locus-tag class description BADO_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix BADO_RS00005 PF00308 Bacterial dnaA protein BADO_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BADO_RS00010 PF02767 DNA polymerase III beta subunit, central domain BADO_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BADO_RS00015 PF02463 RecF/RecN/SMC N terminal domain BADO_RS00025 PF01751 Toprim domain BADO_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus BADO_RS00025 PF00204 DNA gyrase B BADO_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller BADO_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A BADO_RS00040 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BADO_RS00040 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BADO_RS00045 PF01741 Large-conductance mechanosensitive channel, MscL BADO_RS00070 PF00571 CBS domain BADO_RS00070 PF03471 Transporter associated domain BADO_RS00070 PF01595 Cyclin M transmembrane N-terminal domain BADO_RS00075 PF00484 Carbonic anhydrase BADO_RS00090 PF00311 Phosphoenolpyruvate carboxylase BADO_RS00100 PF00474 Sodium:solute symporter family BADO_RS00105 PF00579 tRNA synthetases class I (W and Y) BADO_RS00120 PF00343 Carbohydrate phosphorylase BADO_RS00140 PF06781 Cell division protein CrgA BADO_RS00150 PF04203 Sortase domain BADO_RS00155 PF00117 Glutamine amidotransferase class-I BADO_RS00160 PF00069 Protein kinase domain BADO_RS00160 PF03793 PASTA domain BADO_RS00165 PF00069 Protein kinase domain BADO_RS00170 PF00905 Penicillin binding protein transpeptidase domain BADO_RS00175 PF01098 Cell cycle protein BADO_RS00185 PF00498 FHA domain BADO_RS00185 PF03704 Bacterial transcriptional activator domain BADO_RS00185 PF00486 Transcriptional regulatory protein, C terminal BADO_RS00195 PF00326 Prolyl oligopeptidase family BADO_RS00195 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BADO_RS00205 PF00196 Bacterial regulatory proteins, luxR family BADO_RS00205 PF00072 Response regulator receiver domain BADO_RS00220 PF00011 Hsp20/alpha crystallin family BADO_RS00230 PF01702 Queuine tRNA-ribosyltransferase BADO_RS00235 PF13180 PDZ domain BADO_RS00240 PF00403 Heavy-metal-associated domain BADO_RS00245 PF17763 Glutaminase/Asparaginase C-terminal domain BADO_RS00245 PF00710 Asparaginase, N-terminal BADO_RS00250 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADO_RS00260 PF01435 Peptidase family M48 BADO_RS00275 PF00892 EamA-like transporter family BADO_RS00280 PF01061 ABC-2 type transporter BADO_RS00285 PF01061 ABC-2 type transporter BADO_RS00290 PF01116 Fructose-bisphosphate aldolase class-II BADO_RS00295 PF00709 Adenylosuccinate synthetase BADO_RS00300 PF00654 Voltage gated chloride channel BADO_RS00310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BADO_RS00315 PF02653 Branched-chain amino acid transport system / permease component BADO_RS00325 PF00005 ABC transporter BADO_RS00325 PF12399 Branched-chain amino acid ATP-binding cassette transporter BADO_RS00330 PF00005 ABC transporter BADO_RS00340 PF13407 Periplasmic binding protein domain BADO_RS00340 PF00356 Bacterial regulatory proteins, lacI family BADO_RS00350 PF07286 Protein of unknown function (DUF1445) BADO_RS00355 PF03746 LamB/YcsF family BADO_RS00360 PF09244 Domain of unknown function (DUF1964) BADO_RS00360 PF00128 Alpha amylase, catalytic domain BADO_RS00370 PF07690 Major Facilitator Superfamily BADO_RS00370 PF00083 Sugar (and other) transporter BADO_RS00375 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BADO_RS00375 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BADO_RS00380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BADO_RS00380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BADO_RS00390 PF13472 GDSL-like Lipase/Acylhydrolase family BADO_RS00390 PF17996 Carbohydrate esterase 2 N-terminal BADO_RS00395 PF00232 Glycosyl hydrolase family 1 BADO_RS00400 PF01547 Bacterial extracellular solute-binding protein BADO_RS00405 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS00410 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS00420 PF00356 Bacterial regulatory proteins, lacI family BADO_RS00440 PF02156 Glycosyl hydrolase family 26 BADO_RS00450 PF00324 Amino acid permease BADO_RS00460 PF00999 Sodium/hydrogen exchanger family BADO_RS00460 PF02254 TrkA-N domain BADO_RS00460 PF02080 TrkA-C domain BADO_RS00510 PF00324 Amino acid permease BADO_RS00515 PF05690 Thiazole biosynthesis protein ThiG BADO_RS00520 PF00899 ThiF family BADO_RS00530 PF00248 Aldo/keto reductase family BADO_RS00535 PF01047 MarR family BADO_RS00540 PF00664 ABC transporter transmembrane region BADO_RS00540 PF00005 ABC transporter BADO_RS00545 PF00664 ABC transporter transmembrane region BADO_RS00545 PF00005 ABC transporter BADO_RS00550 PF00248 Aldo/keto reductase family BADO_RS00560 PF03239 Iron permease FTR1 family BADO_RS00565 PF10634 Fe2+ transport protein BADO_RS00585 PF02687 FtsX-like permease family BADO_RS00585 PF12704 MacB-like periplasmic core domain BADO_RS00585 PF00005 ABC transporter BADO_RS00595 PF00440 Bacterial regulatory proteins, tetR family BADO_RS00600 PF01061 ABC-2 type transporter BADO_RS00605 PF01061 ABC-2 type transporter BADO_RS00615 PF00462 Glutaredoxin BADO_RS00625 PF03577 Peptidase family C69 BADO_RS00630 PF00535 Glycosyl transferase family 2 BADO_RS00635 PF00440 Bacterial regulatory proteins, tetR family BADO_RS00640 PF00448 SRP54-type protein, GTPase domain BADO_RS00640 PF02881 SRP54-type protein, helical bundle domain BADO_RS00645 PF00999 Sodium/hydrogen exchanger family BADO_RS00650 PF00909 Ammonium Transporter Family BADO_RS00655 PF00543 Nitrogen regulatory protein P-II BADO_RS00660 PF01909 Nucleotidyltransferase domain BADO_RS00660 PF08335 GlnD PII-uridylyltransferase BADO_RS00660 PF01966 HD domain BADO_RS00665 PF03796 DnaB-like helicase C terminal domain BADO_RS00665 PF00772 DnaB-like helicase N terminal domain BADO_RS00670 PF08245 Mur ligase middle domain BADO_RS00670 PF08353 Domain of unknown function (DUF1727) BADO_RS00675 PF07685 CobB/CobQ-like glutamine amidotransferase domain BADO_RS00685 PF03109 ABC1 family BADO_RS00695 PF03009 Glycerophosphoryl diester phosphodiesterase family BADO_RS00710 PF00300 Histidine phosphatase superfamily (branch 1) BADO_RS00710 PF00293 NUDIX domain BADO_RS00715 PF13090 Polyphosphate kinase C-terminal domain 2 BADO_RS00715 PF17941 Polyphosphate kinase C-terminal domain 1 BADO_RS00715 PF13089 Polyphosphate kinase N-terminal domain BADO_RS00715 PF02503 Polyphosphate kinase middle domain BADO_RS00725 PF00437 Type II/IV secretion system protein BADO_RS00755 PF00781 Diacylglycerol kinase catalytic domain BADO_RS00760 PF00440 Bacterial regulatory proteins, tetR family BADO_RS00760 PF16925 Tetracyclin repressor-like, C-terminal domain BADO_RS00765 PF12169 DNA polymerase III subunits gamma and tau domain III BADO_RS00770 PF13662 Toprim domain BADO_RS00770 PF02132 RecR protein BADO_RS00775 PF13840 ACT domain BADO_RS00775 PF01842 ACT domain BADO_RS00775 PF00696 Amino acid kinase family BADO_RS00780 PF00696 Amino acid kinase family BADO_RS00780 PF01842 ACT domain BADO_RS00780 PF13840 ACT domain BADO_RS00785 PF02774 Semialdehyde dehydrogenase, dimerisation domain BADO_RS00785 PF01118 Semialdehyde dehydrogenase, NAD binding domain BADO_RS00810 PF08502 LeuA allosteric (dimerisation) domain BADO_RS00810 PF00682 HMGL-like BADO_RS00820 PF00356 Bacterial regulatory proteins, lacI family BADO_RS00825 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain BADO_RS00825 PF04616 Glycosyl hydrolases family 43 BADO_RS00835 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS00840 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS00855 PF00905 Penicillin binding protein transpeptidase domain BADO_RS00855 PF00912 Transglycosylase BADO_RS00860 PF01658 Myo-inositol-1-phosphate synthase BADO_RS00865 PF03275 UDP-galactopyranose mutase BADO_RS00875 PF13368 Topoisomerase C-terminal repeat BADO_RS00875 PF01131 DNA topoisomerase BADO_RS00875 PF01751 Toprim domain BADO_RS00880 PF02223 Thymidylate kinase BADO_RS00885 PF12169 DNA polymerase III subunits gamma and tau domain III BADO_RS00890 PF00356 Bacterial regulatory proteins, lacI family BADO_RS00895 PF00381 PTS HPr component phosphorylation site BADO_RS00900 PF02896 PEP-utilising enzyme, TIM barrel domain BADO_RS00900 PF00391 PEP-utilising enzyme, mobile domain BADO_RS00900 PF05524 PEP-utilising enzyme, N-terminal BADO_RS00910 PF03577 Peptidase family C69 BADO_RS00915 PF01268 Formate--tetrahydrofolate ligase BADO_RS00950 PF00749 tRNA synthetases class I (E and Q), catalytic domain BADO_RS00975 PF00330 Aconitase family (aconitate hydratase) BADO_RS00980 PF00694 Aconitase C-terminal domain BADO_RS00990 PF01180 Dihydroorotate dehydrogenase BADO_RS00995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BADO_RS01005 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BADO_RS01005 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BADO_RS01010 PF01820 D-ala D-ala ligase N-terminus BADO_RS01010 PF07478 D-ala D-ala ligase C-terminus BADO_RS01030 PF08402 TOBE domain BADO_RS01030 PF00005 ABC transporter BADO_RS01055 PF14278 Transcriptional regulator C-terminal region BADO_RS01055 PF00440 Bacterial regulatory proteins, tetR family BADO_RS01060 PF00155 Aminotransferase class I and II BADO_RS01065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BADO_RS01065 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BADO_RS01070 PF02447 GntP family permease BADO_RS01090 PF11700 Vacuole effluxer Atg22 like BADO_RS01095 PF00830 Ribosomal L28 family BADO_RS01100 PF00270 DEAD/DEAH box helicase BADO_RS01100 PF17191 RecG wedge domain BADO_RS01100 PF00271 Helicase conserved C-terminal domain BADO_RS01110 PF01746 tRNA (Guanine-1)-methyltransferase BADO_RS01115 PF01782 RimM N-terminal domain BADO_RS01125 PF00886 Ribosomal protein S16 BADO_RS01135 PF02978 Signal peptide binding domain BADO_RS01135 PF02881 SRP54-type protein, helical bundle domain BADO_RS01135 PF00448 SRP54-type protein, GTPase domain BADO_RS01140 PF09190 DALR domain BADO_RS01140 PF01406 tRNA synthetases class I (C) catalytic domain BADO_RS01145 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BADO_RS01145 PF00117 Glutamine amidotransferase class-I BADO_RS01150 PF12848 ABC transporter BADO_RS01150 PF00005 ABC transporter BADO_RS01150 PF16326 ABC transporter C-terminal domain BADO_RS01170 PF00072 Response regulator receiver domain BADO_RS01170 PF00158 Sigma-54 interaction domain BADO_RS01170 PF02954 Bacterial regulatory protein, Fis family BADO_RS01185 PF01842 ACT domain BADO_RS01185 PF10369 Small subunit of acetolactate synthase BADO_RS01190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BADO_RS01190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADO_RS01190 PF00205 Thiamine pyrophosphate enzyme, central domain BADO_RS01195 PF00035 Double-stranded RNA binding motif BADO_RS01195 PF14622 Ribonuclease-III-like BADO_RS01200 PF01783 Ribosomal L32p protein family BADO_RS01205 PF02620 Large ribosomal RNA