F543_RS00035	SM00936	Penicillin-binding protein 5, C-terminal domain 
F543_RS00050	SM00729	Elongator protein 3, MiaB family, Radical SAM
F543_RS00055	SM00382	ATPases associated with a variety of cellular activities
F543_RS00055	SM00962	SRP54-type protein, GTPase domain
F543_RS00055	SM00963	SRP54-type protein, helical bundle domain
F543_RS00105	SM00382	ATPases associated with a variety of cellular activities
F543_RS00150	SM00346	helix_turn_helix isocitrate lyase regulation
F543_RS00175	SM00478	endonuclease III
F543_RS00175	SM00525	F543_RS00175
F543_RS00200	SM00382	ATPases associated with a variety of cellular activities
F543_RS00200	SM01086	C-terminal, D2-small domain, of ClpB protein
F543_RS00215	SM00729	Elongator protein 3, MiaB family, Radical SAM
F543_RS00240	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
F543_RS00240	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
F543_RS00245	SM00649	Ribosomal protein L11/L12
F543_RS00270	SM00663	RNA polymerase I subunit A N-terminus
F543_RS00300	SM00825	Beta-ketoacyl synthase
F543_RS00310	SM00822	F543_RS00310
F543_RS00315	SM00825	Beta-ketoacyl synthase
F543_RS00330	SM00563	Phosphate acyltransferases
F543_RS00410	SM00387	Histidine kinase-like ATPases
F543_RS00420	SM00387	Histidine kinase-like ATPases
F543_RS00420	SM00388	His Kinase A (phosphoacceptor) domain
F543_RS00425	SM00448	cheY-homologous receiver domain
F543_RS00425	SM00862	Transcriptional regulatory protein, C terminal
F543_RS00460	SM00354	helix_turn _helix lactose operon repressor
F543_RS00490	SM00100	Cyclic nucleotide-monophosphate binding domain
F543_RS00490	SM00419	helix_turn_helix, cAMP Regulatory protein
F543_RS00565	SM00487	DEAD-like helicases superfamily
F543_RS00590	SM00342	helix_turn_helix, arabinose operon control protein
F543_RS00635	SM00563	Phosphate acyltransferases
F543_RS00675	SM00382	ATPases associated with a variety of cellular activities
F543_RS00750	SM01409	F543_RS00750
F543_RS00755	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
F543_RS00755	SM00954	Region found in RelA / SpoT proteins
F543_RS00770	SM00487	DEAD-like helicases superfamily
F543_RS00770	SM00490	helicase superfamily c-terminal domain
F543_RS00775	SM01403	F543_RS00775
F543_RS00795	SM01382	F543_RS00795
F543_RS00795	SM01383	F543_RS00795
F543_RS00810	SM00322	K homology RNA-binding domain
F543_RS00830	SM00382	ATPases associated with a variety of cellular activities
F543_RS00830	SM00760	Bacterial dnaA protein helix-turn-helix domain
F543_RS00845	SM00487	DEAD-like helicases superfamily
F543_RS00845	SM00490	helicase superfamily c-terminal domain
F543_RS00845	SM00982	F543_RS00845
F543_RS00845	SM01058	CarD-like/TRCF domain
F543_RS00935	SM00530	Helix-turn-helix XRE-family like proteins 
F543_RS01010	SM01040	BRO family, N-terminal domain
F543_RS01115	SM00232	JAB/MPN domain
F543_RS01170	SM00974	F543_RS01170
F543_RS01175	SM00901	F543_RS01175
F543_RS01195	SM01230	F543_RS01195
F543_RS01205	SM00853	MutL C terminal dimerisation domain
F543_RS01205	SM01340	F543_RS01205
F543_RS01225	SM01004	Delta-aminolevulinic acid dehydratase
F543_RS01280	SM00257	Lysin motif
