PWY-6549	L-glutamine biosynthesis III
AL038_RS06695	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL038_RS06695	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL038_RS06735	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL038_RS06770	PWY-2941	L-lysine biosynthesis II
AL038_RS06770	PWY-2942	L-lysine biosynthesis III
AL038_RS06770	PWY-5097	L-lysine biosynthesis VI
AL038_RS06825	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL038_RS06825	PWY-5743	3-hydroxypropanoate cycle
AL038_RS06825	PWY-5744	glyoxylate assimilation
AL038_RS06825	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL038_RS06825	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL038_RS06825	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL038_RS06825	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL038_RS06880	PWY-5913	TCA cycle VI (obligate autotrophs)
AL038_RS06880	PWY-6549	L-glutamine biosynthesis III
AL038_RS06880	PWY-6728	methylaspartate cycle
AL038_RS06880	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS06880	PWY-7124	ethylene biosynthesis V (engineered)
AL038_RS06880	PWY-7254	TCA cycle VII (acetate-producers)
AL038_RS06880	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL038_RS07010	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL038_RS07010	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL038_RS07010	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL038_RS07015	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL038_RS07015	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL038_RS07020	PWY-6825	phosphatidylcholine biosynthesis V
AL038_RS07100	PWY-5941	glycogen degradation II (eukaryotic)
AL038_RS07100	PWY-6724	starch degradation II
AL038_RS07100	PWY-6737	starch degradation V
AL038_RS07100	PWY-7238	sucrose biosynthesis II
AL038_RS07115	PWY-7560	methylerythritol phosphate pathway II
AL038_RS07140	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AL038_RS07145	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL038_RS07145	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL038_RS07145	PWY-6897	thiamin salvage II
AL038_RS07145	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL038_RS07145	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL038_RS07145	PWY-7356	thiamin salvage IV (yeast)
AL038_RS07145	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL038_RS07155	PWY-6891	thiazole biosynthesis II (Bacillus)
AL038_RS07155	PWY-6892	thiazole biosynthesis I (E. coli)
AL038_RS07215	PWY-6655	xanthan biosynthesis
AL038_RS07215	PWY-6658	acetan biosynthesis
AL038_RS07295	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL038_RS07295	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL038_RS07305	PWY-7560	methylerythritol phosphate pathway II
AL038_RS07315	PWY-6936	seleno-amino acid biosynthesis
AL038_RS07320	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AL038_RS07320	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AL038_RS07340	PWY-6420	pyrroloquinoline quinone biosynthesis
AL038_RS07395	PWY-1001	cellulose biosynthesis
AL038_RS07395	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL038_RS07395	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL038_RS07395	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL038_RS07395	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL038_RS07570	PWY-6823	molybdenum cofactor biosynthesis
AL038_RS07570	PWY-6891	thiazole biosynthesis II (Bacillus)
AL038_RS07570	PWY-6892	thiazole biosynthesis I (E. coli)
AL038_RS07570	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL038_RS07575	PWY-6823	molybdenum cofactor biosynthesis
AL038_RS07575	PWY-6891	thiazole biosynthesis II (Bacillus)
AL038_RS07575	PWY-6892	thiazole biosynthesis I (E. coli)
AL038_RS07575	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL038_RS07595	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL038_RS07595	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL038_RS07660	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AL038_RS07675	PWY-5132	humulone biosynthesis
AL038_RS07675	PWY-5133	cohumulone biosynthesis
AL038_RS07675	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL038_RS07675	PWY-7118	chitin degradation to ethanol
AL038_RS07675	PWY-7857	AL038_RS07675
AL038_RS07835	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL038_RS07845	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AL038_RS07845	PWY-6749	CMP-legionaminate biosynthesis I
AL038_RS07845	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AL038_RS07845	PWY-7102	bisabolene biosynthesis
AL038_RS07845	PWY-7131	CMP-legionaminate biosynthesis II
AL038_RS07845	PWY-7721	AL038_RS07845
AL038_RS07845	PWY-7736	AL038_RS07845
AL038_RS07855	PWY-7805	AL038_RS07855
AL038_RS07855	PWY-7807	AL038_RS07855