subunit accumulation protein YceD BADO_RS01215 PF01467 Cytidylyltransferase-like BADO_RS01225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BADO_RS01225 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BADO_RS01230 PF01138 3' exoribonuclease family, domain 1 BADO_RS01230 PF03725 3' exoribonuclease family, domain 2 BADO_RS01235 PF01725 Ham1 family BADO_RS01255 PF00342 Phosphoglucose isomerase BADO_RS01260 PF01245 Ribosomal protein L19 BADO_RS01265 PF10502 Signal peptidase, peptidase S26 BADO_RS01270 PF01351 Ribonuclease HII BADO_RS01275 PF00005 ABC transporter BADO_RS01290 PF01546 Peptidase family M20/M25/M40 BADO_RS01290 PF07687 Peptidase dimerisation domain BADO_RS01295 PF10150 Ribonuclease E/G family BADO_RS01300 PF00829 Ribosomal prokaryotic L21 protein BADO_RS01305 PF01016 Ribosomal L27 protein BADO_RS01310 PF01926 50S ribosome-binding GTPase BADO_RS01310 PF01018 GTP1/OBG BADO_RS01310 PF09269 Domain of unknown function (DUF1967) BADO_RS01315 PF00696 Amino acid kinase family BADO_RS01315 PF01472 PUA domain BADO_RS01320 PF00155 Aminotransferase class I and II BADO_RS01330 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BADO_RS01335 PF02357 Transcription termination factor nusG BADO_RS01340 PF03946 Ribosomal protein L11, N-terminal domain BADO_RS01340 PF00298 Ribosomal protein L11, RNA binding domain BADO_RS01345 PF00687 Ribosomal protein L1p/L10e family BADO_RS01350 PF13556 PucR C-terminal helix-turn-helix domain BADO_RS01350 PF17853 GGDEF-like domain BADO_RS01365 PF02632 BioY family BADO_RS01370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BADO_RS01370 PF02785 Biotin carboxylase C-terminal domain BADO_RS01370 PF00289 Biotin carboxylase, N-terminal domain BADO_RS01370 PF00364 Biotin-requiring enzyme BADO_RS01375 PF01039 Carboxyl transferase domain BADO_RS01385 PF01648 4'-phosphopantetheinyl transferase superfamily BADO_RS01400 PF00312 Ribosomal protein S15 BADO_RS01405 PF00013 KH domain BADO_RS01405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BADO_RS01405 PF01138 3' exoribonuclease family, domain 1 BADO_RS01405 PF00575 S1 RNA binding domain BADO_RS01410 PF04011 LemA family BADO_RS01425 PF00248 Aldo/keto reductase family BADO_RS01435 PF00392 Bacterial regulatory proteins, gntR family BADO_RS01435 PF00155 Aminotransferase class I and II BADO_RS01440 PF01136 Peptidase family U32 BADO_RS01440 PF16325 Peptidase family U32 C-terminal domain BADO_RS01445 PF02578 Multi-copper polyphenol oxidoreductase laccase BADO_RS01450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BADO_RS01455 PF01470 Pyroglutamyl peptidase BADO_RS01465 PF03051 Peptidase C1-like family BADO_RS01470 PF00793 DAHP synthetase I family BADO_RS01475 PF00793 DAHP synthetase I family BADO_RS01480 PF01048 Phosphorylase superfamily BADO_RS01485 PF00512 His Kinase A (phospho-acceptor) domain BADO_RS01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS01490 PF00072 Response regulator receiver domain BADO_RS01490 PF00486 Transcriptional regulatory protein, C terminal BADO_RS01495 PF12849 PBP superfamily domain BADO_RS01500 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS01505 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS01510 PF00005 ABC transporter BADO_RS01520 PF00860 Permease family BADO_RS01525 PF00466 Ribosomal protein L10 BADO_RS01530 PF16320 Ribosomal protein L7/L12 dimerisation domain BADO_RS01530 PF00542 Ribosomal protein L7/L12 C-terminal domain BADO_RS01560 PF01812 5-formyltetrahydrofolate cyclo-ligase family BADO_RS01575 PF00166 Chaperonin 10 Kd subunit BADO_RS01595 PF00471 Ribosomal protein L33 BADO_RS01600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BADO_RS01600 PF01565 FAD binding domain BADO_RS01605 PF13520 Amino acid permease BADO_RS01610 PF00037 4Fe-4S binding domain BADO_RS01615 PF00155 Aminotransferase class I and II BADO_RS01625 PF01270 Glycosyl hydrolases family 8 BADO_RS01630 PF04616 Glycosyl hydrolases family 43 BADO_RS01630 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BADO_RS01635 PF00135 Carboxylesterase family BADO_RS01645 PF11798 IMS family HHH motif BADO_RS01645 PF11799 impB/mucB/samB family C-terminal domain BADO_RS01645 PF00817 impB/mucB/samB family BADO_RS01655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BADO_RS01655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BADO_RS01660 PF09186 Domain of unknown function (DUF1949) BADO_RS01660 PF01205 Uncharacterized protein family UPF0029 BADO_RS01670 PF02446 4-alpha-glucanotransferase BADO_RS01675 PF00572 Ribosomal protein L13 BADO_RS01680 PF00380 Ribosomal protein S9/S16 BADO_RS01685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BADO_RS01685 PF00128 Alpha amylase, catalytic domain BADO_RS01700 PF07690 Major Facilitator Superfamily BADO_RS01705 PF08240 Alcohol dehydrogenase GroES-like domain BADO_RS01705 PF00107 Zinc-binding dehydrogenase BADO_RS01715 PF00171 Aldehyde dehydrogenase family BADO_RS01715 PF00465 Iron-containing alcohol dehydrogenase BADO_RS01720 PF00338 Ribosomal protein S10p/S20e BADO_RS01725 PF00297 Ribosomal protein L3 BADO_RS01730 PF00573 Ribosomal protein L4/L1 family BADO_RS01735 PF00276 Ribosomal protein L23 BADO_RS01740 PF00181 Ribosomal Proteins L2, RNA binding domain BADO_RS01740 PF03947 Ribosomal Proteins L2, C-terminal domain BADO_RS01745 PF00203 Ribosomal protein S19 BADO_RS01750 PF00237 Ribosomal protein L22p/L17e BADO_RS01755 PF00189 Ribosomal protein S3, C-terminal domain BADO_RS01755 PF07650 KH domain BADO_RS01760 PF00252 Ribosomal protein L16p/L10e BADO_RS01765 PF00831 Ribosomal L29 protein BADO_RS01770 PF00366 Ribosomal protein S17 BADO_RS01775 PF00238 Ribosomal protein L14p/L23e BADO_RS01780 PF00467 KOW motif BADO_RS01780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BADO_RS01785 PF00281 Ribosomal protein L5 BADO_RS01785 PF00673 ribosomal L5P family C-terminus BADO_RS01790 PF00253 Ribosomal protein S14p/S29e BADO_RS01795 PF00410 Ribosomal protein S8 BADO_RS01800 PF00347 Ribosomal protein L6 BADO_RS01805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BADO_RS01810 PF03719 Ribosomal protein S5, C-terminal domain BADO_RS01810 PF00333 Ribosomal protein S5, N-terminal domain BADO_RS01815 PF00327 Ribosomal protein L30p/L7e BADO_RS01820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BADO_RS01825 PF00344 SecY translocase BADO_RS01835 PF01176 Translation initiation factor 1A / IF-1 BADO_RS01840 PF00444 Ribosomal protein L36 BADO_RS01845 PF00416 Ribosomal protein S13/S18 BADO_RS01850 PF00411 Ribosomal protein S11 BADO_RS01855 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BADO_RS01855 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BADO_RS01855 PF01000 RNA polymerase Rpb3/RpoA insert domain BADO_RS01860 PF01196 Ribosomal protein L17 BADO_RS01865 PF01416 tRNA pseudouridine synthase BADO_RS01870 PF14403 Circularly permuted ATP-grasp type 2 BADO_RS01890 PF13184 NusA-like KH domain BADO_RS01890 PF08529 NusA N-terminal domain BADO_RS01895 PF00009 Elongation factor Tu GTP binding domain BADO_RS01895 PF11987 Translation-initiation factor 2 BADO_RS01895 PF04760 Translation initiation factor IF-2, N-terminal region BADO_RS01900 PF02033 Ribosome-binding factor A BADO_RS01905 PF01509 TruB family pseudouridylate synthase (N terminal domain) BADO_RS01905 PF09142 tRNA Pseudouridine synthase II, C terminal BADO_RS01905 PF16198 tRNA pseudouridylate synthase B C-terminal domain BADO_RS01910 PF06574 FAD synthetase BADO_RS01910 PF01687 Riboflavin kinase BADO_RS01915 PF18073 Rubredoxin metal binding domain BADO_RS01925 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BADO_RS01930 PF00075 RNase H BADO_RS01935 PF17203 Single cache domain 3 BADO_RS01935 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BADO_RS01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS01935 PF00989 PAS fold BADO_RS01945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BADO_RS01945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BADO_RS01945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BADO_RS01945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BADO_RS01950 PF00367 phosphotransferase system, EIIB BADO_RS01950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADO_RS01950 PF02378 Phosphotransferase system, EIIC BADO_RS01955 PF03123 CAT RNA binding domain BADO_RS01955 PF00874 PRD domain BADO_RS01960 PF00781 Diacylglycerol kinase catalytic domain BADO_RS01960 PF02142 MGS-like domain BADO_RS01965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BADO_RS01965 PF02403 Seryl-tRNA synthetase N-terminal domain BADO_RS01975 PF00072 Response regulator receiver domain BADO_RS01975 PF00196 Bacterial regulatory proteins, luxR family BADO_RS02000 PF07690 Major Facilitator Superfamily BADO_RS02010 PF01336 OB-fold nucleic acid binding domain BADO_RS02010 PF00152 tRNA synthetases class II (D, K and N) BADO_RS02015 PF01040 UbiA prenyltransferase family BADO_RS02020 PF00300 Histidine phosphatase superfamily (branch 1) BADO_RS02025 PF06100 MCRA family BADO_RS02030 PF01895 PhoU domain BADO_RS02035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS02035 PF00512 His Kinase A (phospho-acceptor) domain BADO_RS02045 PF00266 Aminotransferase class-V BADO_RS02050 PF05257 CHAP domain BADO_RS02050 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BADO_RS02055 PF00877 NlpC/P60 family BADO_RS02060 PF00582 Universal stress protein family BADO_RS02065 PF02566 OsmC-like protein BADO_RS02070 PF00303 Thymidylate synthase BADO_RS02075 PF00186 Dihydrofolate reductase BADO_RS02080 PF01451 Low molecular weight phosphotyrosine protein phosphatase BADO_RS02090 PF16363 GDP-mannose 4,6 dehydratase BADO_RS02095 PF02390 Putative methyltransferase BADO_RS02155 PF00990 Diguanylate cyclase, GGDEF domain BADO_RS02155 PF00498 FHA domain BADO_RS02155 PF00563 EAL domain BADO_RS02160 PF00465 Iron-containing alcohol dehydrogenase BADO_RS02165 PF00535 Glycosyl transferase family 2 BADO_RS02175 PF00535 Glycosyl transferase family 2 BADO_RS02185 PF00156 Phosphoribosyl transferase domain BADO_RS02190 PF17862 AAA+ lid domain BADO_RS02190 PF00004 ATPase family associated with various cellular activities (AAA) BADO_RS02190 PF01434 Peptidase family M41 BADO_RS02195 PF01227 GTP cyclohydrolase I BADO_RS02200 PF00809 Pterin binding enzyme BADO_RS02205 PF02152 Dihydroneopterin aldolase BADO_RS02220 PF00005 ABC transporter BADO_RS02220 PF12848 ABC transporter BADO_RS02230 PF01327 Polypeptide deformylase BADO_RS02235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BADO_RS02235 PF01872 RibD C-terminal domain BADO_RS02250 PF01053 Cys/Met metabolism PLP-dependent enzyme BADO_RS02255 PF01261 Xylose isomerase-like TIM barrel BADO_RS02260 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BADO_RS02260 PF04616 Glycosyl hydrolases family 43 BADO_RS02265 PF00356 Bacterial regulatory proteins, lacI family BADO_RS02270 PF13416 Bacterial extracellular solute-binding protein BADO_RS02275 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02280 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02285 