A4U98_RS00010	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A4U98_RS00020	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
A4U98_RS00020	PWY-6153	autoinducer AI-2 biosynthesis I
A4U98_RS00020	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
A4U98_RS00170	PWY-3961	phosphopantothenate biosynthesis II
A4U98_RS00185	PWY-6749	CMP-legionaminate biosynthesis I
A4U98_RS00265	PWY-6825	phosphatidylcholine biosynthesis V
A4U98_RS00320	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A4U98_RS00320	PWY-6596	adenosine nucleotides degradation I
A4U98_RS00320	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS00325	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4U98_RS00325	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4U98_RS00325	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4U98_RS00355	PWY-4261	glycerol degradation I
A4U98_RS00370	PWY-6807	xyloglucan degradation II (exoglucanase)
A4U98_RS00435	PWY-5344	L-homocysteine biosynthesis
A4U98_RS00435	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
A4U98_RS00470	PWY-6599	guanine and guanosine salvage II
A4U98_RS00470	PWY-6609	adenine and adenosine salvage III
A4U98_RS00470	PWY-6610	adenine and adenosine salvage IV
A4U98_RS00470	PWY-6620	guanine and guanosine salvage
A4U98_RS00540	PWY-6807	xyloglucan degradation II (exoglucanase)
A4U98_RS00580	PWY-6807	xyloglucan degradation II (exoglucanase)
A4U98_RS00645	PWY-5381	pyridine nucleotide cycling (plants)
A4U98_RS00645	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A4U98_RS00645	PWY-6596	adenosine nucleotides degradation I
A4U98_RS00645	PWY-6606	guanosine nucleotides degradation II
A4U98_RS00645	PWY-6607	guanosine nucleotides degradation I
A4U98_RS00645	PWY-6608	guanosine nucleotides degradation III
A4U98_RS00645	PWY-7185	UTP and CTP dephosphorylation I
A4U98_RS00675	PWY-3821	galactose degradation III
A4U98_RS00675	PWY-6317	galactose degradation I (Leloir pathway)
A4U98_RS00675	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
A4U98_RS00675	PWY-6527	stachyose degradation
A4U98_RS00675	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
A4U98_RS00675	PWY-7344	UDP-D-galactose biosynthesis
A4U98_RS00685	PWY-3841	folate transformations II
A4U98_RS00685	PWY-6614	tetrahydrofolate biosynthesis
A4U98_RS00690	PWY-3841	folate transformations II
A4U98_RS00690	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4U98_RS00690	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS00690	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A4U98_RS00690	PWY-7199	pyrimidine deoxyribonucleosides salvage
A4U98_RS00690	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A4U98_RS00730	PWY-3861	mannitol degradation II
A4U98_RS00730	PWY-3881	mannitol biosynthesis
A4U98_RS00730	PWY-5659	GDP-mannose biosynthesis
A4U98_RS00730	PWY-6992	1,5-anhydrofructose degradation
A4U98_RS00730	PWY-7456	mannan degradation
A4U98_RS00730	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
A4U98_RS00730	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
A4U98_RS00745	PWY-1622	formaldehyde assimilation I (serine pathway)
A4U98_RS00745	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4U98_RS00750	PWY-5839	menaquinol-7 biosynthesis
A4U98_RS00750	PWY-5851	demethylmenaquinol-9 biosynthesis
A4U98_RS00750	PWY-5852	demethylmenaquinol-8 biosynthesis I
A4U98_RS00750	PWY-5853	demethylmenaquinol-6 biosynthesis I
A4U98_RS00750	PWY-5890	menaquinol-10 biosynthesis
A4U98_RS00750	PWY-5891	menaquinol-11 biosynthesis
A4U98_RS00750	PWY-5892	menaquinol-12 biosynthesis
A4U98_RS00750	PWY-5895	menaquinol-13 biosynthesis
A4U98_RS00855	PWY-2723	trehalose degradation V
A4U98_RS00855	PWY-3801	sucrose degradation II (sucrose synthase)
A4U98_RS00855	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
A4U98_RS00855	PWY-5661	GDP-glucose biosynthesis
A4U98_RS00855	PWY-5940	streptomycin biosynthesis
A4U98_RS00855	PWY-5941	glycogen degradation II (eukaryotic)
A4U98_RS00855	PWY-622	starch biosynthesis
A4U98_RS00855	PWY-6731	starch degradation III
A4U98_RS00855	PWY-6737	starch degradation V
A4U98_RS00855	PWY-6749	CMP-legionaminate biosynthesis I
A4U98_RS00855	PWY-7238	sucrose biosynthesis II
A4U98_RS00855	PWY-7343	UDP-glucose biosynthesis
A4U98_RS00860	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
A4U98_RS00860	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A4U98_RS00860	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
A4U98_RS00865	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
A4U98_RS00890	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4U98_RS00890	PWY-5723	Rubisco shunt
A4U98_RS00910	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
A4U98_RS00910	PWY-6167	flavin biosynthesis II (archaea)
A4U98_RS00910	PWY-6168	flavin biosynthesis III (fungi)
A4U98_RS00985	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS01105	PWY-3162	L-tryptophan degradation V (side chain pathway)
A4U98_RS01105	PWY-5057	L-valine degradation II
A4U98_RS01105	PWY-5076	L-leucine degradation III
A4U98_RS01105	PWY-5078	L-isoleucine degradation II
A4U98_RS01105	PWY-5079	L-phenylalanine degradation III
A4U98_RS01105	PWY-5082	L-methionine degradation III