AL038_RS07860	PWY-4981	L-proline biosynthesis II (from arginine)
AL038_RS07860	PWY-4984	urea cycle
AL038_RS07860	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL038_RS07875	PWY-622	starch biosynthesis
AL038_RS07880	PWY-6700	queuosine biosynthesis
AL038_RS07965	PWY-1042	glycolysis IV (plant cytosol)
AL038_RS07965	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS07965	PWY-6886	1-butanol autotrophic biosynthesis
AL038_RS07965	PWY-6901	superpathway of glucose and xylose degradation
AL038_RS07965	PWY-7003	glycerol degradation to butanol
AL038_RS08025	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL038_RS08085	PWY-2722	trehalose degradation IV
AL038_RS08085	PWY-2723	trehalose degradation V
AL038_RS08085	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL038_RS08085	PWY-5661	GDP-glucose biosynthesis
AL038_RS08085	PWY-621	sucrose degradation III (sucrose invertase)
AL038_RS08085	PWY-7238	sucrose biosynthesis II
AL038_RS08085	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL038_RS08100	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL038_RS08100	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL038_RS08100	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL038_RS08100	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS08100	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL038_RS08100	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL038_RS08100	PWY-7205	CMP phosphorylation
AL038_RS08100	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL038_RS08100	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS08100	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS08100	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS08100	PWY-7224	purine deoxyribonucleosides salvage
AL038_RS08100	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL038_RS08100	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL038_RS08105	PWY-2201	folate transformations I
AL038_RS08145	PWY-5074	mevalonate degradation
AL038_RS08155	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL038_RS08155	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL038_RS08155	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL038_RS08160	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL038_RS08160	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL038_RS08165	PWY-5663	tetrahydrobiopterin biosynthesis I
AL038_RS08165	PWY-5664	tetrahydrobiopterin biosynthesis II
AL038_RS08165	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL038_RS08165	PWY-6703	preQ<sub>0</sub> biosynthesis
AL038_RS08165	PWY-6983	tetrahydrobiopterin biosynthesis III
AL038_RS08165	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AL038_RS08165	PWY-7852	AL038_RS08165
AL038_RS08190	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS08235	PWY-2781	<i>cis</i>-zeatin biosynthesis
AL038_RS08260	PWY-1622	formaldehyde assimilation I (serine pathway)
AL038_RS08260	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS08280	PWY-5667	CDP-diacylglycerol biosynthesis I
AL038_RS08280	PWY-5981	CDP-diacylglycerol biosynthesis III
AL038_RS08290	PWY-6679	jadomycin biosynthesis
AL038_RS08290	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL038_RS08335	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS08380	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL038_RS08380	PWY-7177	UTP and CTP dephosphorylation II
AL038_RS08380	PWY-7185	UTP and CTP dephosphorylation I
AL038_RS08625	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL038_RS08625	PWY-6596	adenosine nucleotides degradation I
AL038_RS08625	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS08640	PWY-5022	4-aminobutanoate degradation V
AL038_RS08640	PWY-6728	methylaspartate cycle
AL038_RS08640	PWY-7126	ethylene biosynthesis IV
AL038_RS08710	PWY-6683	sulfate reduction III (assimilatory)
AL038_RS08760	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
AL038_RS08760	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL038_RS08760	PWY-7796	AL038_RS08760
AL038_RS08765	PWY-5796	malonate decarboxylase activation
AL038_RS08775	PWY-1622	formaldehyde assimilation I (serine pathway)
AL038_RS08775	PWY-181	photorespiration
AL038_RS08775	PWY-2161	folate polyglutamylation
AL038_RS08775	PWY-2201	folate transformations I
AL038_RS08775	PWY-3661	glycine betaine degradation I
AL038_RS08775	PWY-3661-1	glycine betaine degradation II (mammalian)
AL038_RS08775	PWY-3841	folate transformations II
AL038_RS08775	PWY-5497	purine nucleobases degradation II (anaerobic)
AL038_RS08835	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL038_RS08870	PWY-3801	sucrose degradation II (sucrose synthase)
AL038_RS08870	PWY-5054	sorbitol biosynthesis I
