locus strain_id interpro function go others BBPR_0001 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR020591|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PR00051|PTHR30050|PTHR30050:SF2|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 BBPR_0002 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|PTHR30478|SM00480|SSF55979|TIGR00663 BBPR_0003 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001238|IPR003395|IPR018078|IPR027417 DNA-binding, RecF|DNA-binding, RecF, conserved site|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0003697|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00365|PF02463|PS00617|SSF52540|TIGR00611 BBPR_0004 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258|PTHR36456 BBPR_0005 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 BBPR_0006 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002205|IPR005743|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719|TIGR01063 BBPR_0007 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021949 Domain of unknown function DUF3566. transmembrane PF12089 BBPR_0008 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic SSF51011 BBPR_0011 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006710|IPR023296 Glycoside hydrolase, family 43|Glycosyl hydrolase, five-bladed beta-propellor domain GO:0004553|GO:0005975 G3DSA:2.115.10.20|PF04616|PTHR22925|PTHR22925:SF43|SSF75005 BBPR_0012 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PTHR30146|SM00354|SSF47413|SSF53822 BBPR_0013 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR11614|PTHR11614:SF40|SSF53474 BBPR_0014 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018841 Protein of unknown function DUF2442 G3DSA:3.30.2020.10|PF10387|SSF143880 BBPR_0016 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002052|IPR011639|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Restriction modification methylase Eco57I|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0003824|GO:0006304|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF01135|PF07669|PR00507|PS00092|SSF53335 BBPR_0017 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 PF06616 BBPR_0018 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR026870 Zinc-ribbon domain PF13240 BBPR_0019 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30349|SSF56349 BBPR_0020 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR019931 LPXTG cell wall anchor domain TIGR01167 BBPR_0021 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:1.10.285.10|G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|PTHR11606|PTHR11606:SF4|SM00839|SSF51735|SSF53223 BBPR_0022 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF07729|SM00895|SSF48008 BBPR_0024 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001185|IPR019823 Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site GO:0005216|GO:0006810|GO:0016021 PF01741|PR01264|PS01327|PTHR30266|PTHR30266:SF2|SSF81330|TIGR00220 BBPR_0025 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000601|IPR006558|IPR010720|IPR013320|IPR017853|IPR032179 Alpha-L-arabinofuranosidase, C-terminal|Concanavalin A-like lectin/glucanase domain|Domain of unknown function DUF5011|Glycoside hydrolase superfamily|LamG-like jellyroll fold|PKD domain GO:0046373|GO:0046556 G3DSA:2.60.120.200|G3DSA:2.60.40.670|PF06964|PF13385|PF16403|PTHR31776|SM00560|SM00813|SSF49299|SSF49899|SSF51011|SSF51445 BBPR_0026 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013781|IPR015882|IPR015883|IPR017853|IPR025705|IPR029018 Beta-hexosaminidase|Beta-hexosaminidase, bacteial type, N-terminal|Chitobiase/beta-hexosaminidase domain 2-like|Glycoside hydrolase family 20, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0004553|GO:0004563|GO:0005975 G3DSA:3.20.20.80|G3DSA:3.30.379.10|PF00728|PF02838|PR00738|PTHR22600|SSF51445|SSF55545 BBPR_0029 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PTHR30146|SM00354|SSF47413|SSF53822 BBPR_0030 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PTHR30505|PTHR30505:SF3|SSF55804 BBPR_0031 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.270|PF02302|PTHR33843|PTHR33843:SF2|SSF52794 BBPR_0032 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 PF03611|PTHR33843|PTHR33843:SF4 BBPR_0033 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002725 Protein of unknown function DUF45 PF01863|PTHR30399 BBPR_0034 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002177|IPR008331|IPR009078|IPR012347|IPR023188 DNA-binding protein Dps|DNA-binding protein Dps, conserved site|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0016722|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|PS00818|PTHR30295|PTHR30295:SF10|SSF47240 BBPR_0035 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF7|SSF103481 BBPR_0036 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PTHR22777|SM00116|SM01091|SSF54631|SSF56176 BBPR_0037 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR001761|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Periplasmic binding protein/LacI sugar binding domain|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF00532|PTHR30146|SM00354|SSF47413|SSF53822 BBPR_0038 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|PTHR11002|PTHR11002:SF17|SM00947|SSF53056 BBPR_0039 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000866|IPR012336|IPR017559|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C|Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0006979|GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|PTHR10681|PTHR10681:SF121|SSF52833|TIGR03137 BBPR_0040 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000103|IPR012336|IPR017561|IPR023753 Alkyl hydroperoxide reductase F subunit homogue, putative|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|G3DSA:3.50.50.60|PF07992|PF13192|PR00368|PR00469|PTHR22912|PTHR22912:SF175|SSF51905|SSF52833|TIGR03143 BBPR_0041 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF135|SSF103473 BBPR_0042 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR015813|IPR018129|IPR021135|IPR033129 Phosphoenolpyruvate carboxylase|Phosphoenolpyruvate carboxylase, His active site|Phosphoenolpyruvate carboxylase, Lys active site|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0006099|GO:0008964|GO:0015977 G3DSA:1.20.1440.90|PF00311|PR00150|PS00393|PS00781|PTHR30523|PTHR30523:SF0|SSF51621 BBPR_0043 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010619|IPR024528 Putative threonine/serine exporter|Threonine/Serine exporter, ThrE PF06738|PF12821|PTHR31082 BBPR_0044 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase G3DSA:3.20.20.140|PF07969|PTHR22642|PTHR22642:SF2|SSF51556 BBPR_0046 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001412|IPR002305|IPR002306|IPR014729 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|PF00579|PR01039|PS00178|PTHR10055|PTHR10055:SF6|SSF52374|TIGR00233 BBPR_0047 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021426 Protein of unknown function DUF3073 PF11273 BBPR_0049 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR003661|IPR016120|IPR032834 Histidine kinase-like ATPase, C-terminal domain|Sensor histidine kinase NatK, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0007165|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF14501|SSF55874|SSF55890 BBPR_0050 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005888|IPR016040 NAD(P)-binding domain|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF437|SSF51735|TIGR01181 BBPR_0052 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000772|IPR002053|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 25|Ricin B, lectin domain GO:0003796|GO:0005975|GO:0009253|GO:0016998 G3DSA:2.80.10.50|G3DSA:3.20.20.80|PF01183|PF14200|PTHR34135|PTHR34135:SF2|SM00458|SSF50370|SSF51445 BBPR_0053 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF81|SSF53448 BBPR_0054 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 BBPR_0055 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33215|SSF46689 BBPR_0056 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002611|IPR003593|IPR027417 AAA+ ATPase domain|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PTHR30050|PTHR30050:SF6|SM00382|SSF52540 BBPR_0057 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF46689|SSF53098 BBPR_0058 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13333|SSF53098 BBPR_0059 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13333|SSF53098 BBPR_0060 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025686 Glucosyl transferase II PF14264 BBPR_0061 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007345 Polysaccharide pyruvyl transferase PF04230 BBPR_0062 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007739 Rhamnan synthesis F PF05045 BBPR_0063 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BBPR_0064 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF466|SSF51735 BBPR_0065 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009057|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like GO:0003677 G3DSA:1.10.10.60|PF13011|SSF46689 BBPR_0066 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PTHR35004|PTHR35004:SF2 BBPR_0067 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PTHR35004|PTHR35004:SF2 BBPR_0068 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF53098 BBPR_0069 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|PTHR30050:SF6|SM00382|SSF52540 BBPR_0070 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|PTHR30050:SF6|SM00382|SSF52540 BBPR_0071 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 BBPR_0072 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF24|SSF53448 BBPR_0074 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 BBPR_0075 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 BBPR_0077 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PF01610|PTHR33498|PTHR33498:SF1 BBPR_0078 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005835|IPR005907|IPR029044 Glucose-1-phosphate thymidylyltransferase, short form|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0008879|GO:0009058|GO:0016779|GO:0045226 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF105|SSF53448|TIGR01207 BBPR_0079 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000888|IPR005913|IPR011051|IPR014710|IPR016040|IPR029903 NAD(P)-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold|RmlD-like substrate binding domain|dTDP-4-dehydrorhamnose 3,5-epimerase-related|dTDP-4-dehydrorhamnose reductase family GO:0008830 G3DSA:2.60.120.10|G3DSA:3.40.50.720|PD001462|PF00908|PF04321|PTHR10491|PTHR10491:SF4|SSF51182|SSF51735 BBPR_0080 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005888|IPR016040 NAD(P)-binding domain|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF437|SSF51735|TIGR01181 BBPR_0081 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PTHR30413|PTHR30413:SF8 BBPR_0082 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:2.70.50.60|G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF117|SM00382|SSF52540 BBPR_0083 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012337|IPR025246 Ribonuclease H-like domain|Transposase IS30-like HTH domain GO:0003676 PF13936|PTHR10948|SSF53098 BBPR_0085 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025420|IPR027417 Domain of unknown function DUF4143|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13173|PF13635|PTHR33295|PTHR33295:SF7|SSF52540 BBPR_0087 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000644|IPR004638|IPR011701|IPR013785|IPR020846 Aldolase-type TIM barrel|CBS domain|Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0003824|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|G3DSA:3.20.20.70|PF00571|PF07690|PR01036|PTHR23501|PTHR23501:SF82|SM00116|SSF103473|SSF54631|TIGR00711 BBPR_0088 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BBPR_0089 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002611|IPR027417 IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PTHR30050|SSF52540 BBPR_0092 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000811|IPR011833 Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|PTHR11468|PTHR11468:SF3|SSF53756|TIGR02093 BBPR_0093 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|SSF53098 BBPR_0095 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002610|IPR022764 Peptidase S54, rhomboid|Peptidase S54, rhomboid domain GO:0004252|GO:0006508|GO:0016021 G3DSA:1.20.1540.10|PF01694|PTHR22936|SSF144091 BBPR_0096 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BBPR_0097 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009619 Cell division protein CrgA MF_00631|PF06781 BBPR_0098 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010273 Protein of unknown function DUF881 PF05949|PTHR37313|PTHR37313:SF2 BBPR_0099 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005754|IPR023365 Sortase domain|Sortase family G3DSA:2.40.260.10|PF04203|PTHR33393|PTHR33393:SF3|SSF63817|TIGR01076 BBPR_0100 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF7|SSF52317|TIGR00566 BBPR_0101 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000719|IPR005543|IPR008271|IPR011009|IPR017441 PASTA domain|Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PF03793|PS00107|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SM00740|SSF56112 BBPR_0103 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000719|IPR008271|IPR011009 Protein kinase domain|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 BBPR_0104 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PTHR30627|PTHR30627:SF3|SSF56519|SSF56601 BBPR_0105 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PF01098|PTHR30474|PTHR30474:SF3 BBPR_0106 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PF00481|PTHR13832|PTHR13832:SF226|SM00331|SM00332|SSF81606 BBPR_0107 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000253|IPR008984|IPR032030 Forkhead-associated (FHA) domain|SMAD/FHA domain|YscD, cytoplasmic domain GO:0005515 G3DSA:2.60.200.20|PF16697|PTHR21712|PTHR21712:SF36|SM00240|SSF49879 BBPR_0108 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000253|IPR008984|IPR022128 Forkhead-associated (FHA) domain|Protein of unknown function DUF3662|SMAD/FHA domain GO:0005515 G3DSA:2.60.200.20|PF00498|PF12401|SM00240|SSF49879 BBPR_0109 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001375|IPR002469|IPR029058 Alpha/Beta hydrolase fold|Dipeptidylpeptidase IV, N-terminal domain|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:2.140.10.30|G3DSA:3.40.50.1820|PF00326|PF00930|PTHR11731|PTHR11731:SF110|SSF53474|SSF82171 BBPR_0110 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR017500|IPR017501 Phage infection protein, YhgE, C-terminal|Phage infection protein, YhgE, N-terminal PF12698|PTHR30294|PTHR30294:SF4|TIGR03061|TIGR03062 BBPR_0111 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013525|IPR017500 ABC-2 type transporter|Phage infection protein, YhgE, N-terminal GO:0016020 PF01061|PF12698|PTHR30294|PTHR30294:SF4|SSF58100|TIGR03061 BBPR_0112 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR11614|PTHR11614:SF100|SSF53474 BBPR_0113 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF23|SSF103481 BBPR_0117 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002569|IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|G3DSA:3.30.1060.10|MF_01401|PF01625|PF01641|PTHR10173|PTHR10173:SF31|SSF51316|SSF55068|TIGR00357|TIGR00401 BBPR_0119 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR006935|IPR014001|IPR021835|IPR025202|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Phospholipase D-like domain|Protein of unknown function DUF3427 GO:0003677|GO:0005524|GO:0016787 G3DSA:3.30.870.10|G3DSA:3.40.50.300|PF00271|PF04851|PF11907|PF13091|PTHR30195|PTHR30195:SF16|SM00487|SM00490|SSF52540|SSF56024 BBPR_0120 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR22769|PTHR22769:SF35|SSF55811 BBPR_0121 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR019933 DivIVA domain TIGR03544 BBPR_0122 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002765 Uncharacterised protein family UPF0145 G3DSA:3.30.110.70|MF_00338|PF01906|PTHR34068|PTHR34068:SF1|SSF117782 BBPR_0123 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF12697|PR00111|PR00412|PTHR10992|PTHR10992:SF698|SSF53474 BBPR_0124 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|PTHR13355|PTHR13355:SF8|SSF55729 BBPR_0125 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|PTHR21148|PTHR21148:SF26|SSF51713|TIGR00430|TIGR00449 BBPR_0126 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494 BBPR_0127 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PS00154|PS01229|PTHR24093|PTHR24093:SF126|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01525 BBPR_0128 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR016040|IPR021163|IPR023753 FAD/NAD(P)-binding domain|Ferredoxin-NADP+ reductase, adrenodoxin-type|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PIRSF000362|PR00419|PTHR11938|PTHR11938:SF4|SSF51971 BBPR_0129 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001915|IPR022919 Peptidase M48|Peptidase M48, protease HtpX, putative GO:0004222|GO:0006508 G3DSA:3.30.2010.10|MF_00188|PF01435|PTHR10120|PTHR10120:SF19 BBPR_0130 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007421|IPR011991|IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain|Schlafen, AAA domain|Winged helix-turn-helix DNA-binding domain GO:0005524 G3DSA:1.10.10.10|PF04326|PF13749|PTHR30595|PTHR30595:SF3|SSF46785 BBPR_0132 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025530 Protein of unknown function DUF4417 PF14386 BBPR_0137 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BBPR_0138 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002509|IPR011330|IPR012675 Beta-grasp domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.10.20.30|G3DSA:3.20.20.370|PF01522|PTHR10587|SSF88713 BBPR_0139 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000771|IPR006411|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|PTHR30559|PTHR30559:SF0|SSF51569|TIGR00167|TIGR01520 BBPR_0140 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|PTHR11846|SM00788|SSF52540|TIGR00184 BBPR_0141 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|PTHR28259 BBPR_0142 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|PTHR28259 BBPR_0143 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PTHR30146|SM00354|SSF47413|SSF53822 BBPR_0144 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006047|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|SSF51445 BBPR_0145 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BBPR_0146 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005828|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PTHR23508|PTHR23508:SF16|SSF103473 BBPR_0147 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040|IPR023753 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|FAD/NAD(P)-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.50.50.60|MF_00435|PF01450|PF07991|PTHR21371|SSF48179|SSF51735|TIGR00465 BBPR_0148 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040|IPR023753 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|FAD/NAD(P)-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.50.50.60|MF_00435|PF01450|PF07991|PTHR21371|SSF48179|SSF51735|TIGR00465 BBPR_0149 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007569|IPR011335 Domain of unknown function DUF559|Restriction endonuclease type II-like PF04480|PTHR37044|SSF52980 BBPR_0150 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004199|IPR006102|IPR006103|IPR006104|IPR008979|IPR011013|IPR013781|IPR013812|IPR014718|IPR017853|IPR023230|IPR023232 Beta galactosidase small chain/ domain 5|Galactose mutarotase-like domain|Galactose-binding domain-like|Glycoside hydrolase family 2, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2, active site|Glycoside hydrolase, family 2, conserved site|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycosyl hydrolases family 2, sugar binding domain GO:0003824|GO:0004553|GO:0004565|GO:0005975|GO:0009341|GO:0030246 G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:2.70.98.10|G3DSA:3.20.20.80|PF00703|PF02836|PF02837|PF02929|PS00608|PS00719|PTHR10066|PTHR10066:SF72|SM01038|SSF49303|SSF49785|SSF51445|SSF74650 BBPR_0151 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085 PF00324|PS00218|PTHR11785|PTHR11785:SF26 BBPR_0152 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF14278|PTHR30055|PTHR30055:SF55|SSF46689 BBPR_0153 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF577|SM00382|SSF52540 BBPR_0154 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30287 BBPR_0155 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003742|IPR016051|IPR029026|IPR029028 Alpha/beta knot methyltransferases|Ribosomal RNA large subunit methyltransferase H|SPOUT methyltransferase, predicted|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168|GO:0031167 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|PTHR33603|PTHR33603:SF1|SSF75217|TIGR00246 BBPR_0156 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005765|IPR029057 Phosphoribosyltransferase-like|Uracil phosphoribosyl transferase GO:0004845|GO:0006223 G3DSA:3.40.50.2020|MF_01218_B|PF14681|PTHR10285|PTHR10285:SF46|SSF53271|TIGR01091 BBPR_0158 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PTHR10681|SSF52833 BBPR_0159 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR017039 Virulence factor BrkB PF03631|PIRSF035875 BBPR_0160 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002109|IPR011915|IPR012336 Glutaredoxin|Glutaredoxin-like protein, actinobacteria|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PTHR34386|SSF52833|TIGR02200 BBPR_0161 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PF01610 BBPR_0162 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013320|IPR029052 Concanavalin A-like lectin/glucanase domain|Metallo-dependent phosphatase-like G3DSA:3.60.21.10|PF13385|SSF49899|SSF56300 BBPR_0164 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003476|IPR013529|IPR013738|IPR013781|IPR017853|IPR029062 Beta-galactosidase trimerisation|Class I glutamine amidotransferase-like|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 42|Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 G3DSA:3.20.20.80|G3DSA:3.40.50.880|PF02449|PF08532|PIRSF001084|PTHR36447|PTHR36447:SF1|SSF51445|SSF52317 BBPR_0165 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003615 HNH nuclease PF13391 BBPR_0166 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007421|IPR011991|IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain|Schlafen, AAA domain|Winged helix-turn-helix DNA-binding domain GO:0005524 G3DSA:1.10.10.10|PF04326|PF13749|PTHR30595|PTHR30595:SF3|SSF46785 BBPR_0168 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001958|IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01035|PS00216|PTHR23501|PTHR23501:SF48|SSF103473 BBPR_0170 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BBPR_0171 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BBPR_0172 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.357.10|PF00440|PF13305|PR00455|PTHR30055|SSF46689|SSF48498 BBPR_0173 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003542|IPR008278 4'-phosphopantetheinyl transferase superfamily|Enterobactin synthetase-like, component D GO:0000287|GO:0008897|GO:0009239|GO:0009366|GO:0016780 PF01648|PR01399|PTHR38096|SSF56214 BBPR_0175 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002052|IPR003356|IPR004546|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|Restriction endonuclease, type I, HsdM|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0009007|GO:0009307|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30408|PTHR30408:SF4|SSF53335|TIGR00497 BBPR_0177 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 BBPR_0178 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011664 Abortive infection system protein AbiD/AbiF-like PF07751 BBPR_0179 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR022625|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal|Type-1 restriction enzyme R protein, C-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PF12008|PTHR30195|PTHR30195:SF16|SM00487|SSF52540|TIGR00348 BBPR_0180 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008687 Bacterial mobilisation PF05713 BBPR_0181 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 BBPR_0183 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR026989 Transposon-encoded protein TnpV PF14198 BBPR_0184 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF14659|PTHR30349|PTHR30349:SF20|SSF56349 BBPR_0186 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000772|IPR032179 Domain of unknown function DUF5011|Ricin B, lectin domain PF16403|PTHR33794|PTHR33794:SF4|SSF50370 BBPR_0188 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|PTHR11732:SF275|SSF51430 BBPR_0189 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010985|IPR014795 Ribbon-helix-helix|Vibrio phage ICP1, Orf50 GO:0006355 G3DSA:1.20.5.780|PF08681|PTHR35401|PTHR35401:SF1|SSF47598 BBPR_0190 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|SM00347|SSF46785 BBPR_0191 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF190|SM00382|SSF52540|SSF90123 BBPR_0192 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF271|SM00382|SSF52540|SSF90123 BBPR_0193 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003343|IPR008928|IPR008964|IPR022038|IPR027414 Bacterial Ig-like domain|Bacterial Ig-like, group 2|Glycosyl hydrolase family, N-terminal domain|Invasin/intimin cell-adhesion fragments|Six-hairpin glycosidase-like GO:0003824 G3DSA:2.60.40.1080|G3DSA:2.70.98.50|PF02368|PF07523|PF14498|PTHR31084|PTHR31084:SF0|SM00635|SSF48208|SSF49373 BBPR_0194 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005247|IPR008914 Phosphatidylethanolamine-binding protein|YbhB/YbcL G3DSA:3.90.280.10|PF01161|SSF49777|TIGR00481 BBPR_0195 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PF03577|PTHR12994|PTHR12994:SF17 BBPR_0196 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000559|IPR020628|IPR027417 Formate-tetrahydrofolate ligase, FTHFS|Formate-tetrahydrofolate ligase, FTHFS, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0004329|GO:0005524|GO:0009396 G3DSA:3.30.1510.10|G3DSA:3.40.50.300|PF01268|PS00721|PTHR10025|PTHR10025:SF40|SSF52540 BBPR_0197 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001398|IPR014347 Macrophage migration inhibitory factor|Tautomerase/MIF superfamily G3DSA:3.30.429.10|PD004816|PF01187|PTHR11954|PTHR11954:SF6|SSF55331 BBPR_0198 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PF04138 BBPR_0199 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23542|PTHR23542:SF1|SSF103473 BBPR_0200 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|PTHR23029:SF35|SM00855|SSF53254 BBPR_0202 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF20|SSF161098 BBPR_0203 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR015168|IPR027939 NMT1/THI5 family|SsuA/THI5-like GO:0009228 PF09084|PTHR31528|SSF53850 BBPR_0204 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784|TIGR01509 BBPR_0205 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000924|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PTHR11451|PTHR11451:SF41|SSF48163|SSF52374|TIGR00464 BBPR_0206 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025420 Domain of unknown function DUF4143 PF13635|PTHR33295|PTHR33295:SF5 BBPR_0207 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13173|PTHR33295|PTHR33295:SF5|SSF52540 BBPR_0208 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR32440|SSF56300 BBPR_0209 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF18|SM00346|SSF46785|SSF55781 BBPR_0210 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR015937|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF38|SSF53732|TIGR00170 BBPR_0211 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000573|IPR004431|IPR015928|IPR015937 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|PTHR11670|PTHR11670:SF27|SSF52016|TIGR00171 BBPR_0212 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000330|IPR001650|IPR007527|IPR013663|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase, SWF/SNF/SWI type, bacterial|P-loop containing nucleoside triphosphate hydrolase|SNF2-related, N-terminal domain|Zinc finger, SWIM-type GO:0005524|GO:0008270 G3DSA:3.40.50.300|PF00176|PF00271|PF04434|PF08455|PTHR10799|PTHR10799:SF633|SM00487|SM00490|SSF52540 BBPR_0214 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 BBPR_0215 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005720|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain GO:0003824|GO:0005737|GO:0016627|GO:0055114 G3DSA:3.20.20.70|PF01180|SSF51395 BBPR_0217 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|PF00275|PTHR21090|SSF55205|TIGR01072 BBPR_0218 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23513|PTHR23513:SF4|SSF103473 BBPR_0219 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|SSF46689 BBPR_0221 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR020785 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PS00359|PTHR11661|PTHR11661:SF7|SM00649|SSF46906|SSF54747|TIGR01632 BBPR_0222 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|PTHR23105|PTHR23105:SF5|SSF56808|TIGR01169 BBPR_0223 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type GO:0006457 G3DSA:3.10.50.40|PF00254|PTHR10516|PTHR10516:SF320|SSF54534 BBPR_0226 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011990|IPR012336 Tetratricopeptide-like helical domain|Thioredoxin-like fold GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF14561|SSF48452|SSF52833 BBPR_0227 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023577|IPR033469 CYTH domain|CYTH-like domain G3DSA:2.40.320.10|PTHR40114|SM01118|SSF55154 BBPR_0228 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PTHR30146|PTHR30146:SF43|SM00354|SSF47413|SSF53822 BBPR_0229 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029017 Enolase N-terminal domain-like G3DSA:3.30.390.10 BBPR_0230 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001354|IPR029065 Enolase C-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 G3DSA:3.20.20.120|PF13378|PTHR13794|PTHR13794:SF58|SSF51604 BBPR_0231 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|PTHR24322|SSF51735 BBPR_0232 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005102 Carbohydrate binding X2 domain PF03442 BBPR_0233 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012711|IPR029062 Class I glutamine amidotransferase-like|Lacto-N-biose phosphorylase GO:0016758 PF09508|SSF52317|TIGR02336 BBPR_0234 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006056|IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|RidA family|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|SSF55298|TIGR00004 BBPR_0235 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004129|IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|Glycerophosphoryl diester phosphodiesterase|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081|GO:0008889 G3DSA:3.20.20.190|PF03009|PTHR23344|SSF51695 BBPR_0236 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|PTHR11956|PTHR11956:SF6|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 BBPR_0238 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002986|IPR009006|IPR022643|IPR022644|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PS00879|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419 BBPR_0239 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001127|IPR011055 