locus-tag class description BIF_RS00005 PF00308 Bacterial dnaA protein BIF_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix BIF_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BIF_RS00010 PF02767 DNA polymerase III beta subunit, central domain BIF_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BIF_RS00015 PF02463 RecF/RecN/SMC N terminal domain BIF_RS00020 PF05258 Dna[CI] antecedent, DciA BIF_RS00025 PF00204 DNA gyrase B BIF_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus BIF_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS00025 PF01751 Toprim domain BIF_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A BIF_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller BIF_RS00045 PF03006 Haemolysin-III related BIF_RS00050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BIF_RS00050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BIF_RS00055 PF07690 Major Facilitator Superfamily BIF_RS00060 PF02156 Glycosyl hydrolase family 26 BIF_RS00060 PF03425 Carbohydrate binding domain (family 11) BIF_RS00065 PF02156 Glycosyl hydrolase family 26 BIF_RS00065 PF03425 Carbohydrate binding domain (family 11) BIF_RS00070 PF01741 Large-conductance mechanosensitive channel, MscL BIF_RS00100 PF13749 Putative ATP-dependent DNA helicase recG C-terminal BIF_RS00100 PF00270 DEAD/DEAH box helicase BIF_RS00100 PF17191 RecG wedge domain BIF_RS00110 PF17760 UvrA interaction domain BIF_RS00110 PF17755 UvrA DNA-binding domain BIF_RS00110 PF00005 ABC transporter BIF_RS00115 PF08241 Methyltransferase domain BIF_RS00125 PF00890 FAD binding domain BIF_RS00125 PF04205 FMN-binding domain BIF_RS00125 PF03358 NADPH-dependent FMN reductase BIF_RS00165 PF00145 C-5 cytosine-specific DNA methylase BIF_RS00165 PF12728 Helix-turn-helix domain BIF_RS00215 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BIF_RS00220 PF03466 LysR substrate binding domain BIF_RS00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BIF_RS00230 PF14310 Fibronectin type III-like domain BIF_RS00230 PF00933 Glycosyl hydrolase family 3 N terminal domain BIF_RS00230 PF01915 Glycosyl hydrolase family 3 C-terminal domain BIF_RS00235 PF01636 Phosphotransferase enzyme family BIF_RS00260 PF02449 Beta-galactosidase BIF_RS00260 PF08533 Beta-galactosidase C-terminal domain BIF_RS00260 PF08532 Beta-galactosidase trimerisation domain BIF_RS00275 PF00210 Ferritin-like domain BIF_RS00280 PF01595 Cyclin M transmembrane N-terminal domain BIF_RS00280 PF03471 Transporter associated domain BIF_RS00280 PF00571 CBS domain BIF_RS00285 PF00484 Carbonic anhydrase BIF_RS00290 PF00356 Bacterial regulatory proteins, lacI family BIF_RS00300 PF00005 ABC transporter BIF_RS00310 PF00356 Bacterial regulatory proteins, lacI family BIF_RS00315 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BIF_RS00325 PF00596 Class II Aldolase and Adducin N-terminal domain BIF_RS00330 PF02610 L-arabinose isomerase BIF_RS00330 PF11762 L-arabinose isomerase C-terminal domain BIF_RS00335 PF00248 Aldo/keto reductase family BIF_RS00340 PF00311 Phosphoenolpyruvate carboxylase BIF_RS00355 PF00579 tRNA synthetases class I (W and Y) BIF_RS00370 PF00343 Carbohydrate phosphorylase BIF_RS00390 PF06781 Cell division protein CrgA BIF_RS00400 PF04203 Sortase domain BIF_RS00405 PF00117 Glutamine amidotransferase class-I BIF_RS00410 PF00069 Protein kinase domain BIF_RS00410 PF03793 PASTA domain BIF_RS00415 PF00069 Protein kinase domain BIF_RS00420 PF00905 Penicillin binding protein transpeptidase domain BIF_RS00425 PF01098 Cell cycle protein BIF_RS00445 PF00326 Prolyl oligopeptidase family BIF_RS00445 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BIF_RS00450 PF00892 EamA-like transporter family BIF_RS00465 PF13649 Methyltransferase domain BIF_RS00470 PF04226 Transglycosylase associated protein BIF_RS00475 PF04226 Transglycosylase associated protein BIF_RS00485 PF07992 Pyridine nucleotide-disulphide oxidoreductase BIF_RS00495 PF13180 PDZ domain BIF_RS00495 PF17820 PDZ domain BIF_RS00510 PF01702 Queuine tRNA-ribosyltransferase BIF_RS00520 PF01435 Peptidase family M48 BIF_RS00535 PF07690 Major Facilitator Superfamily BIF_RS00550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BIF_RS00550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BIF_RS00570 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BIF_RS00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BIF_RS00575 PF03466 LysR substrate binding domain BIF_RS00580 PF00248 Aldo/keto reductase family BIF_RS00590 PF00175 Oxidoreductase NAD-binding domain BIF_RS00590 PF00111 2Fe-2S iron-sulfur cluster binding domain BIF_RS00615 PF00107 Zinc-binding dehydrogenase BIF_RS00615 PF08240 Alcohol dehydrogenase GroES-like domain BIF_RS00620 PF03466 LysR substrate binding domain BIF_RS00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BIF_RS00625 PF01522 Polysaccharide deacetylase BIF_RS00625 PF03422 Carbohydrate binding module (family 6) BIF_RS00625 PF00457 Glycosyl hydrolases family 11 BIF_RS00630 PF01116 Fructose-bisphosphate aldolase class-II BIF_RS00635 PF00709 Adenylosuccinate synthetase BIF_RS00640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BIF_RS00645 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BIF_RS00660 PF00005 ABC transporter BIF_RS00660 PF12399 Branched-chain amino acid ATP-binding cassette transporter BIF_RS00665 PF00005 ABC transporter BIF_RS00675 PF00356 Bacterial regulatory proteins, lacI family BIF_RS00675 PF13407 Periplasmic binding protein domain BIF_RS00680 PF00128 Alpha amylase, catalytic domain BIF_RS00680 PF09244 Domain of unknown function (DUF1964) BIF_RS00730 PF07690 Major Facilitator Superfamily BIF_RS00730 PF00083 Sugar (and other) transporter BIF_RS00735 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BIF_RS00735 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BIF_RS00750 PF00232 Glycosyl hydrolase family 1 BIF_RS00760 PF00356 Bacterial regulatory proteins, lacI family BIF_RS00785 PF00005 ABC transporter BIF_RS00790 PF03649 Uncharacterised protein family (UPF0014) BIF_RS00795 PF00324 Amino acid permease BIF_RS00800 PF00005 ABC transporter BIF_RS00800 PF02687 FtsX-like permease family BIF_RS00800 PF12704 MacB-like periplasmic core domain BIF_RS00810 PF00324 Amino acid permease BIF_RS00825 PF12704 MacB-like periplasmic core domain BIF_RS00825 PF02687 FtsX-like permease family BIF_RS00830 PF12704 MacB-like periplasmic core domain BIF_RS00830 PF02687 FtsX-like permease family BIF_RS00830 PF00005 ABC transporter BIF_RS00835 PF01047 MarR family BIF_RS00840 PF00005 ABC transporter BIF_RS00840 PF00664 ABC transporter transmembrane region BIF_RS00845 PF00664 ABC transporter transmembrane region BIF_RS00845 PF00005 ABC transporter BIF_RS00850 PF03422 Carbohydrate binding module (family 6) BIF_RS00850 PF00457 Glycosyl hydrolases family 11 BIF_RS00850 PF01522 Polysaccharide deacetylase BIF_RS00855 PF01569 PAP2 superfamily BIF_RS00860 PF00132 Bacterial transferase hexapeptide (six repeats) BIF_RS00860 PF12464 Maltose acetyltransferase BIF_RS00870 PF13458 Periplasmic binding protein BIF_RS00875 PF00440 Bacterial regulatory proteins, tetR family BIF_RS00880 PF01061 ABC-2 type transporter BIF_RS00885 PF01061 ABC-2 type transporter BIF_RS00900 PF00005 ABC transporter BIF_RS00930 PF03577 Peptidase family C69 BIF_RS00935 PF00440 Bacterial regulatory proteins, tetR family BIF_RS00940 PF00448 SRP54-type protein, GTPase domain BIF_RS00940 PF02881 SRP54-type protein, helical bundle domain BIF_RS00945 PF00909 Ammonium Transporter Family BIF_RS00950 PF00543 Nitrogen regulatory protein P-II BIF_RS00955 PF01966 HD domain BIF_RS00955 PF08335 GlnD PII-uridylyltransferase BIF_RS00955 PF01909 Nucleotidyltransferase domain BIF_RS00965 PF03796 DnaB-like helicase C terminal domain BIF_RS00965 PF00772 DnaB-like helicase N terminal domain BIF_RS00970 PF08245 Mur ligase middle domain BIF_RS00970 PF08353 Domain of unknown function (DUF1727) BIF_RS00975 PF07685 CobB/CobQ-like glutamine amidotransferase domain BIF_RS00985 PF03109 ABC1 family BIF_RS01005 PF00293 NUDIX domain BIF_RS01005 PF00300 Histidine phosphatase superfamily (branch 1) BIF_RS01010 PF13090 Polyphosphate kinase C-terminal domain 2 BIF_RS01010 PF02503 Polyphosphate kinase middle domain BIF_RS01010 PF17941 Polyphosphate kinase C-terminal domain 1 BIF_RS01010 PF13089 Polyphosphate kinase N-terminal domain BIF_RS01025 PF00437 Type II/IV secretion system protein BIF_RS01055 PF12169 DNA polymerase III subunits gamma and tau domain III BIF_RS01060 PF02132 RecR protein BIF_RS01060 PF13662 Toprim domain BIF_RS01065 PF00696 Amino acid kinase family BIF_RS01065 PF01842 ACT domain BIF_RS01065 PF13840 ACT domain BIF_RS01070 PF13840 ACT domain BIF_RS01070 PF00696 Amino acid kinase family BIF_RS01070 PF01842 ACT domain BIF_RS01075 PF02774 Semialdehyde dehydrogenase, dimerisation domain BIF_RS01075 PF01118 Semialdehyde dehydrogenase, NAD binding domain BIF_RS01085 PF08502 LeuA allosteric (dimerisation) domain BIF_RS01085 PF00682 HMGL-like BIF_RS01090 PF17092 Penicillin-binding protein OB-like domain BIF_RS01090 PF00912 Transglycosylase BIF_RS01090 PF00905 Penicillin binding protein transpeptidase domain BIF_RS01095 PF01658 Myo-inositol-1-phosphate synthase BIF_RS01110 PF01131 DNA topoisomerase BIF_RS01110 PF13368 Topoisomerase C-terminal repeat BIF_RS01110 PF01751 Toprim domain BIF_RS01115 PF02223 Thymidylate kinase BIF_RS01120 PF12169 DNA polymerase III subunits gamma and tau domain III BIF_RS01130 PF03577 Peptidase family C69 BIF_RS01135 PF03577 Peptidase family C69 BIF_RS01145 PF01268 Formate--tetrahydrofolate ligase BIF_RS01170 PF00300 Histidine phosphatase superfamily (branch 1) BIF_RS01185 PF00749 tRNA synthetases class I (E and Q), catalytic domain BIF_RS01210 PF00330 Aconitase family (aconitate hydratase) BIF_RS01215 PF00694 Aconitase C-terminal domain BIF_RS01225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BIF_RS01225 PF07992 Pyridine nucleotide-disulphide oxidoreductase BIF_RS01230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BIF_RS01240 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BIF_RS01240 