F543_RS01285	SM00257	Lysin motif
F543_RS01405	SM00836	DALR anticodon binding domain
F543_RS01405	SM01016	Arginyl tRNA synthetase N terminal dom
F543_RS01410	SM01374	F543_RS01410
F543_RS01415	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
F543_RS01480	SM00363	S4 RNA-binding domain
F543_RS01480	SM01390	F543_RS01480
F543_RS01485	SM00662	RNA polymerases D
F543_RS01515	SM00530	Helix-turn-helix XRE-family like proteins 
F543_RS01530	SM00870	F543_RS01530
F543_RS01595	SM00984	UDP binding domain
F543_RS01645	SM00382	ATPases associated with a variety of cellular activities
F543_RS01645	SM00962	SRP54-type protein, GTPase domain
F543_RS01645	SM00963	SRP54-type protein, helical bundle domain
F543_RS01650	SM00382	ATPases associated with a variety of cellular activities
F543_RS01675	SM00382	ATPases associated with a variety of cellular activities
F543_RS01720	SM00382	ATPases associated with a variety of cellular activities
F543_RS01745	SM00420	helix_turn_helix, Deoxyribose operon repressor
F543_RS01745	SM01134	F543_RS01745
F543_RS01755	SM00062	Bacterial periplasmic substrate-binding proteins
F543_RS01775	SM00851	MGS-like domain
F543_RS01775	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
F543_RS01780	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
F543_RS01790	SM00729	Elongator protein 3, MiaB family, Radical SAM
F543_RS01810	SM00859	Semialdehyde dehydrogenase, NAD binding domain
F543_RS01845	SM00363	S4 RNA-binding domain
F543_RS01855	SM00640	Glycosyl hydrolases family 32
F543_RS01860	SM00354	helix_turn _helix lactose operon repressor
F543_RS01905	SM00382	ATPases associated with a variety of cellular activities
F543_RS01935	SM00825	Beta-ketoacyl synthase
F543_RS01985	SM01152	F543_RS01985
F543_RS02020	SM01133	F543_RS02020
F543_RS02095	SM01061	CAT RNA binding domain
F543_RS02115	SM00062	Bacterial periplasmic substrate-binding proteins
F543_RS02120	SM00382	ATPases associated with a variety of cellular activities
F543_RS02175	SM00903	Flavin reductase like domain
F543_RS02210	SM00316	Ribosomal protein S1-like RNA-binding domain
F543_RS02250	SM00729	Elongator protein 3, MiaB family, Radical SAM
F543_RS02250	SM00876	Biotin and Thiamin Synthesis associated domain
F543_RS02255	SM00363	S4 RNA-binding domain
F543_RS02265	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F543_RS02275	SM00450	Rhodanese Homology Domain
F543_RS02340	SM01387	F543_RS02340
F543_RS02350	SM00986	Uracil DNA glycosylase superfamily
F543_RS02350	SM00987	UreE urease accessory protein, C-terminal domain 
F543_RS02365	SM00028	Tetratricopeptide repeats
F543_RS02385	SM00382	ATPases associated with a variety of cellular activities
F543_RS02385	SM00994	ClpX C4-type zinc finger
F543_RS02385	SM01086	C-terminal, D2-small domain, of ClpB protein
F543_RS02425	SM00642	Alpha-amylase domain
F543_RS02550	SM00860	SMI1 / KNR4 family
F543_RS02565	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F543_RS02580	SM01240	F543_RS02580
F543_RS02630	SM01022	F543_RS02630
F543_RS02640	SM00382	ATPases associated with a variety of cellular activities
F543_RS02670	SM00116	Domain in cystathionine beta-synthase and other proteins.