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BADO_RS02285 PF04616 Glycosyl hydrolases family 43 BADO_RS02295 PF00135 Carboxylesterase family BADO_RS02305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BADO_RS02305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BADO_RS02310 PF00480 ROK family BADO_RS02320 PF00356 Bacterial regulatory proteins, lacI family BADO_RS02330 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02335 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02340 PF07944 Beta-L-arabinofuranosidase, GH127 BADO_RS02375 PF00480 ROK family BADO_RS02380 PF00440 Bacterial regulatory proteins, tetR family BADO_RS02380 PF13305 Tetracyclin repressor-like, C-terminal domain BADO_RS02390 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BADO_RS02390 PF06165 Glycosyltransferase family 36 BADO_RS02400 PF01197 Ribosomal protein L31 BADO_RS02405 PF00472 RF-1 domain BADO_RS02405 PF03462 PCRF domain BADO_RS02410 PF17827 PrmC N-terminal domain BADO_RS02415 PF13458 Periplasmic binding protein BADO_RS02420 PF02653 Branched-chain amino acid transport system / permease component BADO_RS02425 PF02653 Branched-chain amino acid transport system / permease component BADO_RS02425 PF11862 Domain of unknown function (DUF3382) BADO_RS02430 PF12399 Branched-chain amino acid ATP-binding cassette transporter BADO_RS02430 PF00005 ABC transporter BADO_RS02435 PF00005 ABC transporter BADO_RS02440 PF01300 Telomere recombination BADO_RS02445 PF00953 Glycosyl transferase family 4 BADO_RS02450 PF00478 IMP dehydrogenase / GMP reductase domain BADO_RS02450 PF00571 CBS domain BADO_RS02455 PF00356 Bacterial regulatory proteins, lacI family BADO_RS02460 PF00128 Alpha amylase, catalytic domain BADO_RS02465 PF00929 Exonuclease BADO_RS02475 PF05970 PIF1-like helicase BADO_RS02475 PF14493 Helix-turn-helix domain BADO_RS02485 PF03129 Anticodon binding domain BADO_RS02485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BADO_RS02485 PF04073 Aminoacyl-tRNA editing domain BADO_RS02495 PF01431 Peptidase family M13 BADO_RS02495 PF05649 Peptidase family M13 BADO_RS02500 PF00557 Metallopeptidase family M24 BADO_RS02505 PF00285 Citrate synthase, C-terminal domain BADO_RS02510 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BADO_RS02510 PF14602 Hexapeptide repeat of succinyl-transferase BADO_RS02515 PF02590 Predicted SPOUT methyltransferase BADO_RS02520 PF00472 RF-1 domain BADO_RS02520 PF03462 PCRF domain BADO_RS02525 PF00005 ABC transporter BADO_RS02530 PF02687 FtsX-like permease family BADO_RS02530 PF18075 FtsX extracellular domain BADO_RS02535 PF05257 CHAP domain BADO_RS02535 PF01476 LysM domain BADO_RS02540 PF01668 SmpB protein BADO_RS02545 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADO_RS02555 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADO_RS02560 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02565 PF00005 ABC transporter BADO_RS02570 PF01380 SIS domain BADO_RS02575 PF00849 RNA pseudouridylate synthase BADO_RS02580 PF00375 Sodium:dicarboxylate symporter family BADO_RS02590 PF03309 Type III pantothenate kinase BADO_RS02595 PF04127 DNA / pantothenate metabolism flavoprotein BADO_RS02595 PF02441 Flavoprotein BADO_RS02600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADO_RS02605 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02610 PF12911 N-terminal TM domain of oligopeptide transport permease C BADO_RS02610 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02615 PF00005 ABC transporter BADO_RS02615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADO_RS02620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADO_RS02620 PF00005 ABC transporter BADO_RS02630 PF00291 Pyridoxal-phosphate dependent enzyme BADO_RS02630 PF00571 CBS domain BADO_RS02635 PF01053 Cys/Met metabolism PLP-dependent enzyme BADO_RS02640 PF16124 RecQ zinc-binding BADO_RS02640 PF09382 RQC domain BADO_RS02640 PF00570 HRDC domain BADO_RS02640 PF00271 Helicase conserved C-terminal domain BADO_RS02640 PF00270 DEAD/DEAH box helicase BADO_RS02645 PF02664 S-Ribosylhomocysteinase (LuxS) BADO_RS02655 PF13520 Amino acid permease BADO_RS02660 PF01168 Alanine racemase, N-terminal domain BADO_RS02660 PF00842 Alanine racemase, C-terminal domain BADO_RS02665 PF13286 Phosphohydrolase-associated domain BADO_RS02665 PF01966 HD domain BADO_RS02670 PF08278 DNA primase DnaG DnaB-binding BADO_RS02670 PF10410 DnaB-helicase binding domain of primase BADO_RS02670 PF13662 Toprim domain BADO_RS02670 PF01807 CHC2 zinc finger BADO_RS02670 PF08275 DNA primase catalytic core, N-terminal domain BADO_RS02690 PF00009 Elongation factor Tu GTP binding domain BADO_RS02690 PF00679 Elongation factor G C-terminus BADO_RS02690 PF14492 Elongation Factor G, domain II BADO_RS02690 PF03764 Elongation factor G, domain IV BADO_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02720 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS02725 PF00005 ABC transporter BADO_RS02730 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADO_RS02735 PF01053 Cys/Met metabolism PLP-dependent enzyme BADO_RS02740 PF01145 SPFH domain / Band 7 family BADO_RS02750 PF00005 ABC transporter BADO_RS02750 PF02687 FtsX-like permease family BADO_RS02750 PF12704 MacB-like periplasmic core domain BADO_RS02760 PF02687 FtsX-like permease family BADO_RS02760 PF12704 MacB-like periplasmic core domain BADO_RS02765 PF02780 Transketolase, C-terminal domain BADO_RS02765 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BADO_RS02765 PF02779 Transketolase, pyrimidine binding domain BADO_RS02770 PF00107 Zinc-binding dehydrogenase BADO_RS02770 PF08240 Alcohol dehydrogenase GroES-like domain BADO_RS02775 PF00731 AIR carboxylase BADO_RS02780 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BADO_RS02780 PF02222 ATP-grasp domain BADO_RS02790 PF00884 Sulfatase BADO_RS02795 PF02844 Phosphoribosylglycinamide synthetase, N domain BADO_RS02795 PF02843 Phosphoribosylglycinamide synthetase, C domain BADO_RS02795 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BADO_RS02800 PF00586 AIR synthase related protein, N-terminal domain BADO_RS02800 PF02769 AIR synthase related protein, C-terminal domain BADO_RS02805 PF13537 Glutamine amidotransferase domain BADO_RS02805 PF00156 Phosphoribosyl transferase domain BADO_RS02810 PF00817 impB/mucB/samB family BADO_RS02810 PF11798 IMS family HHH motif BADO_RS02810 PF11799 impB/mucB/samB family C-terminal domain BADO_RS02820 PF02769 AIR synthase related protein, C-terminal domain BADO_RS02820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BADO_RS02820 PF00586 AIR synthase related protein, N-terminal domain BADO_RS02825 PF01259 SAICAR synthetase BADO_RS02830 PF02222 ATP-grasp domain BADO_RS02850 PF01758 Sodium Bile acid symporter family BADO_RS02855 PF00164 Ribosomal protein S12/S23 BADO_RS02860 PF00177 Ribosomal protein S7p/S5e BADO_RS02865 PF00679 Elongation factor G C-terminus BADO_RS02865 PF14492 Elongation Factor G, domain II BADO_RS02865 PF03764 Elongation factor G, domain IV BADO_RS02865 PF00009 Elongation factor Tu GTP binding domain BADO_RS02865 PF03144 Elongation factor Tu domain 2 BADO_RS02870 PF03143 Elongation factor Tu C-terminal domain BADO_RS02870 PF03144 Elongation factor Tu domain 2 BADO_RS02870 PF00009 Elongation factor Tu GTP binding domain BADO_RS02875 PF01132 Elongation factor P (EF-P) OB domain BADO_RS02875 PF08207 Elongation factor P (EF-P) KOW-like domain BADO_RS02875 PF09285 Elongation factor P, C-terminal BADO_RS02880 PF01029 NusB family BADO_RS02885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BADO_RS02885 PF00117 Glutamine amidotransferase class-I BADO_RS02890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BADO_RS02890 PF02142 MGS-like domain BADO_RS02890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BADO_RS02895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BADO_RS02900 PF00625 Guanylate kinase BADO_RS02905 PF00920 Dehydratase family BADO_RS02910 PF01192 RNA polymerase Rpb6 BADO_RS02915 PF00438 S-adenosylmethionine synthetase, N-terminal domain BADO_RS02915 PF02773 S-adenosylmethionine synthetase, C-terminal domain BADO_RS02915 PF02772 S-adenosylmethionine synthetase, central domain BADO_RS02920 PF17764 3′ DNA-binding domain (3′BD) BADO_RS02925 PF13419 Haloacid dehalogenase-like hydrolase BADO_RS02930 PF02911 Formyl transferase, C-terminal domain BADO_RS02930 PF00551 Formyl transferase BADO_RS02940 PF00004 ATPase family associated with various cellular activities (AAA) BADO_RS02940 PF16450 Proteasomal ATPase OB C-terminal domain BADO_RS02940 PF17758 Proteasomal ATPase OB N-terminal domain BADO_RS02945 PF03136 Pup-ligase protein BADO_RS02950 PF00459 Inositol monophosphatase family BADO_RS02955 PF05639 Pup-like protein BADO_RS02960 PF03136 Pup-ligase protein BADO_RS02975 PF00216 Bacterial DNA-binding protein BADO_RS02985 PF08328 Adenylosuccinate lyase C-terminal BADO_RS02985 PF00206 Lyase BADO_RS03025 PF07726 ATPase family associated with various cellular activities (AAA) BADO_RS03025 PF17863 AAA lid domain BADO_RS03030 PF03167 Uracil DNA glycosylase superfamily BADO_RS03040 PF00118 TCP-1/cpn60 chaperonin family BADO_RS03055 PF00486 Transcriptional regulatory protein, C terminal BADO_RS03055 PF00072 Response regulator receiver domain BADO_RS03060 PF00512 His Kinase A (phospho-acceptor) domain BADO_RS03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS03060 PF00672 HAMP domain BADO_RS03065 PF00313 'Cold-shock' DNA-binding domain BADO_RS03070 PF11228 Protein of unknown function (DUF3027) BADO_RS03075 PF00582 Universal stress protein family BADO_RS03080 PF00004 ATPase family associated with various cellular activities (AAA) BADO_RS03080 PF07724 AAA domain (Cdc48 subfamily) BADO_RS03080 PF17871 AAA lid domain BADO_RS03080 PF02861 Clp amino terminal domain, pathogenicity island component BADO_RS03080 PF10431 C-terminal, D2-small domain, of ClpB protein BADO_RS03085 PF03993 Domain of Unknown Function (DUF349) BADO_RS03090 PF13393 Histidyl-tRNA synthetase BADO_RS03090 PF03129 Anticodon binding domain BADO_RS03095 PF00152 tRNA synthetases class II (D, K and N) BADO_RS03095 PF01336 OB-fold nucleic acid binding domain BADO_RS03095 PF02938 GAD domain BADO_RS03100 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS03105 PF00005 ABC transporter BADO_RS03110 PF00005 ABC transporter BADO_RS03115 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADO_RS03120 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS03125 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS03130 PF03976 Polyphosphate kinase 2 (PPK2) BADO_RS03135 PF00270 DEAD/DEAH box helicase BADO_RS03135 PF00271 Helicase conserved C-terminal domain BADO_RS03135 PF08148 DSHCT (NUC185) domain BADO_RS03140 PF12002 MgsA AAA+ ATPase C terminal BADO_RS03140 PF16193 AAA C-terminal domain BADO_RS03140 PF00004 ATPase family associated with various cellular activities (AAA) BADO_RS03145 PF07690 Major Facilitator Superfamily BADO_RS03150 PF00574 Clp protease BADO_RS03155 PF00574 