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BIF_RS01245 PF07478 D-ala D-ala ligase C-terminus BIF_RS01245 PF01820 D-ala D-ala ligase N-terminus BIF_RS01280 PF00155 Aminotransferase class I and II BIF_RS01295 PF01467 Cytidylyltransferase-like BIF_RS01295 PF00294 pfkB family carbohydrate kinase BIF_RS01300 PF00830 Ribosomal L28 family BIF_RS01305 PF00271 Helicase conserved C-terminal domain BIF_RS01305 PF00270 DEAD/DEAH box helicase BIF_RS01305 PF17191 RecG wedge domain BIF_RS01325 PF01746 tRNA (Guanine-1)-methyltransferase BIF_RS01330 PF01782 RimM N-terminal domain BIF_RS01340 PF00886 Ribosomal protein S16 BIF_RS01345 PF02929 Beta galactosidase small chain BIF_RS01345 PF02837 Glycosyl hydrolases family 2, sugar binding domain BIF_RS01345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BIF_RS01345 PF00703 Glycosyl hydrolases family 2 BIF_RS01345 PF16353 Domain of unknown function(DUF4981) BIF_RS01360 PF02881 SRP54-type protein, helical bundle domain BIF_RS01360 PF02978 Signal peptide binding domain BIF_RS01360 PF00448 SRP54-type protein, GTPase domain BIF_RS01365 PF09190 DALR domain BIF_RS01365 PF01406 tRNA synthetases class I (C) catalytic domain BIF_RS01370 PF12848 ABC transporter BIF_RS01370 PF16326 ABC transporter C-terminal domain BIF_RS01370 PF00005 ABC transporter BIF_RS01375 PF00117 Glutamine amidotransferase class-I BIF_RS01380 PF10369 Small subunit of acetolactate synthase BIF_RS01385 PF00205 Thiamine pyrophosphate enzyme, central domain BIF_RS01385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BIF_RS01385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BIF_RS01390 PF14622 Ribonuclease-III-like BIF_RS01390 PF00035 Double-stranded RNA binding motif BIF_RS01395 PF01783 Ribosomal L32p protein family BIF_RS01400 PF02620 Large ribosomal RNA subunit accumulation protein YceD BIF_RS01410 PF01467 Cytidylyltransferase-like BIF_RS01420 PF00248 Aldo/keto reductase family BIF_RS01425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BIF_RS01425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BIF_RS01435 PF01138 3' exoribonuclease family, domain 1 BIF_RS01435 PF03725 3' exoribonuclease family, domain 2 BIF_RS01440 PF01725 Ham1 family BIF_RS01465 PF01050 Mannose-6-phosphate isomerase BIF_RS01465 PF00483 Nucleotidyl transferase BIF_RS01470 PF00342 Phosphoglucose isomerase BIF_RS01475 PF01245 Ribosomal protein L19 BIF_RS01480 PF10502 Signal peptidase, peptidase S26 BIF_RS01485 PF01351 Ribonuclease HII BIF_RS01490 PF00005 ABC transporter BIF_RS01505 PF07687 Peptidase dimerisation domain BIF_RS01505 PF01546 Peptidase family M20/M25/M40 BIF_RS01510 PF10150 Ribonuclease E/G family BIF_RS01515 PF00829 Ribosomal prokaryotic L21 protein BIF_RS01520 PF01016 Ribosomal L27 protein BIF_RS01525 PF01926 50S ribosome-binding GTPase BIF_RS01525 PF01018 GTP1/OBG BIF_RS01525 PF09269 Domain of unknown function (DUF1967) BIF_RS01530 PF00696 Amino acid kinase family BIF_RS01530 PF01472 PUA domain BIF_RS01535 PF00155 Aminotransferase class I and II BIF_RS01550 PF02357 Transcription termination factor nusG BIF_RS01555 PF00298 Ribosomal protein L11, RNA binding domain BIF_RS01555 PF03946 Ribosomal protein L11, N-terminal domain BIF_RS01560 PF00687 Ribosomal protein L1p/L10e family BIF_RS01565 PF13556 PucR C-terminal helix-turn-helix domain BIF_RS01565 PF17853 GGDEF-like domain BIF_RS01570 PF02237 Biotin protein ligase C terminal domain BIF_RS01570 PF03099 Biotin/lipoate A/B protein ligase family BIF_RS01575 PF02632 BioY family BIF_RS01580 PF02785 Biotin carboxylase C-terminal domain BIF_RS01580 PF00289 Biotin carboxylase, N-terminal domain BIF_RS01580 PF00364 Biotin-requiring enzyme BIF_RS01580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BIF_RS01585 PF01039 Carboxyl transferase domain BIF_RS01595 PF01648 4'-phosphopantetheinyl transferase superfamily BIF_RS01610 PF00056 lactate/malate dehydrogenase, NAD binding domain BIF_RS01610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BIF_RS01615 PF00312 Ribosomal protein S15 BIF_RS01620 PF00575 S1 RNA binding domain BIF_RS01620 PF00013 KH domain BIF_RS01620 PF01138 3' exoribonuclease family, domain 1 BIF_RS01620 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BIF_RS01625 PF04011 LemA family BIF_RS01635 PF00268 Ribonucleotide reductase, small chain BIF_RS01640 PF02867 Ribonucleotide reductase, barrel domain BIF_RS01640 PF00317 Ribonucleotide reductase, all-alpha domain BIF_RS01640 PF08343 Ribonucleotide reductase N-terminal BIF_RS01645 PF07972 NrdI Flavodoxin like BIF_RS01650 PF00462 Glutaredoxin BIF_RS01655 PF00248 Aldo/keto reductase family BIF_RS01660 PF16325 Peptidase family U32 C-terminal domain BIF_RS01660 PF01136 Peptidase family U32 BIF_RS01665 PF02578 Multi-copper polyphenol oxidoreductase laccase BIF_RS01670 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BIF_RS01675 PF01470 Pyroglutamyl peptidase BIF_RS01685 PF03051 Peptidase C1-like family BIF_RS01690 PF00793 DAHP synthetase I family BIF_RS01695 PF01757 Acyltransferase family BIF_RS01700 PF00793 DAHP synthetase I family BIF_RS01705 PF01048 Phosphorylase superfamily BIF_RS01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS01710 PF00512 His Kinase A (phospho-acceptor) domain BIF_RS01715 PF00486 Transcriptional regulatory protein, C terminal BIF_RS01715 PF00072 Response regulator receiver domain BIF_RS01720 PF12849 PBP superfamily domain BIF_RS01725 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS01730 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS01735 PF00005 ABC transporter BIF_RS01740 PF00860 Permease family BIF_RS01750 PF00466 Ribosomal protein L10 BIF_RS01755 PF16320 Ribosomal protein L7/L12 dimerisation domain BIF_RS01755 PF00542 Ribosomal protein L7/L12 C-terminal domain BIF_RS01800 PF00166 Chaperonin 10 Kd subunit BIF_RS01820 PF00471 Ribosomal protein L33 BIF_RS01825 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BIF_RS01825 PF01565 FAD binding domain BIF_RS01830 PF13520 Amino acid permease BIF_RS01835 PF00037 4Fe-4S binding domain BIF_RS01840 PF00155 Aminotransferase class I and II BIF_RS01845 PF11798 IMS family HHH motif BIF_RS01845 PF00817 impB/mucB/samB family BIF_RS01845 PF11799 impB/mucB/samB family C-terminal domain BIF_RS01855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BIF_RS01855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BIF_RS01860 PF01205 Uncharacterized protein family UPF0029 BIF_RS01860 PF09186 Domain of unknown function (DUF1949) BIF_RS01870 PF02446 4-alpha-glucanotransferase BIF_RS01875 PF00572 Ribosomal protein L13 BIF_RS01880 PF00380 Ribosomal protein S9/S16 BIF_RS01885 PF00128 Alpha amylase, catalytic domain BIF_RS01885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BIF_RS01890 PF00480 ROK family BIF_RS01895 PF00465 Iron-containing alcohol dehydrogenase BIF_RS01895 PF00171 Aldehyde dehydrogenase family BIF_RS01910 PF00338 Ribosomal protein S10p/S20e BIF_RS01915 PF00297 Ribosomal protein L3 BIF_RS01920 PF00573 Ribosomal protein L4/L1 family BIF_RS01925 PF00276 Ribosomal protein L23 BIF_RS01930 PF00181 Ribosomal Proteins L2, RNA binding domain BIF_RS01930 PF03947 Ribosomal Proteins L2, C-terminal domain BIF_RS01935 PF00203 Ribosomal protein S19 BIF_RS01940 PF00237 Ribosomal protein L22p/L17e BIF_RS01945 PF00189 Ribosomal protein S3, C-terminal domain BIF_RS01945 PF07650 KH domain BIF_RS01950 PF00252 Ribosomal protein L16p/L10e BIF_RS01955 PF00831 Ribosomal L29 protein BIF_RS01960 PF00366 Ribosomal protein S17 BIF_RS01965 PF00238 Ribosomal protein L14p/L23e BIF_RS01970 PF00467 KOW motif BIF_RS01970 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BIF_RS01975 PF00281 Ribosomal protein L5 BIF_RS01975 PF00673 ribosomal L5P family C-terminus BIF_RS01980 PF00253 Ribosomal protein S14p/S29e BIF_RS01985 PF00410 Ribosomal protein S8 BIF_RS01990 PF00347 Ribosomal protein L6 BIF_RS01995 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BIF_RS02000 PF00333 Ribosomal protein S5, N-terminal domain BIF_RS02000 PF03719 Ribosomal protein S5, C-terminal domain BIF_RS02005 PF00327 Ribosomal protein L30p/L7e BIF_RS02010 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BIF_RS02015 PF00344 SecY translocase BIF_RS02025 PF01176 Translation initiation factor 1A / IF-1 BIF_RS02030 PF00444 Ribosomal protein L36 BIF_RS02035 PF00416 Ribosomal protein S13/S18 BIF_RS02040 PF00411 Ribosomal protein S11 BIF_RS02045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BIF_RS02045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BIF_RS02045 PF01000 RNA polymerase Rpb3/RpoA insert domain BIF_RS02050 PF01196 Ribosomal protein L17 BIF_RS02055 PF01416 tRNA pseudouridine synthase BIF_RS02070 PF08529 NusA N-terminal domain BIF_RS02070 PF13184 NusA-like KH domain BIF_RS02075 PF04760 Translation initiation factor IF-2, N-terminal region BIF_RS02075 PF00009 Elongation factor Tu GTP binding domain BIF_RS02075 PF11987 Translation-initiation factor 2 BIF_RS02080 PF02033 Ribosome-binding factor A BIF_RS02085 PF01509 TruB family pseudouridylate synthase (N terminal domain) BIF_RS02085 PF16198 tRNA pseudouridylate synthase B C-terminal domain BIF_RS02085 PF09142 tRNA Pseudouridine synthase II, C terminal BIF_RS02090 PF06574 FAD synthetase BIF_RS02090 PF01687 Riboflavin kinase BIF_RS02095 PF18073 Rubredoxin metal binding domain BIF_RS02110 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BIF_RS02115 PF00075 RNase H BIF_RS02125 PF02403 Seryl-tRNA synthetase N-terminal domain BIF_RS02125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BIF_RS02130 PF00781 Diacylglycerol kinase catalytic domain BIF_RS02130 PF02142 MGS-like domain BIF_RS02135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BIF_RS02135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BIF_RS02135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BIF_RS02135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BIF_RS02155 PF00072 Response regulator receiver domain BIF_RS02155 PF00196 Bacterial regulatory proteins, luxR family BIF_RS02175 PF01053 Cys/Met metabolism PLP-dependent enzyme BIF_RS02180 PF01053 Cys/Met metabolism PLP-dependent