AL038_RS08870	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL038_RS08870	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL038_RS08870	PWY-5659	GDP-mannose biosynthesis
AL038_RS08870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL038_RS08870	PWY-621	sucrose degradation III (sucrose invertase)
AL038_RS08870	PWY-622	starch biosynthesis
AL038_RS08870	PWY-6981	chitin biosynthesis
AL038_RS08870	PWY-6992	1,5-anhydrofructose degradation
AL038_RS08870	PWY-7238	sucrose biosynthesis II
AL038_RS08870	PWY-7347	sucrose biosynthesis III
AL038_RS08870	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL038_RS08890	PWY-6123	inosine-5'-phosphate biosynthesis I
AL038_RS08890	PWY-6124	inosine-5'-phosphate biosynthesis II
AL038_RS08890	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS08890	PWY-7234	inosine-5'-phosphate biosynthesis III
AL038_RS09000	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL038_RS09005	PWY-6654	phosphopantothenate biosynthesis III
AL038_RS09010	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL038_RS09010	PWY-6148	tetrahydromethanopterin biosynthesis
AL038_RS09010	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL038_RS09010	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL038_RS09010	PWY-7852	AL038_RS09010
AL038_RS09010	PWY-7853	AL038_RS09010
AL038_RS09060	PWY-7294	xylose degradation IV
AL038_RS09060	PWY-7295	L-arabinose degradation IV
AL038_RS09130	PWY-3781	aerobic respiration I (cytochrome c)
AL038_RS09130	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL038_RS09130	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL038_RS09130	PWY-6692	Fe(II) oxidation
AL038_RS09145	PWY-7799	AL038_RS09145
AL038_RS09150	PWY-7801	AL038_RS09150
AL038_RS09170	PWY-6749	CMP-legionaminate biosynthesis I
AL038_RS09200	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS09210	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS09540	PWY-6898	thiamin salvage III
AL038_RS09540	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL038_RS09540	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL038_RS09540	PWY-7356	thiamin salvage IV (yeast)
AL038_RS09550	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL038_RS09550	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL038_RS09550	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL038_RS09550	PWY-6113	superpathway of mycolate biosynthesis
AL038_RS09550	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL038_RS09550	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL038_RS09550	PWY-7663	gondoate biosynthesis (anaerobic)
AL038_RS09550	PWY-7664	oleate biosynthesis IV (anaerobic)
AL038_RS09550	PWY-7858	AL038_RS09550
AL038_RS09550	PWYG-321	mycolate biosynthesis
AL038_RS09720	PWY-5392	reductive TCA cycle II
AL038_RS09720	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL038_RS09720	PWY-5690	TCA cycle II (plants and fungi)
AL038_RS09720	PWY-5913	TCA cycle VI (obligate autotrophs)
AL038_RS09720	PWY-6728	methylaspartate cycle
AL038_RS09720	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS09720	PWY-7254	TCA cycle VII (acetate-producers)
AL038_RS09720	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL038_RS09820	PWY-2941	L-lysine biosynthesis II
AL038_RS09820	PWY-2942	L-lysine biosynthesis III
AL038_RS09820	PWY-5097	L-lysine biosynthesis VI
AL038_RS09925	PWY-6749	CMP-legionaminate biosynthesis I
AL038_RS09935	PWY-3781	aerobic respiration I (cytochrome c)
AL038_RS09935	PWY-6692	Fe(II) oxidation
AL038_RS09935	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AL038_RS09935	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL038_RS09975	PWY-5839	menaquinol-7 biosynthesis
AL038_RS09975	PWY-5844	menaquinol-9 biosynthesis
AL038_RS09975	PWY-5849	menaquinol-6 biosynthesis
AL038_RS09975	PWY-5890	menaquinol-10 biosynthesis
AL038_RS09975	PWY-5891	menaquinol-11 biosynthesis
AL038_RS09975	PWY-5892	menaquinol-12 biosynthesis
AL038_RS09975	PWY-5895	menaquinol-13 biosynthesis
AL038_RS10015	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AL038_RS10030	PWY-5676	acetyl-CoA fermentation to butanoate II
AL038_RS10030	PWY-5741	ethylmalonyl-CoA pathway
AL038_RS10030	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL038_RS10065	PWY-5958	acridone alkaloid biosynthesis
AL038_RS10065	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL038_RS10065	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL038_RS10070	PWY-5958	acridone alkaloid biosynthesis
AL038_RS10070	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL038_RS10070	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL038_RS10090	PWY-7851	AL038_RS10090
AL038_RS10235	PWY-5344	L-homocysteine biosynthesis
AL038_RS10280	PWY-6703	preQ<sub>0</sub> biosynthesis
AL038_RS10285	PWY-2941	L-lysine biosynthesis II