Clp protease BADO_RS03160 PF06689 ClpX C4-type zinc finger BADO_RS03160 PF07724 AAA domain (Cdc48 subfamily) BADO_RS03160 PF10431 C-terminal, D2-small domain, of ClpB protein BADO_RS03175 PF06965 Na+/H+ antiporter 1 BADO_RS03185 PF13085 2Fe-2S iron-sulfur cluster binding domain BADO_RS03190 PF02910 Fumarate reductase flavoprotein C-term BADO_RS03190 PF00890 FAD binding domain BADO_RS03195 PF17782 DprA winged helix domain BADO_RS03195 PF02481 DNA recombination-mediator protein A BADO_RS03200 PF01078 Magnesium chelatase, subunit ChlI BADO_RS03200 PF13335 Magnesium chelatase, subunit ChlI C-terminal BADO_RS03205 PF02021 Uncharacterised protein family UPF0102 BADO_RS03215 PF01053 Cys/Met metabolism PLP-dependent enzyme BADO_RS03225 PF00005 ABC transporter BADO_RS03230 PF02361 Cobalt transport protein BADO_RS03240 PF00005 ABC transporter BADO_RS03245 PF02687 FtsX-like permease family BADO_RS03245 PF00005 ABC transporter BADO_RS03245 PF12704 MacB-like periplasmic core domain BADO_RS03250 PF00072 Response regulator receiver domain BADO_RS03250 PF00196 Bacterial regulatory proteins, luxR family BADO_RS03255 PF07730 Histidine kinase BADO_RS03260 PF00561 alpha/beta hydrolase fold BADO_RS03265 PF03807 NADP oxidoreductase coenzyme F420-dependent BADO_RS03265 PF14748 Pyrroline-5-carboxylate reductase dimerisation BADO_RS03270 PF01926 50S ribosome-binding GTPase BADO_RS03270 PF06071 Protein of unknown function (DUF933) BADO_RS03275 PF00589 Phage integrase family BADO_RS03275 PF02899 Phage integrase, N-terminal SAM-like domain BADO_RS03310 PF01336 OB-fold nucleic acid binding domain BADO_RS03310 PF00929 Exonuclease BADO_RS03310 PF14579 Helix-hairpin-helix motif BADO_RS03310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BADO_RS03310 PF07733 Bacterial DNA polymerase III alpha NTPase domain BADO_RS03310 PF11490 DNA polymerase III polC-type N-terminus II BADO_RS03310 PF02811 PHP domain BADO_RS03355 PF07690 Major Facilitator Superfamily BADO_RS03370 PF17910 FeoB cytosolic helical domain BADO_RS03370 PF07670 Nucleoside recognition BADO_RS03370 PF07664 Ferrous iron transport protein B C terminus BADO_RS03370 PF04023 FeoA domain BADO_RS03370 PF02421 Ferrous iron transport protein B BADO_RS03390 PF03601 Conserved hypothetical protein 698 BADO_RS03410 PF01925 Sulfite exporter TauE/SafE BADO_RS03415 PF00589 Phage integrase family BADO_RS03415 PF02899 Phage integrase, N-terminal SAM-like domain BADO_RS03420 PF00925 GTP cyclohydrolase II BADO_RS03420 PF08719 Domain of unknown function (DUF1768) BADO_RS03440 PF12161 HsdM N-terminal domain BADO_RS03440 PF02384 N-6 DNA Methylase BADO_RS03450 PF18766 SWI2/SNF2 ATPase BADO_RS03450 PF12008 Type I restriction and modification enzyme - subunit R C terminal BADO_RS03450 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BADO_RS03455 PF02311 AraC-like ligand binding domain BADO_RS03455 PF12833 Helix-turn-helix domain BADO_RS03465 PF00860 Permease family BADO_RS03470 PF00106 short chain dehydrogenase BADO_RS03475 PF00271 Helicase conserved C-terminal domain BADO_RS03475 PF00270 DEAD/DEAH box helicase BADO_RS03480 PF03649 Uncharacterised protein family (UPF0014) BADO_RS03485 PF00005 ABC transporter BADO_RS03495 PF09924 Uncharacterised conserved protein (DUF2156) BADO_RS03500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BADO_RS03500 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BADO_RS03505 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BADO_RS03515 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BADO_RS03515 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BADO_RS03530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BADO_RS03530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BADO_RS03540 PF00155 Aminotransferase class I and II BADO_RS03550 PF02525 Flavodoxin-like fold BADO_RS03555 PF03591 AzlC protein BADO_RS03560 PF05437 Branched-chain amino acid transport protein (AzlD) BADO_RS03565 PF00933 Glycosyl hydrolase family 3 N terminal domain BADO_RS03570 PF03699 Uncharacterised protein family (UPF0182) BADO_RS03580 PF01195 Peptidyl-tRNA hydrolase BADO_RS03585 PF17757 UvrB interaction domain BADO_RS03585 PF03461 TRCF domain BADO_RS03585 PF02559 CarD-like/TRCF domain BADO_RS03585 PF00270 DEAD/DEAH box helicase BADO_RS03585 PF00271 Helicase conserved C-terminal domain BADO_RS03590 PF00113 Enolase, C-terminal TIM barrel domain BADO_RS03590 PF03952 Enolase, N-terminal domain BADO_RS03605 PF02541 Ppx/GppA phosphatase family BADO_RS03620 PF03315 Serine dehydratase beta chain BADO_RS03620 PF03313 Serine dehydratase alpha chain BADO_RS03625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADO_RS03630 PF01272 Transcription elongation factor, GreA/GreB, C-term BADO_RS03630 PF03449 Transcription elongation factor, N-terminal BADO_RS03635 PF03006 Haemolysin-III related BADO_RS03640 PF12282 Signal transduction histidine kinase BADO_RS03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS03640 PF07568 Histidine kinase BADO_RS03645 PF02467 Transcription factor WhiB BADO_RS03650 PF12538 DNA transporter BADO_RS03650 PF01580 FtsK/SpoIIIE family BADO_RS03655 PF13399 LytR cell envelope-related transcriptional attenuator BADO_RS03655 PF03816 Cell envelope-related transcriptional attenuator domain BADO_RS03665 PF03816 Cell envelope-related transcriptional attenuator domain BADO_RS03670 PF02467 Transcription factor WhiB BADO_RS03700 PF00512 His Kinase A (phospho-acceptor) domain BADO_RS03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS03700 PF00672 HAMP domain BADO_RS03705 PF00486 Transcriptional regulatory protein, C terminal BADO_RS03705 PF00072 Response regulator receiver domain BADO_RS03710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BADO_RS03710 PF02806 Alpha amylase, C-terminal all-beta domain BADO_RS03710 PF00128 Alpha amylase, catalytic domain BADO_RS03715 PF02559 CarD-like/TRCF domain BADO_RS03720 PF02542 YgbB family BADO_RS03725 PF00950 ABC 3 transport family BADO_RS03730 PF00005 ABC transporter BADO_RS03735 PF01297 Zinc-uptake complex component A periplasmic BADO_RS03740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BADO_RS03740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BADO_RS03745 PF00575 S1 RNA binding domain BADO_RS03750 PF01121 Dephospho-CoA kinase BADO_RS03755 PF04851 Type III restriction enzyme, res subunit BADO_RS03755 PF02151 UvrB/uvrC motif BADO_RS03755 PF00271 Helicase conserved C-terminal domain BADO_RS03755 PF12344 Ultra-violet resistance protein B BADO_RS03755 PF17757 UvrB interaction domain BADO_RS03760 PF03741 Integral membrane protein TerC family BADO_RS03765 PF02887 Pyruvate kinase, alpha/beta domain BADO_RS03765 PF00224 Pyruvate kinase, barrel domain BADO_RS03775 PF03861 ANTAR domain BADO_RS03775 PF00072 Response regulator receiver domain BADO_RS03780 PF01367 5'-3' exonuclease, C-terminal SAM fold BADO_RS03780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BADO_RS03780 PF00476 DNA polymerase family A BADO_RS03785 PF01784 NIF3 (NGG1p interacting factor 3) BADO_RS03790 PF00293 NUDIX domain BADO_RS03795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BADO_RS03795 PF00128 Alpha amylase, catalytic domain BADO_RS03815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BADO_RS03820 PF02540 NAD synthase BADO_RS03820 PF00117 Glutamine amidotransferase class-I BADO_RS03820 PF00958 GMP synthase C terminal domain BADO_RS03825 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BADO_RS03825 PF09364 XFP N-terminal domain BADO_RS03825 PF09363 XFP C-terminal domain BADO_RS03830 PF01515 Phosphate acetyl/butaryl transferase BADO_RS03830 PF07085 DRTGG domain BADO_RS03835 PF00871 Acetokinase family BADO_RS03840 PF01757 Acyltransferase family BADO_RS03845 PF00860 Permease family BADO_RS03850 PF00156 Phosphoribosyl transferase domain BADO_RS03855 PF13361 UvrD-like helicase C-terminal domain BADO_RS03855 PF00580 UvrD/REP helicase N-terminal domain BADO_RS03870 PF00005 ABC transporter BADO_RS03875 PF00163 Ribosomal protein S4/S9 N-terminal domain BADO_RS03875 PF01479 S4 domain BADO_RS03880 PF00300 Histidine phosphatase superfamily (branch 1) BADO_RS03900 PF03652 Holliday junction resolvase BADO_RS03915 PF01264 Chorismate synthase BADO_RS03920 PF01761 3-dehydroquinate synthase BADO_RS03920 PF01202 Shikimate kinase BADO_RS03925 PF01220 Dehydroquinase class II BADO_RS03930 PF00686 Starch binding domain BADO_RS03930 PF02806 Alpha amylase, C-terminal all-beta domain BADO_RS03930 PF00128 Alpha amylase, catalytic domain BADO_RS03935 PF00128 Alpha amylase, catalytic domain BADO_RS03935 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BADO_RS03935 PF03714 Bacterial pullanase-associated domain BADO_RS03940 PF06418 CTP synthase N-terminus BADO_RS03940 PF00117 Glutamine amidotransferase class-I BADO_RS03945 PF01458 Uncharacterized protein family (UPF0051) BADO_RS03950 PF01458 Uncharacterized protein family (UPF0051) BADO_RS03955 PF00005 ABC transporter BADO_RS03960 PF00266 Aminotransferase class-V BADO_RS03965 PF01592 NifU-like N terminal domain BADO_RS03970 PF01883 Iron-sulfur cluster assembly protein BADO_RS03975 PF00483 Nucleotidyl transferase BADO_RS03980 PF00588 SpoU rRNA Methylase family BADO_RS03990 PF04452 RNA methyltransferase BADO_RS03995 PF01230 HIT domain BADO_RS04000 PF02562 PhoH-like protein BADO_RS04005 PF02130 Uncharacterized protein family UPF0054 BADO_RS04010 PF03471 Transporter associated domain BADO_RS04010 PF00571 CBS domain BADO_RS04010 PF01595 Cyclin M transmembrane N-terminal domain BADO_RS04015 PF01926 50S ribosome-binding GTPase BADO_RS04015 PF07650 KH domain BADO_RS04020 PF00501 AMP-binding enzyme BADO_RS04025 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BADO_RS04025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BADO_RS04030 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BADO_RS04035 PF02233 NAD(P) transhydrogenase beta subunit BADO_RS04045 PF01554 MatE BADO_RS04055 PF00248 Aldo/keto reductase family BADO_RS04070 PF00083 Sugar (and other) transporter BADO_RS04075 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BADO_RS04080 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BADO_RS04095 PF00005 ABC transporter BADO_RS04105 PF17755 UvrA DNA-binding domain BADO_RS04105 PF17760 UvrA interaction domain BADO_RS04105 PF00005 ABC transporter BADO_RS04120 PF14693 Ribosomal protein TL5, C-terminal domain BADO_RS04120 PF01386 Ribosomal L25p family BADO_RS04125 PF01063 Amino-transferase class IV BADO_RS04135 PF01649 Ribosomal protein S20 BADO_RS04140 PF06421 GTP-binding protein LepA C-terminus BADO_RS04140 PF00679 Elongation factor G C-terminus BADO_RS04140 PF00009 Elongation factor Tu GTP binding domain BADO_RS04140 PF03144 Elongation factor Tu domain 2 BADO_RS04145 PF04055 Radical SAM superfamily BADO_RS04150 PF00310 Glutamine amidotransferases class-II BADO_RS04150 PF01493 GXGXG motif BADO_RS04150 PF04898 Glutamate synthase central domain BADO_RS04150 PF01645 Conserved region in glutamate synthase BADO_RS04155 