enzyme BIF_RS02185 PF01053 Cys/Met metabolism PLP-dependent enzyme BIF_RS02195 PF00152 tRNA synthetases class II (D, K and N) BIF_RS02195 PF01336 OB-fold nucleic acid binding domain BIF_RS02210 PF03051 Peptidase C1-like family BIF_RS02215 PF13520 Amino acid permease BIF_RS02225 PF00324 Amino acid permease BIF_RS02230 PF01040 UbiA prenyltransferase family BIF_RS02235 PF00300 Histidine phosphatase superfamily (branch 1) BIF_RS02240 PF06100 MCRA family BIF_RS02245 PF00107 Zinc-binding dehydrogenase BIF_RS02245 PF08240 Alcohol dehydrogenase GroES-like domain BIF_RS02250 PF16197 Ketoacyl-synthetase C-terminal extension BIF_RS02250 PF14765 Polyketide synthase dehydratase BIF_RS02250 PF08659 KR domain BIF_RS02250 PF00550 Phosphopantetheine attachment site BIF_RS02250 PF00109 Beta-ketoacyl synthase, N-terminal domain BIF_RS02250 PF00698 Acyl transferase domain BIF_RS02250 PF02801 Beta-ketoacyl synthase, C-terminal domain BIF_RS02250 PF08240 Alcohol dehydrogenase GroES-like domain BIF_RS02255 PF01238 Phosphomannose isomerase type I BIF_RS02265 PF00512 His Kinase A (phospho-acceptor) domain BIF_RS02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS02270 PF01895 PhoU domain BIF_RS02275 PF00266 Aminotransferase class-V BIF_RS02280 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BIF_RS02280 PF05257 CHAP domain BIF_RS02285 PF01476 LysM domain BIF_RS02285 PF00877 NlpC/P60 family BIF_RS02290 PF00582 Universal stress protein family BIF_RS02295 PF02566 OsmC-like protein BIF_RS02300 PF00303 Thymidylate synthase BIF_RS02305 PF00186 Dihydrofolate reductase BIF_RS02310 PF01451 Low molecular weight phosphotyrosine protein phosphatase BIF_RS02315 PF16363 GDP-mannose 4,6 dehydratase BIF_RS02320 PF02390 Putative methyltransferase BIF_RS02385 PF04343 Protein of unknown function, DUF488 BIF_RS02390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BIF_RS02395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BIF_RS02395 PF00703 Glycosyl hydrolases family 2 BIF_RS02395 PF02837 Glycosyl hydrolases family 2, sugar binding domain BIF_RS02395 PF16353 Domain of unknown function(DUF4981) BIF_RS02395 PF02929 Beta galactosidase small chain BIF_RS02400 PF00356 Bacterial regulatory proteins, lacI family BIF_RS02425 PF01547 Bacterial extracellular solute-binding protein BIF_RS02430 PF02449 Beta-galactosidase BIF_RS02430 PF08533 Beta-galactosidase C-terminal domain BIF_RS02430 PF08532 Beta-galactosidase trimerisation domain BIF_RS02435 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS02440 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS02445 PF00356 Bacterial regulatory proteins, lacI family BIF_RS02465 PF00535 Glycosyl transferase family 2 BIF_RS02470 PF01594 AI-2E family transporter BIF_RS02480 PF00005 ABC transporter BIF_RS02480 PF13732 Domain of unknown function (DUF4162) BIF_RS02495 PF09179 TilS substrate binding domain BIF_RS02495 PF01171 PP-loop family BIF_RS02500 PF01171 PP-loop family BIF_RS02500 PF11734 TilS substrate C-terminal domain BIF_RS02500 PF00156 Phosphoribosyl transferase domain BIF_RS02505 PF00004 ATPase family associated with various cellular activities (AAA) BIF_RS02505 PF17862 AAA+ lid domain BIF_RS02505 PF01434 Peptidase family M41 BIF_RS02525 PF00005 ABC transporter BIF_RS02525 PF12848 ABC transporter BIF_RS02530 PF01327 Polypeptide deformylase BIF_RS02535 PF01053 Cys/Met metabolism PLP-dependent enzyme BIF_RS02560 PF01197 Ribosomal protein L31 BIF_RS02565 PF01261 Xylose isomerase-like TIM barrel BIF_RS02570 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BIF_RS02570 PF04616 Glycosyl hydrolases family 43 BIF_RS02575 PF00356 Bacterial regulatory proteins, lacI family BIF_RS02580 PF01547 Bacterial extracellular solute-binding protein BIF_RS02585 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS02595 PF04616 Glycosyl hydrolases family 43 BIF_RS02595 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BIF_RS02605 PF00135 Carboxylesterase family BIF_RS02615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BIF_RS02615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BIF_RS02620 PF00480 ROK family BIF_RS02625 PF01197 Ribosomal protein L31 BIF_RS02630 PF00472 RF-1 domain BIF_RS02630 PF03462 PCRF domain BIF_RS02635 PF17827 PrmC N-terminal domain BIF_RS02640 PF01300 Telomere recombination BIF_RS02645 PF00953 Glycosyl transferase family 4 BIF_RS02650 PF00571 CBS domain BIF_RS02650 PF00478 IMP dehydrogenase / GMP reductase domain BIF_RS02655 PF00929 Exonuclease BIF_RS02665 PF05970 PIF1-like helicase BIF_RS02665 PF14493 Helix-turn-helix domain BIF_RS02675 PF04073 Aminoacyl-tRNA editing domain BIF_RS02675 PF03129 Anticodon binding domain BIF_RS02675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BIF_RS02685 PF05649 Peptidase family M13 BIF_RS02685 PF01431 Peptidase family M13 BIF_RS02695 PF00557 Metallopeptidase family M24 BIF_RS02700 PF00285 Citrate synthase, C-terminal domain BIF_RS02705 PF02590 Predicted SPOUT methyltransferase BIF_RS02710 PF14602 Hexapeptide repeat of succinyl-transferase BIF_RS02710 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BIF_RS02715 PF03462 PCRF domain BIF_RS02715 PF00472 RF-1 domain BIF_RS02720 PF00005 ABC transporter BIF_RS02725 PF18075 FtsX extracellular domain BIF_RS02725 PF02687 FtsX-like permease family BIF_RS02730 PF01476 LysM domain BIF_RS02730 PF05257 CHAP domain BIF_RS02735 PF01668 SmpB protein BIF_RS02745 PF00497 Bacterial extracellular solute-binding proteins, family 3 BIF_RS02750 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS02755 PF00005 ABC transporter BIF_RS02765 PF00497 Bacterial extracellular solute-binding proteins, family 3 BIF_RS02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS02765 PF00512 His Kinase A (phospho-acceptor) domain BIF_RS02765 PF00072 Response regulator receiver domain BIF_RS02770 PF01380 SIS domain BIF_RS02775 PF00849 RNA pseudouridylate synthase BIF_RS02785 PF03309 Type III pantothenate kinase BIF_RS02790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BIF_RS02795 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS02800 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS02805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BIF_RS02805 PF00005 ABC transporter BIF_RS02810 PF00005 ABC transporter BIF_RS02810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BIF_RS02815 PF01053 Cys/Met metabolism PLP-dependent enzyme BIF_RS02820 PF00291 Pyridoxal-phosphate dependent enzyme BIF_RS02820 PF00571 CBS domain BIF_RS02825 PF00270 DEAD/DEAH box helicase BIF_RS02825 PF16124 RecQ zinc-binding BIF_RS02825 PF00271 Helicase conserved C-terminal domain BIF_RS02825 PF00570 HRDC domain BIF_RS02825 PF09382 RQC domain BIF_RS02870 PF00293 NUDIX domain BIF_RS02910 PF00465 Iron-containing alcohol dehydrogenase BIF_RS02915 PF02664 S-Ribosylhomocysteinase (LuxS) BIF_RS02925 PF01168 Alanine racemase, N-terminal domain BIF_RS02925 PF00842 Alanine racemase, C-terminal domain BIF_RS02930 PF13662 Toprim domain BIF_RS02930 PF01807 CHC2 zinc finger BIF_RS02930 PF10410 DnaB-helicase binding domain of primase BIF_RS02930 PF08278 DNA primase DnaG DnaB-binding BIF_RS02930 PF08275 DNA primase catalytic core, N-terminal domain BIF_RS02935 PF03600 Citrate transporter BIF_RS02945 PF02780 Transketolase, C-terminal domain BIF_RS02945 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BIF_RS02945 PF02779 Transketolase, pyrimidine binding domain BIF_RS02950 PF00731 AIR carboxylase BIF_RS02955 PF02222 ATP-grasp domain BIF_RS02955 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BIF_RS02960 PF01475 Ferric uptake regulator family BIF_RS02965 PF09924 Uncharacterised conserved protein (DUF2156) BIF_RS02970 PF00756 Putative esterase BIF_RS02975 PF02844 Phosphoribosylglycinamide synthetase, N domain BIF_RS02975 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BIF_RS02975 PF02843 Phosphoribosylglycinamide synthetase, C domain BIF_RS02980 PF02769 AIR synthase related protein, C-terminal domain BIF_RS02980 PF00586 AIR synthase related protein, N-terminal domain BIF_RS02985 PF00156 Phosphoribosyl transferase domain BIF_RS02985 PF13537 Glutamine amidotransferase domain BIF_RS02990 PF00817 impB/mucB/samB family BIF_RS02990 PF11798 IMS family HHH motif BIF_RS02990 PF11799 impB/mucB/samB family C-terminal domain BIF_RS03000 PF01926 50S ribosome-binding GTPase BIF_RS03000 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BIF_RS03045 PF02769 AIR synthase related protein, C-terminal domain BIF_RS03045 PF00586 AIR synthase related protein, N-terminal domain BIF_RS03045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BIF_RS03050 PF01259 SAICAR synthetase BIF_RS03055 PF02222 ATP-grasp domain BIF_RS03075 PF00164 Ribosomal protein S12/S23 BIF_RS03080 PF00177 Ribosomal protein S7p/S5e BIF_RS03085 PF00009 Elongation factor Tu GTP binding domain BIF_RS03085 PF03144 Elongation factor Tu domain 2 BIF_RS03085 PF03764 Elongation factor G, domain IV BIF_RS03085 PF14492 Elongation Factor G, domain II BIF_RS03085 PF00679 Elongation factor G C-terminus BIF_RS03090 PF03144 Elongation factor Tu domain 2 BIF_RS03090 PF00009 Elongation factor Tu GTP binding domain BIF_RS03090 PF03143 Elongation factor Tu C-terminal domain BIF_RS03105 PF01132 Elongation factor P (EF-P) OB domain BIF_RS03105 PF08207 Elongation factor P (EF-P) KOW-like domain BIF_RS03105 PF09285 Elongation factor P, C-terminal BIF_RS03110 PF01029 NusB family BIF_RS03115 PF00117 Glutamine amidotransferase class-I BIF_RS03115 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BIF_RS03120 PF02142 MGS-like domain BIF_RS03120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BIF_RS03120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BIF_RS03125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BIF_RS03130 PF00625 Guanylate kinase BIF_RS03135 PF00920 Dehydratase family BIF_RS03140 PF01192 RNA polymerase Rpb6 BIF_RS03145 PF00438 S-adenosylmethionine synthetase, N-terminal domain BIF_RS03145 PF02772 S-adenosylmethionine synthetase, central domain BIF_RS03145 PF02773 S-adenosylmethionine synthetase, C-terminal domain BIF_RS03160 PF00551 