F544_RS00030 SM01228 F544_RS00030 F544_RS00060 SM00382 ATPases associated with a variety of cellular activities F544_RS00070 SM00382 ATPases associated with a variety of cellular activities F544_RS00110 SM00382 ATPases associated with a variety of cellular activities F544_RS00130 SM00849 Metallo-beta-lactamase superfamily F544_RS00135 SM00849 Metallo-beta-lactamase superfamily F544_RS00145 SM00903 Flavin reductase like domain F544_RS00160 SM00342 helix_turn_helix, arabinose operon control protein F544_RS00185 SM00342 helix_turn_helix, arabinose operon control protein F544_RS00190 SM00849 Metallo-beta-lactamase superfamily F544_RS00270 SM00354 helix_turn _helix lactose operon repressor F544_RS00280 SM00382 ATPases associated with a variety of cellular activities F544_RS00375 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor F544_RS00390 SM00829 Enoylreductase F544_RS00425 SM00849 Metallo-beta-lactamase superfamily F544_RS00480 SM00347 helix_turn_helix multiple antibiotic resistance protein F544_RS00535 SM00533 DNA-binding domain of DNA mismatch repair MUTS family F544_RS00535 SM00534 ATPase domain of DNA mismatch repair MUTS family F544_RS00560 SM00869 Autotransporter beta-domain F544_RS00565 SM01007 Class II Aldolase and Adducin N-terminal domain F544_RS00575 SM00420 helix_turn_helix, Deoxyribose operon repressor F544_RS00575 SM01134 F544_RS00575 F544_RS00595 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family F544_RS00675 SM00852 Probable molybdopterin binding domain F544_RS00685 SM00938 Nitrogen regulatory protein P-II F544_RS00730 SM01207 F544_RS00730 F544_RS00735 SM00905 Dihydroneopterin aldolase F544_RS00745 SM00448 cheY-homologous receiver domain F544_RS00745 SM00862 Transcriptional regulatory protein, C terminal F544_RS00750 SM00271 DnaJ molecular chaperone homology domain F544_RS00770 SM00382 ATPases associated with a variety of cellular activities F544_RS00965 SM00829 Enoylreductase F544_RS01030 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain F544_RS01030 SM01232 F544_RS01030 F544_RS01035 SM00869 Autotransporter beta-domain F544_RS01110 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor F544_RS01125 SM00977 TilS substrate C-terminal domain F544_RS01165 SM00382 ATPases associated with a variety of cellular activities F544_RS01275 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain F544_RS01275 SM00437 Bacterial DNA topoisomerase I DNA-binding domain F544_RS01275 SM00493 F544_RS01275 F544_RS01675 SM00854 Bacterial capsule synthesis protein PGA_cap F544_RS01745 SM01234 F544_RS01745 F544_RS01760 SM01235 F544_RS01760 F544_RS01770 SM01211 F544_RS01770 F544_RS01785 SM01321 F544_RS01785 F544_RS01830 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. F544_RS01890 SM00344 helix_turn_helix ASNC type F544_RS01910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 F544_RS01950 SM00382 ATPases associated with a variety of cellular activities F544_RS02035 SM00363 S4 RNA-binding domain F544_RS02050 SM00357 Cold shock protein domain F544_RS02050 SM00382 ATPases associated with a variety of cellular activities F544_RS02050 SM00959 Rho termination factor, N-terminal domain F544_RS02060 SM00967 RNA 2'-O ribose methyltransferase substrate binding F544_RS02075 SM00838 Elongation factor G C-terminus F544_RS02075 SM00889 Elongation factor G, domain IV F544_RS02095 SM00400 zinc finger F544_RS02095 SM00493 F544_RS02095 F544_RS02095 SM00766 DNA primase DnaG DnaB-binding F544_RS02150 SM00382 ATPases associated with a variety of cellular activities F544_RS02185 SM01091 Transporter associated domain F544_RS02200 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. F544_RS02205 SM00822 F544_RS02205 F544_RS02220 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS02300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. F544_RS02305 SM00487 DEAD-like helicases superfamily F544_RS02305 SM00490 helicase superfamily