Duplicated hybrid motif|Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 G3DSA:2.70.70.10|PF00358|PS00371|PTHR30175|PTHR30175:SF5|SSF51261|TIGR00830 BBPR_0240 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001996|IPR003352|IPR010974|IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1|Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016020|GO:0016021|GO:0019866 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PTHR30009|PTHR30009:SF4|SSF55604|TIGR00826|TIGR01998 BBPR_0241 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001342|IPR002912|IPR005106|IPR016040|IPR016204|IPR019811 ACT domain|Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0008152|GO:0016491|GO:0016597|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF01842|PF03447|PIRSF000098|PS01042|PTHR21499|PTHR21499:SF2|SSF51735|SSF55021|SSF55347 BBPR_0242 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000870|IPR006204|IPR013750|IPR014721|IPR020568 GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Homoserine kinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004413|GO:0005524|GO:0006566 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00384|PF00288|PF08544|PIRSF000676|PR00958|PTHR20861|PTHR20861:SF1|SSF54211|SSF55060|TIGR00191 BBPR_0243 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR003697|IPR015797|IPR020084|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0005737|GO:0016787 G3DSA:3.90.79.10|G3DSA:3.90.950.10|MF_00528|PF00293|PF02545|PS00893|PTHR22769|PTHR22769:SF24|SSF52972|SSF55811 BBPR_0246 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF559|SM00382|SSF52540 BBPR_0248 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547|PTHR36838 BBPR_0249 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002933|IPR010174|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, DapE GO:0008152|GO:0009014|GO:0009089|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PTHR11014|SSF53187|SSF55031|TIGR01900 BBPR_0251 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|PF10150|PTHR30001|PTHR30001:SF0|SM00316|SSF50249|TIGR00757 BBPR_0252 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001787|IPR018258|IPR028909 Ribosomal protein L21|Ribosomal protein L21, conserved site|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PS01169|PTHR21349|SSF141091|TIGR00061 BBPR_0253 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|PTHR15893|SSF110324|TIGR00062 BBPR_0254 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025159 Transcriptional regulator, AbiEi antitoxin PF13338 BBPR_0255 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR015349|IPR027417 GTP binding domain|GTP-binding protein OBG, C-terminal|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PF09269|PR00326|PS00905|PTHR11702|PTHR11702:SF3|SSF102741|SSF52540|SSF82051|TIGR02729|TIGR03595 BBPR_0256 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|PTHR11063|PTHR11063:SF12|SM00359|SSF53633|SSF88697|TIGR01027 BBPR_0257 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF306|SSF53383 BBPR_0258 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|TIGR00964 BBPR_0259 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001062|IPR006645|IPR008991|IPR014722|IPR015869 NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF02357|PR00338|PS01014|PTHR30265|SM00738|SSF50104|SSF82679|TIGR00922 BBPR_0260 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|PTHR10434:SF21|SM00563|SSF69593 BBPR_0261 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|PTHR11728|SSF48179|SSF51735 BBPR_0262 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00843|PS00844|PTHR23132|PTHR23132:SF8|SSF52440|SSF56059|TIGR01205 BBPR_0263 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004129|IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|Glycerophosphoryl diester phosphodiesterase|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081|GO:0008889 G3DSA:3.20.20.190|PF03009|PTHR23344|SSF51695 BBPR_0264 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR008979|IPR011490|IPR013784|IPR014766|IPR025706 Carbohydrate-binding-like fold|Carboxypeptidase, regulatory domain|Coagulation factor 5/8 C-terminal domain|Endo-alpha-N-acetylgalactosaminidase|FIVAR domain|Galactose-binding domain-like GO:0030246|GO:0033926 G3DSA:1.20.5.420|G3DSA:2.60.120.260|G3DSA:2.60.40.1120|PF00754|PF07554|PF12905|PF13620|SSF49452|SSF49785 BBPR_0265 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005946|IPR029057|IPR029099 Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009165 G3DSA:3.40.50.2020|PF13793|PF14572|PTHR10210|PTHR10210:SF41|SM01400|SSF53271|TIGR01251 BBPR_0269 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002104|IPR011010|IPR013087|IPR013762|IPR016177|IPR023109 DNA breaking-rejoining enzyme, catalytic core|DNA-binding domain|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676|GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|G3DSA:3.30.160.60|PF00589|PF02920|PTHR30349|PTHR30349:SF20|SSF54171|SSF56349 BBPR_0270 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013320|IPR025874 Concanavalin A-like lectin/glucanase domain|Double zinc ribbon G3DSA:2.60.120.200|PF12773 BBPR_0271 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|PTHR21011|SSF54995|TIGR00166 BBPR_0272 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PTHR10302|SSF50249|TIGR00621 BBPR_0273 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001648|IPR018275 Ribosomal protein S18|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|PTHR13479|SSF46911|TIGR00165 BBPR_0274 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000244|IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9|Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|PTHR21368|SSF55653|SSF55658|TIGR00158 BBPR_0275 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008979|IPR022038 Bacterial Ig-like domain|Galactose-binding domain-like G3DSA:2.60.120.260|PF07523 BBPR_0276 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR032179 Domain of unknown function DUF5011 PF16403 BBPR_0277 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000425|IPR022357|IPR023271 Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF00230|PR00783|PS00221|PTHR19139|PTHR19139:SF147|SSF81338|TIGR00861 BBPR_0278 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022603 Domain of unknown function DUF3152 PF11350|SSF55486 BBPR_0279 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR014729|IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0005524|GO:0016876|GO:0043039 G3DSA:3.40.50.620|G3DSA:3.90.800.10|PF00749|PTHR11451|PTHR11451:SF35|SSF52374 BBPR_0280 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|PTHR10146|SSF51419|TIGR00044 BBPR_0281 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001792|IPR017968|IPR020456 Acylphosphatase|Acylphosphatase, conserved site|Acylphosphatase-like domain GO:0003998 G3DSA:3.30.70.100|PF00708|PR00112|PS00150|PS00151|PTHR10029|SSF54975 BBPR_0282 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002035|IPR008966|IPR008970 Adhesion domain|Collagen-binding surface protein Cna, B-type domain|von Willebrand factor, type A G3DSA:2.60.40.1140|G3DSA:3.40.50.410|PF13519|SM00327|SSF49401|SSF49478|SSF53300 BBPR_0283 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008454|IPR019931|IPR026466|IPR032334 Collagen-binding surface protein Cna-like, B-type domain|Fimbrial isopeptide formation D2 domain|Gram-positive pilin backbone subunit 2, Cna-B-like domain|LPXTG cell wall anchor domain PF05738|PF16569|SSF49478|TIGR01167|TIGR04226 BBPR_0284 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005754|IPR023365 Sortase domain|Sortase family G3DSA:2.40.260.10|PF04203|PTHR33393|PTHR33393:SF5|SSF63817|TIGR01076 BBPR_0285 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR032327 Protein of unknown function DUF4854 PF16146 BBPR_0286 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011234|IPR018833 Domain of unknown function DUF2437|Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PF10370|PTHR11820|SSF56529 BBPR_0287 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF120|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 BBPR_0288 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006685|IPR010920|IPR011014 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|PF00924|PTHR30566|SSF50182|SSF82861 BBPR_0289 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689 BBPR_0290 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR024499|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF2974 G3DSA:3.40.50.1820|PF11187|SSF53474 BBPR_0291 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF429|SSF53383 BBPR_0297 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24096|PTHR24096:SF193|SSF56801 BBPR_0299 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 BBPR_0300 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004968|IPR006500|IPR027417 DNA primase, phage/plasmid|DNA primase/nucleoside triphosphatase, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF03288|SSF52540|TIGR01613 BBPR_0304 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008687 Bacterial mobilisation PF05713 BBPR_0305 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 BBPR_0306 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR019591|IPR027417 Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF10609|PTHR13696|SSF52540 BBPR_0308 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004843|IPR025197|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Domain of unknown function DUF4116|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PF13475|SSF56300 BBPR_0309 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006119|IPR011109|IPR025827 DNA-binding recombinase domain|Recombinase zinc beta ribbon domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PF13408|PTHR30461|PTHR30461:SF3|SM00857|SSF53041 BBPR_0310 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013216|IPR023149|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase|Trans-aconitate 2-methyltransferase, C-terminal GO:0008152|GO:0008168|GO:0030798 G3DSA:1.10.150.290|G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF890|SSF53335 BBPR_0311 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR10245|PTHR10245:SF47|SM00530|SSF47413 BBPR_0313 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007337 RelB antitoxin/Antitoxin DinJ PF04221 BBPR_0316 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PR00040|PTHR30204|PTHR30204:SF5|SM00422|SSF46955 BBPR_0317 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR020846|IPR024671 Autophagy-related protein 22-like|Major facilitator superfamily domain G3DSA:1.20.1250.20|PF11700|PTHR23519|SSF103473 BBPR_0318 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011611|IPR029056 Carbohydrate kinase PfkB|Ribokinase-like G3DSA:3.40.1190.20|PF00294|PTHR10584|PTHR10584:SF166|SSF53613 BBPR_0319 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|PTHR39080|PTHR39080:SF1|SSF143800|TIGR00009 BBPR_0320 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR006935|IPR012340|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00271|PF04851|PTHR24031|PTHR24031:SF249|SM00487|SM00490|SSF50249|SSF52540 BBPR_0321 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002293|IPR004841 Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0003333|GO:0006810|GO:0015171|GO:0016020|GO:0055085 PF00324|PIRSF006060 BBPR_0324 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF44|SSF118215 BBPR_0325 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|PTHR18895|PTHR18895:SF60|SSF53335 BBPR_0326 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|PTHR23026:SF89|SSF55469 BBPR_0327 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF42|SSF49764 BBPR_0328 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PTHR32125|PTHR32125:SF1|SSF75217 BBPR_0329 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002676|IPR009000|IPR011033|IPR011961 16S rRNA processing protein RimM|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PTHR33692|SSF50346|SSF50447|TIGR02273 BBPR_0330 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009019|IPR020627 K homology domain, prokaryotic type|Uncharacterised protein family UPF0109 GO:0003723 G3DSA:3.30.300.120|MF_00088|PF13083|PTHR34654|SSF54814 BBPR_0331 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000307|IPR020592|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain|Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PS00732|PTHR12919|PTHR12919:SF20|SSF54565|TIGR00002 BBPR_0332 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PR00035|PTHR11751|PTHR11751:SF392|SM00345|SSF46785|SSF53383 BBPR_0333 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PTHR30086|PTHR30086:SF0 BBPR_0334 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 BBPR_0335 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|PTHR11564|PTHR11564:SF7|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 BBPR_0337 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|SSF161111 BBPR_0338 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|PTHR10890|SM00840|SSF47323|SSF52374|TIGR00435 BBPR_0339 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|PR00096|PTHR11922|PTHR11922:SF11|SSF52317 BBPR_0340 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|PTHR19211|PTHR19211:SF55|SM00382|SSF52540 BBPR_0341 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021400 Protein of unknown function DUF3039 PF11238 BBPR_0342 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|PTHR21342|PTHR21342:SF1|SSF52374|TIGR00125|TIGR01510 BBPR_0344 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003772 Protein of unknown function DUF177 PF02620|PTHR34374 BBPR_0345 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|SSF57829|TIGR01031 BBPR_0346 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|PTHR11207|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 BBPR_0347 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF116|SSF52467|SSF52518|TIGR00118 BBPR_0348 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002912|IPR004789|IPR019455 ACT domain|Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0008152|GO:0009082|GO:0016597 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF01842|PF10369|PTHR30239|SSF55021|TIGR00119 BBPR_0350 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002638|IPR006405|IPR007229 Nicotinate phosphoribosyltransferase family|Nicotinate phosphoribosyltransferase pncB-type|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019358 G3DSA:3.20.140.10|PF04095|PIRSF000484|PTHR11098|PTHR11098:SF8|SSF51690|SSF54675|TIGR01513 BBPR_0351 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001247|IPR002381|IPR015847|IPR018336|IPR020568|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|PNPase/RNase PH domain|Ribonuclease PH, conserved site|Ribonuclease phosphorolytic, bacterial-type|Ribosomal protein S5 domain 2-type fold GO:0000049|GO:0004549|GO:0008033 G3DSA:3.30.230.70|MF_00564|PF01138|PF03725|PS01277|PTHR11953|PTHR11953:SF0|SSF54211|SSF55666|TIGR01966 BBPR_0352 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0016787|GO:0017111 G3DSA:3.90.950.10|MF_01405|PF01725|PTHR11067|PTHR11067:SF9|SSF52972 BBPR_0353 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547 BBPR_0354 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001672|IPR018189|IPR023096 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, C-terminal|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:1.10.1390.10|G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|PS00765|PTHR11469|PTHR11469:SF4|SSF53697 BBPR_0359 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PF02308|PR01837|PTHR33778|PTHR33778:SF3 BBPR_0360 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001757|IPR006068|IPR006415|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IIIB GO:0000166|GO:0015444|GO:0015693|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00702|PR01836|PS00154|PTHR24093|PTHR24093:SF128|SSF56784|SSF81653|SSF81665|TIGR01494 BBPR_0362 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR018632|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|C-terminal AAA-associated domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF09821|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 BBPR_0363 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF10|SSF161098 BBPR_0365 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007324|IPR011991 Sugar-binding domain, putative|Winged helix-turn-helix DNA-binding domain GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF04198|PTHR34294|SSF100950 BBPR_0366 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004703|IPR013853 Galactitol permease IIC component|Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0015577|GO:0015796|GO:0016021 PF03611|PIRSF006304|PTHR37324|PTHR37324:SF2 BBPR_0367 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000577|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 G3DSA:3.30.420.40|PF00370|PF02782|PIRSF000538|PS00445|PTHR10196|PTHR10196:SF73|SSF53067 BBPR_0368 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004560|IPR013022 L-ribulose-5-phosphate 3-epimerase|Xylose isomerase-like, TIM barrel domain GO:0005975|GO:0016861 G3DSA:3.20.20.150|PF01261|PTHR12110|PTHR12110:SF20|SSF51658|TIGR00542 BBPR_0369 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|PTHR22789|PTHR22789:SF2|SM01007|SSF53639 BBPR_0370 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|PTHR15680|SSF50104|TIGR01024 BBPR_0371 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000223|IPR015927|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PR00727|PS00761|PTHR12383|PTHR12383:SF14|SSF51306|TIGR02227 BBPR_0372 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001352|IPR012337|IPR024567 Ribonuclease H-like domain|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain GO:0003676|GO:0003723|GO:0004523 G3DSA:3.30.420.10|PF01351|PTHR10954|SSF53098 BBPR_0373 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PTHR30146|SM00354|SSF47413|SSF53822 BBPR_0374 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24096|PTHR24096:SF193|SSF56801 BBPR_0375 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001852|IPR011060|IPR013785 Aldolase-type TIM barrel|Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ|Ribulose-phosphate binding barrel GO:0003824|GO:0008152|GO:0042819|GO:0042823 G3DSA:3.20.20.70|MF_01824|PF01680|PIRSF029271|PS01235|PTHR31829|SSF51366|TIGR00343 BBPR_0376 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002161|IPR021196|IPR029062 Class I glutamine amidotransferase-like|PdxT/SNO family, conserved site|Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 G3DSA:3.40.50.880|MF_01615|PF01174|PIRSF005639|PS01236|PTHR31559|PTHR31559:SF0|SSF52317|TIGR03800 BBPR_0379 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006710|IPR023296 Glycoside hydrolase, family 43|Glycosyl hydrolase, five-bladed beta-propellor domain GO:0004553|GO:0005975 G3DSA:2.115.10.20|PF04616|PTHR22925|SSF75005 BBPR_0381 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PS00356|PTHR30146|PTHR30146:SF30|SM00354|SSF47413|SSF53822 BBPR_0382 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PS00062|PS00063|PS00798|PTHR11732|SSF51430 BBPR_0383 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011089 Domain of unknown function DUF1524 PF07510|PTHR24094|PTHR24094:SF10 BBPR_0384 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 PF01566|PR00447|PTHR11706|PTHR11706:SF42 BBPR_0385 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|PTHR23501|PTHR23501:SF82|SSF103473 BBPR_0387 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007137|IPR011098|IPR023346 G5 domain|Lysozyme-like domain|Resuscitation-promoting factor, domain of unknown function DUF348 G3DSA:1.10.530.10|PF03990|PF07501|SM01208|SSF53955 BBPR_0388 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PTHR10438|PTHR10438:SF266|SSF52833|TIGR01068 BBPR_0389 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR015797|IPR032582 NUDIX hydrolase domain-like|Protein of unknown function DUF4916 GO:0016787 G3DSA:3.90.79.10|PF16262|SSF55811 BBPR_0390 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PTHR10992|SSF53474 BBPR_0391 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR015375|IPR015376|IPR015797|IPR020084 NADH pyrophosphatase-like, N-terminal|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 G3DSA:3.90.79.10|PF00293|PF09296|PF09297|PS00893|PTHR22769|PTHR22769:SF7|SSF55811 BBPR_0392 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005490|IPR022029 L,D-transpeptidase catalytic domain|Putative peptidoglycan binding domain GO:0016740 G3DSA:2.40.440.10|PF03734|PF12229|PTHR30582|PTHR30582:SF2|SSF141523 BBPR_0393 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002930|IPR003016|IPR011053|IPR017453 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|PTHR11715|SSF51230|TIGR00527 BBPR_0394 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR019236 Domain of unknown function DUF2183 PF09949|PTHR28208 BBPR_0395 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001375|IPR002470|IPR023302|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9A, N-terminal domain|Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508|GO:0008236|GO:0070008 G3DSA:2.130.10.120|G3DSA:3.40.50.1820|PF00326|PF02897|PR00862|PTHR11757|PTHR11757:SF3|SSF50993|SSF53474 BBPR_0397 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001804|IPR023698|IPR024084 3-isopropylmalate dehydrogenase|Isocitrate and isopropylmalate dehydrogenases family|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01035|PF00180|PTHR11835|PTHR11835:SF49|SM01329|SSF53659 BBPR_0399 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 G3DSA:3.90.1550.10|PF03099|PTHR12561|PTHR12561:SF7|SSF55681 BBPR_0400 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|SM00100|SM00419|SSF46785|SSF51206 BBPR_0401 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF0|SSF53955|SSF56601 BBPR_0403 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PTHR22893|PTHR22893:SF7|SSF51395 BBPR_0404 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005719|IPR005720|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 2 GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0016020|GO:0016627|GO:0055114 G3DSA:3.20.20.70|PF01180|PTHR11938|SSF51395|TIGR01036 BBPR_0405 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001034|IPR011991|IPR014036|IPR018356 DeoR C-terminal sensor domain|DeoR-type HTH domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PR00037|PS00894|PTHR30363|PTHR30363:SF1|SM00420|SM01134|SSF100950|SSF46785 BBPR_0406 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001937|IPR005849|IPR005850|IPR011146 Galactose-1-phosphate uridyl transferase, C-terminal|Galactose-1-phosphate uridyl transferase, N-terminal|Galactose-1-phosphate uridyl transferase, class I|HIT-like domain GO:0003824|GO:0006012|GO:0008108|GO:0008270 G3DSA:3.30.428.10|PF01087|PF02744|PIRSF000808|PTHR11943|SSF54197|TIGR00209 BBPR_0407 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000705|IPR006203|IPR006204|IPR006206|IPR013750|IPR014721|IPR019539|IPR019741|IPR020568 GHMP kinase N-terminal domain|GHMP kinase, ATP-binding, conserved site|GHMP kinase, C-terminal domain|Galactokinase|Galactokinase galactose-binding domain|Galactokinase, conserved site|Mevalonate/galactokinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004335|GO:0005524|GO:0005737|GO:0006012|GO:0008152|GO:0016301|GO:0016773|GO:0046835 G3DSA:3.30.230.10|G3DSA:3.30.70.890|PF00288|PF08544|PF10509|PIRSF000530|PR00473|PR00959|PS00106|PS00627|PTHR10457|PTHR10457:SF6|SSF54211|SSF55060|TIGR00131 BBPR_0408 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23508|PTHR23508:SF16|SSF103473 BBPR_0410 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022986 Uncharacterised protein family UPF0237, ACT-type G3DSA:3.30.70.260|MF_01054|PF13740|PTHR34875|SSF55021 BBPR_0411 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007841 Uncharacterised protein family UPF0210 G3DSA:3.20.70.20|MF_01221|PF05167|PTHR37560|PTHR37560:SF2|SSF51998 BBPR_0412 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PF13231 BBPR_0413 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PTHR12029|PTHR12029:SF31|SSF75217 BBPR_0414 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008979 Galactose-binding domain-like G3DSA:2.60.120.260|SSF49785 BBPR_0415 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013320 Concanavalin A-like lectin/glucanase domain G3DSA:2.60.120.200|SSF49899 BBPR_0416 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR004036|IPR011257|IPR023170 DNA glycosylase|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00633|PF00730|PF10576|PS00764|PS01155|PTHR10359|PTHR10359:SF1|SM00478|SM00525|SSF48150 BBPR_0418 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR015712|IPR019462 DNA-directed RNA polymerase, beta subunit|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351|GO:0032549 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|PTHR20856|PTHR20856:SF20|SSF64484|TIGR02013 BBPR_0419 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|PTHR19376|PTHR19376:SF32|SM00663|SSF64484|TIGR02386 BBPR_0420 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000253|IPR008984 Forkhead-associated (FHA) domain|SMAD/FHA domain GO:0005515 G3DSA:2.60.200.20|PF00498|SSF49879 BBPR_0422 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PTHR13832|PTHR13832:SF278|SM00331|SM00332|SSF81606 BBPR_0423 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002931 Transglutaminase-like G3DSA:3.90.260.10|PF01841|SSF54001 BBPR_0424 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR34351|PTHR34351:SF1 BBPR_0425 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011703|IPR027417 ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PTHR11603|PTHR11603:SF149|SSF52540 BBPR_0426 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003961|IPR013783 Fibronectin type III|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.40.10|PF00041|SM00060|SSF49265 BBPR_0427 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000719|IPR008271|IPR011009|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00107|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 BBPR_0428 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12705|SSF52540 BBPR_0429 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000212|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF12705|PF13361|PTHR11070|SSF52540 BBPR_0430 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BBPR_0431 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23542|PTHR23542:SF1|SSF103473 BBPR_0433 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007337 RelB antitoxin/Antitoxin DinJ PF04221|TIGR02384 BBPR_0435 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000846|IPR016040|IPR022663|IPR022664|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|PTHR20836|SSF51735|SSF55347|TIGR00036 BBPR_0436 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002220|IPR005263|IPR013785|IPR020624|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|PTHR12128|PTHR12128:SF34|SM01130|SSF51569|TIGR00674 BBPR_0437 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001279|IPR004613|IPR030854 Metallo-beta-lactamase|Ribonuclease J|Ribonuclease J, bacteria GO:0003723|GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0046872|GO:0090501 G3DSA:3.60.15.10|MF_01491|PF12706|PIRSF004803|PTHR11203|PTHR11203:SF22|SM00849|SSF56281|TIGR00649 BBPR_0438 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001930|IPR012778|IPR014782|IPR024571 ERAP1-like C-terminal domain|Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase|Peptidase M1, aminopeptidase|Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0004177|GO:0006508|GO:0008237|GO:0008270 G3DSA:1.10.390.10|PF01433|PF11838|PR00756|PTHR11533|PTHR11533:SF190|SSF55486|SSF63737|TIGR02412 BBPR_0440 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|SSF52743 BBPR_0441 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PTHR22573|PTHR22573:SF15|SSF53738|SSF55957|TIGR01455 BBPR_0442 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PR01576|PTHR10458|SSF56420 BBPR_0444 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004603|IPR011335 DNA mismatch endonuclease vsr|Restriction endonuclease type II-like GO:0004519|GO:0006298 G3DSA:3.40.960.10|PF03852|SSF52980|TIGR00632 BBPR_0445 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF401|SSF53383 BBPR_0446 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003695 Ppx/GppA phosphatase G3DSA:3.30.420.150|PF02541|PTHR30005|SSF53067 BBPR_0447 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025503 Protein of unknown function DUF4391 PF14335 BBPR_0448 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000594|IPR012731|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold|Thiazole biosynthesis adenylyltransferase ThiF GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF153|SSF69572|TIGR02356 BBPR_0449 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001455|IPR001763|IPR027396|IPR032836 DsrE/DsrF/DrsH-like family|DsrEFH-like|Rhodanese-like domain|TusA-like domain G3DSA:3.30.110.40|G3DSA:3.40.1260.10|G3DSA:3.40.250.10|PF00581|PF01206|PF13686|PS01148|PTHR34655|PTHR34655:SF2|SM00450|SSF52821|SSF64307|SSF75169 BBPR_0450 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001910|IPR023186 Inosine/uridine-preferring nucleoside hydrolase|Inosine/uridine-preferring nucleoside hydrolase domain G3DSA:3.90.245.10|PF01156|PTHR12304|PTHR12304:SF4|SSF53590 BBPR_0451 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982 Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|PF00356|PTHR30146|SM00354|SSF47413 BBPR_0452 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 BBPR_0453 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|SSF116842|TIGR01280 BBPR_0454 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|PTHR30008|PTHR30008:SF0|TIGR00237 BBPR_0455 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005144|IPR012833|IPR019777 ATP-cone domain|Formate C-acetyltransferase glycine radical, conserved site|Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 G3DSA:3.20.70.20|PF03477|PF13597|PS00850|PTHR21075|SSF51998|TIGR02487 BBPR_0456 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 G3DSA:3.80.30.10|PF13353|PTHR30352|PTHR30352:SF2|SSF102114|TIGR02491 BBPR_0457 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002731|IPR008275|IPR010327|IPR018709 ATPase, BadF/BadG/BcrA/BcrD type|CoA enzyme activase|CoA enzyme activase, domain of unknown function DUF2229|FldB/FldC dehydratase alpha/beta subunit G3DSA:3.30.420.40|PF01869|PF06050|PF09989|PTHR32329|PTHR32329:SF4|SSF53067|TIGR00241 BBPR_0458 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027304 Trigger factor/SurA domain SSF109998 BBPR_0459 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 PF04107|PIRSF017901|PTHR34378|SSF55931 BBPR_0460 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006626|IPR011050|IPR012334 Parallel beta-helix repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|SM00710|SSF51126 BBPR_0461 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PTHR33164|SM00347|SSF46785 BBPR_0462 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF240|SM00382|SSF52540|SSF90123 BBPR_0463 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF271|SM00382|SSF52540|SSF90123 BBPR_0464 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 PF01734|PTHR14226|PTHR14226:SF25|SSF52151 BBPR_0465 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001920|IPR004391|IPR015942|IPR018187 