A4U98_RS01105	PWY-5162	2-oxopentenoate degradation
A4U98_RS01105	PWY-5436	L-threonine degradation IV
A4U98_RS01105	PWY-5480	pyruvate fermentation to ethanol I
A4U98_RS01105	PWY-5486	pyruvate fermentation to ethanol II
A4U98_RS01105	PWY-5751	phenylethanol biosynthesis
A4U98_RS01105	PWY-6313	serotonin degradation
A4U98_RS01105	PWY-6333	acetaldehyde biosynthesis I
A4U98_RS01105	PWY-6342	noradrenaline and adrenaline degradation
A4U98_RS01105	PWY-6587	pyruvate fermentation to ethanol III
A4U98_RS01105	PWY-6802	salidroside biosynthesis
A4U98_RS01105	PWY-6871	3-methylbutanol biosynthesis
A4U98_RS01105	PWY-7013	L-1,2-propanediol degradation
A4U98_RS01105	PWY-7085	triethylamine degradation
A4U98_RS01105	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4U98_RS01105	PWY-7118	chitin degradation to ethanol
A4U98_RS01105	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
A4U98_RS01105	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A4U98_RS01130	PWY-5941	glycogen degradation II (eukaryotic)
A4U98_RS01130	PWY-6724	starch degradation II
A4U98_RS01130	PWY-6737	starch degradation V
A4U98_RS01130	PWY-7238	sucrose biosynthesis II
A4U98_RS01185	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4U98_RS01185	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4U98_RS01325	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
A4U98_RS01325	PWY-6153	autoinducer AI-2 biosynthesis I
A4U98_RS01325	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
A4U98_RS01330	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A4U98_RS01330	PWY-6164	3-dehydroquinate biosynthesis I
A4U98_RS01330	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
A4U98_RS01340	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A4U98_RS01340	PWY-6164	3-dehydroquinate biosynthesis I
A4U98_RS01340	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
A4U98_RS01360	PWY-7560	methylerythritol phosphate pathway II
A4U98_RS01395	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4U98_RS01395	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4U98_RS01395	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A4U98_RS01395	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A4U98_RS01395	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS01395	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS01395	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4U98_RS01395	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A4U98_RS01400	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4U98_RS01400	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4U98_RS01400	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A4U98_RS01400	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A4U98_RS01400	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS01400	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS01400	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4U98_RS01400	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A4U98_RS01425	PWY-5481	pyruvate fermentation to lactate
A4U98_RS01425	PWY-6901	superpathway of glucose and xylose degradation
A4U98_RS01440	PWY-6012	acyl carrier protein metabolism I
A4U98_RS01440	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
A4U98_RS01445	PWY-4381	fatty acid biosynthesis initiation I
A4U98_RS01445	PWY-5142	acyl-ACP thioesterase pathway
A4U98_RS01445	PWY-5147	oleate biosynthesis I (plants)
A4U98_RS01445	PWY-5366	palmitoleate biosynthesis II (plants and bacteria)
A4U98_RS01445	PWY-5367	petroselinate biosynthesis
A4U98_RS01445	PWY-5966	fatty acid biosynthesis initiation II
A4U98_RS01445	PWY-5971	palmitate biosynthesis II (bacteria and plants)
A4U98_RS01445	PWY-5973	<i>cis</i>-vaccenate biosynthesis
A4U98_RS01445	PWY-5989	stearate biosynthesis II (bacteria and plants)
A4U98_RS01445	PWY-5994	palmitate biosynthesis I (animals and fungi)
A4U98_RS01445	PWY-6113	superpathway of mycolate biosynthesis
A4U98_RS01445	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
A4U98_RS01445	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A4U98_RS01445	PWY-6799	fatty acid biosynthesis (plant mitochondria)
A4U98_RS01445	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A4U98_RS01445	PWY-7663	gondoate biosynthesis (anaerobic)
A4U98_RS01445	PWY-7664	oleate biosynthesis IV (anaerobic)
A4U98_RS01445	PWY-7723	A4U98_RS01445
A4U98_RS01445	PWYG-321	mycolate biosynthesis
A4U98_RS01450	PWY-4381	fatty acid biosynthesis initiation I
A4U98_RS01450	PWY-5743	3-hydroxypropanoate cycle
A4U98_RS01450	PWY-5744	glyoxylate assimilation
A4U98_RS01450	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A4U98_RS01450	PWY-6679	jadomycin biosynthesis
A4U98_RS01450	PWY-6722	candicidin biosynthesis
A4U98_RS01450	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
A4U98_RS01505	PWY-3341	L-proline biosynthesis III
A4U98_RS01505	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
A4U98_RS01580	PWY-3801	sucrose degradation II (sucrose synthase)
A4U98_RS01580	PWY-5054	sorbitol biosynthesis I
A4U98_RS01580	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
A4U98_RS01580	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A4U98_RS01580	PWY-5659	GDP-mannose biosynthesis