F543_RS02685	SM00342	helix_turn_helix, arabinose operon control protein
F543_RS02915	SM00644	F543_RS02915
F543_RS02915	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
F543_RS03035	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
F543_RS03105	SM00749	bacterial OsmY and nodulation domain
F543_RS03110	SM00382	ATPases associated with a variety of cellular activities
F543_RS03170	SM00387	Histidine kinase-like ATPases
F543_RS03170	SM00433	TopoisomeraseII
F543_RS03195	SM00530	Helix-turn-helix XRE-family like proteins 
F543_RS03200	SM00382	ATPases associated with a variety of cellular activities
F543_RS03225	SM00382	ATPases associated with a variety of cellular activities
F543_RS03245	SM00644	F543_RS03245
F543_RS03285	SM00530	Helix-turn-helix XRE-family like proteins 
F543_RS03295	SM00530	Helix-turn-helix XRE-family like proteins 
F543_RS03325	SM01018	B12 binding domain
F543_RS03345	SM00411	bacterial (prokaryotic) histone like domain
F543_RS03350	SM00937	F543_RS03350
F543_RS03385	SM00382	ATPases associated with a variety of cellular activities
F543_RS03415	SM00518	AP endonuclease family 2
F543_RS03445	SM00917	LeuA allosteric (dimerisation) domain
F543_RS03495	SM00257	Lysin motif
F543_RS03495	SM00646	F543_RS03495
F543_RS03505	SM00479	F543_RS03505
F543_RS03525	SM00481	DNA polymerase alpha chain like domain
F543_RS03555	SM00796	Allophanate hydrolase subunit 1
F543_RS03560	SM00797	Allophanate hydrolase subunit 2
F543_RS03615	SM00382	ATPases associated with a variety of cellular activities
F543_RS03620	SM00062	Bacterial periplasmic substrate-binding proteins
F543_RS03620	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
F543_RS03640	SM00342	helix_turn_helix, arabinose operon control protein
F543_RS03695	SM00460	Transglutaminase/protease-like homologues
F543_RS03715	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
F543_RS03745	SM00382	ATPases associated with a variety of cellular activities
F543_RS03770	SM01323	F543_RS03770
F543_RS03835	SM00382	ATPases associated with a variety of cellular activities
F543_RS03885	SM00855	Phosphoglycerate mutase family
F543_RS03925	SM00861	Transketolase, pyrimidine binding domain
F543_RS03930	SM00732	Likely ribonuclease with RNase H fold.
F543_RS03975	SM00957	SecA DEAD-like domain
F543_RS03975	SM00958	SecA preprotein cross-linking domain
F543_RS04030	SM00382	ATPases associated with a variety of cellular activities
F543_RS04035	SM00563	Phosphate acyltransferases
F543_RS04045	SM01219	F543_RS04045
F543_RS04050	SM00341	Helicase and RNase D C-terminal
F543_RS04050	SM00487	DEAD-like helicases superfamily
F543_RS04050	SM00490	helicase superfamily c-terminal domain
F543_RS04050	SM00956	F543_RS04050
F543_RS04065	SM01192	F543_RS04065
F543_RS04065	SM01193	F543_RS04065
F543_RS04070	SM00382	ATPases associated with a variety of cellular activities
F543_RS04080	SM00316	Ribosomal protein S1-like RNA-binding domain
F543_RS04080	SM00732	Likely ribonuclease with RNase H fold.
F543_RS04085	SM00387	Histidine kinase-like ATPases
F543_RS04150	SM00382	ATPases associated with a variety of cellular activities
F543_RS04150	SM00930	F543_RS04150
F543_RS04170	SM01103	F543_RS04170
F543_RS04175	SM00014	Acid phosphatase homologues
F543_RS04185	SM00849	Metallo-beta-lactamase superfamily
F543_RS04200	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F543_RS04235	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
F543_RS04235	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
F543_RS04255	SM00382	ATPases associated with a variety of cellular activities
F543_RS04275	SM00382	ATPases associated with a variety of cellular activities
F543_RS04280	SM00434	DNA Topoisomerase IV
F543_RS04305	SM00830	Chorismate mutase type II
F543_RS04340	SM00729	Elongator protein 3, MiaB family, Radical SAM
F543_RS04400	SM00650	Ribosomal RNA adenine dimethylases
F543_RS04450	SM00382	ATPases associated with a variety of cellular activities
F543_RS04505	SM00382	ATPases associated with a variety of cellular activities
F543_RS04525	SM00354	helix_turn _helix lactose operon repressor
F543_RS04550	SM00937	F543_RS04550
F543_RS04565	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
F543_RS04600	SM00116	Domain in cystathionine beta-synthase and other proteins.
F543_RS04600	SM01091	Transporter associated domain
F543_RS04705	SM00271	DnaJ molecular chaperone homology domain
F543_RS04740	SM00841	Elongation factor P, C-terminal
F543_RS04740	SM01185	F543_RS04740
F543_RS04765	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
F543_RS04810	SM00463	Small MutS-related domain
F543_RS04820	SM00091	PAS domain
F543_RS04820	SM00387	Histidine kinase-like ATPases
F543_RS04820	SM00388	His Kinase A (phosphoacceptor) domain
F543_RS04820	SM00448	cheY-homologous receiver domain
F543_RS04830	SM00028	Tetratricopeptide repeats
F543_RS04835	SM00487	DEAD-like helicases superfamily
F543_RS04835	SM00490	helicase superfamily c-terminal domain
F543_RS04855	SM00861	Transketolase, pyrimidine binding domain
F543_RS04870	SM00729	Elongator protein 3, MiaB family, Radical SAM
F543_RS04925	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
F543_RS05005	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F543_RS05005	SM00091	PAS domain
F543_RS05010	SM00764	Citrate lyase ligase C-terminal domain
F543_RS05040	SM01329	F543_RS05040
F543_RS05060	SM00382	ATPases associated with a variety of cellular activities
F543_RS05065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F543_RS05065	SM00387	Histidine kinase-like ATPases
F543_RS05065	SM00388	His Kinase A (phosphoacceptor) domain
F543_RS05070	SM00448	cheY-homologous receiver domain
F543_RS05070	SM00862	Transcriptional regulatory protein, C terminal
F543_RS05135	SM00100	Cyclic nucleotide-monophosphate binding domain
F543_RS05135	SM00419	helix_turn_helix, cAMP Regulatory protein
F543_RS05215	SM00849	Metallo-beta-lactamase superfamily
F543_RS05220	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
F543_RS05220	SM00474	3'-5' exonuclease
F543_RS05220	SM00475	5'-3' exonuclease
F543_RS05220	SM00482	DNA polymerase A domain
F543_RS05235	SM00382	ATPases associated with a variety of cellular activities
F543_RS05265	SM00855	Phosphoglycerate mutase family
F543_RS05295	SM00116	Domain in cystathionine beta-synthase and other proteins.
F543_RS05295	SM01240	F543_RS05295
F543_RS05310	SM00642	Alpha-amylase domain
F543_RS05315	SM00642	Alpha-amylase domain
F543_RS05365	SM00316	Ribosomal protein S1-like RNA-binding domain
F543_RS05365	SM00322	K homology RNA-binding domain
F543_RS05390	SM00382	ATPases associated with a variety of cellular activities
F543_RS05390	SM01086	C-terminal, D2-small domain, of ClpB protein
F543_RS05425	SM00382	ATPases associated with a variety of cellular activities
F543_RS05445	SM00840	F543_RS05445
F543_RS05465	SM00919	Malic enzyme, NAD binding domain
F543_RS05465	SM01274	F543_RS05465
F543_RS05475	SM00912	haemagglutination activity domain
F543_RS05510	SM00487	DEAD-like helicases superfamily
F543_RS05515	SM01321	F543_RS05515
F543_RS05560	SM00382	ATPases associated with a variety of cellular activities
F543_RS05580	SM00382	ATPases associated with a variety of cellular activities
F543_RS05585	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
F543_RS05585	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
F543_RS05585	SM00493	F543_RS05585
F543_RS05605	SM00420	helix_turn_helix, Deoxyribose operon repressor
F543_RS05605	SM01134	F543_RS05605
F543_RS05620	SM00382	ATPases associated with a variety of cellular activities
F543_RS05620	SM00464	Found in ATP-dependent protease La (LON)
F543_RS05640	SM00421	helix_turn_helix, Lux Regulon
F543_RS05665	SM00478	endonuclease III
F543_RS05665	SM00525	F543_RS05665
F543_RS05675	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
F543_RS05760	SM00870	F543_RS05760
F543_RS05785	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
F543_RS05800	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F543_RS05810	SM00316	Ribosomal protein S1-like RNA-binding domain
F543_RS05815	SM00411	bacterial (prokaryotic) histone like domain