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PTHR21198|PTHR21198:SF3|SSF53681|TIGR00067 BBPR_0466 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|PF01678|PS01326|PTHR31689|SSF54506|TIGR00652 BBPR_0467 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012932 Vitamin K epoxide reductase PF07884|SM00756 BBPR_0468 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003141|IPR016195 Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260 G3DSA:3.20.20.140|PTHR30007|PTHR30007:SF4|SM00481|SSF89550 BBPR_0469 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021456 Protein of unknown function DUF3107 PF11305 BBPR_0470 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011009 Protein kinase-like domain G3DSA:3.90.1200.10|SSF56112 BBPR_0471 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000212|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF21|SSF52540 BBPR_0472 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018766 Zinicin-like metallopeptidase type 2 PF10103|PTHR39420|PTHR39420:SF2|SSF55486|TIGR03624 BBPR_0473 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008269|IPR014721|IPR020568|IPR027065 Lon protease|Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163 G3DSA:3.30.230.10|PF05362|PTHR10046|PTHR10046:SF48|SSF54211 BBPR_0474 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021412 Protein of unknown function DUF3052 PF11253 BBPR_0475 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|PTHR30146:SF4|SM00354|SSF47413|SSF53822 BBPR_0476 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002767|IPR029756 MTH1187/YkoF-like|Thiamine-binding protein G3DSA:3.30.70.930|PF01910|PTHR33777|SSF89957 BBPR_0477 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like G3DSA:3.40.1190.20|PF08543|PTHR20858|PTHR20858:SF17|SSF53613 BBPR_0478 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR003959|IPR003960|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PS00674|PTHR23077|PTHR23077:SF65|SM00382|SSF52540 BBPR_0480 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002817|IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Phosphomethylpyrimidine synthase|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228|GO:0051536 G3DSA:3.20.20.70|MF_00089|MF_00097|PF01964|PF02581|PTHR30557|PTHR30557:SF1|SSF51391|TIGR00190 BBPR_0481 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000417|IPR029056 Hydroxyethylthiazole kinase|Ribokinase-like GO:0004417|GO:0009228 G3DSA:3.40.1190.20|MF_00228|PF02110|PIRSF000513|PR01099|PTHR20857|PTHR20857:SF19|SSF53613 BBPR_0482 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR003344|IPR006101|IPR006102|IPR006103|IPR006104|IPR008964|IPR008979|IPR011081|IPR011490|IPR013781|IPR013812|IPR017853|IPR032311 Bacterial Ig-related|Big-1 (bacterial Ig-like domain 1) domain|Coagulation factor 5/8 C-terminal domain|Domain of unknown function DUF4982|FIVAR domain|Galactose-binding domain-like|Glycoside hydrolase family 2, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycosyl hydrolases family 2, sugar binding domain|Invasin/intimin cell-adhesion fragments GO:0004553|GO:0005975 G3DSA:1.20.5.420|G3DSA:2.60.120.260|G3DSA:2.60.40.1560|G3DSA:2.60.40.320|G3DSA:2.60.40.920|G3DSA:3.20.20.80|PF00703|PF00754|PF02836|PF02837|PF07532|PF07554|PF16355|PR00132|PTHR10066|PTHR10066:SF71|SSF49303|SSF49373|SSF49785|SSF51445 BBPR_0483 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002314|IPR002315|IPR004154|IPR022961|IPR027031 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Glycine-tRNA ligase, bacterial|Glycyl-tRNA synthetase|Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 GO:0000166|GO:0004812|GO:0004820|GO:0005524|GO:0005737|GO:0006418|GO:0006426 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00253_B|PF00587|PF03129|PR01043|PTHR10745|SSF52954|SSF55681|TIGR00389 BBPR_0484 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001269|IPR004652|IPR013785|IPR018517|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PS01136|PTHR11082|PTHR11082:SF25|SSF51395|TIGR00737 BBPR_0485 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01135|PTHR30314|PTHR30314:SF3|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 BBPR_0486 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007561|IPR023052 Cell division protein SepF|Cell division protein SepF/SepF-related GO:0000917|GO:0090529 MF_01197|PF04472|PTHR35798|PTHR35798:SF1 BBPR_0487 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325 BBPR_0488 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007793|IPR019933 DivIVA domain|DivIVA family PF05103|SSF58113|TIGR03544 BBPR_0489 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PTHR33695|PTHR33695:SF1 BBPR_0490 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002942|IPR006145|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PTHR11079|PTHR11079:SF73|SSF55120|TIGR00005 BBPR_0493 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001451|IPR011004|IPR019875|IPR026586|IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain|Hexapeptide repeat|Trimeric LpxA-like|Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 G3DSA:2.160.10.10|MF_02122|PF14602|PF14789|SSF51161|TIGR03535 BBPR_0495 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000352|IPR004374|IPR005139|IPR014720|IPR020853 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor 2, bacterial|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00094|PF00472|PF03462|PTHR11075|PTHR11075:SF6|SM00937|SSF75620|TIGR00020 BBPR_0496 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR005286|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Cell division protein FtsE, ATP-binding|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0051301 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF470|SM00382|SSF52540|TIGR02673 BBPR_0497 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838|IPR004513 ABC transporter permease protein domain|Cell division protein FtsX GO:0007049|GO:0016020|GO:0016021 PF02687|PIRSF003097|PTHR30489 BBPR_0498 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007921 CHAP domain PF05257|SSF54001 BBPR_0499 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|PTHR30308|PTHR30308:SF2|SSF74982|TIGR00086 BBPR_0500 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PF00849|PS01129|PTHR11079|PTHR11079:SF61|SSF55120 BBPR_0504 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR019932|IPR019933 Conserved hypothetical protein CHP03543|DivIVA domain TIGR03543|TIGR03544 BBPR_0505 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|PTHR30525|PTHR30525:SF0|SSF51735|SSF55347|SSF69055|TIGR00243 BBPR_0507 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004588|IPR011005|IPR013785|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Aldolase-type TIM barrel|Dihydropteroate synthase-like GO:0003824|GO:0005506|GO:0008299|GO:0016114|GO:0044237|GO:0046429|GO:0055114 G3DSA:3.20.20.70|MF_00159|PF04551|PIRSF004640|PTHR30454|SSF51717|SSF56014|TIGR00612 BBPR_0508 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BBPR_0509 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|MF_00201|PF02565|PF11967|PTHR33991|SSF50249|SSF57863|TIGR00613 BBPR_0510 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055 BBPR_0511 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR015315 Protein of unknown function DUF1963 G3DSA:2.30.320.10|PF09234|PTHR36436|PTHR36436:SF1|SSF103032 BBPR_0513 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013148|IPR023296 Glycosyl hydrolase family 32, N-terminal|Glycosyl hydrolase, five-bladed beta-propellor domain PF00251|PTHR30175|PTHR30175:SF0|SSF75005 BBPR_0514 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003141|IPR004013|IPR004365|IPR004805|IPR011708|IPR012340|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF01336|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF0|SM00481|SSF89550|TIGR00594 BBPR_0515 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR026870 Zinc-ribbon domain PF13240 BBPR_0516 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001890 RNA-binding, CRM domain GO:0003723 G3DSA:3.30.110.60|PD010559|PF01985|PTHR31846|SM01103|SSF75471 BBPR_0517 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010354|IPR023753 FAD/NAD(P)-binding domain|Oleate hydratase GO:0006631|GO:0016491|GO:0050151|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF06100|PTHR37417|PTHR37417:SF1|SSF51905 BBPR_0518 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011991|IPR013196|IPR026881 Helix-turn-helix, type 11|WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08279|PF13280 BBPR_0519 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PS00062|PS00063|PS00798|PTHR11732|SSF51430 BBPR_0520 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PS00798|PTHR11732|SSF51430 BBPR_0521 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR020378 Protein of unknown function DUF4186 PD076485|PF13811 BBPR_0523 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011335 Restriction endonuclease type II-like PTHR37044|SSF52980 BBPR_0524 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|PTHR21256|SSF53720|TIGR00069 BBPR_0525 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001917|IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PS00599|PTHR11751|PTHR11751:SF398|SSF53383 BBPR_0526 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000807|IPR020565|IPR020568 Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|PS00955|PTHR23133|PTHR23133:SF2|SSF54211 BBPR_0528 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|PTHR21235|PTHR21235:SF1|SSF52317|TIGR01855 BBPR_0529 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006062|IPR010188|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Bifunctional HisA/TrpF|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Ribulose-phosphate binding barrel GO:0000105|GO:0000162|GO:0003824|GO:0003949|GO:0004640|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01014|PF00977|PTHR21235|PTHR21235:SF15|SSF51366|TIGR01919 BBPR_0530 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018721 Protein of unknown function DUF2252 PF10009|PTHR39441 BBPR_0531 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004809|IPR008146|IPR008147|IPR014746|IPR027303 Glutamine synthetase type I|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00181|PTHR20852|PTHR20852:SF7|SM01230|SSF54368|SSF55931|TIGR00653 BBPR_0532 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029050|IPR031989 Domain of unknown function DUF5067|Immunoprotective extracellular, immunoglobulin-like domain G3DSA:2.60.40.1240|PF16729 BBPR_0535 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR007502|IPR010222|IPR011545|IPR011709|IPR014001|IPR024590|IPR027417 DEAD/DEAH box helicase domain|Domain of unknown function DUF1605|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase HrpA|RNA helicase HrpA, C-terminal GO:0003676|GO:0004004|GO:0004386|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF04408|PF07717|PF11898|PTHR18934|PTHR18934:SF109|SM00487|SM00490|SM00847|SSF52540|TIGR01967 BBPR_0536 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007848|IPR029063 Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|PF05175|PTHR18895|PTHR18895:SF72|SSF53335 BBPR_0538 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|TIGR03156 BBPR_0539 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001236|IPR001557|IPR011304|IPR015955|IPR016040|IPR018177|IPR022383 L-lactate dehydrogenase|L-lactate dehydrogenase, active site|L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|NAD(P)-binding domain GO:0003824|GO:0004459|GO:0005737|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_00488|PF00056|PF02866|PIRSF000102|PR00086|PS00064|PTHR11540|PTHR11540:SF3|SSF51735|SSF56327|TIGR01771 BBPR_0540 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PTHR11562|PTHR11562:SF17|SSF160240|SSF161111|TIGR01297 BBPR_0541 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006197|IPR006199|IPR006200|IPR011991|IPR015927|IPR019759|IPR028360 LexA repressor, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004252|GO:0006355|GO:0006508|GO:0009432|GO:0045892 G3DSA:1.10.10.10|G3DSA:2.10.109.10|MF_00015|PF00717|PF01726|PR00726|PTHR33516|PTHR33516:SF2|SSF46785|SSF51306|TIGR00498 BBPR_0543 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018392 LysM domain G3DSA:3.10.350.10|PF01476|SM00257|SSF54106 BBPR_0544 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|PTHR30455|PTHR30455:SF2|TIGR00244 BBPR_0545 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006139|IPR006140|IPR016040|IPR029015|IPR029752 D-3-phosphoglycerate dehydrogenase, type2|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0004617|GO:0006564|GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PTHR10996|PTHR10996:SF18|SSF51735|SSF52283|SSF55021 BBPR_0546 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000212|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0004003|GO:0005524 G3DSA:3.40.50.300|PF13245|PTHR11070|PTHR11070:SF25|SSF52540 BBPR_0547 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003444|IPR020603 MraZ domain|Transcriptional regulator MraZ GO:0003700|GO:0006355 MF_01008|PD006745|PF02381|PTHR34701|SSF89447|TIGR00242 BBPR_0548 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|PTHR11265|PTHR11265:SF0|SSF53335|SSF81799|TIGR00006 BBPR_0550 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF1|SSF56519|SSF56601 BBPR_0551 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 SSF63418 BBPR_0552 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000713|IPR004101|IPR005863|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_02019|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF3|SSF53244|SSF53623|SSF63418|TIGR01143 BBPR_0553 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|PTHR22926|PTHR22926:SF5|TIGR00445 BBPR_0554 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004101|IPR005762|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|PTHR23135|PTHR23135:SF2|SSF51984|SSF53244|SSF53623|TIGR01087 BBPR_0555 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001182|IPR018365 Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021|GO:0051301 PF01098|PS00428|PTHR30474|PTHR30474:SF2 BBPR_0556 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|PTHR21015|PTHR21015:SF22|SSF53756 BBPR_0557 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF5|SSF51984|SSF53244|SSF53623|TIGR01082 BBPR_0558 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013685 Polypeptide-transport-associated, FtsQ-type PF08478|PTHR37820 BBPR_0560 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003732|IPR023509 D-Tyr tRNAtyr deacylase-like domain|D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 G3DSA:3.50.80.10|MF_00518|PF02580|PTHR10472|SSF69500|TIGR00256 BBPR_0561 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23514|PTHR23514:SF7|SSF103473 BBPR_0562 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011611|IPR029056 Carbohydrate kinase PfkB|Ribokinase-like G3DSA:3.40.1190.20|PF00294|PTHR10584|PTHR10584:SF188|SSF53613 BBPR_0563 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PS01125|PTHR18964|PTHR18964:SF123|SSF46785|SSF53067 BBPR_0564 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005627|IPR023648 Copper homeostasis CutC domain|Copper homeostasis protein CutC GO:0005507|GO:0055070 G3DSA:3.20.20.380|PF03932|PTHR12598|PTHR12598:SF0|SSF110395 BBPR_0565 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PS01125|PTHR18964|PTHR18964:SF123|SSF46785|SSF53067 BBPR_0566 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004547|IPR006148|IPR018321 Glucosamine-6-phosphate isomerase|Glucosamine-6-phosphate isomerase, conserved site|Glucosamine/galactosamine-6-phosphate isomerase GO:0004342|GO:0005975|GO:0006044 G3DSA:3.40.50.1360|MF_01241|PF01182|PS01161|PTHR11280|SSF100950|TIGR00502 BBPR_0567 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003764|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PIRSF038994|PTHR11113|PTHR11113:SF7|SSF51338|SSF51556|TIGR00221 BBPR_0568 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF7|SSF53850 BBPR_0569 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF30|SSF161098 BBPR_0570 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF10|SSF161098 BBPR_0571 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF586|SM00382|SSF52540 BBPR_0572 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000994|IPR007865|IPR028980|IPR029149 Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0004177|GO:0030145 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF05195|PTHR10804|PTHR10804:SF17|SM01011|SSF53092|SSF55920 BBPR_0573 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|PTHR22769|SSF55811 BBPR_0575 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001645|IPR004101|IPR013221|IPR018109 Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02875|PF08245|PS01012|PTHR11136|PTHR11136:SF0|SSF53244|SSF53623|TIGR01499 BBPR_0576 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003395|IPR010935|IPR011890|IPR024704|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal|SMCs flexible hinge|Structural maintenance of chromosomes protein|Structural maintenance of chromosomes protein, prokaryotic GO:0005515|GO:0005524|GO:0005694|GO:0007062|GO:0030261|GO:0051276 G3DSA:3.40.50.300|MF_01894|PF02463|PF06470|PIRSF005719|PTHR18937|PTHR18937:SF261|SM00968|SSF52540|SSF75553|TIGR02168 BBPR_0577 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001920|IPR004380|IPR015942|IPR018187|IPR033134 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu racemase, active site 2|Asp/Glu/hydantoin racemase|Aspartate racemase GO:0006520|GO:0006807|GO:0008152|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|PF01177|PS00923|PS00924|PTHR21198|PTHR21198:SF6|SSF53681|TIGR00035 BBPR_0578 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013815|IPR013816 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2 GO:0003824|GO:0005524 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|SSF56059 BBPR_0579 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|SSF53383 BBPR_0580 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13480|SSF55729 BBPR_0581 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|PF02875|PF08245|PTHR23135|PTHR23135:SF4|SSF53244|SSF53623|SSF63418|TIGR01085 BBPR_0582 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 BBPR_0584 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008183|IPR011013|IPR014718 Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0016853|GO:0030246 G3DSA:2.70.98.10|PF01263|PTHR10091|SSF74650 BBPR_0585 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|PTHR30426|TIGR00216 BBPR_0586 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004369|IPR007214 Prolyl-tRNA editing protein, YbaK/EbsC|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PIRSF006181|PTHR30411|PTHR30411:SF0|SSF55826|TIGR00011 BBPR_0587 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PTHR10836|PTHR10836:SF57|SM00846|SSF51735|SSF55347|TIGR01534 BBPR_0588 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006282|IPR007371|IPR007373 Thiamin pyrophosphokinase|Thiamin pyrophosphokinase, catalytic domain|Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0004788|GO:0005524|GO:0006772|GO:0009229|GO:0030975 G3DSA:2.60.120.320|G3DSA:3.40.50.10240|PF04263|PF04265|PTHR41299|PTHR41299:SF1|SM00983|SSF63862|SSF63999|TIGR01378 BBPR_0591 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001288|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PTHR10938|SSF54364|SSF55200|TIGR00168 BBPR_0592 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|PTHR33343|SSF143034|TIGR00001 BBPR_0593 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|PTHR10986|PTHR10986:SF12|SSF74731|TIGR01032 BBPR_0594 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002104|IPR004107|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01807|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF56349|TIGR02225 BBPR_0595 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF78|SSF52540 BBPR_0596 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003768 Segregation and condensation protein A PF02616|PTHR33969|PTHR33969:SF2 BBPR_0597 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005234|IPR011991 Chromosome segregation/condensation protein ScpB|Winged helix-turn-helix DNA-binding domain GO:0051304 G3DSA:1.10.10.10|PF04079|PIRSF019345|PTHR34298|PTHR34298:SF2|SSF46785|TIGR00281 BBPR_0598 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR011991|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like|Winged helix-turn-helix DNA-binding domain GO:0016787 G3DSA:1.10.10.10|G3DSA:3.90.79.10|PF00293|PTHR22769|PTHR22769:SF42|SSF46785|SSF55811 BBPR_0599 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003473|IPR023515 Quinolinate synthase A, type 3|Quinolinate synthetase A GO:0008987|GO:0009435|GO:0016765|GO:0051539 MF_00569|PF02445|PTHR30573|PTHR30573:SF0|SSF142754|TIGR00550 BBPR_0600 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003953|IPR005288|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PR00368|PR00411|PTHR11632|PTHR11632:SF27|SSF46977|SSF51905|SSF56425|TIGR00551 BBPR_0601 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|PTHR32179|SSF51690|SSF54675|TIGR00078 BBPR_0602 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00595|PTHR11601|PTHR11601:SF20|SSF53383 BBPR_0603 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417|IPR031157 Elongation factor G, III-V domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF14|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 BBPR_0605 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PTHR21022|PTHR21022:SF0|SSF53850|SSF55021 BBPR_0606 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:3.40.50.720|PF02153|PTHR21363|SSF48179|SSF51735 BBPR_0608 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF56349 BBPR_0609 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF24|SSF161098 BBPR_0610 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF2|SSF161098 BBPR_0611 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF535|SM00382|SSF52540|TIGR01727 BBPR_0612 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000914 Solute-binding protein family 5 domain G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PTHR30290|SSF53850 BBPR_0613 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000169|IPR004134|IPR025660 Cysteine peptidase, cysteine active site|Cysteine peptidase, histidine active site|Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 G3DSA:3.90.70.10|PF03051|PIRSF005700|PS00139|PS00639|PTHR10363|SSF54001 BBPR_0614 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004808|IPR005135 AP endonuclease 1|Endonuclease/exonuclease/phosphatase GO:0004518|GO:0006281 G3DSA:3.60.10.10|PF03372|PTHR22748|SSF56219|TIGR00633 BBPR_0615 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022183 Protein of unknown function DUF3710 PF12502 BBPR_0616 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR016566 Uncharacterised conserved protein UCP010219 PF11361|PIRSF010219 BBPR_0617 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002792|IPR010280|IPR012340|IPR029063|IPR030390 (Uracil-5)-methyltransferase family|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|S-adenosyl-L-methionine-dependent methyltransferase|TRAM domain GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|PF01938|PF05958|PS01230|PTHR11061|PTHR11061:SF30|SSF50249|SSF53335 BBPR_0618 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|SSF53822 BBPR_0619 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00702|PR00119|PR00120|PS00154|PTHR24093|PTHR24093:SF298|SSF56784|SSF81653|SSF81665|TIGR01494 BBPR_0620 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR015932|IPR015937|IPR018136 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron-responsive element-binding protein 2|Aconitase/isopropylmalate dehydratase GO:0008152 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF1|SSF52016|SSF53732|TIGR01341 BBPR_0622 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007569|IPR011335 Domain of unknown function DUF559|Restriction endonuclease type II-like PF04480|PTHR37044|SSF52980 BBPR_0623 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF11|SSF143975|SSF52016|TIGR00110 BBPR_0624 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003716|IPR006110|IPR012293 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|PTHR34476|SM01409|SSF63562|TIGR00690 BBPR_0625 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|PTHR11964|SSF55973|TIGR01034 BBPR_0626 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PTHR30580 BBPR_0627 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|PTHR12725|PTHR12725:SF63|SSF56784|TIGR01509 BBPR_0628 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PTHR11138|SSF50486|SSF53328|TIGR00460 BBPR_0629 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006383|IPR023190|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF12710|PTHR10000|PTHR10000:SF7|SSF56784|TIGR00338|TIGR01488 BBPR_0630 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR003959|IPR003960|IPR022482|IPR027417|IPR032501 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Proteasomal ATPase, OB/ID domain|Proteasome ATPase GO:0000502|GO:0005524|GO:0010498|GO:0016887|GO:0019941 G3DSA:3.40.50.300|MF_02112|PF00004|PF16450|PS00674|PTHR23077|SM00382|SSF52540|TIGR03689 BBPR_0631 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004347|IPR022366 Pup deamidase|Pup ligase/deamidase GO:0008233|GO:0010498|GO:0016811|GO:0019941 PF03136|PIRSF018077|PTHR42307|PTHR42307:SF2|TIGR03688 BBPR_0632 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000760 Inositol monophosphatase GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PTHR20854|PTHR20854:SF4|SSF56655 BBPR_0633 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008515 Ubiquitin-like, Pup PF05639|TIGR03687 BBPR_0634 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004347|IPR022279 Pup ligase/deamidase|Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 PF03136|PTHR42307|PTHR42307:SF1|TIGR03686 BBPR_0635 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PTHR33175|SM00411|SSF47729 BBPR_0636 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|TIGR00374 BBPR_0637 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000362|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase PurB, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0006188 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|PTHR11444|PTHR11444:SF17|SSF48557 BBPR_0638 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012908|IPR029058 Alpha/Beta hydrolase fold|GPI inositol-deacylase PGAP1-like GO:0016788 G3DSA:3.40.50.1820|PF07819|SSF53474 BBPR_0642 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|SM00327|SSF53300 BBPR_0643 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|SSF53300 BBPR_0645 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR33608 BBPR_0646 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF148|SSF52540 BBPR_0647 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002043|IPR005122|IPR018085 Uracil-DNA glycosylase|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|PTHR11264|PTHR11264:SF5|SM00986|SM00987|SSF52141 BBPR_0648 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain PF13399 BBPR_0649 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 BBPR_0650 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|SSF48592|SSF52029|SSF54849|TIGR02348 BBPR_0651 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010310 Type VII secretion system ESAT-6-like G3DSA:1.10.287.1060|PF06013|SSF140453|TIGR03930 BBPR_0653 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF602|SM00448|SM00862|SSF46894|SSF52172 BBPR_0654 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 BBPR_0655 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002059|IPR011129|IPR012340 Cold shock protein|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PR00050|PTHR11544|PTHR11544:SF43|SM00357|SSF50249 BBPR_0656 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021391 Protein of unknown function DUF3027 PF11228 BBPR_0657 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF26|SSF52402 BBPR_0658 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001270|IPR001943|IPR003593|IPR003959|IPR004176|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase|UVR domain GO:0005515|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02151|PF02861|PF07724|PF10431|PR00300|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923 BBPR_0663 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007139 Protein of unknown function DUF349 PF03993 BBPR_0664 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004154|IPR004516 Anticodon-binding|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 G3DSA:3.30.930.10|G3DSA:3.40.50.800|PF03129|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF1|SSF52954|SSF55681 BBPR_0665 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR018150|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|PTHR22594|PTHR22594:SF5|SSF50249|SSF55261|SSF55681|TIGR00459 BBPR_0666 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|SM00421|SSF46894|SSF52172 BBPR_0667 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PTHR30411|PTHR30411:SF1|SSF55826 BBPR_0668 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF474|SM00382|SSF52540 BBPR_0669 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001320|IPR001638|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0004970|GO:0005215|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|PTHR18966:SF207|SM00062|SM00079|SSF53850 BBPR_0670 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|PTHR30614:SF7|SSF161098|TIGR01726 BBPR_0671 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|SSF161098|TIGR01726 BBPR_0672 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022300|IPR022488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase-2-related|Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 G3DSA:3.40.50.300|PF03976|PTHR34383|SSF52540|TIGR03709 BBPR_0673 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR011545|IPR014001|IPR021904|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3516 GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF12029|PTHR12131|PTHR12131:SF4|SM00487|SM00490|SSF52540 BBPR_0674 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR003959|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0006260 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PF16193|PTHR13779|PTHR13779:SF7|SM00382|SSF48019|SSF52540 BBPR_0675 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|PTHR23501|SSF103473 BBPR_0676 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003339|IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC/ECF transporter, transmembrane component|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02361|PS00211|PTHR24220|PTHR24220:SF66|SM00382|SSF52540 BBPR_0677 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR024529|IPR025720 ECF transporter, Riboflavin transporter RibU|ECF transporter, substrate-specific component GO:0005215|GO:0005886|GO:0032217|GO:0032218 PF12822|PIRSF037778|PTHR38438|PTHR38438:SF1 BBPR_0679 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF138|SSF53067 BBPR_0680 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|SSF53383 BBPR_0681 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF70|SM00382|SSF52540 BBPR_0684 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BBPR_0685 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001357|IPR001679|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR033136 BRCT domain|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03119|PF03120|PF12826|PS01055|PS01056|PTHR23389|PTHR23389:SF9|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 BBPR_0686 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002744|IPR019591|IPR027417 Domain of unknown function DUF59|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PTHR23264|PTHR23264:SF19|SSF117916|SSF52540 BBPR_0687 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011335 Restriction endonuclease type II-like PTHR37044|SSF52980 BBPR_0688 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PTHR20852|PTHR20852:SF15|SM01230|SSF54368|SSF55931|TIGR00653 BBPR_0689 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025445 Protein of unknown function DUF4191 PD037701|PF13829 BBPR_0690 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004099|IPR012999|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF125|SSF51905|SSF55424 BBPR_0691 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021403 Protein of unknown function DUF3043 PF11241 BBPR_0692 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PTHR11014|PTHR11014:SF15|SSF53187 BBPR_0693 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002477 Peptidoglycan binding-like G3DSA:1.10.101.10 BBPR_0694 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 BBPR_0696 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001764|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 G3DSA:3.20.20.300|PF00933|PTHR30480|PTHR30480:SF7|SSF51445 BBPR_0697 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005372 Uncharacterised protein family UPF0182 GO:0016021 MF_01600|PF03699|PTHR39344 BBPR_0698 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 PF04464|PTHR37316|SSF53756 BBPR_0699 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 PF04464|PTHR37316|PTHR37316:SF2|SSF53756 BBPR_0700 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BBPR_0702 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001228|IPR018294|IPR029044 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0050518 G3DSA:3.90.550.10|MF_00108|PF01128|PS01295|PTHR32125|PTHR32125:SF4|SSF53448|TIGR00453 BBPR_0703 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|SSF51735 BBPR_0704 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PTHR30413|PTHR30413:SF8 BBPR_0705 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF117|SM00382|SSF52540 BBPR_0706 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|PTHR23091|PTHR23091:SF187|SSF55729 BBPR_0707 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|PS01196|PTHR17224|SSF53178|TIGR00447 BBPR_0708 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|PTHR14025|PTHR14025:SF21|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 BBPR_0709 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005801|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0009058 G3DSA:3.60.120.10|PF00425|PR00095|PTHR11236|SSF56322 BBPR_0710 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|PTHR11825:SF55|SSF56752 BBPR_0711 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|PTHR11902|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 BBPR_0712 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PF04977 BBPR_0713 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007511 Protein of unknown function DUF501 PF04417|PTHR37163|PTHR37163:SF1 BBPR_0714 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003695 Ppx/GppA phosphatase G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PTHR30005|PTHR30005:SF1|SSF53067 BBPR_0716 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004644|IPR005130|IPR005131|IPR029009 Allosteric substrate binding domain|Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0051539 G3DSA:3.30.1330.90|PF03313|PF03315|PTHR30182|PTHR30182:SF1|SSF143548|TIGR00720 BBPR_0717 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type GO:0006457 G3DSA:3.10.50.40|PF00254|PTHR10516|PTHR10516:SF320|SSF54534 BBPR_0718 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001437|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|PTHR30437|SSF46557|SSF54534 BBPR_0721 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PF03006|PTHR20855 BBPR_0722 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR011495|IPR013656|IPR022066 Histidine kinase-like ATPase, C-terminal domain|PAS fold-4|Signal transduction histidine kinase|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain G3DSA:3.30.565.10|PF02518|PF07568|PF08448|PF12282|PTHR24423|PTHR24423:SF472|SM00387|SSF55874 BBPR_0723 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003482 Transcription factor WhiB MF_01479|PF02467|PTHR38839|PTHR38839:SF3 BBPR_0724 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002543|IPR003593|IPR027417 AAA+ ATPase domain|FtsK domain|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PTHR22683|PTHR22683:SF1|SM00382|SSF52540 BBPR_0725 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004474 Cell envelope-related transcriptional attenuator domain PF03816|PTHR33392|PTHR33392:SF6|TIGR00350 BBPR_0726 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003482 Transcription factor WhiB MF_01479|PF02467|PTHR38839|PTHR38839:SF4 BBPR_0727 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|SSF53448 BBPR_0729 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010428 Zinicin-like metallopeptidase PF06262|SSF55486 BBPR_0730 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005002|IPR006379|IPR023214 Eukaryotic phosphomannomutase|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0004615|GO:0005737|GO:0009298 G3DSA:3.40.50.1000|PF03332|SSF56784|TIGR01484 BBPR_0731 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029057 Phosphoribosyltransferase-like G3DSA:3.40.50.2020|PTHR11907|PTHR11907:SF9|SSF53271 BBPR_0732 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006197|IPR015927|IPR019759|IPR028360 Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677|GO:0006355 G3DSA:2.10.109.10|PF00717|PR00726|PTHR33516|SSF51306 BBPR_0733 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 BBPR_0734 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF292|SM00448|SM00862|SSF46894|SSF52172 BBPR_0735 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|PTHR10357|PTHR10357:SF160|SM00642|SSF51011|SSF51445|SSF81296|TIGR01515 BBPR_0736 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003711 CarD-like/TRCF domain PF02559|PTHR38447|SM01058|SSF141259 BBPR_0737 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003526|IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|SSF69765|TIGR00151 BBPR_0738 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001626|IPR029022 ABC transporter, BtuC-like|ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 G3DSA:1.10.3470.10|PF00950|PTHR30477|PTHR30477:SF0|SSF81345 BBPR_0739 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|SM00382|SSF52540 BBPR_0740 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PTHR30477|PTHR30477:SF1|SSF53807 BBPR_0741 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000672|IPR016040|IPR020630|IPR020631 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PTHR10025|SSF51735|SSF53223 BBPR_0742 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PR00681|PTHR10724|PTHR10724:SF6|SM00316|SSF50249 BBPR_0744 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|PTHR10695|SSF52540|TIGR00152 BBPR_0745 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|PTHR24029|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 BBPR_0746 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005496|IPR022369 Integral membrane protein TerC|Integral membrane protein TerC, riboswitch-linked GO:0016021 PF03741|PTHR30238|PTHR30238:SF0|TIGR03718 BBPR_0747 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|PTHR11817|SSF50800|SSF51621|SSF52935|TIGR01064 BBPR_0748 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR11839|PTHR11839:SF9|SSF55811 BBPR_0749 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001789|IPR005561|IPR011006|IPR011991 ANTAR domain|CheY-like superfamily|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF03861|PTHR26402|PTHR26402:SF474|SM00448|SM01012|SSF52172 BBPR_0750 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001098|IPR002298|IPR002421|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060 5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0006261 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF02739|PR00868|PS00447|PTHR10133|PTHR10133:SF27|SM00279|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 BBPR_0751 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002678 GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.40.1390.30|PF01784|PTHR13799|PTHR13799:SF13|SSF102705|TIGR00486 BBPR_0752 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR11839|PTHR11839:SF9|SSF55811 BBPR_0753 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004193|IPR006047|IPR011837|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 Glycogen debranching enzyme, GlgX type|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005980 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02922|PTHR10357|PTHR10357:SF74|SM00642|SSF51011|SSF51445|SSF81296|TIGR02100 BBPR_0755 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 BBPR_0756 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005320|IPR029062 Class I glutamine amidotransferase-like|Peptidase S51 GO:0006508|GO:0008236 G3DSA:3.40.50.880|PF03575|PTHR20842|SSF52317 BBPR_0757 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00885|PTHR21090|PTHR21090:SF5|SSF55205|TIGR01356 BBPR_0758 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 BBPR_0759 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002505|IPR004614 Phosphate acetyl/butaryl transferase|Phosphate acetyltransferase GO:0008152|GO:0016407|GO:0016746 G3DSA:3.40.50.10750|PF01515|PTHR23406|PTHR23406:SF3|SSF53659|TIGR00651 BBPR_0760 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR014999 Uncharacterised protein family UPF0371 G3DSA:1.20.1570.10|G3DSA:3.10.630.10|PF08903 BBPR_0763 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010718 Protein of unknown function DUF1294 PF06961|PTHR41336|PTHR41336:SF1 BBPR_0767 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF2|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 BBPR_0768 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005593|IPR009014|IPR018969|IPR018970|IPR019789|IPR019790|IPR023962|IPR029061 Probable phosphoketolase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0003824|GO:0005975|GO:0008152|GO:0016832 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_01403|PF03894|PF09363|PF09364|PIRSF017245|PS60002|PS60003|PTHR31273|PTHR31273:SF0|SSF52518 BBPR_0769 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384|PTHR11101 BBPR_0770 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018445 Putative phosphate transport regulator PF01865|PTHR37298 BBPR_0771 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 BBPR_0772 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PF07730|PTHR24421|PTHR24421:SF10|SSF55874 BBPR_0773 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006068|IPR023298 Cation-transporting P-type ATPase, C-terminal|P-type ATPase, transmembrane domain G3DSA:1.20.1110.10|PF00689|SSF81665 BBPR_0774 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR025302|IPR027417 AAA+ ATPase domain|ABC transporter-like|Domain of unknown function DUF4162|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF13732|PTHR24220|SM00382|SSF52540 BBPR_0775 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PF12698 BBPR_0776 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PF12698 BBPR_0777 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007421|IPR011991|IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain|Schlafen, AAA domain|Winged helix-turn-helix DNA-binding domain GO:0005524 G3DSA:1.10.10.10|PF04326|PF13749|PTHR30595|PTHR30595:SF6|SSF46785 BBPR_0778 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012337|IPR025246 Ribonuclease H-like domain|Transposase IS30-like HTH domain GO:0003676 G3DSA:3.30.420.10|PF13936|PTHR10948|SSF53098 BBPR_0780 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005053 MobA/MobL protein PF03389 BBPR_0781 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33215|SSF46689 BBPR_0782 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|PTHR32552|SSF53098 BBPR_0783 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002052|IPR025247 Adenine-specific methylase EcoRI|DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PF13651|PS00092 BBPR_0785 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF2|SSF52499 BBPR_0787 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|PF01380|PTHR10937|PTHR10937:SF0|SSF53697|SSF56235 BBPR_0788 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 G3DSA:3.40.50.10490|PTHR10937|PTHR10937:SF0|SSF53697 BBPR_0789 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085 PF00860|PS01116|PTHR11119|TIGR00801|TIGR03173 BBPR_0790 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000836|IPR010079|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like|Xanthine phosphoribosyltransferase GO:0009116|GO:0016763|GO:0043101|GO:0046110 G3DSA:3.40.50.2020|MF_01184|PF00156|PTHR11776|PTHR11776:SF1|SSF53271|TIGR01744 BBPR_0791 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002656|IPR013830 Acyltransferase 3|SGNH hydrolase-type esterase domain GO:0016747 PF01757|PTHR23028|PTHR23028:SF53|SSF52266 BBPR_0792 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000212|IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF7|SSF52540 BBPR_0793 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025531 Protein of unknown function DUF4418 PF14387 BBPR_0794 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30287|SSF144091 BBPR_0795 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 BBPR_0796 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR022801 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|PTHR11831|PTHR11831:SF4|SM00363|SM01390|SSF55174|TIGR01017 BBPR_0797 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002656|IPR013830 Acyltransferase 3|SGNH hydrolase-type esterase domain GO:0016747 G3DSA:3.40.50.1110|PF01757|PTHR23028|PTHR23028:SF53|SSF52266 BBPR_0798 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001345|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 G3DSA:3.40.50.1240|PF00300|PS00175|PTHR23029|PTHR23029:SF29|SM00855|SSF53254 BBPR_0799 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009293 Uncharacterised protein family UPF0478 PF06103 BBPR_0801 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|PTHR11777|PTHR11777:SF9|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 BBPR_0802 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|PTHR33317|SM00732|SSF53098|TIGR00250 BBPR_0803 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003770 Uncharacterised protein family UPF0755, YceG-like PF02618|PTHR30518|PTHR30518:SF2|TIGR00247 BBPR_0804 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478 BBPR_0805 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PTHR21085|PTHR21085:SF0|SSF103263|TIGR00033 BBPR_0806 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000623|IPR016037|IPR027417|IPR030960|IPR031322 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase GO:0003856|GO:0005737|GO:0009073 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|G3DSA:3.40.50.300|MF_00109|MF_00110|PF01202|PF01761|PR01100|PTHR21090|SSF52540|SSF56796|TIGR01357 BBPR_0807 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|PTHR21272|SSF52304|TIGR01088 BBPR_0809 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF458|SM00421|SM00448|SSF46894|SSF52172 BBPR_0810 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023365 Sortase domain G3DSA:2.40.260.10|SSF63817 BBPR_0811 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|PTHR11550|SSF52317|SSF52540|TIGR00337 BBPR_0812 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000825|IPR010231 SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|PTHR30508|PTHR30508:SF1|SSF101960|TIGR01980 BBPR_0813 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000825|IPR011542 SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufD GO:0016226 PF01458|PTHR30508|PTHR30508:SF0|SSF101960|TIGR01981 BBPR_0814 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR010230|IPR027417 AAA+ ATPase domain|ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF85|SM00382|SSF52540|TIGR01978 BBPR_0815 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PS00595|PTHR11601|PTHR11601:SF17|SSF53383|TIGR01979 BBPR_0816 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|PTHR10093|SSF82649|TIGR01994 BBPR_0817 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002744 Domain of unknown function DUF59 PF01883|PTHR13696|PTHR13696:SF62|SSF117916 BBPR_0818 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005835|IPR005836|IPR011004|IPR011831|IPR023049|IPR029044 ADP-glucose pyrophosphorylase, conserved site|Glucose-1-phosphate adenylyltransferase|Glucose-1-phosphate adenylyltransferase GlgC, bacterial|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|Trimeric LpxA-like GO:0005978|GO:0008878|GO:0009058|GO:0016779 G3DSA:3.90.550.10|MF_00624|PF00483|PS00808|PS00809|PTHR22572|PTHR22572:SF10|SSF51161|SSF53448|TIGR02091 BBPR_0819 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001537|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PTHR12029|PTHR12029:SF52|SSF55315|SSF75217 BBPR_0820 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:3.40.1280.10|PF04452|PIRSF015601|PTHR30027|SSF75217|SSF88697|TIGR00046 BBPR_0821 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001310|IPR011146 HIT-like domain|Histidine triad (HIT) protein GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|PTHR23089|PTHR23089:SF2|SSF54197 BBPR_0822 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|PTHR30473|PTHR30473:SF1|SSF52540 BBPR_0823 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002036|IPR020549|IPR023091 Endoribonuclease YbeY|Endoribonuclease YbeY, conserved site|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|PS01306|PTHR22881|SSF55486|TIGR00043 BBPR_0824 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000644|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PTHR22777|PTHR22777:SF17|SM00116|SM01091|SSF54631|SSF56176 BBPR_0825 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PTHR11649|PTHR11649:SF3|SSF52540|SSF54814|TIGR00231|TIGR00436 BBPR_0826 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PTHR24096|PTHR24096:SF193|SSF56801 BBPR_0827 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007698|IPR007886|IPR008143|IPR016040|IPR023753 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.50.50.60|PF01262|PF05222|PS00837|PTHR10160|PTHR10160:SF19|SM01002|SM01003|SSF51735|SSF52283 BBPR_0828 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PF12769|PTHR10160|PTHR10160:SF19 BBPR_0829 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012136|IPR029035 DHS-like NAD/FAD-binding domain|NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 G3DSA:3.40.50.1220|PF02233|PIRSF000204|PTHR10160|PTHR10160:SF24|SSF52467 BBPR_0830 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR12277|PTHR12277:SF68|SSF53474 BBPR_0831 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001021|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|PTHR33284|SSF50715|TIGR00731 BBPR_0832 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001544|IPR005786 Aminotransferase class IV|Branched-chain amino acid aminotransferase II GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PIRSF006468|PTHR11825|PTHR11825:SF2|SSF56752|TIGR01123 BBPR_0833 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029052 Metallo-dependent phosphatase-like G3DSA:3.60.21.10|SSF56300 BBPR_0834 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300 BBPR_0836 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005115 Uncharacterised domain UPF0126 PF03458|PTHR30506|PTHR30506:SF3 BBPR_0837 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|PD004231|PF01649|PTHR33398|SSF46992|TIGR00029 BBPR_0838 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009000|IPR009022|IPR013842|IPR027417|IPR031157 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|PTHR23115|PTHR23115:SF97|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01393 BBPR_0839 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PTHR13932|PTHR13932:SF5|SM00729|SSF102114|TIGR00539 BBPR_0840 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR004839|IPR010982|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003677|GO:0003824|GO:0009058|GO:0030170|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF01381|PTHR11751|PTHR11751:SF303|SM00530|SSF47413|SSF53383 BBPR_0841 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000640|IPR000795|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2, domain IV|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03764|PF14492|PR00315|PR01037|PTHR23115|PTHR23115:SF91|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231 BBPR_0842 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0008152|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|PTHR11938|PTHR11938:SF1|SSF51395|SSF56235|SSF69336 BBPR_0844 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006005|IPR009051|IPR016040|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase, NADH/NADPH, small subunit 1|NAD(P)-binding domain GO:0006537|GO:0016491|GO:0016639|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|PTHR11938|PTHR11938:SF75|SSF46548|SSF51971|TIGR01317 BBPR_0846 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001296|IPR011875|IPR028098 Glycogen synthase, corynebacterial|Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|PTHR12526:SF355|SSF53756|TIGR02149 BBPR_0847 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF383|SM00382|SSF52540 BBPR_0848 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001110|IPR003010 Carbon-nitrogen hydrolase|Uncharacterised protein family UPF0012, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS01227|PTHR23088|PTHR23088:SF27|SSF56317 BBPR_0849 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00671|SSF81901 BBPR_0850 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003199|IPR029055|IPR029132 Choloylglycine hydrolase/NAAA C-terminal|Choloylglycine hydrolase/Peptidase C59 family|Nucleophile aminohydrolases, N-terminal GO:0016811 G3DSA:3.60.60.10|PF02275|PTHR35527|PTHR35527:SF1|SSF56235 BBPR_0852 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002560|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain PF01610|PF13542|PTHR33498|PTHR33498:SF1 BBPR_0856 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010359|IPR010982 Cro/C1-type helix-turn-helix domain|HTH domain, IrrE-type|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PF06114|PTHR10245|SM00530|SSF47413 BBPR_0858 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 G3DSA:3.40.50.1810 BBPR_0859 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006935|IPR018306|IPR027417 Bacteriophage T5, Orf172 DNA-binding|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF04851|PF10544|SM00974|SSF52540 BBPR_0860 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002052|IPR011639|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Restriction modification methylase Eco57I|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0003824|GO:0006304|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF07669|PS00092|SSF53335 BBPR_0861 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SSF53335 BBPR_0862 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BBPR_0863 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004919 Domain of unknown function DUF262 PF03235|PTHR35149 BBPR_0864 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011089|IPR025364 Domain of unknown function DUF1524|Domain of unknown function DUF4268 PF07510|PF14088|PTHR35149|PTHR35149:SF2 BBPR_0866 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10 BBPR_0868 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|SSF53474 BBPR_0869 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR014816|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 G3DSA:3.10.330.20|G3DSA:3.40.50.150|PF08704|PF14801|PIRSF017269|PTHR12133|PTHR12133:SF1|SSF53335 BBPR_0870 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|SM00855|SSF53254 BBPR_0871 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF14659|PTHR30349|PTHR30349:SF20|SSF56349 BBPR_0879 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR024524 Protein of unknown function DUF3800 PF12686 BBPR_0881 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13443|SSF47413 BBPR_0883 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003497|IPR005039 Antirepressor protein, C-terminal|BRO N-terminal domain GO:0003677 PF02498|PF03374|PTHR36180|PTHR36180:SF2|SM01040 BBPR_0890 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PTHR10302|SSF50249|TIGR00621 BBPR_0891 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:3.90.1530.10|PF02195|PTHR33375|SM00470|SSF110849|TIGR00180 BBPR_0892 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13730|SSF46785 BBPR_0895 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|SSF53098 BBPR_0899 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic G3DSA:3.90.820.10 BBPR_0900 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012933 HicA mRNA interferase family GO:0003729 G3DSA:3.30.920.30|PF07927|SSF54786 BBPR_0901 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR031807 HicB-like antitoxin of toxin-antitoxin system PF15919|SSF143100 BBPR_0906 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003615 HNH nuclease SM00507 BBPR_0907 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR015330 DNA primase/polymerase, bifunctional, N-terminal PF09250 BBPR_0910 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021145 Portal protein, SPP1 Gp6-like PF05133 BBPR_0911 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029501 Bacterial EndoU nuclease PF14436 BBPR_0914 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006444|IPR024455 Phage capsid|Phage major capsid protein, HK97 PF05065|SSF56563|TIGR01554 BBPR_0915 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022741 Bacteriophage B103, Gp8, head fibre PF11133 BBPR_0923 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010090 Phage tail tape measure protein PF10145|TIGR01760 BBPR_0925 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007119|IPR010572 Phage minor structural protein, N-terminal domain|Prophage tail endopeptidase PF06605|TIGR01665 BBPR_0930 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006479 Holin PD008023|PF04688 BBPR_0931 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000064|IPR002477|IPR007921 CHAP domain|Endopeptidase, NLPC/P60 domain|Peptidoglycan binding-like G3DSA:1.10.101.10|G3DSA:3.90.1720.10|PF05257|SSF54001 BBPR_0932 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BBPR_0933 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002629|IPR006276|IPR013215 Cobalamin-independent methionine synthase|Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652|GO:0009086 G3DSA:3.20.20.210|MF_00172|PF01717|PF08267|PIRSF000382|PTHR30519|PTHR30519:SF0|SSF51726|TIGR01371 BBPR_0934 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003171|IPR004620|IPR029041 5,10-methylenetetrahydrofolate reductase|FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114 G3DSA:3.20.20.220|PF02219|PTHR21091|PTHR21091:SF31|SSF51730|TIGR00676 BBPR_0936 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005190|IPR013546 Glutamate-ammonia ligase adenylyltransferase, repeated domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:3.30.460.10|PF03710|PF08335|PTHR30621|SSF81301|SSF81593 BBPR_0937 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF16|SSF53671|TIGR00670 BBPR_0938 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR020542|IPR020545 Aspartate carbamoyltransferase regulatory subunit, C-terminal|Aspartate carbamoyltransferase regulatory subunit, N-terminal G3DSA:2.30.30.20|G3DSA:3.30.70.140|PD006194|PF01948|PF02748|PTHR35805|PTHR35805:SF1|SSF54893|SSF57825 BBPR_0939 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002195|IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Dihydroorotase, conserved site|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0016812|GO:0046872 G3DSA:3.20.20.140|MF_00220_B|PF01979|PS00482|PS00483|PTHR11647|PTHR11647:SF70|SSF51338|SSF51556 BBPR_0940 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001754|IPR011060|IPR011995|IPR013785|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Orotidine 5'-phosphate decarboxylase, type 2|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0006221|GO:0008152 G3DSA:3.20.20.70|MF_01215|PF00215|PS00156|PTHR19278|PTHR19278:SF1|SM00934|SSF51366|TIGR02127 BBPR_0941 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF10418|PIRSF006816|PTHR11938|PTHR11938:SF4|SSF52343|SSF63380 BBPR_0942 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001295|IPR005720|IPR012135|IPR013785|IPR024920 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006221|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00224|PF01180|PIRSF000164|PS00912|PTHR11938|PTHR11938:SF5|SSF51395|TIGR01037 BBPR_0943 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|PTHR19278|PTHR19278:SF36|SSF53271|TIGR00336 BBPR_0944 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF00376|SSF46955 BBPR_0945 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF601|SM00829|SSF50129|SSF51735 BBPR_0947 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR017871|IPR027417 ABC transporter, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.40.50.300|PS00211|PTHR32282|PTHR32282:SF2|SSF52540 BBPR_0948 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 BBPR_0949 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24322|PTHR24322:SF57|SSF51735 BBPR_0950 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003265|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0003906|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00730|PIRSF001435|PTHR10359|PTHR10359:SF17|SM00478|SSF48150 BBPR_0951 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005149|IPR011991 Transcription regulator PadR, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03551|PTHR33169|PTHR33169:SF11|SSF46785 BBPR_0952 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547 BBPR_0953 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR33570|PTHR33570:SF5|SSF51182 BBPR_0954 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|PTHR30124|PTHR30124:SF2|TIGR03071 BBPR_0955 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SSF47413 BBPR_0956 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|PTHR10108:SF890|SSF53335 BBPR_0958 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|PTHR30055:SF91|SSF46689|SSF48498 BBPR_0959 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025328 Domain of unknown function DUF4234 PF14018 BBPR_0960 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF0|SSF46785|SSF53850 BBPR_0961 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|PTHR12725|PTHR12725:SF63|SSF56784|TIGR01509 BBPR_0962 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000631|IPR004443|IPR017953|IPR029056 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Carbohydrate kinase, predicted, conserved site|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PS01050|PTHR12592|PTHR12592:SF0|SSF53613|SSF64153 BBPR_0963 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|PTHR33570|PTHR33570:SF4|SSF69118 BBPR_0964 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR018170|IPR023210 Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PS00062|PTHR11732|SSF51430 BBPR_0965 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR018170|IPR023210 Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PS00798|PTHR11732|SSF51430 BBPR_0966 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025359 Protein of unknown function DUF4263 PF14082 BBPR_0967 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003615 HNH nuclease PF13391 BBPR_0968 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001525|IPR029063|IPR031303 C-5 cytosine methyltransferase|DNA methylase, C-5 cytosine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|G3DSA:3.90.120.10|PF00145|PR00105|PS00095|PTHR10629|PTHR10629:SF32|SSF53335|TIGR00675 BBPR_0970 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002053|IPR013781|IPR017853|IPR018077|IPR018392 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 25|Glycoside hydrolase, family 25 subgroup|LysM domain GO:0003796|GO:0005975|GO:0009253|GO:0016998 G3DSA:3.10.350.10|G3DSA:3.20.20.80|PF01183|PF01476|PTHR34135|PTHR34135:SF2|SM00257|SM00641|SSF51445|SSF54106 BBPR_0975 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|SM00530|SSF47413 BBPR_0976 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002618|IPR016267|IPR029044 Nucleotide-diphospho-sugar transferases|UDPGP family|UTP--glucose-1-phosphate uridylyltransferase GO:0003983|GO:0006011|GO:0008152|GO:0070569 G3DSA:3.90.550.10|PF01704|PIRSF000806|PTHR11952|SSF53448 BBPR_0977 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR026881 WYL domain PF13280 BBPR_0980 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR003593|IPR011545|IPR012961|IPR014001|IPR027417 AAA+ ATPase domain|ATP-dependent RNA helicase Ski2, C-terminal|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF08148|PTHR24031|PTHR24031:SF122|SM00382|SM00487|SM00490|SM01142|SSF52540 BBPR_0981 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 MF_01483|PF13397 BBPR_0982 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023198|IPR023214 HAD-like domain|Phosphoglycolate phosphatase, domain 2 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF23|SSF56784 BBPR_0984 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982|IPR025868 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Putative zinc ribbon domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PF12674|PTHR10245|SM00530|SSF47413 BBPR_0985 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008319|IPR011256|IPR029442 GyrI-like small molecule binding domain|Regulatory factor, effector binding domain|Uncharacterised conserved protein UCP031644 G3DSA:3.20.80.10|PF06445|PIRSF031644|SSF55136 BBPR_0986 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011010|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase/recombinase, N-terminal GO:0003677 G3DSA:1.10.150.130|SSF56349 BBPR_0990 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PTHR30204|PTHR30204:SF3|SM00422|SSF46955 BBPR_0991 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000253|IPR008984|IPR032030 Forkhead-associated (FHA) domain|SMAD/FHA domain|YscD, cytoplasmic domain GO:0005515 G3DSA:2.60.200.20|PF16697|PTHR15715|SM00240|SSF49879 BBPR_0992 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010273 Protein of unknown function DUF881 PF05949|PTHR37313|PTHR37313:SF3 BBPR_0993 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009709 Protein of unknown function DUF1290 PF06947|PIRSF018579 BBPR_0994 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010273 Protein of unknown function DUF881 PF05949|PTHR37313 BBPR_0995 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|PTHR14269 BBPR_0996 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001348|IPR011322|IPR013115|IPR013820|IPR015867|IPR018198|IPR020621 ATP phosphoribosyltransferase HisG|ATP phosphoribosyltransferase HisG, long form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site|Histidine biosynthesis HisG, C-terminal|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 G3DSA:3.30.70.120|G3DSA:3.40.190.10|MF_00079|PF01634|PF08029|PS01316|PTHR21403|PTHR21403:SF0|SSF53850|SSF54913|TIGR00070|TIGR03455 BBPR_0997 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008179|IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004636 MF_01020|PF01503|PTHR21256|SSF101386|TIGR03188 BBPR_0998 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|PTHR11749|SSF51366|TIGR01163 BBPR_0999 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|PTHR30589|PTHR30589:SF0|TIGR00544 BBPR_1000 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002028|IPR011060|IPR013785|IPR018204 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site GO:0003824|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|SSF51366|TIGR00262 BBPR_1001 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001468|IPR001926|IPR006653|IPR006654|IPR011060|IPR013785|IPR013798|IPR023026 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel|Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0003824|GO:0004425|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|G3DSA:3.40.50.1100|MF_00133|MF_00134_A|MF_00134_B|PF00218|PF00291|PS00168|PS00614|PTHR10314|PTHR10314:SF3|SSF51366|SSF53686|TIGR00263 BBPR_1002 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003136|IPR003593|IPR005225|IPR006073|IPR011994|IPR015946|IPR016484|IPR027417|IPR032859 AAA+ ATPase domain|Cytidylate kinase|Cytidylate kinase domain|GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0004127|GO:0005524|GO:0005525|GO:0006139 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|MF_00238|PF01926|PF02224|PF14714|PR00326|PTHR11649|PTHR11649:SF5|SM00382|SSF52540|TIGR00231|TIGR03594 BBPR_1003 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093 BBPR_1004 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000425|IPR022357|IPR023271 Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF00230|PR00783|PS00221|PTHR19139|PTHR19139:SF103|SSF81338 BBPR_1006 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|PTHR11692|PTHR11692:SF2|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 BBPR_1008 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|PTHR11117|PTHR11117:SF2|SM00881|SSF51735|SSF52210|TIGR01019 BBPR_1009 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|PF00549|PF08442|PIRSF001554|PS01217|PTHR11815|PTHR11815:SF1|SSF52210|SSF56059 BBPR_1010 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|PTHR32315|SSF53271|TIGR01090 BBPR_1011 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|PTHR33909|PTHR33909:SF1|SM01323|TIGR00739 BBPR_1012 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|PTHR13779|PTHR13779:SF25|SM00382|SSF46785|SSF52540|TIGR00635 BBPR_1013 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|PTHR33796|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 BBPR_1015 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10 BBPR_1016 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002176|IPR012337 Crossover junction endodeoxyribonuclease RuvC|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PTHR30194|SSF53098 BBPR_1017 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|PTHR12532|SSF75625|TIGR01033 BBPR_1018 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR008979|IPR013781|IPR015882|IPR015883|IPR017853|IPR025705|IPR029018 Beta-hexosaminidase|Beta-hexosaminidase, bacteial type, N-terminal|Chitobiase/beta-hexosaminidase domain 2-like|Coagulation factor 5/8 C-terminal domain|Galactose-binding domain-like|Glycoside hydrolase family 20, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0004553|GO:0004563|GO:0005975 G3DSA:2.60.120.260|G3DSA:3.20.20.80|G3DSA:3.30.379.10|PF00728|PF00754|PF02838|PR00738|PTHR22600|SSF49785|SSF51445|SSF55545 BBPR_1020 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002314|IPR002320|IPR004154|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF03129|PF07973|PR01047|PTHR11451|PTHR11451:SF5|SM00863|SSF52954|SSF55186|SSF55681|TIGR00418 BBPR_1021 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF59|SSF118215 BBPR_1023 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008492|IPR019151 Proteasome assembly chaperone 2|Protein of unknown function DUF774 PF09754|PIRSF028754|PTHR42301|SSF159659 BBPR_1024 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|PTHR30622|PTHR30622:SF4|TIGR00753 BBPR_1025 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011009|IPR016477 Fructosamine/Ketosamine-3-kinase|Protein kinase-like domain G3DSA:3.90.1200.10|PF03881|PIRSF006221|PTHR12149|PTHR12149:SF8|SSF56112 BBPR_1026 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493|SSF57938 BBPR_1027 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002571|IPR011991|IPR013196|IPR021153|IPR023120|IPR029016 GAF domain-like|Heat-inducible transcription repressor HrcA|Heat-inducible transcription repressor HrcA, C-terminal|Helix-turn-helix, type 11|Winged helix-turn-helix DNA-binding domain|Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.390.60|G3DSA:3.30.450.40|MF_00081|PF01628|PF08279|PTHR34824|SSF46785|SSF55781|TIGR00331 BBPR_1028 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR020826|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00802|PTHR11624|PTHR11624:SF1|SM00861|SSF52518|SSF52922|TIGR00232 BBPR_1029 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001585|IPR004732|IPR013785|IPR018225 Aldolase-type TIM barrel|Transaldolase type 2|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004801|GO:0005737|GO:0005975|GO:0006098 G3DSA:3.20.20.70|MF_00493|PF00923|PIRSF036915|PS01054|PTHR10683|PTHR10683:SF12|SSF51569|TIGR00876 BBPR_1030 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912|PTHR37314|PTHR37314:SF1 BBPR_1031 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 G3DSA:1.20.1300.10|PF05525|PTHR30588|PTHR30588:SF0|TIGR00796 BBPR_1033 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 BBPR_1034 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF08282|PTHR10000|PTHR10000:SF8|SSF56784 BBPR_1035 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001236|IPR001557|IPR011304|IPR015955|IPR016040|IPR018177|IPR022383 L-lactate dehydrogenase|L-lactate dehydrogenase, active site|L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|NAD(P)-binding domain GO:0003824|GO:0004459|GO:0005737|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_00488|PF00056|PF02866|PIRSF000102|PR00086|PS00064|PTHR11540|PTHR11540:SF3|SSF51735|SSF56327|TIGR01771 BBPR_1036 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|TIGR00810 BBPR_1037 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|PTHR21139|SSF51351|TIGR00419 BBPR_1038 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001576|IPR015824|IPR015901|IPR015911 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|PTHR11406|SSF53748 BBPR_1039 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003802|IPR018478|IPR023054 Sporulation transcription regulator WhiA, N-terminal domain|Sporulation regulator WhiA|Sporulation regulator WhiA, C-terminal GO:0043937 MF_01420|PF02650|PF10298|PF14527|PTHR37307|TIGR00647 BBPR_1040 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005337|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RapZ-like family GO:0005524 G3DSA:3.40.50.300|MF_00636|PF03668|PIRSF005052|PTHR30448|PTHR30448:SF0|SSF52540 BBPR_1041 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013708|IPR016040 NAD(P)-binding domain|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF08501|PTHR21089|PTHR21089:SF1|SSF51735|SSF53223 BBPR_1042 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000305|IPR001162|IPR001943|IPR003583|IPR004791|IPR010994|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily|Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0003677|GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|PF12826|PTHR30562|PTHR30562:SF1|SM00278|SM00465|SSF46600|SSF47781|SSF82771 BBPR_1043 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|MF_00205|PF00005|PS00211|PTHR32282|PTHR32282:SF2|SSF52540|TIGR00630 BBPR_1044 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic SSF81995 BBPR_1045 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687 BBPR_1046 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF578|SM00448|SM00862|SSF46894|SSF52172 BBPR_1047 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR003660|IPR003661 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0004871|GO:0007165|GO:0016021 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PTHR24423|PTHR24423:SF474|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 BBPR_1048 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003709|IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain|Peptidase M15B GO:0006508|GO:0008233 G3DSA:3.30.1380.10|PF02557|PTHR34385|PTHR34385:SF1|SSF55166 BBPR_1049 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF53|SM00382|SSF52540 BBPR_1050 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005886|IPR008089|IPR016040 NAD(P)-binding domain|Nucleotide sugar epimerase|UDP-glucose 4-epimerase GalE GO:0003978|GO:0005975|GO:0006012|GO:0016857 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PR01713|PTHR10366|PTHR10366:SF39|SSF51735|TIGR01179 BBPR_1051 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000766|IPR005849|IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal|Galactose-1-phosphate uridyl transferase, N-terminal|Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 MF_00571|PF01087|PF02744|PTHR39191|PTHR39191:SF1 BBPR_1052 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|SSF56112 BBPR_1053 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF123|SSF46785|SSF53067 BBPR_1054 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF123|SSF53067 BBPR_1055 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012711|IPR029062 Class I glutamine amidotransferase-like|Lacto-N-biose phosphorylase GO:0016758 PF09508|SSF52317|TIGR02336 BBPR_1056 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR32243|PTHR32243:SF28|SSF161098 BBPR_1057 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF2|SSF161098 BBPR_1058 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|PTHR30061|SSF53850 BBPR_1059 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005256|IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, PabB-like|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0000162|GO:0004049|GO:0009058|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|PTHR11236:SF9|SSF56322|TIGR00564 BBPR_1060 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|PTHR21256|SSF141734 BBPR_1061 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01013|PF00977|PTHR21235|PTHR21235:SF2|SSF51366|TIGR00735 BBPR_1062 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004383|IPR006638|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Elongator protein 3/MiaB/NifB|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|PTHR30544|PTHR30544:SF5|SM00729|SSF102114|TIGR00048 BBPR_1063 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PF01148|PTHR13773|PTHR13773:SF0 BBPR_1064 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|PTHR20982|SSF55194|TIGR00496 BBPR_1065 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|PTHR21499|PTHR21499:SF23|SSF53633|TIGR02075 BBPR_1066 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029058 Alpha/Beta hydrolase fold SSF53474 BBPR_1067 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01127|PTHR11741|SSF46934|SSF54713|TIGR00116 BBPR_1068 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|PTHR12534|SSF52313|TIGR01011 BBPR_1069 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420|TIGR00079 BBPR_1070 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24096|PTHR24096:SF193|SSF56801 BBPR_1072 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001093|IPR005992|IPR013785 Aldolase-type TIM barrel|IMP dehydrogenase-related 2|IMP dehydrogenase/GMP reductase GO:0003824|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00478|PTHR11911|PTHR11911:SF85|SM01240|SSF51412|TIGR01304 BBPR_1073 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004790|IPR019818|IPR024084 Isocitrate dehydrogenase NADP-dependent|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0004450|GO:0006102|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PIRSF000108|PS00470|PTHR11822|SM01329|SSF53659|TIGR00127 BBPR_1074 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BBPR_1075 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24096|PTHR24096:SF193|SSF56801 BBPR_1076 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|PTHR21666:SF190|SSF51261 BBPR_1078 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000905|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PTHR11735|PTHR11735:SF6|SSF53067|TIGR00329|TIGR03723 BBPR_1079 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR006464|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0008080|GO:0016407 G3DSA:3.40.630.30|PF00583|PTHR23091|SSF55729|TIGR01575 BBPR_1080 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 G3DSA:3.30.420.40|PF00814|PTHR11735|SSF53067|TIGR03725 BBPR_1081 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|PTHR33540|SSF52540|TIGR00150 BBPR_1082 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 PTHR34388|SSF48019 BBPR_1083 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004477 ComEC/Rec2-related protein PF03772|PTHR30619|TIGR00360 BBPR_1084 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003583|IPR004509|IPR010994 Competence protein ComEA, helix-hairpin-helix domain|Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like GO:0003677|GO:0006281 G3DSA:1.10.150.320|PF12836|PTHR21180|SM00278|SSF47781|TIGR00426 BBPR_1085 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001412|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR015413|IPR025709 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF08264|PF09334|PF13603|PR00985|PS00178|PTHR11946|PTHR11946:SF7|SSF47323|SSF50677|SSF52374|TIGR00396 BBPR_1086 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|PTHR18966:SF207|SM00062|SSF53850 BBPR_1087 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|PTHR21535|PTHR21535:SF40|SSF143865|SSF144083 BBPR_1088 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|SM00855|SSF53254 BBPR_1089 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001563|IPR029058 Alpha/Beta hydrolase fold|Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 G3DSA:3.40.50.1820|PF00450|SSF53474 BBPR_1090 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.1140.10|G3DSA:3.40.50.300|PF13555|PF13558 BBPR_1091 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025449 Protein of unknown function DUF4194 PF13835 BBPR_1092 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021804 Protein of unknown function DUF3375 PF11855 BBPR_1093 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001719|IPR013022|IPR018246 AP endonuclease 2|AP endonuclease 2, zinc binding site|Xylose isomerase-like, TIM barrel domain GO:0003677|GO:0006281|GO:0008270 G3DSA:3.20.20.150|MF_00152|PF01261|PS00730|PTHR21445|PTHR21445:SF0|SM00518|SSF51658|TIGR00587 BBPR_1094 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007438 Protein of unknown function DUF488 PF04343|PTHR36849|PTHR36849:SF1 BBPR_1095 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|SSF55729 BBPR_1096 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|PTHR23091|SSF55729 BBPR_1098 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PF12535 BBPR_1099 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|SSF56317 BBPR_1101 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR007374|IPR015947|IPR016181 ASCH domain|Acyl-CoA N-acyltransferase|GNAT domain|PUA-like domain GO:0008080 G3DSA:3.10.400.10|G3DSA:3.40.630.30|PF04266|PF13302|PTHR39203|SM01022|SSF55729|SSF88697 BBPR_1103 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|SSF55874 BBPR_1104 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|PTHR13604|SSF143081 BBPR_1106 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR35006|SSF54593 BBPR_1109 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|SSF103473 BBPR_1110 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010290|IPR020846 Major facilitator superfamily domain|Transmembrane secretion effector G3DSA:1.20.1250.20|PF05977|PTHR23513|PTHR23513:SF5|SSF103473 BBPR_1112 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PTHR41778|PTHR41778:SF1 BBPR_1113 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 PF06541 BBPR_1114 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|PTHR10204|SSF52218 BBPR_1115 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006976|IPR010432 RDD|VanZ-like PF04892|PF06271|PTHR36834|PTHR36834:SF1 BBPR_1116 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001867|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00486|SM00862|SSF46894 BBPR_1117 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PTHR40660|SSF50475 BBPR_1118 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009706 Protein of unknown function DUF1287 PD357862|PF06940 BBPR_1119 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000415|IPR029478 Nitroreductase-like|Putative nitroreductase TM1586 GO:0016491 G3DSA:3.40.109.10|G3DSA:3.40.109.30|PF14512|SSF55469 BBPR_1121 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006047|IPR013781|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:3.20.20.80|PF00128|PTHR10357|PTHR10357:SF10|SM00642|SSF51445 BBPR_1122 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005182 Domain of unknown function DUF304 PF03703 BBPR_1123 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|PTHR23029:SF1|SM00855|SSF53254 BBPR_1124 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|PTHR21043|SSF81301|TIGR00090 BBPR_1125 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001451|IPR005882|IPR011004|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PTHR22572|PTHR22572:SF115|SSF51161|SSF53448|TIGR01173 BBPR_1126 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|PTHR10210|PTHR10210:SF41|SM01400|SSF53271|TIGR01251 BBPR_1127 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|PTHR12039|SSF52374|TIGR00125|TIGR00482 BBPR_1129 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PTHR11063|PTHR11063:SF8|SSF53720|TIGR00407 BBPR_1130 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001926|IPR004450|IPR029144 Threonine synthase, N-terminal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|G3DSA:3.90.1380.10|PF00291|PF14821|PTHR10314|PTHR10314:SF1|SSF53686|TIGR00260 BBPR_1131 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025699 ABC-2 membrane transporter-like PF13346 BBPR_1132 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025699 ABC-2 membrane transporter-like PF13346 BBPR_1133 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF499|SM00382|SSF52540 BBPR_1134 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000524|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PTHR38445|PTHR38445:SF2|SM00345|SSF46785 BBPR_1135 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|PTHR18901|PTHR18901:SF44|SSF56784|TIGR01509 BBPR_1136 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003395|IPR003593|IPR004604|IPR027417 AAA+ ATPase domain|DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|PTHR11059|SM00382|SSF52540|TIGR00634 BBPR_1137 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|PTHR20275|SSF111331 BBPR_1138 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PF02386|PTHR32024|PTHR32024:SF1 BBPR_1139 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003148|IPR006037|IPR016040 NAD(P)-binding domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0006813|GO:0008324 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02080|PF02254|PTHR16254|SSF116726|SSF51735 BBPR_1141 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002877|IPR002942|IPR004538|IPR029063 Haemolysin A /rRNA methyltransferase TlyA|RNA-binding S4 domain|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003723|GO:0008168|GO:0032259 G3DSA:3.10.290.10|G3DSA:3.40.50.150|PF01479|PF01728|PIRSF005578|PTHR32319|PTHR32319:SF0|SM00363|SSF53335|SSF55174|TIGR00478 BBPR_1143 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006357|IPR023214|IPR023215 HAD-like domain|HAD-superfamily hydrolase, subfamily IIA|Nitrophenylphosphatase-like domain G3DSA:3.40.50.1000|G3DSA:3.40.50.10410|PF13242|PF13344|PTHR19288|PTHR19288:SF3|SSF56784|TIGR01460 BBPR_1144 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BBPR_1145 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024088|IPR024107 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type|Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02006|PF00579|PF01479|PR01040|PS00178|PTHR11766|PTHR11766:SF0|SM00363|SSF52374|SSF55174|TIGR00234 BBPR_1146 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 PF06541 BBPR_1147 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604 BBPR_1148 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF3|SSF48557|TIGR00838 BBPR_1149 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR022625|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal|Type-1 restriction enzyme R protein, C-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PF12008|PTHR30195|PTHR30195:SF16|SM00487|SSF52540|TIGR00348 BBPR_1150 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007421|IPR011991|IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain|Schlafen, AAA domain|Winged helix-turn-helix DNA-binding domain GO:0005524 G3DSA:1.10.10.10|PF04326|PF13749|SSF46785 BBPR_1151 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|SSF116734 BBPR_1152 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002052|IPR003356|IPR004546|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|Restriction endonuclease, type I, HsdM|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0009007|GO:0009307|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30408|PTHR30408:SF4|SSF53335|TIGR00497 BBPR_1153 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025579 Domain of unknown function DUF4357 PF14267 BBPR_1154 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 BBPR_1155 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001518|IPR014729|IPR018223|IPR023434|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 1 subfamily|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526 G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00005|PF00764|PS00564|PS00565|PTHR11587|PTHR11587:SF2|SSF52402|SSF69864|TIGR00032 BBPR_1156 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001669|IPR011991|IPR020899|IPR020900|IPR024946 Arginine repressor|Arginine repressor C-terminal-like domain|Arginine repressor, C-terminal|Arginine repressor, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0006525|GO:0034618|GO:0051259 G3DSA:1.10.10.10|G3DSA:3.30.1360.40|MF_00173|PD007402|PF01316|PF02863|PR01467|PTHR34471|PTHR34471:SF1|SSF46785|SSF55252|TIGR01529 BBPR_1157 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|PTHR11405|PTHR11405:SF1|SSF53671|TIGR00658 BBPR_1158 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF79|SSF53383|TIGR00707 BBPR_1159 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001048|IPR001057|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526|GO:0006561 G3DSA:3.40.1160.10|MF_00082_B|PF00696|PIRSF000728|PR00474|PTHR23342|SSF53633|TIGR00761 BBPR_1160 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|PTHR23100|PTHR23100:SF0|SSF56266|TIGR00120 BBPR_1161 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000534|IPR000706|IPR012280|IPR016040|IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|PTHR32338|PTHR32338:SF8|SM00859|SSF51735|SSF55347|TIGR01850 BBPR_1163 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|PTHR10947|PTHR10947:SF0|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 BBPR_1164 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|PTHR11538|SSF46589|SSF55681|TIGR00468 BBPR_1165 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001537|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PTHR12029|PTHR12029:SF61|SSF55315|SSF75217 BBPR_1166 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 BBPR_1167 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005226 UPF0014 family PF03649|PTHR30028|PTHR30028:SF0|TIGR00245 BBPR_1170 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 G3DSA:2.60.120.280|PF02311|SSF51215 BBPR_1171 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PTHR11119|PTHR11119:SF49|TIGR00801 BBPR_1172 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001345|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 G3DSA:3.40.50.1240|PF00300|PS00175|PTHR23029|PTHR23029:SF26|SM00855|SSF53254 BBPR_1173 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|SSF53474 BBPR_1174 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PF03601|PTHR30106|PTHR30106:SF2 BBPR_1175 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF11|SSF46785|SSF53850 BBPR_1176 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023214 HAD-like domain PF12710|SSF56784 BBPR_1177 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001173|IPR007710|IPR029044 Glycosyltransferase 2-like|Nucleoside 2-deoxyribosyltransferase|Nucleotide-diphospho-sugar transferases GO:0009159|GO:0050144|GO:0070694 G3DSA:3.40.50.1810|G3DSA:3.90.550.10|PF00535|PF05014|PTHR22916|PTHR22916:SF24|SSF52309|SSF53448 BBPR_1180 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005543|IPR026870 PASTA domain|Zinc-ribbon domain PF03793|PF13240 BBPR_1181 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|PTHR10655|PTHR10655:SF17|SSF53474 BBPR_1182 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420 BBPR_1184 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon PF09855 BBPR_1185 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010428|IPR024079 Metallopeptidase, catalytic domain|Zinicin-like metallopeptidase GO:0008237 G3DSA:3.40.390.10|PF06262|PTHR41522|SSF55486 BBPR_1187 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018649 SHOCT domain PF09851|PF13421 BBPR_1189 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BBPR_1190 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000719|IPR008266|IPR011009 Protein kinase domain|Protein kinase-like domain|Tyrosine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00109|PTHR24362|SSF56112 BBPR_1191 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PTHR37694|SSF51182 BBPR_1192 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|PTHR10108:SF705|SSF53335 BBPR_1193 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005185|IPR031308 Inner membrane component domain|Uncharacterised conserved protein UCP028777 PF03733|PIRSF028777|PTHR31503|PTHR31503:SF17 BBPR_1194 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BBPR_1195 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|PF02661|PTHR13504|PTHR13504:SF31|SSF140931 BBPR_1196 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|PTHR23305|PTHR23305:SF12|SSF52540|SSF81271|TIGR00092 BBPR_1197 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF354|SSF53383 BBPR_1198 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30450|PTHR30450:SF1|SSF161098 BBPR_1199 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR018449|IPR026253|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Methionine import ATP-binding protein MetN|NIL domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015821|GO:0016887|GO:0042626 G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00005|PF09383|PS00211|PTHR24220|PTHR24220:SF186|SM00382|SM00930|SSF52540|SSF55021 BBPR_1200 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005475|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|PTHR11624|PTHR11624:SF78|SM00861|SSF52518|SSF52922 BBPR_1201 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001017|IPR029061 Dehydrogenase, E1 component|Thiamin diphosphate-binding fold GO:0008152|GO:0016624 G3DSA:3.40.50.970|PF00676|PTHR11516|PTHR11516:SF25|SSF52518 BBPR_1202 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|PTHR30429|SSF53850 BBPR_1204 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000246|IPR029055 Nucleophile aminohydrolases, N-terminal|Peptidase T2, asparaginase 2 GO:0016787 PF01112|PTHR10188|SSF56235 BBPR_1205 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PTHR11645|PTHR11645:SF0|SSF48179|SSF51735|TIGR00112 BBPR_1206 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000073|IPR002410|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33 GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PR00793|PTHR10992|PTHR10992:SF749|SSF53474 BBPR_1207 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF07730|PTHR24421|PTHR24421:SF26|SSF55874 BBPR_1209 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF564|SM00421|SM00448|SSF46894|SSF52172 BBPR_1210 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000326|IPR001011 Acid phosphatase, class A, bacterial|Phosphatidic acid phosphatase type 2/haloperoxidase GO:0003993|GO:0030288 G3DSA:1.20.144.10|PF01569|PR00483|SM00014|SSF48317 BBPR_1211 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489|PTHR30489:SF9 BBPR_1212 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF484|SM00382|SSF52540 BBPR_1213 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF12|SSF53383|TIGR01326 BBPR_1214 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 PF06541 BBPR_1216 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004625|IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Pyridoxine kinase|Ribokinase-like GO:0008478|GO:0009443 G3DSA:3.40.1190.20|PF08543|PTHR10534|PTHR10534:SF0|SSF53613 BBPR_1217 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003952|IPR003953|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00368|PS00504|PTHR11632|PTHR11632:SF5|SSF46977|SSF51905|SSF56425 BBPR_1218 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001497|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PS00374|PTHR10815|SSF46767|TIGR00589 BBPR_1219 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003488 DNA recombination-mediator protein A GO:0009294 G3DSA:3.40.50.450|PF02481|PTHR32039|PTHR32039:SF8|SSF102405 BBPR_1220 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000523|IPR001208|IPR003593|IPR004482|IPR014721|IPR020568|IPR025158|IPR027417 AAA+ ATPase domain|MCM domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003677|GO:0005524|GO:0006260 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|PR01657|PTHR32039|PTHR32039:SF7|SM00382|SSF52540|SSF54211|TIGR00368 BBPR_1221 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|PTHR34039|PTHR34039:SF1|SSF52980|TIGR00252 BBPR_1222 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001041|IPR004489|IPR009051|IPR012675|IPR017896|IPR017900|IPR025192 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13183|PS00198|PTHR11921|PTHR11921:SF15|SSF46548|SSF54292|TIGR00384 BBPR_1223 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002935|IPR029063 O-methyltransferase, family 3|S-adenosyl-L-methionine-dependent methyltransferase GO:0008171 G3DSA:3.40.50.150|PF01596|PTHR10509|PTHR10509:SF18|SSF53335 BBPR_1224 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF1|SSF102405|TIGR00730 BBPR_1225 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004670|IPR023171 Na+/H+ antiporter NhaA|Na/H antiporter domain GO:0006814|GO:0006885|GO:0016021 G3DSA:1.20.1530.10|MF_01844|PF06965|PTHR30341|PTHR30341:SF0 BBPR_1226 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004839|IPR015421|IPR015422|IPR015424|IPR027619 Aminotransferase, class I/classII|Putative C-S lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF422|SSF53383|TIGR04350 BBPR_1227 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|PTHR11262|PTHR11262:SF4|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 BBPR_1228 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001907|IPR018215|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, Ser active site|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|PS00382|PTHR10381|PTHR10381:SF7|SSF52096 BBPR_1229 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001907|IPR023562|IPR029045 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PTHR10381|PTHR10381:SF22|SSF52096 BBPR_1230 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|PTHR11689|PTHR11689:SF14|SSF81340 BBPR_1231 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001179|IPR005215|IPR008880|IPR008881|IPR027304 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|PTHR30560|SSF102735|SSF109998|SSF54534|TIGR00115 BBPR_1232 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002121|IPR002562|IPR010997|IPR012337 3'-5' exonuclease domain|HRDC domain|HRDC-like|Ribonuclease H-like domain GO:0000166|GO:0003676|GO:0003824|GO:0005622|GO:0006139|GO:0008408|GO:0044237 G3DSA:3.30.420.10|PF00570|PF01612|PTHR12124|PTHR12124:SF42|SM00474|SSF47819|SSF53098 BBPR_1233 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021555 Protein of unknown function DUF3000 PF11452 BBPR_1234 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001989|IPR007197|IPR012838 Pyruvate formate-lyase activating enzyme|Radical SAM|Radical-activating enzyme, conserved site GO:0003824|GO:0016491|GO:0043365|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.80.30.10|PF04055|PF13353|PS01087|PTHR30352|PTHR30352:SF9|SSF102114|TIGR02493 BBPR_1235 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001150|IPR004184|IPR005949|IPR019777 Formate C-acetyltransferase glycine radical, conserved site|Formate acetyltransferase|Glycine radical domain|Pyruvate formate lyase domain GO:0003824|GO:0005737|GO:0005975|GO:0008152|GO:0008861 G3DSA:3.20.70.20|PF01228|PF02901|PIRSF000379|PS00850|PTHR30191|PTHR30191:SF0|SSF51998|TIGR01255 BBPR_1237 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000132|IPR003010|IPR003694|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Nitrilase/cyanide hydratase, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|PS00920|PTHR23090|SSF52402|SSF56317|TIGR00552 BBPR_1238 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 BBPR_1240 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000150|IPR006379|IPR023214 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.40.50.1000|PF08282|PS01229|PTHR10000|PTHR10000:SF1|SSF56784|TIGR00099|TIGR01484 BBPR_1241 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|PTHR11071|SSF50891 BBPR_1242 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007337 RelB antitoxin/Antitoxin DinJ PF04221 BBPR_1243 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011067 Plasmid maintenance toxin/Cell growth inhibitor G3DSA:2.30.30.110|SSF50118 BBPR_1244 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009003|IPR018114 Peptidase S1, PA clan|Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 G3DSA:2.40.10.10|PS00134|SSF50494 BBPR_1247 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF0|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 BBPR_1248 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008180|IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0004170|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|PTHR11241|PTHR11241:SF0|SSF51283|TIGR00576 BBPR_1249 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025242 Protein of unknown function DUF4193 PF13834 BBPR_1250 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021421 Protein of unknown function DUF3071 PF11268 BBPR_1251 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002591|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824|GO:0008152 G3DSA:3.40.720.10|PF01663|SSF53649 BBPR_1252 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002205|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|PF00521|PF03989|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719 BBPR_1253 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR011545|IPR013701|IPR014001|IPR027417 DEAD/DEAH box helicase domain|DEAD/H associated|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524|GO:0016818 G3DSA:3.40.50.300|PF00270|PF00271|PF08494|PTHR24031|PTHR24031:SF122|SM00487|SM00490|SSF52540 BBPR_1254 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13443|PTHR37301 BBPR_1257 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000362|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0006099|GO:0016829 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00149|PS00163|PTHR11444|PTHR11444:SF25|SSF48557 BBPR_1258 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|PTHR10169:SF20|SM00387|SM00433|SSF54211|SSF55874|SSF56719 BBPR_1259 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02393|TIGR02937 BBPR_1260 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025447 Protein of unknown function DUF4192 PF13830 BBPR_1261 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF45|SSF48576 BBPR_1262 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000719|IPR005543|IPR008271|IPR011009 PASTA domain|Protein kinase domain|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PF03793|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SM00740|SSF54184|SSF56112 BBPR_1263 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|PTHR10434:SF21|SM00563|SSF69593 BBPR_1265 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000312|IPR005940|IPR017459 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|PTHR11922|PTHR11922:SF5|SSF47648|SSF52418|TIGR01245 BBPR_1266 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|PTHR30612|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 BBPR_1267 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003489|IPR032528 Ribosomal protein S30Ae/sigma 54 modulation protein|Sigma 54 modulation/S30EA ribosomal protein, C-terminal GO:0044238 G3DSA:3.30.160.100|PF02482|PF16321|PTHR33231|SSF69754|TIGR00741 BBPR_1269 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003783|IPR011991 Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain GO:0006282 G3DSA:1.10.10.10|PF02631|PTHR33602 BBPR_1270 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|PTHR22942|PTHR22942:SF1|SM00382|SSF52540|SSF54752|TIGR02012 BBPR_1271 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021408 Protein of unknown function DUF3046 PF11248 BBPR_1272 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 BBPR_1273 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|PTHR13939|PTHR13939:SF0|SSF142433|TIGR00199 BBPR_1274 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|PTHR14269|TIGR00560 BBPR_1275 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002543|IPR011991|IPR018541|IPR025199|IPR027417 DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PF13491|PTHR22683|PTHR22683:SF41|SM00843|SSF46785|SSF52540 BBPR_1276 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|PF02661|PTHR39560|PTHR39560:SF1|SSF140931 BBPR_1277 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|SSF52540|TIGR00174 BBPR_1278 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01864|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF43|SM00729|SSF102114|TIGR00089|TIGR01574 BBPR_1279 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007685 RelA/SpoT GO:0015969 G3DSA:1.10.287.860|G3DSA:3.30.460.10|PF04607|PTHR21262|SM00954|SSF81301 BBPR_1280 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF8|SSF103481 BBPR_1281 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006214 Bax inhibitor 1-related PF01027|PTHR23291|PTHR23291:SF42 BBPR_1282 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR031989 Domain of unknown function DUF5067 PF16729 BBPR_1283 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR027417 Histidine kinase-like ATPase, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PTHR24421|PTHR24421:SF26|SSF55874 BBPR_1284 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR013249 CheY-like superfamily|RNA polymerase sigma factor 70, region 4 type 2|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF08281|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF52172 BBPR_1285 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004919 Domain of unknown function DUF262 PF03235|PTHR35149|PTHR35149:SF2 BBPR_1286 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001754|IPR008145|IPR011060|IPR011995|IPR013785|IPR017665|IPR020590|IPR027417 Aldolase-type TIM barrel|Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, type 2|P-loop containing nucleoside triphosphate hydrolase|Ribulose-phosphate binding barrel GO:0003824|GO:0004385|GO:0004590|GO:0006163|GO:0006207|GO:0006221|GO:0008152 G3DSA:3.20.20.70|G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00215|PF00625|PS00856|PTHR23117|SM00072|SM00934|SSF51366|SSF52540|TIGR02127|TIGR03263 BBPR_1287 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|PTHR11405|PTHR11405:SF5|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 BBPR_1288 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|PTHR11405|SM01097|SSF52021|SSF52317|TIGR01368 BBPR_1289 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|PTHR11078|SSF48013|TIGR01951 BBPR_1290 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 BBPR_1291 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23513|SSF103473 BBPR_1292 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027372 Phytase-like domain PF13449|PTHR41519|PTHR41519:SF1 BBPR_1293 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027372 Phytase-like domain PF13449 BBPR_1294 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF112|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 BBPR_1295 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 BBPR_1296 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|PTHR11205|SSF47973|TIGR01029 BBPR_1297 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacteria|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|PTHR11652|SSF50249|TIGR00981 BBPR_1298 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001597|IPR015421|IPR015422|IPR015424 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PTHR10289|PTHR10289:SF8|SSF53383 BBPR_1299 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|PTHR12526:SF397|SSF53756 BBPR_1300 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003343|IPR006626|IPR008964|IPR008979|IPR011050|IPR012334|IPR013222|IPR025883 Bacterial Ig-like, group 2|Cadherin-like beta sandwich domain|Galactose-binding domain-like|Glycosyl hydrolase family 98, putative carbohydrate-binding module|Invasin/intimin cell-adhesion fragments|Parallel beta-helix repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|G3DSA:2.60.40.1080|PF02368|PF08305|PF12733|PF13229|SM00710|SM00776|SSF49373|SSF49785|SSF51126 BBPR_1301 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003135|IPR005862|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide formyltransferase 2|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0000287|GO:0003824|GO:0004644|GO:0005524|GO:0009152|GO:0016742 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01643|PF02222|PTHR11609|PTHR11609:SF7|SSF51246|SSF52440|SSF56059 BBPR_1302 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001636|IPR013816|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PTHR11609|PTHR11609:SF2|SSF56104|TIGR00081 BBPR_1303 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010141|IPR010918|IPR016188|IPR029062 AIR synthase-related protein, C-terminal domain|Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase, FGAM|PurM-like, N-terminal domain G3DSA:3.30.1330.10|G3DSA:3.40.50.880|PF02769|PF13507|PTHR10099|SM01211|SSF52317|SSF55326|SSF56042|TIGR01857 BBPR_1305 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025324 Protein of unknown function DUF4230 PF14014 BBPR_1306 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005122|IPR026353 Hypoxanthine-DNA glycosylase|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SM00986|SM00987|SSF52141|TIGR04274 BBPR_1307 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic G3DSA:3.40.190.10|SSF53850 BBPR_1308 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR35006|SSF54593 BBPR_1310 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001126|IPR017961 DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.70.270|PF00817|PF11799|PTHR11076|PTHR11076:SF31|SSF56672 BBPR_1311 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000836|IPR005854|IPR017932|IPR029055|IPR029057 Amidophosphoribosyltransferase|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13537|PIRSF000485|PTHR11907|PTHR11907:SF0|SSF53271|SSF56235|TIGR01134 BBPR_1312 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|PTHR10520|SSF55326|SSF56042|TIGR00878 BBPR_1313 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020559|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Phosphoribosylglycinamide synthetase, conserved site|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PS00184|PTHR10520|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 BBPR_1314 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PF00884 BBPR_1315 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000801|IPR029058 Alpha/Beta hydrolase fold|Putative esterase G3DSA:3.40.50.1820|PF00756|PTHR10907|PTHR10907:SF33|SSF53474 BBPR_1316 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal PF09924|PTHR34697 BBPR_1318 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PTHR30477|PTHR30477:SF1|SSF53807 BBPR_1320 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001383|IPR001705|IPR011332|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24|Ribosomal protein L33|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00471|PF00830|PTHR13528|SSF143800|SSF57829|TIGR00009|TIGR01023 BBPR_1321 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001209|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|PTHR19836|PTHR19836:SF21|SSF57716 BBPR_1322 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PF01197|PS01143|PTHR33280|PTHR33280:SF2|SSF143800|TIGR00105 BBPR_1323 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PF00444|SSF57840 BBPR_1324 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|SSF57829|TIGR01031 BBPR_1325 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005524 Predicted permease DUF318 PF03773|PTHR34184|PTHR34184:SF1 BBPR_1326 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR015402 Protein of unknown function DUF1980 TIGR03943 BBPR_1328 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|PTHR33202:SF5|SSF46785 BBPR_1329 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|PTHR11609|PTHR11609:SF5|SSF51246|SSF52440|SSF56059|TIGR01161 BBPR_1330 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000031|IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE|Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189|GO:0034023 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|PTHR23046|PTHR23046:SF2|SM01001|SSF52255|TIGR01162 BBPR_1331 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF605|SM00829|SSF50129|SSF51735 BBPR_1332 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005475|IPR005477|IPR009014|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|PF13292|PTHR11624|PTHR11624:SF62|SM00861|SSF52518|SSF52922 BBPR_1333 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002737 MEMO1 family PF01875|PTHR11060|PTHR11060:SF0|TIGR04336 BBPR_1334 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000835|IPR011991|IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain|MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13463|PF13749|PTHR30595|PTHR30595:SF6|SSF46785 BBPR_1335 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|PTHR30514|PTHR30514:SF1|SSF46689|SSF53697 BBPR_1336 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR019475|IPR030846 DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF10410|PF13662|PIRSF002811|PTHR30313|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 BBPR_1337 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003607|IPR006261|IPR006674|IPR023293|IPR026875 Deoxyguanosinetriphosphate triphosphohydrolase|Deoxyguanosinetriphosphate triphosphohydrolase, central domain|HD domain|HD/PDEase domain|Phosphohydrolase-associated domain GO:0000287|GO:0008832|GO:0046039 G3DSA:1.10.3210.10|G3DSA:1.10.3410.10|PF01966|PF13286|PTHR11373|PTHR11373:SF25|SM00471|SSF109604|TIGR01353 BBPR_1338 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|PTHR30511|PTHR30511:SF0|SM01005|SSF50621|SSF51419|TIGR00492 BBPR_1339 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PF13520|PIRSF006060|PTHR11785|PTHR11785:SF405 BBPR_1340 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 BBPR_1341 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003815|IPR011249 Metalloenzyme, LuxS/M16 peptidase-like|S-ribosylhomocysteinase (LuxS) GO:0003824|GO:0005506|GO:0009372|GO:0043768|GO:0046872 G3DSA:3.30.1360.80|MF_00091|PD013172|PF02664|PIRSF006160|PR01487|PTHR35799|SSF63411 BBPR_1342 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR002121|IPR004589|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|HRDC domain|HRDC-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|PTHR13710|PTHR13710:SF81|SM00341|SM00487|SM00490|SM00956|SSF46785|SSF47819|SSF52540|TIGR00614 BBPR_1343 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000277|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PTHR11808|PTHR11808:SF57|SSF53383 BBPR_1344 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|PTHR10314|PTHR10314:SF104|SSF53686 BBPR_1346 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PTHR10996|SSF51735|SSF52283 BBPR_1347 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 BBPR_1348 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF574|SM00382|SSF52540 BBPR_1349 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF10|SSF161098 BBPR_1350 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BBPR_1351 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|SSF53850 BBPR_1352 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|MF_01274|PF03309|PTHR34265|SSF53067|TIGR00671 BBPR_1353 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|PTHR30061|PTHR30061:SF25|SSF53850 BBPR_1354 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic G3DSA:3.40.190.10 BBPR_1355 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003476|IPR013529|IPR013738|IPR013739|IPR013781|IPR017853|IPR029062 Beta-galactosidase C-terminal|Beta-galactosidase trimerisation|Class I glutamine amidotransferase-like|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 42|Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0006012|GO:0009341 G3DSA:3.20.20.80|G3DSA:3.40.50.880|PF02449|PF08532|PF08533|PIRSF001084|PTHR36447|PTHR36447:SF1|SSF51445|SSF52317 BBPR_1356 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PTHR32243|PTHR32243:SF28|SSF161098 BBPR_1358 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|PTHR30146:SF34|SM00354|SSF47413|SSF53822 BBPR_1359 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|SSF51735 BBPR_1360 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR000933|IPR008979|IPR013781|IPR017853 Coagulation factor 5/8 C-terminal domain|Galactose-binding domain-like|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 29 GO:0004560|GO:0005975 G3DSA:2.60.120.260|G3DSA:3.20.20.80|PF00754|PF01120|PTHR10030|PTHR10030:SF28|SM00812|SSF49785|SSF51445 BBPR_1362 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR013155|IPR014729|IPR023586 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 2|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02003|PF00133|PF08264|PR00984|PS00178|PTHR11946|PTHR11946:SF87|SSF47323|SSF50677|SSF52374|TIGR00392 BBPR_1363 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV PF04020|PTHR37309|PTHR37309:SF1 BBPR_1364 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012394|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase NAD(P)-dependent|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0004030|GO:0006081|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PIRSF036492|PS00070|PS00687|PTHR11699|PTHR11699:SF15|SSF53720 BBPR_1365 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001107|IPR001972 Band 7 domain|Stomatin family GO:0016020 PF01145|PTHR10264|PTHR10264:SF84|SM00244|SSF117892 BBPR_1366 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PTHR11808|PTHR11808:SF12|SSF53383 BBPR_1367 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000277|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|SSF53383 BBPR_1368 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF147|SSF51905|SSF55424 BBPR_1369 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004381|IPR018193 Glycerate kinase|Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 G3DSA:3.90.1510.10|PF02595|PTHR21599|SSF110738|TIGR00045 BBPR_1370 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR003838|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter permease protein domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02687|PS00211|PTHR24220|PTHR24220:SF539|SM00382|SSF52540 BBPR_1371 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00702|PR00119|PR00121|PS00154|PTHR24093|PTHR24093:SF298|SSF56784|SSF81653|SSF81665|TIGR01494 BBPR_1372 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR10908|SSF55729 BBPR_1373 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF82|SSF103473 BBPR_1374 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|PTHR11732:SF191|SSF51430 BBPR_1375 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006054|IPR012337|IPR013520 DNA polymerase III, epsilon subunit|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.30.420.10|PF00929|PTHR30231|SM00479|SSF53098|TIGR00573 BBPR_1376 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002020|IPR016142|IPR016143|IPR024176 Citrate synthase|Citrate synthase, bacterial-type|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PTHR11739|SSF48256 BBPR_1377 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PTHR10804|PTHR10804:SF41|SSF55920|TIGR00500 BBPR_1378 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 BBPR_1379 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000718|IPR008753|IPR018497|IPR024079 Metallopeptidase, catalytic domain|Peptidase M13|Peptidase M13, C-terminal domain|Peptidase M13, N-terminal domain GO:0004222|GO:0006508|GO:0008237 G3DSA:3.40.390.10|PF01431|PF05649|PR00786|PTHR11733|PTHR11733:SF65|SSF55486 BBPR_1380 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000424|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding GO:0003697 G3DSA:2.40.50.140|PF00436|SSF50249 BBPR_1382 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PR01046|PTHR11451|PTHR11451:SF3|SSF52954|SSF55681|SSF55826|TIGR00409 BBPR_1386 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR003840|IPR010285|IPR027417 AAA+ ATPase domain|DNA helicase|DNA helicase Pif1-like|P-loop containing nucleoside triphosphate hydrolase GO:0000723|GO:0003678|GO:0004386|GO:0005524|GO:0006281 G3DSA:3.40.50.300|PF05970|PTHR23274|SM00382|SSF52540 BBPR_1387 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000150|IPR023214 Cof protein|HAD-like domain GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PTHR10000|PTHR10000:SF27|SSF56784|TIGR00099 BBPR_1388 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012337|IPR013520|IPR022894 Exonuclease, RNase T/DNA polymerase III|Oligoribonuclease|Ribonuclease H-like domain GO:0003676|GO:0016788 G3DSA:3.30.420.10|MF_00045|PF00929|PTHR11046|PTHR11046:SF5|SM00479|SSF53098 BBPR_1389 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001789|IPR001867|IPR003594|IPR004358|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|OmpR/PhoB-type DNA-binding domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355|GO:0016310|GO:0016772 G3DSA:1.10.10.10|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00486|PF02518|PR00344|PTHR26402|PTHR26402:SF316|SM00387|SM00862|SSF46894|SSF52172|SSF55874 BBPR_1390 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006047|IPR013781|IPR015902|IPR017853|IPR022567 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, C-terminal (DUF3459)|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PF11941|PTHR10357|PTHR10357:SF11|SM00642|SSF51445 BBPR_1391 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|PTHR11911|PTHR11911:SF6|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 BBPR_1392 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 PF00953|PTHR22926|PTHR22926:SF3 BBPR_1393 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|PTHR17490|SSF55821|TIGR00057 BBPR_1394 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|PTHR23416|PTHR23416:SF60|SSF51161 BBPR_1395 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002052|IPR004556|IPR019874|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|PF03602|PS00092|PTHR18895|PTHR18895:SF64|SSF53335|TIGR00536|TIGR03534 BBPR_1396 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PTHR11075|PTHR11075:SF9|SM00937|SSF75620|TIGR00019 BBPR_1397 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002150|IPR027491 Ribosomal protein L31|Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00501|PF01197|PR01249|PS01143|PTHR33280|PTHR33280:SF2|SSF143800|TIGR00105 BBPR_1398 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009057|IPR018060|IPR018062|IPR029062 Class I glutamine amidotransferase-like|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF12833|PS00041|PTHR11019|PTHR11019:SF68|SM00342|SSF46689|SSF52317 BBPR_1399 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 PF06800|PTHR16119|PTHR16119:SF19|SSF103481 BBPR_1400 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|PTHR22604:SF103|SSF51735|SSF55347 BBPR_1401 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003333|IPR029063 Mycolic acid cyclopropane synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008610 G3DSA:3.40.50.150|PF02353|PIRSF003085|PTHR10108|PTHR10108:SF743|SSF53335 BBPR_1403 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008183|IPR011013|IPR014718|IPR025532 Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain|Glucose-6-phosphate 1-epimerase|Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0016853|GO:0030246 G3DSA:2.70.98.10|PF01263|PIRSF016020|PTHR11122|SSF74650 BBPR_1404 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012338 Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF13354|SSF56601 BBPR_1405 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001650|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PTHR24031|PTHR24031:SF334|SM00487|SM00490|SSF52540 BBPR_1406 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|SSF103481 BBPR_1408 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489 BBPR_1409 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF10 BBPR_1410 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR024499|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF2974 G3DSA:3.40.50.1820|PF11187|SSF53474 BBPR_1411 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF37|SSF53383|TIGR01326 BBPR_1412 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|SSF51430 BBPR_1413 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic PTHR23501|PTHR23501:SF64 BBPR_1415 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46785 BBPR_1416 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000600|IPR004654 Glucokinase ROK|ROK family GO:0004340|GO:0005737|GO:0006096|GO:0051156 