A4U98_RS01580	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4U98_RS01580	PWY-621	sucrose degradation III (sucrose invertase)
A4U98_RS01580	PWY-622	starch biosynthesis
A4U98_RS01580	PWY-6981	chitin biosynthesis
A4U98_RS01580	PWY-6992	1,5-anhydrofructose degradation
A4U98_RS01580	PWY-7238	sucrose biosynthesis II
A4U98_RS01580	PWY-7347	sucrose biosynthesis III
A4U98_RS01580	PWY-7385	1,3-propanediol biosynthesis (engineered)
A4U98_RS01585	PWY-5659	GDP-mannose biosynthesis
A4U98_RS01585	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
A4U98_RS01610	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
A4U98_RS01625	PWY-5381	pyridine nucleotide cycling (plants)
A4U98_RS01665	PWY-5101	L-isoleucine biosynthesis II
A4U98_RS01665	PWY-5103	L-isoleucine biosynthesis III
A4U98_RS01665	PWY-5104	L-isoleucine biosynthesis IV
A4U98_RS01665	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
A4U98_RS01665	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A4U98_RS01665	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A4U98_RS01665	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4U98_RS01670	PWY-5101	L-isoleucine biosynthesis II
A4U98_RS01670	PWY-5103	L-isoleucine biosynthesis III
A4U98_RS01670	PWY-5104	L-isoleucine biosynthesis IV
A4U98_RS01670	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
A4U98_RS01670	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A4U98_RS01670	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A4U98_RS01670	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4U98_RS01710	PWY-6807	xyloglucan degradation II (exoglucanase)
A4U98_RS01730	PWY-6829	tRNA methylation (yeast)
A4U98_RS01730	PWY-7285	methylwyosine biosynthesis
A4U98_RS01730	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
A4U98_RS01735	PWY-6825	phosphatidylcholine biosynthesis V
A4U98_RS01875	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4U98_RS01875	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4U98_RS01880	PWY-5667	CDP-diacylglycerol biosynthesis I
A4U98_RS01880	PWY-5981	CDP-diacylglycerol biosynthesis III
A4U98_RS01895	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4U98_RS01895	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4U98_RS01950	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A4U98_RS02005	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
A4U98_RS02005	PWY-2161	folate polyglutamylation
A4U98_RS02005	PWY-2201	folate transformations I
A4U98_RS02005	PWY-3841	folate transformations II
A4U98_RS02035	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4U98_RS02035	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4U98_RS02035	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS02035	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
A4U98_RS02035	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A4U98_RS02035	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A4U98_RS02055	PWY-2301	<i>myo</i>-inositol biosynthesis
A4U98_RS02055	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
A4U98_RS02055	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
A4U98_RS02055	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
A4U98_RS02055	PWY-6664	di-myo-inositol phosphate biosynthesis
A4U98_RS02065	PWY-6871	3-methylbutanol biosynthesis
A4U98_RS02075	PWY-2941	L-lysine biosynthesis II
A4U98_RS02075	PWY-2942	L-lysine biosynthesis III
A4U98_RS02075	PWY-5097	L-lysine biosynthesis VI
A4U98_RS02075	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4U98_RS02075	PWY-6559	spermidine biosynthesis II
A4U98_RS02075	PWY-6562	norspermidine biosynthesis
A4U98_RS02075	PWY-7153	grixazone biosynthesis
A4U98_RS02075	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4U98_RS02085	PWY-2941	L-lysine biosynthesis II
A4U98_RS02085	PWY-2942	L-lysine biosynthesis III
A4U98_RS02085	PWY-5097	L-lysine biosynthesis VI
A4U98_RS02085	PWY-6559	spermidine biosynthesis II
A4U98_RS02085	PWY-6562	norspermidine biosynthesis
A4U98_RS02085	PWY-7153	grixazone biosynthesis
A4U98_RS02155	PWY-7183	pyrimidine nucleobases salvage I
A4U98_RS02455	PWY-3121	linamarin degradation
A4U98_RS02455	PWY-5176	coumarin biosynthesis (via 2-coumarate)
A4U98_RS02455	PWY-6002	lotaustralin degradation
A4U98_RS02455	PWY-6788	cellulose degradation II (fungi)
A4U98_RS02455	PWY-7089	taxiphyllin bioactivation
A4U98_RS02455	PWY-7091	linustatin bioactivation
A4U98_RS02455	PWY-7092	neolinustatin bioactivation
A4U98_RS02475	PWY-5103	L-isoleucine biosynthesis III
A4U98_RS02475	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4U98_RS02545	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
A4U98_RS02590	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS02595	PWY-1042	glycolysis IV (plant cytosol)
A4U98_RS02595	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4U98_RS02595	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4U98_RS02595	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4U98_RS02595	PWY-7385	1,3-propanediol biosynthesis (engineered)
A4U98_RS02675	PWY-6700	queuosine biosynthesis
A4U98_RS02790	PWY-5958	acridone alkaloid biosynthesis