AL038_RS10285	PWY-2942	L-lysine biosynthesis III
AL038_RS10285	PWY-5097	L-lysine biosynthesis VI
AL038_RS10370	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS10375	PWY-6854	ethylene biosynthesis III (microbes)
AL038_RS10535	PWY-6004	glycine betaine biosynthesis V (from glycine)
AL038_RS10560	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL038_RS10560	PWY-5667	CDP-diacylglycerol biosynthesis I
AL038_RS10560	PWY-6453	stigma estolide biosynthesis
AL038_RS10560	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL038_RS10560	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL038_RS10595	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS10610	PWY-1881	formate oxidation to CO<sub>2</sub>
AL038_RS10610	PWY-5497	purine nucleobases degradation II (anaerobic)
AL038_RS10610	PWY-6696	oxalate degradation III
AL038_RS10655	PWY-6825	phosphatidylcholine biosynthesis V
AL038_RS10665	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AL038_RS10665	PWY-2201	folate transformations I
AL038_RS10665	PWY-3841	folate transformations II
AL038_RS10665	PWY-5030	L-histidine degradation III
AL038_RS10665	PWY-5497	purine nucleobases degradation II (anaerobic)
AL038_RS10665	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL038_RS10710	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
AL038_RS10710	PWY-7784	AL038_RS10710
AL038_RS10770	PWY-6871	3-methylbutanol biosynthesis
AL038_RS11050	PWY-6004	glycine betaine biosynthesis V (from glycine)
AL038_RS11060	PWY-5686	UMP biosynthesis
AL038_RS11110	PWY-6700	queuosine biosynthesis
AL038_RS11205	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL038_RS11205	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL038_RS11205	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL038_RS11205	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL038_RS11290	PWY-2941	L-lysine biosynthesis II
AL038_RS11290	PWY-5097	L-lysine biosynthesis VI
AL038_RS11360	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL038_RS11405	PWY-7805	AL038_RS11405
AL038_RS11405	PWY-7807	AL038_RS11405
AL038_RS11540	PWY-3801	sucrose degradation II (sucrose synthase)
AL038_RS11540	PWY-6527	stachyose degradation
AL038_RS11540	PWY-7238	sucrose biosynthesis II
AL038_RS11540	PWY-7343	UDP-glucose biosynthesis
AL038_RS11540	PWY-7817	AL038_RS11540
AL038_RS11550	PWY-3461	L-tyrosine biosynthesis II
AL038_RS11550	PWY-3462	L-phenylalanine biosynthesis II
AL038_RS11550	PWY-6120	L-tyrosine biosynthesis III
AL038_RS11550	PWY-6627	salinosporamide A biosynthesis
AL038_RS11550	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AL038_RS11550	PWY-7626	bacilysin biosynthesis
AL038_RS11765	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL038_RS11765	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL038_RS11765	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL038_RS11780	PWY-5381	pyridine nucleotide cycling (plants)
AL038_RS11785	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL038_RS11785	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL038_RS11785	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL038_RS11835	PWY-3221	dTDP-L-rhamnose biosynthesis II
AL038_RS11835	PWY-6808	dTDP-D-forosamine biosynthesis
AL038_RS11835	PWY-6942	dTDP-D-desosamine biosynthesis
AL038_RS11835	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL038_RS11835	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AL038_RS11835	PWY-6974	dTDP-L-olivose biosynthesis
AL038_RS11835	PWY-6976	dTDP-L-mycarose biosynthesis
AL038_RS11835	PWY-7104	dTDP-L-megosamine biosynthesis
AL038_RS11835	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AL038_RS11835	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AL038_RS11835	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AL038_RS11835	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AL038_RS11835	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AL038_RS11835	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AL038_RS11835	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AL038_RS11835	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AL038_RS11835	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AL038_RS11835	PWY-7688	AL038_RS11835
AL038_RS11835	PWY-7814	AL038_RS11835
AL038_RS11840	PWY-3221	dTDP-L-rhamnose biosynthesis II
AL038_RS11840	PWY-6808	dTDP-D-forosamine biosynthesis
AL038_RS11840	PWY-6942	dTDP-D-desosamine biosynthesis
AL038_RS11840	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL038_RS11840	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AL038_RS11840	PWY-6974	dTDP-L-olivose biosynthesis
AL038_RS11840	PWY-6976	dTDP-L-mycarose biosynthesis
AL038_RS11840	PWY-7104	dTDP-L-megosamine biosynthesis