Formyl transferase BIF_RS03160 PF02911 Formyl transferase, C-terminal domain BIF_RS03170 PF09335 SNARE associated Golgi protein BIF_RS03175 PF17758 Proteasomal ATPase OB N-terminal domain BIF_RS03175 PF00004 ATPase family associated with various cellular activities (AAA) BIF_RS03175 PF16450 Proteasomal ATPase OB C-terminal domain BIF_RS03180 PF03136 Pup-ligase protein BIF_RS03185 PF00459 Inositol monophosphatase family BIF_RS03190 PF05639 Pup-like protein BIF_RS03195 PF03136 Pup-ligase protein BIF_RS03200 PF00216 Bacterial DNA-binding protein BIF_RS03210 PF00206 Lyase BIF_RS03210 PF08328 Adenylosuccinate lyase C-terminal BIF_RS03230 PF00092 von Willebrand factor type A domain BIF_RS03250 PF17863 AAA lid domain BIF_RS03250 PF07726 ATPase family associated with various cellular activities (AAA) BIF_RS03255 PF03167 Uracil DNA glycosylase superfamily BIF_RS03265 PF00313 'Cold-shock' DNA-binding domain BIF_RS03270 PF00118 TCP-1/cpn60 chaperonin family BIF_RS03285 PF00486 Transcriptional regulatory protein, C terminal BIF_RS03285 PF00072 Response regulator receiver domain BIF_RS03290 PF00672 HAMP domain BIF_RS03290 PF00512 His Kinase A (phospho-acceptor) domain BIF_RS03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS03295 PF00313 'Cold-shock' DNA-binding domain BIF_RS03300 PF11228 Protein of unknown function (DUF3027) BIF_RS03310 PF00582 Universal stress protein family BIF_RS03315 PF07724 AAA domain (Cdc48 subfamily) BIF_RS03315 PF17871 AAA lid domain BIF_RS03315 PF00004 ATPase family associated with various cellular activities (AAA) BIF_RS03315 PF02861 Clp amino terminal domain, pathogenicity island component BIF_RS03315 PF10431 C-terminal, D2-small domain, of ClpB protein BIF_RS03320 PF01336 OB-fold nucleic acid binding domain BIF_RS03320 PF02938 GAD domain BIF_RS03320 PF00152 tRNA synthetases class II (D, K and N) BIF_RS03325 PF03129 Anticodon binding domain BIF_RS03325 PF13393 Histidyl-tRNA synthetase BIF_RS03330 PF03993 Domain of Unknown Function (DUF349) BIF_RS03340 PF00005 ABC transporter BIF_RS03345 PF00497 Bacterial extracellular solute-binding proteins, family 3 BIF_RS03350 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS03355 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS03360 PF03976 Polyphosphate kinase 2 (PPK2) BIF_RS03365 PF00271 Helicase conserved C-terminal domain BIF_RS03365 PF00270 DEAD/DEAH box helicase BIF_RS03365 PF08148 DSHCT (NUC185) domain BIF_RS03370 PF12002 MgsA AAA+ ATPase C terminal BIF_RS03370 PF16193 AAA C-terminal domain BIF_RS03370 PF00004 ATPase family associated with various cellular activities (AAA) BIF_RS03375 PF07690 Major Facilitator Superfamily BIF_RS03380 PF00501 AMP-binding enzyme BIF_RS03385 PF00872 Transposase, Mutator family BIF_RS03415 PF03070 TENA/THI-4/PQQC family BIF_RS03425 PF00248 Aldo/keto reductase family BIF_RS03430 PF00005 ABC transporter BIF_RS03430 PF02361 Cobalt transport protein BIF_RS03440 PF00480 ROK family BIF_RS03445 PF00155 Aminotransferase class I and II BIF_RS03450 PF00005 ABC transporter BIF_RS03465 PF03120 NAD-dependent DNA ligase OB-fold domain BIF_RS03465 PF00533 BRCA1 C Terminus (BRCT) domain BIF_RS03465 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BIF_RS03465 PF01653 NAD-dependent DNA ligase adenylation domain BIF_RS03465 PF12826 Helix-hairpin-helix motif BIF_RS03470 PF10609 NUBPL iron-transfer P-loop NTPase BIF_RS03470 PF01883 Iron-sulfur cluster assembly protein BIF_RS03475 PF09819 ABC-type cobalt transport system, permease component BIF_RS03480 PF00120 Glutamine synthetase, catalytic domain BIF_RS03480 PF03951 Glutamine synthetase, beta-Grasp domain BIF_RS03490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BIF_RS03490 PF07992 Pyridine nucleotide-disulphide oxidoreductase BIF_RS03500 PF07687 Peptidase dimerisation domain BIF_RS03500 PF01546 Peptidase family M20/M25/M40 BIF_RS03535 PF09819 ABC-type cobalt transport system, permease component BIF_RS03540 PF00005 ABC transporter BIF_RS03545 PF00005 ABC transporter BIF_RS03550 PF12704 MacB-like periplasmic core domain BIF_RS03550 PF02687 FtsX-like permease family BIF_RS03560 PF00588 SpoU rRNA Methylase family BIF_RS03560 PF08032 RNA 2'-O ribose methyltransferase substrate binding BIF_RS03565 PF01409 tRNA synthetases class II core domain (F) BIF_RS03565 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BIF_RS03570 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BIF_RS03570 PF01588 Putative tRNA binding domain BIF_RS03570 PF03483 B3/4 domain BIF_RS03570 PF03484 tRNA synthetase B5 domain BIF_RS03570 PF03147 Ferredoxin-fold anticodon binding domain BIF_RS03580 PF02774 Semialdehyde dehydrogenase, dimerisation domain BIF_RS03580 PF01118 Semialdehyde dehydrogenase, NAD binding domain BIF_RS03585 PF01960 ArgJ family BIF_RS03590 PF00696 Amino acid kinase family BIF_RS03595 PF00202 Aminotransferase class-III BIF_RS03600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BIF_RS03600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BIF_RS03605 PF02863 Arginine repressor, C-terminal domain BIF_RS03605 PF01316 Arginine repressor, DNA binding domain BIF_RS03610 PF00764 Arginosuccinate synthase BIF_RS03615 PF00206 Lyase BIF_RS03615 PF14698 Argininosuccinate lyase C-terminal BIF_RS03630 PF01479 S4 domain BIF_RS03630 PF00579 tRNA synthetases class I (W and Y) BIF_RS03645 PF01728 FtsJ-like methyltransferase BIF_RS03645 PF01479 S4 domain BIF_RS03650 PF02386 Cation transport protein BIF_RS03655 PF02080 TrkA-C domain BIF_RS03655 PF02254 TrkA-N domain BIF_RS03660 PF01513 ATP-NAD kinase BIF_RS03665 PF02463 RecF/RecN/SMC N terminal domain BIF_RS03670 PF13419 Haloacid dehalogenase-like hydrolase BIF_RS03675 PF00291 Pyridoxal-phosphate dependent enzyme BIF_RS03675 PF14821 Threonine synthase N terminus BIF_RS03680 PF00171 Aldehyde dehydrogenase family BIF_RS03690 PF01467 Cytidylyltransferase-like BIF_RS03695 PF14572 Phosphoribosyl synthetase-associated domain BIF_RS03695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BIF_RS03705 PF12804 MobA-like NTP transferase domain BIF_RS03740 PF00300 Histidine phosphatase superfamily (branch 1) BIF_RS03745 PF01544 CorA-like Mg2+ transporter protein BIF_RS03755 PF09334 tRNA synthetases class I (M) BIF_RS03755 PF08264 Anticodon-binding domain of tRNA BIF_RS03755 PF13603 Leucyl-tRNA synthetase, Domain 2 BIF_RS03775 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BIF_RS03780 PF00814 Glycoprotease family BIF_RS03790 PF00814 Glycoprotease family BIF_RS03825 PF00180 Isocitrate/isopropylmalate dehydrogenase BIF_RS03830 PF00478 IMP dehydrogenase / GMP reductase domain BIF_RS03840 PF00501 AMP-binding enzyme BIF_RS03845 PF01327 Polypeptide deformylase BIF_RS03850 PF00318 Ribosomal protein S2 BIF_RS03855 PF00889 Elongation factor TS BIF_RS03860 PF00696 Amino acid kinase family BIF_RS03865 PF01765 Ribosome recycling factor BIF_RS03875 PF04055 Radical SAM superfamily BIF_RS03885 PF00005 ABC transporter BIF_RS03885 PF13732 Domain of unknown function (DUF4162) BIF_RS03895 PF00977 Histidine biosynthesis protein BIF_RS03900 PF01502 Phosphoribosyl-AMP cyclohydrolase BIF_RS03905 PF00425 chorismate binding enzyme BIF_RS03905 PF04715 Anthranilate synthase component I, N terminal region BIF_RS03910 PF03167 Uracil DNA glycosylase superfamily BIF_RS03925 PF00291 Pyridoxal-phosphate dependent enzyme BIF_RS03930 PF00290 Tryptophan synthase alpha chain BIF_RS03935 PF01790 Prolipoprotein diacylglyceryl transferase BIF_RS03940 PF00834 Ribulose-phosphate 3 epimerase family BIF_RS03945 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BIF_RS03950 PF08029 HisG, C-terminal domain BIF_RS03950 PF01634 ATP phosphoribosyltransferase BIF_RS03955 PF01066 CDP-alcohol phosphatidyltransferase BIF_RS03965 PF06947 Protein of unknown function (DUF1290) BIF_RS03975 PF00498 FHA domain BIF_RS03980 PF13411 MerR HTH family regulatory protein BIF_RS03990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BIF_RS03995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BIF_RS04005 PF13397 RNA polymerase-binding protein BIF_RS04010 PF00270 DEAD/DEAH box helicase BIF_RS04010 PF08148 DSHCT (NUC185) domain BIF_RS04010 PF00271 Helicase conserved C-terminal domain BIF_RS04035 PF01926 50S ribosome-binding GTPase BIF_RS04035 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BIF_RS04040 PF01479 S4 domain BIF_RS04040 PF00849 RNA pseudouridylate synthase BIF_RS04045 PF00230 Major intrinsic protein BIF_RS04050 PF02142 MGS-like domain BIF_RS04050 PF01808 AICARFT/IMPCHase bienzyme BIF_RS04060 PF00549 CoA-ligase BIF_RS04060 PF02629 CoA binding domain BIF_RS04065 PF08442 ATP-grasp domain BIF_RS04065 PF00549 CoA-ligase BIF_RS04070 PF00156 Phosphoribosyl transferase domain BIF_RS04080 PF05491 RuvB C-terminal winged helix domain BIF_RS04080 PF17864 RuvB AAA lid domain BIF_RS04080 PF05496 Holliday junction DNA helicase RuvB P-loop domain BIF_RS04085 PF07499 RuvA, C-terminal domain BIF_RS04085 PF01330 RuvA N terminal domain BIF_RS04090 PF02075 Crossover junction endodeoxyribonuclease RuvC BIF_RS04095 PF01709 Transcriptional regulator BIF_RS04100 PF13439 Glycosyltransferase Family 4 BIF_RS04105 PF03279 Bacterial lipid A biosynthesis acyltransferase BIF_RS04110 PF01066 CDP-alcohol phosphatidyltransferase BIF_RS04115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BIF_RS04115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BIF_RS04115 PF03129 Anticodon binding domain BIF_RS04120 PF00005 ABC transporter BIF_RS04120 PF12848 ABC transporter BIF_RS04130 PF00583 Acetyltransferase (GNAT) family BIF_RS04170 PF02673 Bacitracin resistance protein BacA BIF_RS04180 PF00226 DnaJ domain BIF_RS04180 PF00684 DnaJ central domain BIF_RS04180 PF01556 DnaJ C terminal domain BIF_RS04185 PF08220 DeoR-like helix-turn-helix domain BIF_RS04185 PF01628 HrcA protein C terminal domain BIF_RS04190 PF02779 Transketolase, pyrimidine binding domain BIF_RS04190 PF00456 Transketolase, thiamine diphosphate binding domain BIF_RS04190 PF02780 Transketolase, C-terminal domain BIF_RS04195 PF00923 Transaldolase/Fructose-6-phosphate aldolase BIF_RS04205 PF00155 Aminotransferase class I and II BIF_RS04215 PF00155 Aminotransferase class I and II BIF_RS04225 PF03840 Preprotein translocase SecG subunit BIF_RS04230 PF00121 Triosephosphate isomerase BIF_RS04235 PF00162 Phosphoglycerate kinase BIF_RS04240 PF02650 WhiA C-terminal HTH domain BIF_RS04240 PF14527 WhiA LAGLIDADG-like domain BIF_RS04245 PF03668 P-loop ATPase protein family BIF_RS04250 PF01488 Shikimate / quinate 5-dehydrogenase BIF_RS04250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BIF_RS04250 PF08501 Shikimate dehydrogenase substrate binding domain BIF_RS04255 PF01541 GIY-YIG catalytic domain BIF_RS04255 PF08459 UvrC Helix-hairpin-helix N-terminal BIF_RS04255 PF02151 UvrB/uvrC motif BIF_RS04260 PF00005 ABC transporter BIF_RS04260 PF17760 UvrA interaction domain BIF_RS04260 PF17755 UvrA DNA-binding domain BIF_RS04280 PF00005 ABC transporter BIF_RS04280 PF16326 ABC transporter C-terminal domain BIF_RS04280 PF12848 ABC transporter BIF_RS04295 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BIF_RS04300 PF01256 Carbohydrate kinase BIF_RS04300 PF03853 YjeF-related protein N-terminus BIF_RS04305 PF00578 AhpC/TSA family BIF_RS04310 PF07992 Pyridine nucleotide-disulphide oxidoreductase BIF_RS04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BIF_RS04315 PF03466 LysR substrate binding domain BIF_RS04340 PF00293 NUDIX domain BIF_RS04340 PF13344 Haloacid dehalogenase-like hydrolase BIF_RS04350 PF00156 Phosphoribosyl transferase domain BIF_RS04355 PF01180 Dihydroorotate dehydrogenase BIF_RS04360 PF00175 Oxidoreductase NAD-binding domain BIF_RS04360 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BIF_RS04365 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BIF_RS04370 PF01979 Amidohydrolase family BIF_RS04375 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BIF_RS04375 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BIF_RS04380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BIF_RS04380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BIF_RS04385 PF13811 Domain of unknown function (DUF4186) BIF_RS04390 PF03710 Glutamate-ammonia ligase adenylyltransferase BIF_RS04390 PF08335 GlnD PII-uridylyltransferase BIF_RS04395 PF02219 Methylenetetrahydrofolate reductase BIF_RS04400 PF08267 Cobalamin-independent synthase, N-terminal domain BIF_RS04400 PF01717 Cobalamin-independent synthase, Catalytic domain BIF_RS04410 PF08704 tRNA methyltransferase complex GCD14 subunit BIF_RS04415 PF00005 ABC transporter BIF_RS04420 PF00534 Glycosyl transferases group 1 BIF_RS04420 PF13439 Glycosyltransferase Family 4 BIF_RS04435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BIF_RS04435 PF07992 Pyridine nucleotide-disulphide oxidoreductase BIF_RS04440 PF01645 Conserved region in glutamate synthase BIF_RS04440 PF04898 Glutamate synthase central domain BIF_RS04440 PF00310 Glutamine amidotransferases class-II BIF_RS04440 PF01493 GXGXG motif BIF_RS04445 PF04055 Radical SAM superfamily BIF_RS04450 PF00009 Elongation factor Tu GTP binding domain BIF_RS04450 PF00679 Elongation factor G C-terminus BIF_RS04450 PF03144 Elongation factor Tu domain 2 BIF_RS04450 PF06421 GTP-binding protein LepA C-terminus BIF_RS04455 PF01649 Ribosomal protein S20 BIF_RS04460 PF03458 UPF0126 domain BIF_RS04465 PF01063 Amino-transferase class IV BIF_RS04470 PF01386 Ribosomal L25p family BIF_RS04470 PF14693 Ribosomal protein TL5, C-terminal domain BIF_RS04480 PF02233 NAD(P) transhydrogenase beta subunit BIF_RS04485 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BIF_RS04490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BIF_RS04490 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BIF_RS04495 PF00501 AMP-binding enzyme BIF_RS04500 PF07650 KH domain BIF_RS04500 PF01926 50S ribosome-binding GTPase BIF_RS04505 PF01595 Cyclin M transmembrane N-terminal domain BIF_RS04505 PF00571 CBS domain BIF_RS04505 PF03471 Transporter associated domain BIF_RS04510 PF02130 Uncharacterized protein family UPF0054 BIF_RS04515 PF02562 PhoH-like protein BIF_RS04520 PF01230 HIT domain BIF_RS04525 PF04452 RNA methyltransferase BIF_RS04535 PF00588 SpoU rRNA Methylase family BIF_RS04545 PF00483 Nucleotidyl transferase BIF_RS04550 PF01883 Iron-sulfur cluster assembly protein BIF_RS04555 PF01592 NifU-like N terminal domain BIF_RS04560 PF00266 Aminotransferase class-V BIF_RS04565 PF00005 ABC transporter BIF_RS04570 PF01458 Uncharacterized protein family (UPF0051) BIF_RS04575 PF01458 Uncharacterized protein family (UPF0051) BIF_RS04580 PF17964 Bacterial Ig domain BIF_RS04580 PF03734 L,D-transpeptidase catalytic domain BIF_RS04585 PF00117 Glutamine amidotransferase class-I BIF_RS04585 PF06418 CTP synthase N-terminus BIF_RS04595 PF17999 Pullulanase N1-terminal domain BIF_RS04595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BIF_RS04595 PF00128 Alpha amylase, catalytic domain BIF_RS04600 PF02806 Alpha amylase, C-terminal all-beta domain BIF_RS04600 PF00128 Alpha amylase, catalytic domain BIF_RS04600 PF00686 Starch binding domain BIF_RS04605 PF02806 Alpha amylase, C-terminal all-beta domain BIF_RS04605 PF00128 Alpha amylase, catalytic domain BIF_RS04645 PF01220 Dehydroquinase class II BIF_RS04650 PF01202 Shikimate kinase BIF_RS04650 PF01761 3-dehydroquinate synthase BIF_RS04655 PF01264 Chorismate synthase BIF_RS04670 PF03652 Holliday junction resolvase BIF_RS04675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BIF_RS04675 PF01411 tRNA synthetases class II (A) BIF_RS04675 PF02272 DHHA1 domain BIF_RS04690 PF00300 Histidine phosphatase superfamily (branch 1) BIF_RS04695 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BIF_RS04700 PF01479 S4 domain BIF_RS04700 PF00163 Ribosomal protein S4/S9 N-terminal domain BIF_RS04705 PF13361 UvrD-like helicase C-terminal domain BIF_RS04705 PF00580 UvrD/REP helicase N-terminal domain BIF_RS04705 PF13361 UvrD-like helicase C-terminal domain BIF_RS04705 PF00580 UvrD/REP helicase N-terminal domain BIF_RS04710 PF00156 Phosphoribosyl transferase domain BIF_RS04715 PF00860 Permease family BIF_RS04725 PF00155 Aminotransferase class I and II BIF_RS04730 PF00155 Aminotransferase class I and II BIF_RS04740 PF00128 Alpha amylase, catalytic domain BIF_RS04740 PF09154 Domain of unknown function (DUF1939) BIF_RS04745 PF07722 Peptidase C26 BIF_RS04760 PF00005 ABC transporter BIF_RS04765 PF00392 Bacterial regulatory proteins, gntR family BIF_RS04770 PF01381 Helix-turn-helix BIF_RS04775 PF00962 Adenosine/AMP deaminase BIF_RS04810 PF00679 Elongation factor G C-terminus BIF_RS04810 PF03764 Elongation factor G, domain IV BIF_RS04810 PF14492 Elongation Factor G, domain II BIF_RS04810 PF00009 Elongation factor Tu GTP binding domain BIF_RS04815 PF05598 Transposase domain (DUF772) BIF_RS04815 PF01609 Transposase DDE domain BIF_RS04825 PF00958 GMP synthase C terminal domain BIF_RS04825 PF02540 NAD synthase BIF_RS04825 PF00117 Glutamine amidotransferase class-I BIF_RS04830 PF09363 XFP C-terminal domain BIF_RS04830 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BIF_RS04830 PF09364 XFP N-terminal domain BIF_RS04835 PF07085 DRTGG domain BIF_RS04835 PF01515 Phosphate acetyl/butaryl transferase BIF_RS04840 PF00871 Acetokinase family BIF_RS04845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BIF_RS04860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BIF_RS04860 PF00128 Alpha amylase, catalytic domain BIF_RS04870 PF01784 NIF3 (NGG1p interacting factor 3) BIF_RS04875 PF00476 DNA polymerase family A BIF_RS04875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BIF_RS04875 PF01367 5'-3' exonuclease, C-terminal SAM fold BIF_RS04880 PF00072 Response regulator receiver domain BIF_RS04880 PF03861 ANTAR domain BIF_RS04885 PF00293 NUDIX domain BIF_RS04895 PF02887 Pyruvate kinase, alpha/beta domain BIF_RS04895 PF00224 Pyruvate kinase, barrel domain BIF_RS04900 PF03741 Integral membrane protein TerC family BIF_RS04905 PF02151 UvrB/uvrC motif BIF_RS04905 PF04851 Type III restriction enzyme, res subunit BIF_RS04905 PF12344 Ultra-violet resistance protein B BIF_RS04905 PF00271 Helicase conserved C-terminal domain BIF_RS04905 PF17757 UvrB interaction domain BIF_RS04910 PF01121 Dephospho-CoA kinase BIF_RS04915 PF00575 S1 RNA binding domain BIF_RS04920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BIF_RS04920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BIF_RS04925 PF01297 Zinc-uptake complex component A periplasmic BIF_RS04930 PF00005 ABC transporter BIF_RS04935 PF00950 ABC 3 transport family BIF_RS04940 PF02542 YgbB family BIF_RS04945 PF02559 CarD-like/TRCF domain BIF_RS04950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BIF_RS04950 PF02806 Alpha amylase, C-terminal all-beta domain BIF_RS04950 PF00128 Alpha amylase, catalytic domain BIF_RS04955 PF00486 Transcriptional regulatory protein, C terminal BIF_RS04955 PF00072 Response regulator receiver domain BIF_RS04960 PF00672 HAMP domain BIF_RS04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS04960 PF00512 His Kinase A (phospho-acceptor) domain BIF_RS04990 PF03816 Cell envelope-related transcriptional attenuator domain BIF_RS04995 PF13399 LytR cell envelope-related transcriptional attenuator BIF_RS04995 PF03816 Cell envelope-related transcriptional attenuator domain BIF_RS05000 PF01580 FtsK/SpoIIIE family BIF_RS05000 PF12538 DNA transporter BIF_RS05005 PF02467 Transcription factor WhiB BIF_RS05010 PF07568 Histidine kinase BIF_RS05010 PF12282 Signal transduction histidine kinase BIF_RS05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS05015 PF03006 Haemolysin-III related BIF_RS05020 PF03449 Transcription elongation factor, N-terminal BIF_RS05020 PF01272 Transcription elongation factor, GreA/GreB, C-term BIF_RS05025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BIF_RS05030 PF03315 Serine dehydratase beta chain BIF_RS05030 PF03313 Serine dehydratase alpha chain BIF_RS05045 PF02541 Ppx/GppA phosphatase family BIF_RS05060 PF03952 Enolase, N-terminal domain BIF_RS05060 PF00113 Enolase, C-terminal TIM barrel domain BIF_RS05075 PF00005 ABC transporter BIF_RS05080 PF02559 CarD-like/TRCF domain BIF_RS05080 PF00271 Helicase conserved C-terminal domain BIF_RS05080 PF17757 UvrB interaction domain BIF_RS05080 PF03461 TRCF domain BIF_RS05080 PF00270 DEAD/DEAH box helicase BIF_RS05085 PF01195 Peptidyl-tRNA hydrolase BIF_RS05095 PF03699 Uncharacterised protein family (UPF0182) BIF_RS05100 PF00933 Glycosyl hydrolase family 3 N terminal domain BIF_RS05110 PF02554 Carbon starvation protein CstA BIF_RS05110 PF13722 5TM C-terminal transporter carbon starvation CstA BIF_RS05140 PF00206 Lyase BIF_RS05140 PF10415 Fumarase C C-terminus BIF_RS05150 PF07664 Ferrous iron transport protein B C terminus BIF_RS05150 PF17910 FeoB cytosolic helical domain BIF_RS05150 PF04023 FeoA domain BIF_RS05150 PF02421 Ferrous iron transport protein B BIF_RS05150 PF07670 Nucleoside recognition BIF_RS05160 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BIF_RS05160 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BIF_RS05170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BIF_RS05175 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BIF_RS05175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BIF_RS05180 PF03575 Peptidase family S51 BIF_RS05185 PF05525 Branched-chain amino acid transport protein BIF_RS05190 PF01625 Peptide methionine sulfoxide reductase BIF_RS05190 PF01641 SelR domain BIF_RS05190 PF08534 Redoxin BIF_RS05195 PF04945 YHS domain BIF_RS05205 PF00271 Helicase conserved C-terminal domain BIF_RS05205 PF00270 DEAD/DEAH box helicase BIF_RS05210 PF03601 Conserved hypothetical protein 698 BIF_RS05215 PF00860 Permease family BIF_RS05235 PF01926 50S ribosome-binding GTPase BIF_RS05235 PF06071 Protein of unknown function (DUF933) BIF_RS05240 PF03807 NADP oxidoreductase coenzyme F420-dependent BIF_RS05240 PF14748 Pyrroline-5-carboxylate reductase dimerisation BIF_RS05245 PF00561 alpha/beta hydrolase fold BIF_RS05250 PF07730 Histidine kinase BIF_RS05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS05255 PF00196 Bacterial regulatory proteins, luxR family BIF_RS05255 PF00072 Response regulator receiver domain BIF_RS05265 PF12704 MacB-like periplasmic core domain BIF_RS05265 PF02687 FtsX-like permease family BIF_RS05265 PF00005 ABC transporter BIF_RS05275 PF00005 ABC transporter BIF_RS05275 PF12558 ATP-binding cassette cobalt transporter BIF_RS05280 PF01053 Cys/Met metabolism PLP-dependent enzyme BIF_RS05290 PF02021 Uncharacterised protein family UPF0102 BIF_RS05295 PF13335 Magnesium chelatase, subunit ChlI C-terminal BIF_RS05295 PF01078 Magnesium chelatase, subunit ChlI BIF_RS05300 PF17782 DprA winged helix domain BIF_RS05300 PF02481 DNA recombination-mediator protein A BIF_RS05305 PF00890 FAD binding domain BIF_RS05305 PF02910 Fumarate reductase flavoprotein C-term BIF_RS05310 PF13085 2Fe-2S iron-sulfur cluster binding domain BIF_RS05325 PF06965 Na+/H+ antiporter 1 BIF_RS05330 PF00155 Aminotransferase class I and II BIF_RS05345 PF06689 ClpX C4-type zinc finger BIF_RS05345 PF07724 AAA domain (Cdc48 subfamily) BIF_RS05345 PF10431 C-terminal, D2-small domain, of ClpB protein BIF_RS05350 PF00574 Clp protease BIF_RS05355 PF00574 Clp protease BIF_RS05360 PF00654 Voltage gated chloride channel BIF_RS05365 PF05697 Bacterial trigger factor protein (TF) BIF_RS05365 PF05698 Bacterial trigger factor protein (TF) C-terminus BIF_RS05365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BIF_RS05375 PF04055 Radical SAM superfamily BIF_RS05380 PF02901 Pyruvate formate lyase-like BIF_RS05380 PF01228 Glycine radical BIF_RS05390 PF00795 Carbon-nitrogen hydrolase BIF_RS05390 PF02540 NAD synthase BIF_RS05395 PF07687 Peptidase dimerisation domain BIF_RS05395 PF01546 Peptidase family M20/M25/M40 BIF_RS05400 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS05405 PF09383 NIL domain BIF_RS05405 PF00005 ABC transporter BIF_RS05410 PF03180 NLPA lipoprotein BIF_RS05415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BIF_RS05420 PF02824 TGS domain BIF_RS05420 PF04607 Region found in RelA / SpoT proteins BIF_RS05420 PF13291 ACT domain BIF_RS05425 PF00692 dUTPase BIF_RS05445 PF03989 DNA gyrase C-terminal domain, beta-propeller BIF_RS05445 PF00521 DNA gyrase/topoisomerase IV, subunit A BIF_RS05450 PF06800 Sugar transport protein BIF_RS05455 PF08494 DEAD/H associated BIF_RS05455 PF00271 Helicase conserved C-terminal domain BIF_RS05455 PF00270 DEAD/DEAH box helicase BIF_RS05475 PF13439 Glycosyltransferase Family 4 BIF_RS05480 PF00986 DNA gyrase B subunit, carboxyl terminus BIF_RS05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BIF_RS05480 PF01751 Toprim domain BIF_RS05480 PF00204 DNA gyrase B BIF_RS05485 PF04542 Sigma-70 region 2 BIF_RS05485 PF04539 Sigma-70 region 3 BIF_RS05485 PF00140 Sigma-70 factor, region 1.2 BIF_RS05485 PF04545 Sigma-70, region 4 BIF_RS05495 PF00348 Polyprenyl synthetase BIF_RS05500 PF03793 PASTA domain BIF_RS05500 PF00069 Protein kinase domain BIF_RS05515 PF02885 Glycosyl transferase family, helical bundle domain BIF_RS05515 PF00591 Glycosyl transferase family, a/b domain BIF_RS05520 PF01043 SecA preprotein cross-linking domain BIF_RS05520 PF07516 SecA Wing and Scaffold domain BIF_RS05520 PF07517 SecA DEAD-like domain BIF_RS05520 PF02810 SEC-C motif BIF_RS05525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BIF_RS05525 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BIF_RS05535 PF02631 RecX family BIF_RS05540 PF00154 recA bacterial DNA recombination protein BIF_RS05555 PF02464 Competence-damaged protein BIF_RS05555 PF00994 Probable molybdopterin binding domain BIF_RS05555 PF18146 Damage-inducible protein CinA KH domain BIF_RS05560 PF01066 CDP-alcohol phosphatidyltransferase BIF_RS05565 PF09397 Ftsk gamma domain BIF_RS05565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BIF_RS05565 PF17854 FtsK alpha domain BIF_RS05565 PF01580 FtsK/SpoIIIE family BIF_RS05575 PF00919 Uncharacterized protein family UPF0004 BIF_RS05575 PF04055 Radical SAM superfamily BIF_RS05580 PF04607 Region found in RelA / SpoT proteins BIF_RS05585 PF01027 Inhibitor of apoptosis-promoting Bax1 BIF_RS05605 PF00005 ABC transporter BIF_RS05610 PF07730 Histidine kinase BIF_RS05615 PF00196 Bacterial regulatory proteins, luxR family BIF_RS05615 PF00072 Response regulator receiver domain BIF_RS05630 PF00128 Alpha amylase, catalytic domain BIF_RS05635 PF13416 Bacterial extracellular solute-binding protein BIF_RS05650 PF14602 Hexapeptide repeat of succinyl-transferase BIF_RS05650 PF12464 Maltose acetyltransferase BIF_RS05660 PF00330 Aconitase family (aconitate hydratase) BIF_RS05660 PF00694 Aconitase C-terminal domain BIF_RS05675 PF05958 tRNA (Uracil-5-)-methyltransferase BIF_RS05690 PF03372 Endonuclease/Exonuclease/phosphatase family BIF_RS05700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BIF_RS05700 PF00005 ABC transporter BIF_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS05705 PF12911 N-terminal TM domain of oligopeptide transport permease C BIF_RS05710 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS05715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BIF_RS05720 PF02899 Phage integrase, N-terminal SAM-like domain BIF_RS05720 PF00589 Phage integrase family BIF_RS05725 PF00005 ABC transporter BIF_RS05730 PF02687 FtsX-like permease family BIF_RS05730 PF12704 MacB-like periplasmic core domain BIF_RS05740 PF02153 Prephenate dehydrogenase BIF_RS05740 PF01842 ACT domain BIF_RS05745 PF01817 Chorismate mutase type II BIF_RS05745 PF00800 Prephenate dehydratase BIF_RS05745 PF01842 ACT domain BIF_RS05755 PF00009 Elongation factor Tu GTP binding domain BIF_RS05755 PF00679 Elongation factor G C-terminus BIF_RS05755 PF03144 Elongation factor Tu domain 2 BIF_RS05755 PF14492 Elongation Factor G, domain II BIF_RS05760 PF07690 Major Facilitator Superfamily BIF_RS05770 PF13614 AAA domain BIF_RS05775 PF00589 Phage integrase family BIF_RS05775 PF02899 Phage integrase, N-terminal SAM-like domain BIF_RS05780 PF00453 Ribosomal protein L20 BIF_RS05785 PF01632 Ribosomal protein L35 BIF_RS05790 PF05198 Translation initiation factor IF-3, N-terminal domain BIF_RS05790 PF00707 Translation initiation factor IF-3, C-terminal domain BIF_RS05800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BIF_RS05800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BIF_RS05805 PF04073 Aminoacyl-tRNA editing domain BIF_RS05810 PF02401 LytB protein BIF_RS05815 PF01263 Aldose 1-epimerase BIF_RS05825 PF04542 Sigma-70 region 2 BIF_RS05825 PF08281 Sigma-70, region 4 BIF_RS05830 PF08245 Mur ligase middle domain BIF_RS05830 PF02875 Mur ligase family, glutamate ligase domain BIF_RS05840 PF08245 Mur ligase middle domain BIF_RS05840 PF02875 Mur ligase family, glutamate ligase domain BIF_RS05845 PF00196 Bacterial regulatory proteins, luxR family BIF_RS05845 PF00072 Response regulator receiver domain BIF_RS05860 PF05195 Aminopeptidase P, N-terminal domain BIF_RS05860 PF00557 Metallopeptidase family M24 BIF_RS05865 PF00293 NUDIX domain BIF_RS05865 PF09297 NADH pyrophosphatase zinc ribbon domain BIF_RS05880 PF02580 D-Tyr-tRNA(Tyr) deacylase BIF_RS05885 PF14659 Phage integrase, N-terminal SAM-like domain BIF_RS05885 PF00589 Phage integrase family BIF_RS05960 PF00005 ABC transporter BIF_RS05960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BIF_RS05965 PF12911 N-terminal TM domain of oligopeptide transport permease C BIF_RS05965 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS05970 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS05980 PF08478 POTRA domain, FtsQ-type BIF_RS05980 PF03799 Cell division protein FtsQ BIF_RS05985 PF01225 Mur ligase family, catalytic domain BIF_RS05985 PF02875 Mur ligase family, glutamate ligase domain BIF_RS05985 PF08245 Mur ligase middle domain BIF_RS05990 PF03033 Glycosyltransferase family 28 N-terminal domain BIF_RS05990 PF04101 Glycosyltransferase family 28 C-terminal domain BIF_RS05995 PF01098 Cell cycle protein BIF_RS06000 PF02875 Mur ligase family, glutamate ligase domain BIF_RS06000 PF08245 Mur ligase middle domain BIF_RS06005 PF00953 Glycosyl transferase family 4 BIF_RS06010 PF02875 Mur ligase family, glutamate ligase domain BIF_RS06010 PF01225 Mur ligase family, catalytic domain BIF_RS06010 PF08245 Mur ligase middle domain BIF_RS06020 PF00905 Penicillin binding protein transpeptidase domain BIF_RS06020 PF03717 Penicillin-binding Protein dimerisation domain BIF_RS06030 PF01795 MraW methylase family BIF_RS06035 PF02381 MraZ protein, putative antitoxin-like BIF_RS06045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BIF_RS06045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BIF_RS06045 PF01842 ACT domain BIF_RS06050 PF03477 ATP cone domain BIF_RS06060 PF01726 LexA DNA binding domain BIF_RS06060 PF00717 Peptidase S24-like BIF_RS06065 PF01545 Cation efflux family BIF_RS06070 PF00056 lactate/malate dehydrogenase, NAD binding domain BIF_RS06070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BIF_RS06075 PF13167 GTP-binding GTPase N-terminal BIF_RS06075 PF16360 GTP-binding GTPase Middle Region BIF_RS06075 PF01926 50S ribosome-binding GTPase BIF_RS06080 PF08468 Methyltransferase small domain N-terminal BIF_RS06080 PF05175 Methyltransferase small domain BIF_RS06085 PF11898 Domain of unknown function (DUF3418) BIF_RS06085 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BIF_RS06085 PF00270 DEAD/DEAH box helicase BIF_RS06085 PF00271 Helicase conserved C-terminal domain BIF_RS06085 PF04408 Helicase associated domain (HA2) BIF_RS06090 PF00120 Glutamine synthetase, catalytic domain BIF_RS06090 PF03951 Glutamine synthetase, beta-Grasp domain BIF_RS06100 PF00977 Histidine biosynthesis protein BIF_RS06105 PF00117 Glutamine amidotransferase class-I BIF_RS06115 PF00475 Imidazoleglycerol-phosphate dehydratase BIF_RS06120 PF00155 Aminotransferase class I and II BIF_RS06125 PF00815 Histidinol dehydrogenase BIF_RS06130 PF14579 Helix-hairpin-helix motif BIF_RS06130 PF02811 PHP domain BIF_RS06130 PF07733 Bacterial DNA polymerase III alpha NTPase domain BIF_RS06130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BIF_RS06140 PF00849 RNA pseudouridylate synthase BIF_RS06145 PF01252 Signal peptidase (SPase) II BIF_RS06160 PF04472 Cell division protein SepF BIF_RS06165 PF12327 FtsZ family, C-terminal domain BIF_RS06165 PF00091 Tubulin/FtsZ family, GTPase domain BIF_RS06170 PF01207 Dihydrouridine synthase (Dus) BIF_RS06175 PF03129 Anticodon binding domain BIF_RS06175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BIF_RS06180 PF02110 Hydroxyethylthiazole kinase family BIF_RS06185 PF13667 ThiC-associated domain BIF_RS06185 PF01964 Radical SAM ThiC family BIF_RS06185 PF02581 Thiamine monophosphate synthase BIF_RS06190 PF01910 Thiamine-binding protein BIF_RS06195 PF00356 Bacterial regulatory proteins, lacI family BIF_RS06200 PF01306 LacY proton/sugar symporter BIF_RS06205 PF08244 Glycosyl hydrolases family 32 C terminal BIF_RS06205 PF00251 Glycosyl hydrolases family 32 N-terminal domain BIF_RS06210 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS06215 PF09084 NMT1/THI5 like BIF_RS06220 PF01156 Inosine-uridine preferring nucleoside hydrolase BIF_RS06230 PF01255 Putative undecaprenyl diphosphate synthase BIF_RS06235 PF11967 Recombination protein O N terminal BIF_RS06235 PF02565 Recombination protein O C terminal BIF_RS06245 PF04551 GcpE protein BIF_RS06250 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BIF_RS06250 PF13288 DXP reductoisomerase C-terminal domain BIF_RS06250 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BIF_RS06275 PF05362 Lon protease (S16) C-terminal proteolytic domain BIF_RS06275 PF13180 PDZ domain BIF_RS06285 PF13361 UvrD-like helicase C-terminal domain BIF_RS06285 PF00570 HRDC domain BIF_RS06285 PF00580 UvrD/REP helicase N-terminal domain BIF_RS06300 PF02811 PHP domain BIF_RS06310 PF01678 Diaminopimelate epimerase BIF_RS06315 PF01177 Asp/Glu/Hydantoin racemase BIF_RS06325 PF01145 SPFH domain / Band 7 family BIF_RS06335 PF00005 ABC transporter BIF_RS06340 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS06345 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS06350 PF00155 Aminotransferase class I and II BIF_RS06355 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS06360 PF09383 NIL domain BIF_RS06360 PF00005 ABC transporter BIF_RS06365 PF03180 NLPA lipoprotein BIF_RS06370 PF08546 Ketopantoate reductase PanE/ApbA C terminal BIF_RS06370 PF02558 Ketopantoate reductase PanE/ApbA BIF_RS06380 PF02811 PHP domain BIF_RS06380 PF00929 Exonuclease BIF_RS06380 PF14579 Helix-hairpin-helix motif BIF_RS06380 PF07733 Bacterial DNA polymerase III alpha NTPase domain BIF_RS06380 PF01336 OB-fold nucleic acid binding domain BIF_RS06380 PF11490 DNA polymerase III polC-type N-terminus II BIF_RS06380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BIF_RS06410 PF03764 Elongation factor G, domain IV BIF_RS06410 PF14492 Elongation Factor G, domain II BIF_RS06410 PF00679 Elongation factor G C-terminus BIF_RS06410 PF00009 Elongation factor Tu GTP binding domain BIF_RS06415 PF13520 Amino acid permease BIF_RS06430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BIF_RS06435 PF07690 Major Facilitator Superfamily BIF_RS06440 PF04012 PspA/IM30 family BIF_RS06450 PF08264 Anticodon-binding domain of tRNA BIF_RS06450 PF00133 tRNA synthetases class I (I, L, M and V) BIF_RS06460 PF13350 Tyrosine phosphatase family BIF_RS06475 PF00005 ABC transporter BIF_RS06475 PF00664 ABC transporter transmembrane region BIF_RS06480 PF00664 ABC transporter transmembrane region BIF_RS06480 PF00005 ABC transporter BIF_RS06495 PF03852 DNA mismatch endonuclease Vsr BIF_RS06530 PF09827 CRISPR associated protein Cas2 BIF_RS06535 PF01867 CRISPR associated protein Cas1 BIF_RS06535 PF01930 Domain of unknown function DUF83 BIF_RS06550 PF06736 Protein of unknown function (DUF1211) BIF_RS06570 PF13597 Anaerobic ribonucleoside-triphosphate reductase BIF_RS06570 PF03477 ATP cone domain BIF_RS06575 PF02601 Exonuclease VII, large subunit BIF_RS06575 PF13742 OB-fold nucleic acid binding domain BIF_RS06580 PF02609 Exonuclease VII small subunit BIF_RS06600 PF00155 Aminotransferase class I and II BIF_RS06605 PF03852 DNA mismatch endonuclease Vsr BIF_RS06620 PF01327 Polypeptide deformylase BIF_RS06625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BIF_RS06625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BIF_RS06625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BIF_RS06625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BIF_RS06630 PF01433 Peptidase family M1 domain BIF_RS06630 PF11838 ERAP1-like C-terminal domain BIF_RS06635 PF12706 Beta-lactamase superfamily domain BIF_RS06635 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BIF_RS06635 PF17770 Ribonuclease J C-terminal domain BIF_RS06640 PF00701 Dihydrodipicolinate synthetase family BIF_RS06645 PF01113 Dihydrodipicolinate reductase, N-terminus BIF_RS06645 PF05173 Dihydrodipicolinate reductase, C-terminus BIF_RS06660 PF00580 UvrD/REP helicase N-terminal domain BIF_RS06660 PF13361 UvrD-like helicase C-terminal domain BIF_RS06670 PF00069 Protein kinase domain BIF_RS06680 PF07726 ATPase family associated with various cellular activities (AAA) BIF_RS06680 PF17863 AAA lid domain BIF_RS06705 PF00623 RNA polymerase Rpb1, domain 2 BIF_RS06705 PF04997 RNA polymerase Rpb1, domain 1 BIF_RS06705 PF05000 RNA polymerase Rpb1, domain 4 BIF_RS06705 PF04983 RNA polymerase Rpb1, domain 3 BIF_RS06705 PF04998 RNA polymerase Rpb1, domain 5 BIF_RS06710 PF04560 RNA polymerase Rpb2, domain 7 BIF_RS06710 PF00562 RNA polymerase Rpb2, domain 6 BIF_RS06710 PF04563 RNA polymerase beta subunit BIF_RS06710 PF04565 RNA polymerase Rpb2, domain 3 BIF_RS06710 PF04561 RNA polymerase Rpb2, domain 2 BIF_RS06710 PF10385 RNA polymerase beta subunit external 1 domain BIF_RS06720 PF10576 Iron-sulfur binding domain of endonuclease III BIF_RS06720 PF00633 Helix-hairpin-helix motif BIF_RS06720 PF00730 HhH-GPD superfamily base excision DNA repair protein BIF_RS06725 PF00588 SpoU rRNA Methylase family BIF_RS06730 PF05167 Uncharacterised ACR (DUF711) BIF_RS06745 PF10509 Galactokinase galactose-binding signature BIF_RS06745 PF08544 GHMP kinases C terminal BIF_RS06745 PF00288 GHMP kinases N terminal domain BIF_RS06750 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BIF_RS06750 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BIF_RS06755 PF08220 DeoR-like helix-turn-helix domain BIF_RS06755 PF00455 DeoR C terminal sensor domain BIF_RS06760 PF00535 Glycosyl transferase family 2 BIF_RS06765 PF01180 Dihydroorotate dehydrogenase BIF_RS06770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BIF_RS06775 PF00912 Transglycosylase BIF_RS06775 PF00905 Penicillin binding protein transpeptidase domain BIF_RS06780 PF13545 Crp-like helix-turn-helix domain BIF_RS06780 PF00027 Cyclic nucleotide-binding domain BIF_RS06785 PF03099 Biotin/lipoate A/B protein ligase family BIF_RS06785 PF10437 Bacterial lipoate protein ligase C-terminus BIF_RS06795 PF00180 Isocitrate/isopropylmalate dehydrogenase BIF_RS06800 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BIF_RS06800 PF00326 Prolyl oligopeptidase family BIF_RS06810 PF01597 Glycine cleavage H-protein BIF_RS06815 PF09297 NADH pyrophosphatase zinc ribbon domain BIF_RS06815 PF00293 NUDIX domain BIF_RS06815 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BIF_RS06830 PF00085 Thioredoxin BIF_RS06840 PF02397 Bacterial sugar transferase BIF_RS06855 PF00535 Glycosyl transferase family 2 BIF_RS06865 PF00483 Nucleotidyl transferase BIF_RS06870 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BIF_RS06875 PF16363 GDP-mannose 4,6 dehydratase BIF_RS06880 PF00535 Glycosyl transferase family 2 BIF_RS06895 PF01501 Glycosyl transferase family 8 BIF_RS06895 PF00535 Glycosyl transferase family 2 BIF_RS06925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BIF_RS06925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BIF_RS06945 PF02397 Bacterial sugar transferase BIF_RS06955 PF07690 Major Facilitator Superfamily BIF_RS06960 PF03358 NADPH-dependent FMN reductase BIF_RS06960 PF01566 Natural resistance-associated macrophage protein BIF_RS06970 PF01680 SOR/SNZ family BIF_RS06975 PF01174 SNO glutamine amidotransferase family BIF_RS06980 PF01370 NAD dependent epimerase/dehydratase family BIF_RS07000 PF00535 Glycosyl transferase family 2 BIF_RS07010 