A4U98_RS02790	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A4U98_RS02790	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A4U98_RS02835	PWY-5941	glycogen degradation II (eukaryotic)
A4U98_RS02835	PWY-6731	starch degradation III
A4U98_RS02835	PWY-6737	starch degradation V
A4U98_RS02835	PWY-7238	sucrose biosynthesis II
A4U98_RS02865	PWY-1622	formaldehyde assimilation I (serine pathway)
A4U98_RS02865	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A4U98_RS02865	PWY-5913	TCA cycle VI (obligate autotrophs)
A4U98_RS02865	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4U98_RS02865	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
A4U98_RS02865	PWY-6549	L-glutamine biosynthesis III
A4U98_RS02865	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A4U98_RS02865	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A4U98_RS02865	PWY-7124	ethylene biosynthesis V (engineered)
A4U98_RS02945	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A4U98_RS02945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4U98_RS02945	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A4U98_RS02945	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A4U98_RS03250	PWY-7560	methylerythritol phosphate pathway II
A4U98_RS03315	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS03340	PWY-6527	stachyose degradation
A4U98_RS03535	PWY-5941	glycogen degradation II (eukaryotic)
A4U98_RS03535	PWY-6724	starch degradation II
A4U98_RS03535	PWY-6737	starch degradation V
A4U98_RS03535	PWY-7238	sucrose biosynthesis II
A4U98_RS03650	PWY-822	fructan biosynthesis
A4U98_RS03655	PWY-2201	folate transformations I
A4U98_RS03695	PWY-6527	stachyose degradation
A4U98_RS03805	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
A4U98_RS03805	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
A4U98_RS03805	PWY-7622	UDP-galactofuranose biosynthesis
A4U98_RS04145	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A4U98_RS04190	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
A4U98_RS04215	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS04225	PWY-3461	L-tyrosine biosynthesis II
A4U98_RS04225	PWY-3462	L-phenylalanine biosynthesis II
A4U98_RS04225	PWY-6120	L-tyrosine biosynthesis III
A4U98_RS04225	PWY-6627	salinosporamide A biosynthesis
A4U98_RS04225	PWY-7626	bacilysin biosynthesis
A4U98_RS04290	PWY-6695	oxalate degradation II
A4U98_RS04290	PWY-6696	oxalate degradation III
A4U98_RS04310	PWY-6695	oxalate degradation II
A4U98_RS04345	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS04355	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS04420	PWY-2941	L-lysine biosynthesis II
A4U98_RS04420	PWY-2942	L-lysine biosynthesis III
A4U98_RS04420	PWY-5097	L-lysine biosynthesis VI
A4U98_RS04430	PWY-702	L-methionine biosynthesis II
A4U98_RS04540	PWY-6749	CMP-legionaminate biosynthesis I
A4U98_RS04590	PWY-6749	CMP-legionaminate biosynthesis I
A4U98_RS04635	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4U98_RS04635	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
A4U98_RS04635	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4U98_RS04635	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4U98_RS04655	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
A4U98_RS04660	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
A4U98_RS04710	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
A4U98_RS04715	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
A4U98_RS04735	PWY-6807	xyloglucan degradation II (exoglucanase)
A4U98_RS04770	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
A4U98_RS04790	PWY-3221	dTDP-L-rhamnose biosynthesis II
A4U98_RS04790	PWY-6808	dTDP-D-forosamine biosynthesis
A4U98_RS04790	PWY-6942	dTDP-D-desosamine biosynthesis
A4U98_RS04790	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
A4U98_RS04790	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
A4U98_RS04790	PWY-6974	dTDP-L-olivose biosynthesis
A4U98_RS04790	PWY-6976	dTDP-L-mycarose biosynthesis
A4U98_RS04790	PWY-7104	dTDP-L-megosamine biosynthesis
A4U98_RS04790	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
A4U98_RS04790	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
A4U98_RS04790	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
A4U98_RS04790	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
A4U98_RS04790	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
A4U98_RS04790	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
A4U98_RS04790	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
A4U98_RS04790	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
A4U98_RS04790	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
A4U98_RS04790	PWY-7688	A4U98_RS04790
A4U98_RS04830	PWY-5381	pyridine nucleotide cycling (plants)
A4U98_RS04850	PWY-7396	butanol and isobutanol biosynthesis (engineered)
A4U98_RS04880	PWY-5686	UMP biosynthesis
A4U98_RS04895	PWY-6317	galactose degradation I (Leloir pathway)
A4U98_RS04895	PWY-6527	stachyose degradation
A4U98_RS04900	PWY-3821	galactose degradation III
A4U98_RS04900	PWY-6317	galactose degradation I (Leloir pathway)
A4U98_RS04900	PWY-6527	stachyose degradation
A4U98_RS04920	PWY-6004	glycine betaine biosynthesis V (from glycine)