F543_RS05825	SM00028	Tetratricopeptide repeats
F543_RS05830	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
F543_RS05850	SM00474	3'-5' exonuclease
F543_RS05900	SM00798	AICARFT/IMPCHase bienzyme
F543_RS05900	SM00851	MGS-like domain
F543_RS05905	SM01209	F543_RS05905
F543_RS05905	SM01210	F543_RS05905
F543_RS05915	SM01001	AIR carboxylase
F543_RS05940	SM01011	Aminopeptidase P, N-terminal domain
F543_RS05980	SM00843	F543_RS05980
F543_RS05985	SM00344	helix_turn_helix ASNC type
F543_RS05995	SM00382	ATPases associated with a variety of cellular activities
F543_RS06010	SM00316	Ribosomal protein S1-like RNA-binding domain
F543_RS06010	SM00357	Cold shock protein domain
F543_RS06010	SM00955	F543_RS06010
F543_RS06065	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
F543_RS06090	SM00342	helix_turn_helix, arabinose operon control protein
F543_RS06145	SM00382	ATPases associated with a variety of cellular activities
F543_RS06185	SM00387	Histidine kinase-like ATPases
F543_RS06185	SM00433	TopoisomeraseII
F543_RS06195	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
F543_RS06215	SM00382	ATPases associated with a variety of cellular activities
F543_RS06220	SM00382	ATPases associated with a variety of cellular activities
F543_RS06305	SM00487	DEAD-like helicases superfamily
F543_RS06305	SM00490	helicase superfamily c-terminal domain
F543_RS06310	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
F543_RS06325	SM01329	F543_RS06325
F543_RS06380	SM01130	F543_RS06380
F543_RS06410	SM00382	ATPases associated with a variety of cellular activities
F543_RS06425	SM00925	MltA specific insert domain
F543_RS06455	SM00434	DNA Topoisomerase IV
F543_RS06470	SM00481	DNA polymerase alpha chain like domain
F543_RS06500	SM01400	F543_RS06500
F543_RS06565	SM00357	Cold shock protein domain
F543_RS06570	SM00947	Carbonic anhydrase
F543_RS06590	SM00411	bacterial (prokaryotic) histone like domain
F543_RS06595	SM00873	B3/4 domain
F543_RS06595	SM00874	tRNA synthetase B5 domain
F543_RS06595	SM00896	Ferredoxin-fold anticodon binding domain
F543_RS06615	SM00287	Bacterial SH3 domain homologues
F543_RS06625	SM00316	Ribosomal protein S1-like RNA-binding domain
F543_RS06660	SM01130	F543_RS06660
F543_RS06735	SM00912	haemagglutination activity domain
F543_RS06750	SM00382	ATPases associated with a variety of cellular activities
F543_RS06755	SM00382	ATPases associated with a variety of cellular activities
F543_RS06775	SM00528	Domain in histone-like proteins of HNS family
F543_RS06785	SM00382	ATPases associated with a variety of cellular activities
F543_RS06795	SM00382	ATPases associated with a variety of cellular activities
F543_RS06840	SM00382	ATPases associated with a variety of cellular activities
F543_RS06875	SM00358	Double-stranded RNA binding motif
F543_RS06875	SM00535	Ribonuclease III family
F543_RS06905	SM00855	Phosphoglycerate mutase family
F543_RS06915	SM00382	ATPases associated with a variety of cellular activities
F543_RS06970	SM00363	S4 RNA-binding domain
F543_RS07055	SM00244	prohibitin homologues
F543_RS07060	SM01005	Alanine racemase, C-terminal domain
F543_RS07070	SM01118	F543_RS07070
F543_RS07105	SM00852	Probable molybdopterin binding domain
F543_RS07115	SM00382	ATPases associated with a variety of cellular activities
F543_RS07140	SM00882	Coenzyme A transferase
F543_RS07145	SM00882	Coenzyme A transferase
F543_RS07155	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
F543_RS07200	SM00271	DnaJ molecular chaperone homology domain
F543_RS07285	SM00927	DNA mismatch repair enzyme MutH
F543_RS07310	SM00883	Chaperonin 10 Kd subunit
F543_RS07320	SM00354	helix_turn _helix lactose operon repressor
F543_RS07435	SM00318	Staphylococcal nuclease homologues
F543_RS07455	SM00981	F543_RS07455
F543_RS07465	SM00072	Guanylate kinase homologues.
F543_RS07565	SM00387	Histidine kinase-like ATPases
F543_RS07565	SM00388	His Kinase A (phosphoacceptor) domain
F543_RS07570	SM00421	helix_turn_helix, Lux Regulon
F543_RS07570	SM00448	cheY-homologous receiver domain
F543_RS07590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F543_RS07605	SM00420	helix_turn_helix, Deoxyribose operon repressor
F543_RS07605	SM01134	F543_RS07605
F543_RS07670	SM00382	ATPases associated with a variety of cellular activities
F543_RS07770	SM00382	ATPases associated with a variety of cellular activities
F543_RS07795	SM00487	DEAD-like helicases superfamily
F543_RS07795	SM00490	helicase superfamily c-terminal domain
F543_RS07825	SM00382	ATPases associated with a variety of cellular activities
F543_RS07835	SM00710	Parallel beta-helix repeats
F543_RS07860	SM00479	F543_RS07860
F543_RS07875	SM00382	ATPases associated with a variety of cellular activities
F543_RS07890	SM00278	Helix-hairpin-helix DNA-binding motif class 1
F543_RS07895	SM00382	ATPases associated with a variety of cellular activities
F543_RS07910	SM00967	RNA 2'-O ribose methyltransferase substrate binding
F543_RS07920	SM00861	Transketolase, pyrimidine binding domain
F543_RS07940	SM00450	Rhodanese Homology Domain
F543_RS07995	SM00981	F543_RS07995
F543_RS08000	SM00859	Semialdehyde dehydrogenase, NAD binding domain
F543_RS08050	SM00278	Helix-hairpin-helix DNA-binding motif class 1
F543_RS08050	SM00465	GIY-YIG type nucleases (URI domain)
F543_RS08085	SM00849	Metallo-beta-lactamase superfamily
F543_RS08100	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F543_RS08100	SM00245	tail specific protease
F543_RS08105	SM00945	ProQ/FINO family
F543_RS08140	SM00363	S4 RNA-binding domain
F543_RS08160	SM00900	F543_RS08160
F543_RS08210	SM00382	ATPases associated with a variety of cellular activities
F543_RS08270	SM00900	F543_RS08270
F543_RS08315	SM00382	ATPases associated with a variety of cellular activities
F543_RS08370	SM00382	ATPases associated with a variety of cellular activities
F543_RS08400	SM00382	ATPases associated with a variety of cellular activities
F543_RS08420	SM00830	Chorismate mutase type II
F543_RS08430	SM00881	CoA binding domain
F543_RS08455	SM00729	Elongator protein 3, MiaB family, Radical SAM
F543_RS08500	SM01350	F543_RS08500
F543_RS08515	SM00771	ZipA, C-terminal domain (FtsZ-binding)
F543_RS08520	SM00278	Helix-hairpin-helix DNA-binding motif class 1
F543_RS08520	SM00292	breast cancer carboxy-terminal domain
F543_RS08520	SM00532	Ligase N family
F543_RS08605	SM00904	Riboflavin kinase
F543_RS08685	SM00864	Tubulin/FtsZ family, GTPase domain
F543_RS08685	SM00865	Tubulin/FtsZ family, C-terminal domain
F543_RS08690	SM00842	Cell division protein FtsA
F543_RS08725	SM01321	F543_RS08725
F543_RS08775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F543_RS08795	SM00562	F543_RS08795
F543_RS08845	SM00642	Alpha-amylase domain
F543_RS08865	SM00382	ATPases associated with a variety of cellular activities
F543_RS08885	SM00493	F543_RS08885
F543_RS08890	SM00838	Elongation factor G C-terminus
F543_RS08935	SM00450	Rhodanese Homology Domain
F543_RS08945	SM00257	Lysin motif
F543_RS08990	SM01321	F543_RS08990
F543_RS09055	SM00363	S4 RNA-binding domain
F543_RS09075	SM00788	Adenylosuccinate synthetase
F543_RS09080	SM00244	prohibitin homologues
F543_RS09085	SM00244	prohibitin homologues
F543_RS09135	SM00382	ATPases associated with a variety of cellular activities
F543_RS09185	SM00479	F543_RS09185
F543_RS09230	SM00878	Biotin carboxylase C-terminal domain
F543_RS09255	SM01091	Transporter associated domain
F543_RS09260	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
F543_RS09260	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
F543_RS09270	SM00244	prohibitin homologues
F543_RS09295	SM00422	helix_turn_helix, mercury resistance
F543_RS09355	SM00028	Tetratricopeptide repeats
F543_RS09390	SM00382	ATPases associated with a variety of cellular activities
F543_RS09410	SM00731	SprT homologues.
F543_RS09425	SM00487	DEAD-like helicases superfamily
F543_RS09425	SM00490	helicase superfamily c-terminal domain
F543_RS09510	SM00316	Ribosomal protein S1-like RNA-binding domain
F543_RS09525	SM00822	F543_RS09525
F543_RS09530	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
F543_RS09545	SM01091	Transporter associated domain
F543_RS09580	SM00382	ATPases associated with a variety of cellular activities
F543_RS09635	SM00400	zinc finger
F543_RS09635	SM00493	F543_RS09635
F543_RS09635	SM00766	DNA primase DnaG DnaB-binding
F543_RS09655	SM00838	Elongation factor G C-terminus
F543_RS09655	SM00889	Elongation factor G, domain IV
F543_RS09670	SM00967	RNA 2'-O ribose methyltransferase substrate binding
F543_RS09680	SM00357	Cold shock protein domain
F543_RS09680	SM00382	ATPases associated with a variety of cellular activities
F543_RS09680	SM00959	Rho termination factor, N-terminal domain
F543_RS09695	SM00363	S4 RNA-binding domain
F543_RS09780	SM00382	ATPases associated with a variety of cellular activities
F543_RS09820	SM00278	Helix-hairpin-helix DNA-binding motif class 1
F543_RS09840	SM00344	helix_turn_helix ASNC type
F543_RS09870	SM00836	DALR anticodon binding domain
F543_RS09900	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
F543_RS09945	SM01321	F543_RS09945
F543_RS09965	SM01211	F543_RS09965
F543_RS09975	SM01235	F543_RS09975
F543_RS09990	SM01234	F543_RS09990
F543_RS10050	SM00854	Bacterial capsule synthesis protein PGA_cap
F543_RS10135	SM00977	TilS substrate C-terminal domain
F543_RS10145	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F543_RS10220	SM00869	Autotransporter beta-domain
F543_RS10225	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
F543_RS10225	SM01232	F543_RS10225
F543_RS10330	SM00829	Enoylreductase
F543_RS10520	SM00382	ATPases associated with a variety of cellular activities
F543_RS10545	SM00271	DnaJ molecular chaperone homology domain
F543_RS10550	SM00448	cheY-homologous receiver domain
F543_RS10550	SM00862	Transcriptional regulatory protein, C terminal
F543_RS10560	SM00905	Dihydroneopterin aldolase
F543_RS10565	SM01207	F543_RS10565
F543_RS10610	SM00938	Nitrogen regulatory protein P-II
F543_RS10620	SM00852	Probable molybdopterin binding domain
F543_RS10700	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
F543_RS10720	SM00420	helix_turn_helix, Deoxyribose operon repressor
F543_RS10720	SM01134	F543_RS10720
F543_RS10730	SM01007	Class II Aldolase and Adducin N-terminal domain
F543_RS10735	SM00869	Autotransporter beta-domain
F543_RS10760	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
F543_RS10760	SM00534	ATPase domain of DNA mismatch repair MUTS family
F543_RS10815	SM00347	helix_turn_helix multiple antibiotic resistance protein
F543_RS10840	SM00563	Phosphate acyltransferases
F543_RS10920	SM00422	helix_turn_helix, mercury resistance
F543_RS10930	SM00422	helix_turn_helix, mercury resistance
F543_RS10950	SM00347	helix_turn_helix multiple antibiotic resistance protein
F543_RS10985	SM00382	ATPases associated with a variety of cellular activities
F543_RS11060	SM00650	Ribosomal RNA adenine dimethylases
F543_RS11150	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F543_RS11245	SM00382	ATPases associated with a variety of cellular activities
F543_RS11255	SM00354	helix_turn _helix lactose operon repressor
F543_RS11340	SM00342	helix_turn_helix, arabinose operon control protein
F543_RS11365	SM00342	helix_turn_helix, arabinose operon control protein
F543_RS11390	SM00903	Flavin reductase like domain
F543_RS11400	SM00849	Metallo-beta-lactamase superfamily
F543_RS11405	SM00849	Metallo-beta-lactamase superfamily
F543_RS11425	SM00382	ATPases associated with a variety of cellular activities
F543_RS11465	SM00382	ATPases associated with a variety of cellular activities
F543_RS11475	SM00382	ATPases associated with a variety of cellular activities
F543_RS11485	SM00448	cheY-homologous receiver domain
F543_RS11500	SM01228	F543_RS11500
F543_RS11520	SM00869	Autotransporter beta-domain
F543_RS11535	SM00912	haemagglutination activity domain
F543_RS11565	SM00935	Outer membrane protein (OmpH-like)
F543_RS11605	SM00912	haemagglutination activity domain
