locus-tag class description F542_RS00015 PF02590 Predicted SPOUT methyltransferase F542_RS00020 PF03717 Penicillin-binding Protein dimerisation domain F542_RS00020 PF00905 Penicillin binding protein transpeptidase domain F542_RS00025 PF01098 Cell cycle protein F542_RS00030 PF05036 Sporulation related domain F542_RS00030 PF03330 Lytic transglycolase F542_RS00035 PF00768 D-alanyl-D-alanine carboxypeptidase F542_RS00035 PF07943 Penicillin-binding protein 5, C-terminal domain F542_RS00040 PF04359 Protein of unknown function (DUF493) F542_RS00045 PF03099 Biotin/lipoate A/B protein ligase family F542_RS00050 PF04055 Radical SAM superfamily F542_RS00050 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F542_RS00055 PF00448 SRP54-type protein, GTPase domain F542_RS00055 PF02881 SRP54-type protein, helical bundle domain F542_RS00055 PF02978 Signal peptide binding domain F542_RS00060 PF00367 phosphotransferase system, EIIB F542_RS00060 PF02378 Phosphotransferase system, EIIC F542_RS00060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F542_RS00070 PF00294 pfkB family carbohydrate kinase F542_RS00075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F542_RS00075 PF00205 Thiamine pyrophosphate enzyme, central domain F542_RS00075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F542_RS00080 PF01261 Xylose isomerase-like TIM barrel F542_RS00085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F542_RS00085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F542_RS00095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F542_RS00095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F542_RS00100 PF02653 Branched-chain amino acid transport system / permease component F542_RS00105 PF00005 ABC transporter F542_RS00110 PF13407 Periplasmic binding protein domain F542_RS00115 PF00171 Aldehyde dehydrogenase family F542_RS00120 PF04962 KduI/IolB family F542_RS00125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F542_RS00125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F542_RS00130 PF03480 Bacterial extracellular solute-binding protein, family 7 F542_RS00135 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F542_RS00140 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F542_RS00145 PF02615 Malate/L-lactate dehydrogenase F542_RS00150 PF09339 IclR helix-turn-helix domain F542_RS00150 PF01614 Bacterial transcriptional regulator F542_RS00165 PF01464 Transglycosylase SLT domain F542_RS00165 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F542_RS00170 PF04362 Bacterial Fe(2+) trafficking F542_RS00175 PF14815 NUDIX domain F542_RS00175 PF00730 HhH-GPD superfamily base excision DNA repair protein F542_RS00180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F542_RS00185 PF17746 SfsA N-terminal OB domain F542_RS00185 PF03749 Sugar fermentation stimulation protein RE domain F542_RS00190 PF07274 Protein of unknown function (DUF1440) F542_RS00195 PF00227 Proteasome subunit F542_RS00200 PF00004 ATPase family associated with various cellular activities (AAA) F542_RS00200 PF10431 C-terminal, D2-small domain, of ClpB protein F542_RS00200 PF07724 AAA domain (Cdc48 subfamily) F542_RS00210 PF01048 Phosphorylase superfamily F542_RS00215 PF00919 Uncharacterized protein family UPF0004 F542_RS00215 PF18693 TRAM domain F542_RS00215 PF04055 Radical SAM superfamily F542_RS00220 PF18254 HMW1 domain 2 F542_RS00220 PF18071 HMW1C N-terminal F542_RS00230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F542_RS00230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F542_RS00235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F542_RS00240 PF02357 Transcription termination factor nusG F542_RS00240 PF00467 KOW motif F542_RS00245 PF03946 Ribosomal protein L11, N-terminal domain F542_RS00245 PF00298 Ribosomal protein L11, RNA binding domain F542_RS00250 PF00687 Ribosomal protein L1p/L10e family F542_RS00255 PF00466 Ribosomal protein L10 F542_RS00260 PF16320 Ribosomal protein L7/L12 dimerisation domain F542_RS00260 PF00542 Ribosomal protein L7/L12 C-terminal domain F542_RS00265 PF10385 RNA polymerase beta subunit external 1 domain F542_RS00265 PF04560 RNA polymerase Rpb2, domain 7 F542_RS00265 PF04565 RNA polymerase Rpb2, domain 3 F542_RS00265 PF04561 RNA polymerase Rpb2, domain 2 F542_RS00265 PF00562 RNA polymerase Rpb2, domain 6 F542_RS00265 PF04563 RNA polymerase beta subunit F542_RS00270 PF04997 RNA polymerase Rpb1, domain 1 F542_RS00270 PF04998 RNA polymerase Rpb1, domain 5 F542_RS00270 PF05000 RNA polymerase Rpb1, domain 4 F542_RS00270 PF04983 RNA polymerase Rpb1, domain 3 F542_RS00270 PF00623 RNA polymerase Rpb1, domain 2 F542_RS00285 PF07690 Major Facilitator Superfamily F542_RS00290 PF04998 RNA polymerase Rpb1, domain 5 F542_RS00290 PF04983 RNA polymerase Rpb1, domain 3 F542_RS00290 PF05000 RNA polymerase Rpb1, domain 4 F542_RS00290 PF04997 RNA polymerase Rpb1, domain 1 F542_RS00290 PF00623 RNA polymerase Rpb1, domain 2 F542_RS00300 PF02801 Beta-ketoacyl synthase, C-terminal domain F542_RS00300 PF00109 Beta-ketoacyl synthase, N-terminal domain F542_RS00315 PF02801 Beta-ketoacyl synthase, C-terminal domain F542_RS00315 PF00109 Beta-ketoacyl synthase, N-terminal domain F542_RS00335 PF00550 Phosphopantetheine attachment site F542_RS00340 PF00550 Phosphopantetheine attachment site F542_RS00345 PF00501 AMP-binding enzyme F542_RS00345 PF00550 Phosphopantetheine attachment site F542_RS00345 PF00668 Condensation domain F542_RS00345 PF13193 AMP-binding enzyme C-terminal domain F542_RS00390 PF04820 Tryptophan halogenase F542_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F542_RS00410 PF00512 His Kinase A (phospho-acceptor) domain F542_RS00415 PF00145 C-5 cytosine-specific DNA methylase F542_RS00420 PF08521 Two-component sensor kinase N-terminal F542_RS00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F542_RS00420 PF00512 His Kinase A (phospho-acceptor) domain F542_RS00425 PF00486 Transcriptional regulatory protein, C terminal F542_RS00425 PF00072 Response regulator receiver domain F542_RS00440 PF00719 Inorganic pyrophosphatase F542_RS00445 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F542_RS00445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F542_RS00455 PF13417 Glutathione S-transferase, N-terminal domain F542_RS00460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F542_RS00460 PF00356 Bacterial regulatory proteins, lacI family F542_RS00465 PF03841 L-seryl-tRNA selenium transferase F542_RS00465 PF12390 Selenocysteine synthase N terminal F542_RS00470 PF01243 Pyridoxamine 5'-phosphate oxidase F542_RS00470 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F542_RS00475 PF10415 Fumarase C C-terminus F542_RS00475 PF00206 Lyase F542_RS00480 PF17782 DprA winged helix domain F542_RS00480 PF02481 DNA recombination-mediator protein A F542_RS00485 PF01327 Polypeptide deformylase F542_RS00490 PF13545 Crp-like helix-turn-helix domain F542_RS00490 PF00027 Cyclic nucleotide-binding domain F542_RS00495 PF03918 Cytochrome C biogenesis protein F542_RS00500 PF03918 Cytochrome C biogenesis protein F542_RS00505 PF08534 Redoxin F542_RS00510 PF17364 Family of unknown function (DUF5389) F542_RS00515 PF00589 Phage integrase family F542_RS00515 PF02899 Phage integrase, N-terminal SAM-like domain F542_RS00520 PF03358 NADPH-dependent FMN reductase F542_RS00525 PF17954 Quercetinase C-terminal cupin domain F542_RS00525 PF02678 Pirin F542_RS00530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS00530 PF03466 LysR substrate binding domain F542_RS00535 PF01177 Asp/Glu/Hydantoin racemase F542_RS00550 PF01048 Phosphorylase superfamily F542_RS00555 PF07715 TonB-dependent Receptor Plug Domain F542_RS00555 PF00593 TonB dependent receptor F542_RS00560 PF12706 Beta-lactamase superfamily domain F542_RS00580 PF02661 Fic/DOC family F542_RS00580 PF13784 Fic/DOC family N-terminal F542_RS00585 PF02384 N-6 DNA Methylase F542_RS00585 PF12161 HsdM N-terminal domain F542_RS00590 PF01965 DJ-1/PfpI family F542_RS00590 PF12833 Helix-turn-helix domain F542_RS00595 PF00296 Luciferase-like monooxygenase F542_RS00600 PF12697 Alpha/beta hydrolase family F542_RS00605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F542_RS00605 PF16582 Middle domain of thiamine pyrophosphate F542_RS00605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F542_RS00610 PF00202 Aminotransferase class-III F542_RS00615 PF01790 Prolipoprotein diacylglyceryl transferase F542_RS00620 PF01925 Sulfite exporter TauE/SafE F542_RS00625 PF00293 NUDIX domain F542_RS00630 PF08534 Redoxin F542_RS00635 PF01553 Acyltransferase F542_RS00640 PF07732 Multicopper oxidase F542_RS00640 PF07731 Multicopper oxidase F542_RS00645 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F542_RS00650 PF16142 Domain of unknown function (DUF4850) F542_RS00655 PF08543 Phosphomethylpyrimidine kinase F542_RS00660 PF00912 Transglycosylase F542_RS00660 PF14814 Bifunctional transglycosylase second domain F542_RS00660 PF00905 Penicillin binding protein transpeptidase domain F542_RS00665 PF00501 AMP-binding enzyme F542_RS00670 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS00675 PF00005 ABC transporter F542_RS00680 PF17311 Family of unknown function (DUF5358) F542_RS00685 PF01741 Large-conductance mechanosensitive channel, MscL F542_RS00690 PF12724 Flavodoxin domain F542_RS00695 PF01209 ubiE/COQ5 methyltransferase family F542_RS00705 PF03109 ABC1 family F542_RS00720 PF02416 mttA/Hcf106 family F542_RS00730 PF00902 Sec-independent protein translocase protein (TatC) F542_RS00735 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F542_RS00750 PF01192 RNA polymerase Rpb6 F542_RS00755 PF13291 ACT domain F542_RS00755 PF04607 Region found in RelA / SpoT proteins F542_RS00755 PF02824 TGS domain F542_RS00760 PF00174 Oxidoreductase molybdopterin binding domain F542_RS00765 PF01794 Ferric reductase like transmembrane component F542_RS00770 PF17191 RecG wedge domain F542_RS00770 PF00271 Helicase conserved C-terminal domain F542_RS00770 PF00270 DEAD/DEAH box helicase F542_RS00775 PF00338 Ribosomal protein S10p/S20e F542_RS00780 PF00297 Ribosomal protein L3 F542_RS00785 PF00573 Ribosomal protein L4/L1 family F542_RS00790 PF00276 Ribosomal protein L23 F542_RS00795 PF03947 Ribosomal Proteins L2, C-terminal domain F542_RS00795 PF00181 Ribosomal Proteins L2, RNA binding domain F542_RS00800 PF00203 Ribosomal protein S19 F542_RS00805 PF00237 Ribosomal protein L22p/L17e F542_RS00810 PF00189 Ribosomal protein S3, C-terminal domain F542_RS00810 PF07650 KH domain F542_RS00815 PF00252 Ribosomal protein L16p/L10e F542_RS00820 PF00831 Ribosomal L29 protein F542_RS00825 PF00366 Ribosomal protein S17 F542_RS00830 PF11638 DnaA N-terminal domain F542_RS00830 PF08299 Bacterial dnaA protein helix-turn-helix F542_RS00830 PF00308 Bacterial dnaA protein F542_RS00835 PF00712 DNA polymerase III beta subunit, N-terminal domain F542_RS00835 PF02767 DNA polymerase III beta subunit, central domain F542_RS00835 PF02768 DNA polymerase III beta subunit, C-terminal domain F542_RS00840 PF02463 RecF/RecN/SMC N terminal domain F542_RS00845 PF00270 DEAD/DEAH box helicase F542_RS00845 PF02559 CarD-like/TRCF domain F542_RS00845 PF17757 UvrB interaction domain F542_RS00845 PF00271 Helicase conserved C-terminal domain F542_RS00845 PF03461 TRCF domain F542_RS00850 PF13018 Extended Signal Peptide of Type V secretion system F542_RS00850 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin F542_RS00850 PF03895 YadA-like membrane anchor domain F542_RS00850 PF05662 Coiled stalk of trimeric autotransporter adhesin F542_RS00855 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F542_RS00855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F542_RS00860 PF04851 Type III restriction enzyme, res subunit F542_RS00880 PF00378 Enoyl-CoA hydratase/isomerase F542_RS00885 PF00120 Glutamine synthetase, catalytic domain F542_RS00885 PF03951 Glutamine synthetase, beta-Grasp domain F542_RS00890 PF00149 Calcineurin-like phosphoesterase F542_RS00895 PF08676 MutL C terminal dimerisation domain F542_RS00895 PF01119 DNA mismatch repair protein, C-terminal domain F542_RS00905 PF01544 CorA-like Mg2+ transporter protein F542_RS00915 PF00490 Delta-aminolevulinic acid dehydratase F542_RS00920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F542_RS00930 PF08525 Opacity-associated protein A N-terminal motif F542_RS00930 PF04225 Opacity-associated protein A LysM-like domain F542_RS00940 PF02666 Phosphatidylserine decarboxylase F542_RS00945 PF00293 NUDIX domain F542_RS00950 PF06146 Phosphate-starvation-inducible E F542_RS00955 PF01648 4'-phosphopantetheinyl transferase superfamily F542_RS00960 PF03352 Methyladenine glycosylase F542_RS00970 PF01476 LysM domain F542_RS00970 PF01551 Peptidase family M23 F542_RS00980 PF09335 SNARE associated Golgi protein F542_RS00985 PF01975 Survival protein SurE F542_RS00990 PF01142 tRNA pseudouridine synthase D (TruD) F542_RS00995 PF00121 Triosephosphate isomerase F542_RS01020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F542_RS01020 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F542_RS01020 PF02142 MGS-like domain F542_RS01025 PF03960 ArsC family F542_RS01030 PF00809 Pterin binding enzyme F542_RS01045 PF01546 Peptidase family M20/M25/M40 F542_RS01045 PF07687 Peptidase dimerisation domain F542_RS01050 PF13018 Extended Signal Peptide of Type V secretion system F542_RS01050 PF05662 Coiled stalk of trimeric autotransporter adhesin F542_RS01050 PF03895 YadA-like membrane anchor domain F542_RS01050 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin F542_RS01055 PF00037 4Fe-4S binding domain F542_RS01060 PF13521 AAA domain F542_RS01060 PF01467 Cytidylyltransferase-like F542_RS01065 PF00149 Calcineurin-like phosphoesterase F542_RS01075 PF12805 FUSC-like inner membrane protein yccS F542_RS01085 PF05433 Glycine zipper 2TM domain F542_RS01090 PF06185 YecM protein F542_RS01095 PF05746 DALR anticodon binding domain F542_RS01095 PF03485 Arginyl tRNA synthetase N terminal domain F542_RS01095 PF00750 tRNA synthetases class I (R) F542_RS01100 PF00238 Ribosomal protein L14p/L23e F542_RS01105 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F542_RS01105 PF00467 KOW motif F542_RS01110 PF00281 Ribosomal protein L5 F542_RS01110 PF00673 ribosomal L5P family C-terminus F542_RS01115 PF00253 Ribosomal protein S14p/S29e F542_RS01120 PF00410 Ribosomal protein S8 F542_RS01125 PF00347 Ribosomal protein L6 F542_RS01130 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F542_RS01135 PF03719 Ribosomal protein S5, C-terminal domain F542_RS01135 PF00333 Ribosomal protein S5, N-terminal domain F542_RS01140 PF00327 Ribosomal protein L30p/L7e F542_RS01145 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F542_RS01150 PF00344 SecY translocase F542_RS01155 PF00444 Ribosomal protein L36 F542_RS01160 PF00416 Ribosomal protein S13/S18 F542_RS01165 PF00411 Ribosomal protein S11 F542_RS01170 PF01479 S4 domain F542_RS01170 PF00163 Ribosomal protein S4/S9 N-terminal domain F542_RS01175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F542_RS01175 PF01000 RNA polymerase Rpb3/RpoA insert domain F542_RS01175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F542_RS01180 PF01196 Ribosomal protein L17 F542_RS01185 PF00886 Ribosomal protein S16 F542_RS01190 PF01782 RimM N-terminal domain F542_RS01190 PF05239 PRC-barrel domain F542_RS01195 PF01746 tRNA (Guanine-1)-methyltransferase F542_RS01200 PF01245 Ribosomal protein L19 F542_RS01220 PF00710 Asparaginase, N-terminal F542_RS01220 PF17763 Glutaminase/Asparaginase C-terminal domain F542_RS01230 PF06794 Uncharacterised protein family (UPF0270) F542_RS01235 PF00440 Bacterial regulatory proteins, tetR family F542_RS01240 PF00692 dUTPase F542_RS01245 PF02441 Flavoprotein F542_RS01245 PF04127 DNA / pantothenate metabolism flavoprotein F542_RS01250 PF04002 RadC-like JAB domain F542_RS01255 PF00830 Ribosomal L28 family F542_RS01260 PF00471 Ribosomal protein L33 F542_RS01270 PF01156 Inosine-uridine preferring nucleoside hydrolase F542_RS01275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F542_RS01275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F542_RS01275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F542_RS01275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F542_RS01285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F542_RS01285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F542_RS01285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F542_RS01290 PF02350 UDP-N-acetylglucosamine 2-epimerase F542_RS01300 PF00953 Glycosyl transferase family 4 F542_RS01305 PF13419 Haloacid dehalogenase-like hydrolase F542_RS01310 PF01016 Ribosomal L27 protein F542_RS01315 PF00829 Ribosomal prokaryotic L21 protein F542_RS01320 PF01979 Amidohydrolase family F542_RS01325 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F542_RS01335 PF00448 SRP54-type protein, GTPase domain F542_RS01335 PF02881 SRP54-type protein, helical bundle domain F542_RS01340 PF00005 ABC transporter F542_RS01345 PF18075 FtsX extracellular domain F542_RS01350 PF07715 TonB-dependent Receptor Plug Domain F542_RS01350 PF00593 TonB dependent receptor F542_RS01355 PF01032 FecCD transport family F542_RS01365 PF00005 ABC transporter F542_RS01370 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F542_RS01375 PF13416 Bacterial extracellular solute-binding protein F542_RS01380 PF01184 GPR1/FUN34/yaaH family F542_RS01385 PF03610 PTS system fructose IIA component F542_RS01385 PF03830 PTS system sorbose subfamily IIB component F542_RS01390 PF03609 PTS system sorbose-specific iic component F542_RS01395 PF03613 PTS system mannose/fructose/sorbose family IID component F542_RS01400 PF06173 Protein of unknown function (DUF986) F542_RS01405 PF01238 Phosphomannose isomerase type I F542_RS01410 PF08402 TOBE domain F542_RS01410 PF00005 ABC transporter F542_RS01415 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS01425 PF03477 ATP cone domain F542_RS01425 PF02867 Ribonucleotide reductase, barrel domain F542_RS01425 PF00317 Ribonucleotide reductase, all-alpha domain F542_RS01435 PF08220 DeoR-like helix-turn-helix domain F542_RS01435 PF00455 DeoR C terminal sensor domain F542_RS01440 PF01380 SIS domain F542_RS01445 PF00497 Bacterial extracellular solute-binding proteins, family 3 F542_RS01455 PF02810 SEC-C motif F542_RS01460 PF02096 60Kd inner membrane protein F542_RS01460 PF14849 YidC periplasmic domain F542_RS01465 PF02142 MGS-like domain F542_RS01465 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F542_RS01465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F542_RS01470 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F542_RS01470 PF00117 Glutamine amidotransferase class-I F542_RS01475 PF03313 Serine dehydratase alpha chain F542_RS01480 PF01938 TRAM domain F542_RS01480 PF00919 Uncharacterized protein family UPF0004 F542_RS01480 PF04055 Radical SAM superfamily F542_RS01485 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F542_RS01490 PF02896 PEP-utilising enzyme, TIM barrel domain F542_RS01490 PF00391 PEP-utilising enzyme, mobile domain F542_RS01490 PF05524 PEP-utilising enzyme, N-terminal F542_RS01495 PF00381 PTS HPr component phosphorylation site F542_RS01500 PF01118 Semialdehyde dehydrogenase, NAD binding domain F542_RS01500 PF02774 Semialdehyde dehydrogenase, dimerisation domain F542_RS01505 PF11398 Protein of unknown function (DUF2813) F542_RS01510 PF11892 Domain of unknown function (DUF3412) F542_RS01510 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases F542_RS01510 PF03641 Possible lysine decarboxylase F542_RS01515 PF13609 Gram-negative porin F542_RS01520 PF02684 Lipid-A-disaccharide synthetase F542_RS01535 PF00849 RNA pseudouridylate synthase F542_RS01535 PF01479 S4 domain F542_RS01540 PF00294 pfkB family carbohydrate kinase F542_RS01545 PF00251 Glycosyl hydrolases family 32 N-terminal domain F542_RS01545 PF08244 Glycosyl hydrolases family 32 C terminal F542_RS01550 PF13407 Periplasmic binding protein domain F542_RS01550 PF00356 Bacterial regulatory proteins, lacI family F542_RS01555 PF00209 Sodium:neurotransmitter symporter family F542_RS01565 PF01521 Iron-sulphur cluster biosynthesis F542_RS01570 PF16363 GDP-mannose 4,6 dehydratase F542_RS01575 PF00483 Nucleotidyl transferase F542_RS01580 PF04321 RmlD substrate binding domain F542_RS01585 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase F542_RS01590 PF01061 ABC-2 type transporter F542_RS01595 PF00005 ABC transporter F542_RS01605 PF00535 Glycosyl transferase family 2 F542_RS01610 PF02397 Bacterial sugar transferase F542_RS01615 PF00762 Ferrochelatase F542_RS01620 PF05649 Peptidase family M13 F542_RS01620 PF01431 Peptidase family M13 F542_RS01625 PF00109 Beta-ketoacyl synthase, N-terminal domain F542_RS01625 PF02801 Beta-ketoacyl synthase, C-terminal domain F542_RS01635 PF01594 AI-2E family transporter F542_RS01650 PF07715 TonB-dependent Receptor Plug Domain F542_RS01655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F542_RS01655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F542_RS01660 PF02390 Putative methyltransferase F542_RS01665 PF04320 Protein with unknown function (DUF469) F542_RS01670 PF02325 YGGT family F542_RS01675 PF02594 Uncharacterised ACR, YggU family COG1872 F542_RS01680 PF01340 Met Apo-repressor, MetJ F542_RS01690 PF00474 Sodium:solute symporter family F542_RS01695 PF00480 ROK family F542_RS01700 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase F542_RS01705 PF07662 Na+ dependent nucleoside transporter C-terminus F542_RS01705 PF07670 Nucleoside recognition F542_RS01705 PF01773 Na+ dependent nucleoside transporter N-terminus F542_RS01710 PF01791 DeoC/LacD family aldolase F542_RS01715 PF01048 Phosphorylase superfamily F542_RS01720 PF03466 LysR substrate binding domain F542_RS01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS01725 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B F542_RS01730 PF00892 EamA-like transporter family F542_RS01735 PF01926 50S ribosome-binding GTPase F542_RS01735 PF01018 GTP1/OBG F542_RS01740 PF00585 C-terminal regulatory domain of Threonine dehydratase F542_RS01740 PF00291 Pyridoxal-phosphate dependent enzyme F542_RS01745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F542_RS01750 PF00230 Major intrinsic protein F542_RS01760 PF01980 tRNA-methyltransferase O F542_RS01760 PF18389 TrmO C-terminal domain F542_RS01765 PF01040 UbiA prenyltransferase family F542_RS01775 PF00232 Glycosyl hydrolase family 1 F542_RS01780 PF00367 phosphotransferase system, EIIB F542_RS01780 PF02378 Phosphotransferase system, EIIC F542_RS01780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F542_RS01795 PF00849 RNA pseudouridylate synthase F542_RS01800 PF01554 MatE F542_RS01805 PF01464 Transglycosylase SLT domain F542_RS01805 PF00497 Bacterial extracellular solute-binding proteins, family 3 F542_RS01810 PF00664 ABC transporter transmembrane region F542_RS01810 PF00005 ABC transporter F542_RS01815 PF02664 S-Ribosylhomocysteinase (LuxS) F542_RS01820 PF02470 MlaD protein F542_RS01825 PF01475 Ferric uptake regulator family F542_RS01830 PF00258 Flavodoxin F542_RS01835 PF01402 Ribbon-helix-helix protein, copG family F542_RS01840 PF04073 Aminoacyl-tRNA editing domain F542_RS01850 PF00141 Peroxidase F542_RS01855 PF00860 Permease family F542_RS01860 PF04269 Protein of unknown function, DUF440 F542_RS01865 PF01613 Flavin reductase like domain F542_RS01870 PF03848 Tellurite resistance protein TehB F542_RS01870 PF09313 Domain of unknown function (DUF1971) F542_RS01875 PF03737 Aldolase/RraA F542_RS01880 PF04403 Paraquat-inducible protein A F542_RS01885 PF01351 Ribonuclease HII F542_RS01890 PF01571 Aminomethyltransferase folate-binding domain F542_RS01895 PF00291 Pyridoxal-phosphate dependent enzyme F542_RS01895 PF14821 Threonine synthase N terminus F542_RS01900 PF01176 Translation initiation factor 1A / IF-1 F542_RS01905 PF10144 Bacterial virulence factor haemolysin F542_RS01910 PF18429 Domain of unknown function (DUF5609) F542_RS01915 PF04461 Protein of unknown function (DUF520) F542_RS01935 PF01266 FAD dependent oxidoreductase F542_RS01940 PF04055 Radical SAM superfamily F542_RS01940 PF06968 Biotin and Thiamin Synthesis associated domain F542_RS01945 PF00849 RNA pseudouridylate synthase F542_RS01945 PF01479 S4 domain F542_RS01950 PF01300 Telomere recombination F542_RS01965 PF11127 Protein of unknown function (DUF2892) F542_RS01965 PF00581 Rhodanese-like domain F542_RS01970 PF17336 Family of unknown function (DUF5368) F542_RS01975 PF07992 Pyridine nucleotide-disulphide oxidoreductase F542_RS01995 PF00885 6,7-dimethyl-8-ribityllumazine synthase F542_RS02000 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F542_RS02000 PF00925 GTP cyclohydrolase II F542_RS02005 PF00677 Lumazine binding domain F542_RS02010 PF01872 RibD C-terminal domain F542_RS02010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F542_RS02015 PF13145 PPIC-type PPIASE domain F542_RS02020 PF00999 Sodium/hydrogen exchanger family F542_RS02025 PF00312 Ribosomal protein S15 F542_RS02030 PF01228 Glycine radical F542_RS02035 PF03167 Uracil DNA glycosylase superfamily F542_RS02040 PF02646 RmuC family F542_RS02045 PF00117 Glutamine amidotransferase class-I F542_RS02060 PF02657 Fe-S metabolism associated domain F542_RS02065 PF00574 Clp protease F542_RS02070 PF06689 ClpX C4-type zinc finger F542_RS02070 PF10431 C-terminal, D2-small domain, of ClpB protein F542_RS02070 PF07724 AAA domain (Cdc48 subfamily) F542_RS02075 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F542_RS02080 PF03966 Trm112p-like protein F542_RS02085 PF01026 TatD related DNase F542_RS02090 PF00156 Phosphoribosyl transferase domain F542_RS02100 PF04575 Protein of unknown function (DUF560) F542_RS02105 PF02378 Phosphotransferase system, EIIC F542_RS02105 PF00367 phosphotransferase system, EIIB F542_RS02110 PF00128 Alpha amylase, catalytic domain F542_RS02110 PF11941 Domain of unknown function (DUF3459) F542_RS02120 PF00005 ABC transporter F542_RS02125 PF01810 LysE type translocator F542_RS02130 PF04608 Phosphatidylglycerophosphatase A F542_RS02135 PF02769 AIR synthase related protein, C-terminal domain F542_RS02135 PF00586 AIR synthase related protein, N-terminal domain F542_RS02140 PF01029 NusB family F542_RS02145 PF03958 Bacterial type II/III secretion system short domain F542_RS02145 PF00263 Bacterial type II and III secretion system protein F542_RS02170 PF00905 Penicillin binding protein transpeptidase domain F542_RS02170 PF00912 Transglycosylase F542_RS02170 PF17092 Penicillin-binding protein OB-like domain F542_RS02175 PF01202 Shikimate kinase F542_RS02180 PF01761 3-dehydroquinate synthase F542_RS02185 PF02086 D12 class N6 adenine-specific DNA methyltransferase F542_RS02190 PF11799 impB/mucB/samB family C-terminal domain F542_RS02190 PF11798 IMS family HHH motif F542_RS02190 PF00817 impB/mucB/samB family F542_RS02195 PF03956 Lysine exporter LysO F542_RS02250 PF00595 PDZ domain F542_RS02255 PF02554 Carbon starvation protein CstA F542_RS02260 PF00665 Integrase core domain F542_RS02260 PF13333 Integrase core domain F542_RS02265 PF00478 IMP dehydrogenase / GMP reductase domain F542_RS02270 PF00342 Phosphoglucose isomerase F542_RS02275 PF04380 Membrane fusogenic activity F542_RS02300 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F542_RS02300 PF01488 Shikimate / quinate 5-dehydrogenase F542_RS02300 PF08501 Shikimate dehydrogenase substrate binding domain F542_RS02305 PF01300 Telomere recombination F542_RS02310 PF01396 Topoisomerase DNA binding C4 zinc finger F542_RS02315 PF04266 ASCH domain F542_RS02320 PF02631 RecX family F542_RS02325 PF00154 recA bacterial DNA recombination protein F542_RS02330 PF01063 Amino-transferase class IV F542_RS02335 PF00425 chorismate binding enzyme F542_RS02345 PF02562 PhoH-like protein F542_RS02350 PF01272 Transcription elongation factor, GreA/GreB, C-term F542_RS02350 PF03449 Transcription elongation factor, N-terminal F542_RS02355 PF01380 SIS domain F542_RS02355 PF00571 CBS domain F542_RS02365 PF00749 tRNA synthetases class I (E and Q), catalytic domain F542_RS02375 PF00857 Isochorismatase family F542_RS02385 PF00860 Permease family F542_RS02390 PF01180 Dihydroorotate dehydrogenase F542_RS02395 PF03918 Cytochrome C biogenesis protein F542_RS02400 PF03918 Cytochrome C biogenesis protein F542_RS02405 PF08534 Redoxin F542_RS02415 PF01578 Cytochrome C assembly protein F542_RS02415 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F542_RS02420 PF02254 TrkA-N domain F542_RS02420 PF00999 Sodium/hydrogen exchanger family F542_RS02425 PF12633 Adenylate cyclase NT domain F542_RS02425 PF01295 Adenylate cyclase, class-I F542_RS02430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F542_RS02430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F542_RS02435 PF00230 Major intrinsic protein F542_RS02440 PF13183 4Fe-4S dicluster domain F542_RS02440 PF02754 Cysteine-rich domain F542_RS02445 PF00890 FAD binding domain F542_RS02450 PF04324 BFD-like [2Fe-2S] binding domain F542_RS02450 PF01266 FAD dependent oxidoreductase F542_RS02455 PF03009 Glycerophosphoryl diester phosphodiesterase family F542_RS02460 PF07690 Major Facilitator Superfamily F542_RS02465 PF00834 Ribulose-phosphate 3 epimerase family F542_RS02470 PF01197 Ribosomal protein L31 F542_RS02475 PF00444 Ribosomal protein L36 F542_RS02480 PF12800 4Fe-4S binding domain F542_RS02480 PF13187 4Fe-4S dicluster domain F542_RS02480 PF00037 4Fe-4S binding domain F542_RS02490 PF10518 TAT (twin-arginine translocation) pathway signal sequence F542_RS02490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F542_RS02490 PF00384 Molybdopterin oxidoreductase F542_RS02490 PF01568 Molydopterin dinucleotide binding domain F542_RS02495 PF12800 4Fe-4S binding domain F542_RS02495 PF12838 4Fe-4S dicluster domain F542_RS02500 PF12837 4Fe-4S binding domain F542_RS02500 PF12801 4Fe-4S binding domain F542_RS02505 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) F542_RS02510 PF03264 NapC/NirT cytochrome c family, N-terminal region F542_RS02515 PF04393 Protein of unknown function (DUF535) F542_RS02520 PF10396 GTP-binding protein TrmE N-terminus F542_RS02520 PF12631 MnmE helical domain F542_RS02520 PF01926 50S ribosome-binding GTPase F542_RS02525 PF02592 Putative vitamin uptake transporter F542_RS02530 PF00557 Metallopeptidase family M24 F542_RS02535 PF00210 Ferritin-like domain F542_RS02540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F542_RS02545 PF04348 LppC putative lipoprotein F542_RS02550 PF02021 Uncharacterised protein family UPF0102 F542_RS02555 PF13580 SIS domain F542_RS02560 PF04972 BON domain F542_RS02565 PF00005 ABC transporter F542_RS02570 PF02405 Permease MlaE F542_RS02575 PF02470 MlaD protein F542_RS02580 PF05494 MlaC protein F542_RS02590 PF01722 BolA-like protein F542_RS02595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F542_RS02600 PF03100 CcmE F542_RS02605 PF01578 Cytochrome C assembly protein F542_RS02605 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F542_RS02615 PF02446 4-alpha-glucanotransferase F542_RS02625 PF00986 DNA gyrase B subunit, carboxyl terminus F542_RS02625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F542_RS02625 PF00204 DNA gyrase B F542_RS02625 PF01751 Toprim domain F542_RS02655 PF16326 ABC transporter C-terminal domain F542_RS02655 PF00005 ABC transporter F542_RS02655 PF12848 ABC transporter F542_RS02665 PF00899 ThiF family F542_RS02675 PF13533 Biotin-lipoyl like F542_RS02680 PF00005 ABC transporter F542_RS02690 PF02321 Outer membrane efflux protein F542_RS02700 PF01510 N-acetylmuramoyl-L-alanine amidase F542_RS02705 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F542_RS02710 PF00156 Phosphoribosyl transferase domain F542_RS02715 PF01694 Rhomboid family F542_RS02720 PF01323 DSBA-like thioredoxin domain F542_RS02745 PF07804 HipA-like C-terminal domain F542_RS02745 PF13657 HipA N-terminal domain F542_RS02755 PF03741 Integral membrane protein TerC family F542_RS02765 PF02342 TerD domain F542_RS02780 PF02607 B12 binding domain F542_RS02780 PF02965 Vitamin B12 dependent methionine synthase, activation domain F542_RS02780 PF02574 Homocysteine S-methyltransferase F542_RS02780 PF02310 B12 binding domain F542_RS02780 PF00809 Pterin binding enzyme F542_RS02785 PF01263 Aldose 1-epimerase F542_RS02790 PF01208 Uroporphyrinogen decarboxylase (URO-D) F542_RS02795 PF04222 Protein of unknown function (DUF416) F542_RS02800 PF00216 Bacterial DNA-binding protein F542_RS02805 PF03462 PCRF domain F542_RS02805 PF00472 RF-1 domain F542_RS02810 PF17827 PrmC N-terminal domain F542_RS02810 PF13847 Methyltransferase domain F542_RS02815 PF13369 Transglutaminase-like superfamily F542_RS02820 PF00793 DAHP synthetase I family F542_RS02825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F542_RS02825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F542_RS02830 PF02794 RTX toxin acyltransferase family F542_RS02835 PF08339 RTX C-terminal domain F542_RS02835 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) F542_RS02835 PF02382 N-terminal domain in RTX protein F542_RS02840 PF03412 Peptidase C39 family F542_RS02840 PF00005 ABC transporter F542_RS02840 PF00664 ABC transporter transmembrane region F542_RS02845 PF13533 Biotin-lipoyl like F542_RS02855 PF02687 FtsX-like permease family F542_RS02855 PF12704 MacB-like periplasmic core domain F542_RS02860 PF01641 SelR domain F542_RS02860 PF08534 Redoxin F542_RS02860 PF01625 Peptide methionine sulfoxide reductase F542_RS02870 PF01261 Xylose isomerase-like TIM barrel F542_RS02875 PF00877 NlpC/P60 family F542_RS02880 PF00717 Peptidase S24-like F542_RS02885 PF00883 Cytosol aminopeptidase family, catalytic domain F542_RS02885 PF12404 Peptidase F542_RS02890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F542_RS02900 PF00682 HMGL-like F542_RS02900 PF08502 LeuA allosteric (dimerisation) domain F542_RS02905 PF13361 UvrD-like helicase C-terminal domain F542_RS02905 PF00580 UvrD/REP helicase N-terminal domain F542_RS02905 PF12705 PD-(D/E)XK nuclease superfamily F542_RS02915 PF00580 UvrD/REP helicase N-terminal domain F542_RS02915 PF13361 UvrD-like helicase C-terminal domain F542_RS02920 PF00005 ABC transporter F542_RS02920 PF03412 Peptidase C39 family F542_RS02920 PF00664 ABC transporter transmembrane region F542_RS02950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F542_RS02950 PF00529 HlyD membrane-fusion protein of T1SS F542_RS02965 PF01520 N-acetylmuramoyl-L-alanine amidase F542_RS02965 PF01476 LysM domain F542_RS02970 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F542_RS02975 PF00929 Exonuclease F542_RS02980 PF01467 Cytidylyltransferase-like F542_RS02985 PF00534 Glycosyl transferases group 1 F542_RS02985 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F542_RS02995 PF01336 OB-fold nucleic acid binding domain F542_RS02995 PF14579 Helix-hairpin-helix motif F542_RS02995 PF02811 PHP domain F542_RS02995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F542_RS02995 PF07733 Bacterial DNA polymerase III alpha NTPase domain F542_RS03000 PF03739 Lipopolysaccharide export system permease LptF/LptG F542_RS03005 PF03739 Lipopolysaccharide export system permease LptF/LptG F542_RS03010 PF02789 Cytosol aminopeptidase family, N-terminal domain F542_RS03010 PF00883 Cytosol aminopeptidase family, catalytic domain F542_RS03020 PF14743 DNA ligase OB-like domain F542_RS03020 PF01068 ATP dependent DNA ligase domain F542_RS03025 PF02682 Carboxyltransferase domain, subdomain C and D F542_RS03030 PF02626 Carboxyltransferase domain, subdomain A and B F542_RS03035 PF03746 LamB/YcsF family F542_RS03040 PF01566 Natural resistance-associated macrophage protein F542_RS03045 PF04277 Oxaloacetate decarboxylase, gamma chain F542_RS03050 PF00364 Biotin-requiring enzyme F542_RS03050 PF00682 HMGL-like F542_RS03050 PF02436 Conserved carboxylase domain F542_RS03055 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F542_RS03060 PF03831 PhnA domain F542_RS03060 PF08274 PhnA Zinc-Ribbon F542_RS03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS03065 PF03466 LysR substrate binding domain F542_RS03080 PF11412 Disulphide bond corrector protein DsbC F542_RS03080 PF02683 Cytochrome C biogenesis protein transmembrane region F542_RS03080 PF13098 Thioredoxin-like domain F542_RS03085 PF00005 ABC transporter F542_RS03090 PF00497 Bacterial extracellular solute-binding proteins, family 3 F542_RS03095 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS03100 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS03105 PF02627 Carboxymuconolactone decarboxylase family F542_RS03110 PF12833 Helix-turn-helix domain F542_RS03110 PF12852 Cupin F542_RS03115 PF02698 DUF218 domain F542_RS03120 PF02348 Cytidylyltransferase F542_RS03125 PF01943 Polysaccharide biosynthesis protein F542_RS03130 PF07922 Glycosyltransferase family 52 F542_RS03135 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) F542_RS03145 PF00535 Glycosyl transferase family 2 F542_RS03150 PF00535 Glycosyl transferase family 2 F542_RS03155 PF00403 Heavy-metal-associated domain F542_RS03165 PF01841 Transglutaminase-like superfamily F542_RS03170 PF14840 Processivity clamp loader gamma complex DNA pol III C-term F542_RS03170 PF06144 DNA polymerase III, delta subunit F542_RS03175 PF04390 Lipopolysaccharide-assembly F542_RS03180 PF08264 Anticodon-binding domain of tRNA F542_RS03180 PF00133 tRNA synthetases class I (I, L, M and V) F542_RS03180 PF13603 Leucyl-tRNA synthetase, Domain 2 F542_RS03185 PF02824 TGS domain F542_RS03185 PF03129 Anticodon binding domain F542_RS03185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F542_RS03185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F542_RS03190 PF05198 Translation initiation factor IF-3, N-terminal domain F542_RS03190 PF00707 Translation initiation factor IF-3, C-terminal domain F542_RS03195 PF01632 Ribosomal protein L35 F542_RS03200 PF00453 Ribosomal protein L20 F542_RS03215 PF00005 ABC transporter F542_RS03220 PF02653 Branched-chain amino acid transport system / permease component F542_RS03225 PF10688 Bacterial inner membrane protein F542_RS03230 PF02355 Protein export membrane protein F542_RS03230 PF07549 SecD/SecF GG Motif F542_RS03235 PF02355 Protein export membrane protein F542_RS03235 PF13721 SecD export protein N-terminal TM region F542_RS03235 PF07549 SecD/SecF GG Motif F542_RS03240 PF02699 Preprotein translocase subunit F542_RS03245 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) F542_RS03250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS03250 PF03466 LysR substrate binding domain F542_RS03255 PF01063 Amino-transferase class IV F542_RS03260 PF01042 Endoribonuclease L-PSP F542_RS03265 PF13419 Haloacid dehalogenase-like hydrolase F542_RS03270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS03270 PF03466 LysR substrate binding domain F542_RS03280 PF00085 Thioredoxin F542_RS03285 PF00860 Permease family F542_RS03290 PF00403 Heavy-metal-associated domain F542_RS03295 PF00403 Heavy-metal-associated domain F542_RS03300 PF01297 Zinc-uptake complex component A periplasmic F542_RS03305 PF00005 ABC transporter F542_RS03310 PF00950 ABC 3 transport family F542_RS03315 PF00950 ABC 3 transport family F542_RS03320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS03320 PF03466 LysR substrate binding domain F542_RS03325 PF07681 DoxX F542_RS03330 PF03741 Integral membrane protein TerC family F542_RS03335 PF03193 RsgA GTPase F542_RS03345 PF13538 UvrD-like helicase C-terminal domain F542_RS03350 PF02887 Pyruvate kinase, alpha/beta domain F542_RS03350 PF00224 Pyruvate kinase, barrel domain F542_RS03355 PF00300 Histidine phosphatase superfamily (branch 1) F542_RS03360 PF00288 GHMP kinases N terminal domain F542_RS03360 PF08544 GHMP kinases C terminal F542_RS03365 PF00696 Amino acid kinase family F542_RS03365 PF13840 ACT domain F542_RS03365 PF03447 Homoserine dehydrogenase, NAD binding domain F542_RS03365 PF01842 ACT domain F542_RS03365 PF00742 Homoserine dehydrogenase F542_RS03370 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin F542_RS03370 PF05662 Coiled stalk of trimeric autotransporter adhesin F542_RS03370 PF03895 YadA-like membrane anchor domain F542_RS03370 PF13018 Extended Signal Peptide of Type V secretion system F542_RS03370 PF13018 Extended Signal Peptide of Type V secretion system F542_RS03370 PF05662 Coiled stalk of trimeric autotransporter adhesin F542_RS03370 PF03895 YadA-like membrane anchor domain F542_RS03370 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin F542_RS03375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F542_RS03375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F542_RS03385 PF03466 LysR substrate binding domain F542_RS03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS03390 PF01197 Ribosomal protein L31 F542_RS03395 PF00456 Transketolase, thiamine diphosphate binding domain F542_RS03395 PF02780 Transketolase, C-terminal domain F542_RS03395 PF02779 Transketolase, pyrimidine binding domain F542_RS03400 PF03652 Holliday junction resolvase F542_RS03405 PF02622 Uncharacterized ACR, COG1678 F542_RS03410 PF04452 RNA methyltransferase F542_RS03415 PF03923 Uncharacterized lipoprotein F542_RS03420 PF01722 BolA-like protein F542_RS03430 PF04170 NlpE N-terminal domain F542_RS03435 PF05258 Dna[CI] antecedent, DciA F542_RS03445 PF01043 SecA preprotein cross-linking domain F542_RS03445 PF07516 SecA Wing and Scaffold domain F542_RS03445 PF07517 SecA DEAD-like domain F542_RS03445 PF02810 SEC-C motif F542_RS03450 PF00293 NUDIX domain F542_RS03455 PF00425 chorismate binding enzyme F542_RS03455 PF04715 Anthranilate synthase component I, N terminal region F542_RS03460 PF00117 Glutamine amidotransferase class-I F542_RS03465 PF14552 Tautomerase enzyme F542_RS03470 PF00591 Glycosyl transferase family, a/b domain F542_RS03470 PF02885 Glycosyl transferase family, helical bundle domain F542_RS03475 PF05661 Protein of unknown function (DUF808) F542_RS03480 PF08241 Methyltransferase domain F542_RS03485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F542_RS03490 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS03495 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS03495 PF12911 N-terminal TM domain of oligopeptide transport permease C F542_RS03500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F542_RS03500 PF00005 ABC transporter F542_RS03505 PF01553 Acyltransferase F542_RS03510 PF01726 LexA DNA binding domain F542_RS03510 PF00717 Peptidase S24-like F542_RS03515 PF01491 Frataxin-like domain F542_RS03520 PF00270 DEAD/DEAH box helicase F542_RS03520 PF00271 Helicase conserved C-terminal domain F542_RS03520 PF16124 RecQ zinc-binding F542_RS03520 PF00570 HRDC domain F542_RS03520 PF09382 RQC domain F542_RS03530 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) F542_RS03535 PF00113 Enolase, C-terminal TIM barrel domain F542_RS03535 PF03952 Enolase, N-terminal domain F542_RS03540 PF00005 ABC transporter F542_RS03545 PF12704 MacB-like periplasmic core domain F542_RS03545 PF02687 FtsX-like permease family F542_RS03550 PF16921 Tex protein YqgF-like domain F542_RS03550 PF09371 Tex-like protein N-terminal domain F542_RS03550 PF00575 S1 RNA binding domain F542_RS03550 PF17674 HHH domain F542_RS03555 PF00183 Hsp90 protein F542_RS03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F542_RS03560 PF08780 Nucleotidyltransferase substrate binding protein like F542_RS03565 PF01909 Nucleotidyltransferase domain F542_RS03570 PF00149 Calcineurin-like phosphoesterase F542_RS03575 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F542_RS03580 PF01743 Poly A polymerase head domain F542_RS03580 PF12627 Probable RNA and SrmB- binding site of polymerase A F542_RS03580 PF12626 Polymerase A arginine-rich C-terminus F542_RS03590 PF01258 Prokaryotic dksA/traR C4-type zinc finger F542_RS03595 PF10415 Fumarase C C-terminus F542_RS03595 PF00206 Lyase F542_RS03600 PF00535 Glycosyl transferase family 2 F542_RS03605 PF03180 NLPA lipoprotein F542_RS03610 PF03180 NLPA lipoprotein F542_RS03615 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS03620 PF09383 NIL domain F542_RS03620 PF00005 ABC transporter F542_RS03625 PF00764 Arginosuccinate synthase F542_RS03630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F542_RS03635 PF00535 Glycosyl transferase family 2 F542_RS03640 PF01985 CRS1 / YhbY (CRM) domain F542_RS03645 PF01569 PAP2 superfamily F542_RS03650 PF00480 ROK family F542_RS03655 PF00753 Metallo-beta-lactamase superfamily F542_RS03655 PF16123 Hydroxyacylglutathione hydrolase C-terminus F542_RS03660 PF01255 Putative undecaprenyl diphosphate synthase F542_RS03670 PF02163 Peptidase family M50 F542_RS03675 PF01103 Surface antigen F542_RS03675 PF07244 Surface antigen variable number repeat F542_RS03685 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F542_RS03685 PF00132 Bacterial transferase hexapeptide (six repeats) F542_RS03690 PF07977 FabA-like domain F542_RS03695 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F542_RS03695 PF00132 Bacterial transferase hexapeptide (six repeats) F542_RS03700 PF02233 NAD(P) transhydrogenase beta subunit F542_RS03705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F542_RS03705 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F542_RS03705 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F542_RS03715 PF04085 rod shape-determining protein MreC F542_RS03720 PF04093 rod shape-determining protein MreD F542_RS03725 PF00004 ATPase family associated with various cellular activities (AAA) F542_RS03725 PF16193 AAA C-terminal domain F542_RS03725 PF12002 MgsA AAA+ ATPase C terminal F542_RS03730 PF13307 Helicase C-terminal domain F542_RS03730 PF06733 DEAD_2 F542_RS03735 PF03788 LrgA family F542_RS03740 PF04172 LrgB-like family F542_RS03745 PF00005 ABC transporter F542_RS03745 PF00664 ABC transporter transmembrane region F542_RS03750 PF00521 DNA gyrase/topoisomerase IV, subunit A F542_RS03750 PF03989 DNA gyrase C-terminal domain, beta-propeller F542_RS03755 PF01027 Inhibitor of apoptosis-promoting Bax1 F542_RS03760 PF04358 DsrC like protein F542_RS03765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F542_RS03770 PF00793 DAHP synthetase I family F542_RS03775 PF02153 Prephenate dehydrogenase F542_RS03775 PF01817 Chorismate mutase type II F542_RS03780 PF04355 SmpA / OmlA family F542_RS03785 PF04245 37-kD nucleoid-associated bacterial protein F542_RS03790 PF01042 Endoribonuclease L-PSP F542_RS03795 PF02578 Multi-copper polyphenol oxidoreductase laccase F542_RS03800 PF04220 Der GTPase activator (YihI) F542_RS03805 PF10675 Protein of unknown function (DUF2489) F542_RS03810 PF06969 HemN C-terminal domain F542_RS03810 PF04055 Radical SAM superfamily F542_RS03815 PF03968 OstA-like protein F542_RS03815 PF04453 LPS transport system D F542_RS03820 PF04217 Protein of unknown function, DUF412 F542_RS03830 PF04279 Intracellular septation protein A F542_RS03835 PF03061 Thioesterase superfamily F542_RS03840 PF03795 YCII-related domain F542_RS03845 PF08335 GlnD PII-uridylyltransferase F542_RS03845 PF03710 Glutamate-ammonia ligase adenylyltransferase F542_RS03855 PF17188 MucB/RseB C-terminal domain F542_RS03855 PF03888 MucB/RseB N-terminal domain F542_RS03865 PF13193 AMP-binding enzyme C-terminal domain F542_RS03865 PF00501 AMP-binding enzyme F542_RS03870 PF00398 Ribosomal RNA adenine dimethylase F542_RS03875 PF09312 SurA N-terminal domain F542_RS03875 PF00639 PPIC-type PPIASE domain F542_RS03880 PF00294 pfkB family carbohydrate kinase F542_RS03880 PF01467 Cytidylyltransferase-like F542_RS03885 PF09827 CRISPR associated protein Cas2 F542_RS03890 PF01867 CRISPR associated protein Cas1 F542_RS03925 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F542_RS03925 PF01926 50S ribosome-binding GTPase F542_RS03930 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F542_RS03930 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F542_RS03930 PF01488 Shikimate / quinate 5-dehydrogenase F542_RS03935 PF13291 ACT domain F542_RS03935 PF04607 Region found in RelA / SpoT proteins F542_RS03935 PF02824 TGS domain F542_RS03940 PF00535 Glycosyl transferase family 2 F542_RS03945 PF13288 DXP reductoisomerase C-terminal domain F542_RS03945 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F542_RS03945 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F542_RS03955 PF13520 Amino acid permease F542_RS03960 PF02574 Homocysteine S-methyltransferase F542_RS03960 PF02965 Vitamin B12 dependent methionine synthase, activation domain F542_RS03960 PF02310 B12 binding domain F542_RS03960 PF02607 B12 binding domain F542_RS03960 PF00809 Pterin binding enzyme F542_RS03965 PF00438 S-adenosylmethionine synthetase, N-terminal domain F542_RS03965 PF02772 S-adenosylmethionine synthetase, central domain F542_RS03965 PF02773 S-adenosylmethionine synthetase, C-terminal domain F542_RS03975 PF00593 TonB dependent receptor F542_RS03975 PF07715 TonB-dependent Receptor Plug Domain F542_RS03980 PF00005 ABC transporter F542_RS03980 PF06472 ABC transporter transmembrane region 2 F542_RS03985 PF01765 Ribosome recycling factor F542_RS03990 PF13580 SIS domain F542_RS03995 PF09335 SNARE associated Golgi protein F542_RS04000 PF00356 Bacterial regulatory proteins, lacI family F542_RS04005 PF01266 FAD dependent oxidoreductase F542_RS04005 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F542_RS04010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F542_RS04010 PF02770 Acyl-CoA dehydrogenase, middle domain F542_RS04010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F542_RS04015 PF00860 Permease family F542_RS04020 PF01053 Cys/Met metabolism PLP-dependent enzyme F542_RS04025 PF00472 RF-1 domain F542_RS04025 PF03462 PCRF domain F542_RS04045 PF02146 Sir2 family F542_RS04065 PF02146 Sir2 family F542_RS04070 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F542_RS04075 PF03471 Transporter associated domain F542_RS04075 PF00571 CBS domain F542_RS04080 PF00795 Carbon-nitrogen hydrolase F542_RS04085 PF04542 Sigma-70 region 2 F542_RS04085 PF08281 Sigma-70, region 4 F542_RS04090 PF03873 Anti sigma-E protein RseA, C-terminal domain F542_RS04090 PF03872 Anti sigma-E protein RseA, N-terminal domain F542_RS04100 PF01227 GTP cyclohydrolase I F542_RS04105 PF01416 tRNA pseudouridine synthase F542_RS04110 PF00293 NUDIX domain F542_RS04115 PF01709 Transcriptional regulator F542_RS04120 PF02075 Crossover junction endodeoxyribonuclease RuvC F542_RS04125 PF01494 FAD binding domain F542_RS04130 PF00586 AIR synthase related protein, N-terminal domain F542_RS04130 PF02769 AIR synthase related protein, C-terminal domain F542_RS04135 PF03364 Polyketide cyclase / dehydrase and lipid transport F542_RS04140 PF03658 RnfH family Ubiquitin F542_RS04145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F542_RS04145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F542_RS04150 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F542_RS04155 PF04175 Protein of unknown function (DUF406) F542_RS04160 PF02082 Transcriptional regulator F542_RS04165 PF00266 Aminotransferase class-V F542_RS04170 PF01592 NifU-like N terminal domain F542_RS04175 PF01521 Iron-sulphur cluster biosynthesis F542_RS04180 PF07743 HSCB C-terminal oligomerisation domain F542_RS04185 PF10946 Protein of unknown function DUF2625 F542_RS04190 PF00012 Hsp70 protein F542_RS04200 PF00111 2Fe-2S iron-sulfur cluster binding domain F542_RS04205 PF04384 Iron-sulphur cluster assembly F542_RS04210 PF00768 D-alanyl-D-alanine carboxypeptidase F542_RS04215 PF08207 Elongation factor P (EF-P) KOW-like domain F542_RS04215 PF01132 Elongation factor P (EF-P) OB domain F542_RS04215 PF09285 Elongation factor P, C-terminal F542_RS04230 PF02441 Flavoprotein F542_RS04235 PF01641 SelR domain F542_RS04240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F542_RS04240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F542_RS04245 PF00348 Polyprenyl synthetase F542_RS04250 PF02609 Exonuclease VII small subunit F542_RS04255 PF03476 MOSC N-terminal beta barrel domain F542_RS04255 PF00111 2Fe-2S iron-sulfur cluster binding domain F542_RS04255 PF03473 MOSC domain F542_RS04260 PF02551 Acyl-CoA thioesterase F542_RS04265 PF08003 Protein of unknown function (DUF1698) F542_RS04270 PF00462 Glutaredoxin F542_RS04270 PF08534 Redoxin F542_RS04275 PF00311 Phosphoenolpyruvate carboxylase F542_RS04280 PF05175 Methyltransferase small domain F542_RS04285 PF01713 Smr domain F542_RS04295 PF18415 Histidine kinase receptor ArcB trans-membrane domain F542_RS04295 PF00072 Response regulator receiver domain F542_RS04295 PF00512 His Kinase A (phospho-acceptor) domain F542_RS04295 PF01627 Hpt domain F542_RS04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F542_RS04295 PF00989 PAS fold F542_RS04300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F542_RS04300 PF01138 3' exoribonuclease family, domain 1 F542_RS04300 PF00013 KH domain F542_RS04300 PF00575 S1 RNA binding domain F542_RS04300 PF03725 3' exoribonuclease family, domain 2 F542_RS04310 PF03880 DbpA RNA binding domain F542_RS04310 PF00270 DEAD/DEAH box helicase F542_RS04310 PF00271 Helicase conserved C-terminal domain F542_RS04315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F542_RS04325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F542_RS04325 PF00364 Biotin-requiring enzyme F542_RS04325 PF02817 e3 binding domain F542_RS04330 PF00676 Dehydrogenase E1 component F542_RS04330 PF16078 2-oxoglutarate dehydrogenase N-terminus F542_RS04330 PF16870 2-oxoglutarate dehydrogenase C-terminal F542_RS04330 PF02779 Transketolase, pyrimidine binding domain F542_RS04335 PF03222 Tryptophan/tyrosine permease family F542_RS04340 PF03315 Serine dehydratase beta chain F542_RS04340 PF03313 Serine dehydratase alpha chain F542_RS04345 PF04055 Radical SAM superfamily F542_RS04345 PF06969 HemN C-terminal domain F542_RS04350 PF00578 AhpC/TSA family F542_RS04360 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term F542_RS04360 PF14489 QueF-like protein F542_RS04375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F542_RS04380 PF03702 Anhydro-N-acetylmuramic acid kinase F542_RS04385 PF01380 SIS domain F542_RS04395 PF08335 GlnD PII-uridylyltransferase F542_RS04395 PF01966 HD domain F542_RS04395 PF03445 Putative nucleotidyltransferase DUF294 F542_RS04400 PF03796 DnaB-like helicase C terminal domain F542_RS04400 PF00772 DnaB-like helicase N terminal domain F542_RS04405 PF05166 YcgL domain F542_RS04410 PF00186 Dihydrofolate reductase F542_RS04415 PF02652 L-lactate permease F542_RS04420 PF02754 Cysteine-rich domain F542_RS04425 PF11870 Domain of unknown function (DUF3390) F542_RS04425 PF02589 LUD domain F542_RS04425 PF13183 4Fe-4S dicluster domain F542_RS04430 PF02589 LUD domain F542_RS04435 PF18364 Molybdopterin oxidoreductase N-terminal domain F542_RS04435 PF01568 Molydopterin dinucleotide binding domain F542_RS04435 PF00384 Molybdopterin oxidoreductase F542_RS04440 PF02547 Queuosine biosynthesis protein F542_RS04445 PF01933 Uncharacterised protein family UPF0052 F542_RS04450 PF01594 AI-2E family transporter F542_RS04455 PF13649 Methyltransferase domain F542_RS04460 PF03889 Alternative ribosome-rescue factor A F542_RS04465 PF02219 Methylenetetrahydrofolate reductase F542_RS04470 PF00258 Flavodoxin F542_RS04470 PF00667 FAD binding domain F542_RS04470 PF00175 Oxidoreductase NAD-binding domain F542_RS04475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F542_RS04475 PF08447 PAS fold F542_RS04480 PF08218 Citrate lyase ligase C-terminal domain F542_RS04485 PF06857 Malonate decarboxylase delta subunit (MdcD) F542_RS04490 PF03328 HpcH/HpaI aldolase/citrate lyase family F542_RS04495 PF04223 Citrate lyase, alpha subunit (CitF) F542_RS04500 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F542_RS04500 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase F542_RS04505 PF00939 Sodium:sulfate symporter transmembrane region F542_RS04510 PF00180 Isocitrate/isopropylmalate dehydrogenase F542_RS04515 PF06434 Aconitate hydratase 2 N-terminus F542_RS04515 PF00330 Aconitase family (aconitate hydratase) F542_RS04515 PF11791 Aconitate B N-terminal domain F542_RS04520 PF00285 Citrate synthase, C-terminal domain F542_RS04525 PF01784 NIF3 (NGG1p interacting factor 3) F542_RS04530 PF00005 ABC transporter F542_RS04530 PF02687 FtsX-like permease family F542_RS04530 PF12704 MacB-like periplasmic core domain F542_RS04535 PF16527 Two-component sensor protein CpxA, periplasmic domain F542_RS04535 PF00672 HAMP domain F542_RS04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F542_RS04535 PF00512 His Kinase A (phospho-acceptor) domain F542_RS04540 PF00072 Response regulator receiver domain F542_RS04540 PF00486 Transcriptional regulatory protein, C terminal F542_RS04545 PF03819 MazG nucleotide pyrophosphohydrolase domain F542_RS04550 PF02541 Ppx/GppA phosphatase family F542_RS04555 PF03883 Peroxide stress protein YaaA F542_RS04565 PF01545 Cation efflux family F542_RS04565 PF16916 Dimerisation domain of Zinc Transporter F542_RS04570 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) F542_RS04595 PF01386 Ribosomal L25p family F542_RS04600 PF00343 Carbohydrate phosphorylase F542_RS04605 PF00325 Bacterial regulatory proteins, crp family F542_RS04605 PF00027 Cyclic nucleotide-binding domain F542_RS04610 PF00265 Thymidine kinase F542_RS04615 PF06005 Cell division protein ZapB F542_RS04620 PF04241 Protein of unknown function (DUF423) F542_RS04625 PF01728 FtsJ-like methyltransferase F542_RS04625 PF18125 RlmM ferredoxin-like domain F542_RS04630 PF01113 Dihydrodipicolinate reductase, N-terminus F542_RS04630 PF05173 Dihydrodipicolinate reductase, C-terminus F542_RS04635 PF01053 Cys/Met metabolism PLP-dependent enzyme F542_RS04640 PF13649 Methyltransferase domain F542_RS04645 PF04247 Invasion gene expression up-regulator, SirB F542_RS04650 PF04751 Protein of unknown function (DUF615) F542_RS04655 PF01523 Putative modulator of DNA gyrase F542_RS04660 PF02080 TrkA-C domain F542_RS04660 PF06826 Predicted Permease Membrane Region F542_RS04665 PF06062 Uncharacterised protein family (UPF0231) F542_RS04670 PF02872 5'-nucleotidase, C-terminal domain F542_RS04670 PF00149 Calcineurin-like phosphoesterase F542_RS04675 PF01219 Prokaryotic diacylglycerol kinase F542_RS04680 PF00375 Sodium:dicarboxylate symporter family F542_RS04685 PF03772 Competence protein F542_RS04685 PF13567 Domain of unknown function (DUF4131) F542_RS04685 PF00753 Metallo-beta-lactamase superfamily F542_RS04690 PF01612 3'-5' exonuclease F542_RS04690 PF00476 DNA polymerase family A F542_RS04690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F542_RS04690 PF01367 5'-3' exonuclease, C-terminal SAM fold F542_RS04695 PF00155 Aminotransferase class I and II F542_RS04705 PF05872 Bacterial protein of unknown function (DUF853) F542_RS04715 PF00271 Helicase conserved C-terminal domain F542_RS04715 PF00270 DEAD/DEAH box helicase F542_RS04720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F542_RS04720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F542_RS04725 PF00464 Serine hydroxymethyltransferase F542_RS04735 PF00300 Histidine phosphatase superfamily (branch 1) F542_RS04740 PF00849 RNA pseudouridylate synthase F542_RS04750 PF03922 OmpW family F542_RS04755 PF00117 Glutamine amidotransferase class-I F542_RS04755 PF00958 GMP synthase C terminal domain F542_RS04755 PF02540 NAD synthase F542_RS04765 PF00571 CBS domain F542_RS04765 PF00478 IMP dehydrogenase / GMP reductase domain F542_RS04770 PF00534 Glycosyl transferases group 1 F542_RS04770 PF08323 Starch synthase catalytic domain F542_RS04775 PF00483 Nucleotidyl transferase F542_RS04780 PF18390 Glycogen debranching enzyme C-terminal domain F542_RS04780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F542_RS04780 PF00128 Alpha amylase, catalytic domain F542_RS04785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F542_RS04785 PF02806 Alpha amylase, C-terminal all-beta domain F542_RS04785 PF00128 Alpha amylase, catalytic domain F542_RS04790 PF03239 Iron permease FTR1 family F542_RS04795 PF04261 Dyp-type peroxidase family F542_RS04795 PF10518 TAT (twin-arginine translocation) pathway signal sequence F542_RS04800 PF09375 Imelysin F542_RS04815 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain F542_RS04815 PF00749 tRNA synthetases class I (E and Q), catalytic domain F542_RS04820 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F542_RS04830 PF02576 RimP N-terminal domain F542_RS04830 PF17384 RimP C-terminal SH3 domain F542_RS04835 PF00575 S1 RNA binding domain F542_RS04835 PF08529 NusA N-terminal domain F542_RS04835 PF13184 NusA-like KH domain F542_RS04840 PF00009 Elongation factor Tu GTP binding domain F542_RS04840 PF11987 Translation-initiation factor 2 F542_RS04840 PF08364 Bacterial translation initiation factor IF-2 associated region F542_RS04840 PF04760 Translation initiation factor IF-2, N-terminal region F542_RS04845 PF01810 LysE type translocator F542_RS04850 PF00485 Phosphoribulokinase / Uridine kinase family F542_RS04855 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) F542_RS04860 PF10431 C-terminal, D2-small domain, of ClpB protein F542_RS04860 PF17871 AAA lid domain F542_RS04860 PF07724 AAA domain (Cdc48 subfamily) F542_RS04860 PF02861 Clp amino terminal domain, pathogenicity island component F542_RS04860 PF00004 ATPase family associated with various cellular activities (AAA) F542_RS04865 PF01966 HD domain F542_RS04865 PF01743 Poly A polymerase head domain F542_RS04865 PF12627 Probable RNA and SrmB- binding site of polymerase A F542_RS04870 PF04381 Putative exonuclease, RdgC F542_RS04875 PF03807 NADP oxidoreductase coenzyme F420-dependent F542_RS04875 PF14748 Pyrroline-5-carboxylate reductase dimerisation F542_RS04880 PF12832 MFS_1 like family F542_RS04885 PF00156 Phosphoribosyl transferase domain F542_RS04890 PF12170 DNA polymerase III tau subunit V interacting with alpha F542_RS04890 PF12169 DNA polymerase III subunits gamma and tau domain III F542_RS04895 PF00005 ABC transporter F542_RS04900 PF01061 ABC-2 type transporter F542_RS04905 PF00149 Calcineurin-like phosphoesterase F542_RS04905 PF02872 5'-nucleotidase, C-terminal domain F542_RS04910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F542_RS04915 PF01406 tRNA synthetases class I (C) catalytic domain F542_RS04915 PF09190 DALR domain F542_RS04925 PF10369 Small subunit of acetolactate synthase F542_RS04930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F542_RS04930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F542_RS04930 PF00205 Thiamine pyrophosphate enzyme, central domain F542_RS04935 PF00390 Malic enzyme, N-terminal domain F542_RS04935 PF03949 Malic enzyme, NAD binding domain F542_RS04935 PF01515 Phosphate acetyl/butaryl transferase F542_RS04940 PF17287 POTRA domain F542_RS04940 PF08479 POTRA domain, ShlB-type F542_RS04940 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F542_RS04945 PF05860 haemagglutination activity domain F542_RS04945 PF13332 Hemagglutinin repeat F542_RS04945 PF05860 haemagglutination activity domain F542_RS04945 PF13332 Hemagglutinin repeat F542_RS04945 PF13018 Extended Signal Peptide of Type V secretion system F542_RS04945 PF13018 Extended Signal Peptide of Type V secretion system F542_RS04945 PF04829 Pre-toxin domain with VENN motif F542_RS04945 PF04829 Pre-toxin domain with VENN motif F542_RS04955 PF05860 haemagglutination activity domain F542_RS04955 PF05594 Haemagluttinin repeat F542_RS04955 PF15526 Novel toxin 21 F542_RS04955 PF13332 Hemagglutinin repeat F542_RS04955 PF04829 Pre-toxin domain with VENN motif F542_RS04960 PF03222 Tryptophan/tyrosine permease family F542_RS04965 PF01464 Transglycosylase SLT domain F542_RS04965 PF14718 Soluble lytic murein transglycosylase L domain F542_RS04970 PF00156 Phosphoribosyl transferase domain F542_RS04975 PF01336 OB-fold nucleic acid binding domain F542_RS04975 PF00152 tRNA synthetases class II (D, K and N) F542_RS04980 PF18766 SWI2/SNF2 ATPase F542_RS04980 PF11867 Domain of unknown function (DUF3387) F542_RS04980 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) F542_RS04995 PF01420 Type I restriction modification DNA specificity domain F542_RS05000 PF02384 N-6 DNA Methylase F542_RS05005 PF00132 Bacterial transferase hexapeptide (six repeats) F542_RS05005 PF12804 MobA-like NTP transferase domain F542_RS05010 PF00318 Ribosomal protein S2 F542_RS05015 PF00889 Elongation factor TS F542_RS05020 PF00696 Amino acid kinase family F542_RS05025 PF00158 Sigma-54 interaction domain F542_RS05025 PF18024 Helix-turn-helix domain F542_RS05030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F542_RS05035 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS05040 PF12911 N-terminal TM domain of oligopeptide transport permease C F542_RS05040 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS05045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F542_RS05045 PF00005 ABC transporter F542_RS05050 PF01751 Toprim domain F542_RS05050 PF01131 DNA topoisomerase F542_RS05050 PF08272 Topoisomerase I zinc-ribbon-like F542_RS05050 PF01396 Topoisomerase DNA binding C4 zinc finger F542_RS05065 PF01040 UbiA prenyltransferase family F542_RS05070 PF08220 DeoR-like helix-turn-helix domain F542_RS05070 PF00455 DeoR C terminal sensor domain F542_RS05075 PF00206 Lyase F542_RS05075 PF08328 Adenylosuccinate lyase C-terminal F542_RS05080 PF04356 Protein of unknown function (DUF489) F542_RS05085 PF05362 Lon protease (S16) C-terminal proteolytic domain F542_RS05085 PF02190 ATP-dependent protease La (LON) substrate-binding domain F542_RS05085 PF00004 ATPase family associated with various cellular activities (AAA) F542_RS05090 PF01668 SmpB protein F542_RS05095 PF02403 Seryl-tRNA synthetase N-terminal domain F542_RS05095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F542_RS05100 PF04216 Protein involved in formate dehydrogenase formation F542_RS05105 PF00196 Bacterial regulatory proteins, luxR family F542_RS05105 PF00072 Response regulator receiver domain F542_RS05110 PF03264 NapC/NirT cytochrome c family, N-terminal region F542_RS05120 PF01717 Cobalamin-independent synthase, Catalytic domain F542_RS05120 PF08267 Cobalamin-independent synthase, N-terminal domain F542_RS05125 PF01568 Molydopterin dinucleotide binding domain F542_RS05125 PF00384 Molybdopterin oxidoreductase F542_RS05125 PF18364 Molybdopterin oxidoreductase N-terminal domain F542_RS05130 PF00730 HhH-GPD superfamily base excision DNA repair protein F542_RS05130 PF10576 Iron-sulfur binding domain of endonuclease III F542_RS05130 PF00633 Helix-hairpin-helix motif F542_RS05135 PF01925 Sulfite exporter TauE/SafE F542_RS05140 PF01472 PUA domain F542_RS05140 PF00696 Amino acid kinase family F542_RS05145 PF00440 Bacterial regulatory proteins, tetR family F542_RS05150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F542_RS05155 PF00873 AcrB/AcrD/AcrF family F542_RS05160 PF01555 DNA methylase F542_RS05160 PF18273 Type III R-M EcoP15I C-terminal domain F542_RS05165 PF04851 Type III restriction enzyme, res subunit F542_RS05165 PF08774 VRR-NUC domain F542_RS05170 PF00561 alpha/beta hydrolase fold F542_RS05175 PF03925 SeqA protein C-terminal domain F542_RS05175 PF17206 SeqA protein N-terminal domain F542_RS05180 PF00501 AMP-binding enzyme F542_RS05185 PF12795 Mechanosensitive ion channel porin domain F542_RS05185 PF00924 Mechanosensitive ion channel F542_RS05185 PF12794 Mechanosensitive ion channel inner membrane domain 1 F542_RS05190 PF01264 Chorismate synthase F542_RS05200 PF13609 Gram-negative porin F542_RS05205 PF02542 YgbB family F542_RS05210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F542_RS05215 PF04977 Septum formation initiator F542_RS05220 PF01293 Phosphoenolpyruvate carboxykinase F542_RS05225 PF17763 Glutaminase/Asparaginase C-terminal domain F542_RS05225 PF00710 Asparaginase, N-terminal F542_RS05230 PF00456 Transketolase, thiamine diphosphate binding domain F542_RS05230 PF17831 Pyruvate dehydrogenase E1 component middle domain F542_RS05235 PF02817 e3 binding domain F542_RS05235 PF00364 Biotin-requiring enzyme F542_RS05235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F542_RS05240 PF07992 Pyridine nucleotide-disulphide oxidoreductase F542_RS05240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F542_RS05245 PF00582 Universal stress protein family F542_RS05250 PF01411 tRNA synthetases class II (A) F542_RS05250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F542_RS05250 PF02272 DHHA1 domain F542_RS05255 PF02599 Global regulator protein family F542_RS05260 PF00483 Nucleotidyl transferase F542_RS05265 PF13180 PDZ domain F542_RS05270 PF02224 Cytidylate kinase F542_RS05275 PF00575 S1 RNA binding domain F542_RS05280 PF00216 Bacterial DNA-binding protein F542_RS05285 PF06305 Lipopolysaccharide assembly protein A domain F542_RS05290 PF18073 Rubredoxin metal binding domain F542_RS05295 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F542_RS05300 PF01253 Translation initiation factor SUI1 F542_RS05310 PF01047 MarR family F542_RS05310 PF00480 ROK family F542_RS05315 PF01612 3'-5' exonuclease F542_RS05315 PF00570 HRDC domain F542_RS05320 PF00871 Acetokinase family F542_RS05325 PF07085 DRTGG domain F542_RS05325 PF01515 Phosphate acetyl/butaryl transferase F542_RS05330 PF01565 FAD binding domain F542_RS05330 PF09330 D-lactate dehydrogenase, membrane binding F542_RS05335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F542_RS05340 PF00155 Aminotransferase class I and II F542_RS05345 PF01259 SAICAR synthetase F542_RS05350 PF00156 Phosphoribosyl transferase domain F542_RS05350 PF13537 Glutamine amidotransferase domain F542_RS05355 PF00586 AIR synthase related protein, N-terminal domain F542_RS05355 PF02769 AIR synthase related protein, C-terminal domain F542_RS05360 PF00551 Formyl transferase F542_RS05365 PF02142 MGS-like domain F542_RS05365 PF01808 AICARFT/IMPCHase bienzyme F542_RS05370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F542_RS05370 PF02844 Phosphoribosylglycinamide synthetase, N domain F542_RS05370 PF02843 Phosphoribosylglycinamide synthetase, C domain F542_RS05380 PF00731 AIR carboxylase F542_RS05385 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F542_RS05385 PF02222 ATP-grasp domain F542_RS05395 PF00266 Aminotransferase class-V F542_RS05405 PF05195 Aminopeptidase P, N-terminal domain F542_RS05405 PF00557 Metallopeptidase family M24 F542_RS05410 PF01131 DNA topoisomerase F542_RS05410 PF01751 Toprim domain F542_RS05415 PF03411 Penicillin-insensitive murein endopeptidase F542_RS05420 PF00696 Amino acid kinase family F542_RS05420 PF01842 ACT domain F542_RS05425 PF00814 Glycoprotease family F542_RS05430 PF00793 DAHP synthetase I family F542_RS05435 PF04228 Putative neutral zinc metallopeptidase F542_RS05445 PF17854 FtsK alpha domain F542_RS05445 PF09397 Ftsk gamma domain F542_RS05445 PF01580 FtsK/SpoIIIE family F542_RS05445 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F542_RS05450 PF01037 Lrp/AsnC ligand binding domain F542_RS05455 PF03222 Tryptophan/tyrosine permease family F542_RS05460 PF06480 FtsH Extracellular F542_RS05460 PF01434 Peptidase family M41 F542_RS05460 PF17862 AAA+ lid domain F542_RS05460 PF00004 ATPase family associated with various cellular activities (AAA) F542_RS05465 PF01728 FtsJ-like methyltransferase F542_RS05475 PF17876 Cold shock domain F542_RS05475 PF00773 RNB domain F542_RS05475 PF00575 S1 RNA binding domain F542_RS05475 PF08206 Ribonuclease B OB domain F542_RS05480 PF00593 TonB dependent receptor F542_RS05480 PF07715 TonB-dependent Receptor Plug Domain F542_RS05490 PF04575 Protein of unknown function (DUF560) F542_RS05495 PF00149 Calcineurin-like phosphoesterase F542_RS05505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F542_RS05510 PF01272 Transcription elongation factor, GreA/GreB, C-term F542_RS05510 PF03449 Transcription elongation factor, N-terminal F542_RS05515 PF13742 OB-fold nucleic acid binding domain F542_RS05515 PF02601 Exonuclease VII, large subunit F542_RS05520 PF02613 Nitrate reductase delta subunit F542_RS05525 PF00037 4Fe-4S binding domain F542_RS05525 PF12838 4Fe-4S dicluster domain F542_RS05530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F542_RS05530 PF01568 Molydopterin dinucleotide binding domain F542_RS05530 PF00384 Molybdopterin oxidoreductase F542_RS05535 PF13247 4Fe-4S dicluster domain F542_RS05535 PF12800 4Fe-4S binding domain F542_RS05540 PF04976 DMSO reductase anchor subunit (DmsC) F542_RS05555 PF12833 Helix-turn-helix domain F542_RS05555 PF02311 AraC-like ligand binding domain F542_RS05560 PF04055 Radical SAM superfamily F542_RS05560 PF06463 Molybdenum Cofactor Synthesis C F542_RS05565 PF01967 MoaC family F542_RS05570 PF00588 SpoU rRNA Methylase family F542_RS05580 PF04386 Stringent starvation protein B F542_RS05585 PF00043 Glutathione S-transferase, C-terminal domain F542_RS05585 PF02798 Glutathione S-transferase, N-terminal domain F542_RS05590 PF04363 Protein of unknown function (DUF496) F542_RS05595 PF13406 Transglycosylase SLT domain F542_RS05600 PF16198 tRNA pseudouridylate synthase B C-terminal domain F542_RS05600 PF09157 Pseudouridine synthase II TruB, C-terminal F542_RS05600 PF01509 TruB family pseudouridylate synthase (N terminal domain) F542_RS05605 PF02033 Ribosome-binding factor A F542_RS05610 PF00005 ABC transporter F542_RS05615 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS05620 PF09084 NMT1/THI5 like F542_RS05625 PF02110 Hydroxyethylthiazole kinase family F542_RS05630 PF08543 Phosphomethylpyrimidine kinase F542_RS05635 PF02581 Thiamine monophosphate synthase F542_RS05640 PF00083 Sugar (and other) transporter F542_RS05645 PF00152 tRNA synthetases class II (D, K and N) F542_RS05645 PF01336 OB-fold nucleic acid binding domain F542_RS05650 PF01751 Toprim domain F542_RS05650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F542_RS05650 PF00986 DNA gyrase B subunit, carboxyl terminus F542_RS05650 PF00204 DNA gyrase B F542_RS05650 PF18053 DNA gyrase B subunit insert domain F542_RS05655 PF02634 FdhD/NarQ family F542_RS05660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F542_RS05660 PF01568 Molydopterin dinucleotide binding domain F542_RS05660 PF00384 Molybdopterin oxidoreductase F542_RS05665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F542_RS05665 PF01568 Molydopterin dinucleotide binding domain F542_RS05665 PF00384 Molybdopterin oxidoreductase F542_RS05670 PF13247 4Fe-4S dicluster domain F542_RS05670 PF09163 Formate dehydrogenase N, transmembrane F542_RS05675 PF01292 Prokaryotic cytochrome b561 F542_RS05680 PF00005 ABC transporter F542_RS05680 PF00664 ABC transporter transmembrane region F542_RS05685 PF00664 ABC transporter transmembrane region F542_RS05685 PF00005 ABC transporter F542_RS05690 PF04357 TamB, inner membrane protein subunit of TAM complex F542_RS05695 PF01103 Surface antigen F542_RS05695 PF17243 POTRA domain TamA domain 1 F542_RS05700 PF01551 Peptidase family M23 F542_RS05705 PF00380 Ribosomal protein S9/S16 F542_RS05710 PF00572 Ribosomal protein L13 F542_RS05720 PF06295 Protein of unknown function (DUF1043) F542_RS05725 PF00436 Single-strand binding protein family F542_RS05730 PF17760 UvrA interaction domain F542_RS05730 PF17755 UvrA DNA-binding domain F542_RS05735 PF00268 Ribonucleotide reductase, small chain F542_RS05740 PF00317 Ribonucleotide reductase, all-alpha domain F542_RS05740 PF02867 Ribonucleotide reductase, barrel domain F542_RS05740 PF03477 ATP cone domain F542_RS05750 PF17757 UvrB interaction domain F542_RS05750 PF02151 UvrB/uvrC motif F542_RS05750 PF00271 Helicase conserved C-terminal domain F542_RS05750 PF04851 Type III restriction enzyme, res subunit F542_RS05750 PF12344 Ultra-violet resistance protein B F542_RS05770 PF12344 Ultra-violet resistance protein B F542_RS05770 PF04851 Type III restriction enzyme, res subunit F542_RS05770 PF17757 UvrB interaction domain F542_RS05770 PF00271 Helicase conserved C-terminal domain F542_RS05770 PF02151 UvrB/uvrC motif F542_RS05775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F542_RS05775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F542_RS05785 PF07119 Protein of unknown function (DUF1375) F542_RS05790 PF00180 Isocitrate/isopropylmalate dehydrogenase F542_RS05795 PF08240 Alcohol dehydrogenase GroES-like domain F542_RS05795 PF13823 Alcohol dehydrogenase GroES-associated F542_RS05795 PF00107 Zinc-binding dehydrogenase F542_RS05800 PF16868 NMT1-like family F542_RS05815 PF01206 Sulfurtransferase TusA F542_RS05820 PF01814 Hemerythrin HHE cation binding domain F542_RS05825 PF01702 Queuine tRNA-ribosyltransferase F542_RS05840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F542_RS05840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F542_RS05845 PF00701 Dihydrodipicolinate synthetase family F542_RS05855 PF00691 OmpA family F542_RS05860 PF01368 DHH family F542_RS05860 PF02272 DHHA1 domain F542_RS05860 PF17768 RecJ OB domain F542_RS05865 PF10411 Disulfide bond isomerase protein N-terminus F542_RS05865 PF13098 Thioredoxin-like domain F542_RS05870 PF04225 Opacity-associated protein A LysM-like domain F542_RS05870 PF01551 Peptidase family M23 F542_RS05875 PF00005 ABC transporter F542_RS05880 PF00950 ABC 3 transport family F542_RS05885 PF13230 Glutamine amidotransferases class-II F542_RS05890 PF06725 3D domain F542_RS05890 PF03562 MltA specific insert domain F542_RS05895 PF13407 Periplasmic binding protein domain F542_RS05900 PF05127 Helicase F542_RS05900 PF17176 tRNA-binding domain F542_RS05900 PF13718 GNAT acetyltransferase 2 F542_RS05905 PF02130 Uncharacterized protein family UPF0054 F542_RS05910 PF02391 MoaE protein F542_RS05915 PF02597 ThiS family F542_RS05920 PF00521 DNA gyrase/topoisomerase IV, subunit A F542_RS05920 PF03989 DNA gyrase C-terminal domain, beta-propeller F542_RS05925 PF17848 Acetyl-coA carboxylase zinc finger domain F542_RS05925 PF01039 Carboxyl transferase domain F542_RS05930 PF08245 Mur ligase middle domain F542_RS05935 PF02811 PHP domain F542_RS05945 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase F542_RS05950 PF08411 Exonuclease C-terminal F542_RS05950 PF00929 Exonuclease F542_RS05955 PF03550 Outer membrane lipoprotein LolB F542_RS05960 PF08544 GHMP kinases C terminal F542_RS05960 PF00288 GHMP kinases N terminal domain F542_RS05965 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F542_RS05965 PF14572 Phosphoribosyl synthetase-associated domain F542_RS05970 PF01180 Dihydroorotate dehydrogenase F542_RS05990 PF16330 MukB hinge domain F542_RS05990 PF04310 MukB N-terminal F542_RS05995 PF04288 MukE-like family F542_RS06000 PF17192 MukF middle domain F542_RS06000 PF17193 MukF C-terminal domain F542_RS06000 PF03882 MukF winged-helix domain F542_RS06005 PF08443 RimK-like ATP-grasp domain F542_RS06005 PF18030 RimK PreATP-grasp domain F542_RS06010 PF00912 Transglycosylase F542_RS06015 PF01371 Trp repressor protein F542_RS06020 PF03548 Outer membrane lipoprotein carrier protein LolA F542_RS06030 PF00313 'Cold-shock' DNA-binding domain F542_RS06035 PF00484 Carbonic anhydrase F542_RS06040 PF07208 Protein of unknown function (DUF1414) F542_RS06045 PF11893 Domain of unknown function (DUF3413) F542_RS06045 PF00884 Sulfatase F542_RS06050 PF00877 NlpC/P60 family F542_RS06055 PF00216 Bacterial DNA-binding protein F542_RS06060 PF03483 B3/4 domain F542_RS06060 PF03147 Ferredoxin-fold anticodon binding domain F542_RS06060 PF03484 tRNA synthetase B5 domain F542_RS06060 PF01588 Putative tRNA binding domain F542_RS06060 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F542_RS06065 PF01409 tRNA synthetases class II core domain (F) F542_RS06065 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F542_RS06070 PF01865 Protein of unknown function DUF47 F542_RS06075 PF01384 Phosphate transporter family F542_RS06080 PF08239 Bacterial SH3 domain F542_RS06085 PF13416 Bacterial extracellular solute-binding protein F542_RS06090 PF10150 Ribonuclease E/G family F542_RS06090 PF00575 S1 RNA binding domain F542_RS06100 PF13597 Anaerobic ribonucleoside-triphosphate reductase F542_RS06100 PF03477 ATP cone domain F542_RS06105 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding F542_RS06105 PF18381 YcaO cyclodehydratase C-terminal domain F542_RS06110 PF04055 Radical SAM superfamily F542_RS06120 PF03840 Preprotein translocase SecG subunit F542_RS06125 PF00701 Dihydrodipicolinate synthetase family F542_RS06130 PF01418 Helix-turn-helix domain, rpiR family F542_RS06130 PF01380 SIS domain F542_RS06135 PF04074 YhcH/YjgK/YiaL F542_RS06140 PF03372 Endonuclease/Exonuclease/phosphatase family F542_RS06145 PF03553 Na+/H+ antiporter family F542_RS06145 PF13726 Na+-H+ antiporter family F542_RS06150 PF01171 PP-loop family F542_RS06160 PF00378 Enoyl-CoA hydratase/isomerase F542_RS06160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F542_RS06160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F542_RS06165 PF02803 Thiolase, C-terminal domain F542_RS06165 PF00108 Thiolase, N-terminal domain F542_RS06190 PF04829 Pre-toxin domain with VENN motif F542_RS06190 PF05860 haemagglutination activity domain F542_RS06190 PF13018 Extended Signal Peptide of Type V secretion system F542_RS06190 PF13332 Hemagglutinin repeat F542_RS06195 PF02674 Colicin V production protein F542_RS06200 PF00890 FAD binding domain F542_RS06200 PF02910 Fumarate reductase flavoprotein C-term F542_RS06205 PF00005 ABC transporter F542_RS06205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F542_RS06210 PF00005 ABC transporter F542_RS06210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F542_RS06215 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS06220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F542_RS06225 PF00075 RNase H F542_RS06230 PF00816 H-NS histone family F542_RS06235 PF03553 Na+/H+ antiporter family F542_RS06240 PF18073 Rubredoxin metal binding domain F542_RS06245 PF07963 Prokaryotic N-terminal methylation motif F542_RS06250 PF00437 Type II/IV secretion system protein F542_RS06250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F542_RS06255 PF00482 Type II secretion system (T2SS), protein F F542_RS06265 PF01121 Dephospho-CoA kinase F542_RS06270 PF03884 DNA gyrase inhibitor YacG F542_RS06280 PF01494 FAD binding domain F542_RS06285 PF03668 P-loop ATPase protein family F542_RS06290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F542_RS06295 PF00005 ABC transporter F542_RS06295 PF12399 Branched-chain amino acid ATP-binding cassette transporter F542_RS06300 PF03968 OstA-like protein F542_RS06310 PF02698 DUF218 domain F542_RS06315 PF00561 alpha/beta hydrolase fold F542_RS06320 PF11967 Recombination protein O N terminal F542_RS06320 PF02565 Recombination protein O C terminal F542_RS06325 PF01926 50S ribosome-binding GTPase F542_RS06325 PF07650 KH domain F542_RS06330 PF14622 Ribonuclease-III-like F542_RS06330 PF00035 Double-stranded RNA binding motif F542_RS06335 PF10502 Signal peptidase, peptidase S26 F542_RS06340 PF00679 Elongation factor G C-terminus F542_RS06340 PF06421 GTP-binding protein LepA C-terminus F542_RS06340 PF00009 Elongation factor Tu GTP binding domain F542_RS06340 PF03144 Elongation factor Tu domain 2 F542_RS06345 PF01235 Sodium:alanine symporter family F542_RS06350 PF03824 High-affinity nickel-transport protein F542_RS06355 PF06226 Protein of unknown function (DUF1007) F542_RS06360 PF00300 Histidine phosphatase superfamily (branch 1) F542_RS06370 PF00005 ABC transporter F542_RS06370 PF03459 TOBE domain F542_RS06375 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS06395 PF03459 TOBE domain F542_RS06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS06400 PF00290 Tryptophan synthase alpha chain F542_RS06405 PF00291 Pyridoxal-phosphate dependent enzyme F542_RS06410 PF10609 NUBPL iron-transfer P-loop NTPase F542_RS06415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F542_RS06420 PF01914 MarC family integral membrane protein F542_RS06425 PF00849 RNA pseudouridylate synthase F542_RS06425 PF01479 S4 domain F542_RS06430 PF07690 Major Facilitator Superfamily F542_RS06435 PF00330 Aconitase family (aconitate hydratase) F542_RS06440 PF00694 Aconitase C-terminal domain F542_RS06445 PF00106 short chain dehydrogenase F542_RS06450 PF03692 Putative zinc- or iron-chelating domain F542_RS06455 PF01906 Putative heavy-metal-binding F542_RS06460 PF01725 Ham1 family F542_RS06465 PF03279 Bacterial lipid A biosynthesis acyltransferase F542_RS06470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F542_RS06475 PF04960 Glutaminase F542_RS06480 PF01336 OB-fold nucleic acid binding domain F542_RS06480 PF00152 tRNA synthetases class II (D, K and N) F542_RS06480 PF02938 GAD domain F542_RS06485 PF01025 GrpE F542_RS06495 PF04284 Protein of unknown function (DUF441) F542_RS06500 PF04408 Helicase associated domain (HA2) F542_RS06500 PF00271 Helicase conserved C-terminal domain F542_RS06500 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold F542_RS06500 PF00270 DEAD/DEAH box helicase F542_RS06500 PF11898 Domain of unknown function (DUF3418) F542_RS06510 PF01145 SPFH domain / Band 7 family F542_RS06510 PF16200 C-terminal region of band_7 F542_RS06515 PF01168 Alanine racemase, N-terminal domain F542_RS06515 PF00842 Alanine racemase, C-terminal domain F542_RS06520 PF04317 YcjX-like family, DUF463 F542_RS06525 PF01928 CYTH domain F542_RS06535 PF00849 RNA pseudouridylate synthase F542_RS06540 PF04287 tRNA pseudouridine synthase C F542_RS06545 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F542_RS06545 PF00218 Indole-3-glycerol phosphate synthase F542_RS06555 PF00899 ThiF family F542_RS06560 PF00994 Probable molybdopterin binding domain F542_RS06560 PF03454 MoeA C-terminal region (domain IV) F542_RS06560 PF03453 MoeA N-terminal region (domain I and II) F542_RS06565 PF01914 MarC family integral membrane protein F542_RS06570 PF12848 ABC transporter F542_RS06570 PF00005 ABC transporter F542_RS06585 PF00108 Thiolase, N-terminal domain F542_RS06585 PF02803 Thiolase, C-terminal domain F542_RS06590 PF02667 Short chain fatty acid transporter F542_RS06595 PF01144 Coenzyme A transferase F542_RS06600 PF01144 Coenzyme A transferase F542_RS06605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS06605 PF03466 LysR substrate binding domain F542_RS06610 PF13378 Enolase C-terminal domain-like F542_RS06625 PF04011 LemA family F542_RS06630 PF05128 Domain of unknown function (DUF697) F542_RS06640 PF01909 Nucleotidyltransferase domain F542_RS06645 PF08780 Nucleotidyltransferase substrate binding protein like F542_RS06650 PF01207 Dihydrouridine synthase (Dus) F542_RS06655 PF05099 Tellurite resistance protein TerB F542_RS06655 PF00226 DnaJ domain F542_RS06660 PF00691 OmpA family F542_RS06665 PF07676 WD40-like Beta Propeller Repeat F542_RS06665 PF04052 TolB amino-terminal domain F542_RS06670 PF06519 TolA C-terminal F542_RS06675 PF02472 Biopolymer transport protein ExbD/TolR F542_RS06680 PF01618 MotA/TolQ/ExbB proton channel family F542_RS06685 PF03061 Thioesterase superfamily F542_RS06695 PF02322 Cytochrome bd terminal oxidase subunit II F542_RS06700 PF01654 Cytochrome bd terminal oxidase subunit I F542_RS06705 PF07219 HemY protein N-terminus F542_RS06710 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase F542_RS06715 PF02602 Uroporphyrinogen-III synthase HemD F542_RS06720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F542_RS06720 PF03900 Porphobilinogen deaminase, C-terminal domain F542_RS06725 PF01235 Sodium:alanine symporter family F542_RS06730 PF05958 tRNA (Uracil-5-)-methyltransferase F542_RS06735 PF00933 Glycosyl hydrolase family 3 N terminal domain F542_RS06740 PF02976 DNA mismatch repair enzyme MutH F542_RS06745 PF02463 RecF/RecN/SMC N terminal domain F542_RS06755 PF00892 EamA-like transporter family F542_RS06760 PF01513 ATP-NAD kinase F542_RS06765 PF00166 Chaperonin 10 Kd subunit F542_RS06770 PF00118 TCP-1/cpn60 chaperonin family F542_RS06775 PF00356 Bacterial regulatory proteins, lacI family F542_RS06780 PF16036 Chalcone isomerase-like F542_RS06785 PF04325 Protein of unknown function (DUF465) F542_RS06790 PF01281 Ribosomal protein L9, N-terminal domain F542_RS06790 PF03948 Ribosomal protein L9, C-terminal domain F542_RS06795 PF01084 Ribosomal protein S18 F542_RS06800 PF00436 Single-strand binding protein family F542_RS06805 PF01250 Ribosomal protein S6 F542_RS06815 PF01206 Sulfurtransferase TusA F542_RS06820 PF04143 Sulphur transport F542_RS06875 PF08479 POTRA domain, ShlB-type F542_RS06875 PF17287 POTRA domain F542_RS06875 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F542_RS06880 PF02635 DsrE/DsrF-like family F542_RS06885 PF00565 Staphylococcal nuclease homologue F542_RS06890 PF00266 Aminotransferase class-V F542_RS06895 PF01370 NAD dependent epimerase/dehydratase family F542_RS06900 PF00365 Phosphofructokinase F542_RS06905 PF02568 Thiamine biosynthesis protein (ThiI) F542_RS06905 PF02926 THUMP domain F542_RS06910 PF02321 Outer membrane efflux protein F542_RS06915 PF00625 Guanylate kinase F542_RS06920 PF00156 Phosphoribosyl transferase domain F542_RS06925 PF07687 Peptidase dimerisation domain F542_RS06925 PF01546 Peptidase family M20/M25/M40 F542_RS06930 PF13333 Integrase core domain F542_RS06930 PF00665 Integrase core domain F542_RS06935 PF07411 Domain of unknown function (DUF1508) F542_RS06980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F542_RS06980 PF00384 Molybdopterin oxidoreductase F542_RS06980 PF01568 Molydopterin dinucleotide binding domain F542_RS06990 PF13635 Domain of unknown function (DUF4143) F542_RS06990 PF13173 AAA domain F542_RS06995 PF03916 Polysulphide reductase, NrfD F542_RS07000 PF13247 4Fe-4S dicluster domain F542_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F542_RS07010 PF00512 His Kinase A (phospho-acceptor) domain F542_RS07015 PF00196 Bacterial regulatory proteins, luxR family F542_RS07015 PF00072 Response regulator receiver domain F542_RS07020 PF18470 Cas9 alpha-helical lobe domain F542_RS07020 PF18541 RuvC endonuclease subdomain 3 F542_RS07020 PF13395 HNH endonuclease F542_RS07025 PF01867 CRISPR associated protein Cas1 F542_RS07030 PF09827 CRISPR associated protein Cas2 F542_RS07035 PF00155 Aminotransferase class I and II F542_RS07035 PF00392 Bacterial regulatory proteins, gntR family F542_RS07040 PF01680 SOR/SNZ family F542_RS07045 PF01174 SNO glutamine amidotransferase family F542_RS07050 PF00455 DeoR C terminal sensor domain F542_RS07050 PF08220 DeoR-like helix-turn-helix domain F542_RS07055 PF13419 Haloacid dehalogenase-like hydrolase F542_RS07060 PF06923 Glucitol operon activator protein (GutM) F542_RS07065 PF00106 short chain dehydrogenase F542_RS07070 PF03829 PTS system glucitol/sorbitol-specific IIA component F542_RS07075 PF07663 Sorbitol phosphotransferase enzyme II C-terminus F542_RS07075 PF03612 Sorbitol phosphotransferase enzyme II N-terminus F542_RS07080 PF03608 PTS system enzyme II sorbitol-specific factor F542_RS07085 PF06508 Queuosine biosynthesis protein QueC F542_RS07090 PF01242 6-pyruvoyl tetrahydropterin synthase F542_RS07095 PF04055 Radical SAM superfamily F542_RS07100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F542_RS07100 PF07992 Pyridine nucleotide-disulphide oxidoreductase F542_RS07105 PF03350 Uncharacterized protein family, UPF0114 F542_RS07110 PF00881 Nitroreductase family F542_RS07115 PF00005 ABC transporter F542_RS07120 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) F542_RS07125 PF01116 Fructose-bisphosphate aldolase class-II F542_RS07130 PF00162 Phosphoglycerate kinase F542_RS07135 PF00939 Sodium:sulfate symporter transmembrane region F542_RS07140 PF04995 Heme exporter protein D (CcmD) F542_RS07145 PF01578 Cytochrome C assembly protein F542_RS07150 PF03379 CcmB protein F542_RS07155 PF00005 ABC transporter F542_RS07160 PF00308 Bacterial dnaA protein F542_RS07165 PF04973 Nicotinamide mononucleotide transporter F542_RS07170 PF09976 Tetratricopeptide repeat-like domain F542_RS07175 PF13393 Histidyl-tRNA synthetase F542_RS07175 PF03129 Anticodon binding domain F542_RS07180 PF04551 GcpE protein F542_RS07185 PF13464 Domain of unknown function (DUF4115) F542_RS07195 PF00303 Thymidylate synthase F542_RS07200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F542_RS07205 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS07210 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS07210 PF12911 N-terminal TM domain of oligopeptide transport permease C F542_RS07215 PF00005 ABC transporter F542_RS07215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F542_RS07220 PF14256 YwiC-like protein F542_RS07225 PF06071 Protein of unknown function (DUF933) F542_RS07225 PF01926 50S ribosome-binding GTPase F542_RS07230 PF01195 Peptidyl-tRNA hydrolase F542_RS07235 PF00535 Glycosyl transferase family 2 F542_RS07240 PF00270 DEAD/DEAH box helicase F542_RS07240 PF00271 Helicase conserved C-terminal domain F542_RS07245 PF00583 Acetyltransferase (GNAT) family F542_RS07260 PF05175 Methyltransferase small domain F542_RS07260 PF08468 Methyltransferase small domain N-terminal F542_RS07265 PF00462 Glutaredoxin F542_RS07270 PF12848 ABC transporter F542_RS07270 PF00005 ABC transporter F542_RS07275 PF03895 YadA-like membrane anchor domain F542_RS07275 PF13018 Extended Signal Peptide of Type V secretion system F542_RS07275 PF05662 Coiled stalk of trimeric autotransporter adhesin F542_RS07275 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin F542_RS07285 PF11739 Dicarboxylate transport F542_RS07295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F542_RS07300 PF00929 Exonuclease F542_RS07305 PF17483 C-lobe handle domain of Tf-binding protein B F542_RS07305 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B F542_RS07305 PF17484 N-Lobe handle Tf-binding protein B F542_RS07310 PF00593 TonB dependent receptor F542_RS07310 PF07715 TonB-dependent Receptor Plug Domain F542_RS07315 PF00005 ABC transporter F542_RS07315 PF08402 TOBE domain F542_RS07320 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS07325 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS07330 PF07499 RuvA, C-terminal domain F542_RS07330 PF01330 RuvA N terminal domain F542_RS07335 PF05491 RuvB C-terminal winged helix domain F542_RS07335 PF05496 Holliday junction DNA helicase RuvB P-loop domain F542_RS07335 PF17864 RuvB AAA lid domain F542_RS07350 PF08032 RNA 2'-O ribose methyltransferase substrate binding F542_RS07350 PF00588 SpoU rRNA Methylase family F542_RS07355 PF00459 Inositol monophosphatase family F542_RS07360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F542_RS07360 PF02780 Transketolase, C-terminal domain F542_RS07360 PF02779 Transketolase, pyrimidine binding domain F542_RS07365 PF02954 Bacterial regulatory protein, Fis family F542_RS07370 PF01207 Dihydrouridine synthase (Dus) F542_RS07375 PF01343 Peptidase family S49 F542_RS07375 PF08496 Peptidase family S49 N-terminal F542_RS07380 PF00581 Rhodanese-like domain F542_RS07385 PF01618 MotA/TolQ/ExbB proton channel family F542_RS07390 PF02472 Biopolymer transport protein ExbD/TolR F542_RS07395 PF03544 Gram-negative bacterial TonB protein C-terminal F542_RS07400 PF04055 Radical SAM superfamily F542_RS07405 PF11230 Protein of unknown function (DUF3029) F542_RS07410 PF01389 OmpA-like transmembrane domain F542_RS07410 PF00691 OmpA family F542_RS07415 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin F542_RS07415 PF03895 YadA-like membrane anchor domain F542_RS07415 PF13018 Extended Signal Peptide of Type V secretion system F542_RS07415 PF05662 Coiled stalk of trimeric autotransporter adhesin F542_RS07425 PF13361 UvrD-like helicase C-terminal domain F542_RS07425 PF00580 UvrD/REP helicase N-terminal domain F542_RS07430 PF00588 SpoU rRNA Methylase family F542_RS07435 PF10672 S-adenosylmethionine-dependent methyltransferase F542_RS07435 PF02926 THUMP domain F542_RS07435 PF01170 Putative RNA methylase family UPF0020 F542_RS07440 PF01118 Semialdehyde dehydrogenase, NAD binding domain F542_RS07445 PF01960 ArgJ family F542_RS07450 PF00696 Amino acid kinase family F542_RS07455 PF00202 Aminotransferase class-III F542_RS07465 PF01522 Polysaccharide deacetylase F542_RS07465 PF14883 Hypothetical glycosyl hydrolase family 13 F542_RS07470 PF00535 Glycosyl transferase family 2 F542_RS07480 PF05675 Protein of unknown function (DUF817) F542_RS07485 PF03819 MazG nucleotide pyrophosphohydrolase domain F542_RS07490 PF01541 GIY-YIG catalytic domain F542_RS07490 PF08459 UvrC Helix-hairpin-helix N-terminal F542_RS07490 PF02151 UvrB/uvrC motif F542_RS07495 PF01066 CDP-alcohol phosphatidyltransferase F542_RS07500 PF01343 Peptidase family S49 F542_RS07505 PF00881 Nitroreductase family F542_RS07510 PF04315 Elongation factor P hydroxylase F542_RS07515 PF02348 Cytidylyltransferase F542_RS07520 PF04333 MlaA lipoprotein F542_RS07525 PF00753 Metallo-beta-lactamase superfamily F542_RS07530 PF05951 Bacterial protein of unknown function (DUF882) F542_RS07535 PF03734 L,D-transpeptidase catalytic domain F542_RS07540 PF00595 PDZ domain F542_RS07540 PF03572 Peptidase family S41 F542_RS07540 PF17804 Tail specific protease N-terminal domain F542_RS07540 PF11818 C-terminal domain of tail specific protease (DUF3340) F542_RS07545 PF04352 ProQ/FINO family F542_RS07550 PF07992 Pyridine nucleotide-disulphide oxidoreductase F542_RS07565 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F542_RS07565 PF00056 lactate/malate dehydrogenase, NAD binding domain F542_RS07570 PF02863 Arginine repressor, C-terminal domain F542_RS07570 PF01316 Arginine repressor, DNA binding domain F542_RS07575 PF08338 Domain of unknown function (DUF1731) F542_RS07575 PF01370 NAD dependent epimerase/dehydratase family F542_RS07580 PF00849 RNA pseudouridylate synthase F542_RS07580 PF01479 S4 domain F542_RS07585 PF13525 Outer membrane lipoprotein F542_RS07590 PF00814 Glycoprotease family F542_RS07595 PF03279 Bacterial lipid A biosynthesis acyltransferase F542_RS07600 PF02508 Rnf-Nqr subunit, membrane protein F542_RS07605 PF04205 FMN-binding domain F542_RS07610 PF03116 NQR2, RnfD, RnfE family F542_RS07615 PF03458 UPF0126 domain F542_RS07620 PF04073 Aminoacyl-tRNA editing domain F542_RS07625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F542_RS07625 PF13375 RnfC Barrel sandwich hybrid domain F542_RS07625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F542_RS07625 PF12838 4Fe-4S dicluster domain F542_RS07625 PF13375 RnfC Barrel sandwich hybrid domain F542_RS07625 PF12838 4Fe-4S dicluster domain F542_RS07630 PF04060 Putative Fe-S cluster F542_RS07635 PF02508 Rnf-Nqr subunit, membrane protein F542_RS07640 PF00708 Acylphosphatase F542_RS07645 PF01032 FecCD transport family F542_RS07650 PF00005 ABC transporter F542_RS07670 PF01361 Tautomerase enzyme F542_RS07675 PF04400 (Na+)-NQR maturation NqrM F542_RS07680 PF02424 ApbE family F542_RS07685 PF01909 Nucleotidyltransferase domain F542_RS07690 PF08780 Nucleotidyltransferase substrate binding protein like F542_RS07695 PF00970 Oxidoreductase FAD-binding domain F542_RS07695 PF00111 2Fe-2S iron-sulfur cluster binding domain F542_RS07695 PF00175 Oxidoreductase NAD-binding domain F542_RS07700 PF02508 Rnf-Nqr subunit, membrane protein F542_RS07705 PF02508 Rnf-Nqr subunit, membrane protein F542_RS07710 PF04205 FMN-binding domain F542_RS07715 PF03116 NQR2, RnfD, RnfE family F542_RS07720 PF11973 NQRA C-terminal domain F542_RS07720 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) F542_RS07725 PF01106 NifU-like domain F542_RS07725 PF01521 Iron-sulphur cluster biosynthesis F542_RS07730 PF01207 Dihydrouridine synthase (Dus) F542_RS07735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F542_RS07740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F542_RS07745 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS07750 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS07750 PF12911 N-terminal TM domain of oligopeptide transport permease C F542_RS07755 PF00005 ABC transporter F542_RS07755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F542_RS07765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F542_RS07765 PF00005 ABC transporter F542_RS07770 PF00939 Sodium:sulfate symporter transmembrane region F542_RS07775 PF00425 chorismate binding enzyme F542_RS07780 PF00155 Aminotransferase class I and II F542_RS07785 PF00892 EamA-like transporter family F542_RS07790 PF00892 EamA-like transporter family F542_RS07795 PF18074 Primosomal protein N C-terminal domain F542_RS07795 PF17764 3′ DNA-binding domain (3′BD) F542_RS07795 PF00271 Helicase conserved C-terminal domain F542_RS07795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F542_RS07795 PF00270 DEAD/DEAH box helicase F542_RS07800 PF13416 Bacterial extracellular solute-binding protein F542_RS07810 PF08402 TOBE domain F542_RS07810 PF00005 ABC transporter F542_RS07815 PF05191 Adenylate kinase, active site lid F542_RS07820 PF00593 TonB dependent receptor F542_RS07820 PF07715 TonB-dependent Receptor Plug Domain F542_RS07825 PF01497 Periplasmic binding protein F542_RS07830 PF01032 FecCD transport family F542_RS07835 PF01032 FecCD transport family F542_RS07840 PF00005 ABC transporter F542_RS07845 PF07690 Major Facilitator Superfamily F542_RS07850 PF01370 NAD dependent epimerase/dehydratase family F542_RS07855 PF00849 RNA pseudouridylate synthase F542_RS07860 PF01817 Chorismate mutase type II F542_RS07860 PF00800 Prephenate dehydratase F542_RS07865 PF00535 Glycosyl transferase family 2 F542_RS07870 PF00549 CoA-ligase F542_RS07870 PF02629 CoA binding domain F542_RS07875 PF08442 ATP-grasp domain F542_RS07875 PF00549 CoA-ligase F542_RS07880 PF01432 Peptidase family M3 F542_RS07885 PF00171 Aldehyde dehydrogenase family F542_RS07885 PF00465 Iron-containing alcohol dehydrogenase F542_RS07890 PF04055 Radical SAM superfamily F542_RS07895 PF04055 Radical SAM superfamily F542_RS07900 PF02901 Pyruvate formate lyase-like F542_RS07900 PF01228 Glycine radical F542_RS07905 PF01226 Formate/nitrite transporter F542_RS07910 PF00293 NUDIX domain F542_RS07920 PF00459 Inositol monophosphatase family F542_RS07925 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F542_RS07925 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F542_RS07930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F542_RS07940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F542_RS07940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F542_RS07955 PF04354 ZipA, C-terminal FtsZ-binding domain F542_RS07960 PF01653 NAD-dependent DNA ligase adenylation domain F542_RS07960 PF12826 Helix-hairpin-helix motif F542_RS07960 PF03120 NAD-dependent DNA ligase OB-fold domain F542_RS07960 PF00533 BRCA1 C Terminus (BRCT) domain F542_RS07960 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F542_RS07965 PF10063 Uncharacterized integral membrane protein (DUF2301) F542_RS07970 PF06418 CTP synthase N-terminus F542_RS07970 PF00117 Glutamine amidotransferase class-I F542_RS07980 PF07715 TonB-dependent Receptor Plug Domain F542_RS07980 PF00593 TonB dependent receptor F542_RS07985 PF00206 Lyase F542_RS07985 PF14698 Argininosuccinate lyase C-terminal F542_RS07990 PF00557 Metallopeptidase family M24 F542_RS07995 PF01206 Sulfurtransferase TusA F542_RS08000 PF06877 Regulator of ribonuclease activity B F542_RS08010 PF01926 50S ribosome-binding GTPase F542_RS08020 PF01433 Peptidase family M1 domain F542_RS08020 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F542_RS08020 PF11940 Domain of unknown function (DUF3458) Ig-like fold F542_RS08025 PF01168 Alanine racemase, N-terminal domain F542_RS08035 PF13091 PLD-like domain F542_RS08040 PF08264 Anticodon-binding domain of tRNA F542_RS08040 PF06827 Zinc finger found in FPG and IleRS F542_RS08040 PF00133 tRNA synthetases class I (I, L, M and V) F542_RS08045 PF01687 Riboflavin kinase F542_RS08045 PF06574 FAD synthetase F542_RS08080 PF01136 Peptidase family U32 F542_RS08080 PF16325 Peptidase family U32 C-terminal domain F542_RS08085 PF00005 ABC transporter F542_RS08085 PF06472 ABC transporter transmembrane region 2 F542_RS08090 PF00675 Insulinase (Peptidase family M16) F542_RS08090 PF05193 Peptidase M16 inactive domain F542_RS08095 PF07715 TonB-dependent Receptor Plug Domain F542_RS08110 PF04575 Protein of unknown function (DUF560) F542_RS08115 PF01717 Cobalamin-independent synthase, Catalytic domain F542_RS08115 PF08267 Cobalamin-independent synthase, N-terminal domain F542_RS08120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F542_RS08125 PF00091 Tubulin/FtsZ family, GTPase domain F542_RS08125 PF12327 FtsZ family, C-terminal domain F542_RS08130 PF02491 SHS2 domain inserted in FTSA F542_RS08135 PF08478 POTRA domain, FtsQ-type F542_RS08135 PF03799 Cell division protein FtsQ F542_RS08140 PF07478 D-ala D-ala ligase C-terminus F542_RS08140 PF01820 D-ala D-ala ligase N-terminus F542_RS08145 PF08245 Mur ligase middle domain F542_RS08145 PF01225 Mur ligase family, catalytic domain F542_RS08145 PF02875 Mur ligase family, glutamate ligase domain F542_RS08150 PF04101 Glycosyltransferase family 28 C-terminal domain F542_RS08150 PF03033 Glycosyltransferase family 28 N-terminal domain F542_RS08155 PF01098 Cell cycle protein F542_RS08160 PF08245 Mur ligase middle domain F542_RS08160 PF02875 Mur ligase family, glutamate ligase domain F542_RS08165 PF03747 ADP-ribosylglycohydrolase F542_RS08170 PF01810 LysE type translocator F542_RS08175 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F542_RS08175 PF00953 Glycosyl transferase family 4 F542_RS08180 PF01225 Mur ligase family, catalytic domain F542_RS08180 PF02875 Mur ligase family, glutamate ligase domain F542_RS08180 PF08245 Mur ligase middle domain F542_RS08185 PF08245 Mur ligase middle domain F542_RS08185 PF02875 Mur ligase family, glutamate ligase domain F542_RS08185 PF01225 Mur ligase family, catalytic domain F542_RS08195 PF03717 Penicillin-binding Protein dimerisation domain F542_RS08195 PF00905 Penicillin binding protein transpeptidase domain F542_RS08200 PF04999 Cell division protein FtsL F542_RS08205 PF01795 MraW methylase family F542_RS08210 PF02381 MraZ protein, putative antitoxin-like F542_RS08215 PF07840 FadR C-terminal domain F542_RS08215 PF00392 Bacterial regulatory proteins, gntR family F542_RS08220 PF06450 Bacterial Na+/H+ antiporter B (NhaB) F542_RS08225 PF02600 Disulfide bond formation protein DsbB F542_RS08230 PF09334 tRNA synthetases class I (M) F542_RS08230 PF01588 Putative tRNA binding domain F542_RS08235 PF00334 Nucleoside diphosphate kinase F542_RS08240 PF00381 PTS HPr component phosphorylation site F542_RS08240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F542_RS08245 PF00294 pfkB family carbohydrate kinase F542_RS08250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F542_RS08255 PF01177 Asp/Glu/Hydantoin racemase F542_RS08260 PF00920 Dehydratase family F542_RS08265 PF02535 ZIP Zinc transporter F542_RS08270 PF02446 4-alpha-glucanotransferase F542_RS08275 PF00343 Carbohydrate phosphorylase F542_RS08280 PF00196 Bacterial regulatory proteins, luxR family F542_RS08280 PF17874 MalT-like TPR region F542_RS08285 PF00128 Alpha amylase, catalytic domain F542_RS08290 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS08295 PF14785 Maltose transport system permease protein MalF P2 domain F542_RS08295 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS08300 PF01547 Bacterial extracellular solute-binding protein F542_RS08305 PF00005 ABC transporter F542_RS08305 PF17912 MalK OB fold domain F542_RS08310 PF02264 LamB porin F542_RS08315 PF07148 Maltose operon periplasmic protein precursor (MalM) F542_RS08320 PF02575 YbaB/EbfC DNA-binding family F542_RS08325 PF13662 Toprim domain F542_RS08325 PF02132 RecR protein F542_RS08330 PF00679 Elongation factor G C-terminus F542_RS08330 PF03144 Elongation factor Tu domain 2 F542_RS08330 PF00009 Elongation factor Tu GTP binding domain F542_RS08335 PF00462 Glutaredoxin F542_RS08340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F542_RS08345 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F542_RS08350 PF08245 Mur ligase middle domain F542_RS08350 PF02875 Mur ligase family, glutamate ligase domain F542_RS08350 PF01225 Mur ligase family, catalytic domain F542_RS08355 PF00773 RNB domain F542_RS08355 PF00575 S1 RNA binding domain F542_RS08355 PF08206 Ribonuclease B OB domain F542_RS08355 PF08461 Ribonuclease R winged-helix domain F542_RS08355 PF17876 Cold shock domain F542_RS08360 PF00132 Bacterial transferase hexapeptide (six repeats) F542_RS08360 PF06426 Serine acetyltransferase, N-terminal F542_RS08365 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F542_RS08365 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F542_RS08370 PF02556 Preprotein translocase subunit SecB F542_RS08375 PF00581 Rhodanese-like domain F542_RS08380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F542_RS08380 PF05698 Bacterial trigger factor protein (TF) C-terminus F542_RS08380 PF05697 Bacterial trigger factor protein (TF) F542_RS08385 PF01476 LysM domain F542_RS08390 PF01502 Phosphoribosyl-AMP cyclohydrolase F542_RS08390 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F542_RS08395 PF00977 Histidine biosynthesis protein F542_RS08400 PF00977 Histidine biosynthesis protein F542_RS08405 PF04480 Protein of unknown function (DUF559) F542_RS08415 PF00117 Glutamine amidotransferase class-I F542_RS08425 PF00475 Imidazoleglycerol-phosphate dehydratase F542_RS08435 PF00155 Aminotransferase class I and II F542_RS08450 PF00815 Histidinol dehydrogenase F542_RS08455 PF01634 ATP phosphoribosyltransferase F542_RS08455 PF08029 HisG, C-terminal domain F542_RS08460 PF04055 Radical SAM superfamily F542_RS08465 PF03695 Uncharacterised protein family (UPF0149) F542_RS08470 PF05164 Cell division protein ZapA F542_RS08475 PF01812 5-formyltetrahydrofolate cyclo-ligase family F542_RS08480 PF04191 Phospholipid methyltransferase F542_RS08485 PF01230 HIT domain F542_RS08495 PF00579 tRNA synthetases class I (W and Y) F542_RS08495 PF01479 S4 domain F542_RS08510 PF01435 Peptidase family M48 F542_RS08515 PF00709 Adenylosuccinate synthetase F542_RS08520 PF01145 SPFH domain / Band 7 family F542_RS08525 PF01145 SPFH domain / Band 7 family F542_RS08535 PF04488 Glycosyltransferase sugar-binding region containing DXD motif F542_RS08540 PF03916 Polysulphide reductase, NrfD F542_RS08545 PF13247 4Fe-4S dicluster domain F542_RS08555 PF02335 Cytochrome c552 F542_RS08570 PF05036 Sporulation related domain F542_RS08575 PF00005 ABC transporter F542_RS08580 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS08585 PF02080 TrkA-C domain F542_RS08585 PF02254 TrkA-N domain F542_RS08590 PF01189 16S rRNA methyltransferase RsmB/F F542_RS08590 PF01029 NusB family F542_RS08595 PF00551 Formyl transferase F542_RS08595 PF02911 Formyl transferase, C-terminal domain F542_RS08615 PF01205 Uncharacterized protein family UPF0029 F542_RS08615 PF09186 Domain of unknown function (DUF1949) F542_RS08625 PF00929 Exonuclease F542_RS08630 PF02378 Phosphotransferase system, EIIC F542_RS08630 PF00367 phosphotransferase system, EIIB F542_RS08640 PF08281 Sigma-70, region 4 F542_RS08640 PF04542 Sigma-70 region 2 F542_RS08645 PF09836 Putative DNA-binding domain F542_RS08650 PF05114 Protein of unknown function (DUF692) F542_RS08660 PF07681 DoxX F542_RS08665 PF03605 Anaerobic c4-dicarboxylate membrane transporter F542_RS08670 PF02785 Biotin carboxylase C-terminal domain F542_RS08670 PF00289 Biotin carboxylase, N-terminal domain F542_RS08670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F542_RS08675 PF00364 Biotin-requiring enzyme F542_RS08685 PF01220 Dehydroquinase class II F542_RS08690 PF03960 ArsC family F542_RS08695 PF03471 Transporter associated domain F542_RS08695 PF00571 CBS domain F542_RS08695 PF01595 Cyclin M transmembrane N-terminal domain F542_RS08700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F542_RS08700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F542_RS08705 PF00209 Sodium:neurotransmitter symporter family F542_RS08715 PF00132 Bacterial transferase hexapeptide (six repeats) F542_RS08715 PF14602 Hexapeptide repeat of succinyl-transferase F542_RS08715 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal F542_RS08720 PF02620 Large ribosomal RNA subunit accumulation protein YceD F542_RS08725 PF01783 Ribosomal L32p protein family F542_RS08730 PF02504 Fatty acid synthesis protein F542_RS08735 PF09278 MerR, DNA binding F542_RS08735 PF00376 MerR family regulatory protein F542_RS08740 PF01297 Zinc-uptake complex component A periplasmic F542_RS08750 PF03212 Pertactin F542_RS08750 PF02395 Immunoglobulin A1 protease F542_RS08765 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase F542_RS08775 PF01467 Cytidylyltransferase-like F542_RS08785 PF02563 Polysaccharide biosynthesis/export protein F542_RS08795 PF01061 ABC-2 type transporter F542_RS08800 PF00005 ABC transporter F542_RS08805 PF00291 Pyridoxal-phosphate dependent enzyme F542_RS08810 PF01758 Sodium Bile acid symporter family F542_RS08815 PF00445 Ribonuclease T2 family F542_RS08820 PF10263 SprT-like family F542_RS08820 PF17283 SprT-like zinc ribbon domain F542_RS08825 PF04143 Sulphur transport F542_RS08830 PF01206 Sulfurtransferase TusA F542_RS08835 PF18337 RapA N-terminal Tudor like domain F542_RS08835 PF18339 RapA N-terminal Tudor like domain 1 F542_RS08835 PF12137 RNA polymerase recycling family C-terminal F542_RS08835 PF00271 Helicase conserved C-terminal domain F542_RS08835 PF00176 SNF2 family N-terminal domain F542_RS08840 PF01966 HD domain F542_RS08840 PF13286 Phosphohydrolase-associated domain F542_RS08845 PF01938 TRAM domain F542_RS08845 PF05958 tRNA (Uracil-5-)-methyltransferase F542_RS08855 PF04186 FxsA cytoplasmic membrane protein F542_RS08880 PF04364 DNA polymerase III chi subunit, HolC F542_RS08885 PF13673 Acetyltransferase (GNAT) domain F542_RS08900 PF08264 Anticodon-binding domain of tRNA F542_RS08900 PF00133 tRNA synthetases class I (I, L, M and V) F542_RS08900 PF10458 Valyl tRNA synthetase tRNA binding arm F542_RS08920 PF00575 S1 RNA binding domain F542_RS08920 PF10150 Ribonuclease E/G family F542_RS08920 PF12111 Polyribonucleotide phosphorylase C terminal F542_RS08925 PF00924 Mechanosensitive ion channel F542_RS08925 PF05552 Conserved TM helix F542_RS08930 PF05525 Branched-chain amino acid transport protein F542_RS08940 PF00698 Acyl transferase domain F542_RS08945 PF02677 Epoxyqueuosine reductase QueH F542_RS08950 PF00348 Polyprenyl synthetase F542_RS08955 PF00571 CBS domain F542_RS08955 PF01595 Cyclin M transmembrane N-terminal domain F542_RS08955 PF03471 Transporter associated domain F542_RS08960 PF01578 Cytochrome C assembly protein F542_RS08965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F542_RS08965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F542_RS08965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F542_RS08965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F542_RS08970 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F542_RS08975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F542_RS08975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F542_RS08990 PF00005 ABC transporter F542_RS08990 PF03412 Peptidase C39 family F542_RS08990 PF00664 ABC transporter transmembrane region F542_RS09030 PF00923 Transaldolase/Fructose-6-phosphate aldolase F542_RS09040 PF04546 Sigma-70, non-essential region F542_RS09040 PF03979 Sigma-70 factor, region 1.1 F542_RS09040 PF00140 Sigma-70 factor, region 1.2 F542_RS09040 PF04542 Sigma-70 region 2 F542_RS09040 PF04539 Sigma-70 region 3 F542_RS09040 PF04545 Sigma-70, region 4 F542_RS09045 PF10410 DnaB-helicase binding domain of primase F542_RS09045 PF08278 DNA primase DnaG DnaB-binding F542_RS09045 PF01807 CHC2 zinc finger F542_RS09045 PF08275 DNA primase catalytic core, N-terminal domain F542_RS09050 PF01165 Ribosomal protein S21 F542_RS09055 PF00164 Ribosomal protein S12/S23 F542_RS09060 PF00177 Ribosomal protein S7p/S5e F542_RS09065 PF00009 Elongation factor Tu GTP binding domain F542_RS09065 PF00679 Elongation factor G C-terminus F542_RS09065 PF14492 Elongation Factor G, domain II F542_RS09065 PF03144 Elongation factor Tu domain 2 F542_RS09065 PF03764 Elongation factor G, domain IV F542_RS09070 PF00009 Elongation factor Tu GTP binding domain F542_RS09070 PF03143 Elongation factor Tu C-terminal domain F542_RS09070 PF03144 Elongation factor Tu domain 2 F542_RS09075 PF03144 Elongation factor Tu domain 2 F542_RS09075 PF16658 Class II release factor RF3, C-terminal domain F542_RS09075 PF00009 Elongation factor Tu GTP binding domain F542_RS09080 PF00588 SpoU rRNA Methylase family F542_RS09080 PF08032 RNA 2'-O ribose methyltransferase substrate binding F542_RS09085 PF03150 Di-haem cytochrome c peroxidase F542_RS09090 PF07498 Rho termination factor, N-terminal domain F542_RS09090 PF07497 Rho termination factor, RNA-binding domain F542_RS09090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F542_RS09110 PF01479 S4 domain F542_RS09115 PF01430 Hsp33 protein F542_RS09160 PF03808 Glycosyl transferase WecB/TagA/CpsF family F542_RS09165 PF06899 WzyE protein, O-antigen assembly polymerase F542_RS09175 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 F542_RS09180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F542_RS09185 PF01497 Periplasmic binding protein F542_RS09190 PF01032 FecCD transport family F542_RS09195 PF00005 ABC transporter F542_RS09210 PF07715 TonB-dependent Receptor Plug Domain F542_RS09210 PF00593 TonB dependent receptor F542_RS09215 PF00890 FAD binding domain F542_RS09215 PF02910 Fumarate reductase flavoprotein C-term F542_RS09220 PF13085 2Fe-2S iron-sulfur cluster binding domain F542_RS09220 PF13183 4Fe-4S dicluster domain F542_RS09225 PF02300 Fumarate reductase subunit C F542_RS09230 PF02313 Fumarate reductase subunit D F542_RS09250 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) F542_RS09255 PF01037 Lrp/AsnC ligand binding domain F542_RS09255 PF13404 AsnC-type helix-turn-helix domain F542_RS09260 PF03590 Aspartate-ammonia ligase F542_RS09270 PF00589 Phage integrase family F542_RS09270 PF02899 Phage integrase, N-terminal SAM-like domain F542_RS09280 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family F542_RS09285 PF05746 DALR anticodon binding domain F542_RS09285 PF02092 Glycyl-tRNA synthetase beta subunit F542_RS09290 PF04480 Protein of unknown function (DUF559) F542_RS09300 PF02091 Glycyl-tRNA synthetase alpha subunit F542_RS09305 PF02632 BioY family F542_RS09315 PF08007 Cupin superfamily protein F542_RS09320 PF07509 Protein of unknown function (DUF1523) F542_RS09325 PF01026 TatD related DNase F542_RS09330 PF00152 tRNA synthetases class II (D, K and N) F542_RS09335 PF02386 Cation transport protein F542_RS09345 PF05662 Coiled stalk of trimeric autotransporter adhesin F542_RS09345 PF03895 YadA-like membrane anchor domain F542_RS09345 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin F542_RS09345 PF13018 Extended Signal Peptide of Type V secretion system F542_RS09375 PF02769 AIR synthase related protein, C-terminal domain F542_RS09375 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F542_RS09375 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal F542_RS09380 PF02080 TrkA-C domain F542_RS09380 PF03600 Citrate transporter F542_RS09385 PF00034 Cytochrome c F542_RS09385 PF14376 Haem-binding domain F542_RS09385 PF03150 Di-haem cytochrome c peroxidase F542_RS09390 PF02557 D-alanyl-D-alanine carboxypeptidase F542_RS09395 PF04445 Putative SAM-dependent methyltransferase F542_RS09400 PF01809 Putative membrane protein insertion efficiency factor F542_RS09405 PF00825 Ribonuclease P F542_RS09410 PF00468 Ribosomal protein L34 F542_RS09415 PF00892 EamA-like transporter family F542_RS09420 PF06965 Na+/H+ antiporter 1 F542_RS09425 PF00550 Phosphopantetheine attachment site F542_RS09440 PF13556 PucR C-terminal helix-turn-helix domain F542_RS09440 PF17853 GGDEF-like domain F542_RS09440 PF05651 Putative sugar diacid recognition F542_RS09445 PF02447 GntP family permease F542_RS09450 PF02595 Glycerate kinase family F542_RS09455 PF03129 Anticodon binding domain F542_RS09455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F542_RS09455 PF04073 Aminoacyl-tRNA editing domain F542_RS09460 PF00149 Calcineurin-like phosphoesterase F542_RS09460 PF02872 5'-nucleotidase, C-terminal domain F542_RS09465 PF00258 Flavodoxin F542_RS09470 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) F542_RS09475 PF00140 Sigma-70 factor, region 1.2 F542_RS09475 PF04542 Sigma-70 region 2 F542_RS09475 PF04545 Sigma-70, region 4 F542_RS09480 PF01323 DSBA-like thioredoxin domain F542_RS09485 PF06288 Protein of unknown function (DUF1040) F542_RS09490 PF12804 MobA-like NTP transferase domain F542_RS09495 PF05068 Mannitol repressor F542_RS09500 PF08125 Mannitol dehydrogenase C-terminal domain F542_RS09500 PF01232 Mannitol dehydrogenase Rossmann domain F542_RS09505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F542_RS09505 PF02378 Phosphotransferase system, EIIC F542_RS09505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F542_RS09510 PF04219 Protein of unknown function, DUF F542_RS09515 PF05958 tRNA (Uracil-5-)-methyltransferase F542_RS09530 PF00171 Aldehyde dehydrogenase family F542_RS09535 PF03631 Virulence factor BrkB F542_RS09540 PF02580 D-Tyr-tRNA(Tyr) deacylase F542_RS09545 PF09179 TilS substrate binding domain F542_RS09545 PF01171 PP-loop family F542_RS09545 PF11734 TilS substrate C-terminal domain F542_RS09550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F542_RS09560 PF01649 Ribosomal protein S20 F542_RS09565 PF03023 Lipid II flippase MurJ F542_RS09570 PF01226 Formate/nitrite transporter F542_RS09575 PF00009 Elongation factor Tu GTP binding domain F542_RS09575 PF03144 Elongation factor Tu domain 2 F542_RS09575 PF03143 Elongation factor Tu C-terminal domain F542_RS09600 PF00485 Phosphoribulokinase / Uridine kinase family F542_RS09605 PF05175 Methyltransferase small domain F542_RS09610 PF09115 DNA polymerase III, delta subunit, C terminal F542_RS09620 PF02223 Thymidylate kinase F542_RS09625 PF02618 YceG-like family F542_RS09630 PF00082 Subtilase family F542_RS09630 PF03797 Autotransporter beta-domain F542_RS09635 PF06827 Zinc finger found in FPG and IleRS F542_RS09635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F542_RS09635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F542_RS09640 PF05159 Capsule polysaccharide biosynthesis protein F542_RS09645 PF05159 Capsule polysaccharide biosynthesis protein F542_RS09650 PF01138 3' exoribonuclease family, domain 1 F542_RS09650 PF03725 3' exoribonuclease family, domain 2 F542_RS09655 PF03755 YicC-like family, N-terminal region F542_RS09655 PF08340 Domain of unknown function (DUF1732) F542_RS09660 PF01385 Probable transposase F542_RS09660 PF07282 Putative transposase DNA-binding domain F542_RS09660 PF12323 Helix-turn-helix domain F542_RS09665 PF02237 Biotin protein ligase C terminal domain F542_RS09665 PF08279 HTH domain F542_RS09665 PF03099 Biotin/lipoate A/B protein ligase family F542_RS09670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F542_RS09670 PF01565 FAD binding domain F542_RS09675 PF03466 LysR substrate binding domain F542_RS09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS09680 PF00440 Bacterial regulatory proteins, tetR family F542_RS09685 PF00578 AhpC/TSA family F542_RS09690 PF03099 Biotin/lipoate A/B protein ligase family F542_RS09690 PF10437 Bacterial lipoate protein ligase C-terminus F542_RS09695 PF00135 Carboxylesterase family F542_RS09705 PF12146 Serine aminopeptidase, S33 F542_RS09710 PF12697 Alpha/beta hydrolase family F542_RS09715 PF00248 Aldo/keto reductase family F542_RS09730 PF03466 LysR substrate binding domain F542_RS09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS09735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F542_RS09735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F542_RS09740 PF08240 Alcohol dehydrogenase GroES-like domain F542_RS09740 PF00107 Zinc-binding dehydrogenase F542_RS09745 PF00881 Nitroreductase family F542_RS09750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F542_RS09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS09755 PF03466 LysR substrate binding domain F542_RS09760 PF00892 EamA-like transporter family F542_RS09765 PF04993 TfoX N-terminal domain F542_RS09765 PF04994 TfoX C-terminal domain F542_RS09805 PF03605 Anaerobic c4-dicarboxylate membrane transporter F542_RS09810 PF01177 Asp/Glu/Hydantoin racemase F542_RS09815 PF03466 LysR substrate binding domain F542_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS09820 PF00675 Insulinase (Peptidase family M16) F542_RS09820 PF05193 Peptidase M16 inactive domain F542_RS09820 PF16187 Middle or third domain of peptidase_M16 F542_RS09825 PF17946 RecC C-terminal domain F542_RS09850 PF07977 FabA-like domain F542_RS09855 PF05362 Lon protease (S16) C-terminal proteolytic domain F542_RS09855 PF13654 AAA domain F542_RS09860 PF17414 MatP C-terminal ribbon-helix-helix domain F542_RS09860 PF06303 MatP N-terminal domain F542_RS09865 PF00691 OmpA family F542_RS09865 PF01389 OmpA-like transmembrane domain F542_RS09870 PF01389 OmpA-like transmembrane domain F542_RS09870 PF00691 OmpA family F542_RS09875 PF13183 4Fe-4S dicluster domain F542_RS09875 PF02913 FAD linked oxidases, C-terminal domain F542_RS09875 PF01565 FAD binding domain F542_RS09885 PF01926 50S ribosome-binding GTPase F542_RS09885 PF13167 GTP-binding GTPase N-terminal F542_RS09885 PF16360 GTP-binding GTPase Middle Region F542_RS09890 PF17209 Hfq protein F542_RS09910 PF07715 TonB-dependent Receptor Plug Domain F542_RS09910 PF04886 PT repeat F542_RS09910 PF00593 TonB dependent receptor F542_RS09915 PF06228 Haem utilisation ChuX/HutX F542_RS09920 PF01243 Pyridoxamine 5'-phosphate oxidase F542_RS09925 PF01494 FAD binding domain F542_RS09930 PF01078 Magnesium chelatase, subunit ChlI F542_RS09930 PF13335 Magnesium chelatase, subunit ChlI C-terminal F542_RS09935 PF00012 Hsp70 protein F542_RS09945 PF00684 DnaJ central domain F542_RS09945 PF01556 DnaJ C terminal domain F542_RS09945 PF00226 DnaJ domain F542_RS09950 PF00072 Response regulator receiver domain F542_RS09950 PF00486 Transcriptional regulatory protein, C terminal F542_RS09955 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region F542_RS09955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F542_RS09960 PF02152 Dihydroneopterin aldolase F542_RS09965 PF02660 Glycerol-3-phosphate acyltransferase F542_RS09975 PF00282 Pyridoxal-dependent decarboxylase conserved domain F542_RS09985 PF00202 Aminotransferase class-III F542_RS09990 PF03061 Thioesterase superfamily F542_RS09995 PF03937 Flavinator of succinate dehydrogenase F542_RS10000 PF02401 LytB protein F542_RS10005 PF01252 Signal peptidase (SPase) II F542_RS10010 PF00543 Nitrogen regulatory protein P-II F542_RS10020 PF00994 Probable molybdopterin binding domain F542_RS10025 PF04304 Protein of unknown function (DUF454) F542_RS10030 PF00535 Glycosyl transferase family 2 F542_RS10035 PF00149 Calcineurin-like phosphoesterase F542_RS10040 PF06291 Bor protein F542_RS10045 PF06291 Bor protein F542_RS10050 PF00579 tRNA synthetases class I (W and Y) F542_RS10060 PF10011 Predicted membrane protein (DUF2254) F542_RS10065 PF01202 Shikimate kinase F542_RS10070 PF02447 GntP family permease F542_RS10085 PF03613 PTS system mannose/fructose/sorbose family IID component F542_RS10090 PF03609 PTS system sorbose-specific iic component F542_RS10095 PF03610 PTS system fructose IIA component F542_RS10095 PF03830 PTS system sorbose subfamily IIB component F542_RS10100 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F542_RS10105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F542_RS10110 PF03611 PTS system sugar-specific permease component F542_RS10120 PF00455 DeoR C terminal sensor domain F542_RS10120 PF08220 DeoR-like helix-turn-helix domain F542_RS10125 PF01261 Xylose isomerase-like TIM barrel F542_RS10130 PF00596 Class II Aldolase and Adducin N-terminal domain F542_RS10135 PF03797 Autotransporter beta-domain F542_RS10135 PF00082 Subtilase family F542_RS10135 PF12951 Passenger-associated-transport-repeat F542_RS10140 PF01370 NAD dependent epimerase/dehydratase family F542_RS10145 PF01678 Diaminopimelate epimerase F542_RS10150 PF03605 Anaerobic c4-dicarboxylate membrane transporter F542_RS10160 PF05192 MutS domain III F542_RS10160 PF01624 MutS domain I F542_RS10160 PF00488 MutS domain V F542_RS10160 PF05190 MutS family domain IV F542_RS10160 PF05188 MutS domain II F542_RS10165 PF09106 Elongation factor SelB, winged helix F542_RS10165 PF00009 Elongation factor Tu GTP binding domain F542_RS10165 PF09107 Elongation factor SelB, winged helix F542_RS10165 PF03144 Elongation factor Tu domain 2 F542_RS10170 PF04077 DsrH like protein F542_RS10175 PF02635 DsrE/DsrF-like family F542_RS10180 PF02635 DsrE/DsrF-like family F542_RS10185 PF08348 YheO-like PAS domain F542_RS10185 PF13309 HTH domain F542_RS10190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F542_RS10190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F542_RS10195 PF04102 SlyX F542_RS10200 PF04076 Bacterial OB fold (BOF) protein F542_RS10205 PF04262 Glutamate-cysteine ligase F542_RS10205 PF18419 ATP-grasp-like domain F542_RS10205 PF02655 ATP-grasp domain F542_RS10215 PF01047 MarR family F542_RS10225 PF01638 HxlR-like helix-turn-helix F542_RS10230 PF02525 Flavodoxin-like fold F542_RS10255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS10255 PF03466 LysR substrate binding domain F542_RS10260 PF02129 X-Pro dipeptidyl-peptidase (S15 family) F542_RS10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS10270 PF03466 LysR substrate binding domain F542_RS10280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS10280 PF03466 LysR substrate binding domain F542_RS10300 PF07690 Major Facilitator Superfamily F542_RS10305 PF07681 DoxX F542_RS10310 PF03466 LysR substrate binding domain F542_RS10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS10315 PF14765 Polyketide synthase dehydratase F542_RS10315 PF00550 Phosphopantetheine attachment site F542_RS10315 PF16197 Ketoacyl-synthetase C-terminal extension F542_RS10315 PF00698 Acyl transferase domain F542_RS10315 PF08240 Alcohol dehydrogenase GroES-like domain F542_RS10315 PF00107 Zinc-binding dehydrogenase F542_RS10315 PF08659 KR domain F542_RS10315 PF02801 Beta-ketoacyl synthase, C-terminal domain F542_RS10315 PF00109 Beta-ketoacyl synthase, N-terminal domain F542_RS10355 PF00296 Luciferase-like monooxygenase F542_RS10365 PF00893 Small Multidrug Resistance protein F542_RS10375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F542_RS10375 PF07992 Pyridine nucleotide-disulphide oxidoreductase F542_RS10380 PF00210 Ferritin-like domain F542_RS10385 PF03328 HpcH/HpaI aldolase/citrate lyase family F542_RS10390 PF02525 Flavodoxin-like fold F542_RS10395 PF00296 Luciferase-like monooxygenase F542_RS10400 PF02566 OsmC-like protein F542_RS10410 PF00027 Cyclic nucleotide-binding domain F542_RS10410 PF01734 Patatin-like phospholipase F542_RS10435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F542_RS10435 PF00367 phosphotransferase system, EIIB F542_RS10435 PF02378 Phosphotransferase system, EIIC F542_RS10440 PF00294 pfkB family carbohydrate kinase F542_RS10445 PF13407 Periplasmic binding protein domain F542_RS10450 PF02653 Branched-chain amino acid transport system / permease component F542_RS10455 PF00893 Small Multidrug Resistance protein F542_RS10460 PF00005 ABC transporter F542_RS10465 PF05025 RbsD / FucU transport protein family F542_RS10470 PF00356 Bacterial regulatory proteins, lacI family F542_RS10475 PF01070 FMN-dependent dehydrogenase F542_RS10480 PF00474 Sodium:solute symporter family F542_RS10485 PF14850 DNA-binding domain of Proline dehydrogenase F542_RS10485 PF01619 Proline dehydrogenase F542_RS10485 PF00171 Aldehyde dehydrogenase family F542_RS10485 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F542_RS10495 PF12706 Beta-lactamase superfamily domain F542_RS10500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F542_RS10505 PF02661 Fic/DOC family F542_RS10515 PF03466 LysR substrate binding domain F542_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS10520 PF03060 Nitronate monooxygenase F542_RS10535 PF00296 Luciferase-like monooxygenase F542_RS10545 PF03466 LysR substrate binding domain F542_RS10545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS10555 PF12833 Helix-turn-helix domain F542_RS10555 PF02311 AraC-like ligand binding domain F542_RS10560 PF00085 Thioredoxin F542_RS10570 PF02627 Carboxymuconolactone decarboxylase family F542_RS10580 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F542_RS10580 PF12833 Helix-turn-helix domain F542_RS10590 PF01323 DSBA-like thioredoxin domain F542_RS10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F542_RS10595 PF03466 LysR substrate binding domain F542_RS10625 PF01734 Patatin-like phospholipase F542_RS10630 PF02308 MgtC family F542_RS10635 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F542_RS10640 PF02874 ATP synthase alpha/beta family, beta-barrel domain F542_RS10640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F542_RS10645 PF00231 ATP synthase F542_RS10650 PF00306 ATP synthase alpha/beta chain, C terminal domain F542_RS10650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F542_RS10650 PF02874 ATP synthase alpha/beta family, beta-barrel domain F542_RS10655 PF00213 ATP synthase delta (OSCP) subunit F542_RS10660 PF00430 ATP synthase B/B' CF(0) F542_RS10665 PF00137 ATP synthase subunit C F542_RS10670 PF00119 ATP synthase A chain F542_RS10680 PF00005 ABC transporter F542_RS10680 PF08402 TOBE domain F542_RS10685 PF00528 Binding-protein-dependent transport system inner membrane component F542_RS10690 PF08402 TOBE domain F542_RS10690 PF00005 ABC transporter F542_RS10700 PF00072 Response regulator receiver domain F542_RS10700 PF02954 Bacterial regulatory protein, Fis family F542_RS10700 PF14532 Sigma-54 interaction domain F542_RS10705 PF02527 rRNA small subunit methyltransferase G F542_RS10710 PF02661 Fic/DOC family F542_RS10715 PF01134 Glucose inhibited division protein A F542_RS10715 PF13932 GidA associated domain F542_RS10730 PF13018 Extended Signal Peptide of Type V secretion system F542_RS10730 PF03797 Autotransporter beta-domain F542_RS10730 PF03212 Pertactin F542_RS10730 PF16168 Adhesin of bacterial autotransporter system, probable stalk F542_RS10740 PF13018 Extended Signal Peptide of Type V secretion system F542_RS10740 PF13332 Hemagglutinin repeat F542_RS10740 PF05860 haemagglutination activity domain F542_RS10740 PF04829 Pre-toxin domain with VENN motif F542_RS10745 PF13018 Extended Signal Peptide of Type V secretion system F542_RS10745 PF05594 Haemagluttinin repeat F542_RS10745 PF13332 Hemagglutinin repeat F542_RS10745 PF05860 haemagglutination activity domain F542_RS10745 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain F542_RS10775 PF13018 Extended Signal Peptide of Type V secretion system F542_RS10775 PF13332 Hemagglutinin repeat F542_RS10775 PF05860 haemagglutination activity domain F542_RS10775 PF04829 Pre-toxin domain with VENN motif