A4U98_RS05000	PWY-2941	L-lysine biosynthesis II
A4U98_RS05000	PWY-2942	L-lysine biosynthesis III
A4U98_RS05000	PWY-5097	L-lysine biosynthesis VI
A4U98_RS05005	PWY-2941	L-lysine biosynthesis II
A4U98_RS05005	PWY-2942	L-lysine biosynthesis III
A4U98_RS05005	PWY-5097	L-lysine biosynthesis VI
A4U98_RS05015	PWY-4061	glutathione-mediated detoxification I
A4U98_RS05015	PWY-6842	glutathione-mediated detoxification II
A4U98_RS05015	PWY-7112	4-hydroxy-2-nonenal detoxification
A4U98_RS05020	PWY-6749	CMP-legionaminate biosynthesis I
A4U98_RS05075	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS05075	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS05075	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS05100	PWY-6840	homoglutathione biosynthesis
A4U98_RS05100	PWY-7255	ergothioneine biosynthesis I (bacteria)
A4U98_RS05265	PWY-6654	phosphopantothenate biosynthesis III
A4U98_RS05325	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4U98_RS05325	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4U98_RS05330	PWY-2941	L-lysine biosynthesis II
A4U98_RS05330	PWY-5097	L-lysine biosynthesis VI
A4U98_RS05390	PWY-7294	xylose degradation IV
A4U98_RS05390	PWY-7295	L-arabinose degradation IV
A4U98_RS05390	PWY-7560	methylerythritol phosphate pathway II
A4U98_RS05460	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A4U98_RS05460	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A4U98_RS05460	PWY-6897	thiamin salvage II
A4U98_RS05460	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A4U98_RS05460	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A4U98_RS05460	PWY-6910	hydroxymethylpyrimidine salvage
A4U98_RS05460	PWY-7356	thiamin salvage IV (yeast)
A4U98_RS05460	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A4U98_RS05465	PWY-6897	thiamin salvage II
A4U98_RS05465	PWY-7356	thiamin salvage IV (yeast)
A4U98_RS05465	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A4U98_RS05555	PWY-381	nitrate reduction II (assimilatory)
A4U98_RS05555	PWY-5675	nitrate reduction V (assimilatory)
A4U98_RS05555	PWY-6549	L-glutamine biosynthesis III
A4U98_RS05555	PWY-6963	ammonia assimilation cycle I
A4U98_RS05555	PWY-6964	ammonia assimilation cycle II
A4U98_RS05575	PWY-5481	pyruvate fermentation to lactate
A4U98_RS05575	PWY-6901	superpathway of glucose and xylose degradation
A4U98_RS05615	PWY-2201	folate transformations I
A4U98_RS05635	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4U98_RS05635	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4U98_RS05640	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4U98_RS05640	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4U98_RS05640	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4U98_RS05645	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4U98_RS05645	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4U98_RS05655	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A4U98_RS05655	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
A4U98_RS05655	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A4U98_RS05655	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A4U98_RS05660	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A4U98_RS05660	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A4U98_RS05785	PWY-2161	folate polyglutamylation
A4U98_RS05825	PWY-1042	glycolysis IV (plant cytosol)
A4U98_RS05825	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4U98_RS05825	PWY-6901	superpathway of glucose and xylose degradation
A4U98_RS05825	PWY-7003	glycerol degradation to butanol
A4U98_RS05830	PWY-6898	thiamin salvage III
A4U98_RS05830	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A4U98_RS05830	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A4U98_RS05830	PWY-7356	thiamin salvage IV (yeast)
A4U98_RS05880	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
A4U98_RS05885	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
A4U98_RS06015	PWY-2941	L-lysine biosynthesis II
A4U98_RS06015	PWY-2942	L-lysine biosynthesis III
A4U98_RS06015	PWY-5097	L-lysine biosynthesis VI
A4U98_RS06035	PWY-2781	<i>cis</i>-zeatin biosynthesis
A4U98_RS06045	PWY-5269	cardiolipin biosynthesis II
A4U98_RS06045	PWY-5668	cardiolipin biosynthesis I
A4U98_RS06180	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A4U98_RS06180	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A4U98_RS06180	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A4U98_RS06180	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
A4U98_RS06225	PWY-5480	pyruvate fermentation to ethanol I
A4U98_RS06225	PWY-5485	pyruvate fermentation to acetate IV
A4U98_RS06225	PWY-5493	reductive monocarboxylic acid cycle
A4U98_RS06275	PWY-6936	seleno-amino acid biosynthesis
A4U98_RS06295	PWY-3781	aerobic respiration I (cytochrome c)
A4U98_RS06295	PWY-4302	aerobic respiration III (alternative oxidase pathway)
A4U98_RS06295	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A4U98_RS06295	PWY-5690	TCA cycle II (plants and fungi)
A4U98_RS06295	PWY-6728	methylaspartate cycle
A4U98_RS06295	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4U98_RS06295	PWY-7254	TCA cycle VII (acetate-producers)