c-terminal domain F544_RS02320 SM00731 SprT homologues. F544_RS02340 SM00382 ATPases associated with a variety of cellular activities F544_RS02385 SM01321 F544_RS02385 F544_RS02395 SM00869 Autotransporter beta-domain F544_RS02410 SM00422 helix_turn_helix, mercury resistance F544_RS02435 SM00244 prohibitin homologues F544_RS02445 SM01002 Alanine dehydrogenase/PNT, C-terminal domain F544_RS02445 SM01003 Alanine dehydrogenase/PNT, N-terminal domain F544_RS02450 SM01091 Transporter associated domain F544_RS02475 SM00878 Biotin carboxylase C-terminal domain F544_RS02520 SM00479 F544_RS02520 F544_RS02570 SM00382 ATPases associated with a variety of cellular activities F544_RS02620 SM00244 prohibitin homologues F544_RS02625 SM00244 prohibitin homologues F544_RS02630 SM00788 Adenylosuccinate synthetase F544_RS02650 SM00363 S4 RNA-binding domain F544_RS02715 SM01321 F544_RS02715 F544_RS02755 SM00257 Lysin motif F544_RS02765 SM00450 Rhodanese Homology Domain F544_RS02780 SM00971 Serine acetyltransferase, N-terminal F544_RS02785 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS02785 SM00357 Cold shock protein domain F544_RS02785 SM00955 F544_RS02785 F544_RS02815 SM00493 F544_RS02815 F544_RS02835 SM00382 ATPases associated with a variety of cellular activities F544_RS02855 SM00642 Alpha-amylase domain F544_RS02860 SM00421 helix_turn_helix, Lux Regulon F544_RS02910 SM00562 F544_RS02910 F544_RS02930 SM00345 helix_turn_helix gluconate operon transcriptional repressor F544_RS02975 SM00671 Sel1-like repeats. F544_RS03010 SM00842 Cell division protein FtsA F544_RS03015 SM00864 Tubulin/FtsZ family, GTPase domain F544_RS03015 SM00865 Tubulin/FtsZ family, C-terminal domain F544_RS03055 SM00382 ATPases associated with a variety of cellular activities F544_RS03095 SM00904 Riboflavin kinase F544_RS03105 SM00155 Phospholipase D. Active site motifs. F544_RS03180 SM00278 Helix-hairpin-helix DNA-binding motif class 1 F544_RS03180 SM00292 breast cancer carboxy-terminal domain F544_RS03180 SM00532 Ligase N family F544_RS03185 SM00771 ZipA, C-terminal domain (FtsZ-binding) F544_RS03200 SM01350 F544_RS03200 F544_RS03245 SM00729 Elongator protein 3, MiaB family, Radical SAM F544_RS03270 SM00881 CoA binding domain F544_RS03280 SM00830 Chorismate mutase type II F544_RS03300 SM00382 ATPases associated with a variety of cellular activities F544_RS03330 SM00382 ATPases associated with a variety of cellular activities F544_RS03345 SM00487 DEAD-like helicases superfamily F544_RS03345 SM00490 helicase superfamily c-terminal domain F544_RS03375 SM00382 ATPases associated with a variety of cellular activities F544_RS03385 SM00382 ATPases associated with a variety of cellular activities F544_RS03430 SM00900 F544_RS03430 F544_RS03485 SM00382 ATPases associated with a variety of cellular activities F544_RS03530 SM00900 F544_RS03530 F544_RS03555 SM00363 S4 RNA-binding domain F544_RS03590 SM00945 ProQ/FINO family F544_RS03595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. F544_RS03595 SM00245 tail specific protease F544_RS03610 SM00849 Metallo-beta-lactamase superfamily F544_RS03645 SM00278 Helix-hairpin-helix DNA-binding motif class 1 F544_RS03645 SM00465 GIY-YIG type nucleases (URI domain) F544_RS03695 SM00859 Semialdehyde dehydrogenase, NAD binding domain F544_RS03700 SM00981 F544_RS03700 F544_RS03765 SM00450 Rhodanese Homology Domain F544_RS03785 SM00861 Transketolase, pyrimidine binding domain F544_RS03795 SM00967 RNA 2'-O ribose methyltransferase substrate binding F544_RS03810 SM00382 ATPases associated with a variety of cellular activities F544_RS03815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 F544_RS03830 SM00382 ATPases associated with a variety of cellular activities F544_RS03845 SM00479 F544_RS03845 F544_RS03870 SM00710 Parallel beta-helix repeats F544_RS03875 SM00382 ATPases associated with a variety of cellular activities F544_RS03905 SM00487 DEAD-like helicases superfamily F544_RS03905 SM00490 helicase superfamily c-terminal domain F544_RS03930 SM00382 ATPases associated with a variety of cellular activities F544_RS04030 SM00382 ATPases associated with a variety of cellular activities F544_RS04095 SM00420 helix_turn_helix, Deoxyribose operon repressor F544_RS04095 SM01134 F544_RS04095 F544_RS04110 SM00345 helix_turn_helix gluconate operon transcriptional repressor F544_RS04115 SM00487 DEAD-like helicases superfamily F544_RS04125 SM00487 DEAD-like helicases superfamily F544_RS04125 SM00490 helicase superfamily c-terminal domain F544_RS04215 SM00072 Guanylate kinase homologues. F544_RS04225 SM00981 F544_RS04225 F544_RS04245 SM00318 Staphylococcal nuclease homologues F544_RS04300 SM00354 helix_turn _helix lactose operon repressor F544_RS04310 SM00883 Chaperonin 10 Kd subunit F544_RS04335 SM00927 DNA mismatch repair enzyme MutH F544_RS04420 SM00271 DnaJ molecular chaperone homology domain F544_RS04465 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain F544_RS04475 SM00882 Coenzyme A transferase F544_RS04480 SM00882 Coenzyme A transferase F544_RS04520 SM01118 F544_RS04520 F544_RS04555 SM00852 Probable molybdopterin binding domain F544_RS04565 SM00382 ATPases associated with a variety of cellular activities F544_RS04590 SM01005 Alanine racemase, C-terminal domain F544_RS04595 SM00244 prohibitin homologues F544_RS04605 SM00382 ATPases associated with a variety of cellular activities F544_RS04605 SM00487 DEAD-like helicases superfamily F544_RS04605 SM00490 helicase superfamily c-terminal domain F544_RS04605 SM00847 Helicase associated domain (HA2) Add an annotation F544_RS04680 SM00363 S4 RNA-binding domain F544_RS04735 SM00530 Helix-turn-helix XRE-family like proteins F544_RS04750 SM00382 ATPases associated with a variety of cellular activities F544_RS04760 SM00855 Phosphoglycerate mutase family F544_RS04790 SM00358 Double-stranded RNA binding motif F544_RS04790 SM00535 Ribonuclease III family F544_RS04825 SM00382 ATPases associated with a variety of cellular activities F544_RS04870 SM00382 ATPases associated with a variety of cellular activities F544_RS04880 SM00382 ATPases associated with a variety of cellular activities F544_RS04890 SM00528 Domain in histone-like proteins of HNS family F544_RS04910 SM00382 ATPases associated with a variety of cellular activities F544_RS04915 SM00382 ATPases associated with a variety of cellular activities F544_RS04930 SM00912 haemagglutination activity domain F544_RS05000 SM01130 F544_RS05000 F544_RS05035 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS05045 SM00287 Bacterial SH3 domain homologues F544_RS05065 SM00873 B3/4 domain F544_RS05065 SM00874 tRNA synthetase B5 domain F544_RS05065 SM00896 Ferredoxin-fold anticodon binding domain F544_RS05070 SM00411 bacterial (prokaryotic) histone like domain F544_RS05090 SM00947 Carbonic anhydrase F544_RS05095 SM00357 Cold shock protein domain F544_RS05145 SM01400 F544_RS05145 F544_RS05175 SM00481 DNA polymerase alpha chain like domain F544_RS05190 SM00434 DNA Topoisomerase IV F544_RS05220 SM00925 MltA specific insert domain F544_RS05235 SM00382 ATPases associated with a variety of cellular activities F544_RS05265 SM01130 F544_RS05265 F544_RS05315 SM00829 Enoylreductase F544_RS05320 SM01329 F544_RS05320 F544_RS05335 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F544_RS05340 SM00487 DEAD-like helicases superfamily F544_RS05340 SM00490 helicase superfamily c-terminal domain F544_RS05420 SM00382 ATPases associated with a variety of cellular activities F544_RS05425 SM00382 ATPases associated with a variety of cellular activities F544_RS05445 SM00926 Molybdopterin oxidoreductase Fe4S4 domain F544_RS05460 SM00433 TopoisomeraseII F544_RS05495 SM00382 ATPases associated with a variety of cellular activities F544_RS05545 SM00729 Elongator protein 3, MiaB family, Radical SAM F544_RS05550 SM00342 