AL038_RS11840	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AL038_RS11840	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AL038_RS11840	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AL038_RS11840	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AL038_RS11840	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AL038_RS11840	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AL038_RS11840	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AL038_RS11840	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AL038_RS11840	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AL038_RS11840	PWY-7688	AL038_RS11840
AL038_RS11840	PWY-7814	AL038_RS11840
AL038_RS11995	PWY-3961	phosphopantothenate biosynthesis II
AL038_RS12110	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL038_RS12110	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL038_RS12220	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AL038_RS12225	PWY-3821	galactose degradation III
AL038_RS12225	PWY-6317	galactose degradation I (Leloir pathway)
AL038_RS12225	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AL038_RS12225	PWY-6527	stachyose degradation
AL038_RS12225	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AL038_RS12225	PWY-7344	UDP-D-galactose biosynthesis
AL038_RS12240	PWY-3841	folate transformations II
AL038_RS12240	PWY-6614	tetrahydrofolate biosynthesis
AL038_RS12355	PWY-3081	L-lysine biosynthesis V
AL038_RS12355	PWY-6871	3-methylbutanol biosynthesis
AL038_RS12355	PWY-7710	AL038_RS12355
AL038_RS12360	PWY-6936	seleno-amino acid biosynthesis
AL038_RS12360	PWY-7274	D-cycloserine biosynthesis
AL038_RS12555	PWY-6700	queuosine biosynthesis
AL038_RS12620	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
AL038_RS12620	PWY-7784	AL038_RS12620
AL038_RS12640	PWY-3841	folate transformations II
AL038_RS12640	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL038_RS12640	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS12640	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL038_RS12640	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL038_RS12640	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL038_RS12700	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL038_RS12700	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL038_RS12700	PWY-6897	thiamin salvage II
AL038_RS12700	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL038_RS12700	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL038_RS12700	PWY-7356	thiamin salvage IV (yeast)
AL038_RS12700	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL038_RS12735	PWY-5506	methanol oxidation to formaldehyde IV
AL038_RS12770	PWY-5392	reductive TCA cycle II
AL038_RS12770	PWY-5537	pyruvate fermentation to acetate V
AL038_RS12770	PWY-5538	pyruvate fermentation to acetate VI
AL038_RS12770	PWY-5690	TCA cycle II (plants and fungi)
AL038_RS12770	PWY-5913	TCA cycle VI (obligate autotrophs)
AL038_RS12770	PWY-6728	methylaspartate cycle
AL038_RS12770	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS12770	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL038_RS12905	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL038_RS12905	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL038_RS12935	PWY-1281	sulfoacetaldehyde degradation I
AL038_RS12935	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL038_RS12935	PWY-5482	pyruvate fermentation to acetate II
AL038_RS12935	PWY-5485	pyruvate fermentation to acetate IV
AL038_RS12935	PWY-5497	purine nucleobases degradation II (anaerobic)
AL038_RS12935	PWY-6637	sulfolactate degradation II
AL038_RS12935	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL038_RS12990	PWY-5704	urea degradation II
AL038_RS12995	PWY-5704	urea degradation II
AL038_RS13000	PWY-5525	D-glucuronate degradation I
AL038_RS13015	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL038_RS13015	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL038_RS13015	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL038_RS13015	PWY-6113	superpathway of mycolate biosynthesis
AL038_RS13015	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL038_RS13015	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL038_RS13015	PWY-7663	gondoate biosynthesis (anaerobic)
AL038_RS13015	PWY-7664	oleate biosynthesis IV (anaerobic)
AL038_RS13015	PWY-7858	AL038_RS13015
AL038_RS13015	PWYG-321	mycolate biosynthesis
AL038_RS13020	PWY-1281	sulfoacetaldehyde degradation I
AL038_RS13020	PWY-5482	pyruvate fermentation to acetate II
AL038_RS13020	PWY-5485	pyruvate fermentation to acetate IV
AL038_RS13020	PWY-5497	purine nucleobases degradation II (anaerobic)
AL038_RS13020	PWY-6637	sulfolactate degradation II
AL038_RS13025	PWY-5482	pyruvate fermentation to acetate II
AL038_RS13025	PWY-5485	pyruvate fermentation to acetate IV
AL038_RS13025	PWY-5497	purine nucleobases degradation II (anaerobic)
AL038_RS13250	PWY-6679	jadomycin biosynthesis
AL038_RS13250	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL038_RS13255	PWY-6871	3-methylbutanol biosynthesis
AL038_RS13300	PWY-2201	folate transformations I
AL038_RS13435	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL038_RS13435	PWY-6416	quinate degradation II
AL038_RS13435	PWY-6707	gallate biosynthesis
AL038_RS13455	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AL038_RS13455	PWY-622	starch biosynthesis
AL038_RS13465	PWY-6614	tetrahydrofolate biosynthesis
AL038_RS13650	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
AL038_RS13650	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL038_RS13650	PWY-7796	AL038_RS13650
AL038_RS13680	PWY-6749	CMP-legionaminate biosynthesis I
AL038_RS13695	PWY-6854	ethylene biosynthesis III (microbes)
AL038_RS13750	PWY-1042	glycolysis IV (plant cytosol)
AL038_RS13750	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL038_RS13750	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL038_RS13750	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL038_RS13765	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AL038_RS13785	PWY-7560	methylerythritol phosphate pathway II
AL038_RS14015	PWY-6700	queuosine biosynthesis
AL038_RS14090	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS14145	PWY-6825	phosphatidylcholine biosynthesis V
AL038_RS14150	PWY-5316	nicotine biosynthesis
AL038_RS14150	PWY-7342	superpathway of nicotine biosynthesis
AL038_RS14170	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL038_RS14170	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AL038_RS14175	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL038_RS14230	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL038_RS14230	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL038_RS14430	PWY-5686	UMP biosynthesis
AL038_RS14430	PWY-7790	AL038_RS14430
AL038_RS14430	PWY-7791	AL038_RS14430
AL038_RS14455	PWY-7205	CMP phosphorylation
AL038_RS14460	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL038_RS14465	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AL038_RS14530	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS14565	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AL038_RS14565	PWY-5368	dimorphecolate biosynthesis
AL038_RS14565	PWY-5995	linoleate biosynthesis I (plants)
AL038_RS14565	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AL038_RS14565	PWY-6803	phosphatidylcholine acyl editing
AL038_RS14565	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AL038_RS14565	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AL038_RS14565	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL038_RS14565	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL038_RS14565	PWY-7470	phosphatidylcholine biosynthesis VII
AL038_RS14565	PWY-7618	ricinoleate biosynthesis
AL038_RS14790	PWY-1622	formaldehyde assimilation I (serine pathway)
AL038_RS14790	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL038_RS14790	PWY-5913	TCA cycle VI (obligate autotrophs)
AL038_RS14790	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL038_RS14790	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AL038_RS14790	PWY-6549	L-glutamine biosynthesis III
AL038_RS14790	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL038_RS14790	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL038_RS14790	PWY-7124	ethylene biosynthesis V (engineered)
AL038_RS14865	PWY-5254	methanofuran biosynthesis
AL038_RS14875	PWY-5958	acridone alkaloid biosynthesis
AL038_RS14875	PWY-6543	4-aminobenzoate biosynthesis
AL038_RS14875	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL038_RS14875	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL038_RS14905	PWY-5101	L-isoleucine biosynthesis II
AL038_RS14905	PWY-5103	L-isoleucine biosynthesis III
AL038_RS14905	PWY-5104	L-isoleucine biosynthesis IV
AL038_RS14905	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL038_RS14905	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL038_RS14905	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL038_RS14905	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL038_RS14910	PWY-5101	L-isoleucine biosynthesis II
AL038_RS14910	PWY-5103	L-isoleucine biosynthesis III
AL038_RS14910	PWY-5104	L-isoleucine biosynthesis IV
AL038_RS14910	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL038_RS14910	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL038_RS14910	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL038_RS14910	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL038_RS14915	PWY-5103	L-isoleucine biosynthesis III
AL038_RS14915	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL038_RS14920	PWY-5669	phosphatidylethanolamine biosynthesis I
AL038_RS15015	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL038_RS15040	PWY-4381	fatty acid biosynthesis initiation I
AL038_RS15045	PWY-4381	fatty acid biosynthesis initiation I
AL038_RS15045	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AL038_RS15045	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL038_RS15050	PWY-5367	petroselinate biosynthesis
AL038_RS15050	PWY-5515	L-arabinose degradation II
AL038_RS15050	PWY-5525	D-glucuronate degradation I
AL038_RS15050	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL038_RS15050	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL038_RS15050	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL038_RS15050	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL038_RS15050	PWY-6113	superpathway of mycolate biosynthesis
AL038_RS15050	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL038_RS15050	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL038_RS15050	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL038_RS15050	PWY-7663	gondoate biosynthesis (anaerobic)
AL038_RS15050	PWY-7664	oleate biosynthesis IV (anaerobic)
AL038_RS15050	PWY-7858	AL038_RS15050
AL038_RS15050	PWYG-321	mycolate biosynthesis
AL038_RS15065	PWY-6543	4-aminobenzoate biosynthesis
AL038_RS15180	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL038_RS15180	PWY-6148	tetrahydromethanopterin biosynthesis
AL038_RS15180	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL038_RS15180	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL038_RS15185	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL038_RS15185	PWY-6148	tetrahydromethanopterin biosynthesis
AL038_RS15185	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL038_RS15185	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL038_RS15185	PWY-7852	AL038_RS15185
AL038_RS15185	PWY-7853	AL038_RS15185
AL038_RS15220	PWY-7799	AL038_RS15220
AL038_RS15220	PWY-7800	AL038_RS15220
AL038_RS15250	PWY-5667	CDP-diacylglycerol biosynthesis I
AL038_RS15250	PWY-5981	CDP-diacylglycerol biosynthesis III
AL038_RS15250	PWY-7817	AL038_RS15250
AL038_RS15255	PWY-7294	xylose degradation IV
AL038_RS15255	PWY-7295	L-arabinose degradation IV
AL038_RS15255	PWY-7560	methylerythritol phosphate pathway II
AL038_RS15280	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL038_RS15280	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL038_RS15280	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL038_RS15280	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL038_RS15280	PWY-6113	superpathway of mycolate biosynthesis
AL038_RS15280	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL038_RS15280	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL038_RS15280	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL038_RS15280	PWY-7663	gondoate biosynthesis (anaerobic)
AL038_RS15280	PWY-7664	oleate biosynthesis IV (anaerobic)
AL038_RS15280	PWY-7858	AL038_RS15280
AL038_RS15280	PWYG-321	mycolate biosynthesis
AL038_RS15580	PWY-6897	thiamin salvage II
AL038_RS15580	PWY-7356	thiamin salvage IV (yeast)
AL038_RS15580	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL038_RS15585	PWY-6910	hydroxymethylpyrimidine salvage
AL038_RS15585	PWY-7356	thiamin salvage IV (yeast)
AL038_RS15585	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL038_RS15675	PWY-5381	pyridine nucleotide cycling (plants)
AL038_RS15675	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL038_RS15675	PWY-6596	adenosine nucleotides degradation I
AL038_RS15675	PWY-6606	guanosine nucleotides degradation II
AL038_RS15675	PWY-6607	guanosine nucleotides degradation I
AL038_RS15675	PWY-6608	guanosine nucleotides degradation III
AL038_RS15675	PWY-7185	UTP and CTP dephosphorylation I
AL038_RS15675	PWY-7821	AL038_RS15675
AL038_RS15760	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL038_RS15760	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL038_RS15760	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL038_RS15790	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL038_RS15945	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS15985	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL038_RS15985	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL038_RS16195	PWY-6936	seleno-amino acid biosynthesis
AL038_RS16195	PWY-7274	D-cycloserine biosynthesis
AL038_RS16210	PWY-622	starch biosynthesis
AL038_RS16365	PWY-5392	reductive TCA cycle II
AL038_RS16365	PWY-5537	pyruvate fermentation to acetate V
AL038_RS16365	PWY-5538	pyruvate fermentation to acetate VI
AL038_RS16365	PWY-5690	TCA cycle II (plants and fungi)
AL038_RS16365	PWY-5913	TCA cycle VI (obligate autotrophs)
AL038_RS16365	PWY-6728	methylaspartate cycle
AL038_RS16365	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS16365	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL038_RS16370	PWY-5392	reductive TCA cycle II
AL038_RS16370	PWY-5537	pyruvate fermentation to acetate V
AL038_RS16370	PWY-5538	pyruvate fermentation to acetate VI
AL038_RS16370	PWY-5690	TCA cycle II (plants and fungi)
AL038_RS16370	PWY-5913	TCA cycle VI (obligate autotrophs)
AL038_RS16370	PWY-6728	methylaspartate cycle
AL038_RS16370	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS16370	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL038_RS16550	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL038_RS16550	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL038_RS16595	PWY-6823	molybdenum cofactor biosynthesis
AL038_RS16645	PWY-6829	tRNA methylation (yeast)
AL038_RS16645	PWY-7285	methylwyosine biosynthesis
AL038_RS16645	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AL038_RS16705	PWY-6679	jadomycin biosynthesis
AL038_RS16705	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL038_RS16725	PWY-5278	sulfite oxidation III
AL038_RS16725	PWY-5340	sulfate activation for sulfonation
AL038_RS16725	PWY-6683	sulfate reduction III (assimilatory)
AL038_RS16725	PWY-6932	selenate reduction
AL038_RS16730	PWY-5278	sulfite oxidation III
AL038_RS16730	PWY-5340	sulfate activation for sulfonation
AL038_RS16730	PWY-6683	sulfate reduction III (assimilatory)
AL038_RS16730	PWY-6932	selenate reduction
AL038_RS16735	PWY-6938	NADH repair
AL038_RS16805	PWY-5704	urea degradation II
AL038_RS16885	PWY-181	photorespiration
AL038_RS17010	PWY-5642	2,4-dinitrotoluene degradation
AL038_RS17010	PWY-6373	acrylate degradation
AL038_RS17050	PWY-3341	L-proline biosynthesis III
AL038_RS17050	PWY-4981	L-proline biosynthesis II (from arginine)
AL038_RS17050	PWY-6344	L-ornithine degradation II (Stickland reaction)
AL038_RS17315	PWY-6683	sulfate reduction III (assimilatory)
AL038_RS17375	PWY-5686	UMP biosynthesis
AL038_RS17375	PWY-7790	AL038_RS17375
AL038_RS17375	PWY-7791	AL038_RS17375
AL038_RS17385	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL038_RS17390	PWY-6164	3-dehydroquinate biosynthesis I
AL038_RS17470	PWY-6825	phosphatidylcholine biosynthesis V
AL038_RS17505	PWY-4983	L-citrulline-nitric oxide cycle
AL038_RS17505	PWY-4984	urea cycle
AL038_RS17505	PWY-5	canavanine biosynthesis
AL038_RS17505	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS17505	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL038_RS17510	PWY-40	putrescine biosynthesis I
AL038_RS17510	PWY-43	putrescine biosynthesis II
AL038_RS17510	PWY-6305	putrescine biosynthesis IV
AL038_RS17510	PWY-6834	spermidine biosynthesis III
AL038_RS17565	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AL038_RS17640	PWY-6936	seleno-amino acid biosynthesis
AL038_RS17715	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL038_RS17715	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL038_RS17775	PWY-7158	L-phenylalanine degradation V
AL038_RS17795	PWY-5132	humulone biosynthesis
AL038_RS17795	PWY-5133	cohumulone biosynthesis
AL038_RS17795	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL038_RS17795	PWY-7118	chitin degradation to ethanol
AL038_RS17795	PWY-7857	AL038_RS17795
AL038_RS17830	PWY-6167	flavin biosynthesis II (archaea)
AL038_RS17830	PWY-6168	flavin biosynthesis III (fungi)
AL038_RS17830	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL038_RS17835	PWY-5941	glycogen degradation II (eukaryotic)
AL038_RS17835	PWY-6731	starch degradation III
AL038_RS17835	PWY-6737	starch degradation V
AL038_RS17835	PWY-7238	sucrose biosynthesis II
AL038_RS17855	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS17860	PWY-6728	methylaspartate cycle
AL038_RS17860	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL038_RS17860	PWY-7118	chitin degradation to ethanol
AL038_RS17860	PWY-7294	xylose degradation IV
AL038_RS17860	PWY-7295	L-arabinose degradation IV
AL038_RS17860	PWY-7854	AL038_RS17860
AL038_RS17890	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AL038_RS17890	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AL038_RS17890	PWY-7622	UDP-galactofuranose biosynthesis
AL038_RS17915	PWY-622	starch biosynthesis
AL038_RS17935	PWY-381	nitrate reduction II (assimilatory)
AL038_RS17935	PWY-5675	nitrate reduction V (assimilatory)
AL038_RS17935	PWY-6549	L-glutamine biosynthesis III
AL038_RS17935	PWY-6963	ammonia assimilation cycle I
AL038_RS17935	PWY-6964	ammonia assimilation cycle II
AL038_RS18035	PWY-5747	2-methylcitrate cycle II
AL038_RS18040	PWY-5132	humulone biosynthesis
AL038_RS18040	PWY-5133	cohumulone biosynthesis
AL038_RS18040	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL038_RS18040	PWY-7118	chitin degradation to ethanol
AL038_RS18040	PWY-7857	AL038_RS18040