A4U98_RS06295	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A4U98_RS06300	PWY-3781	aerobic respiration I (cytochrome c)
A4U98_RS06300	PWY-4302	aerobic respiration III (alternative oxidase pathway)
A4U98_RS06300	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A4U98_RS06300	PWY-5690	TCA cycle II (plants and fungi)
A4U98_RS06300	PWY-6728	methylaspartate cycle
A4U98_RS06300	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4U98_RS06300	PWY-7254	TCA cycle VII (acetate-producers)
A4U98_RS06300	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
A4U98_RS06325	PWY-5344	L-homocysteine biosynthesis
A4U98_RS06325	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
A4U98_RS06365	PWY-3341	L-proline biosynthesis III
A4U98_RS06365	PWY-4981	L-proline biosynthesis II (from arginine)
A4U98_RS06365	PWY-6344	L-ornithine degradation II (Stickland reaction)
A4U98_RS06435	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A4U98_RS06435	PWY-6855	chitin degradation I (archaea)
A4U98_RS06435	PWY-6906	chitin derivatives degradation
A4U98_RS06445	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A4U98_RS06470	PWY-5392	reductive TCA cycle II
A4U98_RS06470	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
A4U98_RS06470	PWY-5690	TCA cycle II (plants and fungi)
A4U98_RS06470	PWY-5913	TCA cycle VI (obligate autotrophs)
A4U98_RS06470	PWY-6728	methylaspartate cycle
A4U98_RS06470	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4U98_RS06470	PWY-7254	TCA cycle VII (acetate-producers)
A4U98_RS06470	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A4U98_RS06520	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
A4U98_RS06545	PWY-1042	glycolysis IV (plant cytosol)
A4U98_RS06545	PWY-1622	formaldehyde assimilation I (serine pathway)
A4U98_RS06545	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A4U98_RS06545	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4U98_RS06545	PWY-5723	Rubisco shunt
A4U98_RS06545	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4U98_RS06545	PWY-6886	1-butanol autotrophic biosynthesis
A4U98_RS06545	PWY-6901	superpathway of glucose and xylose degradation
A4U98_RS06545	PWY-7003	glycerol degradation to butanol
A4U98_RS06545	PWY-7124	ethylene biosynthesis V (engineered)
A4U98_RS06545	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A4U98_RS06635	PWY-5659	GDP-mannose biosynthesis
A4U98_RS06635	PWY-7456	mannan degradation
A4U98_RS06635	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
A4U98_RS06635	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
A4U98_RS06655	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
A4U98_RS06655	PWY-622	starch biosynthesis
A4U98_RS06665	PWY-7560	methylerythritol phosphate pathway II
A4U98_RS06685	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
A4U98_RS06685	PWY-2201	folate transformations I
A4U98_RS06685	PWY-3841	folate transformations II
A4U98_RS06685	PWY-5030	L-histidine degradation III
A4U98_RS06685	PWY-5497	purine nucleobases degradation II (anaerobic)
A4U98_RS06685	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
A4U98_RS06710	PWY-1042	glycolysis IV (plant cytosol)
A4U98_RS06710	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A4U98_RS06710	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4U98_RS06710	PWY-5723	Rubisco shunt
A4U98_RS06710	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4U98_RS06710	PWY-6886	1-butanol autotrophic biosynthesis
A4U98_RS06710	PWY-6901	superpathway of glucose and xylose degradation
A4U98_RS06710	PWY-7003	glycerol degradation to butanol
A4U98_RS06710	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A4U98_RS06710	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A4U98_RS06760	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4U98_RS06765	PWY-5482	pyruvate fermentation to acetate II
A4U98_RS06765	PWY-5485	pyruvate fermentation to acetate IV
A4U98_RS06765	PWY-5497	purine nucleobases degradation II (anaerobic)
A4U98_RS06770	PWY-1281	sulfoacetaldehyde degradation I
A4U98_RS06770	PWY-5482	pyruvate fermentation to acetate II
A4U98_RS06770	PWY-5485	pyruvate fermentation to acetate IV
A4U98_RS06770	PWY-5497	purine nucleobases degradation II (anaerobic)
A4U98_RS06770	PWY-6637	sulfolactate degradation II
A4U98_RS06780	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS06815	PWY-6610	adenine and adenosine salvage IV
A4U98_RS06935	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4U98_RS06940	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4U98_RS06940	PWY-6164	3-dehydroquinate biosynthesis I
A4U98_RS06945	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4U98_RS06945	PWY-6416	quinate degradation II
A4U98_RS06945	PWY-6707	gallate biosynthesis
A4U98_RS06955	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
A4U98_RS06955	PWY-7177	UTP and CTP dephosphorylation II
A4U98_RS06955	PWY-7185	UTP and CTP dephosphorylation I
A4U98_RS06980	PWY-6823	molybdenum cofactor biosynthesis
A4U98_RS06980	PWY-6891	thiazole biosynthesis II (Bacillus)
A4U98_RS06980	PWY-6892	thiazole biosynthesis I (E. coli)
A4U98_RS06980	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
A4U98_RS06995	PWY-622	starch biosynthesis
A4U98_RS07010	PWY-2201	folate transformations I
A4U98_RS07070	PWY-5057	L-valine degradation II
A4U98_RS07070	PWY-5076	L-leucine degradation III
A4U98_RS07070	PWY-5078	L-isoleucine degradation II
A4U98_RS07070	PWY-5101	L-isoleucine biosynthesis II
A4U98_RS07070	PWY-5103	L-isoleucine biosynthesis III
A4U98_RS07070	PWY-5104	L-isoleucine biosynthesis IV
A4U98_RS07070	PWY-5108	L-isoleucine biosynthesis V
A4U98_RS07115	PWY-622	starch biosynthesis
A4U98_RS07125	PWY-6829	tRNA methylation (yeast)
A4U98_RS07135	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A4U98_RS07135	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
A4U98_RS07135	PWY-6936	seleno-amino acid biosynthesis
A4U98_RS07135	PWY-702	L-methionine biosynthesis II
A4U98_RS07140	PWY-2201	folate transformations I
A4U98_RS07140	PWY-3841	folate transformations II
A4U98_RS07155	PWY-5686	UMP biosynthesis
A4U98_RS07165	PWY-5686	UMP biosynthesis
A4U98_RS07170	PWY-5686	UMP biosynthesis
A4U98_RS07185	PWY-5686	UMP biosynthesis
A4U98_RS07235	PWY-6938	NADH repair
A4U98_RS07285	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A4U98_RS07300	PWY-1042	glycolysis IV (plant cytosol)
A4U98_RS07300	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4U98_RS07300	PWY-6886	1-butanol autotrophic biosynthesis
A4U98_RS07300	PWY-6901	superpathway of glucose and xylose degradation
A4U98_RS07300	PWY-7003	glycerol degradation to butanol
A4U98_RS07305	PWY-1042	glycolysis IV (plant cytosol)
A4U98_RS07305	PWY-5484	glycolysis II (from fructose 6-phosphate)
A4U98_RS07305	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A4U98_RS07305	PWY-7003	glycerol degradation to butanol
A4U98_RS07340	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4U98_RS07340	PWY-5723	Rubisco shunt
A4U98_RS07345	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4U98_RS07345	PWY-5723	Rubisco shunt
A4U98_RS07345	PWY-6891	thiazole biosynthesis II (Bacillus)
A4U98_RS07345	PWY-6892	thiazole biosynthesis I (E. coli)
A4U98_RS07345	PWY-6901	superpathway of glucose and xylose degradation
A4U98_RS07345	PWY-7560	methylerythritol phosphate pathway II
A4U98_RS07365	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
A4U98_RS07470	PWY-6605	adenine and adenosine salvage II
A4U98_RS07470	PWY-6610	adenine and adenosine salvage IV
A4U98_RS07475	PWY-5392	reductive TCA cycle II
A4U98_RS07475	PWY-5537	pyruvate fermentation to acetate V
A4U98_RS07475	PWY-5538	pyruvate fermentation to acetate VI
A4U98_RS07475	PWY-5690	TCA cycle II (plants and fungi)
A4U98_RS07475	PWY-5913	TCA cycle VI (obligate autotrophs)
A4U98_RS07475	PWY-6728	methylaspartate cycle
A4U98_RS07475	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4U98_RS07475	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A4U98_RS07480	PWY-5392	reductive TCA cycle II
A4U98_RS07480	PWY-5537	pyruvate fermentation to acetate V
A4U98_RS07480	PWY-5538	pyruvate fermentation to acetate VI
A4U98_RS07480	PWY-5690	TCA cycle II (plants and fungi)
A4U98_RS07480	PWY-5913	TCA cycle VI (obligate autotrophs)
A4U98_RS07480	PWY-6728	methylaspartate cycle
A4U98_RS07480	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4U98_RS07480	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A4U98_RS07490	PWY-6123	inosine-5'-phosphate biosynthesis I
A4U98_RS07490	PWY-6124	inosine-5'-phosphate biosynthesis II
A4U98_RS07490	PWY-7234	inosine-5'-phosphate biosynthesis III
A4U98_RS07510	PWY-7205	CMP phosphorylation
A4U98_RS07520	PWY-3801	sucrose degradation II (sucrose synthase)
A4U98_RS07520	PWY-6527	stachyose degradation
A4U98_RS07520	PWY-7238	sucrose biosynthesis II
A4U98_RS07520	PWY-7343	UDP-glucose biosynthesis
A4U98_RS07590	PWY-5269	cardiolipin biosynthesis II
A4U98_RS07590	PWY-5668	cardiolipin biosynthesis I
A4U98_RS07605	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A4U98_RS07605	PWY-5723	Rubisco shunt
A4U98_RS07645	PWY-5958	acridone alkaloid biosynthesis
A4U98_RS07645	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A4U98_RS07645	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A4U98_RS07675	PWY-2201	folate transformations I
A4U98_RS07725	PWY-5913	TCA cycle VI (obligate autotrophs)
A4U98_RS07725	PWY-6549	L-glutamine biosynthesis III
A4U98_RS07725	PWY-6728	methylaspartate cycle
A4U98_RS07725	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A4U98_RS07725	PWY-7124	ethylene biosynthesis V (engineered)
A4U98_RS07725	PWY-7254	TCA cycle VII (acetate-producers)
A4U98_RS07725	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A4U98_RS07765	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
A4U98_RS07765	PWY-5368	dimorphecolate biosynthesis
A4U98_RS07765	PWY-5995	linoleate biosynthesis I (plants)
A4U98_RS07765	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
A4U98_RS07765	PWY-6803	phosphatidylcholine acyl editing
A4U98_RS07765	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
A4U98_RS07765	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
A4U98_RS07765	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
A4U98_RS07765	PWY-7470	phosphatidylcholine biosynthesis VII
A4U98_RS07765	PWY-7618	ricinoleate biosynthesis
A4U98_RS07775	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
A4U98_RS07775	PWY-5368	dimorphecolate biosynthesis
A4U98_RS07775	PWY-5995	linoleate biosynthesis I (plants)
A4U98_RS07775	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
A4U98_RS07775	PWY-6803	phosphatidylcholine acyl editing
A4U98_RS07775	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
A4U98_RS07775	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
A4U98_RS07775	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
A4U98_RS07775	PWY-7470	phosphatidylcholine biosynthesis VII
A4U98_RS07775	PWY-7618	ricinoleate biosynthesis
A4U98_RS07820	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
A4U98_RS07820	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
A4U98_RS07850	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A4U98_RS07850	PWY-5667	CDP-diacylglycerol biosynthesis I
A4U98_RS07850	PWY-6453	stigma estolide biosynthesis
A4U98_RS07850	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
A4U98_RS07850	PWY-7587	oleate biosynthesis III (cyanobacteria)
A4U98_RS07865	PWY-5381	pyridine nucleotide cycling (plants)
A4U98_RS07865	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
A4U98_RS07875	PWY-3341	L-proline biosynthesis III
A4U98_RS07875	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
A4U98_RS07895	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
A4U98_RS07895	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A4U98_RS07895	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
A4U98_RS07935	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A4U98_RS07940	PWY-4983	L-citrulline-nitric oxide cycle
A4U98_RS07940	PWY-4984	urea cycle
A4U98_RS07940	PWY-5	canavanine biosynthesis
A4U98_RS07940	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4U98_RS07940	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4U98_RS07945	PWY-4983	L-citrulline-nitric oxide cycle
A4U98_RS07945	PWY-4984	urea cycle
A4U98_RS07945	PWY-5	canavanine biosynthesis
A4U98_RS07945	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4U98_RS07945	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4U98_RS07955	PWY-4981	L-proline biosynthesis II (from arginine)
A4U98_RS07955	PWY-4984	urea cycle
A4U98_RS07955	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4U98_RS07965	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4U98_RS07965	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4U98_RS07970	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4U98_RS07975	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4U98_RS07975	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4U98_RS08065	PWY-381	nitrate reduction II (assimilatory)
A4U98_RS08065	PWY-5675	nitrate reduction V (assimilatory)
A4U98_RS08065	PWY-6549	L-glutamine biosynthesis III
A4U98_RS08065	PWY-6963	ammonia assimilation cycle I
A4U98_RS08065	PWY-6964	ammonia assimilation cycle II
A4U98_RS08130	PWY-6899	base-degraded thiamin salvage
A4U98_RS08130	PWY-7356	thiamin salvage IV (yeast)
A4U98_RS08325	PWY-6123	inosine-5'-phosphate biosynthesis I
A4U98_RS08325	PWY-6124	inosine-5'-phosphate biosynthesis II
A4U98_RS08325	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS08325	PWY-7234	inosine-5'-phosphate biosynthesis III
A4U98_RS08390	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A4U98_RS08390	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
A4U98_RS08400	PWY-5101	L-isoleucine biosynthesis II
A4U98_RS08400	PWY-5103	L-isoleucine biosynthesis III
A4U98_RS08400	PWY-5104	L-isoleucine biosynthesis IV
A4U98_RS08400	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A4U98_RS08405	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A4U98_RS08410	PWY-5686	UMP biosynthesis
A4U98_RS08415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4U98_RS08415	PWY-5686	UMP biosynthesis
A4U98_RS08415	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4U98_RS08420	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A4U98_RS08420	PWY-5686	UMP biosynthesis
A4U98_RS08420	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A4U98_RS08485	PWY-6123	inosine-5'-phosphate biosynthesis I
A4U98_RS08485	PWY-6124	inosine-5'-phosphate biosynthesis II
A4U98_RS08485	PWY-7234	inosine-5'-phosphate biosynthesis III
A4U98_RS08545	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4U98_RS08545	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4U98_RS08545	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4U98_RS08545	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
A4U98_RS08550	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4U98_RS08550	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4U98_RS08550	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4U98_RS08555	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A4U98_RS08555	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A4U98_RS08555	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A4U98_RS08580	PWY-6123	inosine-5'-phosphate biosynthesis I
A4U98_RS08580	PWY-7234	inosine-5'-phosphate biosynthesis III
A4U98_RS08585	PWY-6891	thiazole biosynthesis II (Bacillus)
A4U98_RS08585	PWY-6892	thiazole biosynthesis I (E. coli)
A4U98_RS08585	PWY-7560	methylerythritol phosphate pathway II