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADO_RS04155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BADO_RS04165 PF00534 Glycosyl transferases group 1 BADO_RS04165 PF13439 Glycosyltransferase Family 4 BADO_RS04170 PF00005 ABC transporter BADO_RS04175 PF08704 tRNA methyltransferase complex GCD14 subunit BADO_RS04190 PF08267 Cobalamin-independent synthase, N-terminal domain BADO_RS04190 PF01717 Cobalamin-independent synthase, Catalytic domain BADO_RS04195 PF02219 Methylenetetrahydrofolate reductase BADO_RS04200 PF08335 GlnD PII-uridylyltransferase BADO_RS04200 PF03710 Glutamate-ammonia ligase adenylyltransferase BADO_RS04205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BADO_RS04205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BADO_RS04210 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BADO_RS04210 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BADO_RS04215 PF01979 Amidohydrolase family BADO_RS04220 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BADO_RS04225 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BADO_RS04230 PF01180 Dihydroorotate dehydrogenase BADO_RS04235 PF00156 Phosphoribosyl transferase domain BADO_RS04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADO_RS04240 PF03466 LysR substrate binding domain BADO_RS04250 PF02687 FtsX-like permease family BADO_RS04250 PF12704 MacB-like periplasmic core domain BADO_RS04250 PF00005 ABC transporter BADO_RS04260 PF03853 YjeF-related protein N-terminus BADO_RS04260 PF01256 Carbohydrate kinase BADO_RS04265 PF02687 FtsX-like permease family BADO_RS04265 PF12704 MacB-like periplasmic core domain BADO_RS04265 PF00005 ABC transporter BADO_RS04290 PF00501 AMP-binding enzyme BADO_RS04300 PF00180 Isocitrate/isopropylmalate dehydrogenase BADO_RS04305 PF00478 IMP dehydrogenase / GMP reductase domain BADO_RS04315 PF00501 AMP-binding enzyme BADO_RS04320 PF01327 Polypeptide deformylase BADO_RS04325 PF00318 Ribosomal protein S2 BADO_RS04330 PF00889 Elongation factor TS BADO_RS04335 PF00696 Amino acid kinase family BADO_RS04340 PF01765 Ribosome recycling factor BADO_RS04350 PF04055 Radical SAM superfamily BADO_RS04355 PF00977 Histidine biosynthesis protein BADO_RS04360 PF01502 Phosphoribosyl-AMP cyclohydrolase BADO_RS04365 PF00425 chorismate binding enzyme BADO_RS04365 PF04715 Anthranilate synthase component I, N terminal region BADO_RS04370 PF00291 Pyridoxal-phosphate dependent enzyme BADO_RS04375 PF00290 Tryptophan synthase alpha chain BADO_RS04380 PF01790 Prolipoprotein diacylglyceryl transferase BADO_RS04385 PF00834 Ribulose-phosphate 3 epimerase family BADO_RS04390 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BADO_RS04395 PF08029 HisG, C-terminal domain BADO_RS04395 PF01634 ATP phosphoribosyltransferase BADO_RS04400 PF01066 CDP-alcohol phosphatidyltransferase BADO_RS04405 PF05949 Bacterial protein of unknown function (DUF881) BADO_RS04410 PF06947 Protein of unknown function (DUF1290) BADO_RS04420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BADO_RS04420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BADO_RS04420 PF03129 Anticodon binding domain BADO_RS04425 PF01066 CDP-alcohol phosphatidyltransferase BADO_RS04430 PF01709 Transcriptional regulator BADO_RS04435 PF02075 Crossover junction endodeoxyribonuclease RuvC BADO_RS04440 PF01330 RuvA N terminal domain BADO_RS04440 PF07499 RuvA, C-terminal domain BADO_RS04445 PF05496 Holliday junction DNA helicase RuvB P-loop domain BADO_RS04445 PF05491 RuvB C-terminal winged helix domain BADO_RS04445 PF17864 RuvB AAA lid domain BADO_RS04455 PF00156 Phosphoribosyl transferase domain BADO_RS04460 PF08442 ATP-grasp domain BADO_RS04460 PF00549 CoA-ligase BADO_RS04465 PF02629 CoA binding domain BADO_RS04465 PF00549 CoA-ligase BADO_RS04475 PF01808 AICARFT/IMPCHase bienzyme BADO_RS04475 PF02142 MGS-like domain BADO_RS04480 PF00230 Major intrinsic protein BADO_RS04485 PF00849 RNA pseudouridylate synthase BADO_RS04485 PF01479 S4 domain BADO_RS04490 PF01926 50S ribosome-binding GTPase BADO_RS04490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BADO_RS04520 PF00271 Helicase conserved C-terminal domain BADO_RS04520 PF00270 DEAD/DEAH box helicase BADO_RS04520 PF08148 DSHCT (NUC185) domain BADO_RS04525 PF13397 RNA polymerase-binding protein BADO_RS04540 PF13411 MerR HTH family regulatory protein BADO_RS04545 PF00498 FHA domain BADO_RS04580 PF02673 Bacitracin resistance protein BacA BADO_RS04590 PF01556 DnaJ C terminal domain BADO_RS04590 PF00684 DnaJ central domain BADO_RS04590 PF00226 DnaJ domain BADO_RS04595 PF01628 HrcA protein C terminal domain BADO_RS04600 PF02779 Transketolase, pyrimidine binding domain BADO_RS04600 PF02780 Transketolase, C-terminal domain BADO_RS04600 PF00456 Transketolase, thiamine diphosphate binding domain BADO_RS04605 PF00923 Transaldolase/Fructose-6-phosphate aldolase BADO_RS04610 PF00155 Aminotransferase class I and II BADO_RS04620 PF03840 Preprotein translocase SecG subunit BADO_RS04625 PF00121 Triosephosphate isomerase BADO_RS04630 PF00162 Phosphoglycerate kinase BADO_RS04635 PF10298 WhiA N-terminal LAGLIDADG-like domain BADO_RS04635 PF14527 WhiA LAGLIDADG-like domain BADO_RS04635 PF02650 WhiA C-terminal HTH domain BADO_RS04640 PF03668 P-loop ATPase protein family BADO_RS04645 PF08501 Shikimate dehydrogenase substrate binding domain BADO_RS04645 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BADO_RS04650 PF08459 UvrC Helix-hairpin-helix N-terminal BADO_RS04650 PF01541 GIY-YIG catalytic domain BADO_RS04650 PF02151 UvrB/uvrC motif BADO_RS04655 PF00005 ABC transporter BADO_RS04655 PF17755 UvrA DNA-binding domain BADO_RS04655 PF17760 UvrA interaction domain BADO_RS04710 PF00005 ABC transporter BADO_RS04710 PF16326 ABC transporter C-terminal domain BADO_RS04715 PF00005 ABC transporter BADO_RS04715 PF12848 ABC transporter BADO_RS04715 PF16326 ABC transporter C-terminal domain BADO_RS04725 PF01717 Cobalamin-independent synthase, Catalytic domain BADO_RS04740 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BADO_RS04750 PF00814 Glycoprotease family BADO_RS04755 PF13508 Acetyltransferase (GNAT) domain BADO_RS04755 PF00583 Acetyltransferase (GNAT) family BADO_RS04760 PF00814 Glycoprotease family BADO_RS04765 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BADO_RS04775 PF03772 Competence protein BADO_RS04775 PF13567 Domain of unknown function (DUF4131) BADO_RS04775 PF00753 Metallo-beta-lactamase superfamily BADO_RS04780 PF10531 SLBB domain BADO_RS04785 PF08264 Anticodon-binding domain of tRNA BADO_RS04785 PF13603 Leucyl-tRNA synthetase, Domain 2 BADO_RS04785 PF09334 tRNA synthetases class I (M) BADO_RS04790 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADO_RS04795 PF01544 CorA-like Mg2+ transporter protein BADO_RS04800 PF00300 Histidine phosphatase superfamily (branch 1) BADO_RS04815 PF00300 Histidine phosphatase superfamily (branch 1) BADO_RS04825 PF00132 Bacterial transferase hexapeptide (six repeats) BADO_RS04825 PF12804 MobA-like NTP transferase domain BADO_RS04835 PF00248 Aldo/keto reductase family BADO_RS04890 PF02687 FtsX-like permease family BADO_RS04890 PF12704 MacB-like periplasmic core domain BADO_RS04900 PF00005 ABC transporter BADO_RS04920 PF01022 Bacterial regulatory protein, arsR family BADO_RS04925 PF00583 Acetyltransferase (GNAT) family BADO_RS04925 PF14268 YoaP-like BADO_RS04930 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BADO_RS04930 PF14572 Phosphoribosyl synthetase-associated domain BADO_RS04935 PF01467 Cytidylyltransferase-like BADO_RS04945 PF00171 Aldehyde dehydrogenase family BADO_RS04950 PF00464 Serine hydroxymethyltransferase BADO_RS04955 PF00291 Pyridoxal-phosphate dependent enzyme BADO_RS04955 PF14821 Threonine synthase N terminus BADO_RS04970 PF13784 Fic/DOC family N-terminal BADO_RS04970 PF02661 Fic/DOC family BADO_RS04990 PF00578 AhpC/TSA family BADO_RS04995 PF01119 DNA mismatch repair protein, C-terminal domain BADO_RS04995 PF08676 MutL C terminal dimerisation domain BADO_RS05015 PF00145 C-5 cytosine-specific DNA methylase BADO_RS05020 PF05970 PIF1-like helicase BADO_RS05020 PF14493 Helix-turn-helix domain BADO_RS05040 PF00392 Bacterial regulatory proteins, gntR family BADO_RS05050 PF13419 Haloacid dehalogenase-like hydrolase BADO_RS05055 PF02463 RecF/RecN/SMC N terminal domain BADO_RS05060 PF01513 ATP-NAD kinase BADO_RS05065 PF02386 Cation transport protein BADO_RS05070 PF02080 TrkA-C domain BADO_RS05070 PF02254 TrkA-N domain BADO_RS05075 PF01479 S4 domain BADO_RS05075 PF01728 FtsJ-like methyltransferase BADO_RS05090 PF01479 S4 domain BADO_RS05090 PF00579 tRNA synthetases class I (W and Y) BADO_RS05110 PF00206 Lyase BADO_RS05110 PF14698 Argininosuccinate lyase C-terminal BADO_RS05115 PF00764 Arginosuccinate synthase BADO_RS05120 PF02863 Arginine repressor, C-terminal domain BADO_RS05120 PF01316 Arginine repressor, DNA binding domain BADO_RS05125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BADO_RS05125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BADO_RS05130 PF00202 Aminotransferase class-III BADO_RS05135 PF00696 Amino acid kinase family BADO_RS05140 PF01960 ArgJ family BADO_RS05145 PF02774 Semialdehyde dehydrogenase, dimerisation domain BADO_RS05145 PF01118 Semialdehyde dehydrogenase, NAD binding domain BADO_RS05155 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BADO_RS05155 PF01588 Putative tRNA binding domain BADO_RS05155 PF03147 Ferredoxin-fold anticodon binding domain BADO_RS05155 PF03484 tRNA synthetase B5 domain BADO_RS05155 PF03483 B3/4 domain BADO_RS05160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BADO_RS05160 PF01409 tRNA synthetases class II core domain (F) BADO_RS05165 PF00588 SpoU rRNA Methylase family BADO_RS05165 PF08032 RNA 2'-O ribose methyltransferase substrate binding BADO_RS05175 PF00005 ABC transporter BADO_RS05180 PF03641 Possible lysine decarboxylase BADO_RS05190 PF03951 Glutamine synthetase, beta-Grasp domain BADO_RS05190 PF00120 Glutamine synthetase, catalytic domain BADO_RS05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADO_RS05200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BADO_RS05210 PF07687 Peptidase dimerisation domain BADO_RS05210 PF01546 Peptidase family M20/M25/M40 BADO_RS05220 PF00005 ABC transporter BADO_RS05225 PF09819 ABC-type cobalt transport system, permease component BADO_RS05230 PF01883 Iron-sulfur cluster assembly protein BADO_RS05230 PF10609 NUBPL iron-transfer P-loop NTPase BADO_RS05235 PF00533 BRCA1 C Terminus (BRCT) domain BADO_RS05235 PF01653 NAD-dependent DNA ligase adenylation domain BADO_RS05235 PF03120 NAD-dependent DNA ligase OB-fold domain BADO_RS05235 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BADO_RS05235 PF12826 Helix-hairpin-helix motif BADO_RS05255 PF00005 ABC transporter BADO_RS05260 PF00155 Aminotransferase class I and II BADO_RS05265 PF00480 ROK family BADO_RS05275 PF03070 TENA/THI-4/PQQC family BADO_RS05285 PF02361 Cobalt transport protein BADO_RS05285 PF00005 ABC transporter BADO_RS05295 PF00176 SNF2 family N-terminal domain BADO_RS05295 PF04434 