PF00005 ABC transporter BIF_RS07010 PF00664 ABC transporter transmembrane region BIF_RS07015 PF00501 AMP-binding enzyme BIF_RS07020 PF00293 NUDIX domain BIF_RS07020 PF02545 Maf-like protein BIF_RS07025 PF01451 Low molecular weight phosphotyrosine protein phosphatase BIF_RS07035 PF13614 AAA domain BIF_RS07050 PF00288 GHMP kinases N terminal domain BIF_RS07050 PF08544 GHMP kinases C terminal BIF_RS07055 PF03447 Homoserine dehydrogenase, NAD binding domain BIF_RS07055 PF00742 Homoserine dehydrogenase BIF_RS07055 PF01842 ACT domain BIF_RS07060 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BIF_RS07060 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BIF_RS07065 PF05746 DALR anticodon binding domain BIF_RS07065 PF00750 tRNA synthetases class I (R) BIF_RS07065 PF03485 Arginyl tRNA synthetase N terminal domain BIF_RS07075 PF01042 Endoribonuclease L-PSP BIF_RS07080 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS07085 PF06165 Glycosyltransferase family 36 BIF_RS07085 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BIF_RS07110 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BIF_RS07110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BIF_RS07115 PF01939 Endonuclease NucS BIF_RS07120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BIF_RS07125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BIF_RS07125 PF02874 ATP synthase alpha/beta family, beta-barrel domain BIF_RS07130 PF00231 ATP synthase BIF_RS07135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BIF_RS07135 PF02874 ATP synthase alpha/beta family, beta-barrel domain BIF_RS07135 PF00306 ATP synthase alpha/beta chain, C terminal domain BIF_RS07140 PF00213 ATP synthase delta (OSCP) subunit BIF_RS07145 PF00430 ATP synthase B/B' CF(0) BIF_RS07150 PF00137 ATP synthase subunit C BIF_RS07155 PF00119 ATP synthase A chain BIF_RS07160 PF04204 Homoserine O-succinyltransferase BIF_RS07165 PF07690 Major Facilitator Superfamily BIF_RS07170 PF01156 Inosine-uridine preferring nucleoside hydrolase BIF_RS07200 PF01719 Plasmid replication protein BIF_RS07210 PF13651 Adenine-specific methyltransferase EcoRI BIF_RS07215 PF12167 Arm DNA-binding domain BIF_RS07215 PF00589 Phage integrase family BIF_RS07220 PF02515 CoA-transferase family III BIF_RS07225 PF02013 Cellulose or protein binding domain BIF_RS07225 PF00150 Cellulase (glycosyl hydrolase family 5) BIF_RS07230 PF03547 Membrane transport protein BIF_RS07235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BIF_RS07235 PF00205 Thiamine pyrophosphate enzyme, central domain BIF_RS07235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BIF_RS07255 PF11896 Domain of unknown function (DUF3416) BIF_RS07255 PF00128 Alpha amylase, catalytic domain BIF_RS07260 PF00719 Inorganic pyrophosphatase BIF_RS07270 PF00486 Transcriptional regulatory protein, C terminal BIF_RS07275 PF00633 Helix-hairpin-helix motif BIF_RS07275 PF10576 Iron-sulfur binding domain of endonuclease III BIF_RS07275 PF00730 HhH-GPD superfamily base excision DNA repair protein BIF_RS07280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BIF_RS07285 PF00133 tRNA synthetases class I (I, L, M and V) BIF_RS07285 PF08264 Anticodon-binding domain of tRNA BIF_RS07290 PF01037 Lrp/AsnC ligand binding domain BIF_RS07295 PF01817 Chorismate mutase type II BIF_RS07295 PF02153 Prephenate dehydrogenase BIF_RS07305 PF07497 Rho termination factor, RNA-binding domain BIF_RS07305 PF07498 Rho termination factor, N-terminal domain BIF_RS07305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BIF_RS07310 PF01593 Flavin containing amine oxidoreductase BIF_RS07315 PF10611 Protein of unknown function (DUF2469) BIF_RS07325 PF02934 GatB/GatE catalytic domain BIF_RS07325 PF02637 GatB domain BIF_RS07330 PF01425 Amidase BIF_RS07335 PF02686 Glu-tRNAGln amidotransferase C subunit BIF_RS07345 PF00005 ABC transporter BIF_RS07365 PF07724 AAA domain (Cdc48 subfamily) BIF_RS07365 PF17871 AAA lid domain BIF_RS07365 PF10431 C-terminal, D2-small domain, of ClpB protein BIF_RS07365 PF00004 ATPase family associated with various cellular activities (AAA) BIF_RS07365 PF02861 Clp amino terminal domain, pathogenicity island component BIF_RS07370 PF01557 Fumarylacetoacetate (FAA) hydrolase family BIF_RS07390 PF04203 Sortase domain BIF_RS07395 PF01168 Alanine racemase, N-terminal domain BIF_RS07400 PF00749 tRNA synthetases class I (E and Q), catalytic domain BIF_RS07410 PF00230 Major intrinsic protein BIF_RS07430 PF03948 Ribosomal protein L9, C-terminal domain BIF_RS07430 PF01281 Ribosomal protein L9, N-terminal domain BIF_RS07435 PF01084 Ribosomal protein S18 BIF_RS07440 PF00436 Single-strand binding protein family BIF_RS07445 PF01250 Ribosomal protein S6 BIF_RS07450 PF14572 Phosphoribosyl synthetase-associated domain BIF_RS07450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BIF_RS07455 PF00294 pfkB family carbohydrate kinase BIF_RS07465 PF01156 Inosine-uridine preferring nucleoside hydrolase BIF_RS07470 PF00356 Bacterial regulatory proteins, lacI family BIF_RS07490 PF03275 UDP-galactopyranose mutase BIF_RS07505 PF00884 Sulfatase BIF_RS07510 PF00884 Sulfatase BIF_RS07515 PF17994 Galactofuranosyltransferase 2 N-terminal BIF_RS07555 PF00005 ABC transporter BIF_RS07565 PF17994 Galactofuranosyltransferase 2 N-terminal BIF_RS07600 PF00027 Cyclic nucleotide-binding domain BIF_RS07600 PF00005 ABC transporter BIF_RS07615 PF02705 K+ potassium transporter BIF_RS07620 PF01026 TatD related DNase BIF_RS07635 PF00664 ABC transporter transmembrane region BIF_RS07635 PF00005 ABC transporter BIF_RS07640 PF00664 ABC transporter transmembrane region BIF_RS07640 PF00005 ABC transporter BIF_RS07645 PF09334 tRNA synthetases class I (M) BIF_RS07645 PF08264 Anticodon-binding domain of tRNA BIF_RS07660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BIF_RS07665 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase BIF_RS07665 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BIF_RS07670 PF00331 Glycosyl hydrolase family 10 BIF_RS07670 PF07859 alpha/beta hydrolase fold BIF_RS07675 PF09335 SNARE associated Golgi protein BIF_RS07690 PF14310 Fibronectin type III-like domain BIF_RS07690 PF00933 Glycosyl hydrolase family 3 N terminal domain BIF_RS07690 PF01915 Glycosyl hydrolase family 3 C-terminal domain BIF_RS07695 PF13977 BetI-type transcriptional repressor, C-terminal BIF_RS07695 PF00440 Bacterial regulatory proteins, tetR family BIF_RS07700 PF13419 Haloacid dehalogenase-like hydrolase BIF_RS07705 PF13411 MerR HTH family regulatory protein BIF_RS07710 PF00226 DnaJ domain BIF_RS07710 PF01556 DnaJ C terminal domain BIF_RS07710 PF00684 DnaJ central domain BIF_RS07715 PF01025 GrpE BIF_RS07720 PF00012 Hsp70 protein BIF_RS07725 PF00356 Bacterial regulatory proteins, lacI family BIF_RS07735 PF13419 Haloacid dehalogenase-like hydrolase BIF_RS07740 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BIF_RS07740 PF03714 Bacterial pullanase-associated domain BIF_RS07740 PF00128 Alpha amylase, catalytic domain BIF_RS07745 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS07750 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS07760 PF16657 Maltogenic Amylase, C-terminal domain BIF_RS07760 PF00128 Alpha amylase, catalytic domain BIF_RS07765 PF02446 4-alpha-glucanotransferase BIF_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS07780 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS07785 PF00356 Bacterial regulatory proteins, lacI family BIF_RS07795 PF00128 Alpha amylase, catalytic domain BIF_RS07800 PF00300 Histidine phosphatase superfamily (branch 1) BIF_RS07810 PF00881 Nitroreductase family BIF_RS07820 PF07690 Major Facilitator Superfamily BIF_RS07840 PF02540 NAD synthase BIF_RS07840 PF00795 Carbon-nitrogen hydrolase BIF_RS07875 PF07944 Beta-L-arabinofuranosidase, GH127 BIF_RS07880 PF00356 Bacterial regulatory proteins, lacI family BIF_RS07880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BIF_RS07885 PF02146 Sir2 family BIF_RS07890 PF13291 ACT domain BIF_RS07890 PF00291 Pyridoxal-phosphate dependent enzyme BIF_RS07895 PF00128 Alpha amylase, catalytic domain BIF_RS07910 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS07915 PF00528 Binding-protein-dependent transport system inner membrane component BIF_RS07920 PF13416 Bacterial extracellular solute-binding protein BIF_RS07930 PF16874 Glycosyl hydrolase family 36 C-terminal domain BIF_RS07930 PF16875 Glycosyl hydrolase family 36 N-terminal domain BIF_RS07935 PF01171 PP-loop family BIF_RS07935 PF11734 TilS substrate C-terminal domain BIF_RS07935 PF14437 MafB19-like deaminase BIF_RS07940 PF00999 Sodium/hydrogen exchanger family BIF_RS07955 PF00692 dUTPase BIF_RS07960 PF00689 Cation transporting ATPase, C-terminus BIF_RS07960 PF00690 Cation transporter/ATPase, N-terminus BIF_RS07965 PF08032 RNA 2'-O ribose methyltransferase substrate binding BIF_RS07965 PF00588 SpoU rRNA Methylase family BIF_RS07975 PF00005 ABC transporter BIF_RS07975 PF17912 MalK OB fold domain BIF_RS07980 PF07885 Ion channel BIF_RS07985 PF00069 Protein kinase domain BIF_RS07985 PF00400 WD domain, G-beta repeat BIF_RS08000 PF03990 G5-linked-Ubiquitin-like domain BIF_RS08000 PF07501 G5 domain BIF_RS08000 PF06737 Transglycosylase-like domain BIF_RS08005 PF00398 Ribosomal RNA adenine dimethylase BIF_RS08010 PF00288 GHMP kinases N terminal domain BIF_RS08010 PF08544 GHMP kinases C terminal BIF_RS08020 PF13735 tRNA nucleotidyltransferase domain 2 putative BIF_RS08020 PF01743 Poly A polymerase head domain BIF_RS08020 PF12627 Probable RNA and SrmB- binding site of polymerase A BIF_RS08025 PF00293 NUDIX domain BIF_RS08040 PF07992 Pyridine nucleotide-disulphide oxidoreductase BIF_RS08045 PF17762 HTH domain found in ParB protein BIF_RS08045 PF02195 ParB-like nuclease domain BIF_RS08050 PF13614 AAA domain BIF_RS08055 PF02527 rRNA small subunit methyltransferase G BIF_RS08060 PF14804 Jag N-terminus BIF_RS08060 PF01424 R3H domain BIF_RS08065 PF02096 60Kd inner membrane protein BIF_RS08070 PF01809 Putative membrane protein insertion efficiency factor BIF_RS08075 PF00825 Ribonuclease P BIF_RS08080 PF00468 Ribosomal protein L34