G3DSA:3.30.420.40|PF00480|PS01125|PTHR18964|PTHR18964:SF123|SSF53067|TIGR00744 BBPR_1417 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR19211|PTHR19211:SF6|SM00382|SSF52540 BBPR_1418 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|PTHR23501|PTHR23501:SF63|SSF103473 BBPR_1419 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001375|IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008152|GO:0008236|GO:0016787 G3DSA:3.40.50.1820|PF00326|PF07859|PTHR23024|PTHR23024:SF41|SSF53474 BBPR_1420 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012349|IPR024747 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-related GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF12900|PTHR34071|SSF50475 BBPR_1421 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698|PTHR30336|PTHR30336:SF2 BBPR_1423 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009323 Protein of unknown function DUF979 PF06166 BBPR_1424 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000816|IPR016125|IPR029762 Peptidase C15, pyroglutamyl peptidase I|Peptidase C15, pyroglutamyl peptidase I-like|Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 G3DSA:3.40.630.20|MF_00417|PF01470|PIRSF015592|PR00706|PS01333|PS01334|PTHR23402|PTHR23402:SF1|SSF53182|TIGR00504 BBPR_1428 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR024269 Protein of unknown function DUF3791 PF12668 BBPR_1429 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025051 Protein of unknown function DUF3990 PF13151 BBPR_1431 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|PF02661|PTHR39560|PTHR39560:SF1|SSF140931 BBPR_1435 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SSF52172 BBPR_1436 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BBPR_1437 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF7|SM00382|SSF52540|TIGR03719 BBPR_1438 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR000772|IPR003343|IPR008964|IPR008979|IPR013781|IPR015882|IPR015883|IPR017853|IPR025705|IPR029018 Bacterial Ig-like, group 2|Beta-hexosaminidase|Beta-hexosaminidase, bacteial type, N-terminal|Chitobiase/beta-hexosaminidase domain 2-like|Coagulation factor 5/8 C-terminal domain|Galactose-binding domain-like|Glycoside hydrolase family 20, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Invasin/intimin cell-adhesion fragments|Ricin B, lectin domain GO:0004553|GO:0004563|GO:0005975 G3DSA:2.60.120.260|G3DSA:2.60.40.1080|G3DSA:2.80.10.50|G3DSA:3.20.20.80|G3DSA:3.30.379.10|PF00728|PF00754|PF02368|PF02838|PR00738|PTHR22600|SM00635|SSF49373|SSF49785|SSF50370|SSF51445|SSF55545 BBPR_1439 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003703|IPR029069 Acyl-CoA thioesterase|HotDog domain GO:0006637|GO:0047617 G3DSA:3.10.129.10|PF13622|PTHR11066|PTHR11066:SF34|SSF54637 BBPR_1441 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021517 Protein of unknown function DUF3180 PF11377 BBPR_1442 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000550|IPR006156|IPR006157 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK|Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0003848|GO:0004150|GO:0006760|GO:0009396 G3DSA:3.30.1130.10|G3DSA:3.30.70.560|PF01288|PF02152|PS00794|PTHR20941|PTHR20941:SF10|SM00905|SSF55083|SSF55620|TIGR00525|TIGR00526|TIGR01498 BBPR_1443 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00792|PS00793|PTHR20941|PTHR20941:SF1|SSF51717|TIGR01496 BBPR_1444 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001474|IPR018234|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain|GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|PS00860|PTHR11109|SSF55620|TIGR00063 BBPR_1445 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0016020 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PS00674|PTHR23076|PTHR23076:SF10|SM00382|SSF140990|SSF52540|TIGR01241 BBPR_1446 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000836|IPR005904|IPR029057 Hypoxanthine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004422|GO:0005737|GO:0006166|GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR22573|PTHR22573:SF56|SSF53271|TIGR01203 BBPR_1447 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011063|IPR012094|IPR012795|IPR014729|IPR015262 Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase , substrate-binding domain|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|PF09179|PTHR11807|PTHR11807:SF2|SSF52402|SSF82829|TIGR02432 BBPR_1448 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000667|IPR012338 Beta-lactamase/transpeptidase-like|Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 G3DSA:3.40.710.10|PF02113|PR00922|PTHR30023|PTHR30023:SF0|SSF56601 BBPR_1450 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF593|SM00382|SSF52540 BBPR_1451 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR10859|PTHR10859:SF96|SSF53448 BBPR_1452 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716 BBPR_1453 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 BBPR_1454 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001670|IPR013460|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site|Lactaldehyde reductase GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|PTHR11496|PTHR11496:SF77|SSF56796|TIGR02638 BBPR_1455 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025241 Domain of unknown function DUF4190 PF13828 BBPR_1456 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001509|IPR005886|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|UDP-glucose 4-epimerase GalE GO:0003824|GO:0003978|GO:0006012|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF39|SSF51735|TIGR01179 BBPR_1457 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 MF_01057|PF02390|PTHR23417|PTHR23417:SF14|SSF53335|TIGR00091 BBPR_1459 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001927|IPR020846 Major facilitator superfamily domain|Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 G3DSA:1.20.1250.20|PF13347|PTHR11328|SSF103473|TIGR00792 BBPR_1460 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004199|IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR011013|IPR013781|IPR013812|IPR014718|IPR017853|IPR023230|IPR023232|IPR032312 Beta galactosidase small chain/ domain 5|Beta-galactosidase, domain 4|Galactose mutarotase-like domain|Galactose-binding domain-like|Glycoside hydrolase family 2, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, active site|Glycoside hydrolase, family 2, conserved site|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycosyl hydrolases family 2, sugar binding domain GO:0003824|GO:0004553|GO:0004565|GO:0005975|GO:0009341|GO:0030246 G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:2.70.98.10|G3DSA:3.20.20.80|PF00703|PF02836|PF02837|PF02929|PF16353|PR00132|PS00608|PS00719|PTHR10066|PTHR10066:SF72|SM01038|SSF49303|SSF49785|SSF51445|SSF74650 BBPR_1461 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR032466 Metal-dependent hydrolase G3DSA:3.20.20.140|SSF51556 BBPR_1462 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|PTHR30146|PTHR30146:SF30|SM00354|SSF47413|SSF53822 BBPR_1463 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR003661 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PTHR24423|SM00387|SM00388|SSF47384|SSF55874 BBPR_1465 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002477 Peptidoglycan binding-like G3DSA:1.10.101.10|SSF47090 BBPR_1466 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 BBPR_1469 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687 BBPR_1470 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30489 BBPR_1471 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF587|SM00382|SSF52540 BBPR_1472 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008407 Branched-chain amino acid transport, AzlD PF05437|PIRSF003203 BBPR_1473 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PTHR22604|PTHR22604:SF105|SSF51735|SSF55347 BBPR_1475 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR017867|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 G3DSA:3.40.50.270|PF01451|PR00719|PTHR11717|SM00226|SSF52788 BBPR_1476 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001796|IPR012259|IPR017925|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PR00070|PS00075|PTHR22778|PTHR22778:SF16|SSF53597 BBPR_1477 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000398|IPR020940|IPR023451 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|PTHR11548|SSF55831|TIGR03284 BBPR_1478 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|SSF82784 BBPR_1479 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF42|SSF52402 BBPR_1480 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|PTHR21666|SSF54001 BBPR_1481 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007921 CHAP domain PF05257|PTHR33308|PTHR33308:SF2|SSF54001 BBPR_1482 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000192|IPR006272|IPR015421|IPR015422|IPR015424|IPR022278 Aminotransferase class V domain|Phosphoserine aminotransferase|Phosphoserine aminotransferase, Mycobacterial-type|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004648|GO:0006564|GO:0009058 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000525|PTHR21152|PTHR21152:SF20|SSF53383|TIGR01366 BBPR_1484 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|SM00387|SSF47384|SSF55874 BBPR_1485 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|PTHR10010|PTHR10010:SF14|SSF109755|TIGR02135 BBPR_1487 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PS00175|PTHR11931|SM00855|SSF53254|TIGR01258 BBPR_1488 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000537|IPR004657|IPR026046 1,4-dihydroxy-2-naphthoate octaprenyltransferase|UbiA prenyltransferase domain containing protein 1|UbiA prenyltransferase family GO:0004659|GO:0009234|GO:0016021|GO:0046428 MF_01937|PF01040|PIRSF005355|PTHR13929|PTHR13929:SF0|TIGR00751 BBPR_1489 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|PTHR22594|PTHR22594:SF4|SSF50249|SSF55681|TIGR00499 BBPR_1490 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF16|SSF103473 BBPR_1491 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011990|IPR019734|IPR025117 Domain of unknown function DUF4037|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13228|PF13424|PTHR19959|PTHR19959:SF165|SM00028|SSF48452 BBPR_1492 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025191 Protein of unknown function DUF4125 PF13526 BBPR_1494 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007168 Phage shock protein, PspC, N-terminal PF04024 BBPR_1495 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR007168 Histidine kinase-like ATPase, C-terminal domain|Phage shock protein, PspC, N-terminal G3DSA:3.30.565.10|PF04024|SSF55874 BBPR_1496 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 BBPR_1497 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006113|IPR006114|IPR006115|IPR006183|IPR008927|IPR012284|IPR013328|IPR016040 6-phosphogluconate dehydrogenase|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, C-terminal|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, decarboxylating|6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase, domain 3|NAD(P)-binding domain GO:0004616|GO:0006098|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:1.20.5.320|G3DSA:3.40.50.720|PF00393|PF03446|PIRSF000109|PR00076|PTHR11811|PTHR11811:SF25|SM01350|SSF48179|SSF51735|TIGR00873 BBPR_1498 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005900|IPR006148 6-phosphogluconolactonase, DevB-type|Glucosamine/galactosamine-6-phosphate isomerase GO:0005975|GO:0006098|GO:0017057 G3DSA:3.40.50.1360|PF01182|PTHR11054|SSF100950|TIGR01198 BBPR_1499 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA PF10128|PTHR38658|PTHR38658:SF1 BBPR_1500 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001282|IPR016040|IPR019796|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871 BBPR_1503 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR007781|IPR008979|IPR024240|IPR024732|IPR024733 Alpha-N-acetylglucosaminidase|Alpha-N-acetylglucosaminidase, C-terminal|Alpha-N-acetylglucosaminidase, N-terminal|Alpha-N-acetylglucosaminidase, tim-barrel domain|Coagulation factor 5/8 C-terminal domain|Galactose-binding domain-like G3DSA:2.60.120.260|PF00754|PF05089|PF12971|PF12972|PTHR12872|PTHR12872:SF1|SSF49785 BBPR_1504 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|PTHR11778|PTHR11778:SF8|SSF46589|SSF55681|TIGR00414 BBPR_1505 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001322|IPR004843|IPR005135|IPR006179|IPR008334|IPR029052 5'-Nucleotidase, C-terminal|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, apaH type|Endonuclease/exonuclease/phosphatase|Lamin Tail Domain|Metallo-dependent phosphatase-like GO:0009166|GO:0016787 G3DSA:3.60.10.10|G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF00932|PF02872|PF03372|PR01607|PTHR11575|PTHR11575:SF7|SSF55816|SSF56219|SSF56300|SSF74853 BBPR_1506 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001206|IPR016064|IPR017438 Diacylglycerol kinase, catalytic domain|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0008152|GO:0016301 G3DSA:3.40.50.10330|PF00781|PTHR12358|PTHR12358:SF43|SM00046|SSF111331 BBPR_1507 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004341|IPR011608 CAT RNA-binding domain|PRD domain GO:0003723|GO:0006355 G3DSA:1.10.1790.10|G3DSA:2.30.24.10|PF00874|PF03123|PTHR30185|PTHR30185:SF2|SM01061|SSF50151|SSF63520 BBPR_1508 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001127|IPR001996|IPR003352|IPR011055|IPR018113 Duplicated hybrid motif|Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1|Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0008982|GO:0009401|GO:0016020 G3DSA:2.70.70.10|G3DSA:3.30.1360.60|PF00358|PF00367|PF02378|PS00371|PS01035|PTHR30175|PTHR30175:SF1|SSF51261|SSF55604|TIGR00830 BBPR_1509 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009003 Peptidase S1, PA clan G3DSA:2.40.10.10|SSF50494 BBPR_1511 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022464 Streptococcal pilin isopeptide linker PF12892|TIGR03786 BBPR_1512 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005843|IPR005844|IPR005845|IPR005846|IPR005852|IPR016055|IPR016066 Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucomutase, alpha-D-glucose specific GO:0000287|GO:0004614|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PS00710|PTHR22573|PTHR22573:SF52|SSF53738|SSF55957|TIGR01132 BBPR_1513 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004099|IPR012999|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF145|SSF51905|SSF55424 BBPR_1514 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR008979|IPR011496|IPR015882|IPR017853|IPR029018 Beta-N-acetylglucosaminidase|Beta-hexosaminidase, bacteial type, N-terminal|Chitobiase/beta-hexosaminidase domain 2-like|Coagulation factor 5/8 C-terminal domain|Galactose-binding domain-like|Glycoside hydrolase superfamily G3DSA:2.60.120.260|G3DSA:3.30.379.10|PF00754|PF02838|PF07555|PTHR13170|PTHR13170:SF20|SSF140657|SSF49785|SSF51445|SSF55545 BBPR_1515 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002156|IPR012337 Ribonuclease H domain|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|PF00075|PTHR10642|SSF53098 BBPR_1516 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004788|IPR020672 Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|PTHR11934|SSF100950|SSF75445|TIGR00021 BBPR_1518 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF13481|PF13541|PR01874|PTHR32472|PTHR32472:SF10|SM00382|SSF52540|SSF54211|TIGR00416 BBPR_1519 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR014729|IPR015864|IPR015865|IPR023465|IPR023468 FAD synthetase|Riboflavin kinase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PTHR22749|PTHR22749:SF0|SM00904|SSF52374|SSF82114 BBPR_1520 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002501|IPR014780|IPR015225|IPR020103|IPR032819 Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 MF_01080|PF01509|PF09142|PF16198|PTHR13767|PTHR13767:SF2|SSF55120 BBPR_1521 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000238|IPR015946|IPR020053|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain|Ribosome-binding factor A, conserved site GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PS01319|PTHR33515|SSF89919|TIGR00082 BBPR_1522 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000178|IPR000795|IPR005225|IPR006847|IPR009000|IPR023115|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0003924|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF11987|PR00315|PTHR23115|PTHR23115:SF184|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 BBPR_1523 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009019|IPR010213|IPR012340|IPR013735|IPR015946|IPR025249|IPR030842 K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination/antitermination protein NusA, bacterial GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF08529|PF13184|PTHR22648|PTHR22648:SF0|SSF50249|SSF54814|SSF69705|TIGR01953 BBPR_1526 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|PTHR33490|SM00460|SSF54001 BBPR_1527 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007296|IPR007302 Circularly permuted ATPgrasp domain|Domain of unknown function DUF403 PF04168|PF04174|PTHR34595|PTHR34595:SF3|SSF56059 BBPR_1528 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|PTHR11142|PTHR11142:SF0|SSF55120 BBPR_1529 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR008979|IPR013320|IPR013781|IPR015882|IPR015883|IPR017853|IPR022038|IPR025705|IPR029018 Bacterial Ig-like domain|Beta-hexosaminidase|Beta-hexosaminidase, bacteial type, N-terminal|Chitobiase/beta-hexosaminidase domain 2-like|Coagulation factor 5/8 C-terminal domain|Concanavalin A-like lectin/glucanase domain|Galactose-binding domain-like|Glycoside hydrolase family 20, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0004553|GO:0004563|GO:0005975 G3DSA:2.60.120.260|G3DSA:3.20.20.80|G3DSA:3.30.379.10|PF00728|PF00754|PF02838|PF07523|PR00738|PTHR22600|SSF49785|SSF49899|SSF51445|SSF55545 BBPR_1530 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|PTHR14413|PTHR14413:SF5|SSF64263|TIGR00059 BBPR_1531 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|PTHR32108|PTHR32108:SF0|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 BBPR_1532 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|PTHR11759|SSF53137|TIGR03632 BBPR_1533 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|PTHR10871|SSF46946|TIGR03631 BBPR_1534 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PD002101|PF00444|PS00828|PTHR18804|SSF57840|TIGR01022 BBPR_1535 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004368|IPR006196|IPR012340 Nucleic acid-binding, OB-fold|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|PTHR33370|SSF50249|TIGR00008 BBPR_1536 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000850|IPR027417 Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006139|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PR00094|PS00113|PTHR23359|SSF52540 BBPR_1537 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PTHR10906|PTHR10906:SF2|SSF103491|TIGR00967 BBPR_1538 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001196|IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|PTHR12934|SSF52080|TIGR01071 BBPR_1539 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005996|IPR016082 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PTHR15892|SSF55129|TIGR01308 BBPR_1540 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000851|IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|PTHR13718|SSF54211|SSF54768|TIGR01021 BBPR_1541 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|PTHR12899|SSF53137|TIGR00060 BBPR_1542 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|PF00347|PIRSF002162|PR00059|PS00525|PTHR11655|PTHR11655:SF14|SSF56053|TIGR03654 BBPR_1543 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PTHR11758|SSF56047 BBPR_1544 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001209|IPR018271|IPR023053 Ribosomal protein S14|Ribosomal protein S14, conserved site|Ribosomal protein S14, type Z GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_01364_B|PF00253|PS00527|PTHR19836|SSF57716 BBPR_1545 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002132|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PTHR11994|SSF55282 BBPR_1546 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|PS01108|PTHR12903|SM00739|SSF50104|TIGR01079 BBPR_1547 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|PTHR11761|SM01374|SSF50193|TIGR01067 BBPR_1548 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|PTHR10744|PTHR10744:SF1|SSF50249|TIGR03635 BBPR_1549 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001854|IPR018254 Ribosomal protein L29|Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|PTHR10916|SSF46561|TIGR00012 BBPR_1550 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|PTHR12220|SSF54686|TIGR01164 BBPR_1551 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|PTHR11760|PTHR11760:SF19|SM00322|SSF54814|SSF54821|TIGR01009 BBPR_1552 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001063|IPR005727|IPR018260 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|PF00237|PS00464|PTHR13501|SSF54843|TIGR01044 BBPR_1553 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|PTHR11880|SSF54570|TIGR01050 BBPR_1554 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PTHR13691|PTHR13691:SF5|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 BBPR_1555 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|PTHR11620|SSF54189 BBPR_1556 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|PTHR10746|SSF52166|TIGR03953 BBPR_1557 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|PTHR11229|SSF50447|TIGR03625 BBPR_1558 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|PTHR11700|SM01403|SSF54999|TIGR01049 BBPR_1559 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic G3DSA:1.10.390.10|SSF55486 BBPR_1560 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR022038 Bacterial Ig-like domain PF07523 BBPR_1562 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 G3DSA:3.30.1330.80|PF03306|PIRSF001332|PTHR35524|SSF117856|TIGR01252 BBPR_1563 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001670|IPR012079|IPR015590|IPR016161|IPR016162|IPR016163|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site|Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008152|GO:0008774|GO:0015976|GO:0016491|GO:0016620|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.309.10|G3DSA:3.40.50.1970|G3DSA:3.40.605.10|PF00171|PF00465|PIRSF000111|PS00060|PTHR11496|PTHR11496:SF79|SSF53720|SSF56796 BBPR_1564 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF108|SSF46785|SSF53067 BBPR_1565 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004193|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004553|GO:0005975 G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF02922|PTHR10357|PTHR10357:SF152|SSF51445|SSF81296 BBPR_1566 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013781|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13 GO:0003824|GO:0005975 G3DSA:3.20.20.80|PTHR10357|PTHR10357:SF74|SSF51445 BBPR_1568 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|PTHR21569|SSF54211 BBPR_1569 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005822|IPR005823|IPR023563|IPR023564 Ribosomal protein L13|Ribosomal protein L13 domain|Ribosomal protein L13, bacterial-type|Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PS00783|PTHR11545|SSF52161|TIGR01066 BBPR_1571 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003385|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 77 GO:0004134|GO:0005975 G3DSA:3.20.20.80|PF02446|PTHR32438|PTHR32438:SF5|SSF51445|TIGR00217 BBPR_1572 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004830|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|Leucine rich repeat variant GO:0005488 G3DSA:1.25.10.10|PF01816|SSF48371 BBPR_1573 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000640|IPR001498|IPR009022|IPR015269|IPR020568|IPR023582 Elongation factor G, III-V domain|Impact family|Impact, N-terminal|Ribosomal protein S5 domain 2-type fold|Translation elongation factor EFG, V domain|Uncharacterised domain UPF0029, Impact, C-terminal G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|PF09186|PTHR16301|SSF54211|SSF54980 BBPR_1574 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR019079|IPR029052 Capsule synthesis protein, CapA|Metallo-dependent phosphatase-like G3DSA:3.60.21.10|PF09587|PTHR33393|PTHR33393:SF2|SM00854|SSF56300 BBPR_1575 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001126|IPR017961|IPR022880 DNA polymerase IV|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11799|PF14520|PTHR11076|SSF100879|SSF56672 BBPR_1576 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004839|IPR015421|IPR015422|IPR015424|IPR019880 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Succinyldiaminopimelate transaminase, DapC, actinobacteria GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF354|SSF53383|TIGR03539 BBPR_1577 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000813|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin GO:0009055 G3DSA:3.30.70.20|PF00037|PR00354|PS00198|PTHR11938|PTHR11938:SF82|SSF54862 BBPR_1578 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|PTHR21071|PTHR21071:SF6|SSF56176|SSF56194 BBPR_1579 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001705|IPR011332|IPR018264 Ribosomal protein L33|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PS00582|PTHR15238|PTHR15238:SF3|SSF57829|TIGR01023 BBPR_1581 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic G3DSA:1.10.8.300 BBPR_1582 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012338 Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF13354|PTHR35333|PTHR35333:SF3|SSF56601 BBPR_1583 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|PTHR10772|SM00883|SSF50129 BBPR_1586 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|SSF55729 BBPR_1587 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727 BBPR_1588 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004039|IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain|Rubredoxin-type fold G3DSA:2.20.28.10|PF09723|PTHR34404|SM00834|SSF57802|TIGR02605 BBPR_1589 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|SM00858 BBPR_1592 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000253|IPR008984 Forkhead-associated (FHA) domain|SMAD/FHA domain GO:0005515 G3DSA:2.60.200.20|PF00498|SSF49879 BBPR_1593 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 BBPR_1594 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001790|IPR002363|IPR022973 Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254 MF_00362|PF00466|PS01109|PTHR11560|SSF160369 BBPR_1595 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|SSF52266 BBPR_1596 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003343|IPR008964|IPR011040|IPR013320|IPR025150 Bacterial Ig-like, group 2|Concanavalin A-like lectin/glucanase domain|Domain of unknown function DUF4091|Invasin/intimin cell-adhesion fragments|Sialidases G3DSA:2.120.10.10|G3DSA:2.60.120.200|G3DSA:2.60.40.1080|PF02368|PF13088|PF13320|PF13385|SM00635|SSF49373|SSF49899|SSF50939 BBPR_1598 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006043|IPR026033|IPR029940 AzgA purine transporter|Purine permease PbuG-like|Xanthine/uracil/vitamin C permease GO:0005215|GO:0005345|GO:0006810|GO:0006863|GO:0016020|GO:0055085 PF00860|PIRSF005353|PTHR11119|PTHR11119:SF9 BBPR_1599 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011335 Restriction endonuclease type II-like PTHR37044|SSF52980 BBPR_1600 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF585|SM00382|SSF52540|TIGR00972 BBPR_1601 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515|IPR005672 ABC transporter type 1, transmembrane domain MetI-like|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF0|SSF161098|TIGR00974 BBPR_1602 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000515|IPR011864 ABC transporter type 1, transmembrane domain MetI-like|Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006810|GO:0006817|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF1|SSF161098|TIGR02138 BBPR_1603 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005673|IPR024370 ABC transporter, phosphate-binding protein PstS|PBP domain GO:0035435|GO:0042301|GO:0043190 G3DSA:3.40.190.10|PF12849|PIRSF002756|PTHR30570|PTHR30570:SF0|SSF53850|TIGR00975 BBPR_1604 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF459|SM00448|SM00862|SSF46894|SSF52172 BBPR_1605 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF394|SM00387|SM00388|SSF47384|SSF55874 BBPR_1606 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000845|IPR010049|IPR018017 MTA/SAH nucleosidase|Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0008782|GO:0008930|GO:0009116|GO:0009164|GO:0019509 G3DSA:3.40.50.1580|PF01048|PTHR21234|SSF53167|TIGR01704 BBPR_1607 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PTHR21225|SSF51569|TIGR00034 BBPR_1608 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000835|IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|SM00347|SM00418|SSF46785 BBPR_1609 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23513|SSF103473 BBPR_1610 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|PTHR21225|SSF51569|TIGR00034 BBPR_1611 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008613|IPR011089 Domain of unknown function DUF1524|Excalibur calcium-binding domain PF05901|PF07510|PTHR24094|PTHR24094:SF10|SM00894 BBPR_1612 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000169|IPR004134 Cysteine peptidase, cysteine active site|Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 G3DSA:3.90.70.10|PF03051|PIRSF005700|PS00139|PTHR10363|SSF54001 BBPR_1615 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000816|IPR016125 Peptidase C15, pyroglutamyl peptidase I|Peptidase C15, pyroglutamyl peptidase I-like GO:0005829|GO:0006508|GO:0016920 G3DSA:3.40.630.20|PF01470|PIRSF015592|PS01334|PTHR23402|SSF53182 BBPR_1616 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001228|IPR029044 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0008299|GO:0050518 G3DSA:3.90.550.10|MF_00108|PF01128|PTHR32125|PTHR32125:SF4|SSF53448 BBPR_1617 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase G3DSA:3.60.140.10|PF02578|PTHR30616|SSF64438 BBPR_1618 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001539|IPR032525 Peptidase U32|Peptidase family U32, C-terminal GO:0006508|GO:0008233 PF01136|PF16325|PS01276|PTHR30217|PTHR30217:SF6 BBPR_1619 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025246 Transposase IS30-like HTH domain PF13936|PTHR10948 BBPR_1620 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001598|IPR012337 Ribonuclease H-like domain|Transposase, IS30, conserved site GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.420.10|PS01043|PTHR10948|SSF53098 BBPR_1621 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF275|SSF51430 BBPR_1622 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002109|IPR012336 Glutaredoxin|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PTHR34386|PTHR34386:SF3|SSF52833 BBPR_1623 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004465|IPR020852|IPR029039 Flavoprotein-like domain|Ribonucleotide reductase Class Ib, NrdI|Ribonucleotide reductase, class Ib, NrdI, bacterial G3DSA:3.40.50.360|MF_00128|PF07972|PTHR37297|PTHR37297:SF1|SSF52218|TIGR00333 BBPR_1624 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000788|IPR008926|IPR013346|IPR013509|IPR013554|IPR026459 Ribonucleotide reductase N-terminal|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class 1b, subunit NrdE|Ribonucleotide reductase, class I , alpha subunit GO:0004748|GO:0005524|GO:0006260|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PF08343|PR01183|PS00089|PTHR11573|SSF48168|SSF51998|TIGR02506|TIGR04170 BBPR_1625 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000358|IPR009078|IPR012348|IPR026494|IPR030475 Ferritin-like superfamily|Ribonucleoside reductase subunit beta, NrdF|Ribonucleotide reductase small subunit|Ribonucleotide reductase small subunit, acitve site|Ribonucleotide reductase-related GO:0005971|GO:0009186|GO:0009263|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|PIRSF000355|PS00368|PTHR23409|SSF47240|TIGR04171 BBPR_1626 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000277|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170 G3DSA:3.90.1150.10|PF01053|PTHR11808|PTHR11808:SF15|SSF53383 BBPR_1627 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018702 Protein of unknown function DUF2207, membrane PF09972 BBPR_1628 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|PTHR34478|PTHR34478:SF2|SSF140478 BBPR_1629 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982 Lambda repressor-like, DNA-binding domain|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|PF00356|PTHR30146|SM00354|SSF47413 BBPR_1630 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic G3DSA:3.40.50.2300 BBPR_1631 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR014069|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0005737|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03726|PTHR11252|PTHR11252:SF0|SM00316|SM00322|SSF46915|SSF50249|SSF54211|SSF54791|SSF55666|TIGR02696|TIGR03591 BBPR_1633 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|PTHR23321|SM01387|SSF47060|TIGR00952 BBPR_1635 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000421|IPR008979|IPR011496|IPR015882|IPR017853|IPR029018 Beta-N-acetylglucosaminidase|Beta-hexosaminidase, bacteial type, N-terminal|Chitobiase/beta-hexosaminidase domain 2-like|Coagulation factor 5/8 C-terminal domain|Galactose-binding domain-like|Glycoside hydrolase superfamily G3DSA:2.60.120.260|G3DSA:3.30.379.10|PF00754|PF02838|PF07555|PTHR13170|PTHR13170:SF20|SSF140657|SSF49785|SSF51445|SSF55545 BBPR_1636 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 G3DSA:3.30.930.10|PTHR12835|SSF55681 BBPR_1637 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004568|IPR008278 4'-phosphopantetheinyl transferase superfamily|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|PD004282|PF01648|SSF56214|TIGR00556 BBPR_1638 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001227|IPR002539|IPR003965|IPR013565|IPR013785|IPR014030|IPR014031|IPR014043|IPR016035|IPR016039|IPR016040|IPR018201|IPR020801|IPR029069 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Aldolase-type TIM barrel|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Domain of unknown function DUF1729|Fatty acid synthase|HotDog domain|MaoC-like domain|NAD(P)-binding domain|Polyketide synthase, acyl transferase domain|Thiolase-like GO:0003824|GO:0004312|GO:0004318|GO:0005835|GO:0006633|GO:0008152|GO:0016740|GO:0055114 G3DSA:3.10.129.10|G3DSA:3.20.20.70|G3DSA:3.40.366.10|G3DSA:3.40.47.10|G3DSA:3.40.50.720|PF00109|PF00698|PF01575|PF02801|PF08354|PR01483|PS00606|PTHR10982|PTHR10982:SF17|SM00827|SSF51412|SSF51735|SSF52151|SSF53901|SSF54637 BBPR_1639 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000022|IPR000438|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|PF01039|PR01070|PTHR22855|PTHR22855:SF14|SSF52096 BBPR_1640 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000089|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF02785|PF02786|PS00867|PTHR18866|SM00878|SSF51230|SSF51246|SSF52440|SSF56059 BBPR_1641 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 PF02632|PIRSF016661|PTHR34295|PTHR34295:SF1 BBPR_1642 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004143|IPR004408 Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0004077|GO:0006464 G3DSA:3.30.930.10|PF03099|PTHR12835|SSF55681|TIGR00121 BBPR_1644 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025736 PucR C-terminal helix-turn-helix domain PF13556|PTHR33744|PTHR33744:SF2 BBPR_1645 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002793|IPR011856 Endonuclease NucS|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00722|PF01939|PTHR38814|PTHR38814:SF2 BBPR_1646 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001469|IPR020546 ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:2.60.15.10|PD000944|PF02823|PTHR13822|SSF51344 BBPR_1647 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR024034|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PTHR15184|PTHR15184:SF8|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 BBPR_1648 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000131|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit domain GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PTHR11693|SSF52943|TIGR01146 BBPR_1649 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PS00152|PTHR15184|PTHR15184:SF3|SSF47917|SSF50615|SSF52540|TIGR00962 BBPR_1650 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000711|IPR020781 ATPase, OSCP/delta subunit|ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 MF_01416|PF00213|PR00125|PS00389|PTHR11910|PTHR11910:SF1 BBPR_1651 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002146|IPR005864|IPR028987 ATPase, F0 complex, subunit B, bacterial|ATPase, F0 complex, subunit B/B', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|PTHR33445|SSF81573|TIGR01144 BBPR_1652 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000454|IPR002379|IPR005953|IPR020537 ATPase, F0 complex, subunit C|ATPase, F0 complex, subunit C, DCCD-binding site|ATPase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|PTHR10031|SSF81333|TIGR01260 BBPR_1653 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000568|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|PTHR11410|SSF81336|TIGR01131 BBPR_1654 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005697|IPR029062 Class I glutamine amidotransferase-like|Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 G3DSA:3.40.50.880|MF_00295|PD037892|PF04204|PIRSF000450|PTHR20919|PTHR20919:SF0|SSF52317|TIGR01001 BBPR_1655 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system PF04365 BBPR_1658 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006047|IPR013780|IPR013781|IPR015902|IPR017853|IPR021828|IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase|Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0004553|GO:0005975|GO:0016757 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_02124|PF00128|PF11896|PTHR10357|PTHR10357:SF137|SM00642|SSF51445 BBPR_1659 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|MF_00209|PF00719|PS00387|PTHR10286|SSF50324 BBPR_1660 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003810|IPR022929 Putative manganese efflux pump|Putative manganese efflux pump MntP MF_01521|PF02659|PTHR35529 BBPR_1662 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001867|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|PTHR26402|PTHR26402:SF506|SM00862|SSF46894 BBPR_1663 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000445|IPR003265|IPR003651|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PF10576|PIRSF001435|PS01155|PTHR10359|SM00478|SM00525|SSF48150|TIGR01083 BBPR_1664 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|SSF53850 BBPR_1665 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR013155|IPR014729|IPR022874 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valine-tRNA ligase, type 2|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0006418|GO:0006438 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02005|PF00133|PF08264|PR00986|PS00178|PTHR11946|PTHR11946:SF5|SSF47323|SSF50677|SSF52374 BBPR_1667 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002701|IPR010951|IPR020822 Chorismate mutase|Chorismate mutase, bacteria|Chorismate mutase, type II GO:0046417 G3DSA:1.20.59.10|PF01817|SM00830|SSF48600|TIGR01795 BBPR_1668 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PTHR30154|SM00344|SSF46785|SSF54909 BBPR_1669 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PR00753|PS00105|PTHR11751|PTHR11751:SF306|SSF53383 BBPR_1670 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|PTHR15184|PTHR15184:SF34|SM00357|SM00382|SM00959|SSF50249|SSF52540|TIGR00767 BBPR_1672 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|PTHR10742:SF279|SSF51971 BBPR_1673 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR019592 Protein of unknown function DUF2469 PF10611 BBPR_1674 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|PTHR13256:SF39|SSF55729 BBPR_1675 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003789|IPR004413|IPR006075|IPR017958|IPR017959|IPR018027|IPR023168 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016874|GO:0016884 G3DSA:1.10.10.410|MF_00121|PF02637|PF02934|PS01234|PTHR11659|PTHR11659:SF0|SM00845|SSF55931|SSF89095|TIGR00133 BBPR_1676 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000120|IPR004412|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0016884 G3DSA:3.90.1300.10|MF_00120|PF01425|PS00571|PTHR11895|PTHR11895:SF75|SSF75304|TIGR00132 BBPR_1677 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MF_00122|PF02686|PTHR15004|PTHR15004:SF0|SSF141000|TIGR00135 BBPR_1679 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF523|SSF52540 BBPR_1680 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001537|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|PTHR12029|SSF75217 BBPR_1682 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003798 DNA recombination RmuC PF02646|PTHR30563 BBPR_1683 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 PF02583|PTHR33677|PTHR33677:SF3 BBPR_1684 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001757|IPR007029|IPR008250|IPR008972|IPR009078|IPR011017|IPR018303|IPR023214|IPR028096 Cupredoxin|EfeO-type cupredoxin-like domain|Ferritin-like superfamily|HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, phosphorylation site|TRASH domain|YHS domain GO:0000166|GO:0016021|GO:0046872 G3DSA:2.60.40.420|G3DSA:2.70.150.10|G3DSA:3.40.50.1000|PF00122|PF00702|PF04945|PF13473|PR00943|PS00154|PTHR24093|PTHR24093:SF50|SM00746|SSF47240|SSF49503|SSF56784|SSF81653|SSF81665|TIGR01494 BBPR_1685 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004147|IPR011009 Protein kinase-like domain|UbiB domain G3DSA:3.90.1200.10|PF03109|PTHR10566|SSF56112 BBPR_1687 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011698|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 G3DSA:3.40.50.880|PF07685|PTHR21343|PTHR21343:SF9|SSF52317 BBPR_1688 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013221|IPR013564|IPR018109 Domain of unknown function DUF1727|Folylpolyglutamate synthetase, conserved site|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396 G3DSA:3.40.1190.10|PF08245|PF08353|PS01011|PTHR23135|PTHR23135:SF7|SSF53623 BBPR_1689 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PTHR30153|SSF48024|SSF52540|TIGR00665 BBPR_1690 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PTHR11206|PTHR11206:SF94|TIGR00797 BBPR_1691 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002934|IPR006674 HD domain|Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:1.10.3210.10|G3DSA:3.30.460.10|PF01909|PF01966|PTHR13734|PTHR13734:SF45|SSF109604|SSF81301 BBPR_1692 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PR00340|PS00496|PS00638|PTHR30115|SM00938|SSF54913 BBPR_1693 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001905|IPR018047|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium/urea transporter GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PS01219|PTHR11730|PTHR11730:SF17|SSF111352|TIGR00836 BBPR_1694 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|PTHR11564|PTHR11564:SF16|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 BBPR_1696 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|PTHR30328|PTHR30328:SF12|SSF46689|SSF48498 BBPR_1697 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF24|SSF53448 BBPR_1698 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 PF11308 BBPR_1699 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PF03577|PTHR12994|PTHR12994:SF17 BBPR_1701 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003339 ABC/ECF transporter, transmembrane component PF02361|PTHR33514|PTHR33514:SF5 BBPR_1703 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF271|SM00382|SSF52540|SSF90123 BBPR_1704 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF190|SM00382|SSF52540|SSF90123 BBPR_1705 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 BBPR_1707 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008454|IPR013783|IPR019931 Collagen-binding surface protein Cna-like, B-type domain|Immunoglobulin-like fold|LPXTG cell wall anchor domain G3DSA:2.60.40.10|PF05738|SSF117074|TIGR01167 BBPR_1708 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000601 PKD domain G3DSA:2.60.40.670|SSF49299 BBPR_1709 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005754|IPR023365 Sortase domain|Sortase family G3DSA:2.40.260.10|PF04203|PTHR33393|PTHR33393:SF5|SSF63817|TIGR01076 BBPR_1710 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000150|IPR023214 Cof protein|HAD-like domain GO:0016787 G3DSA:3.40.50.1000|PF08282|PS01229|PTHR10000|PTHR10000:SF8|SSF56784|TIGR00099 BBPR_1711 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 PF06541 BBPR_1713 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF08282|PS01229|PTHR10000|PTHR10000:SF8|SSF56784 BBPR_1714 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001360|IPR013781|IPR017853|IPR018120|IPR033132 Glycoside hydrolase family 1|Glycoside hydrolase family 1, active site|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolases family 1, N-terminal conserved site GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00232|PR00131|PS00572|PS00653|PTHR10353|PTHR10353:SF35|SSF51445 BBPR_1715 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 G3DSA:1.20.58.80|PF02255|PIRSF000699|PTHR34382|SSF46973 BBPR_1716 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.270|PF02302|PTHR34581|PTHR34581:SF2|SSF52794 BBPR_1717 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003352|IPR004501|IPR004796 Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 3|Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016020|GO:0016021 PF02378|PIRSF006351|PTHR33989|TIGR00410 BBPR_1718 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF08282|PTHR10000|PTHR10000:SF8|SSF56784 BBPR_1719 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|SSF56784 BBPR_1720 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PTHR11751|PTHR11751:SF292|SM00345|SM00866|SSF46785|SSF64288 BBPR_1721 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007329 FMN-binding GO:0010181|GO:0016020 PF04205|SM00900 BBPR_1722 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF86|SM00382|SSF52540 BBPR_1723 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30489 BBPR_1724 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489|PTHR30489:SF16 BBPR_1725 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018758 Domain of unknown function DUF2318, membrane PF10080 BBPR_1726 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018470 Periplasmic metal-binding protein Tp34-type PF10634 BBPR_1727 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 PF03239|PTHR31632|PTHR31632:SF4 BBPR_1729 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|SSF143631 BBPR_1730 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46785 BBPR_1731 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003812|IPR025758 Fic/DOC N-terminal|Fido domain G3DSA:1.10.3290.10|PF13784 BBPR_1732 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000121|IPR006318|IPR008279|IPR008731|IPR015813|IPR018274|IPR023151|IPR024692 PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphotransferase system, enzyme I|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008965|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PIRSF000732|PR01736|PS00370|PS00742|PTHR22931|PTHR22931:SF28|SSF47831|SSF51621|SSF52009|TIGR01417 BBPR_1733 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000032|IPR001020 Phosphocarrier HPr protein-like|Phosphotransferase system, HPr histidine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|PTHR33705|SSF55594|TIGR01003 BBPR_1734 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|SM00354|SSF47413|SSF53822 BBPR_1735 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13177|PTHR11669|PTHR11669:SF8|SM00382|SSF52540 BBPR_1736 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018094|IPR018095|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PS01331|PTHR10344|PTHR10344:SF0|SSF52540|TIGR00041 BBPR_1738 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000380|IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013824|IPR013825|IPR023405|IPR023406|IPR025589|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|Topoisomerase C-terminal repeat|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01751|PF13368|PR00417|PS00396|PTHR11390|PTHR11390:SF27|SM00436|SM00437|SM00493|SSF56712|TIGR01051 BBPR_1739 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 BBPR_1740 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000209|IPR003137|IPR011490|IPR015500|IPR022398|IPR023827|IPR023828 FIVAR domain|PA domain|Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:1.20.5.420|G3DSA:3.40.50.200|PF00082|PF02225|PF07554|PR00723|PS00136|PS00137|PS00138|PTHR10795|PTHR10795:SF419|SSF52743 BBPR_1741 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004254|IPR005744 AdipoR/Haemolysin-III-related|Hly-III GO:0016021|GO:0019835 PF03006|PTHR20855|PTHR20855:SF3 BBPR_1742 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004379|IPR015899|IPR016040 NAD(P)-binding domain|UDP-galactopyranose mutase|UDP-galactopyranose mutase, C-terminal GO:0008767 G3DSA:3.40.50.720|PF03275|PF13450|PTHR21197|SSF51971|SSF54373|TIGR00031 BBPR_1743 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF8|SSF53955|SSF56601 BBPR_1744 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000891|IPR002034|IPR005668|IPR013709|IPR013785 2-isopropylmalate synthase|2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_00572|PF00682|PF08502|PS00815|PS00816|PTHR10277|PTHR10277:SF28|SM00917|SSF110921|SSF51569|SSF89000|TIGR00970 BBPR_1745 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR32440|SSF56300 BBPR_1747 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005543 PASTA domain PF03793 BBPR_1749 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000534|IPR005676|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0006531|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01118|PF02774|PIRSF000148|PTHR10174|PTHR10174:SF141|SM00859|SSF51735|SSF55347|TIGR00978 BBPR_1750 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002912|IPR027795 ACT domain|GATS-like ACT domain GO:0008152|GO:0016597 G3DSA:3.30.70.260|PF01842|PF13840|PTHR21499|PTHR21499:SF27|SSF55021 BBPR_1751 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001048|IPR001341|IPR018042 Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate/glutamate/uridylate kinase GO:0004072|GO:0008652 G3DSA:3.40.1160.10|PF00696|PS00324|PTHR21499|PTHR21499:SF27|SSF53633|TIGR00657 BBPR_1752 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|Toprim domain GO:0003677|GO:0006281|GO:0006310 G3DSA:3.40.50.140|MF_00017|PF02132|PF13662|PS01300|PTHR30446|PTHR30446:SF0|SM00493|SSF111304|TIGR00615 BBPR_1753 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003593|IPR008921|IPR012763|IPR022754|IPR027417 AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF13177|PTHR11669|PTHR11669:SF0|SM00382|SSF48019|SSF52540|TIGR02397 BBPR_1755 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001206|IPR016064 Diacylglycerol kinase, catalytic domain|NAD kinase/diacylglycerol kinase-like domain GO:0016301 PF00781|PTHR12358|SSF111331 BBPR_1756 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR021202 Helicase/secretion neighbourhood TadE-like protein TIGR03816 BBPR_1758 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025338 Protein of unknown function DUF4244 PF14029 BBPR_1759 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR018076 Type II secretion system F domain PF00482 BBPR_1761 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PTHR30258|PTHR30258:SF12|SSF52540 BBPR_1762 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BBPR_1763 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|PTHR30218|PTHR30218:SF0|SSF140356|SSF143724|SSF56024|TIGR03705 BBPR_1764 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR013078|IPR015797|IPR020084|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.40.50.1240|G3DSA:3.90.79.10|PF00293|PF00300|PS00893|PTHR22769|PTHR22769:SF27|SM00855|SSF53254|SSF55811 BBPR_1766 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR020486 Uncharacterised protein family MJ1570 PD074023 BBPR_1768 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 BBPR_1770 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR34472|PTHR34472:SF1|SSF54285|TIGR01683 BBPR_1771 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008867|IPR013785 Aldolase-type TIM barrel|Thiazole biosynthesis GO:0003824|GO:0009228 G3DSA:3.20.20.70|PF05690|PTHR34266|SSF110399 BBPR_1773 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF81|SSF53448 BBPR_1774 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025101 Protein of unknown function DUF4012 PF13196 BBPR_1775 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687 BBPR_1776 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF587|SSF52540 BBPR_1777 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF01966|SSF109604 BBPR_1778 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR029055 Nucleophile aminohydrolases, N-terminal G3DSA:3.60.20.10|PF13522|SSF56235 BBPR_1780 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705|PTHR30540 BBPR_1781 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001130|IPR032466 Metal-dependent hydrolase|TatD family GO:0016788 G3DSA:3.20.20.140|PF01026|PIRSF005902|PTHR10060|PTHR10060:SF20|SSF51556 BBPR_1783 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR020846|IPR028082 Major facilitator superfamily domain|Periplasmic binding protein-like I G3DSA:1.20.1250.20|G3DSA:3.40.50.2300|PF13377|PTHR30146|SSF103473|SSF53822 BBPR_1786 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR009080|IPR013155|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Methionine-tRNA ligase, type 1|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:3.40.50.620|MF_00098|PF08264|PF09334|PR01041|PTHR11946|PTHR11946:SF86|SSF47323|SSF52374|SSF57770|TIGR00398 BBPR_1790 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|PTHR21091|PTHR21091:SF18|SSF53790|TIGR00096 BBPR_1791 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353|PTHR30353:SF0 BBPR_1792 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR023198|IPR023214 HAD-like domain|Phosphoglycolate phosphatase, domain 2 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784 BBPR_1793 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011040|IPR013320|IPR013783|IPR013830|IPR018905|IPR026856 Alpha-galactosidase, NEW3 domain|Concanavalin A-like lectin/glucanase domain|Immunoglobulin-like fold|SGNH hydrolase-type esterase domain|Sialidase family|Sialidases GO:0004308 G3DSA:2.120.10.10|G3DSA:2.60.120.200|G3DSA:2.60.40.10|G3DSA:3.40.50.1110|PF10633|PF13088|PF13385|PF13472|PTHR10628|PTHR10628:SF5|SSF49899|SSF50939|SSF52266 BBPR_1794 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR011040|IPR018905|IPR026856 Alpha-galactosidase, NEW3 domain|Sialidase family|Sialidases GO:0004308 G3DSA:2.120.10.10|PF10633|PF13088|PTHR10628|SSF50939 BBPR_1795 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PS00552|PTHR30204|PTHR30204:SF8|SM00422|SSF46955 BBPR_1796 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001623|IPR002939|IPR008971|IPR018253 Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493 BBPR_1797 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|PTHR21237|SSF51064|SSF58014 BBPR_1798 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF173|SSF100920|SSF100934|SSF53067|TIGR02350 BBPR_1800 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001952|IPR017849|IPR017850 Alkaline phosphatase|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152|GO:0016791 G3DSA:3.40.720.10|PF00245|PTHR11596|PTHR11596:SF5|SM00098|SSF53649 BBPR_1801 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|SM00354|SSF47413|SSF53822 BBPR_1804 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|PTHR23029:SF23|SM00855|SSF53254 BBPR_1805 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025329 Protein of unknown function DUF4235 PF14019 BBPR_1806 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000415|IPR016446|IPR029479 Flavin oxidoreductase Frp family|Nitroreductase|Nitroreductase-like GO:0016491|GO:0055114 G3DSA:3.40.109.10|PF00881|PIRSF005426|PTHR23026|PTHR23026:SF98|SSF55469 BBPR_1808 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002575|IPR011009|IPR024165 Aminoglycoside 3-phosphotransferase|Aminoglycoside phosphotransferase|Protein kinase-like domain GO:0005524|GO:0016773|GO:0046677 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF01636|PIRSF000706|SSF56112 BBPR_1809 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003000|IPR026591|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family|Sirtuin family, catalytic core small domain GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|PF02146|PTHR11085|SSF52467 BBPR_1810 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000634|IPR001926|IPR005789 Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, catabolic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006520|GO:0006567|GO:0030170 G3DSA:3.30.70.260|G3DSA:3.40.50.1100|PF00291|PS00165|PTHR10314|PTHR10314:SF17|SSF53686|SSF55021|TIGR01127 BBPR_1811 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR016193|IPR028883 Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251 G3DSA:3.40.140.10|MF_00972|PF14437|PTHR11079|SSF53927 BBPR_1812 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|PTHR10655|PTHR10655:SF17|SSF53474 BBPR_1813 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR006153|IPR018422 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR10110|PTHR10110:SF120 BBPR_1814 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008180|IPR011962|IPR029054 Deoxycytidine triphosphate deaminase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0006229|GO:0008829|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00146|PF00692|PTHR11241|PTHR11241:SF1|SSF51283|TIGR02274 BBPR_1815 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000111|IPR002252|IPR013785|IPR017853|IPR031704|IPR031705 Aldolase-type TIM barrel|Glycoside hydrolase family 27/36, conserved site|Glycoside hydrolase family 36|Glycoside hydrolase superfamily|Glycosyl hydrolase family 36, C-terminal|Glycosyl hydrolase family 36, N-terminal GO:0003824|GO:0004553|GO:0004557|GO:0005975 G3DSA:3.20.20.70|PF02065|PF16874|PF16875|PIRSF005536|PR00743|PS00512|PTHR22762|PTHR22762:SF81|SSF51445 BBPR_1816 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001757|IPR004014|IPR006068|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00121|PS00154|PTHR24093|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494 BBPR_1817 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001537|IPR004441|IPR013123|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|PTHR12029|PTHR12029:SF58|SM00967|SSF55315|SSF75217|TIGR00186 BBPR_1818 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR010440|IPR011009|IPR025111 Domain of unknown function DUF4032|Lipopolysaccharide kinase|Protein kinase-like domain GO:0005524|GO:0016020|GO:0016773 G3DSA:1.10.510.10|PF06293|PF13224|SSF56112 BBPR_1820 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR005754|IPR023365 Sortase domain|Sortase family G3DSA:2.40.260.10|PF04203|PTHR33393|PTHR33393:SF5|SSF63817|TIGR01076 BBPR_1821 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008454|IPR019931|IPR026466|IPR032334 Collagen-binding surface protein Cna-like, B-type domain|Fimbrial isopeptide formation D2 domain|Gram-positive pilin backbone subunit 2, Cna-B-like domain|LPXTG cell wall anchor domain PF05738|PF16569|TIGR01167|TIGR04226 BBPR_1822 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR008970|IPR019931 Collagen-binding surface protein Cna, B-type domain|LPXTG cell wall anchor domain G3DSA:2.60.40.1140|TIGR01167 BBPR_1823 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025246 Transposase IS30-like HTH domain PF13936|PTHR10948 BBPR_1824 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540 BBPR_1826 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000719|IPR008271|IPR011009|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00107|PS00108|PTHR24362|SM00220|SSF56112 BBPR_1827 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|SSF52833 BBPR_1828 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR007137|IPR011098 G5 domain|Resuscitation-promoting factor, domain of unknown function DUF348 PF03990|PF07501|SM01208 BBPR_1829 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|PTHR11727|PTHR11727:SF7|SM00650|SSF53335|TIGR00755 BBPR_1830 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|PTHR20861|PTHR20861:SF2|SSF54211|SSF55060 BBPR_1831 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain PF13399 BBPR_1832 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR002646|IPR003607|IPR006674|IPR006675|IPR014065|IPR032828 HD domain|HD/PDEase domain|HDIG domain|Poly A polymerase, head domain|tRNA adenylyltransferase|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|PF01966|PF12627|PTHR13734|PTHR13734:SF5|SM00471|SSF81301|SSF81891|TIGR00277|TIGR02692 BBPR_1833 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR22769|PTHR22769:SF37|SSF55811 BBPR_1835 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR004268|IPR011009 Peptidoglycan biosynthesis protein MurJ|Protein kinase-like domain PF03023|PR01806|PTHR11206|PTHR11206:SF90|SSF56112 BBPR_1836 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000103|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905 BBPR_1837 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:3.90.1530.10|PF02195|PTHR33375|PTHR33375:SF3|SM00470|SSF109709|SSF110849|TIGR00180 BBPR_1838 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 BBPR_1839 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|PTHR31760|PTHR31760:SF0|SSF53335|TIGR00138 BBPR_1840 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001374 R3H domain GO:0003676 G3DSA:3.30.1370.50|G3DSA:3.30.300.120|PF01424|PTHR20953|PTHR20953:SF0|SM00393|SSF82708 BBPR_1841 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR001708|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 PF02096|PTHR12428|TIGR03592 BBPR_1842 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000100|IPR014721|IPR020568 Ribonuclease P|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PF00825|PTHR33992|SSF54211|TIGR00188 BBPR_1843 /var/genomes/g2d_mirror/Bifidobacterium_bifidum_PRL2010/ASM16590v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|PTHR14503|TIGR01030