SWIM zinc finger BADO_RS05295 PF00271 Helicase conserved C-terminal domain BADO_RS05300 PF03051 Peptidase C1-like family BADO_RS05310 PF07885 Ion channel BADO_RS05315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BADO_RS05320 PF02580 D-Tyr-tRNA(Tyr) deacylase BADO_RS05335 PF04343 Protein of unknown function, DUF488 BADO_RS05340 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BADO_RS05340 PF08463 EcoEI R protein C-terminal BADO_RS05340 PF00271 Helicase conserved C-terminal domain BADO_RS05340 PF04851 Type III restriction enzyme, res subunit BADO_RS05350 PF12161 HsdM N-terminal domain BADO_RS05350 PF02384 N-6 DNA Methylase BADO_RS05360 PF00176 SNF2 family N-terminal domain BADO_RS05360 PF04434 SWIM zinc finger BADO_RS05360 PF00271 Helicase conserved C-terminal domain BADO_RS05370 PF00795 Carbon-nitrogen hydrolase BADO_RS05400 PF05698 Bacterial trigger factor protein (TF) C-terminus BADO_RS05400 PF05697 Bacterial trigger factor protein (TF) BADO_RS05400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADO_RS05415 PF04055 Radical SAM superfamily BADO_RS05420 PF01228 Glycine radical BADO_RS05420 PF02901 Pyruvate formate lyase-like BADO_RS05430 PF00795 Carbon-nitrogen hydrolase BADO_RS05430 PF02540 NAD synthase BADO_RS05435 PF07687 Peptidase dimerisation domain BADO_RS05435 PF01546 Peptidase family M20/M25/M40 BADO_RS05445 PF03180 NLPA lipoprotein BADO_RS05450 PF00005 ABC transporter BADO_RS05450 PF09383 NIL domain BADO_RS05455 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS05465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BADO_RS05470 PF02824 TGS domain BADO_RS05470 PF04607 Region found in RelA / SpoT proteins BADO_RS05470 PF13291 ACT domain BADO_RS05475 PF00692 dUTPase BADO_RS05495 PF03989 DNA gyrase C-terminal domain, beta-propeller BADO_RS05495 PF00521 DNA gyrase/topoisomerase IV, subunit A BADO_RS05500 PF00270 DEAD/DEAH box helicase BADO_RS05500 PF00271 Helicase conserved C-terminal domain BADO_RS05500 PF08494 DEAD/H associated BADO_RS05510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS05510 PF00986 DNA gyrase B subunit, carboxyl terminus BADO_RS05510 PF01751 Toprim domain BADO_RS05510 PF00204 DNA gyrase B BADO_RS05515 PF00140 Sigma-70 factor, region 1.2 BADO_RS05515 PF04539 Sigma-70 region 3 BADO_RS05515 PF04542 Sigma-70 region 2 BADO_RS05515 PF04545 Sigma-70, region 4 BADO_RS05525 PF00348 Polyprenyl synthetase BADO_RS05530 PF00069 Protein kinase domain BADO_RS05530 PF03793 PASTA domain BADO_RS05550 PF13276 HTH-like domain BADO_RS05550 PF00665 Integrase core domain BADO_RS05550 PF13333 Integrase core domain BADO_RS05555 PF00591 Glycosyl transferase family, a/b domain BADO_RS05555 PF02885 Glycosyl transferase family, helical bundle domain BADO_RS05560 PF01043 SecA preprotein cross-linking domain BADO_RS05560 PF07516 SecA Wing and Scaffold domain BADO_RS05560 PF07517 SecA DEAD-like domain BADO_RS05560 PF02810 SEC-C motif BADO_RS05565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BADO_RS05565 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BADO_RS05570 PF02631 RecX family BADO_RS05575 PF00154 recA bacterial DNA recombination protein BADO_RS05590 PF00994 Probable molybdopterin binding domain BADO_RS05590 PF18146 Damage-inducible protein CinA KH domain BADO_RS05590 PF02464 Competence-damaged protein BADO_RS05595 PF01066 CDP-alcohol phosphatidyltransferase BADO_RS05600 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BADO_RS05600 PF17854 FtsK alpha domain BADO_RS05600 PF01580 FtsK/SpoIIIE family BADO_RS05600 PF09397 Ftsk gamma domain BADO_RS05610 PF00919 Uncharacterized protein family UPF0004 BADO_RS05610 PF04055 Radical SAM superfamily BADO_RS05615 PF04607 Region found in RelA / SpoT proteins BADO_RS05625 PF01027 Inhibitor of apoptosis-promoting Bax1 BADO_RS05640 PF00196 Bacterial regulatory proteins, luxR family BADO_RS05640 PF00072 Response regulator receiver domain BADO_RS05650 PF00072 Response regulator receiver domain BADO_RS05650 PF00196 Bacterial regulatory proteins, luxR family BADO_RS05655 PF07730 Histidine kinase BADO_RS05660 PF00005 ABC transporter BADO_RS05685 PF14602 Hexapeptide repeat of succinyl-transferase BADO_RS05685 PF12464 Maltose acetyltransferase BADO_RS05690 PF00512 His Kinase A (phospho-acceptor) domain BADO_RS05690 PF07495 Y_Y_Y domain BADO_RS05690 PF12833 Helix-turn-helix domain BADO_RS05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADO_RS05690 PF07494 Two component regulator propeller BADO_RS05690 PF00072 Response regulator receiver domain BADO_RS05705 PF00356 Bacterial regulatory proteins, lacI family BADO_RS05710 PF00694 Aconitase C-terminal domain BADO_RS05710 PF00330 Aconitase family (aconitate hydratase) BADO_RS05725 PF05958 tRNA (Uracil-5-)-methyltransferase BADO_RS05740 PF03372 Endonuclease/Exonuclease/phosphatase family BADO_RS05745 PF00005 ABC transporter BADO_RS05745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADO_RS05750 PF12911 N-terminal TM domain of oligopeptide transport permease C BADO_RS05750 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS05755 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS05760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADO_RS05765 PF00589 Phage integrase family BADO_RS05765 PF02899 Phage integrase, N-terminal SAM-like domain BADO_RS05770 PF12704 MacB-like periplasmic core domain BADO_RS05770 PF02687 FtsX-like permease family BADO_RS05770 PF00005 ABC transporter BADO_RS05775 PF02687 FtsX-like permease family BADO_RS05775 PF12704 MacB-like periplasmic core domain BADO_RS05775 PF00005 ABC transporter BADO_RS05785 PF02153 Prephenate dehydrogenase BADO_RS05790 PF00800 Prephenate dehydratase BADO_RS05790 PF01817 Chorismate mutase type II BADO_RS05790 PF01842 ACT domain BADO_RS05800 PF00009 Elongation factor Tu GTP binding domain BADO_RS05800 PF03144 Elongation factor Tu domain 2 BADO_RS05800 PF14492 Elongation Factor G, domain II BADO_RS05800 PF00679 Elongation factor G C-terminus BADO_RS05805 PF07690 Major Facilitator Superfamily BADO_RS05815 PF13614 AAA domain BADO_RS05820 PF02899 Phage integrase, N-terminal SAM-like domain BADO_RS05820 PF00589 Phage integrase family BADO_RS05825 PF00453 Ribosomal protein L20 BADO_RS05830 PF01632 Ribosomal protein L35 BADO_RS05835 PF00707 Translation initiation factor IF-3, C-terminal domain BADO_RS05835 PF05198 Translation initiation factor IF-3, N-terminal domain BADO_RS05840 PF13537 Glutamine amidotransferase domain BADO_RS05840 PF00733 Asparagine synthase BADO_RS05850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BADO_RS05850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BADO_RS05855 PF04073 Aminoacyl-tRNA editing domain BADO_RS05860 PF02401 LytB protein BADO_RS05865 PF01263 Aldose 1-epimerase BADO_RS05875 PF04542 Sigma-70 region 2 BADO_RS05875 PF08281 Sigma-70, region 4 BADO_RS05880 PF02875 Mur ligase family, glutamate ligase domain BADO_RS05880 PF08245 Mur ligase middle domain BADO_RS05890 PF01177 Asp/Glu/Hydantoin racemase BADO_RS05895 PF02875 Mur ligase family, glutamate ligase domain BADO_RS05895 PF08245 Mur ligase middle domain BADO_RS05900 PF05195 Aminopeptidase P, N-terminal domain BADO_RS05900 PF00557 Metallopeptidase family M24 BADO_RS05905 PF00293 NUDIX domain BADO_RS05910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADO_RS05910 PF00005 ABC transporter BADO_RS05915 PF12911 N-terminal TM domain of oligopeptide transport permease C BADO_RS05915 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS05920 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS05925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADO_RS05930 PF01325 Iron dependent repressor, N-terminal DNA binding domain BADO_RS05930 PF00480 ROK family BADO_RS05950 PF08245 Mur ligase middle domain BADO_RS05950 PF02875 Mur ligase family, glutamate ligase domain BADO_RS05950 PF01225 Mur ligase family, catalytic domain BADO_RS05955 PF04101 Glycosyltransferase family 28 C-terminal domain BADO_RS05955 PF03033 Glycosyltransferase family 28 N-terminal domain BADO_RS05960 PF01098 Cell cycle protein BADO_RS05965 PF02875 Mur ligase family, glutamate ligase domain BADO_RS05965 PF08245 Mur ligase middle domain BADO_RS05970 PF00953 Glycosyl transferase family 4 BADO_RS05975 PF02875 Mur ligase family, glutamate ligase domain BADO_RS05975 PF08245 Mur ligase middle domain BADO_RS05975 PF01225 Mur ligase family, catalytic domain BADO_RS05985 PF00905 Penicillin binding protein transpeptidase domain BADO_RS05985 PF03717 Penicillin-binding Protein dimerisation domain BADO_RS05995 PF01795 MraW methylase family BADO_RS06000 PF02381 MraZ protein, putative antitoxin-like BADO_RS06015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BADO_RS06015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BADO_RS06020 PF03477 ATP cone domain BADO_RS06030 PF00717 Peptidase S24-like BADO_RS06030 PF01726 LexA DNA binding domain BADO_RS06035 PF16916 Dimerisation domain of Zinc Transporter BADO_RS06035 PF01545 Cation efflux family BADO_RS06040 PF00056 lactate/malate dehydrogenase, NAD binding domain BADO_RS06040 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BADO_RS06045 PF16360 GTP-binding GTPase Middle Region BADO_RS06045 PF01926 50S ribosome-binding GTPase BADO_RS06045 PF13167 GTP-binding GTPase N-terminal BADO_RS06050 PF05175 Methyltransferase small domain BADO_RS06055 PF11898 Domain of unknown function (DUF3418) BADO_RS06055 PF04408 Helicase associated domain (HA2) BADO_RS06055 PF00271 Helicase conserved C-terminal domain BADO_RS06055 PF00270 DEAD/DEAH box helicase BADO_RS06055 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BADO_RS06070 PF00005 ABC transporter BADO_RS06080 PF00486 Transcriptional regulatory protein, C terminal BADO_RS06080 PF00072 Response regulator receiver domain BADO_RS06090 PF07690 Major Facilitator Superfamily BADO_RS06105 PF03951 Glutamine synthetase, beta-Grasp domain BADO_RS06105 PF00120 Glutamine synthetase, catalytic domain BADO_RS06110 PF00977 Histidine biosynthesis protein BADO_RS06115 PF00117 Glutamine amidotransferase class-I BADO_RS06125 PF00475 Imidazoleglycerol-phosphate dehydratase BADO_RS06130 PF00155 Aminotransferase class I and II BADO_RS06135 PF00815 Histidinol dehydrogenase BADO_RS06140 PF07733 Bacterial DNA polymerase III alpha NTPase domain BADO_RS06140 PF02811 PHP domain BADO_RS06140 PF14579 Helix-hairpin-helix motif BADO_RS06140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BADO_RS06145 PF00849 RNA pseudouridylate synthase BADO_RS06150 PF01252 Signal peptidase (SPase) II BADO_RS06165 PF04472 Cell division protein SepF BADO_RS06170 PF00091 Tubulin/FtsZ family, GTPase domain BADO_RS06170 PF12327 FtsZ family, C-terminal domain BADO_RS06175 PF01207 Dihydrouridine synthase (Dus) BADO_RS06180 PF03129 Anticodon binding domain BADO_RS06180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BADO_RS06200 PF06750 Bacterial Peptidase A24 N-terminal domain BADO_RS06200 PF01478 Type IV leader peptidase family BADO_RS06210 PF00482 Type II secretion system (T2SS), protein