helix_turn_helix, arabinose operon control protein F544_RS05575 SM00926 Molybdopterin oxidoreductase Fe4S4 domain F544_RS05630 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS05630 SM00357 Cold shock protein domain F544_RS05630 SM00955 F544_RS05630 F544_RS05645 SM00382 ATPases associated with a variety of cellular activities F544_RS05655 SM00344 helix_turn_helix ASNC type F544_RS05660 SM00843 F544_RS05660 F544_RS05690 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain F544_RS05690 SM00437 Bacterial DNA topoisomerase I DNA-binding domain F544_RS05690 SM00493 F544_RS05690 F544_RS05695 SM01011 Aminopeptidase P, N-terminal domain F544_RS05715 SM01001 AIR carboxylase F544_RS05725 SM01209 F544_RS05725 F544_RS05725 SM01210 F544_RS05725 F544_RS05730 SM00798 AICARFT/IMPCHase bienzyme F544_RS05730 SM00851 MGS-like domain F544_RS05780 SM00474 3'-5' exonuclease F544_RS05800 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family F544_RS05805 SM00028 Tetratricopeptide repeats F544_RS05815 SM00411 bacterial (prokaryotic) histone like domain F544_RS05820 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS05830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. F544_RS05845 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain F544_RS05870 SM00870 F544_RS05870 F544_RS05955 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase F544_RS05965 SM00478 endonuclease III F544_RS05965 SM00525 F544_RS05965 F544_RS05990 SM00421 helix_turn_helix, Lux Regulon F544_RS06010 SM00382 ATPases associated with a variety of cellular activities F544_RS06010 SM00464 Found in ATP-dependent protease La (LON) F544_RS06025 SM00420 helix_turn_helix, Deoxyribose operon repressor F544_RS06025 SM01134 F544_RS06025 F544_RS06045 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain F544_RS06045 SM00437 Bacterial DNA topoisomerase I DNA-binding domain F544_RS06045 SM00493 F544_RS06045 F544_RS06050 SM00382 ATPases associated with a variety of cellular activities F544_RS06070 SM00382 ATPases associated with a variety of cellular activities F544_RS06165 SM00912 haemagglutination activity domain F544_RS06175 SM00919 Malic enzyme, NAD binding domain F544_RS06175 SM01274 F544_RS06175 F544_RS06195 SM00840 F544_RS06195 F544_RS06215 SM00382 ATPases associated with a variety of cellular activities F544_RS06220 SM00382 ATPases associated with a variety of cellular activities F544_RS06250 SM00382 ATPases associated with a variety of cellular activities F544_RS06250 SM01086 C-terminal, D2-small domain, of ClpB protein F544_RS06275 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS06275 SM00322 K homology RNA-binding domain F544_RS06325 SM00642 Alpha-amylase domain F544_RS06330 SM00642 Alpha-amylase domain F544_RS06345 SM00116 Domain in cystathionine beta-synthase and other proteins. F544_RS06345 SM01240 F544_RS06345 F544_RS06375 SM00855 Phosphoglycerate mutase family F544_RS06395 SM00487 DEAD-like helicases superfamily F544_RS06395 SM00490 helicase superfamily c-terminal domain F544_RS06405 SM00382 ATPases associated with a variety of cellular activities F544_RS06420 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs F544_RS06420 SM00474 3'-5' exonuclease F544_RS06420 SM00475 5'-3' exonuclease F544_RS06420 SM00482 DNA polymerase A domain F544_RS06425 SM00849 Metallo-beta-lactamase superfamily F544_RS06505 SM00100 Cyclic nucleotide-monophosphate binding domain F544_RS06505 SM00419 helix_turn_helix, cAMP Regulatory protein F544_RS06550 SM00448 cheY-homologous receiver domain F544_RS06550 SM00862 Transcriptional regulatory protein, C terminal F544_RS06555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain F544_RS06555 SM00387 Histidine kinase-like ATPases F544_RS06555 SM00388 His Kinase A (phosphoacceptor) domain F544_RS06560 SM00382 ATPases associated with a variety of cellular activities F544_RS06580 SM01329 F544_RS06580 F544_RS06610 SM00764 Citrate lyase ligase C-terminal domain F544_RS06615 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) F544_RS06615 SM00091 PAS domain F544_RS06690 SM00382 ATPases associated with a variety of cellular activities F544_RS06695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. F544_RS06745 SM00729 Elongator protein 3, MiaB family, Radical SAM F544_RS06760 SM00861 Transketolase, pyrimidine binding domain F544_RS06780 SM00382 ATPases associated with a variety of cellular activities F544_RS06800 SM00487 DEAD-like helicases superfamily F544_RS06800 SM00490 helicase superfamily c-terminal domain F544_RS06805 SM00028 Tetratricopeptide repeats F544_RS06810 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS06810 SM00322 K homology RNA-binding domain F544_RS06815 SM00091 PAS domain F544_RS06815 SM00387 Histidine kinase-like ATPases F544_RS06815 SM00388 His Kinase A (phosphoacceptor) domain F544_RS06815 SM00448 cheY-homologous receiver domain F544_RS06825 SM00463 Small MutS-related domain F544_RS06870 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F544_RS06895 SM00841 Elongation factor P, C-terminal F544_RS06895 SM01185 F544_RS06895 F544_RS06930 SM00271 DnaJ molecular chaperone homology domain F544_RS07035 SM00116 Domain in cystathionine beta-synthase and other proteins. F544_RS07035 SM01091 Transporter associated domain F544_RS07060 SM00937 F544_RS07060 F544_RS07085 SM00354 helix_turn _helix lactose operon repressor F544_RS07105 SM00382 ATPases associated with a variety of cellular activities F544_RS07150 SM00954 Region found in RelA / SpoT proteins F544_RS07160 SM00382 ATPases associated with a variety of cellular activities F544_RS07210 SM00650 Ribosomal RNA adenine dimethylases F544_RS07270 SM00729 Elongator protein 3, MiaB family, Radical SAM F544_RS07305 SM00830 Chorismate mutase type II F544_RS07330 SM00434 DNA Topoisomerase IV F544_RS07335 SM00382 ATPases associated with a variety of cellular activities F544_RS07350 SM00487 DEAD-like helicases superfamily F544_RS07350 SM00491 F544_RS07350 F544_RS07355 SM00382 ATPases associated with a variety of cellular activities F544_RS07375 SM01002 Alanine dehydrogenase/PNT, C-terminal domain F544_RS07375 SM01003 Alanine dehydrogenase/PNT, N-terminal domain F544_RS07405 SM00935 Outer membrane protein (OmpH-like) F544_RS07415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. F544_RS07430 SM00849 Metallo-beta-lactamase superfamily F544_RS07440 SM00014 Acid phosphatase homologues F544_RS07445 SM01103 F544_RS07445 F544_RS07465 SM00382 ATPases associated with a variety of cellular activities F544_RS07465 SM00930 F544_RS07465 F544_RS07530 SM00387 Histidine kinase-like ATPases F544_RS07535 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS07535 SM00732 Likely ribonuclease with RNase H fold. F544_RS07545 SM00382 ATPases associated with a variety of cellular activities F544_RS07550 SM01192 F544_RS07550 F544_RS07550 SM01193 F544_RS07550 F544_RS07565 SM00341 Helicase and RNase D C-terminal F544_RS07565 SM00487 DEAD-like helicases superfamily F544_RS07565 SM00490 helicase superfamily c-terminal domain F544_RS07565 SM00956 F544_RS07565 F544_RS07570 SM01219 F544_RS07570 F544_RS07580 SM00563 Phosphate acyltransferases F544_RS07585 SM00382 ATPases associated with a variety of cellular activities F544_RS07640 SM00957 SecA DEAD-like domain F544_RS07640 SM00958 SecA preprotein cross-linking domain F544_RS07685 SM00732 Likely ribonuclease with RNase H fold. F544_RS07690 SM00861 Transketolase, pyrimidine binding domain F544_RS07740 SM00855 Phosphoglycerate mutase family F544_RS07790 SM00382 ATPases associated with a variety of cellular activities F544_RS07855 SM01323 F544_RS07855 F544_RS07880 SM00382 ATPases associated with a variety of cellular activities F544_RS07910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain F544_RS07930 SM00460 Transglutaminase/protease-like homologues F544_RS07985 SM00342 helix_turn_helix, arabinose operon control protein F544_RS08005 SM00062 Bacterial periplasmic substrate-binding proteins F544_RS08005 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. F544_RS08010 SM00382 ATPases associated with a variety of cellular activities F544_RS08080 SM00797 Allophanate hydrolase subunit 2 F544_RS08085 SM00796 Allophanate hydrolase subunit 1 F544_RS08115 SM00481 DNA polymerase alpha chain like domain F544_RS08135 SM00479 F544_RS08135 F544_RS08145 SM00257 Lysin motif F544_RS08145 SM00646 F544_RS08145 F544_RS08190 SM00917 LeuA allosteric (dimerisation) domain F544_RS08220 SM00518 AP endonuclease family 2 F544_RS08250 SM00382 ATPases associated with a variety of cellular activities F544_RS08285 SM00937 F544_RS08285 F544_RS08290 SM00411 bacterial (prokaryotic) histone like domain F544_RS08310 SM01018 B12 binding domain F544_RS08360 SM00644 F544_RS08360 F544_RS08380 SM00382 ATPases associated with a variety of cellular activities F544_RS08405 SM00382 ATPases associated with a variety of cellular activities F544_RS08410 SM00530 Helix-turn-helix XRE-family like proteins F544_RS08435 SM00387 Histidine kinase-like ATPases F544_RS08435 SM00433 TopoisomeraseII F544_RS08495 SM00382 ATPases associated with a variety of cellular activities F544_RS08500 SM00749 bacterial OsmY and nodulation domain F544_RS08570 SM00926 Molybdopterin oxidoreductase Fe4S4 domain F544_RS08690 SM00342 helix_turn_helix, arabinose operon control protein F544_RS08705 SM00116 Domain in cystathionine beta-synthase and other proteins. F544_RS08735 SM00382 ATPases associated with a variety of cellular activities F544_RS08745 SM01022 F544_RS08745 F544_RS08795 SM01240 F544_RS08795 F544_RS08895 SM00382 ATPases associated with a variety of cellular activities F544_RS08905 SM00642 Alpha-amylase domain F544_RS08945 SM00382 ATPases associated with a variety of cellular activities F544_RS08945 SM00994 ClpX C4-type zinc finger F544_RS08945 SM01086 C-terminal, D2-small domain, of ClpB protein F544_RS08965 SM00028 Tetratricopeptide repeats F544_RS08980 SM00986 Uracil DNA glycosylase superfamily F544_RS08980 SM00987 UreE urease accessory protein, C-terminal domain F544_RS08990 SM01387 F544_RS08990 F544_RS09055 SM00450 Rhodanese Homology Domain F544_RS09065 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor F544_RS09075 SM00363 S4 RNA-binding domain F544_RS09080 SM00729 Elongator protein 3, MiaB family, Radical SAM F544_RS09080 SM00876 Biotin and Thiamin Synthesis associated domain F544_RS09120 SM00316 Ribosomal protein S1-like RNA-binding domain F544_RS09155 SM00903 Flavin reductase like domain F544_RS09210 SM00382 ATPases associated with a variety of cellular activities F544_RS09215 SM00062 Bacterial periplasmic substrate-binding proteins F544_RS09310 SM01133 F544_RS09310 F544_RS09345 SM01152 F544_RS09345 F544_RS09395 SM00825 Beta-ketoacyl synthase F544_RS09440 SM00382 ATPases associated with a variety of cellular activities F544_RS09485 SM00354 helix_turn _helix lactose operon repressor F544_RS09490 SM00640 Glycosyl hydrolases family 32 F544_RS09500 SM00363 S4 RNA-binding domain F544_RS09530 SM00859 Semialdehyde dehydrogenase, NAD binding domain F544_RS09550 SM00729 Elongator protein 3, MiaB family, Radical SAM F544_RS09560 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain F544_RS09565 SM00851 MGS-like domain F544_RS09565 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F544_RS09585 SM00062 Bacterial periplasmic substrate-binding proteins F544_RS09595 SM00420 helix_turn_helix, Deoxyribose operon repressor F544_RS09595 SM01134 F544_RS09595 F544_RS09620 SM00382 ATPases associated with a variety of cellular activities F544_RS09665 SM00382 ATPases associated with a variety of cellular activities F544_RS09690 SM00382 ATPases associated with a variety of cellular activities F544_RS09695 SM00382 ATPases associated with a variety of cellular activities F544_RS09695 SM00962 SRP54-type protein, GTPase domain F544_RS09695 SM00963 SRP54-type protein, helical bundle domain F544_RS09745 SM00984 UDP binding domain F544_RS09810 SM00870 F544_RS09810 F544_RS09830 SM00530 Helix-turn-helix XRE-family like proteins F544_RS09860 SM00662 RNA polymerases D F544_RS09865 SM00363 S4 RNA-binding domain F544_RS09865 SM01390 F544_RS09865 F544_RS09930 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. F544_RS09935 SM01374 F544_RS09935 F544_RS09940 SM00836 DALR anticodon binding domain F544_RS09940 SM01016 Arginyl tRNA synthetase N terminal dom F544_RS10060 SM00257 Lysin motif F544_RS10065 SM00257 Lysin motif F544_RS10120 SM01004 Delta-aminolevulinic acid dehydratase F544_RS10140 SM00853 MutL C terminal dimerisation domain F544_RS10140 SM01340 F544_RS10140 F544_RS10150 SM01230 F544_RS10150 F544_RS10180 SM00974 F544_RS10180 F544_RS10235 SM00530 Helix-turn-helix XRE-family like proteins F544_RS10295 SM00232 JAB/MPN domain F544_RS10405 SM01040 BRO family, N-terminal domain F544_RS10475 SM00530 Helix-turn-helix XRE-family like proteins F544_RS10565 SM00487 DEAD-like helicases superfamily F544_RS10565 SM00490 helicase superfamily c-terminal domain F544_RS10565 SM00982 F544_RS10565 F544_RS10565 SM01058 CarD-like/TRCF domain F544_RS10575 SM00480 DNA polymerase III beta subunit F544_RS10580 SM00382 ATPases associated with a variety of cellular activities F544_RS10580 SM00760 Bacterial dnaA protein helix-turn-helix domain F544_RS10600 SM00322 K homology RNA-binding domain F544_RS10615 SM01382 F544_RS10615 F544_RS10615 SM01383 F544_RS10615 F544_RS10635 SM01403 F544_RS10635 F544_RS10640 SM00487 DEAD-like helicases superfamily F544_RS10640 SM00490 helicase superfamily c-terminal domain F544_RS10655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. F544_RS10655 SM00954 Region found in RelA / SpoT proteins F544_RS10660 SM01409 F544_RS10660 F544_RS10725 SM00382 ATPases associated with a variety of cellular activities F544_RS10765 SM00563 Phosphate acyltransferases F544_RS10810 SM00342 helix_turn_helix, arabinose operon control protein F544_RS10835 SM00487 DEAD-like helicases superfamily F544_RS10910 SM00100 Cyclic nucleotide-monophosphate binding domain F544_RS10910 SM00419 helix_turn_helix, cAMP Regulatory protein F544_RS10940 SM00354 helix_turn _helix lactose operon repressor F544_RS10985 SM00448 cheY-homologous receiver domain F544_RS10985 SM00862 Transcriptional regulatory protein, C terminal F544_RS10990 SM00387 Histidine kinase-like ATPases F544_RS10990 SM00388 His Kinase A (phosphoacceptor) domain F544_RS11065 SM00563 Phosphate acyltransferases F544_RS11080 SM00825 Beta-ketoacyl synthase F544_RS11085 SM00822 F544_RS11085 F544_RS11100 SM00825 Beta-ketoacyl synthase F544_RS11125 SM00663 RNA polymerase I subunit A N-terminus F544_RS11150 SM00649 Ribosomal protein L11/L12 F544_RS11155 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. F544_RS11155 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. F544_RS11180 SM00729 Elongator protein 3, MiaB family, Radical SAM F544_RS11195 SM00382 ATPases associated with a variety of cellular activities F544_RS11195 SM01086 C-terminal, D2-small domain, of ClpB protein F544_RS11220 SM00478 endonuclease III F544_RS11220 SM00525 F544_RS11220 F544_RS11245 SM00346 helix_turn_helix isocitrate lyase regulation F544_RS11290 SM00382 ATPases associated with a variety of cellular activities F544_RS11335 SM00382 ATPases associated with a variety of cellular activities F544_RS11335 SM00962 SRP54-type protein, GTPase domain F544_RS11335 SM00963 SRP54-type protein, helical bundle domain F544_RS11340 SM00729 Elongator protein 3, MiaB family, Radical SAM F544_RS11355 SM00936 Penicillin-binding protein 5, C-terminal domain F544_RS11400 SM00650 Ribosomal RNA adenine dimethylases F544_RS11425 SM00387 Histidine kinase-like ATPases F544_RS11425 SM00433 TopoisomeraseII F544_RS11455 SM00869 Autotransporter beta-domain