F BADO_RS06215 PF00114 Pilin (bacterial filament) BADO_RS06215 PF07963 Prokaryotic N-terminal methylation motif BADO_RS06230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BADO_RS06230 PF00437 Type II/IV secretion system protein BADO_RS06235 PF00437 Type II/IV secretion system protein BADO_RS06260 PF00248 Aldo/keto reductase family BADO_RS06305 PF00589 Phage integrase family BADO_RS06305 PF12167 Arm DNA-binding domain BADO_RS06495 PF00436 Single-strand binding protein family BADO_RS06550 PF02110 Hydroxyethylthiazole kinase family BADO_RS06555 PF13667 ThiC-associated domain BADO_RS06555 PF01964 Radical SAM ThiC family BADO_RS06555 PF02581 Thiamine monophosphate synthase BADO_RS06560 PF08543 Phosphomethylpyrimidine kinase BADO_RS06560 PF02581 Thiamine monophosphate synthase BADO_RS06565 PF01910 Thiamine-binding protein BADO_RS06570 PF00356 Bacterial regulatory proteins, lacI family BADO_RS06575 PF01306 LacY proton/sugar symporter BADO_RS06580 PF08244 Glycosyl hydrolases family 32 C terminal BADO_RS06580 PF00251 Glycosyl hydrolases family 32 N-terminal domain BADO_RS06585 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS06660 PF00072 Response regulator receiver domain BADO_RS06660 PF04397 LytTr DNA-binding domain BADO_RS06675 PF01156 Inosine-uridine preferring nucleoside hydrolase BADO_RS06685 PF01255 Putative undecaprenyl diphosphate synthase BADO_RS06690 PF02565 Recombination protein O C terminal BADO_RS06690 PF11967 Recombination protein O N terminal BADO_RS06700 PF04551 GcpE protein BADO_RS06705 PF13288 DXP reductoisomerase C-terminal domain BADO_RS06705 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BADO_RS06705 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BADO_RS06720 PF11253 Protein of unknown function (DUF3052) BADO_RS06725 PF05362 Lon protease (S16) C-terminal proteolytic domain BADO_RS06725 PF13180 PDZ domain BADO_RS06735 PF13361 UvrD-like helicase C-terminal domain BADO_RS06735 PF00570 HRDC domain BADO_RS06735 PF00580 UvrD/REP helicase N-terminal domain BADO_RS06750 PF02811 PHP domain BADO_RS06760 PF01678 Diaminopimelate epimerase BADO_RS06765 PF01177 Asp/Glu/Hydantoin racemase BADO_RS06775 PF00155 Aminotransferase class I and II BADO_RS06785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADO_RS06790 PF01112 Asparaginase BADO_RS06795 PF01867 CRISPR associated protein Cas1 BADO_RS06825 PF18395 Cas3 C-terminal domain BADO_RS06825 PF00270 DEAD/DEAH box helicase BADO_RS06825 PF18019 HD domain BADO_RS06830 PF08264 Anticodon-binding domain of tRNA BADO_RS06830 PF00133 tRNA synthetases class I (I, L, M and V) BADO_RS06835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADO_RS06840 PF00356 Bacterial regulatory proteins, lacI family BADO_RS06850 PF00664 ABC transporter transmembrane region BADO_RS06850 PF00005 ABC transporter BADO_RS06855 PF00005 ABC transporter BADO_RS06855 PF00664 ABC transporter transmembrane region BADO_RS06865 PF01915 Glycosyl hydrolase family 3 C-terminal domain BADO_RS06865 PF00933 Glycosyl hydrolase family 3 N terminal domain BADO_RS06865 PF14310 Fibronectin type III-like domain BADO_RS06875 PF02595 Glycerate kinase family BADO_RS06880 PF07690 Major Facilitator Superfamily BADO_RS06885 PF01915 Glycosyl hydrolase family 3 C-terminal domain BADO_RS06885 PF00933 Glycosyl hydrolase family 3 N terminal domain BADO_RS06885 PF14310 Fibronectin type III-like domain BADO_RS06905 PF00440 Bacterial regulatory proteins, tetR family BADO_RS06930 PF00872 Transposase, Mutator family BADO_RS06950 PF16363 GDP-mannose 4,6 dehydratase BADO_RS06955 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BADO_RS06960 PF00483 Nucleotidyl transferase BADO_RS06975 PF13274 Protein of unknown function (DUF4065) BADO_RS07000 PF00483 Nucleotidyl transferase BADO_RS07030 PF13614 AAA domain BADO_RS07045 PF02397 Bacterial sugar transferase BADO_RS07065 PF00085 Thioredoxin BADO_RS07080 PF09297 NADH pyrophosphatase zinc ribbon domain BADO_RS07080 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BADO_RS07080 PF00293 NUDIX domain BADO_RS07085 PF17969 L,D-transpeptidase C-terminal domain BADO_RS07085 PF03734 L,D-transpeptidase catalytic domain BADO_RS07090 PF01597 Glycine cleavage H-protein BADO_RS07100 PF00326 Prolyl oligopeptidase family BADO_RS07100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BADO_RS07105 PF00180 Isocitrate/isopropylmalate dehydrogenase BADO_RS07115 PF03099 Biotin/lipoate A/B protein ligase family BADO_RS07115 PF10437 Bacterial lipoate protein ligase C-terminus BADO_RS07120 PF00027 Cyclic nucleotide-binding domain BADO_RS07120 PF13545 Crp-like helix-turn-helix domain BADO_RS07125 PF00912 Transglycosylase BADO_RS07125 PF00905 Penicillin binding protein transpeptidase domain BADO_RS07130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BADO_RS07135 PF01180 Dihydroorotate dehydrogenase BADO_RS07140 PF08220 DeoR-like helix-turn-helix domain BADO_RS07140 PF00455 DeoR C terminal sensor domain BADO_RS07145 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BADO_RS07145 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BADO_RS07150 PF10509 Galactokinase galactose-binding signature BADO_RS07150 PF08544 GHMP kinases C terminal BADO_RS07150 PF00288 GHMP kinases N terminal domain BADO_RS07160 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS07165 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS07175 PF00356 Bacterial regulatory proteins, lacI family BADO_RS07180 PF00251 Glycosyl hydrolases family 32 N-terminal domain BADO_RS07180 PF08244 Glycosyl hydrolases family 32 C terminal BADO_RS07190 PF05167 Uncharacterised ACR (DUF711) BADO_RS07195 PF00588 SpoU rRNA Methylase family BADO_RS07200 PF10576 Iron-sulfur binding domain of endonuclease III BADO_RS07200 PF00633 Helix-hairpin-helix motif BADO_RS07200 PF00730 HhH-GPD superfamily base excision DNA repair protein BADO_RS07210 PF04561 RNA polymerase Rpb2, domain 2 BADO_RS07210 PF00562 RNA polymerase Rpb2, domain 6 BADO_RS07210 PF04563 RNA polymerase beta subunit BADO_RS07210 PF04565 RNA polymerase Rpb2, domain 3 BADO_RS07210 PF04560 RNA polymerase Rpb2, domain 7 BADO_RS07210 PF10385 RNA polymerase beta subunit external 1 domain BADO_RS07215 PF04983 RNA polymerase Rpb1, domain 3 BADO_RS07215 PF04998 RNA polymerase Rpb1, domain 5 BADO_RS07215 PF04997 RNA polymerase Rpb1, domain 1 BADO_RS07215 PF00623 RNA polymerase Rpb1, domain 2 BADO_RS07215 PF05000 RNA polymerase Rpb1, domain 4 BADO_RS07255 PF07726 ATPase family associated with various cellular activities (AAA) BADO_RS07255 PF17863 AAA lid domain BADO_RS07265 PF03793 PASTA domain BADO_RS07265 PF00069 Protein kinase domain BADO_RS07275 PF00580 UvrD/REP helicase N-terminal domain BADO_RS07275 PF13361 UvrD-like helicase C-terminal domain BADO_RS07290 PF05173 Dihydrodipicolinate reductase, C-terminus BADO_RS07290 PF01113 Dihydrodipicolinate reductase, N-terminus BADO_RS07295 PF02583 Metal-sensitive transcriptional repressor BADO_RS07300 PF04945 YHS domain BADO_RS07305 PF01979 Amidohydrolase family BADO_RS07315 PF07690 Major Facilitator Superfamily BADO_RS07320 PF00701 Dihydrodipicolinate synthetase family BADO_RS07325 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BADO_RS07325 PF17770 Ribonuclease J C-terminal domain BADO_RS07325 PF12706 Beta-lactamase superfamily domain BADO_RS07330 PF11838 ERAP1-like C-terminal domain BADO_RS07330 PF01433 Peptidase family M1 domain BADO_RS07335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BADO_RS07335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BADO_RS07335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BADO_RS07335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BADO_RS07340 PF01327 Polypeptide deformylase BADO_RS07345 PF13520 Amino acid permease BADO_RS07350 PF00282 Pyridoxal-dependent decarboxylase conserved domain BADO_RS07385 PF00881 Nitroreductase family BADO_RS07395 PF00300 Histidine phosphatase superfamily (branch 1) BADO_RS07405 PF00356 Bacterial regulatory proteins, lacI family BADO_RS07410 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS07415 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS07425 PF00128 Alpha amylase, catalytic domain BADO_RS07430 PF02446 4-alpha-glucanotransferase BADO_RS07435 PF00128 Alpha amylase, catalytic domain BADO_RS07435 PF16657 Maltogenic Amylase, C-terminal domain BADO_RS07445 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS07450 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS07455 PF00128 Alpha amylase, catalytic domain BADO_RS07455 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BADO_RS07455 PF03714 Bacterial pullanase-associated domain BADO_RS07460 PF13419 Haloacid dehalogenase-like hydrolase BADO_RS07470 PF00356 Bacterial regulatory proteins, lacI family BADO_RS07480 PF18002 T6 antigen Ig like domain BADO_RS07480 PF17802 Prealbumin-like fold domain BADO_RS07480 PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain BADO_RS07480 PF00746 LPXTG cell wall anchor motif BADO_RS07485 PF17802 Prealbumin-like fold domain BADO_RS07485 PF05737 Collagen binding domain BADO_RS07485 PF05738 Cna protein B-type domain BADO_RS07495 PF01925 Sulfite exporter TauE/SafE BADO_RS07500 PF00245 Alkaline phosphatase BADO_RS07505 PF00012 Hsp70 protein BADO_RS07510 PF01025 GrpE BADO_RS07515 PF00684 DnaJ central domain BADO_RS07515 PF00226 DnaJ domain BADO_RS07515 PF01556 DnaJ C terminal domain BADO_RS07520 PF13411 MerR HTH family regulatory protein BADO_RS07530 PF13419 Haloacid dehalogenase-like hydrolase BADO_RS07555 PF13173 AAA domain BADO_RS07555 PF13635 Domain of unknown function (DUF4143) BADO_RS07565 PF09335 SNARE associated Golgi protein BADO_RS07570 PF07859 alpha/beta hydrolase fold BADO_RS07570 PF00331 Glycosyl hydrolase family 10 BADO_RS07575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BADO_RS07590 PF09334 tRNA synthetases class I (M) BADO_RS07590 PF08264 Anticodon-binding domain of tRNA BADO_RS07600 PF00083 Sugar (and other) transporter BADO_RS07610 PF00664 ABC transporter transmembrane region BADO_RS07610 PF00005 ABC transporter BADO_RS07615 PF00664 ABC transporter transmembrane region BADO_RS07615 PF00005 ABC transporter BADO_RS07620 PF07944 Beta-L-arabinofuranosidase, GH127 BADO_RS07635 PF00356 Bacterial regulatory proteins, lacI family BADO_RS07640 PF02018 Carbohydrate binding domain BADO_RS07640 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BADO_RS07645 PF01026 TatD related DNase BADO_RS07650 PF02705 K+ potassium transporter BADO_RS07665 PF09383 NIL domain BADO_RS07665 PF00005 ABC transporter BADO_RS07735 PF00145 C-5 cytosine-specific DNA methylase BADO_RS07775 PF00872 Transposase, Mutator family BADO_RS07795 PF08239 Bacterial SH3 domain BADO_RS07795 PF01183 Glycosyl hydrolases family 25 BADO_RS07800 PF00535 Glycosyl transferase family 2 BADO_RS07815 PF01501 Glycosyl transferase family 8 BADO_RS07825 PF08486 Stage II sporulation protein BADO_RS07825 PF04122 Putative cell wall binding repeat 2 BADO_RS07850 PF00005 ABC transporter BADO_RS07860 PF01501 Glycosyl transferase family 8 BADO_RS07865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BADO_RS07865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BADO_RS07870 PF00884 Sulfatase BADO_RS07880 PF16363 GDP-mannose 4,6 dehydratase BADO_RS07890 PF00356 Bacterial regulatory proteins, lacI family BADO_RS07895 PF01156 Inosine-uridine preferring nucleoside hydrolase BADO_RS07900 PF07690 Major Facilitator Superfamily BADO_RS07905 PF00294 pfkB family carbohydrate kinase BADO_RS07910 PF14572 Phosphoribosyl synthetase-associated domain BADO_RS07910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BADO_RS07915 PF01250 Ribosomal protein S6 BADO_RS07920 PF00436 Single-strand binding protein family BADO_RS07925 PF01084 Ribosomal protein S18 BADO_RS07930 PF03948 Ribosomal protein L9, C-terminal domain BADO_RS07930 PF01281 Ribosomal protein L9, N-terminal domain BADO_RS07945 PF00230 Major intrinsic protein BADO_RS07955 PF00749 tRNA synthetases class I (E and Q), catalytic domain BADO_RS07965 PF01168 Alanine racemase, N-terminal domain BADO_RS07990 PF01557 Fumarylacetoacetate (FAA) hydrolase family BADO_RS07995 PF17871 AAA lid domain BADO_RS07995 PF00004 ATPase family associated with various cellular activities (AAA) BADO_RS07995 PF07724 AAA domain (Cdc48 subfamily) BADO_RS07995 PF02861 Clp amino terminal domain, pathogenicity island component BADO_RS07995 PF10431 C-terminal, D2-small domain, of ClpB protein BADO_RS08005 PF02646 RmuC family BADO_RS08020 PF02686 Glu-tRNAGln amidotransferase C subunit BADO_RS08025 PF01425 Amidase BADO_RS08030 PF02934 GatB/GatE catalytic domain BADO_RS08030 PF02637 GatB domain BADO_RS08040 PF10611 Protein of unknown function (DUF2469) BADO_RS08045 PF01593 Flavin containing amine oxidoreductase BADO_RS08050 PF07498 Rho termination factor, N-terminal domain BADO_RS08050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BADO_RS08050 PF07497 Rho termination factor, RNA-binding domain BADO_RS08055 PF01037 Lrp/AsnC ligand binding domain BADO_RS08060 PF01817 Chorismate mutase type II BADO_RS08060 PF02153 Prephenate dehydrogenase BADO_RS08070 PF00133 tRNA synthetases class I (I, L, M and V) BADO_RS08070 PF08264 Anticodon-binding domain of tRNA BADO_RS08080 PF00633 Helix-hairpin-helix motif BADO_RS08080 PF10576 Iron-sulfur binding domain of endonuclease III BADO_RS08080 PF00730 HhH-GPD superfamily base excision DNA repair protein BADO_RS08085 PF00486 Transcriptional regulatory protein, C terminal BADO_RS08095 PF02659 Putative manganese efflux pump BADO_RS08100 PF00719 Inorganic pyrophosphatase BADO_RS08105 PF11896 Domain of unknown function (DUF3416) BADO_RS08105 PF00128 Alpha amylase, catalytic domain BADO_RS08110 PF00589 Phage integrase family BADO_RS08110 PF02899 Phage integrase, N-terminal SAM-like domain BADO_RS08215 PF04204 Homoserine O-succinyltransferase BADO_RS08220 PF00119 ATP synthase A chain BADO_RS08225 PF00137 ATP synthase subunit C BADO_RS08230 PF00430 ATP synthase B/B' CF(0) BADO_RS08235 PF00213 ATP synthase delta (OSCP) subunit BADO_RS08240 PF02874 ATP synthase alpha/beta family, beta-barrel domain BADO_RS08240 PF00306 ATP synthase alpha/beta chain, C terminal domain BADO_RS08240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BADO_RS08245 PF00231 ATP synthase BADO_RS08250 PF02874 ATP synthase alpha/beta family, beta-barrel domain BADO_RS08250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BADO_RS08255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BADO_RS08260 PF01939 Endonuclease NucS BADO_RS08265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADO_RS08290 PF01042 Endoribonuclease L-PSP BADO_RS08295 PF00324 Amino acid permease BADO_RS08300 PF03485 Arginyl tRNA synthetase N terminal domain BADO_RS08300 PF00750 tRNA synthetases class I (R) BADO_RS08300 PF05746 DALR anticodon binding domain BADO_RS08305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BADO_RS08305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BADO_RS08310 PF00742 Homoserine dehydrogenase BADO_RS08310 PF01842 ACT domain BADO_RS08310 PF03447 Homoserine dehydrogenase, NAD binding domain BADO_RS08315 PF00288 GHMP kinases N terminal domain BADO_RS08315 PF08544 GHMP kinases C terminal BADO_RS08320 PF00293 NUDIX domain BADO_RS08320 PF02545 Maf-like protein BADO_RS08325 PF00356 Bacterial regulatory proteins, lacI family BADO_RS08335 PF00596 Class II Aldolase and Adducin N-terminal domain BADO_RS08340 PF02610 L-arabinose isomerase BADO_RS08340 PF11762 L-arabinose isomerase C-terminal domain BADO_RS08345 PF00501 AMP-binding enzyme BADO_RS08350 PF00005 ABC transporter BADO_RS08350 PF00664 ABC transporter transmembrane region BADO_RS08355 PF01680 SOR/SNZ family BADO_RS08360 PF01174 SNO glutamine amidotransferase family BADO_RS08370 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS08375 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS08380 PF08532 Beta-galactosidase trimerisation domain BADO_RS08380 PF02449 Beta-galactosidase BADO_RS08385 PF00356 Bacterial regulatory proteins, lacI family BADO_RS08395 PF00248 Aldo/keto reductase family BADO_RS08400 PF01566 Natural resistance-associated macrophage protein BADO_RS08400 PF03358 NADPH-dependent FMN reductase BADO_RS08405 PF07690 Major Facilitator Superfamily BADO_RS08415 PF02661 Fic/DOC family BADO_RS08415 PF13784 Fic/DOC family N-terminal BADO_RS08420 PF01451 Low molecular weight phosphotyrosine protein phosphatase BADO_RS08425 PF16738 Starch-binding module 26 BADO_RS08425 PF00128 Alpha amylase, catalytic domain BADO_RS08430 PF00128 Alpha amylase, catalytic domain BADO_RS08430 PF16738 Starch-binding module 26 BADO_RS08455 PF00872 Transposase, Mutator family BADO_RS08470 PF08533 Beta-galactosidase C-terminal domain BADO_RS08470 PF02449 Beta-galactosidase BADO_RS08470 PF08532 Beta-galactosidase trimerisation domain BADO_RS08475 PF00440 Bacterial regulatory proteins, tetR family BADO_RS08475 PF13977 BetI-type transcriptional repressor, C-terminal BADO_RS08495 PF03477 ATP cone domain BADO_RS08495 PF13597 Anaerobic ribonucleoside-triphosphate reductase BADO_RS08500 PF13742 OB-fold nucleic acid binding domain BADO_RS08500 PF02601 Exonuclease VII, large subunit BADO_RS08505 PF02609 Exonuclease VII small subunit BADO_RS08530 PF13614 AAA domain BADO_RS08545 PF02541 Ppx/GppA phosphatase family BADO_RS08550 PF00155 Aminotransferase class I and II BADO_RS08555 PF03852 DNA mismatch endonuclease Vsr BADO_RS08560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADO_RS08560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADO_RS08565 PF00580 UvrD/REP helicase N-terminal domain BADO_RS08565 PF13361 UvrD-like helicase C-terminal domain BADO_RS08565 PF12462 DNA helicase IV / RNA helicase N terminal BADO_RS08570 PF00293 NUDIX domain BADO_RS08620 PF02146 Sir2 family BADO_RS08625 PF00291 Pyridoxal-phosphate dependent enzyme BADO_RS08625 PF13291 ACT domain BADO_RS08630 PF00128 Alpha amylase, catalytic domain BADO_RS08635 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS08640 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS08650 PF00480 ROK family BADO_RS08655 PF16874 Glycosyl hydrolase family 36 C-terminal domain BADO_RS08655 PF16875 Glycosyl hydrolase family 36 N-terminal domain BADO_RS08660 PF11734 TilS substrate C-terminal domain BADO_RS08660 PF14437 MafB19-like deaminase BADO_RS08660 PF01171 PP-loop family BADO_RS08665 PF00999 Sodium/hydrogen exchanger family BADO_RS08675 PF00692 dUTPase BADO_RS08680 PF00689 Cation transporting ATPase, C-terminus BADO_RS08680 PF00690 Cation transporter/ATPase, N-terminus BADO_RS08685 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BADO_RS08685 PF16353 Domain of unknown function(DUF4981) BADO_RS08685 PF02929 Beta galactosidase small chain BADO_RS08685 PF02837 Glycosyl hydrolases family 2, sugar binding domain BADO_RS08685 PF00703 Glycosyl hydrolases family 2 BADO_RS08695 PF00356 Bacterial regulatory proteins, lacI family BADO_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS08710 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS08725 PF00588 SpoU rRNA Methylase family BADO_RS08725 PF08032 RNA 2'-O ribose methyltransferase substrate binding BADO_RS08735 PF17912 MalK OB fold domain BADO_RS08735 PF00005 ABC transporter BADO_RS08740 PF04397 LytTr DNA-binding domain BADO_RS08740 PF00072 Response regulator receiver domain BADO_RS08750 PF00654 Voltage gated chloride channel BADO_RS08765 PF01915 Glycosyl hydrolase family 3 C-terminal domain BADO_RS08765 PF00933 Glycosyl hydrolase family 3 N terminal domain BADO_RS08765 PF14310 Fibronectin type III-like domain BADO_RS08785 PF01979 Amidohydrolase family BADO_RS08790 PF02449 Beta-galactosidase BADO_RS08790 PF08533 Beta-galactosidase C-terminal domain BADO_RS08790 PF08532 Beta-galactosidase trimerisation domain BADO_RS08810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADO_RS08815 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BADO_RS08815 PF00703 Glycosyl hydrolases family 2 BADO_RS08815 PF16353 Domain of unknown function(DUF4981) BADO_RS08815 PF02837 Glycosyl hydrolases family 2, sugar binding domain BADO_RS08815 PF02929 Beta galactosidase small chain BADO_RS08820 PF00356 Bacterial regulatory proteins, lacI family BADO_RS08840 PF00232 Glycosyl hydrolase family 1 BADO_RS08845 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS08850 PF00528 Binding-protein-dependent transport system inner membrane component BADO_RS08855 PF01547 Bacterial extracellular solute-binding protein BADO_RS08860 PF00356 Bacterial regulatory proteins, lacI family BADO_RS08885 PF14310 Fibronectin type III-like domain BADO_RS08885 PF00933 Glycosyl hydrolase family 3 N terminal domain BADO_RS08885 PF01915 Glycosyl hydrolase family 3 C-terminal domain BADO_RS08890 PF00400 WD domain, G-beta repeat BADO_RS08890 PF00069 Protein kinase domain BADO_RS08910 PF00398 Ribosomal RNA adenine dimethylase BADO_RS08915 PF08544 GHMP kinases C terminal BADO_RS08915 PF00288 GHMP kinases N terminal domain BADO_RS08925 PF01743 Poly A polymerase head domain BADO_RS08925 PF12627 Probable RNA and SrmB- binding site of polymerase A BADO_RS08925 PF13735 tRNA nucleotidyltransferase domain 2 putative BADO_RS08930 PF00293 NUDIX domain BADO_RS08950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADO_RS08955 PF02195 ParB-like nuclease domain BADO_RS08955 PF17762 HTH domain found in ParB protein BADO_RS08960 PF13614 AAA domain BADO_RS08965 PF02527 rRNA small subunit methyltransferase G BADO_RS08970 PF01424 R3H domain BADO_RS08970 PF14804 Jag N-terminus BADO_RS08975 PF02096 60Kd inner membrane protein BADO_RS08980 PF00825 Ribonuclease P BADO_RS08985 PF00468 Ribosomal protein L34 BADO_RS08995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BADO_RS09030 PF01420 Type I restriction modification DNA specificity domain BADO_RS09035 PF08378 Nuclease-related domain BADO_RS09075 PF00128 Alpha amylase, catalytic domain BADO_RS09075 PF16738 Starch-binding module 26 BADO_RS09100 PF07581 The GLUG motif BADO_RS09100 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt)