HMPREF9228_RS00205 c5207ce18b77023134612c91cd9d56a2 240 Gene3D G3DSA:3.40.50.300 2 189 9.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00205 c5207ce18b77023134612c91cd9d56a2 240 SUPERFAMILY SSF52540 2 187 1.02E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00205 c5207ce18b77023134612c91cd9d56a2 240 Pfam PF00005 ABC transporter 2 116 6.2E-13 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS00205 c5207ce18b77023134612c91cd9d56a2 240 PANTHER PTHR24220 2 200 8.7E-91 T 22-04-2016 HMPREF9228_RS00205 c5207ce18b77023134612c91cd9d56a2 240 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 167 208 4.2E-9 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS00205 c5207ce18b77023134612c91cd9d56a2 240 PANTHER PTHR24220:SF336 2 200 8.7E-91 T 22-04-2016 HMPREF9228_RS00205 c5207ce18b77023134612c91cd9d56a2 240 ProSitePatterns PS00211 ABC transporters family signature. 88 102 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 PANTHER PTHR11731 818 956 1.0E-69 T 22-04-2016 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 PANTHER PTHR11731 261 492 1.0E-69 T 22-04-2016 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 PANTHER PTHR11731 597 770 1.0E-69 T 22-04-2016 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 SUPERFAMILY SSF53474 812 955 1.8E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 SUPERFAMILY SSF53474 669 774 1.8E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 Gene3D G3DSA:2.140.10.30 27 187 7.0E-48 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 Gene3D G3DSA:2.140.10.30 227 394 7.0E-48 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 Gene3D G3DSA:2.140.10.30 448 513 7.0E-48 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 Pfam PF00326 Prolyl oligopeptidase family 817 952 7.5E-25 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 Pfam PF00326 Prolyl oligopeptidase family 719 774 1.9E-11 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 255 409 1.4E-18 T 22-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 SUPERFAMILY SSF82171 100 192 5.62E-15 T 22-04-2016 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 SUPERFAMILY SSF82171 255 382 5.62E-15 T 22-04-2016 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 SUPERFAMILY SSF82171 447 511 5.62E-15 T 22-04-2016 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 Gene3D G3DSA:3.40.50.1820 818 955 7.2E-77 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 Gene3D G3DSA:3.40.50.1820 669 779 7.2E-77 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 PANTHER PTHR11731:SF110 818 956 1.0E-69 T 22-04-2016 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 PANTHER PTHR11731:SF110 261 492 1.0E-69 T 22-04-2016 HMPREF9228_RS00345 fa95baf6382f59abc11a15658c850593 956 PANTHER PTHR11731:SF110 597 770 1.0E-69 T 22-04-2016 HMPREF9228_RS08020 434f43fe872934efba5f4ee58816490e 161 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 101 2.0E-45 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 HMPREF9228_RS08020 434f43fe872934efba5f4ee58816490e 161 Gene3D G3DSA:3.30.300.20 5 122 4.3E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta HMPREF9228_RS08020 434f43fe872934efba5f4ee58816490e 161 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 121 18.374 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 HMPREF9228_RS08020 434f43fe872934efba5f4ee58816490e 161 PANTHER PTHR33515 1 156 6.8E-35 T 22-04-2016 HMPREF9228_RS08020 434f43fe872934efba5f4ee58816490e 161 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 115 3.9E-22 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 HMPREF9228_RS08020 434f43fe872934efba5f4ee58816490e 161 SUPERFAMILY SSF89919 3 115 1.96E-28 T 22-04-2016 IPR023799 Ribosome-binding factor A domain HMPREF9228_RS08020 434f43fe872934efba5f4ee58816490e 161 Pfam PF02033 Ribosome-binding factor A 7 114 1.4E-25 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 HMPREF9228_RS08020 434f43fe872934efba5f4ee58816490e 161 ProSitePatterns PS01319 Ribosome-binding factor A signature. 80 101 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 HMPREF9228_RS06570 d937a5911d3a513e2d7fe28f3f541469 340 PANTHER PTHR10314 1 323 4.1E-162 T 22-04-2016 HMPREF9228_RS06570 d937a5911d3a513e2d7fe28f3f541469 340 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 301 1.2E-66 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HMPREF9228_RS06570 d937a5911d3a513e2d7fe28f3f541469 340 Gene3D G3DSA:3.40.50.1100 155 320 2.3E-65 T 22-04-2016 HMPREF9228_RS06570 d937a5911d3a513e2d7fe28f3f541469 340 Gene3D G3DSA:3.40.50.1100 2 44 2.3E-65 T 22-04-2016 HMPREF9228_RS06570 d937a5911d3a513e2d7fe28f3f541469 340 SUPERFAMILY SSF53686 3 322 2.36E-90 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HMPREF9228_RS06570 d937a5911d3a513e2d7fe28f3f541469 340 Gene3D G3DSA:3.40.50.1100 45 149 6.8E-37 T 22-04-2016 HMPREF9228_RS06570 d937a5911d3a513e2d7fe28f3f541469 340 PANTHER PTHR10314:SF104 1 323 4.1E-162 T 22-04-2016 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 SMART SM01086 775 865 6.5E-37 T 22-04-2016 IPR019489 Clp ATPase, C-terminal HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 642 660 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Gene3D G3DSA:1.10.8.60 786 861 2.1E-31 T 22-04-2016 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 PANTHER PTHR11638 1 517 0.0 T 22-04-2016 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 PANTHER PTHR11638 537 885 0.0 T 22-04-2016 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 SMART SM00382 608 776 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 SMART SM00382 199 344 8.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 337 1.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Gene3D G3DSA:1.10.8.60 344 428 2.5E-36 T 22-04-2016 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Gene3D G3DSA:1.10.1780.10 1 148 7.7E-41 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Gene3D G3DSA:3.40.50.300 563 785 2.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 5 861 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 SUPERFAMILY SSF81923 4 157 1.37E-34 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 PANTHER PTHR11638:SF120 1 517 0.0 T 22-04-2016 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 PANTHER PTHR11638:SF120 537 885 0.0 T 22-04-2016 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Gene3D G3DSA:3.40.50.300 160 343 2.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 775 855 5.6E-27 T 22-04-2016 IPR019489 Clp ATPase, C-terminal HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 719 733 3.3E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 630 3.3E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 686 704 3.3E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 675 3.3E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 146 6.6E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 63 2.0E-6 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 SUPERFAMILY SSF52540 557 857 2.61E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 Pfam PF07724 AAA domain (Cdc48 subfamily) 607 769 1.9E-53 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 SUPERFAMILY SSF52540 158 523 3.55E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08980 11f6635f319084b0d959148d30d191d4 889 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 PANTHER PTHR11236:SF9 16 515 8.6E-208 T 22-04-2016 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 PRINTS PR00095 Anthranilate synthase component I signature 349 362 7.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 PRINTS PR00095 Anthranilate synthase component I signature 363 376 7.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 PRINTS PR00095 Anthranilate synthase component I signature 443 457 7.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 PRINTS PR00095 Anthranilate synthase component I signature 458 472 7.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 SUPERFAMILY SSF56322 29 511 1.57E-145 T 22-04-2016 IPR005801 ADC synthase GO:0009058 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 40 509 1.9E-158 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 Gene3D G3DSA:3.60.120.10 29 514 3.0E-160 T 22-04-2016 IPR005801 ADC synthase GO:0009058 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 Pfam PF04715 Anthranilate synthase component I, N terminal region 41 183 3.1E-22 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 Pfam PF00425 chorismate binding enzyme 243 501 1.3E-96 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal HMPREF9228_RS03770 d4b83393fa99f2035f30392ad822b4c9 518 PANTHER PTHR11236 16 515 8.6E-208 T 22-04-2016 HMPREF9228_RS04380 ce95d5b42bc063a27a9069fa1b898981 211 PANTHER PTHR41878 1 211 5.2E-23 T 22-04-2016 HMPREF9228_RS04380 ce95d5b42bc063a27a9069fa1b898981 211 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 8 192 6.4E-45 T 22-04-2016 IPR012912 Plasmid pRiA4b, Orf3 HMPREF9228_RS04380 ce95d5b42bc063a27a9069fa1b898981 211 Gene3D G3DSA:3.10.290.30 5 186 2.4E-45 T 22-04-2016 IPR024047 Protein MM3350-like domain HMPREF9228_RS04380 ce95d5b42bc063a27a9069fa1b898981 211 PANTHER PTHR41878:SF1 1 211 5.2E-23 T 22-04-2016 HMPREF9228_RS04380 ce95d5b42bc063a27a9069fa1b898981 211 SUPERFAMILY SSF159941 7 185 9.02E-41 T 22-04-2016 IPR024047 Protein MM3350-like domain HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Gene3D G3DSA:2.10.230.10 137 208 8.6E-19 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 379 35.054 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 SUPERFAMILY SSF57938 129 209 6.54E-17 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 PANTHER PTHR24078:SF190 3 349 3.3E-126 T 22-04-2016 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Pfam PF00684 DnaJ central domain 142 206 8.9E-13 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 PRINTS PR00625 DnaJ domain signature 38 58 9.0E-16 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 PRINTS PR00625 DnaJ domain signature 5 23 9.0E-16 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 PRINTS PR00625 DnaJ domain signature 58 77 9.0E-16 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Pfam PF00226 DnaJ domain 3 63 4.9E-24 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 SMART SM00271 2 58 5.4E-24 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 SUPERFAMILY SSF46565 2 102 1.57E-32 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Gene3D G3DSA:1.10.287.110 3 98 5.9E-32 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 43 62 - T 22-04-2016 IPR018253 DnaJ domain, conserved site HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 SUPERFAMILY SSF49493 109 164 2.88E-14 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 SUPERFAMILY SSF49493 212 266 2.88E-14 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Gene3D G3DSA:2.60.260.20 209 253 1.4E-13 T 22-04-2016 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Gene3D G3DSA:2.60.260.20 104 136 1.4E-13 T 22-04-2016 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 SUPERFAMILY SSF49493 258 344 1.15E-16 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Pfam PF01556 DnaJ C terminal domain 119 333 1.8E-30 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 Gene3D G3DSA:2.60.260.20 256 334 3.6E-16 T 22-04-2016 HMPREF9228_RS04125 ac77a9f55fbc69c75efd9bdeda5f6e9e 381 PANTHER PTHR24078 3 349 3.3E-126 T 22-04-2016 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 SMART SM00825 Beta-ketoacyl synthase 7 455 5.7E-24 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 482 671 1.1E-7 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 276 2.7E-33 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 SUPERFAMILY SSF53901 3 124 8.6E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 SUPERFAMILY SSF53901 175 394 8.6E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 SUPERFAMILY SSF53901 430 451 8.6E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 SUPERFAMILY SSF53901 493 548 8.23E-11 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 SUPERFAMILY SSF53901 577 659 8.23E-11 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 PANTHER PTHR11712 5 131 2.0E-69 T 22-04-2016 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 PANTHER PTHR11712 709 729 2.0E-69 T 22-04-2016 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 PANTHER PTHR11712 155 472 2.0E-69 T 22-04-2016 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 Gene3D G3DSA:3.40.47.10 292 454 4.5E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 287 400 7.1E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 PANTHER PTHR11712:SF285 5 131 2.0E-69 T 22-04-2016 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 PANTHER PTHR11712:SF285 709 729 2.0E-69 T 22-04-2016 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 PANTHER PTHR11712:SF285 155 472 2.0E-69 T 22-04-2016 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 Gene3D G3DSA:3.40.47.10 492 674 2.5E-11 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS01045 b9f36fd87674581566bf361b21908181 842 Gene3D G3DSA:3.40.47.10 7 291 1.9E-40 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS07590 7c20e9dedfc84c2867a2f20a0b185a46 172 PANTHER PTHR23091 5 159 1.4E-17 T 22-04-2016 HMPREF9228_RS07590 7c20e9dedfc84c2867a2f20a0b185a46 172 Pfam PF00583 Acetyltransferase (GNAT) family 93 155 5.1E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS07590 7c20e9dedfc84c2867a2f20a0b185a46 172 SUPERFAMILY SSF55729 5 160 2.4E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS07590 7c20e9dedfc84c2867a2f20a0b185a46 172 Gene3D G3DSA:3.40.630.30 8 160 2.5E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 213 5.1E-88 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 Gene3D G3DSA:3.30.1140.32 114 210 1.5E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 SMART SM00322 64 129 3.2E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 210 36.915 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 PANTHER PTHR11760:SF19 2 246 4.7E-115 T 22-04-2016 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 Gene3D G3DSA:3.30.300.20 17 111 2.1E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 Pfam PF07650 KH domain 43 113 2.0E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 ProSitePatterns PS00548 Ribosomal protein S3 signature. 167 201 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 SUPERFAMILY SSF54814 2 110 1.18E-32 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 Pfam PF00189 Ribosomal protein S3, C-terminal domain 124 206 1.1E-36 T 22-04-2016 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 SUPERFAMILY SSF54821 111 210 1.96E-36 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08165 43bce26d44cbb1c3ed1e81ecc0ba60dd 266 PANTHER PTHR11760 2 246 4.7E-115 T 22-04-2016 HMPREF9228_RS06385 9b260ef7a25e4cc45cd8eabcb88218f2 166 PANTHER PTHR33202 7 134 4.9E-32 T 22-04-2016 HMPREF9228_RS06385 9b260ef7a25e4cc45cd8eabcb88218f2 166 PANTHER PTHR33202:SF5 7 134 4.9E-32 T 22-04-2016 HMPREF9228_RS06385 9b260ef7a25e4cc45cd8eabcb88218f2 166 Gene3D G3DSA:1.10.10.10 10 76 2.2E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06385 9b260ef7a25e4cc45cd8eabcb88218f2 166 Pfam PF01475 Ferric uptake regulator family 11 125 4.4E-27 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 HMPREF9228_RS06385 9b260ef7a25e4cc45cd8eabcb88218f2 166 SUPERFAMILY SSF46785 9 130 1.04E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 Pfam PF01546 Peptidase family M20/M25/M40 71 375 2.3E-31 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 PIRSF PIRSF005962 2 383 2.4E-104 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 Gene3D G3DSA:3.30.70.360 178 294 1.9E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 Gene3D G3DSA:3.40.630.10 7 175 1.1E-81 T 22-04-2016 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 Gene3D G3DSA:3.40.630.10 295 381 1.1E-81 T 22-04-2016 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 PANTHER PTHR11014:SF63 6 383 3.0E-117 T 22-04-2016 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 SUPERFAMILY SSF55031 179 288 1.09E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 11 358 8.2E-98 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 SUPERFAMILY SSF53187 295 380 6.29E-70 T 22-04-2016 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 SUPERFAMILY SSF53187 7 194 6.29E-70 T 22-04-2016 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 PANTHER PTHR11014 6 383 3.0E-117 T 22-04-2016 HMPREF9228_RS05155 495c766abbfaaa31525e569036b6c1ba 383 Pfam PF07687 Peptidase dimerisation domain 179 280 3.4E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 Gene3D G3DSA:3.90.400.10 123 198 1.8E-27 T 22-04-2016 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 Pfam PF00128 Alpha amylase, catalytic domain 46 415 2.0E-116 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 SMART SM00642 31 459 1.9E-154 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 PANTHER PTHR10357 21 243 1.4E-209 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 PANTHER PTHR10357 500 555 1.4E-209 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 PANTHER PTHR10357 452 464 1.4E-209 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 PANTHER PTHR10357 265 434 1.4E-209 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 Gene3D G3DSA:3.20.20.80 199 521 2.4E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 Gene3D G3DSA:3.20.20.80 20 122 2.4E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 SUPERFAMILY SSF51011 524 599 1.86E-9 T 22-04-2016 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 PANTHER PTHR10357:SF142 21 243 1.4E-209 T 22-04-2016 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 PANTHER PTHR10357:SF142 500 555 1.4E-209 T 22-04-2016 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 PANTHER PTHR10357:SF142 452 464 1.4E-209 T 22-04-2016 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 PANTHER PTHR10357:SF142 265 434 1.4E-209 T 22-04-2016 HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 Gene3D G3DSA:2.60.40.1180 525 599 1.2E-10 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 SUPERFAMILY SSF51445 21 520 1.3E-149 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS06470 ab972339ee5fb8f4a2d02fefd55f858b 604 Pfam PF11941 Domain of unknown function (DUF3459) 507 597 9.6E-10 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 289 392 5.1E-15 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 59 194 1.7E-24 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 23 539 33.698 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 Gene3D G3DSA:3.20.20.10 48 186 4.2E-90 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 Gene3D G3DSA:3.20.20.10 276 382 4.2E-90 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 PANTHER PTHR11482 256 263 4.4E-93 T 22-04-2016 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 PANTHER PTHR11482 283 540 4.4E-93 T 22-04-2016 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 PANTHER PTHR11482 14 184 4.4E-93 T 22-04-2016 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 416 515 5.2E-14 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 SUPERFAMILY SSF51419 282 394 6.35E-20 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 SUPERFAMILY SSF51419 34 188 6.54E-36 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 SUPERFAMILY SSF50621 373 538 5.23E-45 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 69 87 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 Gene3D G3DSA:2.40.37.10 383 538 6.7E-45 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 PANTHER PTHR11482:SF5 256 263 4.4E-93 T 22-04-2016 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 PANTHER PTHR11482:SF5 283 540 4.4E-93 T 22-04-2016 HMPREF9228_RS08850 81ccd21557f15a1325137071d00ceb58 540 PANTHER PTHR11482:SF5 14 184 4.4E-93 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 SUPERFAMILY SSF100934 513 587 1.61E-5 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Gene3D G3DSA:3.30.420.40 101 166 5.8E-58 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Gene3D G3DSA:3.30.420.40 4 38 5.8E-58 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 315 329 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Gene3D G3DSA:1.20.1270.10 512 582 1.7E-22 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Gene3D G3DSA:3.30.420.40 297 339 8.3E-32 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Gene3D G3DSA:3.30.420.40 167 206 8.3E-32 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Gene3D G3DSA:3.30.30.30 39 100 4.8E-16 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PANTHER PTHR19375:SF173 2 626 0.0 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Gene3D G3DSA:2.60.34.10 369 511 2.6E-73 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 367 386 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 312 328 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 174 184 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 448 464 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 114 134 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PRINTS PR00301 70kDa heat shock protein signature 344 364 2.2E-76 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 582 7.2E-277 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 SUPERFAMILY SSF53067 163 360 5.87E-58 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 619 35.483 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 PANTHER PTHR19375 2 626 0.0 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Pfam PF00012 Hsp70 protein 80 582 5.2E-209 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Pfam PF00012 Hsp70 protein 4 78 5.7E-28 T 22-04-2016 IPR013126 Heat shock protein 70 family HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 SUPERFAMILY SSF100920 363 519 7.46E-62 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 Gene3D G3DSA:3.90.640.10 207 291 3.6E-28 T 22-04-2016 HMPREF9228_RS00595 b935d8b138ccc55e55101a717b115888 626 SUPERFAMILY SSF53067 3 159 4.1E-57 T 22-04-2016 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 Gene3D G3DSA:3.40.50.300 17 147 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 Gene3D G3DSA:3.40.50.300 245 371 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 Gene3D G3DSA:3.40.50.300 409 657 4.3E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 Pfam PF00005 ABC transporter 41 297 4.9E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 Pfam PF00005 ABC transporter 433 583 1.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 635 660 0.0054 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 348 391 6.4E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 PANTHER PTHR24220 240 375 1.4E-141 T 22-04-2016 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 PANTHER PTHR24220 400 542 1.4E-141 T 22-04-2016 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 PANTHER PTHR24220 21 140 1.4E-141 T 22-04-2016 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 SUPERFAMILY SSF52540 410 655 3.62E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 SUPERFAMILY SSF52540 13 119 1.04E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 SUPERFAMILY SSF52540 238 377 1.04E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 ProSitePatterns PS00211 ABC transporters family signature. 556 570 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 ProSitePatterns PS00211 ABC transporters family signature. 269 283 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 SMART SM00382 441 633 3.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 SMART SM00382 49 346 4.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 PANTHER PTHR24220:SF518 240 375 1.4E-141 T 22-04-2016 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 PANTHER PTHR24220:SF518 400 542 1.4E-141 T 22-04-2016 HMPREF9228_RS03245 63290988351c86a2c1a3a0a955709db7 669 PANTHER PTHR24220:SF518 21 140 1.4E-141 T 22-04-2016 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 ProSitePatterns PS01054 Transaldolase signature 1. 41 49 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 SUPERFAMILY SSF51569 10 359 6.11E-75 T 22-04-2016 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 PANTHER PTHR10683:SF12 1 366 6.3E-168 T 22-04-2016 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 TIGRFAM TIGR00876 tal_mycobact: transaldolase 12 356 2.4E-119 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 Gene3D G3DSA:3.20.20.70 2 356 5.1E-114 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 Hamap MF_00493 Transaldolase [tal]. 1 367 146.326 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 PIRSF PIRSF036915 1 367 1.3E-152 T 22-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 Pfam PF00923 Transaldolase 15 356 1.8E-81 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS04140 8a745e9b343d3f78d1096f4146258284 367 PANTHER PTHR10683 1 366 6.3E-168 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS06700 1464082c99a179d47a422d52c77974c7 217 Hamap MF_00163 Peptide deformylase [def]. 27 199 23.293 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS06700 1464082c99a179d47a422d52c77974c7 217 PRINTS PR01576 Peptide deformylase signature 60 89 5.54E-23 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS06700 1464082c99a179d47a422d52c77974c7 217 PRINTS PR01576 Peptide deformylase signature 127 138 5.54E-23 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS06700 1464082c99a179d47a422d52c77974c7 217 PRINTS PR01576 Peptide deformylase signature 158 187 5.54E-23 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS06700 1464082c99a179d47a422d52c77974c7 217 Pfam PF01327 Polypeptide deformylase 29 186 2.2E-43 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS06700 1464082c99a179d47a422d52c77974c7 217 PANTHER PTHR10458 14 190 2.7E-48 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS06700 1464082c99a179d47a422d52c77974c7 217 Gene3D G3DSA:3.90.45.10 27 188 6.9E-50 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS06700 1464082c99a179d47a422d52c77974c7 217 SUPERFAMILY SSF56420 26 186 8.24E-47 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS05715 ea480e9b95fbd660314f905914c1566f 391 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 2 390 1.2E-102 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 HMPREF9228_RS05715 ea480e9b95fbd660314f905914c1566f 391 PANTHER PTHR23100:SF0 2 391 1.4E-146 T 22-04-2016 HMPREF9228_RS05715 ea480e9b95fbd660314f905914c1566f 391 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 389 0.0 T 22-04-2016 HMPREF9228_RS05715 ea480e9b95fbd660314f905914c1566f 391 SUPERFAMILY SSF56266 6 388 1.44E-119 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 HMPREF9228_RS05715 ea480e9b95fbd660314f905914c1566f 391 PANTHER PTHR23100 2 391 1.4E-146 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 HMPREF9228_RS05715 ea480e9b95fbd660314f905914c1566f 391 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 391 127.377 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 HMPREF9228_RS05715 ea480e9b95fbd660314f905914c1566f 391 Pfam PF01960 ArgJ family 11 391 1.4E-127 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 HMPREF9228_RS05715 ea480e9b95fbd660314f905914c1566f 391 Gene3D G3DSA:3.60.70.12 2 263 2.4E-92 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 Gene3D G3DSA:3.10.20.70 7 109 2.2E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 PANTHER PTHR20852 8 142 1.2E-230 T 22-04-2016 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 PANTHER PTHR20852 168 478 1.2E-230 T 22-04-2016 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 266 281 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 476 9.4E-193 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 Gene3D G3DSA:3.30.590.10 110 463 1.5E-131 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 99 1.2E-26 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 SMART SM01230 106 388 1.0E-142 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 SUPERFAMILY SSF55931 107 477 5.3E-133 T 22-04-2016 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 ProSitePatterns PS00180 Glutamine synthetase signature 1. 54 72 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 PANTHER PTHR20852:SF15 8 142 1.2E-230 T 22-04-2016 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 PANTHER PTHR20852:SF15 168 478 1.2E-230 T 22-04-2016 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 SUPERFAMILY SSF54368 7 105 3.4E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS05780 0e6efa89b1d7ca78c11e1d70bb98754d 478 Pfam PF00120 Glutamine synthetase, catalytic domain 107 475 2.9E-131 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS05265 18b46c1bc8b30f09f9b2410e98abfa93 50 PANTHER PTHR30037:SF4 2 50 2.8E-16 T 22-04-2016 HMPREF9228_RS05265 18b46c1bc8b30f09f9b2410e98abfa93 50 SUPERFAMILY SSF48150 2 48 5.96E-12 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS05265 18b46c1bc8b30f09f9b2410e98abfa93 50 Pfam PF03352 Methyladenine glycosylase 2 46 1.3E-15 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 HMPREF9228_RS05265 18b46c1bc8b30f09f9b2410e98abfa93 50 Gene3D G3DSA:1.10.340.30 2 47 3.8E-13 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS05265 18b46c1bc8b30f09f9b2410e98abfa93 50 PANTHER PTHR30037 2 50 2.8E-16 T 22-04-2016 HMPREF9228_RS05550 473ffdafeb3b343042e23e3408188f70 237 Pfam PF13346 ABC-2 family transporter protein 59 232 1.2E-11 T 22-04-2016 IPR025699 ABC-2 membrane transporter-like HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 3.8E-90 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 Hamap MF_00600 60 kDa chaperonin [groL]. 1 541 39.464 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 PRINTS PR00298 60kDa chaperonin signature 26 52 1.2E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 PRINTS PR00298 60kDa chaperonin signature 82 109 1.2E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 PRINTS PR00298 60kDa chaperonin signature 266 289 1.2E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 PRINTS PR00298 60kDa chaperonin signature 396 417 1.2E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 PRINTS PR00298 60kDa chaperonin signature 348 373 1.2E-70 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 SUPERFAMILY SSF54849 137 202 1.17E-22 T 22-04-2016 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 8.7E-238 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 Gene3D G3DSA:1.10.560.10 367 519 7.6E-34 T 22-04-2016 IPR027413 GroEL-like equatorial domain HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 Gene3D G3DSA:3.50.7.10 172 366 1.5E-94 T 22-04-2016 IPR027409 GroEL-like apical domain HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 SUPERFAMILY SSF48592 6 133 6.0E-70 T 22-04-2016 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 SUPERFAMILY SSF48592 404 522 6.0E-70 T 22-04-2016 HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 SUPERFAMILY SSF52029 185 374 8.82E-80 T 22-04-2016 IPR027409 GroEL-like apical domain HMPREF9228_RS02445 f5120ba9fd8be172dc5db2dc7233cfe2 541 PANTHER PTHR11353 1 540 4.0E-202 T 22-04-2016 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 Gene3D G3DSA:3.40.50.10490 11 102 6.8E-128 T 22-04-2016 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 Gene3D G3DSA:3.40.50.10490 312 521 6.8E-128 T 22-04-2016 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 Pfam PF00342 Phosphoglucose isomerase 56 557 8.0E-198 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 50 539 39.525 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 284 297 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 PRINTS PR00662 Glucose-6-phosphate isomerase signature 156 175 9.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 PRINTS PR00662 Glucose-6-phosphate isomerase signature 357 378 9.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 PRINTS PR00662 Glucose-6-phosphate isomerase signature 480 498 9.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 512 9.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 PRINTS PR00662 Glucose-6-phosphate isomerase signature 512 525 9.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 PRINTS PR00662 Glucose-6-phosphate isomerase signature 280 298 9.2E-53 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 SUPERFAMILY SSF53697 8 564 2.72E-193 T 22-04-2016 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 Gene3D G3DSA:1.10.1390.10 522 564 1.3E-17 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 512 529 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 Gene3D G3DSA:3.40.50.10490 103 309 7.7E-80 T 22-04-2016 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 PANTHER PTHR11469 1 566 9.7E-277 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS02030 7d4fe7bf70c147f015f85bc3708411c2 566 PANTHER PTHR11469:SF4 1 566 9.7E-277 T 22-04-2016 HMPREF9228_RS01935 a66f2f6991125ca256ac35bbdd33e2d2 140 SUPERFAMILY SSF88723 1 136 1.23E-28 T 22-04-2016 IPR029060 PIN domain-like HMPREF9228_RS01935 a66f2f6991125ca256ac35bbdd33e2d2 140 PANTHER PTHR33653 1 138 5.5E-28 T 22-04-2016 HMPREF9228_RS01935 a66f2f6991125ca256ac35bbdd33e2d2 140 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 135 10.198 T 22-04-2016 IPR022907 VapC family GO:0004540 HMPREF9228_RS01935 a66f2f6991125ca256ac35bbdd33e2d2 140 PANTHER PTHR33653:SF1 1 138 5.5E-28 T 22-04-2016 HMPREF9228_RS01935 a66f2f6991125ca256ac35bbdd33e2d2 140 Pfam PF01850 PIN domain 2 123 2.1E-14 T 22-04-2016 IPR002716 PIN domain HMPREF9228_RS01935 a66f2f6991125ca256ac35bbdd33e2d2 140 Gene3D G3DSA:3.40.50.1010 1 133 8.4E-21 T 22-04-2016 IPR029060 PIN domain-like HMPREF9228_RS06980 6a6a65297819cde28a74ddbce977c883 96 SUPERFAMILY SSF143430 1 86 6.02E-24 T 22-04-2016 HMPREF9228_RS06980 6a6a65297819cde28a74ddbce977c883 96 PANTHER PTHR34405 1 96 2.6E-20 T 22-04-2016 HMPREF9228_RS06980 6a6a65297819cde28a74ddbce977c883 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 88 3.1E-17 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 HMPREF9228_RS06980 6a6a65297819cde28a74ddbce977c883 96 Pfam PF09827 CRISPR associated protein Cas2 1 78 2.7E-22 T 22-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 HMPREF9228_RS06980 6a6a65297819cde28a74ddbce977c883 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 94 14.398 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 HMPREF9228_RS06980 6a6a65297819cde28a74ddbce977c883 96 PIRSF PIRSF032582 1 96 2.0E-36 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 HMPREF9228_RS06980 6a6a65297819cde28a74ddbce977c883 96 Gene3D G3DSA:3.30.70.240 1 72 2.2E-27 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS06980 6a6a65297819cde28a74ddbce977c883 96 PANTHER PTHR34405:SF1 1 96 2.6E-20 T 22-04-2016 HMPREF9228_RS00865 6d090b68a8b917d9949d4da42d9bb1e6 270 PANTHER PTHR11280 4 254 7.2E-110 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS00865 6d090b68a8b917d9949d4da42d9bb1e6 270 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 4 255 9.3E-75 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS00865 6d090b68a8b917d9949d4da42d9bb1e6 270 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 129 147 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS00865 6d090b68a8b917d9949d4da42d9bb1e6 270 Gene3D G3DSA:3.40.50.1360 3 267 1.9E-90 T 22-04-2016 HMPREF9228_RS00865 6d090b68a8b917d9949d4da42d9bb1e6 270 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 234 1.6E-20 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 HMPREF9228_RS00865 6d090b68a8b917d9949d4da42d9bb1e6 270 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 2 251 39.951 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS00865 6d090b68a8b917d9949d4da42d9bb1e6 270 SUPERFAMILY SSF100950 3 260 1.17E-86 T 22-04-2016 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 Gene3D G3DSA:1.10.240.10 244 327 4.8E-39 T 22-04-2016 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 13 439 42.2 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 PANTHER PTHR11766 13 432 1.5E-192 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 14 436 4.6E-113 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 Gene3D G3DSA:3.40.50.620 4 243 5.5E-93 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 55 77 3.2E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 194 216 3.2E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 173 188 3.2E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 227 239 3.2E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 SUPERFAMILY SSF52374 14 334 1.82E-95 T 22-04-2016 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 SUPERFAMILY SSF55174 353 434 1.96E-14 T 22-04-2016 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 Pfam PF01479 S4 domain 381 414 3.6E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 Gene3D G3DSA:3.10.290.10 328 438 1.1E-27 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 61 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 Pfam PF00579 tRNA synthetases class I (W and Y) 40 334 2.7E-78 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS05615 f4256f9f2162071d845d0fdabc818910 440 PANTHER PTHR11766:SF0 13 432 1.5E-192 T 22-04-2016 HMPREF9228_RS05925 4fd24ed11a11006619eca58a7bb8c0e0 385 Pfam PF13635 Domain of unknown function (DUF4143) 174 334 5.0E-26 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 HMPREF9228_RS05925 4fd24ed11a11006619eca58a7bb8c0e0 385 PANTHER PTHR33295:SF5 11 345 3.5E-84 T 22-04-2016 HMPREF9228_RS05925 4fd24ed11a11006619eca58a7bb8c0e0 385 PANTHER PTHR33295 11 345 3.5E-84 T 22-04-2016 HMPREF9228_RS05925 4fd24ed11a11006619eca58a7bb8c0e0 385 Gene3D G3DSA:3.40.50.300 18 127 2.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05925 4fd24ed11a11006619eca58a7bb8c0e0 385 Pfam PF13173 AAA domain 18 133 7.0E-22 T 22-04-2016 HMPREF9228_RS05925 4fd24ed11a11006619eca58a7bb8c0e0 385 SUPERFAMILY SSF52540 19 137 1.91E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 55.547 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 SUPERFAMILY SSF52304 3 147 5.36E-50 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 PIRSF PIRSF001399 1 148 2.1E-55 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 Gene3D G3DSA:3.40.50.9100 3 147 1.4E-53 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 144 1.9E-51 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 Pfam PF01220 Dehydroquinase class II 3 142 1.5E-47 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 PANTHER PTHR21272 1 148 3.1E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 143 5.0E-77 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS04615 b6394d296e79088b18d6fa7211ae3d16 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 Pfam PF13481 AAA domain 91 258 5.1E-12 T 22-04-2016 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 SMART SM00382 100 280 2.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 PRINTS PR01874 DNA repair protein radA signature 284 310 4.0E-60 T 22-04-2016 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 PRINTS PR01874 DNA repair protein radA signature 249 277 4.0E-60 T 22-04-2016 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 PRINTS PR01874 DNA repair protein radA signature 92 120 4.0E-60 T 22-04-2016 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 PRINTS PR01874 DNA repair protein radA signature 210 234 4.0E-60 T 22-04-2016 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 PRINTS PR01874 DNA repair protein radA signature 10 34 4.0E-60 T 22-04-2016 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 Gene3D G3DSA:3.30.230.10 330 495 8.0E-25 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 394 470 7.9E-6 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 PANTHER PTHR32472:SF10 1 469 9.8E-159 T 22-04-2016 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 SUPERFAMILY SSF52540 155 323 1.08E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 SUPERFAMILY SSF52540 78 128 1.08E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 PANTHER PTHR32472 1 469 9.8E-159 T 22-04-2016 HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 SUPERFAMILY SSF54211 345 495 7.21E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 SUPERFAMILY SSF54211 291 305 7.21E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS08005 051604303aaa07c4c5fe9f47113164a3 499 Gene3D G3DSA:3.40.50.300 71 313 2.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 PANTHER PTHR22939:SF79 298 627 9.2E-100 T 22-04-2016 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 SUPERFAMILY SSF50156 487 599 6.7E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 Gene3D G3DSA:2.40.10.10 393 509 3.5E-42 T 22-04-2016 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 SUPERFAMILY SSF50494 289 512 3.47E-57 T 22-04-2016 IPR009003 Peptidase S1, PA clan HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 Gene3D G3DSA:2.40.10.10 315 392 1.9E-29 T 22-04-2016 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 PRINTS PR00834 HtrA/DegQ protease family signature 548 560 8.7E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 PRINTS PR00834 HtrA/DegQ protease family signature 432 449 8.7E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 PRINTS PR00834 HtrA/DegQ protease family signature 329 341 8.7E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 PRINTS PR00834 HtrA/DegQ protease family signature 392 416 8.7E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 PRINTS PR00834 HtrA/DegQ protease family signature 454 471 8.7E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 PRINTS PR00834 HtrA/DegQ protease family signature 350 370 8.7E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 Gene3D G3DSA:2.30.42.10 537 604 5.0E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 Pfam PF13365 Trypsin-like peptidase domain 320 461 3.2E-32 T 22-04-2016 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 PANTHER PTHR22939 298 627 9.2E-100 T 22-04-2016 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 SMART SM00228 505 590 3.2E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 HMPREF9228_RS00430 2d43258e1c8b7c0d7bf485f08e7afee1 660 Pfam PF13180 PDZ domain 507 599 9.2E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 HMPREF9228_RS07430 deae34e0a4d417b38d2d5f5754220a1c 180 SUPERFAMILY SSF46785 56 173 6.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07430 deae34e0a4d417b38d2d5f5754220a1c 180 Gene3D G3DSA:1.10.10.10 51 176 2.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07430 deae34e0a4d417b38d2d5f5754220a1c 180 SMART SM00347 51 159 0.005 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07430 deae34e0a4d417b38d2d5f5754220a1c 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 149 169 6.3E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07430 deae34e0a4d417b38d2d5f5754220a1c 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 115 6.3E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07430 deae34e0a4d417b38d2d5f5754220a1c 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 135 6.3E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07430 deae34e0a4d417b38d2d5f5754220a1c 180 Pfam PF12802 MarR family 75 123 4.5E-7 T 22-04-2016 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 Pfam PF01979 Amidohydrolase family 79 398 2.7E-15 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 Gene3D G3DSA:2.30.40.10 22 88 2.9E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 PANTHER PTHR11113 6 413 1.5E-100 T 22-04-2016 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 SUPERFAMILY SSF51338 383 404 2.88E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 SUPERFAMILY SSF51338 21 83 2.88E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 Gene3D G3DSA:3.20.20.140 89 358 2.2E-93 T 22-04-2016 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 SUPERFAMILY SSF51556 83 372 1.73E-82 T 22-04-2016 IPR032466 Metal-dependent hydrolase HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 PIRSF PIRSF038994 25 414 7.0E-93 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 PANTHER PTHR11113:SF7 6 413 1.5E-100 T 22-04-2016 HMPREF9228_RS04880 afce98940b0457fa2839317f8bebc367 414 Gene3D G3DSA:2.30.40.10 359 413 1.4E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 Gene3D G3DSA:3.65.10.10 26 230 1.7E-58 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 SUPERFAMILY SSF55205 15 442 1.5E-88 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 16 437 4.3E-91 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 21 443 1.9E-95 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 ProSitePatterns PS00885 EPSP synthase signature 2. 355 373 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 16 444 24.422 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 PIRSF PIRSF000505 7 444 1.7E-98 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 PANTHER PTHR21090:SF5 15 443 1.2E-105 T 22-04-2016 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 PANTHER PTHR21090 15 443 1.2E-105 T 22-04-2016 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 ProSitePatterns PS00104 EPSP synthase signature 1. 96 110 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS05245 c1ce9a1d12b0bcb5fed2af5e36ef32e2 444 Gene3D G3DSA:3.65.10.10 239 441 9.4E-45 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 PANTHER PTHR30314 2 400 6.4E-154 T 22-04-2016 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 Gene3D G3DSA:3.40.50.1440 14 216 5.9E-81 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 174 2.6E-37 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 Gene3D G3DSA:3.30.1330.20 217 318 5.8E-42 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 PRINTS PR00423 Cell division protein FtsZ signature 99 119 1.4E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 PRINTS PR00423 Cell division protein FtsZ signature 190 212 1.4E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 PRINTS PR00423 Cell division protein FtsZ signature 213 234 1.4E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 PRINTS PR00423 Cell division protein FtsZ signature 127 148 1.4E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 SMART SM00865 208 325 1.2E-46 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 SUPERFAMILY SSF55307 206 317 3.43E-37 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 326 1.6E-114 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 Pfam PF12327 FtsZ family, C-terminal domain 223 317 2.9E-31 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 SMART SM00864 14 206 7.1E-90 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 SUPERFAMILY SSF52490 14 203 1.57E-59 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 353 35.716 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 HMPREF9228_RS02715 dc58fcc9e1d8b9cb7864e0e12f95886f 400 PANTHER PTHR30314:SF3 2 400 6.4E-154 T 22-04-2016 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 SMART SM00448 7 126 2.1E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 SMART SM00421 205 262 1.4E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 222 238 1.5E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 238 250 1.5E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 222 1.5E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 SUPERFAMILY SSF52172 6 143 1.42E-33 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 Gene3D G3DSA:3.40.50.2300 3 135 2.0E-39 T 22-04-2016 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 PANTHER PTHR26402:SF564 7 144 2.5E-94 T 22-04-2016 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 PANTHER PTHR26402:SF564 186 268 2.5E-94 T 22-04-2016 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 Gene3D G3DSA:1.10.10.10 136 148 2.8E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 Gene3D G3DSA:1.10.10.10 200 268 2.8E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 Pfam PF00072 Response regulator receiver domain 9 126 4.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 PANTHER PTHR26402 7 144 2.5E-94 T 22-04-2016 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 PANTHER PTHR26402 186 268 2.5E-94 T 22-04-2016 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 SUPERFAMILY SSF46894 199 268 9.18E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 ProSitePatterns PS00622 LuxR-type HTH domain signature. 222 249 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS05005 fb61ad2ba8161e8d80a3da70a305892e 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 207 262 4.4E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS01595 9418d3a4580a3aa990830b51406f9b62 97 PANTHER PTHR13822 2 85 9.5E-16 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01595 9418d3a4580a3aa990830b51406f9b62 97 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 13 82 9.0E-21 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01595 9418d3a4580a3aa990830b51406f9b62 97 Gene3D G3DSA:2.60.15.10 3 91 1.1E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01595 9418d3a4580a3aa990830b51406f9b62 97 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 8 86 2.5E-21 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01595 9418d3a4580a3aa990830b51406f9b62 97 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 7 86 1.6E-19 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01595 9418d3a4580a3aa990830b51406f9b62 97 SUPERFAMILY SSF51344 7 86 2.09E-20 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01485 1c5120d2ae27769f95babafcd26dab77 600 Pfam PF02065 Melibiase 186 330 2.8E-9 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS01485 1c5120d2ae27769f95babafcd26dab77 600 SUPERFAMILY SSF51445 180 489 1.24E-40 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS01485 1c5120d2ae27769f95babafcd26dab77 600 Gene3D G3DSA:3.20.20.70 187 400 3.7E-19 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 181 205 1.9E-10 T 22-04-2016 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 95 117 1.9E-10 T 22-04-2016 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 407 426 1.9E-10 T 22-04-2016 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 127 147 1.9E-10 T 22-04-2016 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 Gene3D G3DSA:1.20.1250.20 266 473 4.4E-17 T 22-04-2016 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 Gene3D G3DSA:1.20.1250.20 27 210 1.2E-12 T 22-04-2016 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 Pfam PF07690 Major Facilitator Superfamily 38 416 2.7E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 PANTHER PTHR23501 13 475 5.9E-45 T 22-04-2016 HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 SUPERFAMILY SSF103473 255 473 1.1E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS07060 b3a9745a21f594cd3a6d2049c13f83ee 481 SUPERFAMILY SSF103473 16 214 1.1E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS04850 303e774c79214df492fbc7f0c8fc4fe6 276 SMART SM00855 6 177 1.4E-15 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS04850 303e774c79214df492fbc7f0c8fc4fe6 276 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 9 18 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 HMPREF9228_RS04850 303e774c79214df492fbc7f0c8fc4fe6 276 Gene3D G3DSA:3.40.50.1240 3 212 3.6E-40 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS04850 303e774c79214df492fbc7f0c8fc4fe6 276 SUPERFAMILY SSF53254 3 214 2.36E-36 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS04850 303e774c79214df492fbc7f0c8fc4fe6 276 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 208 6.2E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS04850 303e774c79214df492fbc7f0c8fc4fe6 276 PANTHER PTHR23029 1 272 2.0E-38 T 22-04-2016 HMPREF9228_RS04850 303e774c79214df492fbc7f0c8fc4fe6 276 PANTHER PTHR23029:SF26 1 272 2.0E-38 T 22-04-2016 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.3E-35 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 1.3E-35 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 1.3E-35 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 1.3E-35 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.3E-35 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 157 4.4E-37 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 149 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 PANTHER PTHR30194 1 171 1.3E-55 T 22-04-2016 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 152 1.5E-50 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 SUPERFAMILY SSF53098 2 154 2.01E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 155 44.312 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 HMPREF9228_RS04065 c868616ef45c1cadc4115bf3e09a6c01 194 Gene3D G3DSA:3.30.420.10 2 155 2.0E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS00570 5de125ff7c82ff9f6449c449377cd939 467 Gene3D G3DSA:1.20.58.370 163 197 5.3E-4 T 22-04-2016 HMPREF9228_RS00570 5de125ff7c82ff9f6449c449377cd939 467 Gene3D G3DSA:1.10.3720.10 227 457 2.6E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00570 5de125ff7c82ff9f6449c449377cd939 467 SUPERFAMILY SSF161098 210 452 3.27E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00570 5de125ff7c82ff9f6449c449377cd939 467 PANTHER PTHR30193:SF17 170 467 7.6E-77 T 22-04-2016 HMPREF9228_RS00570 5de125ff7c82ff9f6449c449377cd939 467 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 454 2.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00570 5de125ff7c82ff9f6449c449377cd939 467 PANTHER PTHR30193 170 467 7.6E-77 T 22-04-2016 HMPREF9228_RS04110 fc83393c66d8b3bf11d556ec49ee3da8 277 PANTHER PTHR42301 11 273 1.7E-39 T 22-04-2016 HMPREF9228_RS04110 fc83393c66d8b3bf11d556ec49ee3da8 277 PIRSF PIRSF028754 1 277 9.5E-99 T 22-04-2016 IPR008492 Protein of unknown function DUF774 HMPREF9228_RS04110 fc83393c66d8b3bf11d556ec49ee3da8 277 SUPERFAMILY SSF159659 4 249 4.32E-73 T 22-04-2016 HMPREF9228_RS04110 fc83393c66d8b3bf11d556ec49ee3da8 277 Pfam PF09754 PAC2 family 16 223 1.5E-33 T 22-04-2016 IPR019151 Proteasome assembly chaperone 2 HMPREF9228_RS04110 fc83393c66d8b3bf11d556ec49ee3da8 277 PANTHER PTHR42301:SF2 11 273 1.7E-39 T 22-04-2016 HMPREF9228_RS08230 afa4681bf3bcb63e7e538adba0ce85dc 445 Pfam PF07690 Major Facilitator Superfamily 15 311 3.8E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS08230 afa4681bf3bcb63e7e538adba0ce85dc 445 SUPERFAMILY SSF103473 7 410 4.05E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS08230 afa4681bf3bcb63e7e538adba0ce85dc 445 PANTHER PTHR23501 38 445 1.7E-16 T 22-04-2016 HMPREF9228_RS08230 afa4681bf3bcb63e7e538adba0ce85dc 445 Gene3D G3DSA:1.20.1250.20 216 408 5.0E-22 T 22-04-2016 HMPREF9228_RS08230 afa4681bf3bcb63e7e538adba0ce85dc 445 Gene3D G3DSA:1.20.1250.20 7 196 2.4E-22 T 22-04-2016 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 Gene3D G3DSA:3.10.20.80 27 102 6.3E-33 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 32 101 5.1E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 109 193 3.2E-33 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 SUPERFAMILY SSF54364 30 103 4.84E-26 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 PANTHER PTHR10938 28 220 7.0E-59 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 26 195 27.899 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 SUPERFAMILY SSF55200 109 193 2.09E-29 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 32 195 5.1E-56 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 HMPREF9228_RS03095 d990bd3fc7dae8661f03d842b61cc1f8 261 Gene3D G3DSA:3.30.110.10 104 196 4.6E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 69 80 1.8E-24 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 1.8E-24 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 228 241 1.8E-24 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 195 206 1.8E-24 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 1.8E-24 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 PANTHER PTHR11777 1 892 0.0 T 22-04-2016 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 SUPERFAMILY SSF55681 3 247 6.96E-78 T 22-04-2016 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 SUPERFAMILY SSF55186 561 722 1.57E-40 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 662 706 1.2E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 SUPERFAMILY SSF50447 462 561 7.77E-16 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 872 4.8E-241 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 Pfam PF02272 DHHA1 domain 817 886 2.4E-11 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 Pfam PF01411 tRNA synthetases class II (A) 6 563 9.0E-177 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 SMART SM00863 662 707 4.6E-16 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 892 151.149 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 Gene3D G3DSA:3.30.930.10 1 244 4.4E-85 T 22-04-2016 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 PANTHER PTHR11777:SF9 1 892 0.0 T 22-04-2016 HMPREF9228_RS04645 654a7649ac41a74630a6d49463136df0 892 SUPERFAMILY SSF101353 248 455 2.62E-55 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 SUPERFAMILY SSF54211 88 184 1.39E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 Gene3D G3DSA:3.30.230.40 91 199 7.1E-30 T 22-04-2016 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 PANTHER PTHR23133 1 199 1.7E-82 T 22-04-2016 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 161 173 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 179 2.0E-54 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 199 39.526 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 PANTHER PTHR23133:SF2 1 199 1.7E-82 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 Gene3D G3DSA:3.30.230.40 3 90 2.5E-33 T 22-04-2016 HMPREF9228_RS02830 1a87ffde4f40920abc72af7d4c0278a7 199 SUPERFAMILY SSF54211 3 87 8.6E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS00035 bf1ba299fb5d4e45b123db2cb6fcf477 183 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 65 182 7.2E-37 T 22-04-2016 IPR021949 Domain of unknown function DUF3566. transmembrane HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PANTHER PTHR11956 253 572 1.4E-172 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PANTHER PTHR11956 4 237 1.4E-172 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PANTHER PTHR11956 593 620 1.4E-172 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 SUPERFAMILY SSF47323 474 620 1.44E-28 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 149 158 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 Gene3D G3DSA:3.30.1360.70 18 113 5.2E-29 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 620 24.102 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 Gene3D G3DSA:3.40.50.620 136 484 3.4E-91 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 Gene3D G3DSA:1.10.730.10 485 620 2.4E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 SUPERFAMILY SSF52374 135 490 8.19E-79 T 22-04-2016 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 37 561 1.7E-102 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 21 98 1.6E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 Pfam PF00750 tRNA synthetases class I (R) 136 441 1.9E-19 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 SUPERFAMILY SSF55190 28 109 9.42E-20 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 Pfam PF05746 DALR anticodon binding domain 480 620 2.9E-42 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PRINTS PR01038 Arginyl-tRNA synthetase signature 178 191 9.9E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PRINTS PR01038 Arginyl-tRNA synthetase signature 345 366 9.9E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 170 9.9E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 154 9.9E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 SMART SM00836 480 620 1.3E-47 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 SMART SM01016 4 98 2.5E-31 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PANTHER PTHR11956:SF6 253 572 1.4E-172 T 22-04-2016 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PANTHER PTHR11956:SF6 4 237 1.4E-172 T 22-04-2016 HMPREF9228_RS08855 3e9d7fde16fb6fb2359243d1b23e055e 620 PANTHER PTHR11956:SF6 593 620 1.4E-172 T 22-04-2016 HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 Gene3D G3DSA:3.40.50.970 29 204 7.1E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 SUPERFAMILY SSF52518 397 620 3.04E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 SUPERFAMILY SSF52467 215 387 1.4E-57 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 PANTHER PTHR18968:SF116 10 624 1.9E-293 T 22-04-2016 HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 31 195 8.4E-55 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 Gene3D G3DSA:3.40.50.1220 219 380 1.2E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 593 6.0E-41 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 222 356 1.4E-46 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 SUPERFAMILY SSF52518 28 210 6.8E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 PANTHER PTHR18968 10 624 1.9E-293 T 22-04-2016 HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 31 616 3.1E-215 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS01950 59f2f9f50d1e2b0507bab512d05ce4cb 654 Gene3D G3DSA:3.40.50.970 381 609 2.3E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 Gene3D G3DSA:3.90.1150.10 387 503 3.8E-10 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 PANTHER PTHR11751:SF294 110 505 7.3E-92 T 22-04-2016 HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 Gene3D G3DSA:3.40.640.10 174 386 1.1E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.2E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.2E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 SUPERFAMILY SSF53383 110 503 3.71E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 Gene3D G3DSA:1.10.10.10 4 76 3.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 PANTHER PTHR11751 110 505 7.3E-92 T 22-04-2016 HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 SUPERFAMILY SSF46785 6 84 1.24E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 SMART SM00345 17 76 1.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 4.5E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS06515 15b5866b1f94eca2b4d4c0408c17d2e3 507 Pfam PF00155 Aminotransferase class I and II 174 486 5.6E-33 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 PANTHER PTHR32039:SF7 1 184 1.4E-187 T 22-04-2016 IPR004482 Mg chelatase-related protein HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 PANTHER PTHR32039:SF7 200 509 1.4E-187 T 22-04-2016 IPR004482 Mg chelatase-related protein HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 Gene3D G3DSA:3.40.50.300 200 399 4.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 SUPERFAMILY SSF52540 470 507 1.54E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 SUPERFAMILY SSF52540 200 430 1.54E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 200 403 2.1E-86 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 Gene3D G3DSA:3.30.230.10 2 168 1.1E-35 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 SMART SM00382 220 403 5.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 SUPERFAMILY SSF54211 6 168 4.17E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 143 6.2E-37 T 22-04-2016 HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 9 505 6.5E-144 T 22-04-2016 IPR004482 Mg chelatase-related protein HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 PANTHER PTHR32039 1 184 1.4E-187 T 22-04-2016 HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 PANTHER PTHR32039 200 509 1.4E-187 T 22-04-2016 HMPREF9228_RS05045 c6570a30ccd969be84dce0eeafa957d4 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 413 507 2.9E-20 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 PANTHER PTHR32282:SF0 30 633 4.6E-104 T 22-04-2016 HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 SUPERFAMILY SSF53955 67 297 3.09E-66 T 22-04-2016 IPR023346 Lysozyme-like domain HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 Gene3D G3DSA:3.40.710.10 273 712 2.9E-61 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 Gene3D G3DSA:1.10.3810.10 80 272 8.3E-65 T 22-04-2016 HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 Pfam PF00905 Penicillin binding protein transpeptidase domain 373 638 6.9E-13 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 PANTHER PTHR32282 30 633 4.6E-104 T 22-04-2016 HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 SUPERFAMILY SSF56601 254 273 2.69E-51 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 SUPERFAMILY SSF56601 308 717 2.69E-51 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS06830 3a96a9d3d3d346dffd4b6c8ebb171328 758 Pfam PF00912 Transglycosylase 81 269 5.3E-56 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 PANTHER PTHR11938:SF4 1 482 4.4E-110 T 22-04-2016 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 Gene3D G3DSA:3.40.50.720 9 117 5.5E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 SUPERFAMILY SSF51971 287 344 2.53E-53 T 22-04-2016 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 SUPERFAMILY SSF51971 8 226 2.53E-53 T 22-04-2016 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 180 7.8E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 Gene3D G3DSA:3.50.50.60 118 344 6.3E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 PIRSF PIRSF000362 3 483 4.2E-158 T 22-04-2016 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 PRINTS PR00419 Adrenodoxin reductase family signature 159 173 4.5E-15 T 22-04-2016 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 PRINTS PR00419 Adrenodoxin reductase family signature 10 32 4.5E-15 T 22-04-2016 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 PRINTS PR00419 Adrenodoxin reductase family signature 88 98 4.5E-15 T 22-04-2016 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 PRINTS PR00419 Adrenodoxin reductase family signature 227 240 4.5E-15 T 22-04-2016 HMPREF9228_RS00440 7bd557cf468bed3600f0167f3eb4c0cb 483 PANTHER PTHR11938 1 482 4.4E-110 T 22-04-2016 HMPREF9228_RS05350 4d837e11368f2bc62c1a7940db2ba276 390 Gene3D G3DSA:3.40.50.1980 201 305 8.3E-4 T 22-04-2016 HMPREF9228_RS05350 4d837e11368f2bc62c1a7940db2ba276 390 PANTHER PTHR30477:SF1 46 345 2.1E-27 T 22-04-2016 HMPREF9228_RS05350 4d837e11368f2bc62c1a7940db2ba276 390 Gene3D G3DSA:3.40.50.1980 48 188 8.0E-31 T 22-04-2016 HMPREF9228_RS05350 4d837e11368f2bc62c1a7940db2ba276 390 SUPERFAMILY SSF53807 46 308 8.34E-52 T 22-04-2016 HMPREF9228_RS05350 4d837e11368f2bc62c1a7940db2ba276 390 PANTHER PTHR30477 46 345 2.1E-27 T 22-04-2016 HMPREF9228_RS05350 4d837e11368f2bc62c1a7940db2ba276 390 Pfam PF01297 Zinc-uptake complex component A periplasmic 51 303 6.3E-37 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 HMPREF9228_RS03865 6f3cfd2772e575ce96fa2c4a2e6515fa 177 SUPERFAMILY SSF55729 5 161 4.03E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS03865 6f3cfd2772e575ce96fa2c4a2e6515fa 177 PANTHER PTHR39173 1 152 3.2E-25 T 22-04-2016 HMPREF9228_RS03865 6f3cfd2772e575ce96fa2c4a2e6515fa 177 Pfam PF13302 Acetyltransferase (GNAT) domain 66 149 3.8E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS03865 6f3cfd2772e575ce96fa2c4a2e6515fa 177 Gene3D G3DSA:3.40.630.30 24 160 2.3E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS03135 3fe0c1784c38ec478bfb57e2bbd074b8 304 PANTHER PTHR33969:SF2 24 286 2.6E-34 T 22-04-2016 HMPREF9228_RS03135 3fe0c1784c38ec478bfb57e2bbd074b8 304 Pfam PF02616 Segregation and condensation protein ScpA 57 285 2.0E-29 T 22-04-2016 IPR003768 Segregation and condensation protein A HMPREF9228_RS03135 3fe0c1784c38ec478bfb57e2bbd074b8 304 PANTHER PTHR33969 24 286 2.6E-34 T 22-04-2016 HMPREF9228_RS02165 ebf2a5568e61b9bfdd5694566b09422d 261 Pfam PF01695 IstB-like ATP binding protein 73 245 1.0E-52 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 HMPREF9228_RS02165 ebf2a5568e61b9bfdd5694566b09422d 261 PANTHER PTHR30050 41 261 2.0E-49 T 22-04-2016 HMPREF9228_RS02165 ebf2a5568e61b9bfdd5694566b09422d 261 Gene3D G3DSA:3.40.50.300 100 246 3.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02165 ebf2a5568e61b9bfdd5694566b09422d 261 SUPERFAMILY SSF52540 113 244 7.1E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02165 ebf2a5568e61b9bfdd5694566b09422d 261 SMART SM00382 114 246 2.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02165 ebf2a5568e61b9bfdd5694566b09422d 261 PIRSF PIRSF003073 22 261 2.2E-66 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein HMPREF9228_RS05680 ebf2a5568e61b9bfdd5694566b09422d 261 Pfam PF01695 IstB-like ATP binding protein 73 245 1.0E-52 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 HMPREF9228_RS05680 ebf2a5568e61b9bfdd5694566b09422d 261 PANTHER PTHR30050 41 261 2.0E-49 T 22-04-2016 HMPREF9228_RS05680 ebf2a5568e61b9bfdd5694566b09422d 261 Gene3D G3DSA:3.40.50.300 100 246 3.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05680 ebf2a5568e61b9bfdd5694566b09422d 261 SUPERFAMILY SSF52540 113 244 7.1E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05680 ebf2a5568e61b9bfdd5694566b09422d 261 SMART SM00382 114 246 2.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05680 ebf2a5568e61b9bfdd5694566b09422d 261 PIRSF PIRSF003073 22 261 2.2E-66 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein HMPREF9228_RS00765 ebf2a5568e61b9bfdd5694566b09422d 261 Pfam PF01695 IstB-like ATP binding protein 73 245 1.0E-52 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 HMPREF9228_RS00765 ebf2a5568e61b9bfdd5694566b09422d 261 PANTHER PTHR30050 41 261 2.0E-49 T 22-04-2016 HMPREF9228_RS00765 ebf2a5568e61b9bfdd5694566b09422d 261 Gene3D G3DSA:3.40.50.300 100 246 3.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00765 ebf2a5568e61b9bfdd5694566b09422d 261 SUPERFAMILY SSF52540 113 244 7.1E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00765 ebf2a5568e61b9bfdd5694566b09422d 261 SMART SM00382 114 246 2.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS00765 ebf2a5568e61b9bfdd5694566b09422d 261 PIRSF PIRSF003073 22 261 2.2E-66 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein HMPREF9228_RS06965 ebf2a5568e61b9bfdd5694566b09422d 261 Pfam PF01695 IstB-like ATP binding protein 73 245 1.0E-52 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 HMPREF9228_RS06965 ebf2a5568e61b9bfdd5694566b09422d 261 PANTHER PTHR30050 41 261 2.0E-49 T 22-04-2016 HMPREF9228_RS06965 ebf2a5568e61b9bfdd5694566b09422d 261 Gene3D G3DSA:3.40.50.300 100 246 3.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06965 ebf2a5568e61b9bfdd5694566b09422d 261 SUPERFAMILY SSF52540 113 244 7.1E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06965 ebf2a5568e61b9bfdd5694566b09422d 261 SMART SM00382 114 246 2.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06965 ebf2a5568e61b9bfdd5694566b09422d 261 PIRSF PIRSF003073 22 261 2.2E-66 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 Pfam PF00701 Dihydrodipicolinate synthetase family 7 297 1.6E-68 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 SMART SM01130 6 296 2.4E-89 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 SUPERFAMILY SSF51569 3 297 4.4E-82 T 22-04-2016 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 169 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 8.4E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 8.4E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 8.4E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 8.4E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 PIRSF PIRSF001365 2 297 5.6E-77 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 Gene3D G3DSA:3.20.20.70 2 297 1.3E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS08775 8e379e35df203fba1d537e00ff7b7bf1 297 PANTHER PTHR12128 5 297 6.1E-83 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02205 eed6e8f20005b31b49ee5bb6a22738f0 531 PANTHER PTHR18968 1 401 9.8E-17 T 22-04-2016 HMPREF9228_RS02205 eed6e8f20005b31b49ee5bb6a22738f0 531 PANTHER PTHR18968:SF114 1 401 9.8E-17 T 22-04-2016 HMPREF9228_RS02205 eed6e8f20005b31b49ee5bb6a22738f0 531 Gene3D G3DSA:3.40.50.970 2 109 3.2E-13 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS02205 eed6e8f20005b31b49ee5bb6a22738f0 531 SUPERFAMILY SSF52518 296 486 2.18E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS02205 eed6e8f20005b31b49ee5bb6a22738f0 531 SUPERFAMILY SSF52518 2 131 5.09E-12 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS02205 eed6e8f20005b31b49ee5bb6a22738f0 531 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 2 108 2.4E-6 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 HMPREF9228_RS02205 eed6e8f20005b31b49ee5bb6a22738f0 531 Gene3D G3DSA:3.40.50.970 299 490 7.3E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 112 6.9E-41 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 Gene3D G3DSA:3.30.1490.20 132 203 3.0E-13 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 Gene3D G3DSA:3.40.50.20 5 131 2.9E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 SUPERFAMILY SSF51230 534 607 1.31E-19 T 22-04-2016 IPR011053 Single hybrid motif HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 Gene3D G3DSA:2.40.50.100 537 608 3.1E-23 T 22-04-2016 HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 Pfam PF00364 Biotin-requiring enzyme 542 607 6.1E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 Gene3D G3DSA:3.30.470.20 205 448 9.7E-83 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 PANTHER PTHR18866 6 617 2.6E-202 T 22-04-2016 HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 SUPERFAMILY SSF56059 86 326 2.12E-53 T 22-04-2016 HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 Pfam PF02785 Biotin carboxylase C-terminal domain 334 446 2.8E-35 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 SUPERFAMILY SSF52440 4 115 3.24E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 SUPERFAMILY SSF51246 328 447 1.31E-33 T 22-04-2016 IPR011054 Rudiment single hybrid motif HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 323 1.2E-53 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 HMPREF9228_RS08675 41972207f5b63b66479e0e4e88be5ed9 622 SMART SM00878 334 445 1.9E-48 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal HMPREF9228_RS01780 f185a4c1b7c1187a35ada6880c31fc51 1240 Pfam PF12892 T surface-antigen of pili 1131 1183 2.9E-5 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker HMPREF9228_RS01780 f185a4c1b7c1187a35ada6880c31fc51 1240 Pfam PF12892 T surface-antigen of pili 988 1070 0.17 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker HMPREF9228_RS01780 f185a4c1b7c1187a35ada6880c31fc51 1240 Pfam PF13519 von Willebrand factor type A domain 510 622 2.6E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS01780 f185a4c1b7c1187a35ada6880c31fc51 1240 SUPERFAMILY SSF53300 505 629 1.91E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS01780 f185a4c1b7c1187a35ada6880c31fc51 1240 Gene3D G3DSA:2.60.40.1140 929 1014 1.8E-10 T 22-04-2016 IPR008970 Collagen-binding surface protein Cna, B-type domain HMPREF9228_RS01780 f185a4c1b7c1187a35ada6880c31fc51 1240 Gene3D G3DSA:3.40.50.410 662 688 5.2E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS01780 f185a4c1b7c1187a35ada6880c31fc51 1240 Gene3D G3DSA:3.40.50.410 507 627 5.2E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS01780 f185a4c1b7c1187a35ada6880c31fc51 1240 SUPERFAMILY SSF49478 929 1009 1.83E-7 T 22-04-2016 HMPREF9228_RS09180 2aeb12970f7908f3a4a9b1f8e118608a 438 Pfam PF13635 Domain of unknown function (DUF4143) 253 387 2.1E-19 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 HMPREF9228_RS09180 2aeb12970f7908f3a4a9b1f8e118608a 438 Pfam PF13173 AAA domain 22 152 1.0E-23 T 22-04-2016 HMPREF9228_RS09180 2aeb12970f7908f3a4a9b1f8e118608a 438 PANTHER PTHR33295:SF7 1 385 5.2E-50 T 22-04-2016 HMPREF9228_RS09180 2aeb12970f7908f3a4a9b1f8e118608a 438 PANTHER PTHR33295 1 385 5.2E-50 T 22-04-2016 HMPREF9228_RS09180 2aeb12970f7908f3a4a9b1f8e118608a 438 Gene3D G3DSA:3.40.50.300 3 100 2.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09180 2aeb12970f7908f3a4a9b1f8e118608a 438 SUPERFAMILY SSF52540 6 217 3.71E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Pfam PF00562 RNA polymerase Rpb2, domain 6 641 1064 6.0E-155 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 PANTHER PTHR20856 361 948 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:2.40.50.150 745 879 2.0E-56 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 PANTHER PTHR20856:SF20 974 1146 0.0 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:2.40.50.100 638 708 1.5E-28 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 PANTHER PTHR20856 1 56 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Pfam PF04561 RNA polymerase Rpb2, domain 2 177 376 1.5E-24 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Pfam PF04560 RNA polymerase Rpb2, domain 7 1066 1140 3.7E-25 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 250 854 4.5E-293 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:2.40.270.10 880 1042 3.0E-75 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:2.40.270.10 709 736 3.0E-75 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:2.30.150.10 514 579 5.0E-23 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Pfam PF10385 RNA polymerase beta subunit external 1 domain 513 579 8.0E-22 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 PANTHER PTHR20856:SF20 361 948 0.0 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Pfam PF04563 RNA polymerase beta subunit 43 421 5.8E-21 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 PANTHER PTHR20856:SF20 1 56 0.0 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 SUPERFAMILY SSF64484 30 1148 0.0 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:3.90.1110.10 179 347 8.5E-59 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 PANTHER PTHR20856:SF20 79 345 0.0 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 PANTHER PTHR20856 974 1146 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 PANTHER PTHR20856 79 345 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:3.90.1100.10 582 636 4.7E-136 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:3.90.1100.10 365 513 4.7E-136 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Gene3D G3DSA:3.90.1100.10 36 177 4.7E-136 T 22-04-2016 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 ProSitePatterns PS01166 RNA polymerases beta chain signature. 883 895 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 30 1142 12.077 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS06770 fb90f8f3653f2d449e6c26a2602eba09 1187 Pfam PF04565 RNA polymerase Rpb2, domain 3 435 503 3.7E-25 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Gene3D G3DSA:3.30.470.30 179 322 4.4E-46 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 SUPERFAMILY SSF52113 852 928 1.23E-18 T 22-04-2016 IPR001357 BRCT domain HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 854 924 2.4E-11 T 22-04-2016 IPR001357 BRCT domain HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Gene3D G3DSA:3.40.50.10190 852 928 4.8E-25 T 22-04-2016 IPR001357 BRCT domain HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 PANTHER PTHR23389:SF9 740 779 3.4E-138 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 PANTHER PTHR23389:SF9 689 696 3.4E-138 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 PANTHER PTHR23389:SF9 40 550 3.4E-138 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 SMART SM00292 851 928 4.1E-12 T 22-04-2016 IPR001357 BRCT domain HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 65 388 7.6E-104 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 481 508 1.9E-7 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Gene3D G3DSA:1.10.150.20 758 842 2.2E-19 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 SUPERFAMILY SSF50249 388 468 2.91E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 175 204 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Pfam PF12826 Helix-hairpin-helix motif 764 820 1.9E-16 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 401 416 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 PANTHER PTHR23389 740 779 3.4E-138 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 PANTHER PTHR23389 689 696 3.4E-138 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 PANTHER PTHR23389 40 550 3.4E-138 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Gene3D G3DSA:1.10.150.20 581 608 1.9E-5 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Gene3D G3DSA:1.10.150.20 509 538 1.9E-5 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Gene3D G3DSA:1.10.287.610 53 125 1.8E-22 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 SUPERFAMILY SSF47781 747 820 1.37E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 392 468 1.5E-30 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 SUPERFAMILY SSF56091 62 386 2.4E-103 T 22-04-2016 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 75 538 6.6E-158 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Hamap MF_01588 DNA ligase [ligA]. 59 925 56.069 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 SUPERFAMILY SSF47781 476 539 2.89E-12 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 Gene3D G3DSA:2.40.50.140 390 460 1.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05790 165a1fe7e6f3c9ae4b04fcbdbac2cb35 930 SMART SM00532 61 522 9.2E-208 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 HMPREF9228_RS07265 2901bc633be0b726a98d206b1925e98e 403 SUPERFAMILY SSF53383 32 401 1.16E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS07265 2901bc633be0b726a98d206b1925e98e 403 Gene3D G3DSA:3.90.1150.10 287 403 6.3E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS07265 2901bc633be0b726a98d206b1925e98e 403 PANTHER PTHR11751:SF401 23 401 3.0E-116 T 22-04-2016 HMPREF9228_RS07265 2901bc633be0b726a98d206b1925e98e 403 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 HMPREF9228_RS07265 2901bc633be0b726a98d206b1925e98e 403 Pfam PF00155 Aminotransferase class I and II 42 396 7.9E-61 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS07265 2901bc633be0b726a98d206b1925e98e 403 Gene3D G3DSA:3.40.640.10 55 286 9.0E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS07265 2901bc633be0b726a98d206b1925e98e 403 PANTHER PTHR11751 23 401 3.0E-116 T 22-04-2016 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 252 270 2.8E-24 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 283 304 2.8E-24 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 90 99 2.8E-24 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 54 65 2.8E-24 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 44 373 1.4E-101 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 31 549 34.062 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 SUPERFAMILY SSF47323 397 548 3.14E-26 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 SUPERFAMILY SSF52374 32 372 6.19E-75 T 22-04-2016 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 31 547 3.5E-118 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 Gene3D G3DSA:3.40.50.620 48 365 4.0E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 Gene3D G3DSA:1.20.120.640 366 466 6.2E-16 T 22-04-2016 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 PANTHER PTHR10890 6 548 6.1E-168 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 SMART SM00840 410 477 3.2E-5 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 HMPREF9228_RS01920 0344003464cc54d49d351c084fcd85f1 549 Pfam PF09190 DALR domain 411 471 8.6E-6 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 HMPREF9228_RS01200 cdaa4d627238f7923df1fe8a8a8655bc 506 PANTHER PTHR12994:SF17 3 102 2.9E-45 T 22-04-2016 HMPREF9228_RS01200 cdaa4d627238f7923df1fe8a8a8655bc 506 PANTHER PTHR12994:SF17 122 472 2.9E-45 T 22-04-2016 HMPREF9228_RS01200 cdaa4d627238f7923df1fe8a8a8655bc 506 Pfam PF03577 Peptidase family C69 2 433 5.6E-186 T 22-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 HMPREF9228_RS01200 cdaa4d627238f7923df1fe8a8a8655bc 506 PANTHER PTHR12994 3 102 2.9E-45 T 22-04-2016 HMPREF9228_RS01200 cdaa4d627238f7923df1fe8a8a8655bc 506 PANTHER PTHR12994 122 472 2.9E-45 T 22-04-2016 HMPREF9228_RS02845 d7621fd0859354ad1ad3fd853afe43e4 241 PANTHER PTHR21235 1 241 8.7E-79 T 22-04-2016 HMPREF9228_RS02845 d7621fd0859354ad1ad3fd853afe43e4 241 Pfam PF00977 Histidine biosynthesis protein 5 231 4.7E-62 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 HMPREF9228_RS02845 d7621fd0859354ad1ad3fd853afe43e4 241 Gene3D G3DSA:3.20.20.70 5 239 1.6E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS02845 d7621fd0859354ad1ad3fd853afe43e4 241 SUPERFAMILY SSF51366 3 239 7.38E-61 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS02845 d7621fd0859354ad1ad3fd853afe43e4 241 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 239 32.181 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 HMPREF9228_RS02845 d7621fd0859354ad1ad3fd853afe43e4 241 PANTHER PTHR21235:SF15 1 241 8.7E-79 T 22-04-2016 HMPREF9228_RS02845 d7621fd0859354ad1ad3fd853afe43e4 241 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 1 241 8.1E-133 T 22-04-2016 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 SMART SM00354 1 73 2.1E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 314 8.2E-24 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 SUPERFAMILY SSF53822 73 315 1.46E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 1.4E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 SUPERFAMILY SSF47413 1 61 9.56E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 Gene3D G3DSA:3.40.50.2300 56 173 2.1E-25 T 22-04-2016 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 PANTHER PTHR30146 1 326 8.5E-76 T 22-04-2016 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 Gene3D G3DSA:3.40.50.2300 174 310 2.4E-34 T 22-04-2016 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 Gene3D G3DSA:1.10.260.40 2 55 7.5E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS02650 900da3dd745268febef1bdc8c5ed6d97 346 PANTHER PTHR30146:SF4 1 326 8.5E-76 T 22-04-2016 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 SUPERFAMILY SSF50993 230 388 2.14E-70 T 22-04-2016 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 SUPERFAMILY SSF50993 10 186 2.14E-70 T 22-04-2016 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 SUPERFAMILY SSF50993 423 465 2.14E-70 T 22-04-2016 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 SUPERFAMILY SSF50993 564 623 2.14E-70 T 22-04-2016 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 719 749 - T 22-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PANTHER PTHR11757 229 467 2.1E-195 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PANTHER PTHR11757 13 188 2.1E-195 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PANTHER PTHR11757 562 815 2.1E-195 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PANTHER PTHR11757 843 918 2.1E-195 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 Gene3D G3DSA:2.130.10.120 418 481 2.8E-102 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 Gene3D G3DSA:2.130.10.120 231 384 2.8E-102 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 Gene3D G3DSA:2.130.10.120 572 619 2.8E-102 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 Gene3D G3DSA:2.130.10.120 81 184 2.8E-102 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 SUPERFAMILY SSF53474 630 809 2.03E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 SUPERFAMILY SSF53474 838 893 2.03E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 Pfam PF00326 Prolyl oligopeptidase family 674 915 5.7E-54 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 13 457 1.5E-60 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 Gene3D G3DSA:3.40.50.1820 630 898 1.2E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 742 762 8.2E-36 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 801 816 8.2E-36 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 658 676 8.2E-36 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 684 708 8.2E-36 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS06850 3ba944e0ca495d0d2632a09874fb50e7 918 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 712 731 8.2E-36 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 3 177 1.5E-66 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 2 177 33.658 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 Pfam PF00347 Ribosomal protein L6 12 83 3.8E-15 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 Pfam PF00347 Ribosomal protein L6 91 165 9.1E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 Gene3D G3DSA:3.90.930.12 84 178 1.5E-36 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 PANTHER PTHR11655 1 179 1.8E-71 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 Gene3D G3DSA:3.90.930.12 3 83 5.4E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 SUPERFAMILY SSF56053 84 177 2.02E-34 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 1.92E-28 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.92E-28 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 1.92E-28 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 PIRSF PIRSF002162 1 178 1.1E-41 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 SUPERFAMILY SSF56053 1 83 3.84E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS08120 037d549d9f00bb352832dc9eb1c8722b 179 PANTHER PTHR11655:SF14 1 179 1.8E-71 T 22-04-2016 HMPREF9228_RS06640 613ab7dcd3d5c1fdfb168706ac82df13 244 PANTHER PTHR11079 1 144 4.9E-61 T 22-04-2016 HMPREF9228_RS06640 613ab7dcd3d5c1fdfb168706ac82df13 244 PANTHER PTHR11079 165 242 4.9E-61 T 22-04-2016 HMPREF9228_RS06640 613ab7dcd3d5c1fdfb168706ac82df13 244 PANTHER PTHR11079:SF61 1 144 4.9E-61 T 22-04-2016 HMPREF9228_RS06640 613ab7dcd3d5c1fdfb168706ac82df13 244 PANTHER PTHR11079:SF61 165 242 4.9E-61 T 22-04-2016 HMPREF9228_RS06640 613ab7dcd3d5c1fdfb168706ac82df13 244 Pfam PF00849 RNA pseudouridylate synthase 10 189 3.4E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS06640 613ab7dcd3d5c1fdfb168706ac82df13 244 SUPERFAMILY SSF55120 1 241 9.92E-44 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS06640 613ab7dcd3d5c1fdfb168706ac82df13 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 48 62 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS03915 1a292839fc7970f47b5eb11ed3dc8389 222 Gene3D G3DSA:3.20.20.70 2 219 2.3E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS03915 1a292839fc7970f47b5eb11ed3dc8389 222 SUPERFAMILY SSF51366 4 214 3.3E-63 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS03915 1a292839fc7970f47b5eb11ed3dc8389 222 PANTHER PTHR11749 2 222 2.3E-102 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS03915 1a292839fc7970f47b5eb11ed3dc8389 222 PIRSF PIRSF001461 1 222 3.4E-87 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS03915 1a292839fc7970f47b5eb11ed3dc8389 222 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS03915 1a292839fc7970f47b5eb11ed3dc8389 222 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS03915 1a292839fc7970f47b5eb11ed3dc8389 222 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 200 2.6E-73 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS03915 1a292839fc7970f47b5eb11ed3dc8389 222 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 213 1.1E-77 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 PANTHER PTHR23274 3 425 3.5E-124 T 22-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 Gene3D G3DSA:3.40.50.300 125 149 2.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 Gene3D G3DSA:3.40.50.300 192 262 2.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 Gene3D G3DSA:3.40.50.300 354 406 2.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 Pfam PF05970 PIF1-like helicase 10 151 1.0E-36 T 22-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 SUPERFAMILY SSF52540 124 417 1.12E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 Gene3D G3DSA:3.40.50.300 11 112 2.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 SMART SM00382 12 171 4.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07335 d724ca4aa648809ba65697a77e9b3abd 472 SUPERFAMILY SSF52540 3 197 5.4E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06585 e319ca23faf6f8d018a400602f933751 297 PANTHER PTHR30465 1 285 3.3E-51 T 22-04-2016 HMPREF9228_RS06585 e319ca23faf6f8d018a400602f933751 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 281 1.1E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06585 e319ca23faf6f8d018a400602f933751 297 SUPERFAMILY SSF161098 78 265 1.53E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06585 e319ca23faf6f8d018a400602f933751 297 PANTHER PTHR30465:SF10 1 285 3.3E-51 T 22-04-2016 HMPREF9228_RS06585 e319ca23faf6f8d018a400602f933751 297 Gene3D G3DSA:1.10.3720.10 76 281 3.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04895 91c70d1883bb76623a8bfb3c97dc0ce8 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.8E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS04895 91c70d1883bb76623a8bfb3c97dc0ce8 220 PANTHER PTHR30055 5 191 5.5E-22 T 22-04-2016 HMPREF9228_RS04895 91c70d1883bb76623a8bfb3c97dc0ce8 220 SUPERFAMILY SSF46689 4 75 2.98E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS04895 91c70d1883bb76623a8bfb3c97dc0ce8 220 Gene3D G3DSA:1.10.357.10 8 190 1.1E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS04895 91c70d1883bb76623a8bfb3c97dc0ce8 220 PANTHER PTHR30055:SF11 5 191 5.5E-22 T 22-04-2016 HMPREF9228_RS04895 91c70d1883bb76623a8bfb3c97dc0ce8 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.71E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS04895 91c70d1883bb76623a8bfb3c97dc0ce8 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.71E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS04895 91c70d1883bb76623a8bfb3c97dc0ce8 220 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SUPERFAMILY SSF55666 481 579 5.89E-23 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Pfam PF00013 KH domain 593 646 2.3E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SUPERFAMILY SSF54211 327 499 1.01E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Gene3D G3DSA:2.40.50.140 660 728 1.1E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SUPERFAMILY SSF50249 652 732 6.01E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 PANTHER PTHR11252:SF0 17 804 0.0 T 22-04-2016 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 PANTHER PTHR11252 17 804 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SUPERFAMILY SSF46915 266 352 1.39E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 268 350 1.5E-17 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Gene3D G3DSA:1.10.10.400 253 345 4.0E-24 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Pfam PF01138 3' exoribonuclease family, domain 1 355 487 1.0E-13 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Pfam PF01138 3' exoribonuclease family, domain 1 21 152 6.6E-14 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SUPERFAMILY SSF55666 153 262 8.18E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Pfam PF00575 S1 RNA binding domain 655 729 2.4E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Gene3D G3DSA:3.30.1370.10 586 659 5.7E-24 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 6 728 0.0 T 22-04-2016 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SMART SM00316 656 730 1.0E-17 T 22-04-2016 IPR022967 RNA-binding domain, S1 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SMART SM00322 586 651 6.1E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 18 728 3.1E-259 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Gene3D G3DSA:3.30.230.70 346 577 8.9E-80 T 22-04-2016 IPR027408 PNPase/RNase PH domain HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Gene3D G3DSA:3.30.230.70 10 249 2.1E-78 T 22-04-2016 IPR027408 PNPase/RNase PH domain HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SUPERFAMILY SSF54211 9 152 4.5E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 10 733 26.747 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 HMPREF9228_RS01810 6d37c207d4a4ce504bddb95e72a27171 902 SUPERFAMILY SSF54791 589 676 4.22E-19 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 34 427 7.3E-82 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 PANTHER PTHR11373:SF25 23 163 8.5E-43 T 22-04-2016 HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 Gene3D G3DSA:1.10.3210.10 18 220 1.6E-66 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 SUPERFAMILY SSF109604 202 249 1.96E-55 T 22-04-2016 HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 SUPERFAMILY SSF109604 22 171 1.96E-55 T 22-04-2016 HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 SMART SM00471 67 234 6.0E-11 T 22-04-2016 IPR003607 HD/PDEase domain HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 Gene3D G3DSA:1.10.3410.10 221 349 2.3E-15 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 PANTHER PTHR11373 23 163 8.5E-43 T 22-04-2016 HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 Pfam PF13286 Phosphohydrolase-associated domain 331 425 1.9E-16 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain HMPREF9228_RS06535 1ccb148bf66cbcad23bc18e6e87430c2 428 Pfam PF01966 HD domain 71 223 2.7E-16 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 SUPERFAMILY SSF51338 394 422 1.15E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 SUPERFAMILY SSF51338 18 87 1.15E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 PANTHER PTHR11113:SF7 7 424 3.4E-100 T 22-04-2016 HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 PIRSF PIRSF038994 57 425 6.7E-93 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 Gene3D G3DSA:3.20.20.140 102 369 7.8E-92 T 22-04-2016 HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 SUPERFAMILY SSF51556 87 383 1.42E-82 T 22-04-2016 IPR032466 Metal-dependent hydrolase HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 PANTHER PTHR11113 7 424 3.4E-100 T 22-04-2016 HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 Gene3D G3DSA:2.30.40.10 370 422 3.6E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 Gene3D G3DSA:2.30.40.10 14 101 3.1E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS03010 9787cc092fd189324749a4a0d2749db1 425 Pfam PF01979 Amidohydrolase family 83 422 1.6E-17 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 HMPREF9228_RS09585 fb13a8b6d8c5c2a8885bf90679922f13 473 Pfam PF13683 Integrase core domain 265 330 1.1E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS09585 fb13a8b6d8c5c2a8885bf90679922f13 473 Pfam PF13518 Helix-turn-helix domain 46 93 1.2E-9 T 22-04-2016 HMPREF9228_RS09585 fb13a8b6d8c5c2a8885bf90679922f13 473 SUPERFAMILY SSF53098 168 332 3.79E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS09585 fb13a8b6d8c5c2a8885bf90679922f13 473 SUPERFAMILY SSF46689 31 152 7.17E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS09585 fb13a8b6d8c5c2a8885bf90679922f13 473 Gene3D G3DSA:3.30.420.10 168 330 7.0E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS00265 219b3f8c8330f9519feb7a7d591012e5 463 Pfam PF07690 Major Facilitator Superfamily 25 382 3.8E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS00265 219b3f8c8330f9519feb7a7d591012e5 463 Gene3D G3DSA:1.20.1250.20 26 219 5.7E-15 T 22-04-2016 HMPREF9228_RS00265 219b3f8c8330f9519feb7a7d591012e5 463 SUPERFAMILY SSF103473 24 451 1.18E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS00265 219b3f8c8330f9519feb7a7d591012e5 463 Gene3D G3DSA:1.20.1250.20 260 440 4.3E-6 T 22-04-2016 HMPREF9228_RS00265 219b3f8c8330f9519feb7a7d591012e5 463 PANTHER PTHR23513 130 443 1.6E-23 T 22-04-2016 HMPREF9228_RS00265 219b3f8c8330f9519feb7a7d591012e5 463 PANTHER PTHR23513 1 109 1.6E-23 T 22-04-2016 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 SUPERFAMILY SSF52374 3 138 1.32E-91 T 22-04-2016 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 SUPERFAMILY SSF52374 173 396 1.32E-91 T 22-04-2016 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PANTHER PTHR11946:SF86 561 610 1.0E-173 T 22-04-2016 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PANTHER PTHR11946:SF86 4 525 1.0E-173 T 22-04-2016 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 6.3E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 6.3E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 6.3E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 6.3E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 6.3E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PRINTS PR01041 Methionyl-tRNA synthetase signature 398 409 6.3E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 Gene3D G3DSA:1.10.730.10 394 584 2.0E-46 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 543 1.4E-145 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PANTHER PTHR11946 561 610 1.0E-173 T 22-04-2016 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 PANTHER PTHR11946 4 525 1.0E-173 T 22-04-2016 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 SUPERFAMILY SSF57770 139 173 3.66E-11 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 Pfam PF08264 Anticodon-binding domain of tRNA 433 536 5.9E-7 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 SUPERFAMILY SSF47323 399 528 1.08E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 SUPERFAMILY SSF47323 558 584 1.08E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 Gene3D G3DSA:2.20.28.20 142 173 1.0E-17 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 Gene3D G3DSA:3.40.50.620 3 141 2.4E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 Gene3D G3DSA:3.40.50.620 180 393 2.4E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 Pfam PF09334 tRNA synthetases class I (M) 4 410 2.6E-154 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS09270 d66b00e956abb95588f50cf5b81447ef 621 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 595 38.134 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 Gene3D G3DSA:3.40.50.300 15 235 3.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 Gene3D G3DSA:3.40.50.300 276 517 2.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 SUPERFAMILY SSF52540 276 514 3.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 PANTHER PTHR24220:SF66 15 414 8.3E-97 T 22-04-2016 HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 Pfam PF00005 ABC transporter 296 454 7.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 Pfam PF00005 ABC transporter 31 183 4.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 SMART SM00382 304 502 1.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 SMART SM00382 40 238 2.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 PANTHER PTHR24220 15 414 8.3E-97 T 22-04-2016 HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 SUPERFAMILY SSF52540 12 234 5.44E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02615 4fd838324fda3de4094b8e4b804df5d6 783 Pfam PF02361 Cobalt transport protein 535 757 2.8E-35 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component HMPREF9228_RS05820 5cd130d2c12ff8ae3f221bafd3943fd9 258 Gene3D G3DSA:1.10.3720.10 52 242 1.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS05820 5cd130d2c12ff8ae3f221bafd3943fd9 258 PANTHER PTHR30151:SF20 8 243 3.5E-51 T 22-04-2016 HMPREF9228_RS05820 5cd130d2c12ff8ae3f221bafd3943fd9 258 PANTHER PTHR30151 8 243 3.5E-51 T 22-04-2016 HMPREF9228_RS05820 5cd130d2c12ff8ae3f221bafd3943fd9 258 SUPERFAMILY SSF161098 53 234 4.97E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS05820 5cd130d2c12ff8ae3f221bafd3943fd9 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 241 6.9E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Gene3D G3DSA:3.50.40.10 249 435 1.9E-79 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SUPERFAMILY SSF55681 658 761 2.68E-39 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SUPERFAMILY SSF55681 510 628 2.68E-39 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Pfam PF03483 B3/4 domain 250 428 2.6E-68 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Pfam PF03484 tRNA synthetase B5 domain 448 514 2.9E-17 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Gene3D G3DSA:3.30.56.10 4 41 6.8E-12 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Gene3D G3DSA:3.30.56.10 178 205 6.8E-12 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Pfam PF03147 Ferredoxin-fold anticodon binding domain 776 868 1.3E-25 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Gene3D G3DSA:3.30.930.10 531 762 7.3E-56 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SUPERFAMILY SSF50249 46 214 1.37E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Pfam PF01588 Putative tRNA binding domain 47 149 1.3E-8 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SMART SM00874 445 514 4.1E-23 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SUPERFAMILY SSF56037 250 441 8.37E-69 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SUPERFAMILY SSF54991 771 868 5.36E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Gene3D G3DSA:2.40.50.140 42 177 1.8E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Gene3D G3DSA:3.30.70.380 778 868 1.9E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 6 863 43.381 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 PANTHER PTHR10947:SF0 652 868 2.1E-225 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 PANTHER PTHR10947:SF0 3 630 2.1E-225 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 PANTHER PTHR10947 652 868 2.1E-225 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 PANTHER PTHR10947 3 630 2.1E-225 T 22-04-2016 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SMART SM00873 250 429 4.3E-89 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 Gene3D G3DSA:3.30.56.20 444 518 5.7E-24 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SMART SM00896 776 868 4.2E-40 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 6 868 2.7E-178 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 HMPREF9228_RS05730 814afd6bc806b350017cfcd636b97a33 869 SUPERFAMILY SSF46955 445 518 2.66E-16 T 22-04-2016 IPR009061 Putative DNA-binding domain HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 SUPERFAMILY SSF103263 2 390 2.09E-136 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 Pfam PF01264 Chorismate synthase 2 368 1.2E-114 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 ProSitePatterns PS00789 Chorismate synthase signature 3. 342 358 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 PIRSF PIRSF001456 1 385 1.5E-122 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 PANTHER PTHR21085 1 89 2.2E-162 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 PANTHER PTHR21085 106 394 2.2E-162 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 Gene3D G3DSA:3.60.150.10 1 392 9.9E-148 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 Hamap MF_00300 Chorismate synthase [aroC]. 2 375 34.01 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04625 d2aac94666240f3406662499d7aebfa2 395 TIGRFAM TIGR00033 aroC: chorismate synthase 2 373 1.0E-125 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04465 83ccafb8fc400f464c938c7f4486ef5d 94 Pfam PF13377 Periplasmic binding protein-like domain 2 90 4.6E-15 T 22-04-2016 HMPREF9228_RS04465 83ccafb8fc400f464c938c7f4486ef5d 94 PANTHER PTHR30146 2 93 2.6E-13 T 22-04-2016 HMPREF9228_RS04465 83ccafb8fc400f464c938c7f4486ef5d 94 Gene3D G3DSA:3.40.50.2300 2 92 1.3E-18 T 22-04-2016 HMPREF9228_RS04465 83ccafb8fc400f464c938c7f4486ef5d 94 SUPERFAMILY SSF53822 2 70 7.77E-16 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS04465 83ccafb8fc400f464c938c7f4486ef5d 94 PANTHER PTHR30146:SF48 2 93 2.6E-13 T 22-04-2016 HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 3.2E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 PRINTS PR00107 Phosphocarrier protein signature 39 54 2.3E-11 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 PRINTS PR00107 Phosphocarrier protein signature 54 71 2.3E-11 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.3E-11 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 PANTHER PTHR33705 1 80 5.3E-20 T 22-04-2016 HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.2E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 SUPERFAMILY SSF55594 1 82 4.71E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site HMPREF9228_RS00930 b0d969cf175cdf830e809400e6823c46 86 Gene3D G3DSA:3.30.1340.10 1 82 9.3E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like HMPREF9228_RS05390 85ca00deb4e4dbcdab4b8e4ac73b7b68 224 SUPERFAMILY SSF53271 66 218 1.02E-17 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS05390 85ca00deb4e4dbcdab4b8e4ac73b7b68 224 PANTHER PTHR11907:SF9 11 217 6.2E-13 T 22-04-2016 HMPREF9228_RS05390 85ca00deb4e4dbcdab4b8e4ac73b7b68 224 Pfam PF00156 Phosphoribosyl transferase domain 165 219 3.4E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 HMPREF9228_RS05390 85ca00deb4e4dbcdab4b8e4ac73b7b68 224 Gene3D G3DSA:3.40.50.2020 67 220 4.7E-22 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS05390 85ca00deb4e4dbcdab4b8e4ac73b7b68 224 PANTHER PTHR11907 11 217 6.2E-13 T 22-04-2016 HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 SUPERFAMILY SSF57825 93 137 1.44E-13 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 3 43 1.0E-15 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 95 137 1.0E-13 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 SUPERFAMILY SSF54893 1 92 8.63E-28 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 PANTHER PTHR35805 1 136 2.5E-43 T 22-04-2016 HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 2 88 9.4E-28 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 PANTHER PTHR35805:SF1 1 136 2.5E-43 T 22-04-2016 HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 Gene3D G3DSA:3.30.70.140 2 92 6.1E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal HMPREF9228_RS04295 8f3e640fdcd7dc823359deba13a1474e 139 Gene3D G3DSA:2.30.30.20 93 138 1.1E-17 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal HMPREF9228_RS02175 360c28d64dd2b6b239a0574bf4f0f8a4 186 PANTHER PTHR10948 1 47 2.1E-18 T 22-04-2016 HMPREF9228_RS02175 360c28d64dd2b6b239a0574bf4f0f8a4 186 PANTHER PTHR10948 68 185 2.1E-18 T 22-04-2016 HMPREF9228_RS02175 360c28d64dd2b6b239a0574bf4f0f8a4 186 Pfam PF13936 Helix-turn-helix domain 5 44 5.7E-12 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain HMPREF9228_RS04675 512508efb50aaeebf540f2e51d2b30ab 118 Gene3D G3DSA:2.30.30.110 1 106 2.2E-7 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor HMPREF9228_RS04675 512508efb50aaeebf540f2e51d2b30ab 118 SUPERFAMILY SSF50118 6 112 1.02E-13 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor HMPREF9228_RS04675 512508efb50aaeebf540f2e51d2b30ab 118 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 111 6.2E-7 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 HMPREF9228_RS07220 a8949c4210c946af2e35cd2d7c83da98 455 Pfam PF13742 OB-fold nucleic acid binding domain 64 152 9.5E-11 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 HMPREF9228_RS07220 a8949c4210c946af2e35cd2d7c83da98 455 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 56 451 20.479 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 HMPREF9228_RS07220 a8949c4210c946af2e35cd2d7c83da98 455 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 64 450 6.6E-110 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 HMPREF9228_RS07220 a8949c4210c946af2e35cd2d7c83da98 455 PANTHER PTHR30008:SF0 54 448 2.4E-101 T 22-04-2016 HMPREF9228_RS07220 a8949c4210c946af2e35cd2d7c83da98 455 PANTHER PTHR30008 54 448 2.4E-101 T 22-04-2016 HMPREF9228_RS07220 a8949c4210c946af2e35cd2d7c83da98 455 Pfam PF02601 Exonuclease VII, large subunit 385 448 1.8E-9 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 HMPREF9228_RS07220 a8949c4210c946af2e35cd2d7c83da98 455 Pfam PF02601 Exonuclease VII, large subunit 179 394 4.9E-62 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 HMPREF9228_RS04900 7d254618a712e518a4f707abd034032c 423 Gene3D G3DSA:1.20.1250.20 21 201 2.3E-11 T 22-04-2016 HMPREF9228_RS04900 7d254618a712e518a4f707abd034032c 423 Gene3D G3DSA:1.20.1250.20 238 413 4.6E-7 T 22-04-2016 HMPREF9228_RS04900 7d254618a712e518a4f707abd034032c 423 PANTHER PTHR23513 8 414 8.1E-52 T 22-04-2016 HMPREF9228_RS04900 7d254618a712e518a4f707abd034032c 423 SUPERFAMILY SSF103473 21 416 2.35E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS04900 7d254618a712e518a4f707abd034032c 423 PANTHER PTHR23513:SF4 8 414 8.1E-52 T 22-04-2016 HMPREF9228_RS04900 7d254618a712e518a4f707abd034032c 423 Pfam PF07690 Major Facilitator Superfamily 31 380 1.4E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS09670 f40c81c3413f353258248c174a35f8cf 188 Gene3D G3DSA:1.20.5.110 71 111 1.3E-18 T 22-04-2016 HMPREF9228_RS09670 f40c81c3413f353258248c174a35f8cf 188 Pfam PF07885 Ion channel 45 106 4.6E-14 T 22-04-2016 IPR013099 Potassium channel domain HMPREF9228_RS09670 f40c81c3413f353258248c174a35f8cf 188 PRINTS PR00169 Potassium channel signature 79 105 3.6E-6 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 HMPREF9228_RS09670 f40c81c3413f353258248c174a35f8cf 188 PRINTS PR00169 Potassium channel signature 50 72 3.6E-6 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 HMPREF9228_RS09670 f40c81c3413f353258248c174a35f8cf 188 PANTHER PTHR11537:SF137 56 123 6.1E-13 T 22-04-2016 HMPREF9228_RS09670 f40c81c3413f353258248c174a35f8cf 188 Gene3D G3DSA:1.10.287.70 53 69 8.8E-4 T 22-04-2016 HMPREF9228_RS09670 f40c81c3413f353258248c174a35f8cf 188 SUPERFAMILY SSF81324 48 118 9.55E-22 T 22-04-2016 HMPREF9228_RS09670 f40c81c3413f353258248c174a35f8cf 188 PANTHER PTHR11537 56 123 6.1E-13 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 HMPREF9228_RS06235 e1dad0151dc6091821fb720e38472ee8 250 SUPERFAMILY SSF56104 2 238 1.37E-75 T 22-04-2016 HMPREF9228_RS06235 e1dad0151dc6091821fb720e38472ee8 250 PANTHER PTHR11609:SF2 3 237 4.7E-100 T 22-04-2016 HMPREF9228_RS06235 e1dad0151dc6091821fb720e38472ee8 250 Gene3D G3DSA:3.30.200.20 6 93 4.8E-35 T 22-04-2016 HMPREF9228_RS06235 e1dad0151dc6091821fb720e38472ee8 250 Gene3D G3DSA:3.30.470.20 94 224 2.6E-47 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS06235 e1dad0151dc6091821fb720e38472ee8 250 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 238 5.6E-66 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 HMPREF9228_RS06235 e1dad0151dc6091821fb720e38472ee8 250 PANTHER PTHR11609 3 237 4.7E-100 T 22-04-2016 HMPREF9228_RS06235 e1dad0151dc6091821fb720e38472ee8 250 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 239 28.942 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 HMPREF9228_RS06235 e1dad0151dc6091821fb720e38472ee8 250 Pfam PF01259 SAICAR synthetase 6 234 1.1E-58 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 Pfam PF00310 Glutamine amidotransferases class-II 27 437 9.4E-165 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 PANTHER PTHR11938 16 1497 0.0 T 22-04-2016 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 SUPERFAMILY SSF51395 451 1212 6.51E-247 T 22-04-2016 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 SUPERFAMILY SSF69336 1228 1495 2.62E-85 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 PANTHER PTHR11938:SF1 16 1497 0.0 T 22-04-2016 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 Pfam PF01493 GXGXG motif 1258 1433 5.1E-70 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 Gene3D G3DSA:3.20.20.70 448 802 8.8E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 Pfam PF04898 Glutamate synthase central domain 464 751 1.9E-104 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 Gene3D G3DSA:3.20.20.70 845 1214 7.4E-170 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 Pfam PF01645 Conserved region in glutamate synthase 814 1179 1.2E-150 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 Gene3D G3DSA:3.60.20.10 27 447 7.8E-170 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 SUPERFAMILY SSF56235 27 439 1.29E-138 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS04460 468b72cc005bcff4bae026d7790d9e79 1523 Gene3D G3DSA:2.160.20.60 1233 1503 8.1E-97 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 SUPERFAMILY SSF52540 2 425 7.44E-175 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 PANTHER PTHR11846 4 426 4.1E-242 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 201.228 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 Pfam PF00709 Adenylosuccinate synthetase 4 421 2.3E-179 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 Gene3D G3DSA:1.10.300.10 101 194 3.2E-35 T 22-04-2016 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 SMART SM00788 3 422 1.9E-288 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 Gene3D G3DSA:3.90.170.10 265 423 2.4E-69 T 22-04-2016 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 Gene3D G3DSA:3.40.440.10 3 93 1.8E-71 T 22-04-2016 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 Gene3D G3DSA:3.40.440.10 195 264 1.8E-71 T 22-04-2016 HMPREF9228_RS00465 24519ee2ac8e2cf1bf88644d5d6e26c1 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 424 2.1E-169 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 SUPERFAMILY SSF63737 21 210 1.26E-39 T 22-04-2016 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 SUPERFAMILY SSF55486 222 470 9.38E-72 T 22-04-2016 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 1.5E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 332 344 1.5E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 279 289 1.5E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 328 1.5E-15 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 Gene3D G3DSA:1.10.390.10 327 472 1.1E-41 T 22-04-2016 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 Pfam PF11838 ERAP1-like C-terminal domain 545 857 1.4E-47 T 22-04-2016 IPR024571 ERAP1-like C-terminal domain HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 Pfam PF01433 Peptidase family M1 21 405 2.6E-70 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 PANTHER PTHR11533 21 611 4.6E-147 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 PANTHER PTHR11533 751 761 4.6E-147 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 865 8.6E-276 T 22-04-2016 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 PANTHER PTHR11533:SF190 21 611 4.6E-147 T 22-04-2016 HMPREF9228_RS06710 2f7135b2f98bd3be906629468ba8e273 869 PANTHER PTHR11533:SF190 751 761 4.6E-147 T 22-04-2016 HMPREF9228_RS02000 c07bcef2f5d8031c69486e625752eed5 440 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 7 372 2.3E-125 T 22-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 HMPREF9228_RS02000 c07bcef2f5d8031c69486e625752eed5 440 PIRSF PIRSF000484 3 438 3.2E-100 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 HMPREF9228_RS02000 c07bcef2f5d8031c69486e625752eed5 440 Gene3D G3DSA:3.20.140.10 5 370 8.0E-99 T 22-04-2016 HMPREF9228_RS02000 c07bcef2f5d8031c69486e625752eed5 440 PANTHER PTHR11098 5 433 1.2E-173 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 HMPREF9228_RS02000 c07bcef2f5d8031c69486e625752eed5 440 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 153 280 6.5E-8 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 HMPREF9228_RS02000 c07bcef2f5d8031c69486e625752eed5 440 PANTHER PTHR11098:SF8 5 433 1.2E-173 T 22-04-2016 HMPREF9228_RS02000 c07bcef2f5d8031c69486e625752eed5 440 SUPERFAMILY SSF54675 5 135 1.15E-42 T 22-04-2016 HMPREF9228_RS02000 c07bcef2f5d8031c69486e625752eed5 440 SUPERFAMILY SSF51690 137 435 2.8E-80 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 SUPERFAMILY SSF161098 79 276 1.96E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 Gene3D G3DSA:1.10.3720.10 392 582 1.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 Gene3D G3DSA:1.10.3720.10 79 276 1.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 410 592 9.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 275 1.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 PANTHER PTHR30151 387 594 3.0E-145 T 22-04-2016 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 PANTHER PTHR30151 84 241 3.0E-145 T 22-04-2016 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 PANTHER PTHR30151:SF10 387 594 3.0E-145 T 22-04-2016 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 PANTHER PTHR30151:SF10 84 241 3.0E-145 T 22-04-2016 HMPREF9228_RS02040 3d7c266d84904397cbe19663ebf64a1a 596 SUPERFAMILY SSF161098 391 580 6.28E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09030 cba482b34a1c6334c913453d95f05220 344 PANTHER PTHR32196 42 309 5.6E-44 T 22-04-2016 HMPREF9228_RS09030 cba482b34a1c6334c913453d95f05220 344 SUPERFAMILY SSF53822 37 322 6.87E-58 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS09030 cba482b34a1c6334c913453d95f05220 344 Gene3D G3DSA:3.40.50.2300 162 307 3.5E-31 T 22-04-2016 HMPREF9228_RS09030 cba482b34a1c6334c913453d95f05220 344 Pfam PF13407 Periplasmic binding protein domain 44 301 3.9E-49 T 22-04-2016 IPR025997 Periplasmic binding protein HMPREF9228_RS09030 cba482b34a1c6334c913453d95f05220 344 Gene3D G3DSA:3.40.50.2300 39 161 2.1E-27 T 22-04-2016 HMPREF9228_RS09030 cba482b34a1c6334c913453d95f05220 344 PANTHER PTHR32196:SF36 42 309 5.6E-44 T 22-04-2016 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Gene3D G3DSA:2.60.120.260 2 200 8.4E-66 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 309 611 9.7E-97 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PANTHER PTHR10066:SF72 6 540 2.8E-261 T 22-04-2016 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PANTHER PTHR10066:SF72 577 1032 2.8E-261 T 22-04-2016 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 46 211 6.5E-41 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 424 438 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 SUPERFAMILY SSF49303 213 301 4.32E-10 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 SUPERFAMILY SSF49785 6 211 3.12E-53 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Gene3D G3DSA:2.60.40.320 201 302 9.0E-21 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 SMART SM01038 751 1030 5.8E-92 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Gene3D G3DSA:2.70.98.10 739 1032 5.1E-76 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 SUPERFAMILY SSF51445 309 606 9.44E-84 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PANTHER PTHR10066 6 540 2.8E-261 T 22-04-2016 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PANTHER PTHR10066 577 1032 2.8E-261 T 22-04-2016 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 359 384 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Gene3D G3DSA:3.20.20.80 309 606 4.1E-90 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 SUPERFAMILY SSF74650 738 1032 1.24E-71 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Pfam PF02929 Beta galactosidase small chain 757 1029 2.3E-61 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 SUPERFAMILY SSF49303 605 716 5.76E-12 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Gene3D G3DSA:2.60.40.320 625 716 1.4E-10 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 Pfam PF00703 Glycosyl hydrolases family 2 213 297 2.8E-6 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PRINTS PR00132 Glycosyl hydrolase family 2 signature 424 439 7.9E-28 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PRINTS PR00132 Glycosyl hydrolase family 2 signature 495 510 7.9E-28 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PRINTS PR00132 Glycosyl hydrolase family 2 signature 349 367 7.9E-28 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PRINTS PR00132 Glycosyl hydrolase family 2 signature 139 154 7.9E-28 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS08500 60a195c097b191d2674104ebbd4e712f 1054 PRINTS PR00132 Glycosyl hydrolase family 2 signature 318 332 7.9E-28 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS06915 4d79e0588af8cbae480ad4ae940281f0 343 PANTHER PTHR33055 148 244 3.2E-16 T 22-04-2016 HMPREF9228_RS06915 4d79e0588af8cbae480ad4ae940281f0 343 PANTHER PTHR33055:SF1 148 244 3.2E-16 T 22-04-2016 HMPREF9228_RS06915 4d79e0588af8cbae480ad4ae940281f0 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 145 217 4.1E-12 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 Gene3D G3DSA:3.40.50.300 268 484 2.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 Gene3D G3DSA:3.40.50.300 3 234 5.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 SMART SM00382 278 472 0.12 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 SMART SM00382 29 218 6.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 SUPERFAMILY SSF52540 269 492 3.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 PANTHER PTHR24220:SF538 6 378 5.3E-125 T 22-04-2016 HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 SUPERFAMILY SSF52540 4 228 3.45E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 PANTHER PTHR24220 6 378 5.3E-125 T 22-04-2016 HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 Pfam PF00005 ABC transporter 20 169 3.6E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09025 3d95a0080cd64a54b1a5448718827cb5 514 Pfam PF00005 ABC transporter 270 424 1.6E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS02335 fcd10965a9ae33a3cd101d81e8b488d2 156 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 13 141 1.9E-39 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS02335 fcd10965a9ae33a3cd101d81e8b488d2 156 PANTHER PTHR30505 2 156 4.5E-34 T 22-04-2016 HMPREF9228_RS02335 fcd10965a9ae33a3cd101d81e8b488d2 156 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS02335 fcd10965a9ae33a3cd101d81e8b488d2 156 Gene3D G3DSA:3.40.930.10 6 155 1.3E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS02335 fcd10965a9ae33a3cd101d81e8b488d2 156 SUPERFAMILY SSF55804 9 155 7.46E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 HMPREF9228_RS02335 fcd10965a9ae33a3cd101d81e8b488d2 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 155 5.1E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 SUPERFAMILY SSF47413 1 60 2.29E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 SMART SM00354 1 71 4.0E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 PANTHER PTHR30146 1 297 3.8E-70 T 22-04-2016 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 PANTHER PTHR30146:SF31 1 297 3.8E-70 T 22-04-2016 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 Gene3D G3DSA:3.40.50.2300 171 308 2.1E-26 T 22-04-2016 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 2.2E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 SUPERFAMILY SSF53822 58 312 1.82E-43 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 Gene3D G3DSA:1.10.260.40 3 53 2.3E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 Gene3D G3DSA:3.40.50.2300 54 170 6.0E-34 T 22-04-2016 HMPREF9228_RS00500 1033dc7b175200ab1198bc2ca95b402d 350 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 271 1.8E-15 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 Gene3D G3DSA:3.60.15.10 62 311 6.4E-78 T 22-04-2016 IPR001279 Metallo-beta-lactamase HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 Pfam PF00753 Metallo-beta-lactamase superfamily 75 157 3.0E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 PIRSF PIRSF004803 57 608 1.9E-197 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 SMART SM00849 77 271 2.8E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 Hamap MF_01491 Ribonuclease J [rnj]. 60 608 38.912 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 PANTHER PTHR11203 56 614 6.8E-191 T 22-04-2016 HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 PANTHER PTHR11203:SF22 56 614 6.8E-191 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 SUPERFAMILY SSF56281 65 480 9.9E-91 T 22-04-2016 IPR001279 Metallo-beta-lactamase HMPREF9228_RS06715 38e509317d88d04e2a47ffb185f28c39 618 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 66 605 1.0E-143 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 Hamap MF_00104 Ribonuclease 3 [rnc]. 20 236 25.507 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 SMART SM00358 172 240 3.6E-9 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 SMART SM00535 31 166 2.7E-49 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 SUPERFAMILY SSF54768 125 241 1.57E-15 T 22-04-2016 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 Pfam PF00035 Double-stranded RNA binding motif 173 237 3.6E-9 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 29 238 1.2E-65 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 Pfam PF14622 Ribonuclease-III-like 30 156 7.9E-34 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 SUPERFAMILY SSF69065 12 174 6.8E-43 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 Gene3D G3DSA:3.30.160.20 170 239 5.1E-13 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 Gene3D G3DSA:1.10.1520.10 19 160 1.1E-41 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 ProSitePatterns PS00517 Ribonuclease III family signature. 53 61 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 HMPREF9228_RS01955 acbc7da8a32d023e9b2c08a4b013adde 247 PANTHER PTHR11207 11 244 7.6E-57 T 22-04-2016 HMPREF9228_RS05660 eb75a9cd3244745e2ebfa32abfb9a232 84 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 66 5.5E-18 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ HMPREF9228_RS05660 eb75a9cd3244745e2ebfa32abfb9a232 84 Pfam PF04221 RelB antitoxin 5 52 4.6E-14 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 SMART SM00278 107 126 45.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 SMART SM00278 72 91 0.14 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 SUPERFAMILY SSF46929 153 206 8.89E-8 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 Gene3D G3DSA:1.10.8.10 152 204 1.4E-10 T 22-04-2016 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 SUPERFAMILY SSF47781 65 130 6.43E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 Pfam PF14520 Helix-hairpin-helix domain 71 128 5.2E-17 T 22-04-2016 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 185 2.0E-40 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 Pfam PF01330 RuvA N terminal domain 1 61 1.3E-15 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 Gene3D G3DSA:2.40.50.140 1 63 2.2E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 Pfam PF07499 RuvA, C-terminal domain 154 204 5.8E-10 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 25.904 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 PANTHER PTHR33796 2 207 1.3E-55 T 22-04-2016 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 Gene3D G3DSA:1.10.150.20 68 132 1.6E-25 T 22-04-2016 HMPREF9228_RS04060 cd8de1a3d4cb089a461894fa02431fe9 208 SUPERFAMILY SSF50249 1 62 2.57E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 Gene3D G3DSA:3.10.330.20 3 58 3.8E-20 T 22-04-2016 HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 PIRSF PIRSF017269 1 302 4.2E-105 T 22-04-2016 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829 HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 PANTHER PTHR12133:SF1 88 323 2.2E-68 T 22-04-2016 HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 PANTHER PTHR12133:SF1 3 61 2.2E-68 T 22-04-2016 HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 Gene3D G3DSA:3.40.50.150 97 308 2.4E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 PANTHER PTHR12133 88 323 2.2E-68 T 22-04-2016 HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 PANTHER PTHR12133 3 61 2.2E-68 T 22-04-2016 HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 SUPERFAMILY SSF53335 87 289 4.06E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 SUPERFAMILY SSF53335 9 59 4.06E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 100 268 6.3E-20 T 22-04-2016 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829 HMPREF9228_RS04330 f02e6d7f65be3964d3904ffa075d7869 356 Pfam PF14801 tRNA methyltransferase complex GCD14 subunit N-term 5 55 2.3E-20 T 22-04-2016 HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 Gene3D G3DSA:3.40.50.2300 40 166 9.0E-60 T 22-04-2016 HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 Gene3D G3DSA:3.40.50.2300 306 373 9.0E-60 T 22-04-2016 HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 PANTHER PTHR30483:SF6 40 385 1.2E-79 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 Pfam PF13458 Periplasmic binding protein 44 385 3.2E-70 T 22-04-2016 IPR028081 Leucine-binding protein domain HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 83 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 45 61 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 296 309 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 SUPERFAMILY SSF53822 43 388 1.44E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 PANTHER PTHR30483 40 385 1.2E-79 T 22-04-2016 HMPREF9228_RS07380 040871bb46393999b8148e492cd1dc4d 395 Gene3D G3DSA:3.40.50.2300 178 248 1.3E-4 T 22-04-2016 HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 Gene3D G3DSA:3.30.1330.10 282 422 1.4E-52 T 22-04-2016 IPR016188 PurM-like, N-terminal domain HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 Gene3D G3DSA:3.30.1330.10 217 232 1.4E-52 T 22-04-2016 IPR016188 PurM-like, N-terminal domain HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 SMART SM01211 979 1242 6.0E-115 T 22-04-2016 HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 979 1242 2.8E-87 T 22-04-2016 HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 SUPERFAMILY SSF56042 433 600 2.27E-39 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 SUPERFAMILY SSF55326 625 799 2.88E-31 T 22-04-2016 HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 583 5.6E-22 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 3 1242 0.0 T 22-04-2016 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 Gene3D G3DSA:3.40.50.880 980 1220 4.5E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 SUPERFAMILY SSF52317 977 1242 1.01E-69 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 SUPERFAMILY SSF55326 285 422 4.88E-32 T 22-04-2016 HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 SUPERFAMILY SSF55326 192 228 4.88E-32 T 22-04-2016 HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 Gene3D G3DSA:3.30.1330.10 637 795 1.3E-19 T 22-04-2016 IPR016188 PurM-like, N-terminal domain HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 PANTHER PTHR10099 2 232 1.7E-220 T 22-04-2016 HMPREF9228_RS06240 de6ba9a13054edc8ac0c36cfb0a6bcb4 1244 PANTHER PTHR10099 255 1217 1.7E-220 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 Gene3D G3DSA:3.30.230.10 460 570 7.0E-26 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PANTHER PTHR23115:SF66 207 352 1.3E-90 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PANTHER PTHR23115:SF66 397 565 1.3E-90 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PANTHER PTHR23115:SF66 593 683 1.3E-90 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PANTHER PTHR23115:SF66 7 163 1.3E-90 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 Gene3D G3DSA:3.30.70.240 597 679 1.6E-15 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 SUPERFAMILY SSF54211 457 570 3.79E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 149 1.4E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 SUPERFAMILY SSF50447 219 331 6.48E-14 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 Pfam PF00009 Elongation factor Tu GTP binding domain 6 230 1.5E-48 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 Gene3D G3DSA:3.30.70.870 397 454 8.1E-11 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 Pfam PF03764 Elongation factor G, domain IV 456 569 7.8E-16 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 Gene3D G3DSA:3.40.50.300 6 152 8.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 SMART SM00889 456 570 3.5E-22 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 SMART SM00838 594 679 5.2E-8 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 2.5E-10 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 259 285 2.5E-10 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 207 229 2.5E-10 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 SUPERFAMILY SSF54980 594 682 6.71E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PANTHER PTHR23115 207 352 1.3E-90 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PANTHER PTHR23115 397 565 1.3E-90 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PANTHER PTHR23115 593 683 1.3E-90 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PANTHER PTHR23115 7 163 1.3E-90 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 Pfam PF00679 Elongation factor G C-terminus 594 677 4.0E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.7E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.7E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.7E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.7E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.7E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 Gene3D G3DSA:2.40.30.10 239 340 7.0E-17 T 22-04-2016 HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 SUPERFAMILY SSF54980 393 457 3.06E-11 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS05945 264096be65b827940fd874ba8e35ca0b 728 SUPERFAMILY SSF52540 6 230 4.98E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 Pfam PF13242 HAD-hyrolase-like 196 277 6.0E-19 T 22-04-2016 HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 SUPERFAMILY SSF56784 16 278 5.51E-53 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 Gene3D G3DSA:3.40.50.10410 99 194 1.1E-27 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 PANTHER PTHR19288:SF3 10 288 1.3E-68 T 22-04-2016 HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 Pfam PF13344 Haloacid dehalogenase-like hydrolase 20 119 1.7E-19 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 Gene3D G3DSA:3.40.50.1000 195 279 5.6E-33 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 Gene3D G3DSA:3.40.50.1000 13 92 5.6E-33 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 20 251 1.2E-31 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA HMPREF9228_RS05605 c6e0095360246c0cf837ced46ff3cbdd 348 PANTHER PTHR19288 10 288 1.3E-68 T 22-04-2016 HMPREF9228_RS02530 ee5dddf32b392f1b76f19e27580fa5d8 256 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS02530 ee5dddf32b392f1b76f19e27580fa5d8 256 PANTHER PTHR24220 17 256 5.4E-141 T 22-04-2016 HMPREF9228_RS02530 ee5dddf32b392f1b76f19e27580fa5d8 256 Gene3D G3DSA:3.40.50.300 14 251 3.0E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02530 ee5dddf32b392f1b76f19e27580fa5d8 256 SMART SM00382 40 234 1.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02530 ee5dddf32b392f1b76f19e27580fa5d8 256 Pfam PF00005 ABC transporter 31 179 1.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS02530 ee5dddf32b392f1b76f19e27580fa5d8 256 SUPERFAMILY SSF52540 15 249 8.05E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02530 ee5dddf32b392f1b76f19e27580fa5d8 256 PANTHER PTHR24220:SF474 17 256 5.4E-141 T 22-04-2016 HMPREF9228_RS02530 ee5dddf32b392f1b76f19e27580fa5d8 256 PIRSF PIRSF039085 12 255 7.8E-109 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 HMPREF9228_RS07105 ca81527c470ec5ee566c4cf00d666132 270 PANTHER PTHR33514:SF4 10 258 8.9E-35 T 22-04-2016 HMPREF9228_RS07105 ca81527c470ec5ee566c4cf00d666132 270 Pfam PF02361 Cobalt transport protein 11 218 1.1E-15 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component HMPREF9228_RS07105 ca81527c470ec5ee566c4cf00d666132 270 PANTHER PTHR33514 10 258 8.9E-35 T 22-04-2016 HMPREF9228_RS06045 0c8e85579747c402ab3e3fc43fb084bc 446 Pfam PF01554 MatE 28 188 3.5E-22 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS06045 0c8e85579747c402ab3e3fc43fb084bc 446 Pfam PF01554 MatE 259 403 1.3E-19 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS06045 0c8e85579747c402ab3e3fc43fb084bc 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 414 3.7E-56 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS06045 0c8e85579747c402ab3e3fc43fb084bc 446 PANTHER PTHR11206 9 441 2.9E-104 T 22-04-2016 HMPREF9228_RS06045 0c8e85579747c402ab3e3fc43fb084bc 446 PIRSF PIRSF006603 2 444 3.6E-79 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS06045 0c8e85579747c402ab3e3fc43fb084bc 446 PANTHER PTHR11206:SF132 9 441 2.9E-104 T 22-04-2016 HMPREF9228_RS08970 c7e5c9a0c8ea2e333e1b885c48061eeb 369 Gene3D G3DSA:3.20.20.190 112 353 4.6E-54 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 HMPREF9228_RS08970 c7e5c9a0c8ea2e333e1b885c48061eeb 369 Gene3D G3DSA:3.20.20.190 43 53 4.6E-54 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 HMPREF9228_RS08970 c7e5c9a0c8ea2e333e1b885c48061eeb 369 PANTHER PTHR23344 201 348 1.6E-21 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 HMPREF9228_RS08970 c7e5c9a0c8ea2e333e1b885c48061eeb 369 PANTHER PTHR23344 111 181 1.6E-21 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 HMPREF9228_RS08970 c7e5c9a0c8ea2e333e1b885c48061eeb 369 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 113 348 6.8E-21 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 HMPREF9228_RS08970 c7e5c9a0c8ea2e333e1b885c48061eeb 369 SUPERFAMILY SSF51695 110 182 2.88E-40 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 HMPREF9228_RS08970 c7e5c9a0c8ea2e333e1b885c48061eeb 369 SUPERFAMILY SSF51695 212 349 2.88E-40 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 HMPREF9228_RS06095 6663e07b1aec6e855a65b49243ea921a 305 SMART SM00382 47 250 4.2E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06095 6663e07b1aec6e855a65b49243ea921a 305 PANTHER PTHR24220 21 283 1.1E-101 T 22-04-2016 HMPREF9228_RS06095 6663e07b1aec6e855a65b49243ea921a 305 SUPERFAMILY SSF52540 20 271 1.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06095 6663e07b1aec6e855a65b49243ea921a 305 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS06095 6663e07b1aec6e855a65b49243ea921a 305 PANTHER PTHR24220:SF535 21 283 1.1E-101 T 22-04-2016 HMPREF9228_RS06095 6663e07b1aec6e855a65b49243ea921a 305 Gene3D G3DSA:3.40.50.300 18 274 1.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06095 6663e07b1aec6e855a65b49243ea921a 305 Pfam PF00005 ABC transporter 39 200 6.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 SUPERFAMILY SSF51735 2 148 5.71E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 316 39.03 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 SUPERFAMILY SSF56327 147 314 7.78E-51 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 22-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 1.5E-29 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 PIRSF PIRSF000102 3 315 4.2E-102 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 PANTHER PTHR11540 3 315 4.6E-112 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 Gene3D G3DSA:3.90.110.10 149 315 2.5E-54 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 Gene3D G3DSA:3.40.50.720 7 148 4.6E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 PANTHER PTHR11540:SF3 3 315 4.6E-112 T 22-04-2016 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 309 6.2E-101 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 3.0E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 3.0E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 3.0E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 3.0E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 3.0E-39 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS04170 78b86955e2685a85b37aa08fa4f43af7 316 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 310 5.8E-27 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 HMPREF9228_RS02095 d5f86ad2e2fbbe4fdc12fa11dea4b3c4 315 PANTHER PTHR32243 26 314 3.9E-75 T 22-04-2016 HMPREF9228_RS02095 d5f86ad2e2fbbe4fdc12fa11dea4b3c4 315 PANTHER PTHR32243:SF13 26 314 3.9E-75 T 22-04-2016 HMPREF9228_RS02095 d5f86ad2e2fbbe4fdc12fa11dea4b3c4 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 302 1.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02095 d5f86ad2e2fbbe4fdc12fa11dea4b3c4 315 Gene3D G3DSA:1.10.3720.10 26 306 4.6E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02095 d5f86ad2e2fbbe4fdc12fa11dea4b3c4 315 SUPERFAMILY SSF161098 30 311 2.22E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 SUPERFAMILY SSF52317 17 297 9.16E-82 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 46.568 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 Pfam PF04204 Homoserine O-succinyltransferase 2 299 5.3E-119 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 PANTHER PTHR20919:SF0 2 313 5.1E-118 T 22-04-2016 HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 PIRSF PIRSF000450 1 308 3.5E-120 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 293 2.0E-153 T 22-04-2016 HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 2.4E-107 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 PANTHER PTHR20919 2 313 5.1E-118 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 HMPREF9228_RS01555 ba2d2dc263c4527815b86bb5f18a0549 344 Gene3D G3DSA:3.40.50.880 34 301 5.6E-106 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS08735 c4a11d27bf335a8879f3b9575043e4ba 420 SUPERFAMILY SSF88713 224 398 2.72E-21 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 HMPREF9228_RS08735 c4a11d27bf335a8879f3b9575043e4ba 420 PANTHER PTHR34216 202 419 8.5E-27 T 22-04-2016 HMPREF9228_RS08735 c4a11d27bf335a8879f3b9575043e4ba 420 Pfam PF01522 Polysaccharide deacetylase 260 381 4.0E-14 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 HMPREF9228_RS08735 c4a11d27bf335a8879f3b9575043e4ba 420 Pfam PF16403 Domain of unknown function (DUF5011) 121 191 3.5E-20 T 22-04-2016 IPR032179 Domain of unknown function DUF5011 HMPREF9228_RS08735 c4a11d27bf335a8879f3b9575043e4ba 420 Gene3D G3DSA:3.20.20.370 232 385 7.5E-16 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 Gene3D G3DSA:3.40.50.720 2 174 6.7E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 SMART SM00846 3 166 2.4E-84 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 PIRSF PIRSF000149 1 352 1.1E-103 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 245 262 6.0E-27 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 187 203 6.0E-27 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 123 136 6.0E-27 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 160 178 6.0E-27 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 283 298 6.0E-27 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 SUPERFAMILY SSF51735 3 182 1.97E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 SUPERFAMILY SSF55347 165 317 4.46E-50 T 22-04-2016 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 Gene3D G3DSA:3.30.360.10 175 332 4.9E-52 T 22-04-2016 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 PANTHER PTHR10836 1 352 1.8E-155 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 172 317 2.8E-46 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 342 2.9E-117 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 PANTHER PTHR10836:SF57 1 352 1.8E-155 T 22-04-2016 HMPREF9228_RS03080 2f96b6091a8d8b66dd9116e174e41289 352 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 166 3.5E-51 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 HMPREF9228_RS00350 a7d6c606792bfdcaef0ffa0c544cc618 363 PANTHER PTHR11614:SF100 82 354 2.7E-31 T 22-04-2016 HMPREF9228_RS00350 a7d6c606792bfdcaef0ffa0c544cc618 363 PANTHER PTHR11614 82 354 2.7E-31 T 22-04-2016 HMPREF9228_RS00350 a7d6c606792bfdcaef0ffa0c544cc618 363 SUPERFAMILY SSF53474 82 196 2.38E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00350 a7d6c606792bfdcaef0ffa0c544cc618 363 SUPERFAMILY SSF53474 280 353 2.38E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00350 a7d6c606792bfdcaef0ffa0c544cc618 363 Pfam PF12146 Serine aminopeptidase, S33 82 335 3.7E-37 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 HMPREF9228_RS00350 a7d6c606792bfdcaef0ffa0c544cc618 363 Gene3D G3DSA:3.40.50.1820 58 336 4.4E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 ProSitePatterns PS00221 MIP family signature. 67 75 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 Gene3D G3DSA:1.20.1080.10 3 260 1.0E-39 T 22-04-2016 IPR023271 Aquaporin-like HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 PANTHER PTHR19139:SF103 2 307 1.5E-30 T 22-04-2016 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 PANTHER PTHR19139 2 307 1.5E-30 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 PRINTS PR00783 Major intrinsic protein family signature 153 171 2.3E-28 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 PRINTS PR00783 Major intrinsic protein family signature 228 248 2.3E-28 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 PRINTS PR00783 Major intrinsic protein family signature 49 73 2.3E-28 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 PRINTS PR00783 Major intrinsic protein family signature 11 30 2.3E-28 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 PRINTS PR00783 Major intrinsic protein family signature 86 105 2.3E-28 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 PRINTS PR00783 Major intrinsic protein family signature 184 206 2.3E-28 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 SUPERFAMILY SSF81338 10 252 1.09E-38 T 22-04-2016 IPR023271 Aquaporin-like HMPREF9228_RS04020 5cf765c6c7432e89ebb3900f5d42e001 312 Pfam PF00230 Major intrinsic protein 12 244 4.8E-28 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS03220 53799fc72affadc27cd8d84eeaf99012 270 Pfam PF00005 ABC transporter 44 190 1.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS03220 53799fc72affadc27cd8d84eeaf99012 270 PANTHER PTHR24220 26 258 7.4E-121 T 22-04-2016 HMPREF9228_RS03220 53799fc72affadc27cd8d84eeaf99012 270 SMART SM00382 53 239 5.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03220 53799fc72affadc27cd8d84eeaf99012 270 Gene3D G3DSA:3.40.50.300 28 246 1.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03220 53799fc72affadc27cd8d84eeaf99012 270 SUPERFAMILY SSF52540 27 244 1.21E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03220 53799fc72affadc27cd8d84eeaf99012 270 PANTHER PTHR24220:SF484 26 258 7.4E-121 T 22-04-2016 HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 SUPERFAMILY SSF52540 378 566 1.18E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 SUPERFAMILY SSF52540 334 349 1.18E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 SUPERFAMILY SSF52540 116 235 1.18E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 SUPERFAMILY SSF52540 1 82 1.18E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 612 3.2E-130 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 PANTHER PTHR11059 455 613 4.6E-101 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 PANTHER PTHR11059 106 435 4.6E-101 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 PANTHER PTHR11059 2 78 4.6E-101 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 Gene3D G3DSA:3.40.50.300 483 563 4.4E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 Pfam PF13476 AAA domain 5 51 1.5E-8 T 22-04-2016 HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 PIRSF PIRSF003128 1 616 1.6E-136 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 Gene3D G3DSA:3.40.50.300 1 70 1.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05580 88f0ebcff4aafa2dec933cf46c47bd9b 616 Gene3D G3DSA:3.40.50.300 108 236 1.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05665 152ba22cb21582f14e63b8d35b4d1af9 91 PANTHER PTHR38039 1 89 1.8E-25 T 22-04-2016 HMPREF9228_RS05665 152ba22cb21582f14e63b8d35b4d1af9 91 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 88 2.8E-26 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 HMPREF9228_RS05665 152ba22cb21582f14e63b8d35b4d1af9 91 PANTHER PTHR38039:SF1 1 89 1.8E-25 T 22-04-2016 HMPREF9228_RS05665 152ba22cb21582f14e63b8d35b4d1af9 91 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 88 5.6E-33 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 HMPREF9228_RS05665 152ba22cb21582f14e63b8d35b4d1af9 91 SUPERFAMILY SSF143011 1 87 1.7E-24 T 22-04-2016 HMPREF9228_RS02395 9141cd82dd39f3888477e3069c02dac2 526 Gene3D G3DSA:3.40.50.1820 285 392 1.2E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS02395 9141cd82dd39f3888477e3069c02dac2 526 SUPERFAMILY SSF53474 272 385 6.16E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS02395 9141cd82dd39f3888477e3069c02dac2 526 Pfam PF12697 Alpha/beta hydrolase family 283 417 5.0E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 138 155 1.9E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 47 68 1.9E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 113 129 1.9E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 81 99 1.9E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 Gene3D G3DSA:3.20.20.70 13 301 1.1E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 50 67 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 143 173 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 PIRSF PIRSF001365 10 301 8.2E-74 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 SUPERFAMILY SSF51569 13 301 4.61E-82 T 22-04-2016 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 SMART SM01130 13 299 2.5E-106 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 PANTHER PTHR12128 1 301 1.9E-96 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 Pfam PF00701 Dihydrodipicolinate synthetase family 14 281 1.4E-75 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 PANTHER PTHR12128:SF34 1 301 1.9E-96 T 22-04-2016 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 17 285 5.0E-78 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06720 2c951d0d9431e09f7885bfeffcd3faf5 301 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 13 297 51.591 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PRINTS PR00174 LacY proton/sugar symporter family signature 226 254 1.6E-67 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PRINTS PR00174 LacY proton/sugar symporter family signature 273 294 1.6E-67 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PRINTS PR00174 LacY proton/sugar symporter family signature 114 136 1.6E-67 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PRINTS PR00174 LacY proton/sugar symporter family signature 76 105 1.6E-67 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PRINTS PR00174 LacY proton/sugar symporter family signature 328 347 1.6E-67 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PRINTS PR00174 LacY proton/sugar symporter family signature 156 174 1.6E-67 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PRINTS PR00174 LacY proton/sugar symporter family signature 359 379 1.6E-67 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PRINTS PR00174 LacY proton/sugar symporter family signature 297 323 1.6E-67 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 Gene3D G3DSA:1.20.1250.20 220 421 1.6E-37 T 22-04-2016 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 Gene3D G3DSA:1.20.1250.20 6 212 3.6E-33 T 22-04-2016 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 PANTHER PTHR23522 5 432 5.2E-32 T 22-04-2016 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 Pfam PF01306 LacY proton/sugar symporter 10 418 4.6E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 SUPERFAMILY SSF103473 11 416 1.05E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02645 c239b11e2c6ec6cbf08633063a6a7130 441 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 13 413 9.6E-103 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 SMART SM00937 84 194 6.0E-52 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 SUPERFAMILY SSF75620 29 366 4.19E-119 T 22-04-2016 HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 363 9.0E-143 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 Gene3D G3DSA:1.20.58.410 2 115 4.1E-29 T 22-04-2016 HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 Gene3D G3DSA:3.30.160.20 228 305 1.6E-31 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 Pfam PF00472 RF-1 domain 229 336 9.0E-35 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 PANTHER PTHR11075:SF6 4 371 2.1E-140 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 PANTHER PTHR11075 4 371 2.1E-140 T 22-04-2016 HMPREF9228_RS06690 bc5818ff89bc58dfd735059d165faecc 374 Pfam PF03462 PCRF domain 30 219 2.9E-58 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 SUPERFAMILY SSF51306 118 235 1.43E-34 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 Gene3D G3DSA:2.10.109.10 118 237 1.1E-43 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 SUPERFAMILY SSF46785 16 83 1.26E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 PANTHER PTHR33516 13 89 1.9E-80 T 22-04-2016 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 Pfam PF01726 LexA DNA binding domain 15 78 2.6E-23 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 PANTHER PTHR33516:SF2 13 89 1.9E-80 T 22-04-2016 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 Pfam PF00717 Peptidase S24-like 156 220 6.2E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 192 204 2.5E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 163 2.5E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 164 175 2.5E-10 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 PANTHER PTHR33516 110 237 1.9E-80 T 22-04-2016 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 PANTHER PTHR33516:SF2 110 237 1.9E-80 T 22-04-2016 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 Hamap MF_00015 LexA repressor [lexA]. 16 237 32.598 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 Gene3D G3DSA:1.10.10.10 16 82 3.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02890 b476badb60499b5f1f90916a33d902f1 237 TIGRFAM TIGR00498 lexA: repressor LexA 15 237 2.2E-68 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 480 491 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 SUPERFAMILY SSF143975 3 390 3.27E-122 T 22-04-2016 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 Pfam PF00920 Dehydratase family 4 575 7.7E-206 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 SUPERFAMILY SSF52016 392 579 4.16E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 3 578 6.6E-220 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 PANTHER PTHR21000 377 583 5.5E-284 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 PANTHER PTHR21000 3 341 5.5E-284 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 92 102 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 PANTHER PTHR21000:SF11 377 583 5.5E-284 T 22-04-2016 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 PANTHER PTHR21000:SF11 3 341 5.5E-284 T 22-04-2016 HMPREF9228_RS02285 be94cdf740f6f8e8c2b95ad441dcf1ea 589 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 578 40.856 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 28 431 45.052 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 Pfam PF02222 ATP-grasp domain 143 329 1.9E-45 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 SUPERFAMILY SSF51246 361 430 9.26E-12 T 22-04-2016 IPR011054 Rudiment single hybrid motif HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 Gene3D G3DSA:3.40.50.20 27 138 6.2E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 PANTHER PTHR11609:SF7 14 432 2.4E-150 T 22-04-2016 HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 Gene3D G3DSA:3.30.1490.20 143 220 1.1E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 SUPERFAMILY SSF56059 133 347 4.42E-48 T 22-04-2016 HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 Gene3D G3DSA:3.30.470.20 223 427 2.0E-61 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 SUPERFAMILY SSF52440 24 132 8.06E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS06230 779315f9f06224fe025f4fa0b906dd18 433 PANTHER PTHR11609 14 432 2.4E-150 T 22-04-2016 HMPREF9228_RS09685 6689bd7f4c40374f176d41fe52d383c9 325 SUPERFAMILY SSF52833 114 278 3.69E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS09685 6689bd7f4c40374f176d41fe52d383c9 325 Gene3D G3DSA:3.40.30.10 112 282 1.5E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS01115 e286881ece1b38eb87d937d1c323fa1c 609 PANTHER PTHR31632:SF4 311 568 4.7E-72 T 22-04-2016 HMPREF9228_RS01115 e286881ece1b38eb87d937d1c323fa1c 609 PANTHER PTHR31632 311 568 4.7E-72 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 HMPREF9228_RS01115 e286881ece1b38eb87d937d1c323fa1c 609 Pfam PF03239 Iron permease FTR1 family 448 539 4.0E-8 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 HMPREF9228_RS01115 e286881ece1b38eb87d937d1c323fa1c 609 Pfam PF03239 Iron permease FTR1 family 308 436 2.6E-17 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 SUPERFAMILY SSF46785 16 76 5.52E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 Pfam PF00480 ROK family 89 389 3.7E-52 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 PANTHER PTHR18964:SF123 63 395 1.2E-53 T 22-04-2016 HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 Gene3D G3DSA:3.30.420.40 225 374 8.2E-45 T 22-04-2016 HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 PANTHER PTHR18964 63 395 1.2E-53 T 22-04-2016 HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 ProSitePatterns PS01125 ROK family signature. 218 245 - T 22-04-2016 IPR000600 ROK family HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 Gene3D G3DSA:1.10.10.10 14 81 9.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 Gene3D G3DSA:3.30.420.40 84 224 1.5E-25 T 22-04-2016 HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 Pfam PF13412 Winged helix-turn-helix DNA-binding 20 62 5.7E-5 T 22-04-2016 HMPREF9228_RS02990 bb0b9fffc3a2b42697b2775ce630c545 404 SUPERFAMILY SSF53067 87 393 1.62E-41 T 22-04-2016 HMPREF9228_RS03755 f608869dba1bed5e01f45aa5264507a9 147 PANTHER PTHR11019 2 140 2.2E-28 T 22-04-2016 HMPREF9228_RS03755 f608869dba1bed5e01f45aa5264507a9 147 Pfam PF01965 DJ-1/PfpI family 18 142 8.2E-31 T 22-04-2016 IPR002818 DJ-1/PfpI HMPREF9228_RS03755 f608869dba1bed5e01f45aa5264507a9 147 Gene3D G3DSA:3.40.50.880 1 146 3.2E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS03755 f608869dba1bed5e01f45aa5264507a9 147 SUPERFAMILY SSF52317 13 146 5.73E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS03755 f608869dba1bed5e01f45aa5264507a9 147 PANTHER PTHR11019:SF115 2 140 2.2E-28 T 22-04-2016 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 430 441 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 371 385 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 164 172 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 198 211 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 274 287 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 212 227 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 288 301 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 140 153 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PRINTS PR00415 Aconitase family signature 492 505 5.12E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 SUPERFAMILY SSF53732 13 626 6.15E-220 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 898 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 Gene3D G3DSA:3.40.1060.10 245 366 2.7E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 ProSitePatterns PS00450 Aconitase family signature 1. 426 442 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 Gene3D G3DSA:3.30.499.10 25 244 5.3E-78 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 ProSitePatterns PS01244 Aconitase family signature 2. 492 505 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PANTHER PTHR11670:SF1 755 899 0.0 T 22-04-2016 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PANTHER PTHR11670:SF1 5 392 0.0 T 22-04-2016 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PANTHER PTHR11670:SF1 666 711 0.0 T 22-04-2016 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PANTHER PTHR11670:SF1 415 650 0.0 T 22-04-2016 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PANTHER PTHR11670 755 899 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PANTHER PTHR11670 5 392 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PANTHER PTHR11670 666 711 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 PANTHER PTHR11670 415 650 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 Pfam PF00330 Aconitase family (aconitate hydratase) 63 561 5.6E-178 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 Pfam PF00694 Aconitase C-terminal domain 691 823 5.7E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 SUPERFAMILY SSF52016 630 898 1.41E-80 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 Gene3D G3DSA:3.20.19.10 636 898 4.7E-73 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel HMPREF9228_RS03280 605e386bf680dc64229ba1c3e8601d96 899 Gene3D G3DSA:3.30.499.10 368 574 4.9E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 PANTHER PTHR36447 17 691 2.5E-202 T 22-04-2016 HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 SUPERFAMILY SSF51445 12 377 1.06E-106 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 PIRSF PIRSF001084 11 691 3.5E-265 T 22-04-2016 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 Gene3D G3DSA:3.20.20.80 21 398 1.4E-119 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 Pfam PF08533 Beta-galactosidase C-terminal domain 632 690 1.2E-5 T 22-04-2016 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 PANTHER PTHR36447:SF1 17 691 2.5E-202 T 22-04-2016 HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 Pfam PF02449 Beta-galactosidase 24 396 9.0E-143 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 Pfam PF08532 Beta-galactosidase trimerisation domain 410 620 1.3E-51 T 22-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 Gene3D G3DSA:3.40.50.880 407 622 3.2E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS06620 909025b0ed1bdc0aba1a3f04d20b7bac 691 SUPERFAMILY SSF52317 406 621 1.01E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 PANTHER PTHR33121 21 292 3.2E-59 T 22-04-2016 HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 SUPERFAMILY SSF55073 441 575 4.32E-24 T 22-04-2016 IPR029787 Nucleotide cyclase HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 Pfam PF00563 EAL domain 21 256 3.4E-58 T 22-04-2016 IPR001633 EAL domain HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 SUPERFAMILY SSF141868 20 269 1.83E-72 T 22-04-2016 IPR001633 EAL domain HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 438 574 6.4E-16 T 22-04-2016 IPR000160 GGDEF domain HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 SMART SM00052 15 261 2.1E-67 T 22-04-2016 IPR001633 EAL domain HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 PANTHER PTHR33121:SF13 21 292 3.2E-59 T 22-04-2016 HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 Gene3D G3DSA:3.30.70.270 438 575 5.2E-26 T 22-04-2016 HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 Pfam PF00990 Diguanylate cyclase, GGDEF domain 438 575 1.9E-20 T 22-04-2016 IPR000160 GGDEF domain HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 Gene3D G3DSA:3.20.20.450 21 268 3.7E-76 T 22-04-2016 IPR001633 EAL domain HMPREF9228_RS00165 e0874261cdc94c10af52fd5f35966cf4 752 SMART SM00267 421 587 3.6E-12 T 22-04-2016 IPR000160 GGDEF domain HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 PANTHER PTHR10359 7 217 3.2E-77 T 22-04-2016 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 Gene3D G3DSA:1.10.1670.10 129 216 1.3E-31 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 Pfam PF00633 Helix-hairpin-helix motif 105 132 6.1E-10 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 SMART SM00525 197 217 0.0011 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 PIRSF PIRSF001435 3 222 1.2E-49 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 ProSitePatterns PS01155 Endonuclease III family signature. 108 137 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 178 2.0E-22 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 SMART SM00478 44 196 4.2E-61 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 TIGRFAM TIGR01083 nth: endonuclease III 12 205 3.8E-70 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 Gene3D G3DSA:1.10.340.30 28 128 4.1E-36 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 Hamap MF_00942 Endonuclease III [nth]. 1 220 37.576 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 HMPREF9228_RS01515 44465eb86ab9c2fce175919e85c2e461 222 SUPERFAMILY SSF48150 13 216 3.77E-69 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 Gene3D G3DSA:1.20.58.220 123 214 2.3E-15 T 22-04-2016 HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 Gene3D G3DSA:1.20.58.220 1 106 1.3E-30 T 22-04-2016 HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 208 3.9E-47 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 Pfam PF01895 PhoU domain 16 103 4.9E-20 T 22-04-2016 IPR026022 PhoU domain HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 Pfam PF01895 PhoU domain 123 202 2.2E-8 T 22-04-2016 IPR026022 PhoU domain HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 PANTHER PTHR10010 1 224 2.2E-45 T 22-04-2016 HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 PANTHER PTHR10010:SF14 1 224 2.2E-45 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 SUPERFAMILY SSF109755 4 217 2.62E-52 T 22-04-2016 HMPREF9228_RS07850 9a41f2be8730dcb23d2eca8915acc555 224 PIRSF PIRSF003107 1 215 9.6E-49 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 HMPREF9228_RS07070 1570987c1b07cdea8b7be1122fab05ac 401 Gene3D G3DSA:1.20.1090.10 187 392 1.6E-46 T 22-04-2016 HMPREF9228_RS07070 1570987c1b07cdea8b7be1122fab05ac 401 PANTHER PTHR11496:SF65 1 397 2.8E-91 T 22-04-2016 HMPREF9228_RS07070 1570987c1b07cdea8b7be1122fab05ac 401 SUPERFAMILY SSF56796 3 394 1.31E-93 T 22-04-2016 HMPREF9228_RS07070 1570987c1b07cdea8b7be1122fab05ac 401 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 364 1.7E-84 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 HMPREF9228_RS07070 1570987c1b07cdea8b7be1122fab05ac 401 Gene3D G3DSA:3.40.50.1970 1 186 3.2E-55 T 22-04-2016 HMPREF9228_RS07070 1570987c1b07cdea8b7be1122fab05ac 401 PANTHER PTHR11496 1 397 2.8E-91 T 22-04-2016 HMPREF9228_RS03615 46fe06dcec1787ef8bc3d3c8d7c709c4 199 SUPERFAMILY SSF55729 18 152 2.92E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS03615 46fe06dcec1787ef8bc3d3c8d7c709c4 199 PANTHER PTHR23091 17 156 6.3E-25 T 22-04-2016 HMPREF9228_RS03615 46fe06dcec1787ef8bc3d3c8d7c709c4 199 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 15 148 5.4E-31 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 HMPREF9228_RS03615 46fe06dcec1787ef8bc3d3c8d7c709c4 199 Pfam PF00583 Acetyltransferase (GNAT) family 57 129 3.3E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS03615 46fe06dcec1787ef8bc3d3c8d7c709c4 199 Gene3D G3DSA:3.40.630.30 17 153 3.6E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 Pfam PF00171 Aldehyde dehydrogenase family 15 298 6.1E-17 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 PIRSF PIRSF000151 5 431 1.2E-171 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 12 430 39.525 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 PANTHER PTHR11063:SF8 15 431 9.0E-163 T 22-04-2016 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 Gene3D G3DSA:3.40.605.10 389 430 1.2E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 Gene3D G3DSA:3.40.605.10 8 231 1.2E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 PANTHER PTHR11063 15 431 9.0E-163 T 22-04-2016 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 337 359 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 21 420 6.9E-139 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 Gene3D G3DSA:3.40.309.10 233 388 2.2E-40 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 HMPREF9228_RS05535 dd27bd1b70021589727a770a37df6685 431 SUPERFAMILY SSF53720 13 430 3.53E-107 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 Gene3D G3DSA:3.40.50.720 2 80 3.5E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 SUPERFAMILY SSF53623 99 320 1.57E-41 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 7 472 2.2E-99 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 PANTHER PTHR23135:SF2 1 476 3.5E-102 T 22-04-2016 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 SUPERFAMILY SSF51984 2 81 1.44E-12 T 22-04-2016 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 PANTHER PTHR23135 1 476 3.5E-102 T 22-04-2016 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 Pfam PF08245 Mur ligase middle domain 106 243 3.9E-22 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 SUPERFAMILY SSF53244 325 473 3.11E-29 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 Gene3D G3DSA:3.40.1190.10 83 322 2.9E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 Gene3D G3DSA:3.90.190.20 325 470 5.9E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS02950 61d1a087677c49b778cd6b3b39330fcc 481 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 474 30.661 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 Gene3D G3DSA:1.20.272.10 249 365 4.3E-9 T 22-04-2016 HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 235 365 6.7E-9 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 Gene3D G3DSA:1.10.8.60 167 244 9.9E-20 T 22-04-2016 HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 SMART SM00382 36 177 5.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 SUPERFAMILY SSF52540 30 224 8.19E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 Pfam PF13177 DNA polymerase III, delta subunit 20 177 4.3E-37 T 22-04-2016 HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 PANTHER PTHR11669:SF0 1 368 6.0E-134 T 22-04-2016 HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 4 362 2.2E-112 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 SUPERFAMILY SSF48019 249 365 2.72E-14 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 Gene3D G3DSA:3.40.50.300 14 166 6.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00680 7cc91ac6029f4768a3d2dade2d60b790 910 PANTHER PTHR11669 1 368 6.0E-134 T 22-04-2016 HMPREF9228_RS05525 091b2fb2ee09a36e91f3da479a60daff 242 Gene3D G3DSA:3.40.50.620 49 240 3.7E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS05525 091b2fb2ee09a36e91f3da479a60daff 242 SUPERFAMILY SSF52374 49 238 5.32E-52 T 22-04-2016 HMPREF9228_RS05525 091b2fb2ee09a36e91f3da479a60daff 242 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 52 238 1.5E-52 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 HMPREF9228_RS05525 091b2fb2ee09a36e91f3da479a60daff 242 PANTHER PTHR12039 49 238 3.0E-46 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 HMPREF9228_RS05525 091b2fb2ee09a36e91f3da479a60daff 242 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 50 114 6.8E-10 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 HMPREF9228_RS05525 091b2fb2ee09a36e91f3da479a60daff 242 Pfam PF01467 Cytidylyltransferase-like 52 213 1.1E-26 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 HMPREF9228_RS05525 091b2fb2ee09a36e91f3da479a60daff 242 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 48 239 29.638 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 SMART SM00359 286 369 1.3E-12 T 22-04-2016 IPR002478 PUA domain GO:0003723 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 PRINTS PR00474 Glutamate 5-kinase family signature 54 68 7.1E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 PRINTS PR00474 Glutamate 5-kinase family signature 160 187 7.1E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 PRINTS PR00474 Glutamate 5-kinase family signature 128 149 7.1E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 PRINTS PR00474 Glutamate 5-kinase family signature 88 116 7.1E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 PRINTS PR00474 Glutamate 5-kinase family signature 221 241 7.1E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 PIRSF PIRSF000729 12 377 2.5E-117 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 Gene3D G3DSA:3.40.1160.10 18 265 6.4E-54 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 SUPERFAMILY SSF53633 18 265 5.11E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 219 236 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 PANTHER PTHR11063:SF12 7 377 1.3E-100 T 22-04-2016 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 17 267 33.391 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 Gene3D G3DSA:2.30.130.10 283 375 3.5E-23 T 22-04-2016 IPR015947 PUA-like domain HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 18 375 2.1E-120 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 Pfam PF00696 Amino acid kinase family 18 246 1.1E-37 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 Pfam PF01472 PUA domain 286 360 1.1E-17 T 22-04-2016 IPR002478 PUA domain GO:0003723 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 PANTHER PTHR11063 7 377 1.3E-100 T 22-04-2016 HMPREF9228_RS08740 92448795c0f910eae5ec991342044e68 377 SUPERFAMILY SSF88697 285 376 2.1E-19 T 22-04-2016 IPR015947 PUA-like domain HMPREF9228_RS03180 28f2d2c11d6c1ec1a7f4783dde9bddba 253 Gene3D G3DSA:3.40.50.300 16 236 2.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03180 28f2d2c11d6c1ec1a7f4783dde9bddba 253 SUPERFAMILY SSF52540 17 238 9.58E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03180 28f2d2c11d6c1ec1a7f4783dde9bddba 253 PANTHER PTHR24220:SF578 18 237 7.7E-92 T 22-04-2016 HMPREF9228_RS03180 28f2d2c11d6c1ec1a7f4783dde9bddba 253 SMART SM00382 45 232 4.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03180 28f2d2c11d6c1ec1a7f4783dde9bddba 253 Pfam PF00005 ABC transporter 37 184 5.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS03180 28f2d2c11d6c1ec1a7f4783dde9bddba 253 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS03180 28f2d2c11d6c1ec1a7f4783dde9bddba 253 PANTHER PTHR24220 18 237 7.7E-92 T 22-04-2016 HMPREF9228_RS01625 c39e7737a45ff0c83fd764f15005d3a1 208 PANTHER PTHR40114 72 186 1.4E-14 T 22-04-2016 HMPREF9228_RS01625 c39e7737a45ff0c83fd764f15005d3a1 208 Gene3D G3DSA:2.40.320.10 7 180 7.0E-36 T 22-04-2016 IPR023577 CYTH domain HMPREF9228_RS01625 c39e7737a45ff0c83fd764f15005d3a1 208 SMART SM01118 7 177 6.8E-6 T 22-04-2016 IPR023577 CYTH domain HMPREF9228_RS01625 c39e7737a45ff0c83fd764f15005d3a1 208 SUPERFAMILY SSF55154 9 176 4.58E-18 T 22-04-2016 IPR033469 CYTH-like domain HMPREF9228_RS08455 e6afe34f8328e3399eeb7f64238835ab 317 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 315 5.7E-95 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 HMPREF9228_RS08455 e6afe34f8328e3399eeb7f64238835ab 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 311 2.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08455 e6afe34f8328e3399eeb7f64238835ab 317 SUPERFAMILY SSF161098 29 308 3.27E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08455 e6afe34f8328e3399eeb7f64238835ab 317 PANTHER PTHR30425 15 316 1.2E-93 T 22-04-2016 HMPREF9228_RS08455 e6afe34f8328e3399eeb7f64238835ab 317 Gene3D G3DSA:1.10.3720.10 22 314 3.2E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08455 e6afe34f8328e3399eeb7f64238835ab 317 PANTHER PTHR30425:SF1 15 316 1.2E-93 T 22-04-2016 HMPREF9228_RS06110 8ea3a9b82b62420489ad330f147875b4 572 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 469 4.6E-66 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain HMPREF9228_RS06110 8ea3a9b82b62420489ad330f147875b4 572 Gene3D G3DSA:3.40.190.10 200 315 3.9E-30 T 22-04-2016 HMPREF9228_RS06110 8ea3a9b82b62420489ad330f147875b4 572 PIRSF PIRSF002741 4 560 8.9E-74 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 HMPREF9228_RS06110 8ea3a9b82b62420489ad330f147875b4 572 SUPERFAMILY SSF53850 36 559 4.94E-99 T 22-04-2016 HMPREF9228_RS06110 8ea3a9b82b62420489ad330f147875b4 572 Gene3D G3DSA:3.90.76.10 54 199 7.7E-25 T 22-04-2016 HMPREF9228_RS06110 8ea3a9b82b62420489ad330f147875b4 572 Gene3D G3DSA:3.10.105.10 316 527 2.0E-47 T 22-04-2016 HMPREF9228_RS06110 8ea3a9b82b62420489ad330f147875b4 572 PANTHER PTHR30290 2 572 1.9E-96 T 22-04-2016 HMPREF9228_RS05565 ed82e9fa06108e40c15b27ad22c8a836 124 Gene3D G3DSA:1.10.10.10 7 69 1.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS05565 ed82e9fa06108e40c15b27ad22c8a836 124 SMART SM00345 17 76 7.2E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS05565 ed82e9fa06108e40c15b27ad22c8a836 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.5E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS05565 ed82e9fa06108e40c15b27ad22c8a836 124 PANTHER PTHR38445:SF2 1 119 6.3E-19 T 22-04-2016 HMPREF9228_RS05565 ed82e9fa06108e40c15b27ad22c8a836 124 Gene3D G3DSA:3.40.1410.10 70 94 3.3E-4 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain HMPREF9228_RS05565 ed82e9fa06108e40c15b27ad22c8a836 124 PANTHER PTHR38445 1 119 6.3E-19 T 22-04-2016 HMPREF9228_RS05565 ed82e9fa06108e40c15b27ad22c8a836 124 SUPERFAMILY SSF46785 6 80 3.73E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 SUPERFAMILY SSF52374 1 154 4.79E-38 T 22-04-2016 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 3.4E-30 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 3.4E-30 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 3.4E-30 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 3.4E-30 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 8.4E-17 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 5.2E-51 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 Gene3D G3DSA:3.40.50.620 1 157 8.0E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 Pfam PF01467 Cytidylyltransferase-like 6 133 8.2E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 159 30.549 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 PANTHER PTHR21342 1 163 1.1E-58 T 22-04-2016 HMPREF9228_RS01975 e3c834156d2bd3344db673df591a97bf 166 PANTHER PTHR21342:SF1 1 163 1.1E-58 T 22-04-2016 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Pfam PF00128 Alpha amylase, catalytic domain 104 363 2.0E-19 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Pfam PF00128 Alpha amylase, catalytic domain 1124 1218 2.4E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Pfam PF00128 Alpha amylase, catalytic domain 1244 1328 2.9E-4 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SMART SM01066 531 608 1.1E-13 T 22-04-2016 IPR005085 Carbohydrate binding module family 25 GO:2001070 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Gene3D G3DSA:3.20.20.80 1073 1501 1.3E-91 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Gene3D G3DSA:3.20.20.80 52 418 2.1E-88 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PANTHER PTHR10357:SF99 948 1308 7.7E-149 T 22-04-2016 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PANTHER PTHR10357:SF99 1325 1548 7.7E-149 T 22-04-2016 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Pfam PF03714 Bacterial pullanase-associated domain 747 856 1.2E-15 T 22-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Pfam PF03714 Bacterial pullanase-associated domain 634 723 8.7E-10 T 22-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PANTHER PTHR10357 948 1308 7.7E-149 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PANTHER PTHR10357 1325 1548 7.7E-149 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SMART SM00642 52 413 5.4E-61 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SUPERFAMILY SSF51445 1072 1501 3.33E-115 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SMART SM00632 422 502 6.7E-22 T 22-04-2016 IPR031319 Alpha-amylase, C-terminal domain HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Gene3D G3DSA:2.60.40.10 951 1057 2.8E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Gene3D G3DSA:2.60.40.1180 1515 1575 7.4E-4 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Gene3D G3DSA:2.60.40.1180 420 501 2.5E-21 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PRINTS PR00110 Alpha-amylase signature 127 138 1.24E-13 T 22-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PRINTS PR00110 Alpha-amylase signature 221 232 1.24E-13 T 22-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PRINTS PR00110 Alpha-amylase signature 318 330 1.24E-13 T 22-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PRINTS PR00110 Alpha-amylase signature 95 112 1.24E-13 T 22-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 PRINTS PR00110 Alpha-amylase signature 256 274 1.24E-13 T 22-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SUPERFAMILY SSF51011 418 501 5.52E-22 T 22-04-2016 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SUPERFAMILY SSF49452 747 857 7.52E-18 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SUPERFAMILY SSF81296 953 1058 1.17E-17 T 22-04-2016 IPR014756 Immunoglobulin E-set HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 960 1043 3.9E-13 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 949 1564 3.4E-217 T 22-04-2016 IPR011840 Pullulanase, type I HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 426 498 2.9E-8 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SUPERFAMILY SSF51445 53 416 6.67E-67 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00590 2797d07de1769fb1c42967e175c641fb 1696 SUPERFAMILY SSF49452 630 727 4.58E-16 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 HMPREF9228_RS05000 5e3bde0483c3c8bf5a30fe2a737059e1 824 PANTHER PTHR24421 188 456 1.7E-52 T 22-04-2016 HMPREF9228_RS05000 5e3bde0483c3c8bf5a30fe2a737059e1 824 PANTHER PTHR24421:SF26 188 456 1.7E-52 T 22-04-2016 HMPREF9228_RS05000 5e3bde0483c3c8bf5a30fe2a737059e1 824 Gene3D G3DSA:3.30.565.10 344 441 2.0E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05000 5e3bde0483c3c8bf5a30fe2a737059e1 824 Gene3D G3DSA:3.30.565.10 290 300 2.0E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05000 5e3bde0483c3c8bf5a30fe2a737059e1 824 SUPERFAMILY SSF55874 350 443 1.81E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05000 5e3bde0483c3c8bf5a30fe2a737059e1 824 Pfam PF07730 Histidine kinase 247 309 1.6E-13 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 370 391 6.7E-16 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 930 954 6.7E-16 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 513 531 6.7E-16 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 126 146 6.7E-16 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 SMART SM00831 35 109 7.6E-27 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Gene3D G3DSA:3.40.1110.10 367 612 1.2E-60 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 SUPERFAMILY SSF81653 164 272 4.97E-28 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Gene3D G3DSA:2.70.150.10 158 272 1.4E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Gene3D G3DSA:2.70.150.10 46 88 1.4E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Pfam PF00690 Cation transporter/ATPase, N-terminus 40 104 5.5E-22 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Gene3D G3DSA:1.20.1110.10 89 157 5.9E-116 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Gene3D G3DSA:1.20.1110.10 677 990 5.9E-116 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 131 246 1.6E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 678 791 9.0E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 257 397 1.7E-25 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Pfam PF00122 E1-E2 ATPase 130 368 2.9E-65 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PANTHER PTHR24093 40 856 0.0 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PANTHER PTHR24093 880 995 0.0 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Pfam PF00689 Cation transporting ATPase, C-terminus 805 987 2.1E-50 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 SUPERFAMILY SSF81665 35 163 1.83E-129 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 SUPERFAMILY SSF81665 758 993 1.83E-129 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 SUPERFAMILY SSF81665 273 371 1.83E-129 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 SUPERFAMILY SSF56784 375 395 7.03E-57 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 SUPERFAMILY SSF56784 543 825 7.03E-57 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 616 1.7E-37 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 727 1.7E-37 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 210 224 1.7E-37 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 637 1.7E-37 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 744 1.7E-37 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 377 391 1.7E-37 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 379 385 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 Pfam PF00702 haloacid dehalogenase-like hydrolase 375 722 4.5E-21 T 22-04-2016 HMPREF9228_RS09495 41a5df6dd8bf9217d6748ba7e76b47d8 996 SUPERFAMILY SSF81660 384 609 4.91E-51 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 200 5.6E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 184 5.6E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 212 5.6E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 ProSitePatterns PS00622 LuxR-type HTH domain signature. 184 211 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 Gene3D G3DSA:1.10.10.10 170 227 9.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 PANTHER PTHR26402 9 230 1.2E-25 T 22-04-2016 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 SUPERFAMILY SSF52172 8 129 6.26E-16 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 SMART SM00448 9 124 0.006 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 Gene3D G3DSA:3.40.50.2300 7 133 3.5E-16 T 22-04-2016 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 PANTHER PTHR26402:SF458 9 230 1.2E-25 T 22-04-2016 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 Pfam PF00072 Response regulator receiver domain 12 115 6.2E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 169 222 1.0E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 SUPERFAMILY SSF46894 159 227 7.14E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS02665 d0a549de2a8c411915ac20906d580b97 230 SMART SM00421 167 224 6.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 PANTHER PTHR30146 5 338 2.1E-99 T 22-04-2016 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 Gene3D G3DSA:3.40.50.2300 58 182 2.5E-19 T 22-04-2016 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 Gene3D G3DSA:3.40.50.2300 183 317 1.1E-31 T 22-04-2016 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 SMART SM00354 5 75 5.6E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 6.2E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 PANTHER PTHR30146:SF45 5 338 2.1E-99 T 22-04-2016 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 SUPERFAMILY SSF53822 80 338 8.78E-48 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 SUPERFAMILY SSF47413 5 63 5.25E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 Pfam PF13377 Periplasmic binding protein-like domain 179 335 1.6E-27 T 22-04-2016 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06080 2077d41ccd15a4b057b25633fba05e7c 338 Gene3D G3DSA:1.10.260.40 6 57 2.8E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS07925 e5b81a819cd26e9289cd7eff94b69b89 750 SUPERFAMILY SSF52317 622 688 3.36E-24 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS07925 e5b81a819cd26e9289cd7eff94b69b89 750 SUPERFAMILY SSF52317 443 590 3.36E-24 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS07925 e5b81a819cd26e9289cd7eff94b69b89 750 TIGRFAM TIGR02336 TIGR02336: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase 2 749 0.0 T 22-04-2016 IPR012711 Lacto-N-biose phosphorylase GO:0016758 HMPREF9228_RS07925 e5b81a819cd26e9289cd7eff94b69b89 750 Pfam PF09508 Lacto-N-biose phosphorylase 4 748 0.0 T 22-04-2016 IPR012711 Lacto-N-biose phosphorylase GO:0016758 HMPREF9228_RS06460 93fd199923c0d4438203f1baee56bd76 539 PANTHER PTHR30290 1 539 1.7E-92 T 22-04-2016 HMPREF9228_RS06460 93fd199923c0d4438203f1baee56bd76 539 PIRSF PIRSF002741 1 535 2.4E-65 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 HMPREF9228_RS06460 93fd199923c0d4438203f1baee56bd76 539 Gene3D G3DSA:3.10.105.10 323 511 2.5E-40 T 22-04-2016 HMPREF9228_RS06460 93fd199923c0d4438203f1baee56bd76 539 SUPERFAMILY SSF53850 39 537 1.09E-94 T 22-04-2016 HMPREF9228_RS06460 93fd199923c0d4438203f1baee56bd76 539 Gene3D G3DSA:3.90.76.10 50 209 1.5E-36 T 22-04-2016 HMPREF9228_RS06460 93fd199923c0d4438203f1baee56bd76 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 461 1.7E-59 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain HMPREF9228_RS06460 93fd199923c0d4438203f1baee56bd76 539 PANTHER PTHR30290:SF10 1 539 1.7E-92 T 22-04-2016 HMPREF9228_RS06460 93fd199923c0d4438203f1baee56bd76 539 Gene3D G3DSA:3.40.190.10 210 322 2.7E-24 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 Gene3D G3DSA:1.20.1250.20 303 505 1.1E-25 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 Gene3D G3DSA:1.20.1250.20 37 210 9.6E-27 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 PANTHER PTHR23501 37 278 6.1E-108 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 PANTHER PTHR23501 298 503 6.1E-108 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 SUPERFAMILY SSF103473 291 506 3.27E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 SUPERFAMILY SSF103473 28 219 3.27E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 Pfam PF07690 Major Facilitator Superfamily 38 454 3.4E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 39 63 6.3E-5 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 99 121 6.3E-5 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 160 184 6.3E-5 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 PANTHER PTHR23501:SF82 37 278 6.1E-108 T 22-04-2016 HMPREF9228_RS02135 2a9d83b41a1ccef68a5dc18290e8d2bf 532 PANTHER PTHR23501:SF82 298 503 6.1E-108 T 22-04-2016 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 PIRSF PIRSF002158 10 272 2.0E-91 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 Gene3D G3DSA:2.30.30.30 120 196 7.6E-30 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 Gene3D G3DSA:2.40.50.140 1 115 6.7E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 PANTHER PTHR13691:SF5 1 276 1.9E-131 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 PANTHER PTHR13691 1 276 1.9E-131 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 SMART SM01383 42 119 1.3E-46 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 SMART SM01382 125 250 3.5E-76 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 270 45.005 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 248 2.6E-48 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 Gene3D G3DSA:4.10.950.10 197 269 3.2E-25 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.9E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 SUPERFAMILY SSF50104 127 268 7.82E-50 T 22-04-2016 IPR008991 Translation protein SH3-like domain HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 SUPERFAMILY SSF50249 2 126 4.46E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08180 d49ad9382c84d593b7e495387bcc1b04 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 269 2.6E-121 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 6.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 6.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 Gene3D G3DSA:1.10.10.10 12 84 5.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 SUPERFAMILY SSF53383 117 491 1.0E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 PANTHER PTHR11751 104 492 3.2E-137 T 22-04-2016 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 2.4E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 SMART SM00345 25 84 1.8E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 PANTHER PTHR11751:SF392 104 492 3.2E-137 T 22-04-2016 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 Gene3D G3DSA:3.40.640.10 146 356 6.0E-51 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 Gene3D G3DSA:3.90.1150.10 357 491 1.0E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 SUPERFAMILY SSF46785 14 92 1.72E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02560 5da4c988bf0062e7f5a37c96ec1b43b1 493 Pfam PF00155 Aminotransferase class I and II 145 483 1.2E-38 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS08780 b055bcad7c871a048275eaf04469cfbb 255 PANTHER PTHR21240 96 255 3.2E-13 T 22-04-2016 HMPREF9228_RS08780 b055bcad7c871a048275eaf04469cfbb 255 Pfam PF04909 Amidohydrolase 109 254 9.6E-16 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 HMPREF9228_RS08780 b055bcad7c871a048275eaf04469cfbb 255 SUPERFAMILY SSF51556 4 254 7.26E-31 T 22-04-2016 IPR032466 Metal-dependent hydrolase HMPREF9228_RS08780 b055bcad7c871a048275eaf04469cfbb 255 Gene3D G3DSA:3.20.20.140 2 255 4.4E-34 T 22-04-2016 HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 18 364 5.8E-45 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 PANTHER PTHR10629 11 181 1.3E-26 T 22-04-2016 HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 Gene3D G3DSA:3.40.50.150 11 189 1.8E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 124 138 1.8E-10 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 16 32 1.8E-10 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 169 182 1.8E-10 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 Pfam PF00145 C-5 cytosine-specific DNA methylase 18 366 1.8E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 SUPERFAMILY SSF53335 17 366 4.62E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS01090 a4634398ea4b19721cbacee4ce9a042d 392 Gene3D G3DSA:3.90.120.10 266 333 3.3E-6 T 22-04-2016 HMPREF9228_RS09380 ea01ecbcb47c8f1f2e46eb18146dca03 779 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 12 172 1.3E-37 T 22-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal HMPREF9228_RS09380 ea01ecbcb47c8f1f2e46eb18146dca03 779 PANTHER PTHR30294 595 774 9.3E-67 T 22-04-2016 HMPREF9228_RS09380 ea01ecbcb47c8f1f2e46eb18146dca03 779 PANTHER PTHR30294 523 562 9.3E-67 T 22-04-2016 HMPREF9228_RS09380 ea01ecbcb47c8f1f2e46eb18146dca03 779 PANTHER PTHR30294 1 217 9.3E-67 T 22-04-2016 HMPREF9228_RS09380 ea01ecbcb47c8f1f2e46eb18146dca03 779 PANTHER PTHR30294:SF4 595 774 9.3E-67 T 22-04-2016 HMPREF9228_RS09380 ea01ecbcb47c8f1f2e46eb18146dca03 779 PANTHER PTHR30294:SF4 523 562 9.3E-67 T 22-04-2016 HMPREF9228_RS09380 ea01ecbcb47c8f1f2e46eb18146dca03 779 PANTHER PTHR30294:SF4 1 217 9.3E-67 T 22-04-2016 HMPREF9228_RS02260 da8b543202b903d7cb23b8ff01dfc2dd 253 Pfam PF01695 IstB-like ATP binding protein 59 230 1.8E-50 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 HMPREF9228_RS02260 da8b543202b903d7cb23b8ff01dfc2dd 253 PANTHER PTHR30050 40 240 6.5E-39 T 22-04-2016 HMPREF9228_RS02260 da8b543202b903d7cb23b8ff01dfc2dd 253 Gene3D G3DSA:3.40.50.300 62 232 2.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02260 da8b543202b903d7cb23b8ff01dfc2dd 253 PANTHER PTHR30050:SF6 40 240 6.5E-39 T 22-04-2016 HMPREF9228_RS02260 da8b543202b903d7cb23b8ff01dfc2dd 253 PIRSF PIRSF003073 13 249 6.4E-56 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein HMPREF9228_RS02260 da8b543202b903d7cb23b8ff01dfc2dd 253 SMART SM00382 100 233 7.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02260 da8b543202b903d7cb23b8ff01dfc2dd 253 SUPERFAMILY SSF52540 77 229 2.89E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06930 da8b543202b903d7cb23b8ff01dfc2dd 253 Pfam PF01695 IstB-like ATP binding protein 59 230 1.8E-50 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 HMPREF9228_RS06930 da8b543202b903d7cb23b8ff01dfc2dd 253 PANTHER PTHR30050 40 240 6.5E-39 T 22-04-2016 HMPREF9228_RS06930 da8b543202b903d7cb23b8ff01dfc2dd 253 Gene3D G3DSA:3.40.50.300 62 232 2.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06930 da8b543202b903d7cb23b8ff01dfc2dd 253 PANTHER PTHR30050:SF6 40 240 6.5E-39 T 22-04-2016 HMPREF9228_RS06930 da8b543202b903d7cb23b8ff01dfc2dd 253 PIRSF PIRSF003073 13 249 6.4E-56 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein HMPREF9228_RS06930 da8b543202b903d7cb23b8ff01dfc2dd 253 SMART SM00382 100 233 7.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06930 da8b543202b903d7cb23b8ff01dfc2dd 253 SUPERFAMILY SSF52540 77 229 2.89E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02895 fd0a523142edcb866939b2b98e8f7e1a 127 Pfam PF01476 LysM domain 76 125 1.9E-9 T 22-04-2016 IPR018392 LysM domain HMPREF9228_RS02895 fd0a523142edcb866939b2b98e8f7e1a 127 SUPERFAMILY SSF54106 74 125 1.44E-7 T 22-04-2016 IPR018392 LysM domain HMPREF9228_RS02895 fd0a523142edcb866939b2b98e8f7e1a 127 Gene3D G3DSA:3.10.350.10 74 125 1.0E-12 T 22-04-2016 IPR018392 LysM domain HMPREF9228_RS02895 fd0a523142edcb866939b2b98e8f7e1a 127 SMART SM00257 75 125 3.1E-5 T 22-04-2016 IPR018392 LysM domain HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 Gene3D G3DSA:1.20.1560.10 23 354 7.5E-75 T 22-04-2016 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 Pfam PF00664 ABC transporter transmembrane region 37 298 1.1E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 PANTHER PTHR24221 420 665 4.0E-204 T 22-04-2016 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 PANTHER PTHR24221 20 360 4.0E-204 T 22-04-2016 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 Gene3D G3DSA:3.40.50.300 432 662 2.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 ProSitePatterns PS00211 ABC transporters family signature. 569 583 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 SUPERFAMILY SSF90123 18 352 5.1E-74 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 PANTHER PTHR24221:SF271 420 665 4.0E-204 T 22-04-2016 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 PANTHER PTHR24221:SF271 20 360 4.0E-204 T 22-04-2016 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 SMART SM00382 457 643 7.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 Pfam PF00005 ABC transporter 448 597 4.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07120 ec1ca9097e7c49a1432e06de7f393b71 671 SUPERFAMILY SSF52540 425 665 2.97E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00640 67a524c49f23f6653a0a8fff16b168ce 268 PANTHER PTHR13696 26 143 6.8E-14 T 22-04-2016 HMPREF9228_RS00640 67a524c49f23f6653a0a8fff16b168ce 268 Gene3D G3DSA:3.40.50.300 25 146 3.7E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00640 67a524c49f23f6653a0a8fff16b168ce 268 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 24 77 1.1E-8 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein HMPREF9228_RS00640 67a524c49f23f6653a0a8fff16b168ce 268 SUPERFAMILY SSF52540 25 253 2.34E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00640 67a524c49f23f6653a0a8fff16b168ce 268 PANTHER PTHR13696:SF64 26 143 6.8E-14 T 22-04-2016 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 PANTHER PTHR20857:SF19 28 312 4.5E-51 T 22-04-2016 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 PIRSF PIRSF000513 29 313 2.5E-58 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 SUPERFAMILY SSF53613 31 307 3.45E-47 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 37 307 26.869 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 143 157 5.7E-17 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 43 50 5.7E-17 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 56 77 5.7E-17 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 113 130 5.7E-17 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 87 95 5.7E-17 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 Pfam PF02110 Hydroxyethylthiazole kinase family 36 304 5.1E-51 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 Gene3D G3DSA:3.40.1190.20 25 308 1.2E-70 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS02700 7fbf8685b153c5d8e32eea7437b7364a 314 PANTHER PTHR20857 28 312 4.5E-51 T 22-04-2016 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 SUPERFAMILY SSF52374 23 172 1.35E-20 T 22-04-2016 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 SUPERFAMILY SSF52374 208 238 1.35E-20 T 22-04-2016 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 PANTHER PTHR22749 204 372 1.1E-71 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 PANTHER PTHR22749 26 167 1.1E-71 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 Pfam PF01687 Riboflavin kinase 246 371 8.0E-31 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 Gene3D G3DSA:3.40.50.620 226 241 4.5E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 Gene3D G3DSA:3.40.50.620 15 183 4.5E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 SUPERFAMILY SSF82114 236 372 7.41E-38 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 Pfam PF06574 FAD synthetase 20 185 3.3E-44 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 SMART SM00904 245 374 7.8E-47 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 Gene3D G3DSA:2.40.30.30 242 373 8.2E-43 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 PANTHER PTHR22749:SF0 204 372 1.1E-71 T 22-04-2016 HMPREF9228_RS08010 045a56dbcdf9d5be02ca82a4b80f897b 374 PANTHER PTHR22749:SF0 26 167 1.1E-71 T 22-04-2016 HMPREF9228_RS07510 201c0f6a2c0ba2d11042e7e712983cf8 360 SMART SM00382 69 251 3.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07510 201c0f6a2c0ba2d11042e7e712983cf8 360 Pfam PF00005 ABC transporter 61 203 1.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07510 201c0f6a2c0ba2d11042e7e712983cf8 360 Gene3D G3DSA:3.40.50.300 38 266 3.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07510 201c0f6a2c0ba2d11042e7e712983cf8 360 SUPERFAMILY SSF52540 35 267 1.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07510 201c0f6a2c0ba2d11042e7e712983cf8 360 PANTHER PTHR24220 46 262 1.0E-87 T 22-04-2016 HMPREF9228_RS07510 201c0f6a2c0ba2d11042e7e712983cf8 360 PANTHER PTHR24220:SF593 46 262 1.0E-87 T 22-04-2016 HMPREF9228_RS06370 d6f9395816033d5a9fafa620f686ad58 119 SUPERFAMILY SSF53807 1 85 1.96E-14 T 22-04-2016 HMPREF9228_RS06370 d6f9395816033d5a9fafa620f686ad58 119 Pfam PF01297 Zinc-uptake complex component A periplasmic 2 84 3.3E-7 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 HMPREF9228_RS06370 d6f9395816033d5a9fafa620f686ad58 119 Gene3D G3DSA:3.40.50.1980 1 84 1.6E-14 T 22-04-2016 HMPREF9228_RS05645 979b5de29cf03497592dc144015583a3 254 Hamap MF_00443 Thiazole synthase [thiG]. 5 254 38.791 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 HMPREF9228_RS05645 979b5de29cf03497592dc144015583a3 254 PANTHER PTHR34266 1 254 1.8E-125 T 22-04-2016 HMPREF9228_RS05645 979b5de29cf03497592dc144015583a3 254 SUPERFAMILY SSF110399 5 235 1.06E-71 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 HMPREF9228_RS05645 979b5de29cf03497592dc144015583a3 254 Gene3D G3DSA:3.20.20.70 5 249 2.5E-46 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS05645 979b5de29cf03497592dc144015583a3 254 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 248 9.4E-97 T 22-04-2016 HMPREF9228_RS05075 554c827d5ae2fd93f8c9b99ac5acc136 462 Pfam PF06965 Na+/H+ antiporter 1 17 410 9.6E-112 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 HMPREF9228_RS05075 554c827d5ae2fd93f8c9b99ac5acc136 462 PANTHER PTHR30341:SF0 14 125 3.4E-99 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 HMPREF9228_RS05075 554c827d5ae2fd93f8c9b99ac5acc136 462 PANTHER PTHR30341:SF0 152 425 3.4E-99 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 HMPREF9228_RS05075 554c827d5ae2fd93f8c9b99ac5acc136 462 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 15 417 18.392 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 HMPREF9228_RS05075 554c827d5ae2fd93f8c9b99ac5acc136 462 Gene3D G3DSA:1.20.1530.10 15 417 8.7E-124 T 22-04-2016 IPR023171 Na/H antiporter domain HMPREF9228_RS05075 554c827d5ae2fd93f8c9b99ac5acc136 462 PANTHER PTHR30341 14 125 3.4E-99 T 22-04-2016 HMPREF9228_RS05075 554c827d5ae2fd93f8c9b99ac5acc136 462 PANTHER PTHR30341 152 425 3.4E-99 T 22-04-2016 HMPREF9228_RS07315 1c425cdbee4cb69cf734fb1357508b5c 224 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 8 144 1.4E-16 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 HMPREF9228_RS07315 1c425cdbee4cb69cf734fb1357508b5c 224 Pfam PF00436 Single-strand binding protein family 8 107 1.8E-16 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 HMPREF9228_RS07315 1c425cdbee4cb69cf734fb1357508b5c 224 SUPERFAMILY SSF50249 8 156 2.91E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS07315 1c425cdbee4cb69cf734fb1357508b5c 224 Gene3D G3DSA:2.40.50.140 6 113 8.5E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS03575 1455526d17d5aa7eeee9f0f90c7677ac 316 SUPERFAMILY SSF144083 246 311 1.7E-13 T 22-04-2016 HMPREF9228_RS03575 1455526d17d5aa7eeee9f0f90c7677ac 316 SUPERFAMILY SSF143865 11 245 4.97E-50 T 22-04-2016 HMPREF9228_RS03575 1455526d17d5aa7eeee9f0f90c7677ac 316 PANTHER PTHR21535 2 316 1.6E-87 T 22-04-2016 HMPREF9228_RS03575 1455526d17d5aa7eeee9f0f90c7677ac 316 Gene3D G3DSA:3.30.460.20 14 112 1.3E-7 T 22-04-2016 HMPREF9228_RS03575 1455526d17d5aa7eeee9f0f90c7677ac 316 Pfam PF01544 CorA-like Mg2+ transporter protein 22 311 2.4E-60 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 HMPREF9228_RS03575 1455526d17d5aa7eeee9f0f90c7677ac 316 Gene3D G3DSA:1.20.58.340 234 315 6.6E-21 T 22-04-2016 HMPREF9228_RS03575 1455526d17d5aa7eeee9f0f90c7677ac 316 PANTHER PTHR21535:SF40 2 316 1.6E-87 T 22-04-2016 HMPREF9228_RS02595 2c9fdb06fa75ed91feb70de7dc787c71 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 293 4.0E-48 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 HMPREF9228_RS02595 2c9fdb06fa75ed91feb70de7dc787c71 328 SUPERFAMILY SSF52283 57 140 6.38E-14 T 22-04-2016 HMPREF9228_RS02595 2c9fdb06fa75ed91feb70de7dc787c71 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 74 326 6.1E-7 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 HMPREF9228_RS02595 2c9fdb06fa75ed91feb70de7dc787c71 328 PANTHER PTHR10996 75 328 1.2E-66 T 22-04-2016 HMPREF9228_RS02595 2c9fdb06fa75ed91feb70de7dc787c71 328 SUPERFAMILY SSF51735 112 293 2.76E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02595 2c9fdb06fa75ed91feb70de7dc787c71 328 Gene3D G3DSA:3.40.50.720 72 120 1.8E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02595 2c9fdb06fa75ed91feb70de7dc787c71 328 Gene3D G3DSA:3.40.50.720 121 294 4.0E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 PANTHER PTHR24029 6 609 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 PANTHER PTHR24029 625 698 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Pfam PF12344 Ultra-violet resistance protein B 557 598 2.8E-21 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 SUPERFAMILY SSF52540 10 420 4.74E-136 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Pfam PF04851 Type III restriction enzyme, res subunit 23 126 5.4E-10 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Gene3D G3DSA:3.40.50.300 394 415 3.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Gene3D G3DSA:3.40.50.300 284 344 3.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Gene3D G3DSA:3.40.50.300 15 96 3.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Pfam PF02151 UvrB/uvrC motif 661 694 6.7E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 SMART SM00490 465 551 4.6E-20 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 12 692 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 SUPERFAMILY SSF52540 475 598 2.22E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 SUPERFAMILY SSF52540 39 87 2.22E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Hamap MF_00204 UvrABC system protein B [uvrB]. 10 694 42.434 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 SMART SM00487 16 431 5.6E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Gene3D G3DSA:3.30.2060.10 168 237 3.7E-13 T 22-04-2016 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 SUPERFAMILY SSF46600 655 697 4.58E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Pfam PF00271 Helicase conserved C-terminal domain 440 550 1.8E-18 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Gene3D G3DSA:4.10.860.10 653 698 3.3E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 HMPREF9228_RS05330 c20142397e12ae0bd470dfb780e2499c 703 Gene3D G3DSA:3.40.50.300 424 587 4.9E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 Gene3D G3DSA:2.40.50.100 241 284 1.1E-6 T 22-04-2016 HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 Gene3D G3DSA:2.40.50.100 360 374 1.1E-6 T 22-04-2016 HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 Gene3D G3DSA:2.40.50.140 285 359 9.5E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 Pfam PF00005 ABC transporter 22 163 2.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 PANTHER PTHR24220 5 243 8.8E-162 T 22-04-2016 HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 SMART SM00382 30 214 4.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 PANTHER PTHR24220:SF151 5 243 8.8E-162 T 22-04-2016 HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 SUPERFAMILY SSF50331 238 374 2.58E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 Gene3D G3DSA:3.40.50.300 4 236 1.7E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09590 bd76da6642a1f8b4e9d3eeb6e5036990 375 SUPERFAMILY SSF52540 5 243 1.01E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 187 1.8E-24 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 184 6.0E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 PANTHER PTHR18901 1 185 2.8E-56 T 22-04-2016 HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 PANTHER PTHR18901:SF19 1 185 2.8E-56 T 22-04-2016 HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 Gene3D G3DSA:3.40.50.1000 1 17 1.1E-29 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 Gene3D G3DSA:3.40.50.1000 94 188 1.1E-29 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 SUPERFAMILY SSF56784 3 212 1.54E-44 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 4 187 5.5E-68 T 22-04-2016 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-6317|MetaCyc: PWY-7459 HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 3 185 1.5E-56 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase HMPREF9228_RS08505 2e73e9822a02d1508a1d12e9d7eb9cb6 213 Gene3D G3DSA:1.10.150.240 18 92 3.2E-30 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PANTHER PTHR11811:SF25 6 479 1.4E-266 T 22-04-2016 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 Gene3D G3DSA:1.10.1040.10 183 441 8.0E-105 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 SUPERFAMILY SSF48179 179 478 1.29E-115 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 SMART SM01350 181 475 8.0E-202 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 Gene3D G3DSA:3.40.50.720 4 182 7.8E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 Gene3D G3DSA:1.20.5.320 443 479 6.3E-17 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 173 3.4E-50 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 69 98 9.4E-71 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 122 147 9.4E-71 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 252 279 9.4E-71 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 6 29 9.4E-71 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 170 198 9.4E-71 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 363 385 9.4E-71 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 SUPERFAMILY SSF51735 6 179 1.08E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 181 474 2.7E-121 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 7 475 1.5E-201 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PIRSF PIRSF000109 1 482 3.6E-200 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 HMPREF9228_RS01170 00e6fc65f3e81bbc6e8764340f801251 484 PANTHER PTHR11811 6 479 1.4E-266 T 22-04-2016 HMPREF9228_RS03205 1dec2f84c765366c46dca0070804de94 338 Gene3D G3DSA:3.40.50.720 4 179 3.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS03205 1dec2f84c765366c46dca0070804de94 338 SUPERFAMILY SSF51735 5 160 1.25E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS03205 1dec2f84c765366c46dca0070804de94 338 PANTHER PTHR21363:SF0 4 273 1.5E-50 T 22-04-2016 HMPREF9228_RS03205 1dec2f84c765366c46dca0070804de94 338 PANTHER PTHR21363 4 273 1.5E-50 T 22-04-2016 HMPREF9228_RS03205 1dec2f84c765366c46dca0070804de94 338 SUPERFAMILY SSF48179 173 280 1.47E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 HMPREF9228_RS03205 1dec2f84c765366c46dca0070804de94 338 Pfam PF02153 Prephenate dehydrogenase 18 272 1.5E-45 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 HMPREF9228_RS01495 ee57393bdcf7cedfe5e480d16521e517 129 SUPERFAMILY SSF48600 31 115 7.02E-17 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 HMPREF9228_RS01495 ee57393bdcf7cedfe5e480d16521e517 129 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 28 120 4.0E-49 T 22-04-2016 IPR010951 Chorismate mutase, bacteria HMPREF9228_RS01495 ee57393bdcf7cedfe5e480d16521e517 129 SMART SM00830 35 115 8.7E-13 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 HMPREF9228_RS01495 ee57393bdcf7cedfe5e480d16521e517 129 Pfam PF01817 Chorismate mutase type II 35 107 8.4E-12 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 HMPREF9228_RS01495 ee57393bdcf7cedfe5e480d16521e517 129 Gene3D G3DSA:1.20.59.10 20 103 2.3E-15 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 Gene3D G3DSA:3.90.1170.20 2 146 3.2E-50 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 137 295 5.0E-54 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 SUPERFAMILY SSF54675 4 109 8.48E-33 T 22-04-2016 HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 PANTHER PTHR32179 1 297 7.9E-106 T 22-04-2016 HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 11 295 4.1E-92 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 Gene3D G3DSA:3.20.20.70 147 286 6.6E-57 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 SUPERFAMILY SSF51690 110 296 8.63E-53 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 PIRSF PIRSF006250 1 297 4.6E-85 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD HMPREF9228_RS03160 7f2aedf97b35ce2249c46b3f922e685b 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 20 108 1.0E-27 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 HMPREF9228_RS09340 8c96c5158c90de073424b32590ef9f5a 280 PANTHER PTHR32243 12 280 6.1E-69 T 22-04-2016 HMPREF9228_RS09340 8c96c5158c90de073424b32590ef9f5a 280 PANTHER PTHR32243:SF10 12 280 6.1E-69 T 22-04-2016 HMPREF9228_RS09340 8c96c5158c90de073424b32590ef9f5a 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 273 9.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09340 8c96c5158c90de073424b32590ef9f5a 280 SUPERFAMILY SSF161098 9 280 1.4E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09340 8c96c5158c90de073424b32590ef9f5a 280 Gene3D G3DSA:1.10.3720.10 10 267 2.7E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 PANTHER PTHR15184 14 489 8.7E-292 T 22-04-2016 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 153 366 2.8E-65 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 SUPERFAMILY SSF47917 369 485 8.11E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 Gene3D G3DSA:1.10.1140.10 369 487 4.1E-46 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 Gene3D G3DSA:3.40.50.300 97 368 3.2E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 PANTHER PTHR15184:SF8 14 489 8.7E-292 T 22-04-2016 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 SUPERFAMILY SSF52540 98 371 2.3E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 SMART SM00382 165 369 2.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 Gene3D G3DSA:2.40.10.170 7 96 1.6E-29 T 22-04-2016 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 16 94 1.7E-19 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 13 484 2.1E-230 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 Hamap MF_01347 ATP synthase subunit beta [atpB]. 11 484 53.897 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01590 888e6a40d28c9b7d5d5b884e9a4f752c 490 SUPERFAMILY SSF50615 13 96 2.88E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 185 2.3E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Gene3D G3DSA:3.30.70.240 411 500 1.3E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 TIGRFAM TIGR01393 lepA: elongation factor 4 15 605 1.2E-285 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Gene3D G3DSA:2.40.30.10 204 300 3.1E-20 T 22-04-2016 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 PANTHER PTHR23115:SF97 1 606 6.7E-254 T 22-04-2016 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 PANTHER PTHR23115 1 606 6.7E-254 T 22-04-2016 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 SMART SM00838 408 496 4.8E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Pfam PF06421 GTP-binding protein LepA C-terminus 498 603 1.0E-47 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Pfam PF03144 Elongation factor Tu domain 2 216 286 3.4E-7 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 SUPERFAMILY SSF54980 409 504 2.06E-23 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Gene3D G3DSA:3.30.70.870 302 379 1.1E-23 T 22-04-2016 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 SUPERFAMILY SSF50447 176 299 2.01E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Pfam PF00009 Elongation factor Tu GTP binding domain 16 192 4.5E-50 T 22-04-2016 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Pfam PF00679 Elongation factor G C-terminus 409 495 3.2E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 SUPERFAMILY SSF54980 302 381 1.08E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 PRINTS PR00315 GTP-binding elongation factor signature 18 31 1.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 PRINTS PR00315 GTP-binding elongation factor signature 61 69 1.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 SUPERFAMILY SSF52540 12 217 9.77E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Hamap MF_00071 Elongation factor 4 [lepA]. 1 608 275.194 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 HMPREF9228_RS04480 462d3f80bf88b286ab5fa686d6386019 626 Gene3D G3DSA:3.40.50.300 12 203 4.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01535 10ff61f760567370c1c71e69d20e3349 164 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 54 60 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 HMPREF9228_RS01535 10ff61f760567370c1c71e69d20e3349 164 PANTHER PTHR10286 5 152 1.3E-55 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 HMPREF9228_RS01535 10ff61f760567370c1c71e69d20e3349 164 Pfam PF00719 Inorganic pyrophosphatase 7 158 5.4E-50 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 HMPREF9228_RS01535 10ff61f760567370c1c71e69d20e3349 164 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 3 160 31.175 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 HMPREF9228_RS01535 10ff61f760567370c1c71e69d20e3349 164 Gene3D G3DSA:3.90.80.10 3 159 1.7E-52 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 HMPREF9228_RS01535 10ff61f760567370c1c71e69d20e3349 164 SUPERFAMILY SSF50324 3 160 8.24E-55 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 38 361 1.4E-74 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 SUPERFAMILY SSF52374 40 361 7.38E-72 T 22-04-2016 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 Gene3D G3DSA:1.10.240.10 238 329 1.2E-26 T 22-04-2016 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 Pfam PF00579 tRNA synthetases class I (W and Y) 38 316 1.3E-50 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 PANTHER PTHR10055 41 363 2.6E-108 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 Gene3D G3DSA:3.40.50.620 39 237 7.1E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 PANTHER PTHR10055:SF6 41 363 2.6E-108 T 22-04-2016 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 51 67 3.9E-24 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 178 199 3.9E-24 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 102 121 3.9E-24 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 231 241 3.9E-24 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 HMPREF9228_RS00245 ad7e93189c4473327fbb73be0ecc1610 363 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 56 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01865 e7f9fff0d94cd22e71167abae8411e3b 310 SUPERFAMILY SSF161098 69 295 1.7E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01865 e7f9fff0d94cd22e71167abae8411e3b 310 Gene3D G3DSA:1.10.3720.10 25 296 7.1E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01865 e7f9fff0d94cd22e71167abae8411e3b 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 304 2.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01865 e7f9fff0d94cd22e71167abae8411e3b 310 PANTHER PTHR30193 3 298 8.5E-75 T 22-04-2016 HMPREF9228_RS01865 e7f9fff0d94cd22e71167abae8411e3b 310 PANTHER PTHR30193:SF6 3 298 8.5E-75 T 22-04-2016 HMPREF9228_RS03700 d78e004e3bd9bc36a1d240c8d654db92 406 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 271 290 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 HMPREF9228_RS03700 d78e004e3bd9bc36a1d240c8d654db92 406 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 380 2.7E-67 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 HMPREF9228_RS03700 d78e004e3bd9bc36a1d240c8d654db92 406 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 405 5.1E-203 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 HMPREF9228_RS03700 d78e004e3bd9bc36a1d240c8d654db92 406 SMART SM01329 9 396 3.0E-123 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 HMPREF9228_RS03700 d78e004e3bd9bc36a1d240c8d654db92 406 PANTHER PTHR11822 1 406 0.0 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 HMPREF9228_RS03700 d78e004e3bd9bc36a1d240c8d654db92 406 SUPERFAMILY SSF53659 1 405 2.5E-147 T 22-04-2016 HMPREF9228_RS03700 d78e004e3bd9bc36a1d240c8d654db92 406 Gene3D G3DSA:3.40.718.10 3 404 1.0E-166 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 HMPREF9228_RS03700 d78e004e3bd9bc36a1d240c8d654db92 406 PIRSF PIRSF000108 1 406 1.3E-217 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 HMPREF9228_RS02675 b2d502793078f36a85ecae69c76478fc 445 Gene3D G3DSA:1.20.1250.20 262 441 2.7E-20 T 22-04-2016 HMPREF9228_RS02675 b2d502793078f36a85ecae69c76478fc 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 331 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 HMPREF9228_RS02675 b2d502793078f36a85ecae69c76478fc 445 SUPERFAMILY SSF103473 22 443 8.5E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02675 b2d502793078f36a85ecae69c76478fc 445 Gene3D G3DSA:1.20.1250.20 31 216 9.0E-23 T 22-04-2016 HMPREF9228_RS02675 b2d502793078f36a85ecae69c76478fc 445 PANTHER PTHR24064 22 444 2.4E-86 T 22-04-2016 HMPREF9228_RS02675 b2d502793078f36a85ecae69c76478fc 445 Pfam PF00083 Sugar (and other) transporter 63 443 3.2E-35 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 HMPREF9228_RS02675 b2d502793078f36a85ecae69c76478fc 445 PANTHER PTHR24064:SF293 22 444 2.4E-86 T 22-04-2016 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 SUPERFAMILY SSF55174 14 112 1.1E-18 T 22-04-2016 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 Gene3D G3DSA:3.10.290.10 14 104 7.5E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 SUPERFAMILY SSF53335 68 254 4.95E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 14 249 3.1E-56 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 Pfam PF01479 S4 domain 14 57 4.0E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 SMART SM00363 13 78 1.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 PANTHER PTHR32319 7 254 4.3E-91 T 22-04-2016 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 PIRSF PIRSF005578 9 257 1.3E-85 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 Pfam PF01728 FtsJ-like methyltransferase 69 253 4.5E-19 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 PANTHER PTHR32319:SF0 7 254 4.3E-91 T 22-04-2016 HMPREF9228_RS05600 36df70f518eb20ca58ccdeb676d47702 257 Gene3D G3DSA:3.40.50.150 105 242 3.8E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS00185 db81ce00cb16765f8159804bf64adca4 260 PANTHER PTHR32243 10 260 1.8E-89 T 22-04-2016 HMPREF9228_RS00185 db81ce00cb16765f8159804bf64adca4 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 250 4.2E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00185 db81ce00cb16765f8159804bf64adca4 260 PANTHER PTHR32243:SF7 10 260 1.8E-89 T 22-04-2016 HMPREF9228_RS00185 db81ce00cb16765f8159804bf64adca4 260 Gene3D G3DSA:1.10.3720.10 7 248 1.9E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00185 db81ce00cb16765f8159804bf64adca4 260 SUPERFAMILY SSF161098 5 260 1.11E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04545 25f058909d863f6ac9abeaeee5c76022 394 PANTHER PTHR30473:SF1 100 374 1.2E-138 T 22-04-2016 HMPREF9228_RS04545 25f058909d863f6ac9abeaeee5c76022 394 PANTHER PTHR30473 1 70 1.2E-138 T 22-04-2016 HMPREF9228_RS04545 25f058909d863f6ac9abeaeee5c76022 394 Pfam PF02562 PhoH-like protein 149 351 5.0E-90 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 HMPREF9228_RS04545 25f058909d863f6ac9abeaeee5c76022 394 PANTHER PTHR30473:SF1 1 70 1.2E-138 T 22-04-2016 HMPREF9228_RS04545 25f058909d863f6ac9abeaeee5c76022 394 Gene3D G3DSA:3.40.50.300 148 350 1.1E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04545 25f058909d863f6ac9abeaeee5c76022 394 SUPERFAMILY SSF52540 148 309 1.02E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04545 25f058909d863f6ac9abeaeee5c76022 394 PANTHER PTHR30473 100 374 1.2E-138 T 22-04-2016 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 PIRSF PIRSF002191 1 121 1.6E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 PANTHER PTHR15680 16 117 7.5E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 116 29.623 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 115 4.3E-46 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 SUPERFAMILY SSF50104 3 117 5.72E-44 T 22-04-2016 IPR008991 Translation protein SH3-like domain HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 Pfam PF01245 Ribosomal protein L19 5 114 3.8E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 PRINTS PR00061 Ribosomal protein L19 signature 6 35 2.6E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 PRINTS PR00061 Ribosomal protein L19 signature 90 115 2.6E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02045 b974f5892aad6cb1e91c0fe3984e6326 121 PRINTS PR00061 Ribosomal protein L19 signature 36 65 2.6E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 SUPERFAMILY SSF53474 235 402 3.99E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 SUPERFAMILY SSF53474 131 201 3.99E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 SUPERFAMILY SSF53474 40 67 3.99E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 PANTHER PTHR23024 230 382 2.4E-52 T 22-04-2016 HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 PANTHER PTHR23024 134 197 2.4E-52 T 22-04-2016 HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 PANTHER PTHR23024:SF24 230 382 2.4E-52 T 22-04-2016 HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 PANTHER PTHR23024:SF24 134 197 2.4E-52 T 22-04-2016 HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 Gene3D G3DSA:3.40.50.1820 237 402 6.0E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 Gene3D G3DSA:3.40.50.1820 138 203 6.0E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 Gene3D G3DSA:3.40.50.1820 14 76 6.0E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06245 fc3b93595c424436c5982612798d205f 432 Pfam PF07859 alpha/beta hydrolase fold 139 381 3.2E-67 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 HMPREF9228_RS04565 c70e50f7a1593c33234987c28b023215 292 PANTHER PTHR12029:SF52 1 292 3.9E-93 T 22-04-2016 HMPREF9228_RS04565 c70e50f7a1593c33234987c28b023215 292 Gene3D G3DSA:3.30.1330.30 8 110 8.3E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like HMPREF9228_RS04565 c70e50f7a1593c33234987c28b023215 292 SUPERFAMILY SSF75217 103 291 1.37E-32 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS04565 c70e50f7a1593c33234987c28b023215 292 PANTHER PTHR12029 1 292 3.9E-93 T 22-04-2016 HMPREF9228_RS04565 c70e50f7a1593c33234987c28b023215 292 SUPERFAMILY SSF55315 5 111 6.12E-16 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like HMPREF9228_RS04565 c70e50f7a1593c33234987c28b023215 292 Pfam PF00588 SpoU rRNA Methylase family 126 289 3.0E-26 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 HMPREF9228_RS04565 c70e50f7a1593c33234987c28b023215 292 Gene3D G3DSA:3.40.1280.10 118 291 7.1E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS03875 dc5586988caf3fba6421b7144d540cbe 337 PANTHER PTHR36834 4 229 7.4E-21 T 22-04-2016 HMPREF9228_RS03875 dc5586988caf3fba6421b7144d540cbe 337 PANTHER PTHR36834:SF1 4 229 7.4E-21 T 22-04-2016 HMPREF9228_RS03875 dc5586988caf3fba6421b7144d540cbe 337 Pfam PF06271 RDD family 197 336 3.7E-8 T 22-04-2016 IPR010432 RDD HMPREF9228_RS03875 dc5586988caf3fba6421b7144d540cbe 337 Pfam PF04892 VanZ like family 52 179 4.7E-20 T 22-04-2016 IPR006976 VanZ-like HMPREF9228_RS06795 db331ab3f4ec98ef499e2df177f7927d 454 PANTHER PTHR37560:SF2 1 454 3.9E-204 T 22-04-2016 HMPREF9228_RS06795 db331ab3f4ec98ef499e2df177f7927d 454 Gene3D G3DSA:3.20.70.20 1 454 2.0E-213 T 22-04-2016 HMPREF9228_RS06795 db331ab3f4ec98ef499e2df177f7927d 454 Hamap MF_01221 UPF0210 protein . 2 454 49.955 T 22-04-2016 IPR007841 Uncharacterised protein family UPF0210 HMPREF9228_RS06795 db331ab3f4ec98ef499e2df177f7927d 454 PANTHER PTHR37560 1 454 3.9E-204 T 22-04-2016 HMPREF9228_RS06795 db331ab3f4ec98ef499e2df177f7927d 454 Pfam PF05167 Uncharacterised ACR (DUF711) 13 418 1.1E-178 T 22-04-2016 IPR007841 Uncharacterised protein family UPF0210 HMPREF9228_RS06795 db331ab3f4ec98ef499e2df177f7927d 454 SUPERFAMILY SSF51998 2 449 1.01E-176 T 22-04-2016 HMPREF9228_RS08950 cfb85dea3b03a60c0ce1797697a0c1b1 674 PANTHER PTHR10569 344 658 7.1E-89 T 22-04-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 HMPREF9228_RS08950 cfb85dea3b03a60c0ce1797697a0c1b1 674 PANTHER PTHR10569 243 318 7.1E-89 T 22-04-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 HMPREF9228_RS08950 cfb85dea3b03a60c0ce1797697a0c1b1 674 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 42 219 1.2E-14 T 22-04-2016 IPR032856 Putative glycogen debranching enzyme, N-terminal HMPREF9228_RS08950 cfb85dea3b03a60c0ce1797697a0c1b1 674 SUPERFAMILY SSF48208 239 653 2.84E-59 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 HMPREF9228_RS08950 cfb85dea3b03a60c0ce1797697a0c1b1 674 Pfam PF06202 Amylo-alpha-1,6-glucosidase 278 640 3.2E-7 T 22-04-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 HMPREF9228_RS08950 cfb85dea3b03a60c0ce1797697a0c1b1 674 PANTHER PTHR10569:SF1 344 658 7.1E-89 T 22-04-2016 HMPREF9228_RS08950 cfb85dea3b03a60c0ce1797697a0c1b1 674 PANTHER PTHR10569:SF1 243 318 7.1E-89 T 22-04-2016 HMPREF9228_RS05070 a8888f3fd2063b1c10fe2c097281efb2 300 PANTHER PTHR31223:SF1 82 294 2.2E-89 T 22-04-2016 HMPREF9228_RS05070 a8888f3fd2063b1c10fe2c097281efb2 300 PANTHER PTHR31223 82 294 2.2E-89 T 22-04-2016 HMPREF9228_RS05070 a8888f3fd2063b1c10fe2c097281efb2 300 Pfam PF03641 Possible lysine decarboxylase 165 293 4.4E-32 T 22-04-2016 IPR031100 LOG family HMPREF9228_RS05070 a8888f3fd2063b1c10fe2c097281efb2 300 Gene3D G3DSA:3.40.50.450 102 294 5.6E-65 T 22-04-2016 HMPREF9228_RS05070 a8888f3fd2063b1c10fe2c097281efb2 300 SUPERFAMILY SSF102405 93 293 1.34E-60 T 22-04-2016 HMPREF9228_RS05070 a8888f3fd2063b1c10fe2c097281efb2 300 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 123 293 6.7E-37 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG HMPREF9228_RS00830 bb862b2548d8c0643563f6f715334f16 222 SUPERFAMILY SSF51366 7 219 5.53E-59 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS00830 bb862b2548d8c0643563f6f715334f16 222 PANTHER PTHR36204:SF1 1 218 1.3E-82 T 22-04-2016 HMPREF9228_RS00830 bb862b2548d8c0643563f6f715334f16 222 Gene3D G3DSA:3.20.20.70 2 221 4.9E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS00830 bb862b2548d8c0643563f6f715334f16 222 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 30 221 1.0E-54 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 HMPREF9228_RS00830 bb862b2548d8c0643563f6f715334f16 222 PANTHER PTHR36204 1 218 1.3E-82 T 22-04-2016 HMPREF9228_RS00830 bb862b2548d8c0643563f6f715334f16 222 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 6 222 33.694 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 HMPREF9228_RS09160 6e1297140d67fb79fda12329dbcb9c15 319 Gene3D G3DSA:3.20.20.140 17 318 9.0E-66 T 22-04-2016 HMPREF9228_RS09160 6e1297140d67fb79fda12329dbcb9c15 319 Pfam PF01026 TatD related DNase 25 317 1.3E-53 T 22-04-2016 IPR001130 TatD family GO:0016788 HMPREF9228_RS09160 6e1297140d67fb79fda12329dbcb9c15 319 PANTHER PTHR10060:SF20 136 319 8.2E-73 T 22-04-2016 HMPREF9228_RS09160 6e1297140d67fb79fda12329dbcb9c15 319 PANTHER PTHR10060:SF20 57 118 8.2E-73 T 22-04-2016 HMPREF9228_RS09160 6e1297140d67fb79fda12329dbcb9c15 319 PANTHER PTHR10060 136 319 8.2E-73 T 22-04-2016 IPR001130 TatD family GO:0016788 HMPREF9228_RS09160 6e1297140d67fb79fda12329dbcb9c15 319 PANTHER PTHR10060 57 118 8.2E-73 T 22-04-2016 IPR001130 TatD family GO:0016788 HMPREF9228_RS09160 6e1297140d67fb79fda12329dbcb9c15 319 PIRSF PIRSF005902 1 319 2.9E-67 T 22-04-2016 IPR001130 TatD family GO:0016788 HMPREF9228_RS09160 6e1297140d67fb79fda12329dbcb9c15 319 SUPERFAMILY SSF51556 24 318 8.86E-61 T 22-04-2016 IPR032466 Metal-dependent hydrolase HMPREF9228_RS04190 8da74d88834754e50107f94408e2fd9e 316 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 6 305 5.1E-75 T 22-04-2016 HMPREF9228_RS04190 8da74d88834754e50107f94408e2fd9e 316 Pfam PF02650 WhiA C-terminal HTH domain 222 304 7.0E-21 T 22-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal HMPREF9228_RS04190 8da74d88834754e50107f94408e2fd9e 316 PANTHER PTHR37307 2 306 8.5E-67 T 22-04-2016 HMPREF9228_RS04190 8da74d88834754e50107f94408e2fd9e 316 Pfam PF14527 WhiA LAGLIDADG-like domain 128 219 2.3E-25 T 22-04-2016 HMPREF9228_RS04190 8da74d88834754e50107f94408e2fd9e 316 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 22 105 9.0E-16 T 22-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain HMPREF9228_RS04190 8da74d88834754e50107f94408e2fd9e 316 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 26.476 T 22-04-2016 IPR003802 Sporulation regulator WhiA GO:0043937 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 Gene3D G3DSA:2.40.50.140 2 123 1.3E-63 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 PANTHER PTHR11652 2 116 1.6E-70 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.6E-58 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 Pfam PF00164 Ribosomal protein S12/S23 5 123 2.8E-41 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 SUPERFAMILY SSF50249 2 122 5.65E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 PIRSF PIRSF002133 1 123 2.2E-52 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 2.0E-66 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06200 05146c99d2b13748849f4b2b76463f04 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.882 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06220 4ef9809f86a637e63464d23b84f8f8a4 386 PANTHER PTHR12526:SF397 6 386 1.0E-18 T 22-04-2016 HMPREF9228_RS06220 4ef9809f86a637e63464d23b84f8f8a4 386 Pfam PF13439 Glycosyltransferase Family 4 28 190 3.3E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain HMPREF9228_RS06220 4ef9809f86a637e63464d23b84f8f8a4 386 Pfam PF00534 Glycosyl transferases group 1 211 358 4.5E-17 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 HMPREF9228_RS06220 4ef9809f86a637e63464d23b84f8f8a4 386 Gene3D G3DSA:3.40.50.2000 210 313 1.9E-9 T 22-04-2016 HMPREF9228_RS06220 4ef9809f86a637e63464d23b84f8f8a4 386 SUPERFAMILY SSF53756 16 378 2.24E-45 T 22-04-2016 HMPREF9228_RS06220 4ef9809f86a637e63464d23b84f8f8a4 386 PANTHER PTHR12526 6 386 1.0E-18 T 22-04-2016 HMPREF9228_RS00780 cf0ffc4073ff84c157d0b3c6d44aacab 374 Gene3D G3DSA:3.40.190.10 9 151 9.5E-25 T 22-04-2016 HMPREF9228_RS00780 cf0ffc4073ff84c157d0b3c6d44aacab 374 Gene3D G3DSA:3.40.190.10 294 344 9.5E-25 T 22-04-2016 HMPREF9228_RS00780 cf0ffc4073ff84c157d0b3c6d44aacab 374 SUPERFAMILY SSF53850 49 355 3.01E-50 T 22-04-2016 HMPREF9228_RS00780 cf0ffc4073ff84c157d0b3c6d44aacab 374 PANTHER PTHR30006 2 325 4.0E-30 T 22-04-2016 HMPREF9228_RS00780 cf0ffc4073ff84c157d0b3c6d44aacab 374 PANTHER PTHR30006:SF10 2 325 4.0E-30 T 22-04-2016 HMPREF9228_RS00780 cf0ffc4073ff84c157d0b3c6d44aacab 374 Pfam PF13343 Bacterial extracellular solute-binding protein 108 345 2.0E-34 T 22-04-2016 HMPREF9228_RS00780 cf0ffc4073ff84c157d0b3c6d44aacab 374 Gene3D G3DSA:3.40.190.10 153 293 3.4E-23 T 22-04-2016 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 SUPERFAMILY SSF56796 468 882 4.06E-106 T 22-04-2016 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 739 759 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 Pfam PF00465 Iron-containing alcohol dehydrogenase 474 871 6.5E-105 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 Gene3D G3DSA:3.40.309.10 331 422 2.7E-29 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 Gene3D G3DSA:3.40.309.10 240 288 2.7E-29 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 SUPERFAMILY SSF53720 339 471 6.81E-80 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 SUPERFAMILY SSF53720 22 312 6.81E-80 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 Pfam PF00171 Aldehyde dehydrogenase family 18 418 2.5E-22 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 Gene3D G3DSA:1.20.1090.10 661 877 1.1E-63 T 22-04-2016 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 PIRSF PIRSF000111 7 884 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 Gene3D G3DSA:3.40.50.1970 467 660 3.8E-59 T 22-04-2016 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 PANTHER PTHR11496:SF79 385 885 2.2E-252 T 22-04-2016 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 Gene3D G3DSA:3.40.605.10 17 239 1.8E-22 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS08215 8e12ae5001164762dbb8ca5a625ded91 907 PANTHER PTHR11496 385 885 2.2E-252 T 22-04-2016 HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 PANTHER PTHR22572 8 385 2.2E-137 T 22-04-2016 HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 PANTHER PTHR22572:SF10 8 385 2.2E-137 T 22-04-2016 HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 SUPERFAMILY SSF51161 301 413 2.98E-17 T 22-04-2016 IPR011004 Trimeric LpxA-like HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 4 412 45.249 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 Pfam PF00483 Nucleotidyl transferase 9 278 3.6E-65 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 Gene3D G3DSA:3.90.550.10 10 289 3.3E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 Gene3D G3DSA:3.90.550.10 332 375 3.3E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 SUPERFAMILY SSF53448 5 282 8.11E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 SUPERFAMILY SSF53448 349 363 8.11E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 8 385 1.3E-131 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 HMPREF9228_RS04570 611ca3c506c439c580ac0b9dfba58132 414 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 13 32 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 HMPREF9228_RS03580 dde9886cabed709d0d0a1a82815c56de 293 PANTHER PTHR18966 65 265 1.7E-13 T 22-04-2016 HMPREF9228_RS03580 dde9886cabed709d0d0a1a82815c56de 293 Gene3D G3DSA:3.40.190.10 156 228 2.4E-8 T 22-04-2016 HMPREF9228_RS03580 dde9886cabed709d0d0a1a82815c56de 293 SUPERFAMILY SSF53850 18 266 2.34E-41 T 22-04-2016 HMPREF9228_RS03580 dde9886cabed709d0d0a1a82815c56de 293 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 266 5.3E-39 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS03580 dde9886cabed709d0d0a1a82815c56de 293 PANTHER PTHR18966:SF207 65 265 1.7E-13 T 22-04-2016 HMPREF9228_RS03580 dde9886cabed709d0d0a1a82815c56de 293 Gene3D G3DSA:3.40.190.10 234 267 6.6E-24 T 22-04-2016 HMPREF9228_RS03580 dde9886cabed709d0d0a1a82815c56de 293 Gene3D G3DSA:3.40.190.10 47 136 6.6E-24 T 22-04-2016 HMPREF9228_RS03580 dde9886cabed709d0d0a1a82815c56de 293 SMART SM00062 48 274 1.2E-34 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS07490 74b64c5e67c806d3312e97cef65db285 187 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 14 178 4.3E-56 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 HMPREF9228_RS07490 74b64c5e67c806d3312e97cef65db285 187 PANTHER PTHR22573 1 183 9.9E-65 T 22-04-2016 HMPREF9228_RS07490 74b64c5e67c806d3312e97cef65db285 187 Pfam PF00156 Phosphoribosyl transferase domain 16 164 5.2E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 HMPREF9228_RS07490 74b64c5e67c806d3312e97cef65db285 187 PANTHER PTHR22573:SF56 1 183 9.9E-65 T 22-04-2016 HMPREF9228_RS07490 74b64c5e67c806d3312e97cef65db285 187 Gene3D G3DSA:3.40.50.2020 4 184 3.2E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS07490 74b64c5e67c806d3312e97cef65db285 187 SUPERFAMILY SSF53271 6 183 3.67E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS07610 b90cec3892ce6ce53cc1bbe6395fd607 184 Pfam PF13470 PIN domain 2 110 1.4E-14 T 22-04-2016 IPR002716 PIN domain HMPREF9228_RS07610 b90cec3892ce6ce53cc1bbe6395fd607 184 SUPERFAMILY SSF88723 1 114 3.36E-7 T 22-04-2016 IPR029060 PIN domain-like HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 Pfam PF05697 Bacterial trigger factor protein (TF) 2 148 4.2E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 TIGRFAM TIGR00115 tig: trigger factor 11 396 1.2E-105 T 22-04-2016 IPR005215 Trigger factor GO:0015031 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 SUPERFAMILY SSF54534 137 246 3.14E-21 T 22-04-2016 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 Hamap MF_00303 Trigger factor [tig]. 1 419 17.173 T 22-04-2016 IPR005215 Trigger factor GO:0015031 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 PANTHER PTHR30560 1 423 3.7E-77 T 22-04-2016 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 Gene3D G3DSA:3.10.50.40 161 211 1.6E-5 T 22-04-2016 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 PIRSF PIRSF003095 1 432 8.7E-107 T 22-04-2016 IPR005215 Trigger factor GO:0015031 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 SUPERFAMILY SSF102735 2 134 2.75E-33 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 SUPERFAMILY SSF109998 247 396 5.36E-26 T 22-04-2016 IPR027304 Trigger factor/SurA domain HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 217 1.5E-6 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 Gene3D G3DSA:1.10.3120.10 212 381 2.1E-38 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 396 1.9E-18 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 HMPREF9228_RS05120 f3bee353bf20b7770557917edba0d33d 457 Gene3D G3DSA:3.30.70.1050 2 123 4.7E-33 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 PANTHER PTHR11938:SF75 10 324 5.0E-132 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 PANTHER PTHR11938:SF75 343 489 5.0E-132 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 PRINTS PR00419 Adrenodoxin reductase family signature 212 222 1.4E-24 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 PRINTS PR00419 Adrenodoxin reductase family signature 147 169 1.4E-24 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 PRINTS PR00419 Adrenodoxin reductase family signature 170 183 1.4E-24 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.4E-24 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 Gene3D G3DSA:3.40.50.720 428 497 3.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 Gene3D G3DSA:3.40.50.720 150 235 3.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 492 7.8E-183 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 478 1.4E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 Gene3D G3DSA:3.50.50.60 236 423 5.5E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 41 131 1.7E-20 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 SUPERFAMILY SSF46548 11 156 1.8E-35 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 SUPERFAMILY SSF51905 366 491 2.38E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 SUPERFAMILY SSF51905 284 315 2.38E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 Gene3D G3DSA:1.10.1060.10 11 149 7.3E-35 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 SUPERFAMILY SSF51971 144 370 1.26E-63 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 SUPERFAMILY SSF51971 407 423 1.26E-63 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 PANTHER PTHR11938 10 324 5.0E-132 T 22-04-2016 HMPREF9228_RS04455 51a0514faa0bb417d91334f938b3f45c 511 PANTHER PTHR11938 343 489 5.0E-132 T 22-04-2016 HMPREF9228_RS05195 3969ba73391aa55d87aaa9db1ac1d8fc 128 Pfam PF02410 Ribosomal silencing factor during starvation 15 110 6.3E-23 T 22-04-2016 HMPREF9228_RS05195 3969ba73391aa55d87aaa9db1ac1d8fc 128 PANTHER PTHR21043 6 120 3.0E-29 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS HMPREF9228_RS05195 3969ba73391aa55d87aaa9db1ac1d8fc 128 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 111 22.932 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS HMPREF9228_RS05195 3969ba73391aa55d87aaa9db1ac1d8fc 128 Gene3D G3DSA:3.30.460.10 7 113 2.4E-32 T 22-04-2016 HMPREF9228_RS05195 3969ba73391aa55d87aaa9db1ac1d8fc 128 SUPERFAMILY SSF81301 6 119 2.94E-35 T 22-04-2016 HMPREF9228_RS05195 3969ba73391aa55d87aaa9db1ac1d8fc 128 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 12 110 8.0E-29 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS HMPREF9228_RS04885 6334e68dbf2843c83e01bd6a54b5c24d 537 SUPERFAMILY SSF53756 1 535 3.77E-195 T 22-04-2016 HMPREF9228_RS04885 6334e68dbf2843c83e01bd6a54b5c24d 537 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 378 390 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS04885 6334e68dbf2843c83e01bd6a54b5c24d 537 Gene3D G3DSA:3.40.50.2000 1 199 3.3E-85 T 22-04-2016 HMPREF9228_RS04885 6334e68dbf2843c83e01bd6a54b5c24d 537 Pfam PF00343 Carbohydrate phosphorylase 1 532 1.2E-222 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS04885 6334e68dbf2843c83e01bd6a54b5c24d 537 PANTHER PTHR11468:SF3 1 536 9.8E-273 T 22-04-2016 HMPREF9228_RS04885 6334e68dbf2843c83e01bd6a54b5c24d 537 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 1 532 1.3E-238 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS04885 6334e68dbf2843c83e01bd6a54b5c24d 537 PANTHER PTHR11468 1 536 9.8E-273 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS04885 6334e68dbf2843c83e01bd6a54b5c24d 537 Gene3D G3DSA:3.40.50.2000 200 518 1.6E-121 T 22-04-2016 HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 Pfam PF03793 PASTA domain 418 464 1.1E-9 T 22-04-2016 IPR005543 PASTA domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 Pfam PF03793 PASTA domain 612 662 1.4E-8 T 22-04-2016 IPR005543 PASTA domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 Pfam PF03793 PASTA domain 538 598 1.7E-9 T 22-04-2016 IPR005543 PASTA domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 Pfam PF03793 PASTA domain 472 534 1.2E-12 T 22-04-2016 IPR005543 PASTA domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 PANTHER PTHR24362:SF160 1 315 4.6E-103 T 22-04-2016 HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 20 43 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 SUPERFAMILY SSF56112 8 279 1.62E-77 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 Pfam PF00069 Protein kinase domain 14 273 1.2E-54 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 SMART SM00740 466 534 2.4E-13 T 22-04-2016 IPR005543 PASTA domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 SMART SM00740 398 465 1.4E-4 T 22-04-2016 IPR005543 PASTA domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 SMART SM00740 600 664 3.0E-4 T 22-04-2016 IPR005543 PASTA domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 SMART SM00740 538 599 0.082 T 22-04-2016 IPR005543 PASTA domain HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 Gene3D G3DSA:1.10.510.10 106 328 5.8E-50 T 22-04-2016 HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 142 154 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 PANTHER PTHR24362 1 315 4.6E-103 T 22-04-2016 HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 SMART SM00220 14 282 2.6E-65 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 HMPREF9228_RS00310 bd28f5ab98017813c0f8ae58cd863b29 683 Gene3D G3DSA:3.30.200.20 9 102 3.1E-25 T 22-04-2016 HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 PANTHER PTHR11695 12 346 8.4E-100 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 Gene3D G3DSA:3.90.180.10 1 167 5.8E-41 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 Gene3D G3DSA:3.40.50.720 168 287 2.8E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 SMART SM00829 10 334 2.5E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 PANTHER PTHR11695:SF451 12 346 8.4E-100 T 22-04-2016 HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 SUPERFAMILY SSF51735 139 308 3.8E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 Pfam PF00107 Zinc-binding dehydrogenase 177 303 6.8E-21 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 135 5.4E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 HMPREF9228_RS08225 b7fdd9fdb29a7da426115d3f8585ae15 346 SUPERFAMILY SSF50129 1 173 2.13E-47 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 256 1.1E-70 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 SUPERFAMILY SSF55920 1 256 3.27E-68 T 22-04-2016 IPR000994 Peptidase M24, structural domain HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 Hamap MF_01974 Methionine aminopeptidase [map]. 2 257 33.074 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 5.6E-18 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 5.6E-18 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 5.6E-18 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 5.6E-18 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 Pfam PF00557 Metallopeptidase family M24 11 248 6.1E-43 T 22-04-2016 IPR000994 Peptidase M24, structural domain HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 PANTHER PTHR10804 1 256 5.6E-76 T 22-04-2016 HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 PANTHER PTHR10804:SF41 1 256 5.6E-76 T 22-04-2016 HMPREF9228_RS07300 ca7a9b4112b698ef79da01bbba17b197 260 Gene3D G3DSA:3.90.230.10 1 257 5.2E-69 T 22-04-2016 IPR000994 Peptidase M24, structural domain HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 SUPERFAMILY SSF54814 188 266 1.7E-24 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 Gene3D G3DSA:3.30.300.20 266 334 3.6E-26 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 Pfam PF08529 NusA N-terminal domain 9 110 4.1E-14 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 Gene3D G3DSA:3.30.1480.10 5 109 1.9E-20 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 PANTHER PTHR22648 1 351 2.5E-108 T 22-04-2016 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 SUPERFAMILY SSF50249 119 187 1.42E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 SUPERFAMILY SSF69705 4 109 1.83E-20 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 347 25.243 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 SMART SM00322 218 281 11.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 SMART SM00322 290 347 0.028 T 22-04-2016 IPR004087 K Homology domain GO:0003676 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 Gene3D G3DSA:3.30.300.20 187 265 4.4E-29 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 PANTHER PTHR22648:SF0 1 351 2.5E-108 T 22-04-2016 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 Pfam PF13184 NusA-like KH domain 218 285 5.8E-21 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 SUPERFAMILY SSF54814 267 329 5.89E-14 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 Gene3D G3DSA:2.40.50.140 116 186 5.7E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08030 edf592b9604285a61175a68291f2de26 351 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 8 330 7.2E-96 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 Gene3D G3DSA:3.40.50.300 180 414 2.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 TIGRFAM TIGR03689 pup_AAA: proteasome ATPase 5 522 9.0E-210 T 22-04-2016 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 PANTHER PTHR23077 18 28 2.7E-78 T 22-04-2016 HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 PANTHER PTHR23077 176 255 2.7E-78 T 22-04-2016 HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 PANTHER PTHR23077 273 408 2.7E-78 T 22-04-2016 HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 PANTHER PTHR23077 441 470 2.7E-78 T 22-04-2016 HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 SMART SM00382 224 385 5.8E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 SUPERFAMILY SSF52540 186 465 2.42E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 ProSitePatterns PS00674 AAA-protein family signature. 353 371 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 Pfam PF16450 Proteasomal ATPase OB/ID domain 63 184 2.3E-32 T 22-04-2016 IPR032501 Proteasomal ATPase, OB/ID domain HMPREF9228_RS02315 88f5970d20fce13cade8c5e9e176a6ef 524 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 228 382 6.9E-43 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 SUPERFAMILY SSF51419 33 283 4.22E-51 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 TIGRFAM TIGR00492 alr: alanine racemase 29 431 2.9E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PANTHER PTHR30511:SF0 23 437 3.2E-111 T 22-04-2016 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 60 70 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 Pfam PF01168 Alanine racemase, N-terminal domain 33 267 3.6E-55 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 SUPERFAMILY SSF50621 274 433 2.41E-36 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 Gene3D G3DSA:3.20.20.10 36 259 6.0E-62 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PRINTS PR00992 Alanine racemase signature 156 168 9.2E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PRINTS PR00992 Alanine racemase signature 91 109 9.2E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PRINTS PR00992 Alanine racemase signature 240 267 9.2E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PRINTS PR00992 Alanine racemase signature 298 313 9.2E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PRINTS PR00992 Alanine racemase signature 315 330 9.2E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PRINTS PR00992 Alanine racemase signature 193 204 9.2E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PRINTS PR00992 Alanine racemase signature 55 71 9.2E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 SMART SM01005 282 432 1.9E-54 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 Gene3D G3DSA:2.40.37.10 260 435 8.1E-50 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 Pfam PF00842 Alanine racemase, C-terminal domain 282 431 2.3E-34 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 Hamap MF_01201 Alanine racemase. 26 432 29.444 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS06540 59cbd52ccb8f81876039e8ad6f6c0ca7 452 PANTHER PTHR30511 23 437 3.2E-111 T 22-04-2016 HMPREF9228_RS07035 501211181cbc0d1b09de7a399b905753 314 PANTHER PTHR32196 38 310 1.5E-76 T 22-04-2016 HMPREF9228_RS07035 501211181cbc0d1b09de7a399b905753 314 SUPERFAMILY SSF53822 21 313 1.57E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS07035 501211181cbc0d1b09de7a399b905753 314 Gene3D G3DSA:3.40.50.2300 151 303 9.4E-54 T 22-04-2016 HMPREF9228_RS07035 501211181cbc0d1b09de7a399b905753 314 Pfam PF13407 Periplasmic binding protein domain 40 292 5.6E-63 T 22-04-2016 IPR025997 Periplasmic binding protein HMPREF9228_RS07035 501211181cbc0d1b09de7a399b905753 314 Gene3D G3DSA:3.40.50.2300 39 150 1.9E-36 T 22-04-2016 HMPREF9228_RS07035 501211181cbc0d1b09de7a399b905753 314 PANTHER PTHR32196:SF9 38 310 1.5E-76 T 22-04-2016 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 Gene3D G3DSA:3.20.20.210 5 395 6.4E-127 T 22-04-2016 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 436 759 4.2E-138 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 9 764 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 322 2.7E-115 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 Gene3D G3DSA:3.20.20.210 399 765 6.6E-123 T 22-04-2016 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 SUPERFAMILY SSF51726 4 392 1.26E-87 T 22-04-2016 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 PANTHER PTHR30519 1 767 0.0 T 22-04-2016 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 764 33.952 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 PANTHER PTHR30519:SF0 1 767 0.0 T 22-04-2016 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 SUPERFAMILY SSF51726 401 763 1.7E-107 T 22-04-2016 HMPREF9228_RS04320 861575fefe1b9e23c1b38fc7693f86b4 767 PIRSF PIRSF000382 2 767 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 SMART SM00861 343 514 2.4E-23 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 ProSitePatterns PS00801 Transketolase signature 1. 60 79 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 Pfam PF02779 Transketolase, pyrimidine binding domain 351 488 2.5E-18 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 Gene3D G3DSA:3.40.50.920 550 681 1.2E-21 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 PANTHER PTHR11624:SF62 48 679 1.6E-179 T 22-04-2016 HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 Gene3D G3DSA:3.40.50.970 50 291 2.8E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 SUPERFAMILY SSF52922 551 682 1.06E-19 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 Gene3D G3DSA:3.40.50.970 330 516 6.5E-30 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 Pfam PF02780 Transketolase, C-terminal domain 550 675 1.9E-14 T 22-04-2016 IPR033248 Transketolase, C-terminal domain HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 PANTHER PTHR11624 48 679 1.6E-179 T 22-04-2016 IPR033247 Transketolase family HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 35 229 3.1E-70 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 SUPERFAMILY SSF52518 33 304 1.26E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS06435 afdd2ea6a68a4b9199eeacaafdc7a864 683 SUPERFAMILY SSF52518 326 509 1.11E-29 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 Gene3D G3DSA:2.60.40.10 130 250 4.8E-34 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 Gene3D G3DSA:2.60.40.10 25 123 2.6E-13 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 SUPERFAMILY SSF81296 27 131 6.8E-13 T 22-04-2016 IPR014756 Immunoglobulin E-set HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 Gene3D G3DSA:2.60.40.1180 647 749 2.2E-31 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 118 749 43.015 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 PANTHER PTHR10357:SF160 60 748 0.0 T 22-04-2016 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 SUPERFAMILY SSF51011 647 749 1.68E-26 T 22-04-2016 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 165 235 1.2E-17 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 PIRSF PIRSF000463 17 750 6.3E-288 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 SUPERFAMILY SSF51445 209 640 2.21E-109 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 SUPERFAMILY SSF81296 167 223 3.29E-9 T 22-04-2016 IPR014756 Immunoglobulin E-set HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 Pfam PF00128 Alpha amylase, catalytic domain 297 368 1.0E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 SMART SM00642 279 667 9.9E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 652 748 2.2E-18 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 126 747 6.4E-261 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 Gene3D G3DSA:3.20.20.80 274 635 1.0E-88 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS05375 65180e608a45917164e6d7030768ab50 750 PANTHER PTHR10357 60 748 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS07340 5cab0acd2d8c78249786829aff16b117 216 Pfam PF00929 Exonuclease 18 181 3.7E-21 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III HMPREF9228_RS07340 5cab0acd2d8c78249786829aff16b117 216 Hamap MF_00045 Oligoribonuclease [orn]. 12 192 36.731 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 HMPREF9228_RS07340 5cab0acd2d8c78249786829aff16b117 216 PANTHER PTHR11046 16 215 6.7E-72 T 22-04-2016 HMPREF9228_RS07340 5cab0acd2d8c78249786829aff16b117 216 PANTHER PTHR11046:SF5 16 215 6.7E-72 T 22-04-2016 HMPREF9228_RS07340 5cab0acd2d8c78249786829aff16b117 216 SMART SM00479 16 191 2.1E-22 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III HMPREF9228_RS07340 5cab0acd2d8c78249786829aff16b117 216 SUPERFAMILY SSF53098 12 190 3.79E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07340 5cab0acd2d8c78249786829aff16b117 216 Gene3D G3DSA:3.30.420.10 13 190 2.1E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 SUPERFAMILY SSF47413 2 52 5.63E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 PANTHER PTHR10584 308 618 4.0E-71 T 22-04-2016 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 PRINTS PR00990 Ribokinase signature 329 350 2.6E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 PRINTS PR00990 Ribokinase signature 496 511 2.6E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 PRINTS PR00990 Ribokinase signature 356 375 2.6E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 PRINTS PR00990 Ribokinase signature 536 547 2.6E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 PRINTS PR00990 Ribokinase signature 428 441 2.6E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 Pfam PF00294 pfkB family carbohydrate kinase 325 611 5.9E-54 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 SUPERFAMILY SSF53822 59 322 5.62E-25 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 Gene3D G3DSA:3.40.1190.20 325 623 1.4E-76 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 Gene3D G3DSA:3.40.50.2300 53 165 4.0E-18 T 22-04-2016 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 PANTHER PTHR10584:SF166 308 618 4.0E-71 T 22-04-2016 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 3.0E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 Gene3D G3DSA:1.10.260.40 1 52 9.9E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 Gene3D G3DSA:3.40.50.2300 166 296 1.4E-13 T 22-04-2016 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 SMART SM00354 1 69 1.2E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 Pfam PF13377 Periplasmic binding protein-like domain 162 302 5.8E-10 T 22-04-2016 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 565 578 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 HMPREF9228_RS07115 302dfcb5f79edc7527c4eaf08a38f278 633 SUPERFAMILY SSF53613 326 614 1.71E-69 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 608 617 1.1E-28 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 568 581 1.1E-28 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 433 448 1.1E-28 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 58 69 1.1E-28 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 1.1E-28 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 SUPERFAMILY SSF47323 705 955 8.22E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PANTHER PTHR11946 290 527 0.0 T 22-04-2016 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 Pfam PF08264 Anticodon-binding domain of tRNA 742 892 6.2E-26 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 SUPERFAMILY SSF52374 435 681 5.16E-123 T 22-04-2016 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 SUPERFAMILY SSF52374 22 215 5.16E-123 T 22-04-2016 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 Gene3D G3DSA:3.90.740.10 242 438 7.5E-43 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 22 908 2.0E-236 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 SUPERFAMILY SSF50677 220 409 4.06E-32 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PANTHER PTHR11946:SF87 290 527 0.0 T 22-04-2016 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 16 1101 13.7 T 22-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PANTHER PTHR11946:SF87 545 1002 0.0 T 22-04-2016 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 31 683 1.4E-165 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 Gene3D G3DSA:3.40.50.620 21 211 1.3E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 Gene3D G3DSA:3.40.50.620 439 680 1.3E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 65 76 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PANTHER PTHR11946 545 1002 0.0 T 22-04-2016 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PANTHER PTHR11946 9 262 0.0 T 22-04-2016 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 Gene3D G3DSA:1.10.730.10 695 886 2.3E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07020 fdbb9d7f4034dd367ff841704cbe99cb 1102 PANTHER PTHR11946:SF87 9 262 0.0 T 22-04-2016 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 310 4.7E-114 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 SUPERFAMILY SSF47789 247 318 3.92E-24 T 22-04-2016 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 SMART SM00662 18 225 1.1E-88 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 PANTHER PTHR32108 12 324 1.7E-130 T 22-04-2016 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 311 34.326 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 Gene3D G3DSA:2.170.120.12 61 168 5.8E-47 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 218 2.6E-19 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 SUPERFAMILY SSF55257 170 221 4.06E-26 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 SUPERFAMILY SSF55257 8 48 4.06E-26 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 Gene3D G3DSA:3.30.1360.10 6 60 4.0E-10 T 22-04-2016 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 150 8.8E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 SUPERFAMILY SSF56553 48 169 1.44E-42 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 302 5.8E-27 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 309 3.0E-28 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 PANTHER PTHR32108:SF0 12 324 1.7E-130 T 22-04-2016 HMPREF9228_RS08070 070a3f73937dc0822b95fb47ed585abc 331 Gene3D G3DSA:1.10.150.20 241 319 3.5E-32 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 SMART SM00746 834 872 8.8E-4 T 22-04-2016 IPR011017 TRASH domain HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 SUPERFAMILY SSF49503 34 127 4.29E-10 T 22-04-2016 IPR008972 Cupredoxin HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 Gene3D G3DSA:2.70.150.10 311 416 1.6E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 Gene3D G3DSA:2.70.150.10 238 279 1.6E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 SUPERFAMILY SSF47240 815 875 8.92E-5 T 22-04-2016 IPR009078 Ferritin-like superfamily HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 665 5.3E-6 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 532 5.3E-6 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 366 380 5.3E-6 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 SUPERFAMILY SSF81653 323 416 2.62E-23 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 Pfam PF00702 haloacid dehalogenase-like hydrolase 541 641 7.5E-21 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 PANTHER PTHR24093:SF50 146 736 1.3E-178 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 SUPERFAMILY SSF56784 516 733 2.65E-50 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 Pfam PF04945 YHS domain 832 877 8.9E-12 T 22-04-2016 IPR007029 YHS domain HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 Pfam PF13473 Cupredoxin-like domain 25 125 1.6E-16 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 PANTHER PTHR24093 146 736 1.3E-178 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 520 526 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 SUPERFAMILY SSF81665 262 309 3.79E-9 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 SUPERFAMILY SSF81665 417 510 3.79E-9 T 22-04-2016 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 533 1.4E-38 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 543 705 7.0E-31 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 Gene3D G3DSA:2.60.40.420 31 118 3.3E-5 T 22-04-2016 IPR008972 Cupredoxin HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 Pfam PF00122 E1-E2 ATPase 277 509 4.9E-60 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS01370 42b71b6f555f025cc87d15b7d76ccfd5 878 Gene3D G3DSA:3.40.50.1000 491 695 2.0E-47 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 7.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 7.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 192 7.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 Gene3D G3DSA:3.40.50.720 12 266 3.7E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 SUPERFAMILY SSF51735 16 266 1.39E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PANTHER PTHR24322 173 204 6.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PANTHER PTHR24322 57 157 6.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PANTHER PTHR24322 22 41 6.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 26 265 4.6E-58 T 22-04-2016 HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.0E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 3.0E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 3.0E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 3.0E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 3.0E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS00625 e0625ee6fb7a3e072bbce0988fca74a0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 3.0E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 SUPERFAMILY SSF51011 666 735 2.16E-11 T 22-04-2016 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 SUPERFAMILY SSF51445 197 540 2.34E-114 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 SUPERFAMILY SSF51445 569 645 2.34E-114 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 Gene3D G3DSA:3.20.20.80 209 645 2.4E-104 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 90 732 1.1E-214 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 PANTHER PTHR10357:SF74 98 653 1.3E-190 T 22-04-2016 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 PANTHER PTHR10357:SF74 684 779 1.3E-190 T 22-04-2016 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 SUPERFAMILY SSF81296 82 158 7.6E-24 T 22-04-2016 IPR014756 Immunoglobulin E-set HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 SUPERFAMILY SSF81296 16 45 7.6E-24 T 22-04-2016 IPR014756 Immunoglobulin E-set HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 Gene3D G3DSA:2.60.40.10 12 46 3.5E-36 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 Gene3D G3DSA:2.60.40.10 83 208 3.5E-36 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 SMART SM00642 212 642 1.5E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 87 138 1.4E-4 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 PANTHER PTHR10357 98 653 1.3E-190 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 PANTHER PTHR10357 684 779 1.3E-190 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 Pfam PF00128 Alpha amylase, catalytic domain 241 333 4.9E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS08255 4e085d11b2c37d8db77b295f55153b6a 815 Gene3D G3DSA:2.60.40.1180 666 756 2.0E-12 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 24 424 1.4E-124 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 Pfam PF00202 Aminotransferase class-III 32 424 1.1E-102 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 Gene3D G3DSA:3.90.1150.10 337 424 4.8E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 Gene3D G3DSA:3.90.1150.10 14 67 4.8E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 PANTHER PTHR11986 1 424 6.5E-150 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 Gene3D G3DSA:3.40.640.10 68 335 2.3E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 PIRSF PIRSF000521 6 428 4.5E-50 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 21 426 42.041 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 SUPERFAMILY SSF53383 24 424 5.57E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 289 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 HMPREF9228_RS05705 c600f66d4e7c8b5a0547d7ef9d7b4d26 431 PANTHER PTHR11986:SF79 1 424 6.5E-150 T 22-04-2016 HMPREF9228_RS05315 5b42f22cb863af80b84bdcfdfe73a730 199 PANTHER PTHR11839 59 190 1.6E-26 T 22-04-2016 HMPREF9228_RS05315 5b42f22cb863af80b84bdcfdfe73a730 199 Gene3D G3DSA:3.90.79.10 16 190 1.7E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS05315 5b42f22cb863af80b84bdcfdfe73a730 199 PANTHER PTHR11839:SF9 59 190 1.6E-26 T 22-04-2016 HMPREF9228_RS05315 5b42f22cb863af80b84bdcfdfe73a730 199 SUPERFAMILY SSF55811 18 189 2.98E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS05315 5b42f22cb863af80b84bdcfdfe73a730 199 Pfam PF00293 NUDIX domain 57 170 1.2E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 Gene3D G3DSA:3.40.50.300 387 617 1.9E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 Pfam PF00664 ABC transporter transmembrane region 31 293 2.7E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 SMART SM00382 414 607 2.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 SUPERFAMILY SSF52540 380 625 5.13E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 Pfam PF00005 ABC transporter 405 555 6.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 PANTHER PTHR24221 12 338 1.2E-209 T 22-04-2016 HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 PANTHER PTHR24221 375 634 1.2E-209 T 22-04-2016 HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 Gene3D G3DSA:1.20.1560.10 15 333 3.1E-75 T 22-04-2016 HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 SUPERFAMILY SSF90123 15 333 5.23E-77 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS09170 1281678cd63a3cf55dc79ddce6227680 636 ProSitePatterns PS00211 ABC transporters family signature. 527 541 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 SUPERFAMILY SSF56112 17 291 4.99E-49 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 Gene3D G3DSA:1.10.510.10 150 290 1.5E-27 T 22-04-2016 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 Pfam PF00069 Protein kinase domain 21 286 6.2E-33 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 PANTHER PTHR24362:SF247 79 286 2.2E-54 T 22-04-2016 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 PANTHER PTHR24362:SF247 11 60 2.2E-54 T 22-04-2016 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 SMART SM00220 21 297 3.3E-37 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 Gene3D G3DSA:3.30.200.20 17 149 1.2E-20 T 22-04-2016 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 27 49 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 158 170 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 PANTHER PTHR24362 79 286 2.2E-54 T 22-04-2016 HMPREF9228_RS09680 07d33aa32c8514b720e4ccc5f3afa5ba 733 PANTHER PTHR24362 11 60 2.2E-54 T 22-04-2016 HMPREF9228_RS01785 8c7fb5d35815bd09125c03a8e6681acb 515 SUPERFAMILY SSF49478 366 447 5.1E-7 T 22-04-2016 HMPREF9228_RS01785 8c7fb5d35815bd09125c03a8e6681acb 515 Pfam PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain 233 346 1.6E-13 T 22-04-2016 IPR032334 Gram-positive pilin backbone subunit 2, Cna-B-like domain HMPREF9228_RS01785 8c7fb5d35815bd09125c03a8e6681acb 515 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 219 340 2.4E-16 T 22-04-2016 IPR026466 Fimbrial isopeptide formation D2 domain HMPREF9228_RS01785 8c7fb5d35815bd09125c03a8e6681acb 515 Pfam PF05738 Cna protein B-type domain 373 443 6.6E-7 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain HMPREF9228_RS01785 8c7fb5d35815bd09125c03a8e6681acb 515 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 476 507 0.0035 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 PANTHER PTHR24220 20 30 2.9E-96 T 22-04-2016 HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 PANTHER PTHR24220 55 258 2.9E-96 T 22-04-2016 HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 Gene3D G3DSA:3.40.50.300 10 252 4.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 PANTHER PTHR24220:SF117 20 30 2.9E-96 T 22-04-2016 HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 PANTHER PTHR24220:SF117 55 258 2.9E-96 T 22-04-2016 HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 SMART SM00382 67 238 1.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 SUPERFAMILY SSF52540 51 254 4.97E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 Pfam PF00005 ABC transporter 58 189 6.2E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09075 9044642a488be998efe8d1a1f89d92d2 407 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 SUPERFAMILY SSF63418 1 99 2.22E-23 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 Gene3D G3DSA:3.40.1190.10 85 319 4.0E-65 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 Gene3D G3DSA:3.90.190.20 325 480 1.1E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 SUPERFAMILY SSF53623 110 319 2.62E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 Pfam PF01225 Mur ligase family, catalytic domain 32 97 3.8E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 Pfam PF08245 Mur ligase middle domain 115 304 4.0E-42 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 SUPERFAMILY SSF53244 338 479 1.26E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 PANTHER PTHR23135:SF3 13 478 4.5E-124 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 PANTHER PTHR23135 13 478 4.5E-124 T 22-04-2016 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 414 3.6E-12 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 Gene3D G3DSA:3.40.1390.10 1 84 1.5E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 478 2.0E-114 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS02940 034ad17b8b61a91fb53d6b8b28416ce4 481 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 481 31.476 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PANTHER PTHR11922:SF2 6 517 4.1E-257 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 SUPERFAMILY SSF52317 6 196 1.97E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 Pfam PF00117 Glutamine amidotransferase class-I 8 188 5.7E-42 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 Gene3D G3DSA:3.40.50.620 197 394 8.9E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 3.6E-5 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 3.6E-5 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 3.6E-5 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 SUPERFAMILY SSF52402 182 440 4.85E-56 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 188 4.7E-71 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 520 2.1E-146 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 Pfam PF00958 GMP synthase C terminal domain 427 519 2.1E-37 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 Gene3D G3DSA:3.40.50.880 6 189 1.2E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.0E-4 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00097 Anthranilate synthase component II signature 77 88 1.0E-4 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00097 Anthranilate synthase component II signature 50 59 1.0E-4 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 SUPERFAMILY SSF54810 399 520 2.75E-45 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PANTHER PTHR11922 6 517 4.1E-257 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 520 53.773 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 3.5E-7 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 3.5E-7 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 3.5E-7 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 Gene3D G3DSA:3.30.300.10 395 520 7.6E-48 T 22-04-2016 HMPREF9228_RS05210 792cf42a41f954bb2bb5057fde97e6e1 520 Pfam PF02540 NAD synthase 202 280 1.4E-7 T 22-04-2016 IPR022310 NAD/GMP synthase HMPREF9228_RS03140 ddf782138a8318f5fc8a06598c23b98b 238 PANTHER PTHR34298 11 237 1.3E-50 T 22-04-2016 HMPREF9228_RS03140 ddf782138a8318f5fc8a06598c23b98b 238 Pfam PF04079 Segregation and condensation complex subunit ScpB 53 216 7.9E-52 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 HMPREF9228_RS03140 ddf782138a8318f5fc8a06598c23b98b 238 Gene3D G3DSA:1.10.10.10 134 207 7.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03140 ddf782138a8318f5fc8a06598c23b98b 238 SUPERFAMILY SSF46785 134 207 3.58E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03140 ddf782138a8318f5fc8a06598c23b98b 238 Gene3D G3DSA:1.10.10.10 48 130 9.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03140 ddf782138a8318f5fc8a06598c23b98b 238 PANTHER PTHR34298:SF2 11 237 1.3E-50 T 22-04-2016 HMPREF9228_RS03140 ddf782138a8318f5fc8a06598c23b98b 238 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 51 218 1.7E-33 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 HMPREF9228_RS03140 ddf782138a8318f5fc8a06598c23b98b 238 SUPERFAMILY SSF46785 50 129 3.75E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PANTHER PTHR22912 5 310 5.4E-105 T 22-04-2016 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 SUPERFAMILY SSF52833 508 535 1.79E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 SUPERFAMILY SSF52833 540 633 1.51E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 Gene3D G3DSA:3.50.50.60 120 232 4.2E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 Gene3D G3DSA:3.40.30.10 483 528 1.9E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 Gene3D G3DSA:3.40.30.10 372 430 1.9E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PANTHER PTHR22912:SF175 5 310 5.4E-105 T 22-04-2016 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.6E-31 T 22-04-2016 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.6E-31 T 22-04-2016 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 1.6E-31 T 22-04-2016 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.6E-31 T 22-04-2016 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.6E-31 T 22-04-2016 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 Pfam PF13192 Thioredoxin domain 554 610 2.8E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.3E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 Gene3D G3DSA:3.50.50.60 6 119 3.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 Gene3D G3DSA:3.50.50.60 249 311 3.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.9E-56 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.9E-56 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 240 261 2.9E-56 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.9E-56 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 2.9E-56 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 2.9E-56 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 2.9E-56 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.9E-56 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 TIGRFAM TIGR03143 AhpF_homolog: putative alkyl hydroperoxide reductase F subunit 4 634 8.1E-267 T 22-04-2016 IPR017561 Alkyl hydroperoxide reductase F subunit homogue, putative HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 SUPERFAMILY SSF51905 3 310 1.87E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00120 bea31521e53be10dd43dab2584bd5611 635 Gene3D G3DSA:3.40.30.10 540 633 1.1E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PANTHER PTHR10992:SF698 187 266 4.9E-34 T 22-04-2016 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PANTHER PTHR10992:SF698 148 169 4.9E-34 T 22-04-2016 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PANTHER PTHR10992:SF698 7 132 4.9E-34 T 22-04-2016 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.2E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.2E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 1.2E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 1.2E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 Pfam PF12697 Alpha/beta hydrolase family 19 257 2.0E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 Gene3D G3DSA:3.40.50.1820 7 265 3.5E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PANTHER PTHR10992 187 266 4.9E-34 T 22-04-2016 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PANTHER PTHR10992 148 169 4.9E-34 T 22-04-2016 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 PANTHER PTHR10992 7 132 4.9E-34 T 22-04-2016 HMPREF9228_RS04745 8632da3b83b43115f505abf09b632d0e 273 SUPERFAMILY SSF53474 7 264 2.96E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS03335 1abdee7ef0403140c46207745b2b7879 185 SUPERFAMILY SSF142433 13 177 4.05E-36 T 22-04-2016 IPR008136 CinA, C-terminal HMPREF9228_RS03335 1abdee7ef0403140c46207745b2b7879 185 Gene3D G3DSA:3.90.950.20 10 176 1.2E-50 T 22-04-2016 IPR008136 CinA, C-terminal HMPREF9228_RS03335 1abdee7ef0403140c46207745b2b7879 185 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 24 176 6.3E-24 T 22-04-2016 IPR008136 CinA, C-terminal HMPREF9228_RS03335 1abdee7ef0403140c46207745b2b7879 185 PANTHER PTHR13939 28 176 1.1E-30 T 22-04-2016 HMPREF9228_RS03335 1abdee7ef0403140c46207745b2b7879 185 Pfam PF02464 Competence-damaged protein 15 176 3.6E-35 T 22-04-2016 IPR008136 CinA, C-terminal HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 SUPERFAMILY SSF55347 202 510 9.48E-110 T 22-04-2016 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 PANTHER PTHR23429 16 510 5.4E-230 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 25 511 3.6E-193 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 29 212 6.4E-60 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 Gene3D G3DSA:3.40.50.720 24 211 3.6E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 PIRSF PIRSF000110 8 512 1.2E-176 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 SUPERFAMILY SSF51735 12 215 8.66E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 351 377 1.5E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 192 220 1.5E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 181 1.5E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 262 278 1.5E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 244 261 1.5E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 25 511 84.524 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 202 208 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 PANTHER PTHR23429:SF0 16 510 5.4E-230 T 22-04-2016 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 Gene3D G3DSA:3.30.360.10 212 510 5.1E-118 T 22-04-2016 HMPREF9228_RS01185 8437bda7eed7abf5775605a56ad6b3b1 512 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 214 510 1.4E-111 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 SUPERFAMILY SSF55424 369 495 9.11E-25 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 SUPERFAMILY SSF51905 159 360 1.94E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 SUPERFAMILY SSF51905 1 125 1.94E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 371 485 9.7E-20 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 Gene3D G3DSA:3.30.390.30 366 490 8.0E-32 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PANTHER PTHR22912:SF125 1 120 2.2E-132 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PANTHER PTHR22912:SF125 161 489 2.2E-132 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 351 3.2E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 Gene3D G3DSA:3.50.50.60 185 297 5.9E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 338 2.9E-30 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 201 219 2.9E-30 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.9E-30 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 2.9E-30 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 307 2.9E-30 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 453 1.4E-57 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 388 1.4E-57 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 460 480 1.4E-57 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 292 306 1.4E-57 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.4E-57 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 201 226 1.4E-57 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 331 338 1.4E-57 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.4E-57 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PANTHER PTHR22912 1 120 2.2E-132 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 PANTHER PTHR22912 161 489 2.2E-132 T 22-04-2016 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 Gene3D G3DSA:3.50.50.60 3 174 2.9E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 Gene3D G3DSA:3.50.50.60 299 364 2.9E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05770 689887968a829dd49f3280f9f0ef568b 497 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 HMPREF9228_RS08845 7d535effb4b58948e68d8c731a3cb943 167 PANTHER PTHR30175 19 115 7.2E-36 T 22-04-2016 HMPREF9228_RS08845 7d535effb4b58948e68d8c731a3cb943 167 Gene3D G3DSA:2.70.70.10 16 165 7.1E-55 T 22-04-2016 HMPREF9228_RS08845 7d535effb4b58948e68d8c731a3cb943 167 PANTHER PTHR30175:SF5 19 115 7.2E-36 T 22-04-2016 HMPREF9228_RS08845 7d535effb4b58948e68d8c731a3cb943 167 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 20 140 1.3E-43 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS08845 7d535effb4b58948e68d8c731a3cb943 167 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 19 141 4.1E-48 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS08845 7d535effb4b58948e68d8c731a3cb943 167 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 82 94 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS08845 7d535effb4b58948e68d8c731a3cb943 167 SUPERFAMILY SSF51261 16 164 7.67E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 Pfam PF00701 Dihydrodipicolinate synthetase family 7 297 3.7E-63 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 9.0E-16 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 9.0E-16 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 9.0E-16 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 9.0E-16 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 Gene3D G3DSA:3.20.20.70 4 297 8.6E-81 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 PIRSF PIRSF001365 3 297 1.4E-70 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 169 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 PANTHER PTHR12128:SF28 6 296 5.0E-83 T 22-04-2016 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 PANTHER PTHR12128 6 296 5.0E-83 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 SMART SM01130 6 296 7.7E-75 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02800 eddf49421f6fdc76278985fa0f5049bb 297 SUPERFAMILY SSF51569 3 296 1.05E-74 T 22-04-2016 HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 Gene3D G3DSA:1.20.1250.20 21 195 1.1E-28 T 22-04-2016 HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 Pfam PF07690 Major Facilitator Superfamily 25 423 2.0E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 381 400 1.3E-7 T 22-04-2016 HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 1.3E-7 T 22-04-2016 HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 1.3E-7 T 22-04-2016 HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 1.3E-7 T 22-04-2016 HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 PANTHER PTHR23501 12 484 1.0E-69 T 22-04-2016 HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 SUPERFAMILY SSF103473 263 477 2.53E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 SUPERFAMILY SSF103473 19 207 2.53E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02590 63d7b2f7a823adc2bc38e570aa8dfbd1 486 Gene3D G3DSA:1.20.1250.20 277 476 1.1E-12 T 22-04-2016 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 SUPERFAMILY SSF54368 8 102 4.32E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 232 247 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 Gene3D G3DSA:3.30.590.10 108 433 2.7E-118 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 442 3.1E-136 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 PANTHER PTHR20852 1 442 4.0E-161 T 22-04-2016 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 Gene3D G3DSA:3.10.20.70 6 107 1.9E-38 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 SUPERFAMILY SSF55931 106 442 1.67E-119 T 22-04-2016 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 98 1.4E-26 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 Pfam PF00120 Glutamine synthetase, catalytic domain 105 441 2.4E-125 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 PANTHER PTHR20852:SF7 1 442 4.0E-161 T 22-04-2016 HMPREF9228_RS02855 86177648fbb5ba148c7a368dd02287a7 445 SMART SM01230 104 355 7.5E-121 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 HMPREF9228_RS08285 d805d17b341b01bd264a4b962419303c 338 Gene3D G3DSA:3.40.50.720 134 305 5.4E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08285 d805d17b341b01bd264a4b962419303c 338 Gene3D G3DSA:3.40.50.720 31 133 1.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08285 d805d17b341b01bd264a4b962419303c 338 SUPERFAMILY SSF52283 33 155 1.57E-19 T 22-04-2016 HMPREF9228_RS08285 d805d17b341b01bd264a4b962419303c 338 PANTHER PTHR10996 19 329 1.7E-79 T 22-04-2016 HMPREF9228_RS08285 d805d17b341b01bd264a4b962419303c 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 335 8.1E-14 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 HMPREF9228_RS08285 d805d17b341b01bd264a4b962419303c 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 129 304 2.9E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 HMPREF9228_RS08285 d805d17b341b01bd264a4b962419303c 338 SUPERFAMILY SSF51735 123 305 1.62E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08510 3e45bf6edb1c78e45205b82e33588ea2 302 SUPERFAMILY SSF103481 39 139 1.23E-11 T 22-04-2016 HMPREF9228_RS08510 3e45bf6edb1c78e45205b82e33588ea2 302 PANTHER PTHR12715 5 286 3.2E-59 T 22-04-2016 HMPREF9228_RS08510 3e45bf6edb1c78e45205b82e33588ea2 302 SUPERFAMILY SSF103481 184 280 4.05E-17 T 22-04-2016 HMPREF9228_RS08510 3e45bf6edb1c78e45205b82e33588ea2 302 Pfam PF00892 EamA-like transporter family 144 278 3.5E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS08510 3e45bf6edb1c78e45205b82e33588ea2 302 Pfam PF00892 EamA-like transporter family 6 135 1.6E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 5 311 78.054 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 308 2.1E-53 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 6 309 1.1E-111 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PANTHER PTHR11405 6 309 2.9E-127 T 22-04-2016 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 SUPERFAMILY SSF53671 5 312 6.81E-97 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 2.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 263 272 2.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 275 298 2.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 Gene3D G3DSA:3.40.50.1370 142 297 6.9E-65 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 144 1.2E-41 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 5.7E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 5.7E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 5.7E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 5.7E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PRINTS PR00102 Ornithine carbamoyltransferase signature 289 300 5.7E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 PANTHER PTHR11405:SF1 6 309 2.9E-127 T 22-04-2016 HMPREF9228_RS05700 518cf23ac500d4e88f47f4ac43e8f808 321 Gene3D G3DSA:3.40.50.1370 4 141 1.8E-48 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS08135 03d9e87afbe74e9d6be380348c608358 190 Gene3D G3DSA:3.30.1440.10 12 188 6.7E-72 T 22-04-2016 IPR022803 Ribosomal protein L5 domain HMPREF9228_RS08135 03d9e87afbe74e9d6be380348c608358 190 PIRSF PIRSF002161 8 190 7.5E-60 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08135 03d9e87afbe74e9d6be380348c608358 190 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 11 189 41.31 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08135 03d9e87afbe74e9d6be380348c608358 190 Pfam PF00673 ribosomal L5P family C-terminus 95 187 7.1E-37 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal HMPREF9228_RS08135 03d9e87afbe74e9d6be380348c608358 190 Pfam PF00281 Ribosomal protein L5 34 90 2.9E-25 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal HMPREF9228_RS08135 03d9e87afbe74e9d6be380348c608358 190 SUPERFAMILY SSF55282 13 188 3.53E-71 T 22-04-2016 IPR022803 Ribosomal protein L5 domain HMPREF9228_RS08135 03d9e87afbe74e9d6be380348c608358 190 PANTHER PTHR11994 7 189 2.4E-86 T 22-04-2016 HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 PANTHER PTHR11921 51 123 2.3E-48 T 22-04-2016 HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 PANTHER PTHR11921 162 309 2.3E-48 T 22-04-2016 HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 54 306 5.6E-52 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 SUPERFAMILY SSF46548 182 308 1.05E-24 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 SUPERFAMILY SSF54292 52 122 1.18E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 Pfam PF13183 4Fe-4S dicluster domain 227 300 1.0E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 230 241 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 10 186 3.9E-43 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 Gene3D G3DSA:3.10.20.30 50 120 1.3E-30 T 22-04-2016 IPR012675 Beta-grasp domain HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 Gene3D G3DSA:3.10.20.30 161 180 1.3E-30 T 22-04-2016 IPR012675 Beta-grasp domain HMPREF9228_RS05060 96c3459aecf78b263320053dade94c49 316 Gene3D G3DSA:1.10.1060.10 183 312 3.4E-31 T 22-04-2016 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 93 117 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 SUPERFAMILY SSF55174 12 208 1.31E-50 T 22-04-2016 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 10 208 4.0E-66 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 29.981 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 Gene3D G3DSA:3.10.290.10 101 192 1.4E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 PANTHER PTHR11831:SF4 1 208 5.0E-56 T 22-04-2016 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 SMART SM00363 95 157 2.2E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 PANTHER PTHR11831 1 208 5.0E-56 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 SMART SM01390 5 94 4.3E-29 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 9 94 9.6E-17 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 Gene3D G3DSA:1.10.1050.10 9 100 1.1E-28 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 HMPREF9228_RS04700 d76588d4fcbe9deb448c9c8b7265d515 208 Pfam PF01479 S4 domain 96 142 1.4E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS07460 38b6314ebb276abc02f13d092fc00cdb 301 Gene3D G3DSA:3.10.129.10 136 299 2.2E-41 T 22-04-2016 IPR029069 HotDog domain HMPREF9228_RS07460 38b6314ebb276abc02f13d092fc00cdb 301 PANTHER PTHR11066:SF34 40 301 5.1E-72 T 22-04-2016 HMPREF9228_RS07460 38b6314ebb276abc02f13d092fc00cdb 301 SUPERFAMILY SSF54637 126 299 4.1E-37 T 22-04-2016 IPR029069 HotDog domain HMPREF9228_RS07460 38b6314ebb276abc02f13d092fc00cdb 301 Gene3D G3DSA:3.10.129.10 9 119 1.6E-35 T 22-04-2016 IPR029069 HotDog domain HMPREF9228_RS07460 38b6314ebb276abc02f13d092fc00cdb 301 Pfam PF13622 Thioesterase-like superfamily 40 296 5.8E-50 T 22-04-2016 HMPREF9228_RS07460 38b6314ebb276abc02f13d092fc00cdb 301 SUPERFAMILY SSF54637 28 121 1.58E-28 T 22-04-2016 IPR029069 HotDog domain HMPREF9228_RS07460 38b6314ebb276abc02f13d092fc00cdb 301 PANTHER PTHR11066 40 301 5.1E-72 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 SUPERFAMILY SSF51161 227 442 1.01E-40 T 22-04-2016 IPR011004 Trimeric LpxA-like HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 PANTHER PTHR22572 5 454 2.2E-175 T 22-04-2016 HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 457 37.404 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 PANTHER PTHR22572:SF115 5 454 2.2E-175 T 22-04-2016 HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 Gene3D G3DSA:3.90.550.10 5 256 1.8E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 Pfam PF12804 MobA-like NTP transferase domain 6 137 4.6E-21 T 22-04-2016 IPR025877 MobA-like NTP transferase HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 Gene3D G3DSA:2.160.10.10 262 442 2.0E-42 T 22-04-2016 HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 455 3.0E-156 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 SUPERFAMILY SSF53448 6 289 3.42E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 272 304 3.6E-4 T 22-04-2016 IPR001451 Hexapeptide repeat HMPREF9228_RS05200 df545eec45f85da1b10d9226da25a72f 460 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 400 434 1.4E-5 T 22-04-2016 IPR001451 Hexapeptide repeat HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.535 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 1.0E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 5.0E-17 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 Gene3D G3DSA:2.40.50.100 20 80 4.4E-30 T 22-04-2016 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 PANTHER PTHR15893 1 83 1.3E-45 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 SUPERFAMILY SSF110324 2 79 2.16E-32 T 22-04-2016 HMPREF9228_RS08750 5653e942336baa812847b0f3651f9904 83 Pfam PF01016 Ribosomal L27 protein 2 80 6.6E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01275 7f2817202557c1ee098e701eb69797d3 295 Pfam PF01168 Alanine racemase, N-terminal domain 47 292 1.1E-19 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 HMPREF9228_RS01275 7f2817202557c1ee098e701eb69797d3 295 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 135 292 2.1E-36 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 HMPREF9228_RS01275 7f2817202557c1ee098e701eb69797d3 295 SUPERFAMILY SSF51419 15 90 1.54E-13 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS01275 7f2817202557c1ee098e701eb69797d3 295 Gene3D G3DSA:3.20.20.10 2 292 1.7E-90 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS01275 7f2817202557c1ee098e701eb69797d3 295 PANTHER PTHR10146 133 292 6.3E-67 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 HMPREF9228_RS01275 7f2817202557c1ee098e701eb69797d3 295 PANTHER PTHR10146 6 91 6.3E-67 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 HMPREF9228_RS01275 7f2817202557c1ee098e701eb69797d3 295 SUPERFAMILY SSF51419 132 290 5.37E-45 T 22-04-2016 IPR029066 PLP-binding barrel HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 286 396 5.1E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 Gene3D G3DSA:3.30.565.10 247 397 9.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 PANTHER PTHR24423:SF394 55 396 8.7E-51 T 22-04-2016 HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 SMART SM00387 283 397 3.6E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 Gene3D G3DSA:3.30.450.20 55 165 7.8E-5 T 22-04-2016 HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 PANTHER PTHR24423 55 396 8.7E-51 T 22-04-2016 HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 SUPERFAMILY SSF47384 156 236 3.02E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 SUPERFAMILY SSF55874 227 395 4.45E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 6.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 350 6.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 336 6.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS07845 fd53d7ddff78feea7aeae1211e807197 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 394 6.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 PRINTS PR00315 GTP-binding elongation factor signature 505 516 2.4E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 PRINTS PR00315 GTP-binding elongation factor signature 489 499 2.4E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 PRINTS PR00315 GTP-binding elongation factor signature 541 550 2.4E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 PRINTS PR00315 GTP-binding elongation factor signature 437 450 2.4E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 939 16.614 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 PANTHER PTHR23115 418 763 3.5E-187 T 22-04-2016 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 PANTHER PTHR23115:SF184 418 763 3.5E-187 T 22-04-2016 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Pfam PF11987 Translation-initiation factor 2 725 830 8.0E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 SUPERFAMILY SSF52540 417 600 2.17E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 PANTHER PTHR23115 787 939 3.5E-187 T 22-04-2016 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Gene3D G3DSA:3.40.50.300 422 597 3.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Gene3D G3DSA:2.40.30.10 609 703 5.0E-22 T 22-04-2016 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 436 596 3.3E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 PANTHER PTHR23115:SF184 787 939 3.5E-187 T 22-04-2016 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 352 398 6.2E-9 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 5 51 1.6E-12 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 SUPERFAMILY SSF50447 841 939 1.94E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Gene3D G3DSA:2.40.30.10 842 940 4.3E-30 T 22-04-2016 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 SUPERFAMILY SSF52156 720 845 2.75E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 SUPERFAMILY SSF50447 611 693 5.5E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Pfam PF00009 Elongation factor Tu GTP binding domain 438 598 8.5E-33 T 22-04-2016 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 344 939 6.5E-227 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 HMPREF9228_RS08025 45839bfa37c7a8781e5655d76338fada 940 Gene3D G3DSA:3.40.50.10050 739 819 1.1E-23 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 Hamap MF_01393 ATP synthase subunit a [atpB]. 22 269 13.032 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 ProSitePatterns PS00449 ATP synthase a subunit signature. 189 198 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 36 263 1.4E-38 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.0E-16 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 PRINTS PR00123 ATP synthase A subunit signature 186 208 2.0E-16 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 PRINTS PR00123 ATP synthase A subunit signature 249 264 2.0E-16 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 Gene3D G3DSA:1.20.120.220 94 265 1.8E-37 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 PANTHER PTHR11410 38 266 3.6E-42 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 Pfam PF00119 ATP synthase A chain 44 262 1.4E-46 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS01560 2048fa6bcdf4f6c01e06a3e07c6006ba 269 SUPERFAMILY SSF81336 94 263 1.57E-36 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 Gene3D G3DSA:3.30.70.940 89 196 6.1E-37 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 91 273 7.7E-50 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 Pfam PF02357 Transcription termination factor nusG 90 192 1.1E-20 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 Gene3D G3DSA:2.30.30.30 213 274 3.6E-26 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 PANTHER PTHR30265 1 275 3.0E-52 T 22-04-2016 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 ProSitePatterns PS01014 Transcription termination factor nusG signature. 257 266 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 SMART SM00738 88 196 1.8E-33 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 SUPERFAMILY SSF50104 218 274 3.01E-15 T 22-04-2016 IPR008991 Translation protein SH3-like domain HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 PRINTS PR00338 Transcription termination factor NUSG signature 232 247 7.5E-15 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 PRINTS PR00338 Transcription termination factor NUSG signature 143 155 7.5E-15 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 PRINTS PR00338 Transcription termination factor NUSG signature 250 266 7.5E-15 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 SUPERFAMILY SSF82679 90 194 2.88E-33 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 HMPREF9228_RS08715 0ee0abe178e99e92a99513160fce85d5 275 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 88 274 21.347 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 HMPREF9228_RS06580 797bc76c5b4b5a9494cf0a5833ccc3ce 263 Pfam PF00005 ABC transporter 19 173 3.6E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS06580 797bc76c5b4b5a9494cf0a5833ccc3ce 263 PANTHER PTHR24220 4 248 4.8E-85 T 22-04-2016 HMPREF9228_RS06580 797bc76c5b4b5a9494cf0a5833ccc3ce 263 PANTHER PTHR24220:SF574 4 248 4.8E-85 T 22-04-2016 HMPREF9228_RS06580 797bc76c5b4b5a9494cf0a5833ccc3ce 263 SMART SM00382 27 225 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06580 797bc76c5b4b5a9494cf0a5833ccc3ce 263 Gene3D G3DSA:3.40.50.300 3 246 6.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06580 797bc76c5b4b5a9494cf0a5833ccc3ce 263 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS06580 797bc76c5b4b5a9494cf0a5833ccc3ce 263 SUPERFAMILY SSF52540 15 242 3.82E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 PANTHER PTHR10210:SF41 2 329 1.7E-149 T 22-04-2016 HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 13 129 6.6E-40 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 Gene3D G3DSA:3.40.50.2020 168 294 5.0E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 Gene3D G3DSA:3.40.50.2020 10 167 3.7E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 PANTHER PTHR10210 2 329 1.7E-149 T 22-04-2016 HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 SUPERFAMILY SSF53271 78 314 3.09E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 SMART SM01400 13 129 1.3E-63 T 22-04-2016 HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 Pfam PF14572 Phosphoribosyl synthetase-associated domain 217 322 1.7E-16 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 HMPREF9228_RS01280 3832aa77587adc0c65a865b331e91f1d 337 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 14 323 1.2E-105 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 Gene3D G3DSA:1.10.260.40 12 62 4.7E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 SUPERFAMILY SSF53822 66 343 1.35E-42 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 Gene3D G3DSA:3.40.50.2300 202 338 1.2E-35 T 22-04-2016 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 SMART SM00354 10 80 9.6E-30 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 SUPERFAMILY SSF47413 9 68 9.78E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 Gene3D G3DSA:3.40.50.2300 63 201 5.7E-14 T 22-04-2016 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 Pfam PF13377 Periplasmic binding protein-like domain 199 342 7.5E-29 T 22-04-2016 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 PANTHER PTHR30146 10 371 1.2E-70 T 22-04-2016 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 57 6.1E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02060 7e33cd7f7449de5dc16de4b987757f2a 371 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06685 b4c0b8ac664365b8b529c214bce53c26 398 PANTHER PTHR24220 5 222 5.5E-113 T 22-04-2016 HMPREF9228_RS06685 b4c0b8ac664365b8b529c214bce53c26 398 PANTHER PTHR24220:SF470 5 222 5.5E-113 T 22-04-2016 HMPREF9228_RS06685 b4c0b8ac664365b8b529c214bce53c26 398 SUPERFAMILY SSF52540 3 224 8.49E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06685 b4c0b8ac664365b8b529c214bce53c26 398 SMART SM00382 30 217 8.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06685 b4c0b8ac664365b8b529c214bce53c26 398 Pfam PF00005 ABC transporter 21 168 3.7E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS06685 b4c0b8ac664365b8b529c214bce53c26 398 Gene3D G3DSA:3.40.50.300 2 224 8.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06685 b4c0b8ac664365b8b529c214bce53c26 398 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 3 216 3.9E-82 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 HMPREF9228_RS06685 b4c0b8ac664365b8b529c214bce53c26 398 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS00740 8327562c9d29aab9bf8b978e2efdc717 254 SUPERFAMILY SSF53633 4 243 2.09E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS00740 8327562c9d29aab9bf8b978e2efdc717 254 Gene3D G3DSA:3.40.1160.10 3 243 2.0E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS00740 8327562c9d29aab9bf8b978e2efdc717 254 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 2 245 3.1E-88 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 HMPREF9228_RS00740 8327562c9d29aab9bf8b978e2efdc717 254 PANTHER PTHR21499 3 241 1.2E-108 T 22-04-2016 HMPREF9228_RS00740 8327562c9d29aab9bf8b978e2efdc717 254 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 HMPREF9228_RS00740 8327562c9d29aab9bf8b978e2efdc717 254 PANTHER PTHR21499:SF27 3 241 1.2E-108 T 22-04-2016 HMPREF9228_RS00740 8327562c9d29aab9bf8b978e2efdc717 254 Pfam PF00696 Amino acid kinase family 3 230 3.0E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 Gene3D G3DSA:1.10.274.10 37 135 8.6E-20 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 PANTHER PTHR22931 71 537 6.7E-133 T 22-04-2016 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 128 6.3E-18 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 434 452 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 249 526 1.6E-79 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 Gene3D G3DSA:3.50.30.10 136 251 1.9E-33 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 PANTHER PTHR22931:SF28 71 537 6.7E-133 T 22-04-2016 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 3 542 6.2E-125 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 487 499 7.15E-18 T 22-04-2016 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 434 449 7.15E-18 T 22-04-2016 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 7.15E-18 T 22-04-2016 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 290 309 7.15E-18 T 22-04-2016 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 SUPERFAMILY SSF47831 39 145 2.48E-17 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 SUPERFAMILY SSF52009 127 242 3.01E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 PIRSF PIRSF000732 1 546 1.3E-155 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 Gene3D G3DSA:3.20.20.60 252 541 1.1E-89 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 Pfam PF00391 PEP-utilising enzyme, mobile domain 157 226 3.1E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 HMPREF9228_RS00935 a65214ee72f57e44c92f82c94e8d8c51 549 SUPERFAMILY SSF51621 250 530 3.14E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 HMPREF9228_RS05735 fb0922d6a8acf0770e2890a343ee5e6e 355 Pfam PF01409 tRNA synthetases class II core domain (F) 100 351 1.5E-91 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 HMPREF9228_RS05735 fb0922d6a8acf0770e2890a343ee5e6e 355 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 47 351 1.0E-86 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 HMPREF9228_RS05735 fb0922d6a8acf0770e2890a343ee5e6e 355 SUPERFAMILY SSF46589 21 106 6.28E-14 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 HMPREF9228_RS05735 fb0922d6a8acf0770e2890a343ee5e6e 355 SUPERFAMILY SSF55681 100 351 1.04E-71 T 22-04-2016 HMPREF9228_RS05735 fb0922d6a8acf0770e2890a343ee5e6e 355 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 27 95 1.3E-14 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 HMPREF9228_RS05735 fb0922d6a8acf0770e2890a343ee5e6e 355 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 16 351 41.811 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 HMPREF9228_RS05735 fb0922d6a8acf0770e2890a343ee5e6e 355 PANTHER PTHR11538 100 355 1.4E-87 T 22-04-2016 HMPREF9228_RS05735 fb0922d6a8acf0770e2890a343ee5e6e 355 Gene3D G3DSA:3.30.930.10 19 351 1.0E-112 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SUPERFAMILY SSF90123 3 47 3.53E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SUPERFAMILY SSF52540 444 678 1.72E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Gene3D G3DSA:1.20.1560.10 338 388 5.2E-44 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Gene3D G3DSA:1.20.1560.10 3 296 5.2E-44 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Gene3D G3DSA:1.20.1560.10 765 1079 7.4E-36 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 PANTHER PTHR24222 809 1194 2.3E-140 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 PANTHER PTHR24222 1237 1351 2.3E-140 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 PANTHER PTHR24222 6 17 2.3E-140 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 PANTHER PTHR24222:SF26 809 1194 2.3E-140 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 PANTHER PTHR24222:SF26 1237 1351 2.3E-140 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 PANTHER PTHR24222:SF26 6 17 2.3E-140 T 22-04-2016 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Pfam PF00005 ABC transporter 449 606 4.3E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Pfam PF00005 ABC transporter 1111 1302 5.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 ProSitePatterns PS00211 ABC transporters family signature. 578 592 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SMART SM00382 458 654 1.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SMART SM00382 1120 1348 2.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Pfam PF00664 ABC transporter transmembrane region 83 286 4.3E-22 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Pfam PF00664 ABC transporter transmembrane region 792 1049 2.3E-16 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SUPERFAMILY SSF90123 765 1079 4.19E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SUPERFAMILY SSF52540 1095 1186 3.28E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SUPERFAMILY SSF52540 1243 1351 3.28E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SUPERFAMILY SSF90123 81 298 3.53E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 SUPERFAMILY SSF90123 339 388 3.53E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Gene3D G3DSA:3.40.50.300 443 672 5.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Gene3D G3DSA:3.40.50.300 1252 1351 1.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02080 144b123e105887d88f4a11dd77c8d545 1353 Gene3D G3DSA:3.40.50.300 1096 1210 1.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05065 488f36e060121f4583b4dae2a6451b64 221 Gene3D G3DSA:3.40.50.150 13 221 3.5E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS05065 488f36e060121f4583b4dae2a6451b64 221 Pfam PF01596 O-methyltransferase 36 220 1.2E-13 T 22-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 HMPREF9228_RS05065 488f36e060121f4583b4dae2a6451b64 221 PANTHER PTHR10509 46 221 9.8E-16 T 22-04-2016 HMPREF9228_RS05065 488f36e060121f4583b4dae2a6451b64 221 PANTHER PTHR10509:SF18 46 221 9.8E-16 T 22-04-2016 HMPREF9228_RS05065 488f36e060121f4583b4dae2a6451b64 221 SUPERFAMILY SSF53335 27 221 7.18E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS09760 e553c817b9f5ee695ad7ae1d851a4460 335 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 49 267 1.8E-53 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal HMPREF9228_RS09760 e553c817b9f5ee695ad7ae1d851a4460 335 PANTHER PTHR12428:SF14 5 262 1.8E-44 T 22-04-2016 HMPREF9228_RS09760 e553c817b9f5ee695ad7ae1d851a4460 335 PANTHER PTHR12428 5 262 1.8E-44 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 HMPREF9228_RS09760 e553c817b9f5ee695ad7ae1d851a4460 335 Pfam PF02096 60Kd inner membrane protein 50 267 4.3E-48 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 HMPREF9228_RS03810 cd9e70f9c02bd1eb2a2b9ba4ab9ffefc 97 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 94 2.5E-14 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family HMPREF9228_RS03810 cd9e70f9c02bd1eb2a2b9ba4ab9ffefc 97 PIRSF PIRSF006156 1 97 3.1E-18 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin HMPREF9228_RS03810 cd9e70f9c02bd1eb2a2b9ba4ab9ffefc 97 SUPERFAMILY SSF143011 1 94 1.65E-16 T 22-04-2016 HMPREF9228_RS03810 cd9e70f9c02bd1eb2a2b9ba4ab9ffefc 97 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 95 1.6E-23 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 Gene3D G3DSA:1.10.8.10 3 55 7.8E-21 T 22-04-2016 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 Gene3D G3DSA:3.30.479.20 57 152 5.0E-12 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 PANTHER PTHR11741 1 283 1.4E-75 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 Pfam PF00889 Elongation factor TS 76 279 5.5E-55 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 SUPERFAMILY SSF54713 57 96 1.47E-37 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 SUPERFAMILY SSF54713 182 278 1.47E-37 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 SUPERFAMILY SSF46934 4 55 1.53E-13 T 22-04-2016 IPR009060 UBA-like GO:0005515 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 2.7E-63 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 Gene3D G3DSA:3.30.479.20 153 194 1.6E-15 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 Gene3D G3DSA:3.30.479.20 243 278 1.6E-15 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 283 57.534 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 Gene3D G3DSA:1.10.286.20 199 242 7.4E-21 T 22-04-2016 HMPREF9228_RS03730 cf9a9e5de385fb88841caa2281c1476b 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 79 89 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 HMPREF9228_RS05775 51187d79aec8388d7fdc1a8014173234 260 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 1 246 2.0E-121 T 22-04-2016 HMPREF9228_RS05775 51187d79aec8388d7fdc1a8014173234 260 Pfam PF13829 Domain of unknown function (DUF4191) 7 254 2.1E-73 T 22-04-2016 IPR025445 Protein of unknown function DUF4191 HMPREF9228_RS06995 e1b81388ad00140c5a9f11bdc35f1fc2 283 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 7 262 1.9E-93 T 22-04-2016 IPR013418 CRISPR-associated protein Csd2 HMPREF9228_RS06995 e1b81388ad00140c5a9f11bdc35f1fc2 283 Pfam PF05107 CRISPR-associated protein Cas7 7 262 2.7E-72 T 22-04-2016 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C HMPREF9228_RS06995 e1b81388ad00140c5a9f11bdc35f1fc2 283 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 4 257 1.4E-68 T 22-04-2016 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 Gene3D G3DSA:1.10.10.10 174 230 8.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 PANTHER PTHR26402:SF137 13 227 6.9E-29 T 22-04-2016 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 SUPERFAMILY SSF46894 164 230 4.76E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 185 1.3E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 201 1.3E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 213 1.3E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 Gene3D G3DSA:3.40.50.2300 13 173 1.4E-16 T 22-04-2016 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 ProSitePatterns PS00622 LuxR-type HTH domain signature. 185 212 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 SMART SM00448 13 129 6.0E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 SMART SM00421 168 225 1.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 Pfam PF00072 Response regulator receiver domain 17 129 7.0E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 SUPERFAMILY SSF52172 12 135 4.41E-15 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 Pfam PF00196 Bacterial regulatory proteins, luxR family 170 222 8.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03840 f37401233c3070f3e7c6e19471fbc556 231 PANTHER PTHR26402 13 227 6.9E-29 T 22-04-2016 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 SMART SM00354 9 79 1.2E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 Gene3D G3DSA:1.10.260.40 9 58 7.1E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 SUPERFAMILY SSF53822 74 319 1.91E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 Pfam PF13377 Periplasmic binding protein-like domain 178 338 1.8E-29 T 22-04-2016 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 Gene3D G3DSA:3.40.50.2300 180 336 4.1E-38 T 22-04-2016 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 SUPERFAMILY SSF47413 10 64 5.18E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 PANTHER PTHR30146 9 338 2.1E-72 T 22-04-2016 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 5.8E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS04470 053c50b31f59790dd8d49d24a3940cff 342 Gene3D G3DSA:3.40.50.2300 59 179 8.4E-15 T 22-04-2016 HMPREF9228_RS05890 99f1c4c2e17d69de80449cfb547e3608 294 PANTHER PTHR30007 16 264 2.1E-44 T 22-04-2016 HMPREF9228_RS05890 99f1c4c2e17d69de80449cfb547e3608 294 PANTHER PTHR30007:SF4 16 264 2.1E-44 T 22-04-2016 HMPREF9228_RS05890 99f1c4c2e17d69de80449cfb547e3608 294 SUPERFAMILY SSF89550 15 93 3.01E-41 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 HMPREF9228_RS05890 99f1c4c2e17d69de80449cfb547e3608 294 SUPERFAMILY SSF89550 177 275 3.01E-41 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 HMPREF9228_RS05890 99f1c4c2e17d69de80449cfb547e3608 294 SMART SM00481 15 80 7.1E-10 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 HMPREF9228_RS05890 99f1c4c2e17d69de80449cfb547e3608 294 Gene3D G3DSA:3.20.20.140 16 98 6.3E-35 T 22-04-2016 HMPREF9228_RS05890 99f1c4c2e17d69de80449cfb547e3608 294 Gene3D G3DSA:3.20.20.140 169 269 6.3E-35 T 22-04-2016 HMPREF9228_RS05890 99f1c4c2e17d69de80449cfb547e3608 294 Pfam PF02811 PHP domain 16 144 5.5E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 HMPREF9228_RS09345 9f652c7968f08c7dbd816f2fd731df5a 284 SUPERFAMILY SSF161098 10 280 5.14E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09345 9f652c7968f08c7dbd816f2fd731df5a 284 Gene3D G3DSA:1.10.3720.10 9 275 2.4E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09345 9f652c7968f08c7dbd816f2fd731df5a 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 270 1.7E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09345 9f652c7968f08c7dbd816f2fd731df5a 284 PANTHER PTHR32243 4 281 1.6E-57 T 22-04-2016 HMPREF9228_RS09345 9f652c7968f08c7dbd816f2fd731df5a 284 PANTHER PTHR32243:SF40 4 281 1.6E-57 T 22-04-2016 HMPREF9228_RS09770 7f01ba12d8ddc231d033b9d3ab58e203 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09770 7f01ba12d8ddc231d033b9d3ab58e203 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.8E-20 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09770 7f01ba12d8ddc231d033b9d3ab58e203 44 Pfam PF00468 Ribosomal protein L34 1 44 2.7E-20 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09770 7f01ba12d8ddc231d033b9d3ab58e203 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 5.0E-15 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09770 7f01ba12d8ddc231d033b9d3ab58e203 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.263 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09770 7f01ba12d8ddc231d033b9d3ab58e203 44 PANTHER PTHR14503 1 44 5.2E-15 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 PANTHER PTHR11938 1 92 3.3E-28 T 22-04-2016 HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 Gene3D G3DSA:3.30.70.20 3 66 2.7E-18 T 22-04-2016 HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 PANTHER PTHR11938:SF82 1 92 3.3E-28 T 22-04-2016 HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 SUPERFAMILY SSF54862 2 62 2.79E-20 T 22-04-2016 HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 Pfam PF00037 4Fe-4S binding domain 34 55 9.8E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.6E-16 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.6E-16 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 HMPREF9228_RS08345 3fe78fa99bd21f3163d7ebd597261ab7 106 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.6E-16 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 351 605 6.8E-36 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 21 277 1.2E-17 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 PANTHER PTHR32329 19 612 0.0 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 PANTHER PTHR32329 1267 1686 0.0 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 PANTHER PTHR32329 665 974 0.0 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 PANTHER PTHR32329 1008 1108 0.0 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 SUPERFAMILY SSF53067 350 605 2.79E-46 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 351 603 9.2E-39 T 22-04-2016 IPR008275 CoA enzyme activase HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 PANTHER PTHR32329:SF4 19 612 0.0 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 PANTHER PTHR32329:SF4 1267 1686 0.0 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 PANTHER PTHR32329:SF4 665 974 0.0 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 PANTHER PTHR32329:SF4 1008 1108 0.0 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 SUPERFAMILY SSF53067 20 279 2.73E-42 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 753 971 2.2E-74 T 22-04-2016 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 Gene3D G3DSA:3.30.420.40 120 258 3.8E-42 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 Gene3D G3DSA:3.30.420.40 446 587 3.3E-48 T 22-04-2016 HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 1019 1117 9.4E-18 T 22-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit HMPREF9228_RS07205 199d94e9db6f4025cf248cf1d52f2635 1704 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 1220 1504 4.1E-28 T 22-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 SUPERFAMILY SSF52313 6 229 2.22E-87 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 232 40.646 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 Gene3D G3DSA:3.40.50.10490 23 99 2.0E-63 T 22-04-2016 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 Gene3D G3DSA:3.40.50.10490 159 242 2.0E-63 T 22-04-2016 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 Gene3D G3DSA:1.10.287.610 100 153 1.3E-19 T 22-04-2016 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 Pfam PF00318 Ribosomal protein S2 9 225 7.2E-92 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 225 1.9E-99 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS03725 f762eb8ef9082abb580e028205a337cc 279 PANTHER PTHR12534 1 271 3.9E-105 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS01205 7bf1cd16c997e5fee01c407daff6ab64 344 PANTHER PTHR22916 1 300 9.8E-37 T 22-04-2016 HMPREF9228_RS01205 7bf1cd16c997e5fee01c407daff6ab64 344 Pfam PF00535 Glycosyl transferase family 2 10 116 2.1E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS01205 7bf1cd16c997e5fee01c407daff6ab64 344 Gene3D G3DSA:3.90.550.10 6 212 6.0E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS01205 7bf1cd16c997e5fee01c407daff6ab64 344 PANTHER PTHR22916:SF24 1 300 9.8E-37 T 22-04-2016 HMPREF9228_RS01205 7bf1cd16c997e5fee01c407daff6ab64 344 SUPERFAMILY SSF53448 8 237 1.07E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS08445 50e81f5f89a4ed499beb2e0cbf185e94 259 PANTHER PTHR24220 6 257 8.8E-113 T 22-04-2016 HMPREF9228_RS08445 50e81f5f89a4ed499beb2e0cbf185e94 259 SMART SM00382 29 230 2.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS08445 50e81f5f89a4ed499beb2e0cbf185e94 259 Pfam PF00005 ABC transporter 21 177 8.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS08445 50e81f5f89a4ed499beb2e0cbf185e94 259 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS08445 50e81f5f89a4ed499beb2e0cbf185e94 259 Gene3D G3DSA:3.40.50.300 4 249 2.0E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08445 50e81f5f89a4ed499beb2e0cbf185e94 259 SUPERFAMILY SSF52540 5 245 8.75E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08445 50e81f5f89a4ed499beb2e0cbf185e94 259 PANTHER PTHR24220:SF585 6 257 8.8E-113 T 22-04-2016 HMPREF9228_RS08445 50e81f5f89a4ed499beb2e0cbf185e94 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 259 1.1E-106 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 PANTHER PTHR11070 451 748 5.1E-105 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 PANTHER PTHR11070 79 344 5.1E-105 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 Gene3D G3DSA:3.40.50.300 587 756 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 SUPERFAMILY SSF52540 498 753 2.72E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 SUPERFAMILY SSF52540 177 256 2.72E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 SUPERFAMILY SSF52540 336 442 2.72E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 Gene3D G3DSA:3.40.50.300 499 586 1.8E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 Gene3D G3DSA:3.40.50.300 178 286 1.8E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 Pfam PF13245 Part of AAA domain 192 267 2.0E-16 T 22-04-2016 HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 PANTHER PTHR11070:SF25 451 748 5.1E-105 T 22-04-2016 HMPREF9228_RS02910 d4294799c1a460e80250f27c08c9ce48 759 PANTHER PTHR11070:SF25 79 344 5.1E-105 T 22-04-2016 HMPREF9228_RS05880 87028c5e47fe257549f82b7d8b3d4b0c 543 SUPERFAMILY SSF56112 141 301 1.35E-14 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS05880 87028c5e47fe257549f82b7d8b3d4b0c 543 Pfam PF01636 Phosphotransferase enzyme family 153 279 9.5E-7 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase HMPREF9228_RS05880 87028c5e47fe257549f82b7d8b3d4b0c 543 Gene3D G3DSA:3.90.1200.10 152 280 2.2E-10 T 22-04-2016 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 ProSitePatterns PS00321 recA signature. 231 239 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 PRINTS PR00142 RecA protein signature 228 256 5.0E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 PRINTS PR00142 RecA protein signature 315 332 5.0E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 PRINTS PR00142 RecA protein signature 145 174 5.0E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 PRINTS PR00142 RecA protein signature 183 212 5.0E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 PRINTS PR00142 RecA protein signature 111 140 5.0E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 PRINTS PR00142 RecA protein signature 261 290 5.0E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 Gene3D G3DSA:3.30.250.10 286 343 4.0E-26 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 Hamap MF_00268 Protein RecA [recA]. 23 347 52.483 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 Pfam PF00154 recA bacterial DNA recombination protein 26 286 1.8E-143 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 PANTHER PTHR22942 14 353 2.3E-197 T 22-04-2016 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 Gene3D G3DSA:3.40.50.300 45 285 3.9E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 23 341 2.4E-173 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 SUPERFAMILY SSF54752 286 343 1.96E-19 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 PANTHER PTHR22942:SF1 14 353 2.3E-197 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 SMART SM00382 75 246 5.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03350 ccd18952ccfc28ab6f7d149a4f4c6874 394 SUPERFAMILY SSF52540 23 285 3.04E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 7.1E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 Gene3D G3DSA:3.40.50.2300 175 309 1.2E-28 T 22-04-2016 HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 SMART SM00354 3 73 1.9E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 Pfam PF13377 Periplasmic binding protein-like domain 172 331 2.4E-23 T 22-04-2016 HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 SUPERFAMILY SSF47413 3 61 7.11E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 PANTHER PTHR30146 4 309 2.4E-76 T 22-04-2016 HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 SUPERFAMILY SSF53822 61 313 1.46E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 Gene3D G3DSA:3.40.50.2300 56 174 9.4E-40 T 22-04-2016 HMPREF9228_RS07050 d502041b935317410327e7038ea7895d 339 Gene3D G3DSA:1.10.260.40 4 55 4.6E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 41 304 8.0E-42 T 22-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 SUPERFAMILY SSF51445 351 693 6.93E-96 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PANTHER PTHR22762:SF81 353 593 3.6E-56 T 22-04-2016 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 ProSitePatterns PS00512 Alpha-galactosidase signature. 381 397 - T 22-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PRINTS PR00743 Glycosyl hydrolase family 36 signature 261 276 1.7E-41 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PRINTS PR00743 Glycosyl hydrolase family 36 signature 433 455 1.7E-41 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PRINTS PR00743 Glycosyl hydrolase family 36 signature 352 366 1.7E-41 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PRINTS PR00743 Glycosyl hydrolase family 36 signature 380 395 1.7E-41 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PRINTS PR00743 Glycosyl hydrolase family 36 signature 492 507 1.7E-41 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PRINTS PR00743 Glycosyl hydrolase family 36 signature 567 583 1.7E-41 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PRINTS PR00743 Glycosyl hydrolase family 36 signature 542 558 1.7E-41 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 Pfam PF02065 Melibiase 314 655 2.8E-144 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 Gene3D G3DSA:3.20.20.70 351 641 1.4E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 PANTHER PTHR22762 353 593 3.6E-56 T 22-04-2016 HMPREF9228_RS09455 898fbc4d22de268259a01f3917c4348e 771 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 674 763 9.1E-7 T 22-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 22-04-2016 HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 261 2.4E-53 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 261 1.9E-56 T 22-04-2016 IPR000150 Cof protein GO:0016787 HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 234 1.6E-28 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 SUPERFAMILY SSF56784 3 264 1.47E-64 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 PANTHER PTHR10000:SF25 5 267 9.5E-54 T 22-04-2016 HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 PANTHER PTHR10000 5 267 9.5E-54 T 22-04-2016 HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 Gene3D G3DSA:3.40.50.1000 3 78 7.9E-53 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05175 f9bd6cc25062ea23ccae31bf3f318236 269 Gene3D G3DSA:3.40.50.1000 170 265 7.9E-53 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS01415 c567c839ebac8e1bcf7a820956a03dff 513 SUPERFAMILY SSF75304 5 491 4.19E-151 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 HMPREF9228_RS01415 c567c839ebac8e1bcf7a820956a03dff 513 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 18 491 1.0E-182 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 HMPREF9228_RS01415 c567c839ebac8e1bcf7a820956a03dff 513 Pfam PF01425 Amidase 29 478 1.3E-149 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 HMPREF9228_RS01415 c567c839ebac8e1bcf7a820956a03dff 513 PANTHER PTHR11895:SF7 7 498 5.8E-202 T 22-04-2016 HMPREF9228_RS01415 c567c839ebac8e1bcf7a820956a03dff 513 ProSitePatterns PS00571 Amidases signature. 158 189 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 HMPREF9228_RS01415 c567c839ebac8e1bcf7a820956a03dff 513 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 16 492 85.581 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 HMPREF9228_RS01415 c567c839ebac8e1bcf7a820956a03dff 513 Gene3D G3DSA:3.90.1300.10 5 494 3.3E-166 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 HMPREF9228_RS01415 c567c839ebac8e1bcf7a820956a03dff 513 PANTHER PTHR11895 7 498 5.8E-202 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 HMPREF9228_RS02280 b0d8b6e27ffdb59b09598bddf60f51ee 94 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 12 84 14.429 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS02280 b0d8b6e27ffdb59b09598bddf60f51ee 94 SUPERFAMILY SSF63562 12 84 1.18E-22 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS02280 b0d8b6e27ffdb59b09598bddf60f51ee 94 SMART SM01409 19 83 1.3E-12 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS02280 b0d8b6e27ffdb59b09598bddf60f51ee 94 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 13 82 4.1E-21 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS02280 b0d8b6e27ffdb59b09598bddf60f51ee 94 Gene3D G3DSA:3.90.940.10 13 89 3.3E-31 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS02280 b0d8b6e27ffdb59b09598bddf60f51ee 94 PANTHER PTHR34476 13 89 3.4E-21 T 22-04-2016 HMPREF9228_RS02280 b0d8b6e27ffdb59b09598bddf60f51ee 94 Pfam PF01192 RNA polymerase Rpb6 19 81 5.1E-14 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 Pfam PF02910 Fumarate reductase flavoprotein C-term 499 620 2.0E-26 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 Gene3D G3DSA:4.10.80.40 593 620 5.5E-5 T 22-04-2016 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 Gene3D G3DSA:3.50.50.60 370 443 2.1E-110 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 Gene3D G3DSA:3.50.50.60 7 256 2.1E-110 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 SUPERFAMILY SSF56425 250 375 7.18E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 Gene3D G3DSA:3.90.700.10 257 368 3.8E-35 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 Pfam PF00890 FAD binding domain 11 423 5.6E-101 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 PIRSF PIRSF000171 1 613 3.7E-40 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 PANTHER PTHR11632 10 620 2.5E-227 T 22-04-2016 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 PANTHER PTHR11632:SF5 10 620 2.5E-227 T 22-04-2016 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 SUPERFAMILY SSF46977 489 620 4.45E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 SUPERFAMILY SSF51905 378 450 1.83E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 SUPERFAMILY SSF51905 9 267 1.83E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 56 65 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 11 620 5.6E-191 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 HMPREF9228_RS05055 2780676b103a27fa01cd0c9e21b98db6 620 Gene3D G3DSA:1.20.58.100 489 592 1.5E-23 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 HMPREF9228_RS05335 b23d0902ca2435d1800e5f1ce80ee251 204 SUPERFAMILY SSF52540 1 198 1.94E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05335 b23d0902ca2435d1800e5f1ce80ee251 204 Gene3D G3DSA:3.40.50.300 1 199 1.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05335 b23d0902ca2435d1800e5f1ce80ee251 204 PANTHER PTHR10695 3 194 2.3E-45 T 22-04-2016 HMPREF9228_RS05335 b23d0902ca2435d1800e5f1ce80ee251 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 190 1.8E-34 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 HMPREF9228_RS05335 b23d0902ca2435d1800e5f1ce80ee251 204 Pfam PF01121 Dephospho-CoA kinase 2 179 5.6E-44 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 HMPREF9228_RS05335 b23d0902ca2435d1800e5f1ce80ee251 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 200 21.871 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 HMPREF9228_RS04860 f2172d6664a0f2663aeccfab21da8886 455 Gene3D G3DSA:1.20.1250.20 29 219 1.2E-13 T 22-04-2016 HMPREF9228_RS04860 f2172d6664a0f2663aeccfab21da8886 455 PANTHER PTHR23513:SF5 11 440 2.5E-63 T 22-04-2016 HMPREF9228_RS04860 f2172d6664a0f2663aeccfab21da8886 455 Pfam PF07690 Major Facilitator Superfamily 34 410 3.3E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS04860 f2172d6664a0f2663aeccfab21da8886 455 PANTHER PTHR23513 11 440 2.5E-63 T 22-04-2016 HMPREF9228_RS04860 f2172d6664a0f2663aeccfab21da8886 455 SUPERFAMILY SSF103473 27 449 5.49E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS04860 f2172d6664a0f2663aeccfab21da8886 455 Gene3D G3DSA:1.20.1250.20 292 441 4.7E-11 T 22-04-2016 HMPREF9228_RS05575 810846ff00a758eb762cadb753ac3e34 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 182 4.9E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS05575 810846ff00a758eb762cadb753ac3e34 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 5.5E-24 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05575 810846ff00a758eb762cadb753ac3e34 215 PANTHER PTHR18901:SF44 3 208 1.1E-56 T 22-04-2016 HMPREF9228_RS05575 810846ff00a758eb762cadb753ac3e34 215 SUPERFAMILY SSF56784 1 212 1.71E-41 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05575 810846ff00a758eb762cadb753ac3e34 215 PANTHER PTHR18901 3 208 1.1E-56 T 22-04-2016 HMPREF9228_RS05575 810846ff00a758eb762cadb753ac3e34 215 Gene3D G3DSA:3.40.50.1000 88 211 1.5E-35 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05575 810846ff00a758eb762cadb753ac3e34 215 Gene3D G3DSA:3.40.50.1000 1 16 1.5E-35 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00990 974ffd854cc6fd4329248314476bab02 442 PANTHER PTHR34980 136 299 1.7E-14 T 22-04-2016 HMPREF9228_RS00990 974ffd854cc6fd4329248314476bab02 442 Pfam PF05656 Protein of unknown function (DUF805) 147 298 2.1E-24 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 SUPERFAMILY SSF54980 331 417 2.59E-9 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 Gene3D G3DSA:2.40.50.250 512 606 4.1E-34 T 22-04-2016 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 PANTHER PTHR23115 1 622 3.6E-232 T 22-04-2016 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 PRINTS PR00315 GTP-binding elongation factor signature 100 111 3.1E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.1E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.1E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.1E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.1E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 Gene3D G3DSA:2.40.30.10 235 330 2.8E-26 T 22-04-2016 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 Pfam PF00679 Elongation factor G C-terminus 427 509 5.9E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 SUPERFAMILY SSF54980 428 542 1.12E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 Gene3D G3DSA:3.30.70.240 432 509 1.2E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 623 2.2E-258 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 Pfam PF03144 Elongation factor Tu domain 2 247 316 1.9E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 SUPERFAMILY SSF50447 208 329 5.71E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 SMART SM00838 425 513 8.5E-5 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 155 4.3E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 SUPERFAMILY SSF52540 4 233 3.39E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 PANTHER PTHR23115:SF14 1 622 3.6E-232 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 Gene3D G3DSA:3.40.50.300 6 234 2.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 Pfam PF00009 Elongation factor Tu GTP binding domain 6 223 1.9E-51 T 22-04-2016 HMPREF9228_RS03190 307fa2638165a154ccdb40d80c42ca6f 643 Gene3D G3DSA:3.30.70.870 331 431 5.9E-32 T 22-04-2016 HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 Gene3D G3DSA:3.40.50.2300 5 132 2.1E-39 T 22-04-2016 HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 SMART SM00862 164 235 7.9E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 PANTHER PTHR26402:SF292 13 237 3.0E-90 T 22-04-2016 HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 Pfam PF00072 Response regulator receiver domain 15 122 1.7E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 Gene3D G3DSA:1.10.10.10 141 238 1.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 235 2.1E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 PANTHER PTHR26402 13 237 3.0E-90 T 22-04-2016 HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 SMART SM00448 13 123 2.6E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 SUPERFAMILY SSF52172 9 132 1.57E-40 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS05380 8d4e168b767f45632b4e025587b7e83d 240 SUPERFAMILY SSF46894 140 237 1.38E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS03825 f67d73e372c5932b9da1ce9c043c344e 226 Gene3D G3DSA:3.40.50.300 3 225 1.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03825 f67d73e372c5932b9da1ce9c043c344e 226 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS03825 f67d73e372c5932b9da1ce9c043c344e 226 SUPERFAMILY SSF52540 8 225 3.47E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03825 f67d73e372c5932b9da1ce9c043c344e 226 SMART SM00382 34 224 2.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03825 f67d73e372c5932b9da1ce9c043c344e 226 PANTHER PTHR24220:SF509 6 225 1.1E-71 T 22-04-2016 HMPREF9228_RS03825 f67d73e372c5932b9da1ce9c043c344e 226 Pfam PF00005 ABC transporter 26 175 3.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS03825 f67d73e372c5932b9da1ce9c043c344e 226 PANTHER PTHR24220 6 225 1.1E-71 T 22-04-2016 HMPREF9228_RS00855 e23b8b39c4021e424c559fc98c94adca 274 Gene3D G3DSA:3.40.50.300 4 263 6.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00855 e23b8b39c4021e424c559fc98c94adca 274 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS00855 e23b8b39c4021e424c559fc98c94adca 274 PANTHER PTHR24220 11 263 2.8E-99 T 22-04-2016 HMPREF9228_RS00855 e23b8b39c4021e424c559fc98c94adca 274 PANTHER PTHR24220:SF336 11 263 2.8E-99 T 22-04-2016 HMPREF9228_RS00855 e23b8b39c4021e424c559fc98c94adca 274 Pfam PF00005 ABC transporter 36 187 1.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS00855 e23b8b39c4021e424c559fc98c94adca 274 SMART SM00382 44 236 2.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS00855 e23b8b39c4021e424c559fc98c94adca 274 SUPERFAMILY SSF52540 9 257 1.21E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 377 5.4E-110 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 PANTHER PTHR30525 9 395 1.7E-171 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 Gene3D G3DSA:1.10.1740.10 308 395 2.0E-24 T 22-04-2016 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 392 41.66 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 138 3.4E-38 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 SUPERFAMILY SSF55347 132 269 1.93E-53 T 22-04-2016 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 SUPERFAMILY SSF69055 297 395 8.37E-23 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 SUPERFAMILY SSF51735 8 155 6.3E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 Gene3D G3DSA:3.40.50.720 6 155 8.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 151 234 1.5E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 386 3.3E-30 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05845 2dbc789d5deebdb244e17a36eb635a06 396 PIRSF PIRSF006205 6 396 7.1E-143 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 SUPERFAMILY SSF52518 5 340 9.13E-85 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 Pfam PF02780 Transketolase, C-terminal domain 573 687 1.4E-12 T 22-04-2016 IPR033248 Transketolase, C-terminal domain HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 Gene3D G3DSA:3.40.50.970 350 567 2.5E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 TIGRFAM TIGR00232 tktlase_bact: transketolase 13 693 1.9E-209 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 SMART SM00861 374 556 1.0E-52 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 Gene3D G3DSA:3.40.50.970 6 340 1.2E-93 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 SUPERFAMILY SSF52922 566 696 5.1E-39 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 Pfam PF02779 Transketolase, pyrimidine binding domain 373 554 2.6E-35 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 PANTHER PTHR11624 6 339 6.8E-269 T 22-04-2016 IPR033247 Transketolase family HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 PANTHER PTHR11624 367 699 6.8E-269 T 22-04-2016 IPR033247 Transketolase family HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 SUPERFAMILY SSF52518 365 557 6.38E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 PANTHER PTHR11624:SF1 6 339 6.8E-269 T 22-04-2016 HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 PANTHER PTHR11624:SF1 367 699 6.8E-269 T 22-04-2016 HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 ProSitePatterns PS00802 Transketolase signature 2. 497 513 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 354 3.0E-104 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 HMPREF9228_RS04135 08331398e62dcc3bd5aa8914b14d1602 702 Gene3D G3DSA:3.40.50.920 570 696 3.4E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 HMPREF9228_RS04180 f84f4b92f5946fe58d19ac71300c400e 267 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 259 37.854 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 HMPREF9228_RS04180 f84f4b92f5946fe58d19ac71300c400e 267 SUPERFAMILY SSF51351 5 260 8.9E-82 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 HMPREF9228_RS04180 f84f4b92f5946fe58d19ac71300c400e 267 Pfam PF00121 Triosephosphate isomerase 8 255 3.2E-86 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 HMPREF9228_RS04180 f84f4b92f5946fe58d19ac71300c400e 267 Gene3D G3DSA:3.20.20.70 5 261 1.8E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS04180 f84f4b92f5946fe58d19ac71300c400e 267 ProSitePatterns PS00171 Triosephosphate isomerase active site. 174 184 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 HMPREF9228_RS04180 f84f4b92f5946fe58d19ac71300c400e 267 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 248 1.9E-54 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 HMPREF9228_RS04180 f84f4b92f5946fe58d19ac71300c400e 267 PANTHER PTHR21139 1 255 7.8E-97 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 HMPREF9228_RS09240 37811f4a0dbb200f6c33eff615f7aba3 577 Gene3D G3DSA:3.10.105.10 336 545 2.9E-41 T 22-04-2016 HMPREF9228_RS09240 37811f4a0dbb200f6c33eff615f7aba3 577 Gene3D G3DSA:3.40.190.10 208 335 2.1E-28 T 22-04-2016 HMPREF9228_RS09240 37811f4a0dbb200f6c33eff615f7aba3 577 Gene3D G3DSA:3.90.76.10 118 207 4.1E-8 T 22-04-2016 HMPREF9228_RS09240 37811f4a0dbb200f6c33eff615f7aba3 577 PANTHER PTHR30290 74 576 4.7E-68 T 22-04-2016 HMPREF9228_RS09240 37811f4a0dbb200f6c33eff615f7aba3 577 PANTHER PTHR30290 1 43 4.7E-68 T 22-04-2016 HMPREF9228_RS09240 37811f4a0dbb200f6c33eff615f7aba3 577 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 123 483 4.9E-56 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain HMPREF9228_RS09240 37811f4a0dbb200f6c33eff615f7aba3 577 SUPERFAMILY SSF53850 71 575 1.45E-84 T 22-04-2016 HMPREF9228_RS09240 37811f4a0dbb200f6c33eff615f7aba3 577 PIRSF PIRSF002741 51 563 9.8E-50 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 SMART SM00962 97 308 1.6E-104 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 Pfam PF00448 SRP54-type protein, GTPase domain 97 307 4.8E-66 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 SUPERFAMILY SSF47446 340 441 4.91E-35 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 TIGRFAM TIGR00959 ffh: signal recognition particle protein 1 439 2.1E-173 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 SMART SM00963 1 82 1.2E-26 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 Gene3D G3DSA:3.40.50.300 91 309 1.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 SUPERFAMILY SSF52540 38 366 3.98E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 SMART SM00382 96 314 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 1 454 33.463 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 Pfam PF02978 Signal peptide binding domain 340 437 9.1E-33 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 PANTHER PTHR11564 1 163 1.7E-231 T 22-04-2016 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 PANTHER PTHR11564 180 446 1.7E-231 T 22-04-2016 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 Pfam PF02881 SRP54-type protein, helical bundle domain 1 78 2.9E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 Gene3D G3DSA:1.20.120.140 1 85 7.5E-32 T 22-04-2016 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 PANTHER PTHR11564:SF7 1 163 1.7E-231 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 PANTHER PTHR11564:SF7 180 446 1.7E-231 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 281 294 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01910 a95eaf4c80c7c2f4b5d18b1c56e95a2a 544 Gene3D G3DSA:1.10.260.30 339 441 1.4E-38 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 HMPREF9228_RS02740 6a1a9642d4780052f75d8ec374ba58b4 314 Gene3D G3DSA:3.10.290.10 15 62 8.9E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS02740 6a1a9642d4780052f75d8ec374ba58b4 314 PANTHER PTHR11079 13 312 3.9E-95 T 22-04-2016 HMPREF9228_RS02740 6a1a9642d4780052f75d8ec374ba58b4 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 301 2.4E-78 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS02740 6a1a9642d4780052f75d8ec374ba58b4 314 Pfam PF00849 RNA pseudouridylate synthase 85 239 3.1E-28 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS02740 6a1a9642d4780052f75d8ec374ba58b4 314 SUPERFAMILY SSF55120 71 304 1.14E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS02740 6a1a9642d4780052f75d8ec374ba58b4 314 PANTHER PTHR11079:SF73 13 312 3.9E-95 T 22-04-2016 HMPREF9228_RS06065 2525c9f8c095a80be6fbcb4a2ad0436a 307 PANTHER PTHR30346 1 293 2.3E-32 T 22-04-2016 HMPREF9228_RS06065 2525c9f8c095a80be6fbcb4a2ad0436a 307 Pfam PF03466 LysR substrate binding domain 136 292 3.4E-9 T 22-04-2016 IPR005119 LysR, substrate-binding HMPREF9228_RS06065 2525c9f8c095a80be6fbcb4a2ad0436a 307 PANTHER PTHR30346:SF0 1 293 2.3E-32 T 22-04-2016 HMPREF9228_RS06065 2525c9f8c095a80be6fbcb4a2ad0436a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06065 2525c9f8c095a80be6fbcb4a2ad0436a 307 SUPERFAMILY SSF53850 92 294 2.71E-11 T 22-04-2016 HMPREF9228_RS06065 2525c9f8c095a80be6fbcb4a2ad0436a 307 SUPERFAMILY SSF46785 4 97 1.25E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06065 2525c9f8c095a80be6fbcb4a2ad0436a 307 Gene3D G3DSA:1.10.10.10 4 84 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06065 2525c9f8c095a80be6fbcb4a2ad0436a 307 Gene3D G3DSA:3.40.190.10 170 217 3.5E-6 T 22-04-2016 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 SUPERFAMILY SSF49493 165 241 3.79E-15 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 Gene3D G3DSA:1.10.287.110 8 109 2.2E-34 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 PANTHER PTHR24078 7 105 7.8E-67 T 22-04-2016 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 PANTHER PTHR24078 136 316 7.8E-67 T 22-04-2016 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 Pfam PF01556 DnaJ C terminal domain 174 314 2.7E-26 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 PANTHER PTHR24078:SF190 7 105 7.8E-67 T 22-04-2016 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 PANTHER PTHR24078:SF190 136 316 7.8E-67 T 22-04-2016 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 SMART SM00271 9 66 5.5E-29 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 Pfam PF00226 DnaJ domain 10 71 3.5E-26 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 PRINTS PR00625 DnaJ domain signature 46 66 1.284158E-23 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 PRINTS PR00625 DnaJ domain signature 66 85 1.284158E-23 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 PRINTS PR00625 DnaJ domain signature 12 30 1.284158E-23 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 PRINTS PR00625 DnaJ domain signature 30 45 1.284158E-23 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 SUPERFAMILY SSF49493 241 315 8.89E-13 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 Gene3D G3DSA:2.60.260.20 240 314 2.0E-12 T 22-04-2016 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 Gene3D G3DSA:2.60.260.20 164 236 9.1E-17 T 22-04-2016 HMPREF9228_RS00605 780f8322019d2bdfb204043b5dc20e7b 337 SUPERFAMILY SSF46565 8 111 4.19E-32 T 22-04-2016 IPR001623 DnaJ domain HMPREF9228_RS03765 d5cd8ad2d4e4e4973298d8cac45587d0 131 SUPERFAMILY SSF141734 16 117 3.01E-46 T 22-04-2016 HMPREF9228_RS03765 d5cd8ad2d4e4e4973298d8cac45587d0 131 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 65 114 1.0E-23 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 HMPREF9228_RS03765 d5cd8ad2d4e4e4973298d8cac45587d0 131 PANTHER PTHR21256 15 114 4.9E-58 T 22-04-2016 HMPREF9228_RS03765 d5cd8ad2d4e4e4973298d8cac45587d0 131 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 16 119 31.038 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 HMPREF9228_RS03765 d5cd8ad2d4e4e4973298d8cac45587d0 131 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 42 114 1.2E-34 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 SMART SM01217 601 671 4.1E-25 T 22-04-2016 IPR026891 Fibronectin type III-like domain HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 Pfam PF14310 Fibronectin type III-like domain 602 670 2.9E-21 T 22-04-2016 IPR026891 Fibronectin type III-like domain HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PRINTS PR00133 Glycosyl hydrolase family 3 signature 211 229 2.3E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PRINTS PR00133 Glycosyl hydrolase family 3 signature 28 44 2.3E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PRINTS PR00133 Glycosyl hydrolase family 3 signature 141 157 2.3E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PRINTS PR00133 Glycosyl hydrolase family 3 signature 64 83 2.3E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PRINTS PR00133 Glycosyl hydrolase family 3 signature 110 126 2.3E-31 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 26 278 1.1E-51 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PANTHER PTHR30620 3 322 7.2E-227 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PANTHER PTHR30620 343 685 7.2E-227 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 Gene3D G3DSA:3.40.50.1700 300 575 3.4E-59 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 343 572 1.6E-41 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 SUPERFAMILY SSF51445 3 313 1.68E-84 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 SUPERFAMILY SSF52279 342 575 1.31E-44 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 211 228 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 Gene3D G3DSA:3.20.20.300 4 279 1.8E-93 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PANTHER PTHR30620:SF18 3 322 7.2E-227 T 22-04-2016 HMPREF9228_RS09655 57615dfdf0161fe89824806da404753a 833 PANTHER PTHR30620:SF18 343 685 7.2E-227 T 22-04-2016 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 527 541 1.4E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 483 499 1.4E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 199 211 1.4E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 216 229 1.4E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 127 565 1.9E-100 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 Pfam PF01336 OB-fold nucleic acid binding domain 23 102 3.4E-17 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 6 572 35.025 T 22-04-2016 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 Gene3D G3DSA:3.30.930.10 413 592 3.9E-105 T 22-04-2016 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 Gene3D G3DSA:3.30.930.10 140 284 3.9E-105 T 22-04-2016 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PANTHER PTHR22594 1 305 2.9E-235 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PANTHER PTHR22594 369 435 2.9E-235 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PANTHER PTHR22594 457 580 2.9E-235 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 Pfam PF02938 GAD domain 321 400 1.7E-15 T 22-04-2016 IPR029351 GAD domain HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 SUPERFAMILY SSF55681 406 565 9.36E-97 T 22-04-2016 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 SUPERFAMILY SSF55681 127 319 9.36E-97 T 22-04-2016 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 7 588 1.5E-209 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 ProDom PD609240 SUBUNIT E AMIDOTRANSFERASE 6.3.5.- LIGASE GLUTAMYL-TRNAGLN GLU-ADT BIOSYNTHESIS TRANSFERASE B 303 429 3.0E-4 T 22-04-2016 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 SUPERFAMILY SSF50249 6 105 7.62E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 Gene3D G3DSA:2.40.50.140 6 106 2.7E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 SUPERFAMILY SSF55261 297 418 2.94E-33 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PANTHER PTHR22594:SF5 1 305 2.9E-235 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PANTHER PTHR22594:SF5 369 435 2.9E-235 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 PANTHER PTHR22594:SF5 457 580 2.9E-235 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 HMPREF9228_RS02520 75b5bde1c6f267a5ab0fd2d2c74f6903 599 Gene3D G3DSA:3.30.1360.30 285 412 3.8E-41 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 SMART SM00354 1 71 1.6E-30 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 Gene3D G3DSA:1.10.260.40 3 53 1.1E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 Gene3D G3DSA:3.40.50.2300 54 170 1.8E-36 T 22-04-2016 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 184 4.8E-13 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 SUPERFAMILY SSF53822 58 331 2.19E-44 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 PANTHER PTHR30146 1 184 2.6E-73 T 22-04-2016 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 PANTHER PTHR30146 205 341 2.6E-73 T 22-04-2016 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.3E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 PANTHER PTHR30146:SF31 1 184 2.6E-73 T 22-04-2016 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 PANTHER PTHR30146:SF31 205 341 2.6E-73 T 22-04-2016 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 SUPERFAMILY SSF47413 1 60 8.84E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00485 b150efd6dc30ab02c936e103cf5defb1 361 Gene3D G3DSA:3.40.50.2300 171 325 6.6E-25 T 22-04-2016 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 SUPERFAMILY SSF53067 250 440 1.41E-41 T 22-04-2016 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 PANTHER PTHR10196 1 437 4.9E-96 T 22-04-2016 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 PANTHER PTHR10196:SF67 1 437 4.9E-96 T 22-04-2016 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 SUPERFAMILY SSF53067 4 249 3.63E-41 T 22-04-2016 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 350 371 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 437 2.8E-24 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 130 142 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 247 9.5E-38 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 PIRSF PIRSF000538 2 445 1.6E-73 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 Gene3D G3DSA:3.30.420.40 1 247 8.1E-43 T 22-04-2016 HMPREF9228_RS09035 c2a89e8822d0f10f6257f143d6500211 494 Gene3D G3DSA:3.30.420.40 250 438 4.6E-32 T 22-04-2016 HMPREF9228_RS09375 a6dba525d7437fe68071f07757523093 914 Pfam PF12698 ABC-2 family transporter protein 31 695 9.5E-11 T 22-04-2016 HMPREF9228_RS09375 a6dba525d7437fe68071f07757523093 914 PANTHER PTHR30294 524 724 2.0E-89 T 22-04-2016 HMPREF9228_RS09375 a6dba525d7437fe68071f07757523093 914 PANTHER PTHR30294 1 227 2.0E-89 T 22-04-2016 HMPREF9228_RS09375 a6dba525d7437fe68071f07757523093 914 PANTHER PTHR30294:SF4 524 724 2.0E-89 T 22-04-2016 HMPREF9228_RS09375 a6dba525d7437fe68071f07757523093 914 PANTHER PTHR30294:SF4 1 227 2.0E-89 T 22-04-2016 HMPREF9228_RS09375 a6dba525d7437fe68071f07757523093 914 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 510 709 3.4E-45 T 22-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal HMPREF9228_RS09375 a6dba525d7437fe68071f07757523093 914 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 174 3.9E-41 T 22-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PANTHER PTHR11946:SF5 132 870 3.8E-141 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PANTHER PTHR11946:SF5 6 106 3.8E-141 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PRINTS PR00986 Valyl-tRNA synthetase signature 551 569 1.89E-16 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PRINTS PR00986 Valyl-tRNA synthetase signature 50 61 1.89E-16 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PRINTS PR00986 Valyl-tRNA synthetase signature 267 284 1.89E-16 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PRINTS PR00986 Valyl-tRNA synthetase signature 516 537 1.89E-16 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PRINTS PR00986 Valyl-tRNA synthetase signature 396 409 1.89E-16 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 Gene3D G3DSA:1.10.730.10 641 835 1.4E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 Gene3D G3DSA:3.90.740.10 236 382 1.8E-28 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PANTHER PTHR11946 132 870 3.8E-141 T 22-04-2016 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 PANTHER PTHR11946 6 106 3.8E-141 T 22-04-2016 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 Pfam PF08264 Anticodon-binding domain of tRNA 689 844 1.2E-23 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 Hamap MF_02005 Valine--tRNA ligase [valS]. 15 876 28.18 T 22-04-2016 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 SUPERFAMILY SSF47323 651 887 3.92E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 Gene3D G3DSA:3.40.50.620 17 226 2.3E-100 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 Gene3D G3DSA:3.40.50.620 394 629 2.3E-100 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 111 1.2E-19 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 137 634 5.9E-67 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 SUPERFAMILY SSF52374 138 230 1.21E-104 T 22-04-2016 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 SUPERFAMILY SSF52374 391 640 1.21E-104 T 22-04-2016 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 SUPERFAMILY SSF52374 14 111 1.21E-104 T 22-04-2016 HMPREF9228_RS01505 438d811d5f2afc1fc2d3c4b0dc9ef63c 911 SUPERFAMILY SSF50677 229 380 4.71E-33 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 Pfam PF00005 ABC transporter 30 172 2.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 SUPERFAMILY SSF50331 247 357 5.53E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 Gene3D G3DSA:3.40.50.300 11 249 3.3E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 SMART SM00382 39 222 4.0E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 SUPERFAMILY SSF52540 15 252 1.13E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 PANTHER PTHR24220:SF150 16 296 9.4E-122 T 22-04-2016 HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 Pfam PF08402 TOBE domain 287 359 1.3E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 HMPREF9228_RS00795 a2de68e13717c746d171aac266ea51eb 372 PANTHER PTHR24220 16 296 9.4E-122 T 22-04-2016 HMPREF9228_RS04310 0645b726bdb3de7ee0a344833d23eae0 317 SUPERFAMILY SSF56235 2 314 4.09E-97 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS04310 0645b726bdb3de7ee0a344833d23eae0 317 PANTHER PTHR35527:SF1 1 313 4.4E-79 T 22-04-2016 HMPREF9228_RS04310 0645b726bdb3de7ee0a344833d23eae0 317 PANTHER PTHR35527 1 313 4.4E-79 T 22-04-2016 HMPREF9228_RS04310 0645b726bdb3de7ee0a344833d23eae0 317 Gene3D G3DSA:3.60.60.10 2 315 2.0E-95 T 22-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 HMPREF9228_RS04310 0645b726bdb3de7ee0a344833d23eae0 317 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 314 5.6E-90 T 22-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 SMART SM00382 422 593 2.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 SMART SM00382 30 208 0.0024 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 PANTHER PTHR19211 648 686 2.1E-207 T 22-04-2016 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 PANTHER PTHR19211 409 606 2.1E-207 T 22-04-2016 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 PANTHER PTHR19211 1 301 2.1E-207 T 22-04-2016 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 SUPERFAMILY SSF52540 6 203 8.53E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 Gene3D G3DSA:3.40.50.300 8 250 1.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 Gene3D G3DSA:3.40.50.300 407 596 9.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 Pfam PF12848 ABC transporter 195 253 2.6E-5 T 22-04-2016 IPR032781 ABC-transporter extension domain HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 PANTHER PTHR19211:SF55 648 686 2.1E-207 T 22-04-2016 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 PANTHER PTHR19211:SF55 409 606 2.1E-207 T 22-04-2016 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 PANTHER PTHR19211:SF55 1 301 2.1E-207 T 22-04-2016 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 Pfam PF00005 ABC transporter 23 152 2.6E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 Pfam PF00005 ABC transporter 413 548 2.6E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 SUPERFAMILY SSF52540 404 598 1.13E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 Pfam PF16326 ABC transporter C-terminal domain 674 734 6.2E-12 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS01930 5f7df2ef775fb8d7b83af47c7447fe85 737 ProSitePatterns PS00211 ABC transporters family signature. 521 535 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 PANTHER PTHR10031 1 75 7.1E-16 T 22-04-2016 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 SUPERFAMILY SSF81333 15 75 4.18E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 PRINTS PR00124 ATP synthase C subunit signature 51 76 1.2E-13 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 PRINTS PR00124 ATP synthase C subunit signature 34 49 1.2E-13 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 PRINTS PR00124 ATP synthase C subunit signature 13 32 1.2E-13 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 ProSitePatterns PS00605 ATP synthase c subunit signature. 41 62 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 Pfam PF00137 ATP synthase subunit C 17 74 4.0E-13 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 22 75 4.7E-20 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 Gene3D G3DSA:1.20.20.10 15 75 3.5E-24 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 HMPREF9228_RS01565 0e7c816ca9555a09d337dc62cb376d49 76 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 76 13.462 T 22-04-2016 HMPREF9228_RS00415 c9ff74a1dbb1b115fe91b1afe1d488af 285 PANTHER PTHR20855:SF3 84 282 5.3E-27 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 HMPREF9228_RS00415 c9ff74a1dbb1b115fe91b1afe1d488af 285 PANTHER PTHR20855 84 282 5.3E-27 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 HMPREF9228_RS00415 c9ff74a1dbb1b115fe91b1afe1d488af 285 Pfam PF03006 Haemolysin-III related 72 275 5.2E-41 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 418 1.6E-86 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 PANTHER PTHR19376 214 627 0.0 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 Pfam PF04998 RNA polymerase Rpb1, domain 5 847 1221 7.0E-63 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 PANTHER PTHR19376:SF32 214 627 0.0 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 PANTHER PTHR19376:SF32 1209 1269 0.0 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 PANTHER PTHR19376:SF32 2 157 0.0 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 PANTHER PTHR19376:SF32 668 1168 0.0 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 SMART SM00663 311 590 4.7E-169 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 PANTHER PTHR19376 2 157 0.0 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 PANTHER PTHR19376 668 1168 0.0 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 Pfam PF00623 RNA polymerase Rpb1, domain 2 420 561 2.4E-33 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 9 1273 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 PANTHER PTHR19376 1209 1269 0.0 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1282 9.927 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 Pfam PF05000 RNA polymerase Rpb1, domain 4 772 835 2.3E-9 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 Gene3D G3DSA:2.40.40.20 493 564 2.9E-35 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 Gene3D G3DSA:2.40.40.20 425 452 2.9E-35 T 22-04-2016 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 Pfam PF04983 RNA polymerase Rpb1, domain 3 565 740 3.0E-17 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 HMPREF9228_RS06765 903609d0cb9a219eb420279c10c7509c 1345 SUPERFAMILY SSF64484 5 1284 0.0 T 22-04-2016 HMPREF9228_RS06285 93bfc4fb00512925789c4e2d6af3af37 184 Pfam PF03167 Uracil DNA glycosylase superfamily 16 174 3.1E-7 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like HMPREF9228_RS06285 93bfc4fb00512925789c4e2d6af3af37 184 Gene3D G3DSA:3.40.470.10 9 174 1.6E-35 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like HMPREF9228_RS06285 93bfc4fb00512925789c4e2d6af3af37 184 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 8 161 1.1E-29 T 22-04-2016 IPR026353 Hypoxanthine-DNA glycosylase HMPREF9228_RS06285 93bfc4fb00512925789c4e2d6af3af37 184 SUPERFAMILY SSF52141 9 172 4.32E-23 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like HMPREF9228_RS04360 772755d9d9188732fcdc5dc8f3725087 169 PANTHER PTHR11106 9 140 1.3E-57 T 22-04-2016 HMPREF9228_RS04360 772755d9d9188732fcdc5dc8f3725087 169 Gene3D G3DSA:3.40.220.10 3 144 2.7E-53 T 22-04-2016 HMPREF9228_RS04360 772755d9d9188732fcdc5dc8f3725087 169 Pfam PF01661 Macro domain 19 131 7.9E-38 T 22-04-2016 IPR002589 Macro domain HMPREF9228_RS04360 772755d9d9188732fcdc5dc8f3725087 169 SUPERFAMILY SSF52949 3 144 1.08E-49 T 22-04-2016 HMPREF9228_RS04360 772755d9d9188732fcdc5dc8f3725087 169 SMART SM00506 2 132 1.7E-45 T 22-04-2016 IPR002589 Macro domain HMPREF9228_RS08130 963e0ca054be7f5b09b190421e470ad5 61 Pfam PF00253 Ribosomal protein S14p/S29e 11 60 1.6E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08130 963e0ca054be7f5b09b190421e470ad5 61 SUPERFAMILY SSF57716 4 61 8.55E-22 T 22-04-2016 HMPREF9228_RS08130 963e0ca054be7f5b09b190421e470ad5 61 PANTHER PTHR19836 13 61 2.5E-35 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08130 963e0ca054be7f5b09b190421e470ad5 61 Gene3D G3DSA:4.10.830.10 1 61 6.1E-29 T 22-04-2016 HMPREF9228_RS08130 963e0ca054be7f5b09b190421e470ad5 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.067 T 22-04-2016 IPR023053 Ribosomal protein S14, type Z HMPREF9228_RS08130 963e0ca054be7f5b09b190421e470ad5 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05135 ee44de5825f3acfcafbc3ad4f517dc07 293 Pfam PF04055 Radical SAM superfamily 74 226 5.5E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 HMPREF9228_RS05135 ee44de5825f3acfcafbc3ad4f517dc07 293 ProSitePatterns PS01087 Radical activating enzymes signature. 67 88 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 HMPREF9228_RS05135 ee44de5825f3acfcafbc3ad4f517dc07 293 SUPERFAMILY SSF102114 74 266 2.49E-29 T 22-04-2016 HMPREF9228_RS05135 ee44de5825f3acfcafbc3ad4f517dc07 293 Gene3D G3DSA:3.80.30.10 120 293 1.0E-60 T 22-04-2016 HMPREF9228_RS05135 ee44de5825f3acfcafbc3ad4f517dc07 293 PANTHER PTHR30352 53 292 4.5E-79 T 22-04-2016 HMPREF9228_RS05135 ee44de5825f3acfcafbc3ad4f517dc07 293 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 56 288 6.7E-104 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 HMPREF9228_RS05135 ee44de5825f3acfcafbc3ad4f517dc07 293 PANTHER PTHR30352:SF9 53 292 4.5E-79 T 22-04-2016 HMPREF9228_RS05135 ee44de5825f3acfcafbc3ad4f517dc07 293 Pfam PF13353 4Fe-4S single cluster domain 65 184 4.2E-19 T 22-04-2016 HMPREF9228_RS02545 87f6b16283ea22cc56496090591b8b1c 366 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 70 165 1.7E-18 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 HMPREF9228_RS02545 87f6b16283ea22cc56496090591b8b1c 366 PANTHER PTHR30614 67 276 2.0E-53 T 22-04-2016 HMPREF9228_RS02545 87f6b16283ea22cc56496090591b8b1c 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 271 3.6E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02545 87f6b16283ea22cc56496090591b8b1c 366 SUPERFAMILY SSF161098 69 259 1.44E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02545 87f6b16283ea22cc56496090591b8b1c 366 Gene3D G3DSA:1.10.3720.10 69 272 2.6E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 SUPERFAMILY SSF51556 92 155 4.81E-30 T 22-04-2016 IPR032466 Metal-dependent hydrolase HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 SUPERFAMILY SSF51556 217 489 4.81E-30 T 22-04-2016 IPR032466 Metal-dependent hydrolase HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 Gene3D G3DSA:2.30.40.10 68 85 5.5E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 Gene3D G3DSA:2.30.40.10 495 538 5.5E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 SUPERFAMILY SSF51338 495 539 2.79E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 SUPERFAMILY SSF51338 75 92 2.79E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 Gene3D G3DSA:3.20.20.140 223 494 1.9E-29 T 22-04-2016 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 PANTHER PTHR22642:SF2 80 539 6.5E-82 T 22-04-2016 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 PANTHER PTHR22642 80 539 6.5E-82 T 22-04-2016 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 Pfam PF07969 Amidohydrolase family 82 539 3.6E-56 T 22-04-2016 IPR013108 Amidohydrolase 3 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 Gene3D G3DSA:2.30.40.10 17 39 7.8E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS00240 2a4b782e6b286746ffd2384e8d0db49c 539 Gene3D G3DSA:2.30.40.10 86 122 7.8E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS05630 531c4e9e3ec6627991943c0b9da990a3 174 SMART SM00471 34 156 6.9E-4 T 22-04-2016 IPR003607 HD/PDEase domain HMPREF9228_RS05630 531c4e9e3ec6627991943c0b9da990a3 174 Gene3D G3DSA:1.10.3210.10 17 150 6.2E-15 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS05630 531c4e9e3ec6627991943c0b9da990a3 174 Pfam PF01966 HD domain 38 146 9.4E-8 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS05630 531c4e9e3ec6627991943c0b9da990a3 174 SUPERFAMILY SSF109604 30 160 2.3E-16 T 22-04-2016 HMPREF9228_RS03975 42a3fd62c2b9b21cd8156fd8d8a9da52 115 Pfam PF13397 RNA polymerase-binding protein 4 107 6.5E-41 T 22-04-2016 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 HMPREF9228_RS03975 42a3fd62c2b9b21cd8156fd8d8a9da52 115 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 1 110 25.026 T 22-04-2016 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 SUPERFAMILY SSF101904 819 896 8.11E-44 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 SUPERFAMILY SSF101904 564 792 8.11E-44 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 SMART SM00434 24 477 3.1E-241 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 PANTHER PTHR10169 696 799 4.1E-232 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 PANTHER PTHR10169 819 855 4.1E-232 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 PANTHER PTHR10169 13 499 4.1E-232 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 PANTHER PTHR10169 562 679 4.1E-232 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 SUPERFAMILY SSF56719 3 500 2.35E-160 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 PANTHER PTHR10169:SF48 696 799 4.1E-232 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 PANTHER PTHR10169:SF48 819 855 4.1E-232 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 PANTHER PTHR10169:SF48 13 499 4.1E-232 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 PANTHER PTHR10169:SF48 562 679 4.1E-232 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 Gene3D G3DSA:3.30.1360.40 248 345 2.4E-27 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 45 479 6.6E-146 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 855 0.001 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 791 4.1E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 Gene3D G3DSA:2.120.10.90 564 899 3.9E-50 T 22-04-2016 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 Gene3D G3DSA:3.90.199.10 44 247 5.9E-108 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 HMPREF9228_RS03435 6ed3a7d38751b112ae20de155e051eda 906 Gene3D G3DSA:3.90.199.10 346 410 5.9E-108 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 HMPREF9228_RS01120 a304535b16e36ba40a85fa63c10e10d9 230 Pfam PF10634 Fe2+ transport protein 61 226 1.7E-56 T 22-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type HMPREF9228_RS03910 11de0f61fc662da0260e27424b345a11 316 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 140 152 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 HMPREF9228_RS03910 11de0f61fc662da0260e27424b345a11 316 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 272 5.1E-66 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 HMPREF9228_RS03910 11de0f61fc662da0260e27424b345a11 316 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 8 277 16.02 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 HMPREF9228_RS03910 11de0f61fc662da0260e27424b345a11 316 PANTHER PTHR30589:SF0 1 297 9.8E-90 T 22-04-2016 HMPREF9228_RS03910 11de0f61fc662da0260e27424b345a11 316 PANTHER PTHR30589 1 297 9.8E-90 T 22-04-2016 HMPREF9228_RS03910 11de0f61fc662da0260e27424b345a11 316 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 273 4.2E-47 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 PANTHER PTHR30191 1 788 0.0 T 22-04-2016 HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 Gene3D G3DSA:3.20.70.20 12 786 7.2E-265 T 22-04-2016 HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 Pfam PF02901 Pyruvate formate lyase-like 29 647 5.7E-183 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 18 786 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 SUPERFAMILY SSF51998 12 786 3.02E-237 T 22-04-2016 HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 PIRSF PIRSF000379 15 788 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 PANTHER PTHR30191:SF0 1 788 0.0 T 22-04-2016 HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 ProSitePatterns PS00850 Glycine radical domain signature. 758 766 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site HMPREF9228_RS05140 1951f18bd10b4211a45cc871da68a246 791 Pfam PF01228 Glycine radical 664 769 2.0E-34 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 PANTHER PTHR23135 20 278 1.2E-146 T 22-04-2016 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 SUPERFAMILY SSF53244 351 503 2.2E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 Pfam PF08245 Mur ligase middle domain 130 332 9.2E-17 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 PANTHER PTHR23135:SF5 302 494 1.2E-146 T 22-04-2016 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 PANTHER PTHR23135:SF5 20 278 1.2E-146 T 22-04-2016 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 28 499 2.6E-122 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 Pfam PF02875 Mur ligase family, glutamate ligase domain 354 436 4.3E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 SUPERFAMILY SSF53623 111 248 1.37E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 SUPERFAMILY SSF53623 277 349 1.37E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 SUPERFAMILY SSF51984 28 113 1.06E-24 T 22-04-2016 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 PANTHER PTHR23135 302 494 1.2E-146 T 22-04-2016 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 Gene3D G3DSA:3.90.190.20 354 505 1.4E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 25 506 33.87 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 Gene3D G3DSA:3.40.50.720 27 113 3.2E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 Gene3D G3DSA:3.40.1190.10 114 353 2.3E-65 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02965 2bb6ece6ab4606f299c79d9e69dc779b 512 Pfam PF01225 Mur ligase family, catalytic domain 29 125 6.9E-22 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS03540 94ce2d59005fb0a7bf3cc6b928d95b20 432 SUPERFAMILY SSF48208 4 430 1.91E-171 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 HMPREF9228_RS03540 94ce2d59005fb0a7bf3cc6b928d95b20 432 Pfam PF06824 Protein of unknown function (DUF1237) 28 423 3.1E-147 T 22-04-2016 IPR008313 Meiotically up-regulated gene 157 protein HMPREF9228_RS03540 94ce2d59005fb0a7bf3cc6b928d95b20 432 SMART SM01149 25 424 1.4E-273 T 22-04-2016 IPR008313 Meiotically up-regulated gene 157 protein HMPREF9228_RS03540 94ce2d59005fb0a7bf3cc6b928d95b20 432 PANTHER PTHR31047 28 428 5.1E-182 T 22-04-2016 HMPREF9228_RS03540 94ce2d59005fb0a7bf3cc6b928d95b20 432 Gene3D G3DSA:1.50.10.10 9 429 9.3E-170 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 HMPREF9228_RS03540 94ce2d59005fb0a7bf3cc6b928d95b20 432 PIRSF PIRSF028846 1 432 8.0E-205 T 22-04-2016 IPR008313 Meiotically up-regulated gene 157 protein HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 SUPERFAMILY SSF52279 316 560 1.31E-48 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 164 1.1E-32 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 PRINTS PR00133 Glycosyl hydrolase family 3 signature 117 133 1.1E-32 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 PRINTS PR00133 Glycosyl hydrolase family 3 signature 218 236 1.1E-32 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 PRINTS PR00133 Glycosyl hydrolase family 3 signature 34 50 1.1E-32 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 PRINTS PR00133 Glycosyl hydrolase family 3 signature 71 90 1.1E-32 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 67 279 2.0E-47 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 Gene3D G3DSA:3.20.20.300 9 286 2.9E-91 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 SMART SM01217 591 661 2.0E-31 T 22-04-2016 IPR026891 Fibronectin type III-like domain HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 PANTHER PTHR30620:SF18 10 675 5.8E-259 T 22-04-2016 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 Gene3D G3DSA:3.40.50.1700 302 556 6.5E-62 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 316 537 3.6E-52 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 218 235 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 PANTHER PTHR30620 10 675 5.8E-259 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 SUPERFAMILY SSF51445 9 315 2.0E-84 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS07135 8b71a0d87610739f73c424ca062bb857 757 Pfam PF14310 Fibronectin type III-like domain 591 661 2.9E-26 T 22-04-2016 IPR026891 Fibronectin type III-like domain HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 20 372 41.273 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 Gene3D G3DSA:3.40.50.20 13 124 9.1E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 SUPERFAMILY SSF52440 15 98 1.73E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 SUPERFAMILY SSF56059 116 318 1.03E-57 T 22-04-2016 HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 Pfam PF02222 ATP-grasp domain 125 297 4.9E-47 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 20 374 9.5E-110 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 Gene3D G3DSA:3.30.1490.20 131 198 2.8E-21 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 PANTHER PTHR11609:SF5 1 379 2.7E-128 T 22-04-2016 HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 PANTHER PTHR11609 1 379 2.7E-128 T 22-04-2016 HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 SUPERFAMILY SSF51246 321 385 2.83E-17 T 22-04-2016 IPR011054 Rudiment single hybrid motif HMPREF9228_RS06420 9ab018b2d46a17c34db8cd652348fc81 392 Gene3D G3DSA:3.30.470.20 199 379 4.0E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 Gene3D G3DSA:1.20.1580.10 100 177 4.7E-32 T 22-04-2016 HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 Gene3D G3DSA:1.20.1580.10 297 369 4.7E-32 T 22-04-2016 HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 SUPERFAMILY SSF52540 503 829 3.76E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 SUPERFAMILY SSF52540 223 278 1.12E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 SUPERFAMILY SSF52540 14 47 1.12E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 SUPERFAMILY SSF52540 355 478 1.12E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 PANTHER PTHR32282 6 833 4.8E-243 T 22-04-2016 HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 PANTHER PTHR32282:SF2 6 833 4.8E-243 T 22-04-2016 HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 Gene3D G3DSA:1.20.1580.10 585 718 6.4E-40 T 22-04-2016 HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 Gene3D G3DSA:1.10.8.280 179 296 2.9E-19 T 22-04-2016 HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 ProSitePatterns PS00211 ABC transporters family signature. 728 742 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 Gene3D G3DSA:3.40.50.300 500 562 2.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 Gene3D G3DSA:3.40.50.300 5 64 4.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 Gene3D G3DSA:3.40.50.300 719 833 2.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06050 5ab1735c98ab94108a8c0e848bf9ede2 834 Gene3D G3DSA:3.40.50.300 370 487 4.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 54 303 26.002 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 SUPERFAMILY SSF53335 102 243 6.38E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 102 241 1.1E-35 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 Gene3D G3DSA:3.40.50.150 109 187 3.6E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 PANTHER PTHR23417:SF14 49 234 5.0E-38 T 22-04-2016 HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 PANTHER PTHR23417:SF14 258 295 5.0E-38 T 22-04-2016 HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 PANTHER PTHR23417 49 234 5.0E-38 T 22-04-2016 HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 PANTHER PTHR23417 258 295 5.0E-38 T 22-04-2016 HMPREF9228_RS07550 f55272de9f57c8c206be63a0a0b6e08b 307 Pfam PF02390 Putative methyltransferase 105 240 8.9E-37 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 HMPREF9228_RS03240 4c93844a9fc6138e2352c9acf4003591 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 332 1.0E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03240 4c93844a9fc6138e2352c9acf4003591 334 SUPERFAMILY SSF161098 124 315 7.59E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03240 4c93844a9fc6138e2352c9acf4003591 334 PANTHER PTHR30465 47 333 1.4E-136 T 22-04-2016 HMPREF9228_RS03240 4c93844a9fc6138e2352c9acf4003591 334 PANTHER PTHR30465:SF29 47 333 1.4E-136 T 22-04-2016 HMPREF9228_RS03240 4c93844a9fc6138e2352c9acf4003591 334 Gene3D G3DSA:1.10.3720.10 123 329 1.7E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03240 4c93844a9fc6138e2352c9acf4003591 334 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 54 94 2.4E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain HMPREF9228_RS05640 4cd11500fc98299e25f2a705fe23c878 269 PANTHER PTHR10953 1 255 1.9E-100 T 22-04-2016 HMPREF9228_RS05640 4cd11500fc98299e25f2a705fe23c878 269 Pfam PF00899 ThiF family 11 245 3.9E-65 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 HMPREF9228_RS05640 4cd11500fc98299e25f2a705fe23c878 269 Gene3D G3DSA:3.40.50.720 3 249 1.6E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05640 4cd11500fc98299e25f2a705fe23c878 269 PANTHER PTHR10953:SF153 1 255 1.9E-100 T 22-04-2016 HMPREF9228_RS05640 4cd11500fc98299e25f2a705fe23c878 269 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 10 212 7.7E-87 T 22-04-2016 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 HMPREF9228_RS05640 4cd11500fc98299e25f2a705fe23c878 269 SUPERFAMILY SSF69572 3 263 1.02E-94 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 SUPERFAMILY SSF51735 98 285 5.4E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 PANTHER PTHR10996:SF18 3 359 8.5E-166 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 Gene3D G3DSA:3.40.50.720 110 287 8.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 PANTHER PTHR10996 3 359 8.5E-166 T 22-04-2016 HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 284 4.0E-47 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 SUPERFAMILY SSF52283 3 127 9.78E-39 T 22-04-2016 HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 SUPERFAMILY SSF55021 327 398 1.41E-13 T 22-04-2016 HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 Gene3D G3DSA:3.40.50.720 1 109 1.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 316 1.1E-32 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 HMPREF9228_RS02905 5074dc8eec94f82932000226be6542b9 399 Gene3D G3DSA:3.30.70.260 314 398 9.2E-23 T 22-04-2016 HMPREF9228_RS00860 306b765aa8cb7647d123b2419869fba4 329 Gene3D G3DSA:3.20.20.70 2 305 3.9E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS00860 306b765aa8cb7647d123b2419869fba4 329 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS00860 306b765aa8cb7647d123b2419869fba4 329 SUPERFAMILY SSF51569 1 304 1.57E-68 T 22-04-2016 HMPREF9228_RS00860 306b765aa8cb7647d123b2419869fba4 329 Pfam PF00701 Dihydrodipicolinate synthetase family 5 301 1.5E-41 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS00860 306b765aa8cb7647d123b2419869fba4 329 PANTHER PTHR12128 5 318 2.7E-56 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS00860 306b765aa8cb7647d123b2419869fba4 329 SMART SM01130 4 304 2.2E-67 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS00860 306b765aa8cb7647d123b2419869fba4 329 PIRSF PIRSF001365 1 314 1.2E-71 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 SUPERFAMILY SSF55973 252 402 3.41E-65 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 PANTHER PTHR11964 1 398 1.1E-237 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 278 286 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 Gene3D G3DSA:3.30.300.10 13 147 1.6E-41 T 22-04-2016 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 Gene3D G3DSA:3.30.300.10 263 403 2.3E-69 T 22-04-2016 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 Gene3D G3DSA:3.30.300.10 148 251 5.3E-41 T 22-04-2016 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 8 403 1.3E-166 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 PIRSF PIRSF000497 1 404 1.3E-164 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 SUPERFAMILY SSF55973 6 110 1.61E-39 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 SUPERFAMILY SSF55973 126 251 5.3E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 130 140 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 Pfam PF02772 S-adenosylmethionine synthetase, central domain 129 250 9.5E-44 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 103 1.1E-35 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 252 392 6.0E-67 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS02275 273f3f57c5e584b54326d9b935649a70 406 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 403 54.295 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 HMPREF9228_RS07210 af36da2c5904fc1d5274dc1eddbd8391 197 Gene3D G3DSA:3.80.30.10 68 171 2.2E-13 T 22-04-2016 HMPREF9228_RS07210 af36da2c5904fc1d5274dc1eddbd8391 197 PIRSF PIRSF000368 1 173 5.5E-62 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- HMPREF9228_RS07210 af36da2c5904fc1d5274dc1eddbd8391 197 PANTHER PTHR30352 1 175 9.8E-72 T 22-04-2016 HMPREF9228_RS07210 af36da2c5904fc1d5274dc1eddbd8391 197 Pfam PF13353 4Fe-4S single cluster domain 16 156 9.2E-49 T 22-04-2016 HMPREF9228_RS07210 af36da2c5904fc1d5274dc1eddbd8391 197 SUPERFAMILY SSF102114 26 103 9.81E-11 T 22-04-2016 HMPREF9228_RS07210 af36da2c5904fc1d5274dc1eddbd8391 197 PANTHER PTHR30352:SF2 1 175 9.8E-72 T 22-04-2016 HMPREF9228_RS07210 af36da2c5904fc1d5274dc1eddbd8391 197 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 6 158 5.3E-50 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 Gene3D G3DSA:3.40.192.10 68 188 2.9E-61 T 22-04-2016 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 PANTHER PTHR11606 3 448 4.1E-248 T 22-04-2016 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 446 1.4E-92 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 SUPERFAMILY SSF51735 202 447 8.38E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 Gene3D G3DSA:1.10.285.10 373 447 1.6E-26 T 22-04-2016 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 Gene3D G3DSA:1.10.285.10 5 67 2.5E-27 T 22-04-2016 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 185 3.4E-50 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 236 256 5.0E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 5.0E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 5.0E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 5.0E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 PIRSF PIRSF000185 22 448 3.2E-125 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 SMART SM00839 204 446 9.3E-98 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 Gene3D G3DSA:3.40.50.720 209 372 1.3E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 PANTHER PTHR11606:SF4 3 448 4.1E-248 T 22-04-2016 HMPREF9228_RS00060 0e269e46eff8106a9e7eafc57edf4f23 448 SUPERFAMILY SSF53223 6 196 1.18E-72 T 22-04-2016 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 SUPERFAMILY SSF88688 537 632 3.92E-20 T 22-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 Gene3D G3DSA:3.20.110.10 218 540 7.5E-92 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 Gene3D G3DSA:1.20.1270.50 541 636 1.4E-16 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 Pfam PF09261 Alpha mannosidase middle domain 538 617 1.5E-24 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 SUPERFAMILY SSF74650 675 1048 6.28E-41 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 269 529 2.2E-92 T 22-04-2016 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0005975 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 PANTHER PTHR11607 184 1020 1.1E-240 T 22-04-2016 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 681 1047 8.7E-56 T 22-04-2016 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0006013|GO:0015923 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 SMART SM00872 538 617 1.3E-31 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 PANTHER PTHR11607:SF15 184 1020 1.1E-240 T 22-04-2016 HMPREF9228_RS03495 3d02225a7ae506210ba2bb7ab6263920 1049 SUPERFAMILY SSF88713 261 534 6.67E-77 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 HMPREF9228_RS04200 9039633f95af6297a3343170f5b07e60 326 SUPERFAMILY SSF53223 4 95 1.73E-17 T 22-04-2016 HMPREF9228_RS04200 9039633f95af6297a3343170f5b07e60 326 Gene3D G3DSA:3.40.192.10 4 119 1.1E-26 T 22-04-2016 HMPREF9228_RS04200 9039633f95af6297a3343170f5b07e60 326 PANTHER PTHR21089 5 312 3.9E-40 T 22-04-2016 HMPREF9228_RS04200 9039633f95af6297a3343170f5b07e60 326 SUPERFAMILY SSF51735 137 296 7.27E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04200 9039633f95af6297a3343170f5b07e60 326 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 89 3.0E-15 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04200 9039633f95af6297a3343170f5b07e60 326 Gene3D G3DSA:3.40.50.720 120 291 3.9E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04200 9039633f95af6297a3343170f5b07e60 326 PANTHER PTHR21089:SF1 5 312 3.9E-40 T 22-04-2016 HMPREF9228_RS03115 0530b0e29db26a42874b1e03d0d70f0d 431 Pfam PF02447 GntP family permease 12 428 3.8E-26 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 HMPREF9228_RS03115 0530b0e29db26a42874b1e03d0d70f0d 431 PANTHER PTHR30354 3 431 2.5E-62 T 22-04-2016 HMPREF9228_RS03905 ec82685108109b079f8d02c4cfc24355 289 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 32 284 30.634 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 HMPREF9228_RS03905 ec82685108109b079f8d02c4cfc24355 289 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 26 261 1.1E-65 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 HMPREF9228_RS03905 ec82685108109b079f8d02c4cfc24355 289 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 66 79 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 HMPREF9228_RS03905 ec82685108109b079f8d02c4cfc24355 289 Pfam PF00290 Tryptophan synthase alpha chain 26 266 7.3E-71 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 HMPREF9228_RS03905 ec82685108109b079f8d02c4cfc24355 289 Gene3D G3DSA:3.20.20.70 24 287 5.4E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS03905 ec82685108109b079f8d02c4cfc24355 289 SUPERFAMILY SSF51366 22 266 2.67E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 SUPERFAMILY SSF51735 6 256 1.48E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PANTHER PTHR24321 5 257 3.2E-35 T 22-04-2016 HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 6.6E-50 T 22-04-2016 HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PANTHER PTHR24321:SF6 5 257 3.2E-35 T 22-04-2016 HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS08790 8be9008eea543b4d4a4dcfbf43de6c1c 263 Gene3D G3DSA:3.40.50.720 2 256 1.8E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 SUPERFAMILY SSF48557 4 453 7.23E-88 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 Pfam PF00206 Lyase 17 326 9.0E-46 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 9.5E-14 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 PRINTS PR00149 Fumarate lyase superfamily signature 310 326 9.5E-14 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 9.5E-14 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 PRINTS PR00149 Fumarate lyase superfamily signature 267 294 9.5E-14 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 PANTHER PTHR11444:SF17 7 474 1.8E-153 T 22-04-2016 HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 PANTHER PTHR11444 7 474 1.8E-153 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 Gene3D G3DSA:1.20.200.10 135 404 4.2E-77 T 22-04-2016 HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 ProSitePatterns PS00163 Fumarate lyases signature. 310 319 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 Pfam PF08328 Adenylosuccinate lyase C-terminal 347 467 1.2E-41 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 Gene3D G3DSA:1.10.275.10 5 134 9.5E-34 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal HMPREF9228_RS02385 402b89dc31df2f3510a18c79eb54137a 478 Gene3D G3DSA:1.10.40.30 405 467 8.0E-25 T 22-04-2016 HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 Pfam PF08544 GHMP kinases C terminal 236 293 6.2E-9 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 SUPERFAMILY SSF55060 213 293 2.53E-14 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 Pfam PF00288 GHMP kinases N terminal domain 118 175 1.1E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 PANTHER PTHR20861:SF2 7 292 3.2E-46 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 24 303 25.729 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 PANTHER PTHR20861 7 292 3.2E-46 T 22-04-2016 HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 PIRSF PIRSF010376 22 310 1.1E-61 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 Gene3D G3DSA:3.30.70.890 236 294 6.0E-11 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 Gene3D G3DSA:3.30.230.10 25 189 2.3E-40 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS09705 962b73720a76e2885a011f041c8cc659 315 SUPERFAMILY SSF54211 24 187 1.67E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 PANTHER PTHR30239 13 175 1.2E-76 T 22-04-2016 HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 Pfam PF10369 Small subunit of acetolactate synthase 96 169 4.0E-29 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 Gene3D G3DSA:3.30.70.1150 95 174 3.1E-30 T 22-04-2016 HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 11 88 4.0E-37 T 22-04-2016 HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 Pfam PF01842 ACT domain 15 80 7.1E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 SUPERFAMILY SSF55021 91 172 1.32E-26 T 22-04-2016 HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 14 170 9.9E-59 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 SUPERFAMILY SSF55021 14 87 2.06E-21 T 22-04-2016 HMPREF9228_RS01945 438109c9d8891763ba79f443274526cf 185 Gene3D G3DSA:3.30.70.260 13 89 2.1E-31 T 22-04-2016 HMPREF9228_RS09015 5a9b9b25a276c8c292f27ac7cfb66797 366 PANTHER PTHR32196:SF39 26 338 2.5E-57 T 22-04-2016 HMPREF9228_RS09015 5a9b9b25a276c8c292f27ac7cfb66797 366 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 330 2.3E-28 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS09015 5a9b9b25a276c8c292f27ac7cfb66797 366 PANTHER PTHR32196 26 338 2.5E-57 T 22-04-2016 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 7.9E-66 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 677 885 4.3E-36 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Pfam PF02142 MGS-like domain 987 1087 8.5E-14 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Gene3D G3DSA:3.30.470.20 762 961 1.1E-62 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Gene3D G3DSA:3.30.470.20 200 398 1.0E-72 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Gene3D G3DSA:3.40.50.20 539 665 1.0E-54 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 547 1.4E-34 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Gene3D G3DSA:3.40.50.1380 966 1119 2.5E-35 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Gene3D G3DSA:1.10.1030.10 399 538 1.9E-42 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 SMART SM01096 423 547 5.7E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Gene3D G3DSA:3.30.1490.20 143 199 1.9E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Gene3D G3DSA:3.30.1490.20 690 761 1.8E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1108 12.557 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 SUPERFAMILY SSF52335 969 1117 3.27E-27 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 850 857 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PANTHER PTHR11405:SF5 1 1114 0.0 T 22-04-2016 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 SUPERFAMILY SSF52440 557 678 6.76E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PANTHER PTHR11405 1 1114 0.0 T 22-04-2016 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1096 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 SUPERFAMILY SSF48108 396 553 7.19E-42 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 SMART SM00851 983 1087 2.0E-17 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 SUPERFAMILY SSF52440 1 127 4.03E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 SUPERFAMILY SSF56059 128 400 1.11E-103 T 22-04-2016 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 712 726 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 7.6E-59 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 7.6E-59 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 7.6E-59 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 7.6E-59 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 7.6E-59 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 7.6E-59 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 7.6E-59 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 Gene3D G3DSA:3.40.50.20 3 108 2.2E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS05970 52dcee6d2ab133fe6d855e45f57330ae 1127 SUPERFAMILY SSF56059 676 960 2.65E-88 T 22-04-2016 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 Gene3D G3DSA:1.20.58.410 12 92 7.9E-17 T 22-04-2016 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 362 35.489 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 SUPERFAMILY SSF75620 13 358 2.09E-119 T 22-04-2016 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 Pfam PF00472 RF-1 domain 217 326 4.8E-38 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 SMART SM00937 67 182 1.6E-45 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 11 360 6.7E-136 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 Pfam PF03462 PCRF domain 14 207 2.2E-62 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 PANTHER PTHR11075 14 361 9.1E-144 T 22-04-2016 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 PANTHER PTHR11075:SF9 14 361 9.1E-144 T 22-04-2016 HMPREF9228_RS07390 ade0b6e8c515235c0e702c347c90cd2f 362 Gene3D G3DSA:3.30.160.20 216 294 4.8E-31 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain HMPREF9228_RS03740 34f1ee93aafe9891c48d6a9ad0953340 183 Pfam PF01765 Ribosome recycling factor 19 181 1.9E-56 T 22-04-2016 IPR023584 Ribosome recycling factor domain HMPREF9228_RS03740 34f1ee93aafe9891c48d6a9ad0953340 183 PANTHER PTHR20982 3 183 6.5E-72 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 HMPREF9228_RS03740 34f1ee93aafe9891c48d6a9ad0953340 183 Gene3D G3DSA:1.10.132.20 64 183 4.0E-37 T 22-04-2016 IPR023584 Ribosome recycling factor domain HMPREF9228_RS03740 34f1ee93aafe9891c48d6a9ad0953340 183 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 183 25.974 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 HMPREF9228_RS03740 34f1ee93aafe9891c48d6a9ad0953340 183 TIGRFAM TIGR00496 frr: ribosome recycling factor 8 183 1.6E-61 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 HMPREF9228_RS03740 34f1ee93aafe9891c48d6a9ad0953340 183 SUPERFAMILY SSF55194 4 182 9.55E-65 T 22-04-2016 IPR023584 Ribosome recycling factor domain HMPREF9228_RS01575 8a0e33758198345a82f03341f52e6b98 278 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 233 252 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 HMPREF9228_RS01575 8a0e33758198345a82f03341f52e6b98 278 PANTHER PTHR11910 121 275 2.5E-18 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 HMPREF9228_RS01575 8a0e33758198345a82f03341f52e6b98 278 PRINTS PR00125 ATP synthase delta subunit signature 231 246 3.5E-7 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 HMPREF9228_RS01575 8a0e33758198345a82f03341f52e6b98 278 PRINTS PR00125 ATP synthase delta subunit signature 246 264 3.5E-7 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 HMPREF9228_RS01575 8a0e33758198345a82f03341f52e6b98 278 PANTHER PTHR11910:SF1 121 275 2.5E-18 T 22-04-2016 HMPREF9228_RS01575 8a0e33758198345a82f03341f52e6b98 278 Hamap MF_01416 ATP synthase subunit delta [atpD]. 82 273 13.192 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 HMPREF9228_RS01575 8a0e33758198345a82f03341f52e6b98 278 Pfam PF00213 ATP synthase delta (OSCP) subunit 107 270 7.2E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 SMART SM00859 5 137 3.8E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 170 333 1.1E-9 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 SUPERFAMILY SSF55347 157 331 6.54E-36 T 22-04-2016 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 PANTHER PTHR32338 1 364 5.7E-111 T 22-04-2016 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 5 364 2.1E-93 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 130 5.4E-26 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 Gene3D G3DSA:3.30.360.10 166 332 2.3E-46 T 22-04-2016 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 Gene3D G3DSA:3.40.50.720 2 165 4.0E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 152 168 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 SUPERFAMILY SSF51735 3 182 6.21E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05720 48193348c5ad64a0d01180f8f5d456af 364 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 4 358 35.651 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS06040 a9b7505fd62e27bf713101a8961c3318 230 SUPERFAMILY SSF48150 19 214 6.91E-38 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS06040 a9b7505fd62e27bf713101a8961c3318 230 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 169 8.1E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 HMPREF9228_RS06040 a9b7505fd62e27bf713101a8961c3318 230 SMART SM00478 52 213 7.7E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 HMPREF9228_RS06040 a9b7505fd62e27bf713101a8961c3318 230 PANTHER PTHR10359:SF17 33 214 1.9E-47 T 22-04-2016 HMPREF9228_RS06040 a9b7505fd62e27bf713101a8961c3318 230 Gene3D G3DSA:1.10.1670.10 143 215 3.3E-8 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal HMPREF9228_RS06040 a9b7505fd62e27bf713101a8961c3318 230 PANTHER PTHR10359 33 214 1.9E-47 T 22-04-2016 HMPREF9228_RS06040 a9b7505fd62e27bf713101a8961c3318 230 Gene3D G3DSA:1.10.340.30 36 142 1.3E-30 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS06040 a9b7505fd62e27bf713101a8961c3318 230 PIRSF PIRSF001435 18 219 5.9E-44 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 Gene3D G3DSA:3.30.70.260 345 411 2.3E-5 T 22-04-2016 HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 SUPERFAMILY SSF53686 19 326 1.96E-91 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 Gene3D G3DSA:3.40.50.1100 81 339 2.9E-73 T 22-04-2016 HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 PANTHER PTHR10314 21 373 1.4E-138 T 22-04-2016 HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 32 416 8.9E-131 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 28 303 1.4E-79 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 SUPERFAMILY SSF55021 347 412 4.58E-6 T 22-04-2016 HMPREF9228_RS09425 ba8794f7b62cc913c3c96f05a23a663e 421 PANTHER PTHR10314:SF17 21 373 1.4E-138 T 22-04-2016 HMPREF9228_RS01825 a96ed131c85af81a3f46ee38392342db 195 Gene3D G3DSA:1.20.1440.20 21 195 3.6E-67 T 22-04-2016 IPR023353 LemA-like domain HMPREF9228_RS01825 a96ed131c85af81a3f46ee38392342db 195 PANTHER PTHR34478:SF2 5 195 5.0E-78 T 22-04-2016 HMPREF9228_RS01825 a96ed131c85af81a3f46ee38392342db 195 PANTHER PTHR34478 5 195 5.0E-78 T 22-04-2016 HMPREF9228_RS01825 a96ed131c85af81a3f46ee38392342db 195 Pfam PF04011 LemA family 14 195 1.2E-72 T 22-04-2016 IPR007156 LemA HMPREF9228_RS01825 a96ed131c85af81a3f46ee38392342db 195 SUPERFAMILY SSF140478 32 185 1.44E-54 T 22-04-2016 IPR023353 LemA-like domain HMPREF9228_RS01965 6d87483f8ee67fd6fb8408a65d1e91f3 206 PANTHER PTHR34374 7 206 9.3E-31 T 22-04-2016 HMPREF9228_RS01965 6d87483f8ee67fd6fb8408a65d1e91f3 206 Pfam PF02620 Uncharacterized ACR, COG1399 65 197 2.0E-33 T 22-04-2016 IPR003772 Protein of unknown function DUF177 HMPREF9228_RS07245 9b215b7aa3442412b0406ecab2551e41 142 PANTHER PTHR15364:SF2 1 96 2.1E-15 T 22-04-2016 HMPREF9228_RS07245 9b215b7aa3442412b0406ecab2551e41 142 PANTHER PTHR15364 1 96 2.1E-15 T 22-04-2016 HMPREF9228_RS07245 9b215b7aa3442412b0406ecab2551e41 142 Gene3D G3DSA:3.40.50.1810 4 128 1.2E-35 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 HMPREF9228_RS07245 9b215b7aa3442412b0406ecab2551e41 142 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 10 108 1.9E-19 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 HMPREF9228_RS07245 9b215b7aa3442412b0406ecab2551e41 142 SUPERFAMILY SSF52309 5 130 3.66E-32 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031 291 388 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031 405 597 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031 665 770 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031 18 51 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031 794 844 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 SMART SM00487 371 564 6.9E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 Gene3D G3DSA:3.40.50.300 362 558 9.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 Gene3D G3DSA:2.40.50.140 48 149 1.2E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 SUPERFAMILY SSF50249 17 147 6.51E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 Pfam PF00270 DEAD/DEAH box helicase 397 538 1.4E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 SUPERFAMILY SSF52540 281 557 3.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 Pfam PF00271 Helicase conserved C-terminal domain 676 757 2.1E-16 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 Gene3D G3DSA:3.40.50.300 668 805 2.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 Gene3D G3DSA:3.40.50.300 559 600 2.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031:SF249 291 388 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031:SF249 405 597 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031:SF249 665 770 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031:SF249 18 51 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 PANTHER PTHR24031:SF249 794 844 2.7E-82 T 22-04-2016 HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 SMART SM00490 671 757 2.5E-19 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 SUPERFAMILY SSF52540 668 765 4.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08590 f20c7218cd081dc3a9adb9c482d0fcd4 868 SUPERFAMILY SSF52540 496 600 4.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 Gene3D G3DSA:3.40.50.1770 207 373 5.2E-23 T 22-04-2016 HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 PANTHER PTHR10160 12 358 2.1E-102 T 22-04-2016 HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 SUPERFAMILY SSF52283 9 189 4.42E-40 T 22-04-2016 HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 SMART SM01002 156 322 3.1E-61 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 SMART SM01003 12 147 1.3E-40 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 151 359 3.2E-50 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 Gene3D G3DSA:3.50.50.60 184 206 2.5E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 12 146 1.1E-31 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 Gene3D G3DSA:3.40.50.1770 11 183 5.8E-45 T 22-04-2016 HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 SUPERFAMILY SSF51735 148 322 6.13E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04525 4f4af84b985f3aca5f4061bd3a9b0485 387 PANTHER PTHR10160:SF19 12 358 2.1E-102 T 22-04-2016 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 Gene3D G3DSA:2.40.50.140 113 189 2.5E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 SUPERFAMILY SSF50249 123 201 1.51E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 Pfam PF00575 S1 RNA binding domain 122 188 1.7E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 Pfam PF00575 S1 RNA binding domain 206 277 6.6E-26 T 22-04-2016 IPR003029 S1 domain GO:0003676 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 Pfam PF00575 S1 RNA binding domain 35 105 1.2E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 Pfam PF00575 S1 RNA binding domain 293 363 4.8E-23 T 22-04-2016 IPR003029 S1 domain GO:0003676 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 SMART SM00316 34 105 1.2E-14 T 22-04-2016 IPR022967 RNA-binding domain, S1 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 SMART SM00316 121 188 3.1E-11 T 22-04-2016 IPR022967 RNA-binding domain, S1 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 SMART SM00316 292 363 3.5E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 SMART SM00316 207 277 7.7E-29 T 22-04-2016 IPR022967 RNA-binding domain, S1 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PANTHER PTHR10724:SF6 19 365 1.1E-115 T 22-04-2016 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 SUPERFAMILY SSF50249 206 289 2.21E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PANTHER PTHR10724 19 365 1.1E-115 T 22-04-2016 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 172 192 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 126 142 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 54 68 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 143 160 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 346 364 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 36 54 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 229 250 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 307 326 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 PRINTS PR00681 Ribosomal protein S1 signature 102 121 8.7E-84 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 SUPERFAMILY SSF50249 277 365 9.7E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 Gene3D G3DSA:2.40.50.140 209 283 1.8E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 SUPERFAMILY SSF50249 28 130 9.29E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 Gene3D G3DSA:2.40.50.140 284 365 3.1E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05340 e4cd588d0fd60784ef406e6bee71f929 491 Gene3D G3DSA:2.40.50.140 19 108 1.6E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS07140 06fb050181f61ecc3e5be7e63bb66e88 195 PANTHER PTHR30055 2 170 6.5E-14 T 22-04-2016 HMPREF9228_RS07140 06fb050181f61ecc3e5be7e63bb66e88 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.9E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS07140 06fb050181f61ecc3e5be7e63bb66e88 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.9E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS07140 06fb050181f61ecc3e5be7e63bb66e88 195 Gene3D G3DSA:1.10.357.10 4 173 7.9E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS07140 06fb050181f61ecc3e5be7e63bb66e88 195 SUPERFAMILY SSF46689 6 79 9.75E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS07140 06fb050181f61ecc3e5be7e63bb66e88 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 5.4E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01725 aef4e6c1c689c4cdbc448a2c1f6de565 324 SUPERFAMILY SSF161098 46 323 2.34E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01725 aef4e6c1c689c4cdbc448a2c1f6de565 324 Gene3D G3DSA:1.10.3720.10 43 311 5.2E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01725 aef4e6c1c689c4cdbc448a2c1f6de565 324 PANTHER PTHR32243:SF28 38 324 6.7E-109 T 22-04-2016 HMPREF9228_RS01725 aef4e6c1c689c4cdbc448a2c1f6de565 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 314 1.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01725 aef4e6c1c689c4cdbc448a2c1f6de565 324 PANTHER PTHR32243 38 324 6.7E-109 T 22-04-2016 HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 Gene3D G3DSA:2.60.120.200 165 281 1.0E-5 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 SUPERFAMILY SSF50939 318 430 1.21E-72 T 22-04-2016 IPR011040 Sialidases HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 SUPERFAMILY SSF50939 499 756 1.21E-72 T 22-04-2016 IPR011040 Sialidases HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 Gene3D G3DSA:2.120.10.10 498 756 8.0E-81 T 22-04-2016 IPR011040 Sialidases HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 Gene3D G3DSA:2.120.10.10 317 425 8.0E-81 T 22-04-2016 IPR011040 Sialidases HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 PANTHER PTHR10628 480 755 7.1E-52 T 22-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 PANTHER PTHR10628 312 413 7.1E-52 T 22-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 PANTHER PTHR10628:SF5 480 755 7.1E-52 T 22-04-2016 HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 PANTHER PTHR10628:SF5 312 413 7.1E-52 T 22-04-2016 HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 Pfam PF13088 BNR repeat-like domain 500 715 4.5E-18 T 22-04-2016 IPR011040 Sialidases HMPREF9228_RS00875 c7930dd981f09af291702a432fc8032c 763 SUPERFAMILY SSF49899 172 316 4.19E-8 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 PANTHER PTHR10314 376 439 1.4E-117 T 22-04-2016 HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 PANTHER PTHR10314:SF1 54 344 1.4E-117 T 22-04-2016 HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 PANTHER PTHR10314:SF1 27 38 1.4E-117 T 22-04-2016 HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 Gene3D G3DSA:3.90.1380.10 4 84 2.0E-18 T 22-04-2016 IPR029144 Threonine synthase, N-terminal HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 PANTHER PTHR10314 54 344 1.4E-117 T 22-04-2016 HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 PANTHER PTHR10314 27 38 1.4E-117 T 22-04-2016 HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 Gene3D G3DSA:3.40.50.1100 138 204 1.2E-10 T 22-04-2016 HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 Gene3D G3DSA:3.40.50.1100 205 443 1.8E-88 T 22-04-2016 HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 101 409 1.0E-13 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 SUPERFAMILY SSF53686 4 490 2.73E-133 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 Pfam PF14821 Threonine synthase N terminus 5 80 9.0E-14 T 22-04-2016 IPR029144 Threonine synthase, N-terminal HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 TIGRFAM TIGR00260 thrC: threonine synthase 99 441 2.1E-71 T 22-04-2016 IPR004450 Threonine synthase-like HMPREF9228_RS05540 2f47014b2d6e0c8ba27c598638ce74c7 496 PANTHER PTHR10314:SF1 376 439 1.4E-117 T 22-04-2016 HMPREF9228_RS09145 28480d52b4e55f3e84072af900da67ca 254 Gene3D G3DSA:1.10.3210.10 29 46 2.2E-13 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS09145 28480d52b4e55f3e84072af900da67ca 254 Gene3D G3DSA:1.10.3210.10 97 203 2.2E-13 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS09145 28480d52b4e55f3e84072af900da67ca 254 SMART SM00471 24 212 0.0077 T 22-04-2016 IPR003607 HD/PDEase domain HMPREF9228_RS09145 28480d52b4e55f3e84072af900da67ca 254 Pfam PF01966 HD domain 30 201 9.0E-9 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS09145 28480d52b4e55f3e84072af900da67ca 254 SUPERFAMILY SSF109604 99 201 9.77E-11 T 22-04-2016 HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 SUPERFAMILY SSF54373 268 341 1.79E-20 T 22-04-2016 HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 15 392 2.3E-102 T 22-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 Pfam PF13450 NAD(P)-binding Rossmann-like domain 18 87 9.1E-18 T 22-04-2016 HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 SUPERFAMILY SSF51971 14 288 1.12E-42 T 22-04-2016 HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 SUPERFAMILY SSF51971 359 389 1.12E-42 T 22-04-2016 HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 Gene3D G3DSA:3.40.50.720 349 393 8.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 Gene3D G3DSA:3.40.50.720 12 93 8.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 Gene3D G3DSA:3.40.50.720 197 277 8.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 Pfam PF03275 UDP-galactopyranose mutase 162 374 3.8E-78 T 22-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 HMPREF9228_RS09005 ad7571bfa906d0c04733811295402db5 398 PANTHER PTHR21197 1 390 9.6E-95 T 22-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 Pfam PF00294 pfkB family carbohydrate kinase 4 286 1.1E-37 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 SUPERFAMILY SSF53613 1 292 1.11E-62 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 PRINTS PR00990 Ribokinase signature 32 51 2.9E-20 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 PRINTS PR00990 Ribokinase signature 169 184 2.9E-20 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 PRINTS PR00990 Ribokinase signature 102 115 2.9E-20 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 PRINTS PR00990 Ribokinase signature 5 26 2.9E-20 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 PRINTS PR00990 Ribokinase signature 210 221 2.9E-20 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 Gene3D G3DSA:3.40.1190.20 1 293 3.3E-70 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 PANTHER PTHR10584 1 291 1.1E-60 T 22-04-2016 HMPREF9228_RS07065 2181634330956f9dfa7189418c25418d 300 PANTHER PTHR10584:SF166 1 291 1.1E-60 T 22-04-2016 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 663 8.5E-225 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 798 48.696 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 SMART SM00436 115 203 7.1E-43 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PANTHER PTHR11390:SF27 257 467 5.8E-258 T 22-04-2016 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PANTHER PTHR11390:SF27 488 660 5.8E-258 T 22-04-2016 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PANTHER PTHR11390:SF27 1 238 5.8E-258 T 22-04-2016 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 529 543 1.5E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 1.5E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 89 102 1.5E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 173 191 1.5E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 400 416 1.5E-33 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Pfam PF13368 Topoisomerase C-terminal repeat 872 924 1.5E-16 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Pfam PF13368 Topoisomerase C-terminal repeat 650 694 1.7E-5 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Pfam PF13368 Topoisomerase C-terminal repeat 708 789 3.8E-13 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Pfam PF13368 Topoisomerase C-terminal repeat 804 855 1.0E-9 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Gene3D G3DSA:1.10.460.10 146 193 3.1E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Gene3D G3DSA:1.10.460.10 513 607 3.1E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Pfam PF01131 DNA topoisomerase 140 603 2.2E-115 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PANTHER PTHR11390 257 467 5.8E-258 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PANTHER PTHR11390 488 660 5.8E-258 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 PANTHER PTHR11390 1 238 5.8E-258 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 SMART SM00493 3 115 3.5E-28 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Gene3D G3DSA:2.70.20.10 195 343 4.9E-24 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Gene3D G3DSA:2.70.20.10 349 512 3.7E-24 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 SMART SM00437 279 566 2.5E-107 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Pfam PF01751 Toprim domain 5 124 1.4E-26 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Gene3D G3DSA:3.40.50.140 1 145 2.1E-45 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 SUPERFAMILY SSF56712 3 607 2.75E-171 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain HMPREF9228_RS00910 dc49e3a28572c1b7d9728f4af3858bf4 1016 Gene3D G3DSA:1.10.10.10 965 997 8.4E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 SUPERFAMILY SSF47648 5 72 3.4E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 SUPERFAMILY SSF52418 78 344 7.46E-69 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 Gene3D G3DSA:3.40.1030.10 76 344 4.1E-88 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 PANTHER PTHR11922 80 342 2.6E-82 T 22-04-2016 HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 PANTHER PTHR11922:SF5 80 342 2.6E-82 T 22-04-2016 HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 69 2.8E-12 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 Pfam PF00591 Glycosyl transferase family, a/b domain 77 333 6.4E-69 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 Gene3D G3DSA:1.20.970.10 5 70 1.7E-19 T 22-04-2016 HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 11 342 6.1E-93 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 HMPREF9228_RS03370 eb19e3759c4b3b4b8ce6a55183f45e54 348 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 8 343 29.874 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 HMPREF9228_RS03085 049dde6da0ee1180b399fda284f7ae6a 241 PANTHER PTHR41299:SF1 3 214 1.4E-16 T 22-04-2016 HMPREF9228_RS03085 049dde6da0ee1180b399fda284f7ae6a 241 PANTHER PTHR41299 3 214 1.4E-16 T 22-04-2016 HMPREF9228_RS03085 049dde6da0ee1180b399fda284f7ae6a 241 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 5 207 4.1E-32 T 22-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 HMPREF9228_RS03085 049dde6da0ee1180b399fda284f7ae6a 241 Gene3D G3DSA:3.40.50.10240 4 105 2.0E-18 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 HMPREF9228_RS03085 049dde6da0ee1180b399fda284f7ae6a 241 SUPERFAMILY SSF63999 3 118 1.22E-23 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 HMPREF9228_RS03085 049dde6da0ee1180b399fda284f7ae6a 241 Gene3D G3DSA:2.60.120.320 106 203 8.7E-4 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 HMPREF9228_RS03085 049dde6da0ee1180b399fda284f7ae6a 241 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 24 113 1.6E-12 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 HMPREF9228_RS03085 049dde6da0ee1180b399fda284f7ae6a 241 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 148 204 3.1E-5 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 HMPREF9228_RS00955 389ae4dcdbf7440cca9366fc61566b30 505 Gene3D G3DSA:3.30.1510.10 116 212 2.4E-11 T 22-04-2016 HMPREF9228_RS00955 389ae4dcdbf7440cca9366fc61566b30 505 SUPERFAMILY SSF52540 3 500 6.5E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00955 389ae4dcdbf7440cca9366fc61566b30 505 Gene3D G3DSA:3.40.50.300 224 391 2.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00955 389ae4dcdbf7440cca9366fc61566b30 505 Gene3D G3DSA:3.40.50.300 6 114 2.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00955 389ae4dcdbf7440cca9366fc61566b30 505 PANTHER PTHR10025:SF40 34 500 2.6E-45 T 22-04-2016 HMPREF9228_RS00955 389ae4dcdbf7440cca9366fc61566b30 505 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 89 99 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 HMPREF9228_RS00955 389ae4dcdbf7440cca9366fc61566b30 505 PANTHER PTHR10025 34 500 2.6E-45 T 22-04-2016 HMPREF9228_RS00955 389ae4dcdbf7440cca9366fc61566b30 505 Pfam PF01268 Formate--tetrahydrofolate ligase 31 306 7.4E-64 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 Gene3D G3DSA:1.10.10.250 74 141 1.8E-31 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 Gene3D G3DSA:3.30.1550.10 4 73 4.6E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 PANTHER PTHR11661:SF7 5 141 3.3E-72 T 22-04-2016 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 SUPERFAMILY SSF54747 4 86 9.68E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 PANTHER PTHR11661 5 141 3.3E-72 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 SUPERFAMILY SSF46906 69 141 5.89E-26 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 143 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 68 4.8E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 143 2.7E-64 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 1.3E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 7 143 31.023 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 74 6.0E-16 T 22-04-2016 HMPREF9228_RS08705 b55a9aa690ba8804d74e3dbc703109f7 143 SMART SM00649 11 142 5.7E-82 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 Pfam PF12833 Helix-turn-helix domain 223 300 2.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 PANTHER PTHR11019 36 157 6.0E-42 T 22-04-2016 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 PANTHER PTHR11019 175 307 6.0E-42 T 22-04-2016 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 SUPERFAMILY SSF51182 39 93 2.14E-10 T 22-04-2016 IPR011051 RmlC-like cupin domain HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 Gene3D G3DSA:1.10.10.60 253 304 3.2E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 Pfam PF02311 AraC-like ligand binding domain 37 169 1.6E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 Gene3D G3DSA:1.10.10.60 196 252 3.8E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 PANTHER PTHR11019:SF123 36 157 6.0E-42 T 22-04-2016 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 PANTHER PTHR11019:SF123 175 307 6.0E-42 T 22-04-2016 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 SUPERFAMILY SSF46689 200 250 1.47E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 Gene3D G3DSA:2.60.120.280 40 126 1.3E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 SMART SM00342 216 299 8.8E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS08220 6a00461b5ac0c2937c176946cd93dba1 315 SUPERFAMILY SSF46689 252 303 6.57E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS05635 dbd41cb31a2d81de7a312a79d56de10a 130 Gene3D G3DSA:3.40.250.10 15 112 4.8E-23 T 22-04-2016 IPR001763 Rhodanese-like domain HMPREF9228_RS05635 dbd41cb31a2d81de7a312a79d56de10a 130 SUPERFAMILY SSF52821 18 111 7.6E-25 T 22-04-2016 IPR001763 Rhodanese-like domain HMPREF9228_RS05635 dbd41cb31a2d81de7a312a79d56de10a 130 SMART SM00450 22 115 3.3E-13 T 22-04-2016 IPR001763 Rhodanese-like domain HMPREF9228_RS05635 dbd41cb31a2d81de7a312a79d56de10a 130 Pfam PF00581 Rhodanese-like domain 24 109 8.3E-11 T 22-04-2016 IPR001763 Rhodanese-like domain HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 Gene3D G3DSA:3.30.460.10 197 345 3.6E-47 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 PANTHER PTHR21262:SF0 2 363 0.0 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 PANTHER PTHR21262:SF0 380 761 0.0 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 Pfam PF13291 ACT domain 682 758 6.3E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 SUPERFAMILY SSF81301 200 430 8.99E-62 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 48 758 1.7E-237 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 Pfam PF13328 HD domain 49 195 9.5E-43 T 22-04-2016 IPR003607 HD/PDEase domain HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 SUPERFAMILY SSF109604 27 210 1.26E-61 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 SMART SM00954 255 365 7.0E-65 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 Gene3D G3DSA:3.30.70.260 684 756 1.1E-13 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 Pfam PF02824 TGS domain 426 485 9.3E-23 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 PANTHER PTHR21262 2 363 0.0 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 PANTHER PTHR21262 380 761 0.0 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 SUPERFAMILY SSF55021 684 760 1.5E-13 T 22-04-2016 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 SMART SM00471 63 173 5.9E-11 T 22-04-2016 IPR003607 HD/PDEase domain HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 SUPERFAMILY SSF81271 416 485 5.89E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 Pfam PF04607 Region found in RelA / SpoT proteins 255 365 2.5E-37 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 HMPREF9228_RS03460 e1b0460f508fc8c32fb9fb623ecf3b20 774 Gene3D G3DSA:3.10.20.30 425 488 1.3E-24 T 22-04-2016 IPR012675 Beta-grasp domain HMPREF9228_RS05190 3b3b48c86f9e930633bf7d8970d3290a 233 PANTHER PTHR23029:SF1 9 183 6.9E-38 T 22-04-2016 HMPREF9228_RS05190 3b3b48c86f9e930633bf7d8970d3290a 233 PANTHER PTHR23029 9 183 6.9E-38 T 22-04-2016 HMPREF9228_RS05190 3b3b48c86f9e930633bf7d8970d3290a 233 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 203 3.1E-40 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS05190 3b3b48c86f9e930633bf7d8970d3290a 233 SMART SM00855 8 172 8.3E-18 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS05190 3b3b48c86f9e930633bf7d8970d3290a 233 SUPERFAMILY SSF53254 7 221 2.08E-41 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS05190 3b3b48c86f9e930633bf7d8970d3290a 233 Gene3D G3DSA:3.40.50.1240 7 230 1.1E-53 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS03935 fb3acc87f36df5e7475738e92b4f61b2 325 Pfam PF05949 Bacterial protein of unknown function (DUF881) 170 321 5.7E-35 T 22-04-2016 IPR010273 Protein of unknown function DUF881 HMPREF9228_RS03935 fb3acc87f36df5e7475738e92b4f61b2 325 PANTHER PTHR37313 31 325 1.2E-24 T 22-04-2016 HMPREF9228_RS03565 a35168bcf826c4334b9deb08be30a41b 423 Gene3D G3DSA:3.40.50.150 84 177 4.8E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS03565 a35168bcf826c4334b9deb08be30a41b 423 SUPERFAMILY SSF53335 58 217 2.06E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 152 282 1.1E-34 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 365 480 4.6E-7 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 153 282 3.0E-31 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 Gene3D G3DSA:3.30.70.560 362 498 3.8E-18 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 Gene3D G3DSA:3.30.70.560 151 305 6.1E-47 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 4.6E-30 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 6.8E-32 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 SMART SM00905 4 117 3.5E-45 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 PANTHER PTHR20941 126 317 1.3E-50 T 22-04-2016 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 SUPERFAMILY SSF55620 2 119 4.23E-35 T 22-04-2016 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 SUPERFAMILY SSF55083 149 302 2.35E-44 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 Gene3D G3DSA:3.30.1130.10 1 119 1.3E-40 T 22-04-2016 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 Pfam PF02152 Dihydroneopterin aldolase 4 116 4.2E-31 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07470 dc2d291813aae540b7758bdea08eb2fc 514 SUPERFAMILY SSF55083 362 500 5.49E-20 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 HMPREF9228_RS07415 a11cccacf9bbd5728724f604fbf6638b 139 PRINTS PR01576 Peptide deformylase signature 30 59 1.47E-9 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS07415 a11cccacf9bbd5728724f604fbf6638b 139 PRINTS PR01576 Peptide deformylase signature 86 97 1.47E-9 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS07415 a11cccacf9bbd5728724f604fbf6638b 139 PRINTS PR01576 Peptide deformylase signature 116 139 1.47E-9 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS07415 a11cccacf9bbd5728724f604fbf6638b 139 Gene3D G3DSA:3.90.45.10 8 138 3.3E-34 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS07415 a11cccacf9bbd5728724f604fbf6638b 139 PIRSF PIRSF004749 1 139 1.1E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS07415 a11cccacf9bbd5728724f604fbf6638b 139 SUPERFAMILY SSF56420 8 139 9.16E-35 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS07415 a11cccacf9bbd5728724f604fbf6638b 139 Pfam PF01327 Polypeptide deformylase 10 139 7.5E-26 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS07415 a11cccacf9bbd5728724f604fbf6638b 139 PANTHER PTHR10458 12 139 6.7E-24 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS06565 034387f350682a559aa533b620da6a40 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 16 391 7.5E-140 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS06565 034387f350682a559aa533b620da6a40 394 SUPERFAMILY SSF53383 17 393 9.88E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS06565 034387f350682a559aa533b620da6a40 394 Gene3D G3DSA:3.40.640.10 14 257 8.9E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS06565 034387f350682a559aa533b620da6a40 394 PANTHER PTHR11808 15 394 2.2E-187 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS06565 034387f350682a559aa533b620da6a40 394 Gene3D G3DSA:3.90.1150.10 259 393 1.9E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS06565 034387f350682a559aa533b620da6a40 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS06565 034387f350682a559aa533b620da6a40 394 PANTHER PTHR11808:SF57 15 394 2.2E-187 T 22-04-2016 HMPREF9228_RS06565 034387f350682a559aa533b620da6a40 394 PIRSF PIRSF001434 1 394 1.6E-137 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Gene3D G3DSA:3.40.50.1000 588 667 5.7E-36 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Gene3D G3DSA:3.40.50.1000 702 782 5.7E-36 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 SUPERFAMILY SSF81665 87 139 3.66E-10 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 SUPERFAMILY SSF81665 303 388 3.66E-10 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 619 629 1.7E-15 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 252 266 1.7E-15 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 737 749 1.7E-15 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 732 1.7E-15 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 394 408 1.7E-15 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 SUPERFAMILY SSF81653 216 302 7.72E-18 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Pfam PF00122 E1-E2 ATPase 107 385 2.1E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Pfam PF00702 haloacid dehalogenase-like hydrolase 393 661 1.0E-13 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 ProSitePatterns PS01229 Hypothetical cof family signature 2. 713 735 - T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Pfam PF08282 haloacid dehalogenase-like hydrolase 707 760 1.4E-4 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Gene3D G3DSA:1.20.1110.10 87 123 3.8E-4 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 396 402 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PANTHER PTHR24093 705 772 2.5E-85 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PANTHER PTHR24093 809 814 2.5E-85 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PANTHER PTHR24093 54 148 2.5E-85 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PANTHER PTHR24093 209 663 2.5E-85 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Gene3D G3DSA:3.40.1110.10 384 411 2.3E-4 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 216 415 7.7E-29 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Gene3D G3DSA:2.70.150.10 124 146 2.0E-17 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 Gene3D G3DSA:2.70.150.10 214 302 2.0E-17 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PANTHER PTHR24093:SF126 705 772 2.5E-85 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PANTHER PTHR24093:SF126 809 814 2.5E-85 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PANTHER PTHR24093:SF126 54 148 2.5E-85 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 PANTHER PTHR24093:SF126 209 663 2.5E-85 T 22-04-2016 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 SUPERFAMILY SSF81660 396 513 1.57E-6 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 SUPERFAMILY SSF56784 704 760 3.64E-26 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00435 ce49cf5126c4182591929944e5916299 821 SUPERFAMILY SSF56784 588 662 3.64E-26 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04950 64b414f395abdb43508d20eb632ae814 460 Pfam PF01554 MatE 28 192 3.1E-21 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS04950 64b414f395abdb43508d20eb632ae814 460 Pfam PF01554 MatE 275 417 1.5E-15 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS04950 64b414f395abdb43508d20eb632ae814 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 428 4.1E-45 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS04950 64b414f395abdb43508d20eb632ae814 460 PANTHER PTHR11206 13 458 3.2E-124 T 22-04-2016 HMPREF9228_RS04950 64b414f395abdb43508d20eb632ae814 460 PANTHER PTHR11206:SF132 13 458 3.2E-124 T 22-04-2016 HMPREF9228_RS04950 64b414f395abdb43508d20eb632ae814 460 PIRSF PIRSF006603 3 460 1.3E-78 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS01855 eb9f5bf2fa6bc76d4eb0a90bd024aa71 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 1.2E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS01855 eb9f5bf2fa6bc76d4eb0a90bd024aa71 328 Pfam PF13377 Periplasmic binding protein-like domain 168 327 1.7E-6 T 22-04-2016 HMPREF9228_RS01855 eb9f5bf2fa6bc76d4eb0a90bd024aa71 328 PANTHER PTHR30146 1 327 2.1E-45 T 22-04-2016 HMPREF9228_RS01855 eb9f5bf2fa6bc76d4eb0a90bd024aa71 328 SUPERFAMILY SSF47413 1 58 4.65E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS01855 eb9f5bf2fa6bc76d4eb0a90bd024aa71 328 Gene3D G3DSA:1.10.260.40 2 53 1.0E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS01855 eb9f5bf2fa6bc76d4eb0a90bd024aa71 328 SUPERFAMILY SSF53822 61 321 2.88E-19 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS01855 eb9f5bf2fa6bc76d4eb0a90bd024aa71 328 Gene3D G3DSA:3.40.50.2300 54 184 1.1E-25 T 22-04-2016 HMPREF9228_RS01855 eb9f5bf2fa6bc76d4eb0a90bd024aa71 328 SMART SM00354 1 71 1.6E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 PANTHER PTHR30175 13 517 2.0E-92 T 22-04-2016 HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 SMART SM00640 44 476 4.8E-103 T 22-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 Gene3D G3DSA:2.115.10.20 41 191 1.5E-15 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 PANTHER PTHR30175:SF0 13 517 2.0E-92 T 22-04-2016 HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 Gene3D G3DSA:2.115.10.20 192 312 1.3E-7 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 402 476 2.0E-14 T 22-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 SUPERFAMILY SSF75005 36 356 3.14E-91 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 Gene3D G3DSA:2.60.120.560 348 515 6.5E-31 T 22-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 44 353 6.1E-86 T 22-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal HMPREF9228_RS02640 d5cc7e5b77423802fbfaa154134f55b2 518 SUPERFAMILY SSF49899 355 515 1.74E-26 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 500 551 8.3E-9 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 SUPERFAMILY SSF53738 316 460 3.83E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 SUPERFAMILY SSF55957 448 557 3.84E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 Gene3D G3DSA:3.40.120.10 321 457 2.8E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 332 453 1.6E-26 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 Gene3D G3DSA:3.30.310.50 479 556 8.6E-28 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 39 186 1.8E-32 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 SUPERFAMILY SSF53738 215 327 2.0E-8 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 SUPERFAMILY SSF53738 25 241 5.42E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 Gene3D G3DSA:3.40.120.10 232 320 1.9E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 PANTHER PTHR22573 17 558 1.0E-228 T 22-04-2016 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 PANTHER PTHR22573:SF52 17 558 1.0E-228 T 22-04-2016 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 557 1.2E-244 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 216 326 5.9E-11 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 Gene3D G3DSA:3.40.120.10 28 231 1.9E-55 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS07970 536c856405b75d0f442279b8cdaa47b6 558 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 147 156 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 SUPERFAMILY SSF46785 22 86 7.72E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 ProSitePatterns PS01125 ROK family signature. 221 248 - T 22-04-2016 IPR000600 ROK family HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 PANTHER PTHR18964:SF123 71 318 4.7E-42 T 22-04-2016 HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 PANTHER PTHR18964 71 318 4.7E-42 T 22-04-2016 HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 Gene3D G3DSA:1.10.10.10 21 90 6.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 Pfam PF00480 ROK family 132 285 4.6E-30 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 Gene3D G3DSA:3.30.420.40 95 224 3.8E-22 T 22-04-2016 HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 Gene3D G3DSA:3.30.420.40 225 349 4.8E-25 T 22-04-2016 HMPREF9228_RS03000 0d9fbe59aa754f94e21174c947ceeca3 374 SUPERFAMILY SSF53067 96 370 2.42E-33 T 22-04-2016 HMPREF9228_RS02815 72c597e96c85f3ca746e4e2b03636279 107 ProSitePatterns PS00150 Acylphosphatase signature 1. 24 34 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 HMPREF9228_RS02815 72c597e96c85f3ca746e4e2b03636279 107 PRINTS PR00112 Acylphosphatase signature 40 65 1.0E-5 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 HMPREF9228_RS02815 72c597e96c85f3ca746e4e2b03636279 107 PRINTS PR00112 Acylphosphatase signature 19 34 1.0E-5 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 HMPREF9228_RS02815 72c597e96c85f3ca746e4e2b03636279 107 SUPERFAMILY SSF54975 16 97 1.74E-26 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 HMPREF9228_RS02815 72c597e96c85f3ca746e4e2b03636279 107 ProSitePatterns PS00151 Acylphosphatase signature 2. 48 64 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 HMPREF9228_RS02815 72c597e96c85f3ca746e4e2b03636279 107 PANTHER PTHR10029 13 90 1.5E-20 T 22-04-2016 HMPREF9228_RS02815 72c597e96c85f3ca746e4e2b03636279 107 Pfam PF00708 Acylphosphatase 19 104 6.0E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 HMPREF9228_RS02815 72c597e96c85f3ca746e4e2b03636279 107 Gene3D G3DSA:3.30.70.100 18 105 1.2E-28 T 22-04-2016 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 Gene3D G3DSA:3.40.190.10 117 183 3.2E-6 T 22-04-2016 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 2.7E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 Gene3D G3DSA:1.10.10.10 1 81 2.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 SUPERFAMILY SSF53850 95 297 4.89E-22 T 22-04-2016 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 Pfam PF03466 LysR substrate binding domain 119 295 2.7E-10 T 22-04-2016 IPR005119 LysR, substrate-binding HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 SUPERFAMILY SSF46785 1 84 2.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 PANTHER PTHR30346:SF0 1 300 4.2E-52 T 22-04-2016 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 PANTHER PTHR30346 1 300 4.2E-52 T 22-04-2016 HMPREF9228_RS04255 24de8f43ef2e54ce35b34641d7eec8af 307 Gene3D G3DSA:3.40.190.10 184 267 2.4E-8 T 22-04-2016 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 SUPERFAMILY SSF52172 8 141 3.27E-22 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 Gene3D G3DSA:1.10.10.10 129 227 1.6E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 166 221 2.9E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 Pfam PF00072 Response regulator receiver domain 11 123 7.2E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 SMART SM00448 9 123 1.4E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 PANTHER PTHR26402 9 221 6.2E-53 T 22-04-2016 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 181 208 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 PANTHER PTHR26402:SF151 9 221 6.2E-53 T 22-04-2016 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 SUPERFAMILY SSF46894 160 226 1.09E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 Gene3D G3DSA:3.40.50.2300 7 128 8.4E-24 T 22-04-2016 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 197 2.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 209 2.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 181 2.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS07910 349de32cb2a869fd54d789be23076fc5 227 SMART SM00421 164 221 7.1E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Pfam PF00679 Elongation factor G C-terminus 613 699 2.8E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Pfam PF03144 Elongation factor Tu domain 2 334 401 2.0E-14 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 SUPERFAMILY SSF54211 489 612 7.33E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 TIGRFAM TIGR00484 EF-G: translation elongation factor G 6 705 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Hamap MF_00054_B Elongation factor G [fusA]. 7 704 107.566 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 189 2.7E-36 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Pfam PF00009 Elongation factor Tu GTP binding domain 10 291 1.5E-66 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 SMART SM00838 613 700 7.8E-57 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Gene3D G3DSA:3.30.230.10 494 610 5.6E-43 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 SMART SM00889 490 611 3.0E-65 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Pfam PF03764 Elongation factor G, domain IV 489 611 4.4E-43 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Gene3D G3DSA:2.40.30.10 317 414 1.5E-32 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PANTHER PTHR23115:SF66 264 292 0.0 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PANTHER PTHR23115:SF66 313 704 0.0 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PANTHER PTHR23115:SF66 1 186 0.0 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PANTHER PTHR23115 264 292 0.0 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PANTHER PTHR23115 313 704 0.0 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PANTHER PTHR23115 1 186 0.0 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Gene3D G3DSA:3.30.70.870 415 490 1.0E-37 T 22-04-2016 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Pfam PF14492 Elongation Factor G, domain II 414 487 1.4E-32 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Gene3D G3DSA:3.30.70.240 611 704 1.5E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PRINTS PR00315 GTP-binding elongation factor signature 139 148 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PRINTS PR00315 GTP-binding elongation factor signature 87 97 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PRINTS PR00315 GTP-binding elongation factor signature 103 114 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 SUPERFAMILY SSF54980 414 491 4.68E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 SUPERFAMILY SSF50447 274 414 5.52E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 SUPERFAMILY SSF52540 8 291 1.37E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 SUPERFAMILY SSF54980 616 703 4.68E-30 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS06190 8396d966f88cd6edf253350cc02ac0f0 707 Gene3D G3DSA:3.40.50.300 6 296 1.3E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 Gene3D G3DSA:3.40.50.1360 78 219 1.4E-19 T 22-04-2016 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 SMART SM01134 73 238 7.6E-52 T 22-04-2016 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 PANTHER PTHR30363:SF1 1 261 3.6E-64 T 22-04-2016 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 SMART SM00420 6 58 1.2E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.8E-9 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.8E-9 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 3.9E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 SUPERFAMILY SSF46785 4 69 2.58E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 Gene3D G3DSA:1.10.10.10 4 62 2.1E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 Pfam PF00455 DeoR C terminal sensor domain 79 236 2.7E-39 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 SUPERFAMILY SSF100950 76 238 7.67E-29 T 22-04-2016 HMPREF9228_RS06815 71e2dcc74086e4274d65774c76473ae8 267 PANTHER PTHR30363 1 261 3.6E-64 T 22-04-2016 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 Gene3D G3DSA:2.40.50.140 130 185 3.1E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 SUPERFAMILY SSF50249 66 127 6.0E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.0E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 PIRSF PIRSF005901 1 187 2.6E-64 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 SMART SM00841 130 185 1.2E-31 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 SUPERFAMILY SSF50249 130 185 7.37E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 Hamap MF_00141 Elongation factor P [efp]. 2 186 49.881 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 SUPERFAMILY SSF50104 4 62 2.29E-18 T 22-04-2016 IPR008991 Translation protein SH3-like domain HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 PANTHER PTHR30053 5 187 2.9E-83 T 22-04-2016 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 Gene3D G3DSA:2.40.50.140 66 127 6.0E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 Gene3D G3DSA:2.30.30.30 4 62 7.0E-29 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 9.9E-25 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 9.6E-75 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 6.0E-23 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 HMPREF9228_RS05985 b6902ef5fdca57c80708cad9aa8ba846 187 SMART SM01185 68 122 1.1E-27 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 HMPREF9228_RS03360 921761374c2a84889600a412c98b63f7 220 Gene3D G3DSA:3.30.160.100 1 101 2.0E-21 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 HMPREF9228_RS03360 921761374c2a84889600a412c98b63f7 220 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 99 2.6E-16 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 HMPREF9228_RS03360 921761374c2a84889600a412c98b63f7 220 PANTHER PTHR33231 1 219 8.6E-35 T 22-04-2016 HMPREF9228_RS03360 921761374c2a84889600a412c98b63f7 220 SUPERFAMILY SSF69754 2 105 7.32E-21 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 HMPREF9228_RS03360 921761374c2a84889600a412c98b63f7 220 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 154 208 5.4E-22 T 22-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal HMPREF9228_RS03360 921761374c2a84889600a412c98b63f7 220 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 104 1.5E-19 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 HMPREF9228_RS03895 eff2624519520131c85c429f0776f11b 230 SUPERFAMILY SSF143081 2 219 1.7E-49 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS03895 eff2624519520131c85c429f0776f11b 230 PANTHER PTHR13604 2 181 1.7E-39 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS03895 eff2624519520131c85c429f0776f11b 230 Gene3D G3DSA:3.90.1680.10 1 219 1.3E-51 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS03895 eff2624519520131c85c429f0776f11b 230 PANTHER PTHR13604:SF0 2 181 1.7E-39 T 22-04-2016 HMPREF9228_RS03895 eff2624519520131c85c429f0776f11b 230 Pfam PF02586 SOS response associated peptidase (SRAP) 1 207 1.2E-48 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS06885 f9d4dd3de0831e831a708691475bf069 327 SMART SM01208 135 213 3.2E-20 T 22-04-2016 IPR011098 G5 domain HMPREF9228_RS06885 f9d4dd3de0831e831a708691475bf069 327 SUPERFAMILY SSF53955 254 318 6.57E-7 T 22-04-2016 IPR023346 Lysozyme-like domain HMPREF9228_RS06885 f9d4dd3de0831e831a708691475bf069 327 Pfam PF07501 G5 domain 139 211 4.4E-15 T 22-04-2016 IPR011098 G5 domain HMPREF9228_RS06885 f9d4dd3de0831e831a708691475bf069 327 Pfam PF03990 Domain of unknown function (DUF348) 79 122 1.8E-7 T 22-04-2016 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- HMPREF9228_RS01905 187a930cfe9e6e3c26724386a24a726a 369 Gene3D G3DSA:3.60.10.10 141 366 1.8E-8 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS01905 187a930cfe9e6e3c26724386a24a726a 369 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 146 359 7.1E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS01905 187a930cfe9e6e3c26724386a24a726a 369 SUPERFAMILY SSF56219 140 368 6.67E-28 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS00505 6a0c04c47f8634f6a32f7d08a8ec9ff3 455 Pfam PF07690 Major Facilitator Superfamily 58 396 6.6E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS00505 6a0c04c47f8634f6a32f7d08a8ec9ff3 455 SUPERFAMILY SSF103473 26 451 2.22E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS00505 6a0c04c47f8634f6a32f7d08a8ec9ff3 455 Gene3D G3DSA:1.20.1250.20 29 236 7.8E-24 T 22-04-2016 HMPREF9228_RS00505 6a0c04c47f8634f6a32f7d08a8ec9ff3 455 Gene3D G3DSA:1.20.1250.20 253 450 5.7E-20 T 22-04-2016 HMPREF9228_RS00505 6a0c04c47f8634f6a32f7d08a8ec9ff3 455 PANTHER PTHR23508:SF16 26 454 2.4E-168 T 22-04-2016 HMPREF9228_RS00505 6a0c04c47f8634f6a32f7d08a8ec9ff3 455 PANTHER PTHR23508 26 454 2.4E-168 T 22-04-2016 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 SUPERFAMILY SSF46689 180 229 2.96E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 SUPERFAMILY SSF46689 233 283 3.29E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 Pfam PF12833 Helix-turn-helix domain 202 281 3.3E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 SMART SM00342 196 279 6.6E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 Gene3D G3DSA:1.10.10.60 235 283 8.8E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 Gene3D G3DSA:2.60.120.280 22 162 4.8E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 Gene3D G3DSA:1.10.10.60 176 231 6.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 SUPERFAMILY SSF51215 21 161 1.44E-20 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 PANTHER PTHR11019 45 287 5.1E-34 T 22-04-2016 HMPREF9228_RS01465 f4269152c5d8eca89175525073c6ca4c 291 Pfam PF02311 AraC-like ligand binding domain 31 135 3.6E-11 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 SMART SM00341 560 639 2.2E-14 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 SMART SM00490 247 328 1.6E-28 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Pfam PF00271 Helicase conserved C-terminal domain 229 328 6.9E-17 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 SMART SM00956 427 530 6.7E-20 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 SUPERFAMILY SSF52540 60 348 5.04E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Pfam PF00570 HRDC domain 563 630 7.9E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 11 476 2.8E-142 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Gene3D G3DSA:3.40.50.300 4 196 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Pfam PF00270 DEAD/DEAH box helicase 22 183 7.7E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 SUPERFAMILY SSF47819 563 633 8.07E-23 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 10 630 3.7E-201 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 SUPERFAMILY SSF46785 424 527 8.03E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Pfam PF09382 RQC domain 423 533 3.0E-21 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Gene3D G3DSA:3.40.50.300 202 341 2.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 PANTHER PTHR13710 5 637 3.3E-231 T 22-04-2016 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Gene3D G3DSA:1.10.10.10 342 533 3.8E-45 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 SMART SM00487 16 213 2.3E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Gene3D G3DSA:1.10.150.80 562 633 3.5E-24 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 PANTHER PTHR13710:SF81 5 637 3.3E-231 T 22-04-2016 HMPREF9228_RS06560 2f5f25c1f04504245cf59c4bff8ef628 639 Pfam PF16124 RecQ zinc-binding 340 419 2.7E-13 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 PIRSF PIRSF001430 1 301 1.7E-86 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 Gene3D G3DSA:3.30.70.580 1 123 1.9E-31 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 278 5.6E-45 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 PANTHER PTHR11142:SF0 1 290 2.9E-68 T 22-04-2016 HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 SUPERFAMILY SSF55120 1 290 1.02E-61 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 284 31.767 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 Gene3D G3DSA:3.30.70.660 125 283 1.4E-32 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 PANTHER PTHR11142 1 290 2.9E-68 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08060 811857184abd380c4c80f32b14ac6fd5 303 Pfam PF01416 tRNA pseudouridine synthase 162 285 3.9E-18 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS03100 0ff1e23b1558dbddd4e62a0fccc943f1 64 Pfam PF01632 Ribosomal protein L35 2 62 1.4E-17 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03100 0ff1e23b1558dbddd4e62a0fccc943f1 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.8E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS03100 0ff1e23b1558dbddd4e62a0fccc943f1 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 14.748 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS03100 0ff1e23b1558dbddd4e62a0fccc943f1 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.0E-10 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS03100 0ff1e23b1558dbddd4e62a0fccc943f1 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.0E-10 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS03100 0ff1e23b1558dbddd4e62a0fccc943f1 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.0E-10 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS03100 0ff1e23b1558dbddd4e62a0fccc943f1 64 PANTHER PTHR33343 1 62 3.8E-12 T 22-04-2016 HMPREF9228_RS03100 0ff1e23b1558dbddd4e62a0fccc943f1 64 SUPERFAMILY SSF143034 2 62 9.42E-16 T 22-04-2016 HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 PANTHER PTHR11014 7 455 5.9E-92 T 22-04-2016 HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 Pfam PF07687 Peptidase dimerisation domain 201 351 2.0E-14 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 Pfam PF01546 Peptidase family M20/M25/M40 92 443 2.4E-32 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 Gene3D G3DSA:3.30.70.360 203 362 7.2E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 SUPERFAMILY SSF53187 7 203 5.74E-52 T 22-04-2016 HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 SUPERFAMILY SSF53187 367 453 5.74E-52 T 22-04-2016 HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 Gene3D G3DSA:3.40.630.10 366 454 2.1E-56 T 22-04-2016 HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 Gene3D G3DSA:3.40.630.10 7 197 2.1E-56 T 22-04-2016 HMPREF9228_RS05760 462526e1d807b3e7844ece010f99b24f 455 PANTHER PTHR11014:SF15 7 455 5.9E-92 T 22-04-2016 HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 198 204 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 SUPERFAMILY SSF53335 5 291 1.26E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 PANTHER PTHR18895:SF64 1 292 9.8E-68 T 22-04-2016 HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 Gene3D G3DSA:3.40.50.150 91 292 5.2E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 289 3.7E-47 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 PANTHER PTHR18895 1 292 9.8E-68 T 22-04-2016 HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 Gene3D G3DSA:1.10.8.10 3 89 4.2E-23 T 22-04-2016 HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 290 8.9E-70 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 294 39.705 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 HMPREF9228_RS07385 65b1ef3bb4f0ad17a2c49b86dfb0e549 294 Pfam PF03602 Conserved hypothetical protein 95 85 209 7.4E-11 T 22-04-2016 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 Gene3D G3DSA:3.40.50.720 3 185 5.5E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 PIRSF PIRSF000114 1 333 3.3E-92 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 Gene3D G3DSA:1.10.1040.10 186 328 6.6E-46 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 182 322 6.4E-43 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 PANTHER PTHR11728 1 333 4.3E-103 T 22-04-2016 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 161 2.2E-44 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 324 32.512 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 SUPERFAMILY SSF51735 4 180 1.36E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 190 211 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 SUPERFAMILY SSF48179 181 331 2.11E-45 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 135 155 4.8E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 4.8E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 240 257 4.8E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 4.8E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 200 224 4.8E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS01645 f16282a966dbb0be728f48dfac949e04 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 175 199 4.8E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 SUPERFAMILY SSF55681 210 556 1.03E-96 T 22-04-2016 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 69 558 34.928 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 PRINTS PR00982 Lysyl-tRNA synthetase signature 310 327 1.2E-32 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 PRINTS PR00982 Lysyl-tRNA synthetase signature 292 305 1.2E-32 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 279 1.2E-32 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 PRINTS PR00982 Lysyl-tRNA synthetase signature 247 257 1.2E-32 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 PRINTS PR00982 Lysyl-tRNA synthetase signature 441 457 1.2E-32 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 SUPERFAMILY SSF50249 62 203 3.67E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 PANTHER PTHR22594:SF4 64 557 3.3E-191 T 22-04-2016 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 Gene3D G3DSA:3.30.930.10 206 553 1.1E-99 T 22-04-2016 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 PANTHER PTHR22594 64 557 3.3E-191 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 Gene3D G3DSA:2.40.50.140 64 203 2.1E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 Pfam PF01336 OB-fold nucleic acid binding domain 118 193 1.5E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 65 557 1.2E-139 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 HMPREF9228_RS07865 ca49843932f7d7085cae82d7e1f5ee54 560 Pfam PF00152 tRNA synthetases class II (D, K and N) 211 555 5.2E-69 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS05870 a2f2a75895f2c500d88367065669cbc7 576 SUPERFAMILY SSF55486 314 505 9.52E-60 T 22-04-2016 HMPREF9228_RS05870 a2f2a75895f2c500d88367065669cbc7 576 Pfam PF10103 Zinicin-like metallopeptidase 310 504 1.1E-59 T 22-04-2016 IPR018766 Zinicin-like metallopeptidase type 2 HMPREF9228_RS05870 a2f2a75895f2c500d88367065669cbc7 576 Pfam PF10103 Zinicin-like metallopeptidase 78 257 2.0E-31 T 22-04-2016 IPR018766 Zinicin-like metallopeptidase type 2 HMPREF9228_RS05870 a2f2a75895f2c500d88367065669cbc7 576 PANTHER PTHR39420:SF2 326 550 7.8E-56 T 22-04-2016 HMPREF9228_RS05870 a2f2a75895f2c500d88367065669cbc7 576 SUPERFAMILY SSF55486 188 258 1.1E-28 T 22-04-2016 HMPREF9228_RS05870 a2f2a75895f2c500d88367065669cbc7 576 SUPERFAMILY SSF55486 77 157 1.1E-28 T 22-04-2016 HMPREF9228_RS05870 a2f2a75895f2c500d88367065669cbc7 576 PANTHER PTHR39420 326 550 7.8E-56 T 22-04-2016 HMPREF9228_RS05870 a2f2a75895f2c500d88367065669cbc7 576 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 317 504 4.3E-53 T 22-04-2016 IPR018766 Zinicin-like metallopeptidase type 2 HMPREF9228_RS00385 ef5ce1f9fe12993d9db607a524b6c394 241 PANTHER PTHR34071 13 80 2.5E-24 T 22-04-2016 HMPREF9228_RS00385 ef5ce1f9fe12993d9db607a524b6c394 241 PANTHER PTHR34071 111 218 2.5E-24 T 22-04-2016 HMPREF9228_RS00385 ef5ce1f9fe12993d9db607a524b6c394 241 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 37 215 2.2E-8 T 22-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related HMPREF9228_RS00385 ef5ce1f9fe12993d9db607a524b6c394 241 SUPERFAMILY SSF50475 110 220 2.03E-31 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 HMPREF9228_RS00385 ef5ce1f9fe12993d9db607a524b6c394 241 SUPERFAMILY SSF50475 25 75 2.03E-31 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 HMPREF9228_RS00385 ef5ce1f9fe12993d9db607a524b6c394 241 Gene3D G3DSA:2.30.110.10 110 223 2.6E-53 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 HMPREF9228_RS00385 ef5ce1f9fe12993d9db607a524b6c394 241 Gene3D G3DSA:2.30.110.10 26 73 2.6E-53 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 HMPREF9228_RS06575 9ff33e10c88f2a421719df4eb32fc620 261 SUPERFAMILY SSF52540 8 255 3.41E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06575 9ff33e10c88f2a421719df4eb32fc620 261 Pfam PF00005 ABC transporter 30 182 1.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS06575 9ff33e10c88f2a421719df4eb32fc620 261 Gene3D G3DSA:3.40.50.300 8 258 8.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06575 9ff33e10c88f2a421719df4eb32fc620 261 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS06575 9ff33e10c88f2a421719df4eb32fc620 261 PANTHER PTHR24220 10 258 2.0E-82 T 22-04-2016 HMPREF9228_RS06575 9ff33e10c88f2a421719df4eb32fc620 261 SMART SM00382 37 233 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 PIRSF PIRSF006621 3 338 1.3E-93 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 PANTHER PTHR11082 1 358 1.8E-132 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 Gene3D G3DSA:1.10.1200.80 260 331 1.3E-16 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 Gene3D G3DSA:3.20.20.70 10 253 6.1E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 SUPERFAMILY SSF51395 14 325 1.1E-77 T 22-04-2016 HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 7 330 1.8E-105 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 PANTHER PTHR11082:SF25 1 358 1.8E-132 T 22-04-2016 HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 Pfam PF01207 Dihydrouridine synthase (Dus) 17 321 4.4E-92 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 HMPREF9228_RS02710 fe03b19308ef0190bd5fab87a8e9c18d 380 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 PANTHER PTHR19211:SF7 1 552 2.7E-302 T 22-04-2016 HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 555 8.4E-265 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 SMART SM00382 30 251 2.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 SMART SM00382 348 518 1.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 Gene3D G3DSA:3.40.50.300 322 513 2.9E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 Gene3D G3DSA:3.40.50.300 8 92 5.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 Gene3D G3DSA:3.40.50.300 125 275 5.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 PANTHER PTHR19211 1 552 2.7E-302 T 22-04-2016 HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 SUPERFAMILY SSF52540 8 241 9.46E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 SUPERFAMILY SSF52540 308 514 2.62E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 Pfam PF12848 ABC transporter 229 305 2.0E-14 T 22-04-2016 IPR032781 ABC-transporter extension domain HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 Pfam PF00005 ABC transporter 340 473 4.1E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 Pfam PF00005 ABC transporter 21 190 2.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS07455 6fe41e5bca12c6f153492deb1c531ca9 559 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS00140 1448bdd21bdd1336743ae258803a1922 472 SUPERFAMILY SSF53756 162 462 1.78E-56 T 22-04-2016 HMPREF9228_RS00140 1448bdd21bdd1336743ae258803a1922 472 SUPERFAMILY SSF53756 2 87 1.78E-56 T 22-04-2016 HMPREF9228_RS00140 1448bdd21bdd1336743ae258803a1922 472 Pfam PF11997 Domain of unknown function (DUF3492) 1 257 1.9E-82 T 22-04-2016 IPR022622 Domain of unknown function DUF3492 HMPREF9228_RS00140 1448bdd21bdd1336743ae258803a1922 472 PANTHER PTHR12526 1 43 1.2E-34 T 22-04-2016 HMPREF9228_RS00140 1448bdd21bdd1336743ae258803a1922 472 PANTHER PTHR12526 126 467 1.2E-34 T 22-04-2016 HMPREF9228_RS00140 1448bdd21bdd1336743ae258803a1922 472 Gene3D G3DSA:3.40.50.2000 285 442 6.4E-16 T 22-04-2016 HMPREF9228_RS00140 1448bdd21bdd1336743ae258803a1922 472 Pfam PF00534 Glycosyl transferases group 1 285 443 1.9E-22 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 Gene3D G3DSA:3.40.50.880 6 196 1.7E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 7 194 3.5E-58 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 3.0E-12 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 3.0E-12 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 3.0E-12 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PANTHER PTHR11922:SF7 6 206 3.9E-69 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 SUPERFAMILY SSF52317 6 196 5.03E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 Pfam PF00117 Glutamine amidotransferase class-I 9 193 7.6E-48 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 6.4E-8 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 6.4E-8 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PANTHER PTHR11922 6 206 3.9E-69 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00097 Anthranilate synthase component II signature 106 114 2.3E-31 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00097 Anthranilate synthase component II signature 126 138 2.3E-31 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.3E-31 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00097 Anthranilate synthase component II signature 7 21 2.3E-31 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00097 Anthranilate synthase component II signature 53 62 2.3E-31 T 22-04-2016 HMPREF9228_RS00305 136f5cb3a43703ed9e2e46eca863c44b 214 PRINTS PR00097 Anthranilate synthase component II signature 172 185 2.3E-31 T 22-04-2016 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 SUPERFAMILY SSF143800 1 66 4.71E-26 T 22-04-2016 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 Pfam PF01197 Ribosomal protein L31 1 66 2.9E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.8E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 PRINTS PR01249 Ribosomal protein L31 signature 47 65 6.8E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 PRINTS PR01249 Ribosomal protein L31 signature 32 47 6.8E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 PANTHER PTHR33280 1 66 9.0E-33 T 22-04-2016 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.8E-33 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 30.599 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS07395 22c45c25c882a72e1cae140b335d8fbf 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08560 5057368afe93b5e1ec191c5371cfd36a 225 PANTHER PTHR23402 2 224 7.1E-37 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like HMPREF9228_RS08560 5057368afe93b5e1ec191c5371cfd36a 225 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 144 158 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 HMPREF9228_RS08560 5057368afe93b5e1ec191c5371cfd36a 225 Gene3D G3DSA:3.40.630.20 2 213 5.7E-47 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like HMPREF9228_RS08560 5057368afe93b5e1ec191c5371cfd36a 225 SUPERFAMILY SSF53182 4 216 1.44E-49 T 22-04-2016 HMPREF9228_RS08560 5057368afe93b5e1ec191c5371cfd36a 225 Pfam PF01470 Pyroglutamyl peptidase 5 187 3.8E-36 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like HMPREF9228_RS08560 5057368afe93b5e1ec191c5371cfd36a 225 PIRSF PIRSF015592 3 225 7.3E-68 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 HMPREF9228_RS01140 6fb48cdca4d90d254aedd1c3462852a1 265 SMART SM00382 27 211 2.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01140 6fb48cdca4d90d254aedd1c3462852a1 265 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS01140 6fb48cdca4d90d254aedd1c3462852a1 265 Gene3D G3DSA:3.40.50.300 2 215 2.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01140 6fb48cdca4d90d254aedd1c3462852a1 265 PANTHER PTHR24220:SF86 4 220 1.6E-99 T 22-04-2016 HMPREF9228_RS01140 6fb48cdca4d90d254aedd1c3462852a1 265 PANTHER PTHR24220 4 220 1.6E-99 T 22-04-2016 HMPREF9228_RS01140 6fb48cdca4d90d254aedd1c3462852a1 265 Pfam PF00005 ABC transporter 19 163 8.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS01140 6fb48cdca4d90d254aedd1c3462852a1 265 SUPERFAMILY SSF52540 2 220 2.72E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03805 86f737282ed37d114f90c6ca9c7be911 98 SUPERFAMILY SSF103473 3 73 2.22E-8 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS03805 86f737282ed37d114f90c6ca9c7be911 98 Gene3D G3DSA:1.20.1250.20 5 70 2.5E-7 T 22-04-2016 HMPREF9228_RS02635 f7d46c8291077c1b23c1eaf37b7956e0 255 PANTHER PTHR18964 6 250 3.3E-52 T 22-04-2016 HMPREF9228_RS02635 f7d46c8291077c1b23c1eaf37b7956e0 255 SUPERFAMILY SSF53067 8 251 8.51E-38 T 22-04-2016 HMPREF9228_RS02635 f7d46c8291077c1b23c1eaf37b7956e0 255 PANTHER PTHR18964:SF138 6 250 3.3E-52 T 22-04-2016 HMPREF9228_RS02635 f7d46c8291077c1b23c1eaf37b7956e0 255 Pfam PF00480 ROK family 8 166 8.9E-22 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS02635 f7d46c8291077c1b23c1eaf37b7956e0 255 Gene3D G3DSA:3.30.420.40 112 252 1.6E-34 T 22-04-2016 HMPREF9228_RS02635 f7d46c8291077c1b23c1eaf37b7956e0 255 Gene3D G3DSA:3.30.420.40 3 111 2.4E-38 T 22-04-2016 HMPREF9228_RS01220 0fa2a7aafa894ba03b000384f4be356f 431 Pfam PF00909 Ammonium Transporter Family 10 417 4.0E-113 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 HMPREF9228_RS01220 0fa2a7aafa894ba03b000384f4be356f 431 Gene3D G3DSA:1.10.3430.10 4 398 1.4E-128 T 22-04-2016 IPR029020 Ammonium/urea transporter HMPREF9228_RS01220 0fa2a7aafa894ba03b000384f4be356f 431 PANTHER PTHR11730:SF17 4 422 1.2E-151 T 22-04-2016 HMPREF9228_RS01220 0fa2a7aafa894ba03b000384f4be356f 431 ProSitePatterns PS01219 Ammonium transporters signature. 179 204 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 HMPREF9228_RS01220 0fa2a7aafa894ba03b000384f4be356f 431 SUPERFAMILY SSF111352 4 398 1.44E-114 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 HMPREF9228_RS01220 0fa2a7aafa894ba03b000384f4be356f 431 PANTHER PTHR11730 4 422 1.2E-151 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 HMPREF9228_RS01220 0fa2a7aafa894ba03b000384f4be356f 431 TIGRFAM TIGR00836 amt: ammonium transporter 8 417 3.1E-123 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 HMPREF9228_RS04445 a2ff5c11eb25889c221f201adecb30a1 627 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 306 489 2.2E-9 T 22-04-2016 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 Gene3D G3DSA:3.30.420.40 206 394 7.5E-71 T 22-04-2016 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 SUPERFAMILY SSF53067 3 196 4.75E-54 T 22-04-2016 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 Gene3D G3DSA:3.30.420.40 4 205 2.0E-5 T 22-04-2016 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PANTHER PTHR21060:SF11 1 405 1.9E-171 T 22-04-2016 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 Pfam PF00871 Acetokinase family 5 390 1.6E-130 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 Hamap MF_00020 Acetate kinase [ackA]. 1 399 160.203 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 TIGRFAM TIGR00016 ackA: acetate kinase 3 393 5.3E-124 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PRINTS PR00471 Acetate kinase family signature 204 225 9.1E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PRINTS PR00471 Acetate kinase family signature 5 16 9.1E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PRINTS PR00471 Acetate kinase family signature 322 338 9.1E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PRINTS PR00471 Acetate kinase family signature 377 389 9.1E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PRINTS PR00471 Acetate kinase family signature 174 187 9.1E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PRINTS PR00471 Acetate kinase family signature 300 313 9.1E-40 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 SUPERFAMILY SSF53067 158 394 1.3E-78 T 22-04-2016 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PANTHER PTHR21060 1 405 1.9E-171 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS05240 9e10923a70c4e853e97f85dcadb0ec46 409 PIRSF PIRSF000722 1 400 1.3E-128 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 SUPERFAMILY SSF110849 130 175 1.57E-23 T 22-04-2016 IPR003115 ParB/Sulfiredoxin HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 SUPERFAMILY SSF110849 202 246 1.57E-23 T 22-04-2016 IPR003115 ParB/Sulfiredoxin HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 200 330 6.7E-41 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 PANTHER PTHR33375:SF3 130 173 3.3E-91 T 22-04-2016 HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 PANTHER PTHR33375:SF3 193 409 3.3E-91 T 22-04-2016 HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 Pfam PF02195 ParB-like nuclease domain 130 243 1.0E-19 T 22-04-2016 IPR003115 ParB/Sulfiredoxin HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 PANTHER PTHR33375 130 173 3.3E-91 T 22-04-2016 HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 PANTHER PTHR33375 193 409 3.3E-91 T 22-04-2016 HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 SUPERFAMILY SSF109709 236 344 6.93E-31 T 22-04-2016 HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 SMART SM00470 129 244 2.5E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin HMPREF9228_RS09740 8c70ad07e5ee7f12e2b1eccdd0eb2838 421 Gene3D G3DSA:3.90.1530.10 127 250 5.7E-33 T 22-04-2016 HMPREF9228_RS04830 ffba62915acfb4e1dd80bf4fbddf5423 350 PANTHER PTHR11101 10 347 1.6E-52 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 HMPREF9228_RS04830 ffba62915acfb4e1dd80bf4fbddf5423 350 Pfam PF01384 Phosphate transporter family 180 339 2.9E-47 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 HMPREF9228_RS04830 ffba62915acfb4e1dd80bf4fbddf5423 350 Pfam PF01384 Phosphate transporter family 32 176 6.8E-25 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.5E-92 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 PANTHER PTHR12532 1 242 1.2E-104 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 Pfam PF01709 Transcriptional regulator 5 238 1.6E-90 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 Gene3D G3DSA:3.30.70.980 136 206 2.0E-25 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 SUPERFAMILY SSF75625 3 247 5.49E-91 T 22-04-2016 IPR029072 YebC-like HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 Gene3D G3DSA:1.10.10.200 1 79 7.7E-33 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 Gene3D G3DSA:3.30.1270.10 213 248 7.8E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 Gene3D G3DSA:3.30.1270.10 83 135 7.8E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 HMPREF9228_RS04070 5b96623de11cc950262cf01b9e528b4c 251 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 34.378 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like HMPREF9228_RS05360 47cd0bf15ffa5d5cb248b1fb3bb5519f 277 PANTHER PTHR30477:SF0 9 276 1.8E-40 T 22-04-2016 HMPREF9228_RS05360 47cd0bf15ffa5d5cb248b1fb3bb5519f 277 Pfam PF00950 ABC 3 transport family 19 269 2.7E-49 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 HMPREF9228_RS05360 47cd0bf15ffa5d5cb248b1fb3bb5519f 277 PANTHER PTHR30477 9 276 1.8E-40 T 22-04-2016 HMPREF9228_RS05360 47cd0bf15ffa5d5cb248b1fb3bb5519f 277 Gene3D G3DSA:1.10.3470.10 16 255 2.6E-6 T 22-04-2016 IPR029022 ABC transporter, BtuC-like HMPREF9228_RS05360 47cd0bf15ffa5d5cb248b1fb3bb5519f 277 SUPERFAMILY SSF81345 13 266 4.71E-32 T 22-04-2016 IPR029022 ABC transporter, BtuC-like HMPREF9228_RS02915 9112cbba012507fa73d33a0143ffe7f4 173 SUPERFAMILY SSF89447 30 165 7.5E-44 T 22-04-2016 HMPREF9228_RS02915 9112cbba012507fa73d33a0143ffe7f4 173 PANTHER PTHR34701 31 172 3.1E-44 T 22-04-2016 HMPREF9228_RS02915 9112cbba012507fa73d33a0143ffe7f4 173 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 34 157 2.0E-65 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 HMPREF9228_RS02915 9112cbba012507fa73d33a0143ffe7f4 173 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 31 166 1.4E-35 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 HMPREF9228_RS02915 9112cbba012507fa73d33a0143ffe7f4 173 Pfam PF02381 MraZ protein, putative antitoxin-like 101 165 6.9E-16 T 22-04-2016 IPR020603 MraZ domain HMPREF9228_RS02915 9112cbba012507fa73d33a0143ffe7f4 173 Pfam PF02381 MraZ protein, putative antitoxin-like 30 99 5.1E-14 T 22-04-2016 IPR020603 MraZ domain HMPREF9228_RS02915 9112cbba012507fa73d33a0143ffe7f4 173 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 173 49.272 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 HMPREF9228_RS00960 4ff226ca0340d0f6bbdf22487f6709fb 115 Pfam PF01187 Macrophage migration inhibitory factor (MIF) 5 113 1.3E-4 T 22-04-2016 IPR001398 Macrophage migration inhibitory factor HMPREF9228_RS00960 4ff226ca0340d0f6bbdf22487f6709fb 115 Gene3D G3DSA:3.30.429.10 1 115 2.6E-27 T 22-04-2016 HMPREF9228_RS00960 4ff226ca0340d0f6bbdf22487f6709fb 115 PANTHER PTHR11954 2 115 5.3E-16 T 22-04-2016 IPR001398 Macrophage migration inhibitory factor HMPREF9228_RS00960 4ff226ca0340d0f6bbdf22487f6709fb 115 ProDom PD004816 MACROPHAGE MIGRATION INHIBITORY FACTOR TAUTOMERASE MIF PHENYLPYRUVATE CYTOKINE RESPONSE INFLAMMATORY 34 115 3.0E-13 T 22-04-2016 IPR001398 Macrophage migration inhibitory factor HMPREF9228_RS00960 4ff226ca0340d0f6bbdf22487f6709fb 115 PANTHER PTHR11954:SF6 2 115 5.3E-16 T 22-04-2016 HMPREF9228_RS00960 4ff226ca0340d0f6bbdf22487f6709fb 115 SUPERFAMILY SSF55331 1 115 3.38E-25 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily HMPREF9228_RS01900 656ac5e45ec3a1727e5c03b1d698189c 153 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01900 656ac5e45ec3a1727e5c03b1d698189c 153 PANTHER PTHR12919:SF20 2 150 4.9E-40 T 22-04-2016 HMPREF9228_RS01900 656ac5e45ec3a1727e5c03b1d698189c 153 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 22.638 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01900 656ac5e45ec3a1727e5c03b1d698189c 153 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 79 3.3E-31 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01900 656ac5e45ec3a1727e5c03b1d698189c 153 Gene3D G3DSA:3.30.1320.10 3 83 1.4E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain HMPREF9228_RS01900 656ac5e45ec3a1727e5c03b1d698189c 153 PANTHER PTHR12919 2 150 4.9E-40 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01900 656ac5e45ec3a1727e5c03b1d698189c 153 SUPERFAMILY SSF54565 3 93 5.23E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain HMPREF9228_RS01900 656ac5e45ec3a1727e5c03b1d698189c 153 Pfam PF00886 Ribosomal protein S16 9 67 6.7E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09530 49904f85ad2c8525316ddd61d0833f8c 503 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 251 431 9.4E-13 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS09530 49904f85ad2c8525316ddd61d0833f8c 503 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 84 235 1.5E-6 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS09530 49904f85ad2c8525316ddd61d0833f8c 503 PANTHER PTHR39191:SF1 22 503 5.6E-87 T 22-04-2016 HMPREF9228_RS09530 49904f85ad2c8525316ddd61d0833f8c 503 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 2 503 155.555 T 22-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS09530 49904f85ad2c8525316ddd61d0833f8c 503 PANTHER PTHR39191 22 503 5.6E-87 T 22-04-2016 HMPREF9228_RS01815 d11028f6ef1949f89c815964e0d8074c 236 SMART SM00382 47 234 6.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01815 d11028f6ef1949f89c815964e0d8074c 236 Pfam PF00005 ABC transporter 42 185 3.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS01815 d11028f6ef1949f89c815964e0d8074c 236 PANTHER PTHR24220 22 230 1.4E-74 T 22-04-2016 HMPREF9228_RS01815 d11028f6ef1949f89c815964e0d8074c 236 PANTHER PTHR24220:SF587 22 230 1.4E-74 T 22-04-2016 HMPREF9228_RS01815 d11028f6ef1949f89c815964e0d8074c 236 Gene3D G3DSA:3.40.50.300 17 228 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01815 d11028f6ef1949f89c815964e0d8074c 236 SUPERFAMILY SSF52540 19 230 4.53E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01960 3b719fce0d44f03dbe8b67e4757e4dea 64 SUPERFAMILY SSF57829 1 54 2.32E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 HMPREF9228_RS01960 3b719fce0d44f03dbe8b67e4757e4dea 64 Pfam PF01783 Ribosomal L32p protein family 2 54 3.9E-21 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS01960 3b719fce0d44f03dbe8b67e4757e4dea 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 18.501 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS01960 3b719fce0d44f03dbe8b67e4757e4dea 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.3E-22 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 Gene3D G3DSA:3.30.565.10 6 238 4.5E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 SMART SM00387 31 201 4.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PANTHER PTHR10169:SF20 1 235 3.9E-206 T 22-04-2016 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PANTHER PTHR10169:SF20 321 782 3.9E-206 T 22-04-2016 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PANTHER PTHR10169 1 235 3.9E-206 T 22-04-2016 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PANTHER PTHR10169 321 782 3.9E-206 T 22-04-2016 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 Pfam PF00204 DNA gyrase B 333 530 6.7E-50 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 SUPERFAMILY SSF55874 6 238 1.19E-60 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 ProSitePatterns PS00177 DNA topoisomerase II signature. 562 570 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 Gene3D G3DSA:3.30.230.10 332 532 6.4E-43 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR00418 DNA topoisomerase II family signature 713 729 1.6E-47 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR00418 DNA topoisomerase II family signature 626 642 1.6E-47 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR00418 DNA topoisomerase II family signature 644 661 1.6E-47 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.6E-47 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.6E-47 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.6E-47 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR00418 DNA topoisomerase II family signature 664 676 1.6E-47 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 137 2.0E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR01159 DNA gyrase subunit B signature 734 746 1.4E-12 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR01159 DNA gyrase subunit B signature 6 16 1.4E-12 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR01159 DNA gyrase subunit B signature 750 766 1.4E-12 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 PRINTS PR01159 DNA gyrase subunit B signature 610 619 1.4E-12 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 SUPERFAMILY SSF54211 333 531 2.85E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 Pfam PF01751 Toprim domain 559 663 2.5E-16 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 SMART SM00433 35 774 7.2E-261 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 Gene3D G3DSA:3.40.50.670 544 762 3.7E-77 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 712 769 5.1E-25 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03405 fd2063717d6c32c0e0b202bcc3fbf849 783 SUPERFAMILY SSF56719 534 779 6.54E-79 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:3.30.1490.20 162 185 3.4E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:3.30.1490.20 232 273 3.4E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 PANTHER PTHR32282 32 977 0.0 T 22-04-2016 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Pfam PF00005 ABC transporter 661 897 4.1E-9 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 SUPERFAMILY SSF52540 654 951 1.74E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:1.20.1580.10 731 857 1.9E-53 T 22-04-2016 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 35 962 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:1.10.8.280 322 444 4.0E-39 T 22-04-2016 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 PANTHER PTHR32282:SF2 32 977 0.0 T 22-04-2016 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 ProSitePatterns PS00211 ABC transporters family signature. 867 881 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 ProSitePatterns PS00211 ABC transporters family signature. 525 539 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 SUPERFAMILY SSF52540 37 236 3.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 SUPERFAMILY SSF52540 468 607 3.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:1.20.1580.10 445 515 5.7E-53 T 22-04-2016 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:1.20.1580.10 286 320 5.7E-53 T 22-04-2016 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:1.20.1580.10 123 161 5.7E-53 T 22-04-2016 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Hamap MF_00205 UvrABC system protein A [uvrA]. 33 977 22.526 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:3.40.50.300 516 635 5.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:3.40.50.300 858 975 2.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:3.40.50.300 36 121 5.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04210 8f483d92e8d53caf916e7e5876fe2835 977 Gene3D G3DSA:3.40.50.300 644 717 2.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07835 6e6b66417ca3f85e3fc456e0d81c387b 378 PANTHER PTHR21152 3 378 2.5E-127 T 22-04-2016 HMPREF9228_RS07835 6e6b66417ca3f85e3fc456e0d81c387b 378 SUPERFAMILY SSF53383 16 377 5.59E-71 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS07835 6e6b66417ca3f85e3fc456e0d81c387b 378 Gene3D G3DSA:3.40.640.10 18 272 2.2E-49 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS07835 6e6b66417ca3f85e3fc456e0d81c387b 378 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 10 377 7.5E-158 T 22-04-2016 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 HMPREF9228_RS07835 6e6b66417ca3f85e3fc456e0d81c387b 378 PIRSF PIRSF000525 1 378 4.3E-82 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 HMPREF9228_RS07835 6e6b66417ca3f85e3fc456e0d81c387b 378 Pfam PF00266 Aminotransferase class-V 40 339 2.9E-15 T 22-04-2016 IPR000192 Aminotransferase class V domain HMPREF9228_RS07835 6e6b66417ca3f85e3fc456e0d81c387b 378 Gene3D G3DSA:3.90.1150.10 273 376 9.2E-7 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS07835 6e6b66417ca3f85e3fc456e0d81c387b 378 PANTHER PTHR21152:SF20 3 378 2.5E-127 T 22-04-2016 HMPREF9228_RS01175 6a090685094c873a08d7ef56239c6ae3 280 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 25 278 2.6E-48 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 HMPREF9228_RS01175 6a090685094c873a08d7ef56239c6ae3 280 Gene3D G3DSA:3.40.50.1360 5 279 1.2E-61 T 22-04-2016 HMPREF9228_RS01175 6a090685094c873a08d7ef56239c6ae3 280 SUPERFAMILY SSF100950 12 125 1.07E-48 T 22-04-2016 HMPREF9228_RS01175 6a090685094c873a08d7ef56239c6ae3 280 SUPERFAMILY SSF100950 155 280 1.07E-48 T 22-04-2016 HMPREF9228_RS01175 6a090685094c873a08d7ef56239c6ae3 280 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 270 3.0E-66 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 HMPREF9228_RS01175 6a090685094c873a08d7ef56239c6ae3 280 PANTHER PTHR11054 5 120 5.8E-52 T 22-04-2016 HMPREF9228_RS01175 6a090685094c873a08d7ef56239c6ae3 280 PANTHER PTHR11054 143 280 5.8E-52 T 22-04-2016 HMPREF9228_RS03075 777be0f94ff3d4941178af1241ed2daa 168 PIRSF PIRSF006181 8 168 1.6E-56 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC HMPREF9228_RS03075 777be0f94ff3d4941178af1241ed2daa 168 PANTHER PTHR30411 1 165 7.7E-54 T 22-04-2016 HMPREF9228_RS03075 777be0f94ff3d4941178af1241ed2daa 168 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 13 165 2.6E-53 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC HMPREF9228_RS03075 777be0f94ff3d4941178af1241ed2daa 168 PANTHER PTHR30411:SF0 1 165 7.7E-54 T 22-04-2016 HMPREF9228_RS03075 777be0f94ff3d4941178af1241ed2daa 168 Pfam PF04073 Aminoacyl-tRNA editing domain 45 156 6.8E-21 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS03075 777be0f94ff3d4941178af1241ed2daa 168 SUPERFAMILY SSF55826 13 165 6.93E-39 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS03075 777be0f94ff3d4941178af1241ed2daa 168 Gene3D G3DSA:3.90.960.10 12 165 1.7E-52 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS08235 6b2e6d97309dd5467ab33e2717468ca7 382 PANTHER PTHR18964:SF108 58 370 2.9E-31 T 22-04-2016 HMPREF9228_RS08235 6b2e6d97309dd5467ab33e2717468ca7 382 Gene3D G3DSA:3.30.420.40 79 215 2.7E-20 T 22-04-2016 HMPREF9228_RS08235 6b2e6d97309dd5467ab33e2717468ca7 382 Gene3D G3DSA:3.30.420.40 216 338 1.6E-24 T 22-04-2016 HMPREF9228_RS08235 6b2e6d97309dd5467ab33e2717468ca7 382 Gene3D G3DSA:1.10.10.10 9 71 1.7E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS08235 6b2e6d97309dd5467ab33e2717468ca7 382 Pfam PF00480 ROK family 83 319 6.2E-23 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS08235 6b2e6d97309dd5467ab33e2717468ca7 382 PANTHER PTHR18964 58 370 2.9E-31 T 22-04-2016 HMPREF9228_RS08235 6b2e6d97309dd5467ab33e2717468ca7 382 SUPERFAMILY SSF53067 83 364 6.79E-24 T 22-04-2016 HMPREF9228_RS08235 6b2e6d97309dd5467ab33e2717468ca7 382 SUPERFAMILY SSF46785 9 72 5.13E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06730 e8bfd65069ea367a68596f63f1c97e4a 439 PANTHER PTHR23542:SF1 14 231 7.5E-59 T 22-04-2016 HMPREF9228_RS06730 e8bfd65069ea367a68596f63f1c97e4a 439 PANTHER PTHR23542:SF1 249 438 7.5E-59 T 22-04-2016 HMPREF9228_RS06730 e8bfd65069ea367a68596f63f1c97e4a 439 PANTHER PTHR23542 14 231 7.5E-59 T 22-04-2016 HMPREF9228_RS06730 e8bfd65069ea367a68596f63f1c97e4a 439 PANTHER PTHR23542 249 438 7.5E-59 T 22-04-2016 HMPREF9228_RS06730 e8bfd65069ea367a68596f63f1c97e4a 439 Gene3D G3DSA:1.20.1250.20 259 429 1.0E-11 T 22-04-2016 HMPREF9228_RS06730 e8bfd65069ea367a68596f63f1c97e4a 439 Gene3D G3DSA:1.20.1250.20 28 213 3.0E-8 T 22-04-2016 HMPREF9228_RS06730 e8bfd65069ea367a68596f63f1c97e4a 439 SUPERFAMILY SSF103473 28 432 2.22E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS06730 e8bfd65069ea367a68596f63f1c97e4a 439 Pfam PF07690 Major Facilitator Superfamily 42 338 1.2E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 Gene3D G3DSA:2.30.33.40 4 96 1.9E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 5 29 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 SMART SM00883 4 96 2.8E-54 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 PANTHER PTHR10772 4 96 2.4E-43 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 SUPERFAMILY SSF50129 3 96 9.42E-35 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 Pfam PF00166 Chaperonin 10 Kd subunit 4 95 4.2E-36 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 PRINTS PR00297 10kDa chaperonin signature 62 74 1.5E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 PRINTS PR00297 10kDa chaperonin signature 5 20 1.5E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 PRINTS PR00297 10kDa chaperonin signature 27 48 1.5E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 PRINTS PR00297 10kDa chaperonin signature 83 96 1.5E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS08380 b639e97405819e2671c8d2a5e452f7d1 97 Hamap MF_00580 10 kDa chaperonin [groS]. 4 97 25.271 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 HMPREF9228_RS04430 3a20caa87bbb3605cbf20f288b3e0a4d 282 Pfam PF00005 ABC transporter 22 172 7.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04430 3a20caa87bbb3605cbf20f288b3e0a4d 282 Gene3D G3DSA:3.40.50.300 2 251 9.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04430 3a20caa87bbb3605cbf20f288b3e0a4d 282 PANTHER PTHR24220:SF383 7 221 2.1E-67 T 22-04-2016 HMPREF9228_RS04430 3a20caa87bbb3605cbf20f288b3e0a4d 282 PANTHER PTHR24220:SF383 243 266 2.1E-67 T 22-04-2016 HMPREF9228_RS04430 3a20caa87bbb3605cbf20f288b3e0a4d 282 SUPERFAMILY SSF52540 3 238 6.84E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04430 3a20caa87bbb3605cbf20f288b3e0a4d 282 PANTHER PTHR24220 7 221 2.1E-67 T 22-04-2016 HMPREF9228_RS04430 3a20caa87bbb3605cbf20f288b3e0a4d 282 PANTHER PTHR24220 243 266 2.1E-67 T 22-04-2016 HMPREF9228_RS04430 3a20caa87bbb3605cbf20f288b3e0a4d 282 SMART SM00382 30 223 4.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 28 203 1.4E-68 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 Gene3D G3DSA:3.30.1130.10 76 203 7.7E-56 T 22-04-2016 HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 SUPERFAMILY SSF55620 18 203 2.15E-71 T 22-04-2016 HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 83 99 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 PANTHER PTHR11109 2 203 5.0E-99 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 Gene3D G3DSA:1.10.286.10 23 74 2.5E-21 T 22-04-2016 HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 Pfam PF01227 GTP cyclohydrolase I 28 203 1.9E-71 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 132 142 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 HMPREF9228_RS07480 9128828bfe314fa259c6dd3d2d797c3a 206 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 23 204 38.875 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 PANTHER PTHR11938 73 323 9.7E-46 T 22-04-2016 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 SUPERFAMILY SSF51395 21 307 8.99E-73 T 22-04-2016 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 259 279 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 PANTHER PTHR11938:SF5 73 323 9.7E-46 T 22-04-2016 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 PIRSF PIRSF000164 1 323 3.9E-83 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 25 321 33.638 T 22-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 27 308 7.8E-90 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 Gene3D G3DSA:3.20.20.70 16 309 7.6E-81 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS04275 7f0d54755208e180c02bd9532836e29d 323 Pfam PF01180 Dihydroorotate dehydrogenase 26 306 3.5E-63 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 SUPERFAMILY SSF54534 82 153 3.66E-11 T 22-04-2016 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 PANTHER PTHR30437 1 154 2.4E-27 T 22-04-2016 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 Gene3D G3DSA:3.10.50.30 80 156 9.5E-15 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 PIRSF PIRSF006092 1 159 1.2E-40 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 SUPERFAMILY SSF46557 6 80 6.67E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 155 1.5E-14 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 156 25.531 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 5.6E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 HMPREF9228_RS05450 54bb70a81200d4f925469c33f8bf2c21 159 Gene3D G3DSA:1.10.287.180 5 78 5.5E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 SMART SM00354 1 71 3.7E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 Gene3D G3DSA:3.40.50.2300 58 172 2.3E-23 T 22-04-2016 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 PANTHER PTHR30146 1 343 4.3E-36 T 22-04-2016 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 47 2.7E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 SUPERFAMILY SSF53822 59 315 1.94E-17 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 Gene3D G3DSA:3.40.50.2300 173 277 2.5E-4 T 22-04-2016 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 Gene3D G3DSA:1.10.260.40 1 47 6.0E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 Pfam PF13377 Periplasmic binding protein-like domain 169 333 6.1E-8 T 22-04-2016 HMPREF9228_RS06475 376fd3dc85c82aa79e22fc1355a318cd 414 SUPERFAMILY SSF47413 1 53 5.9E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 41 352 5.8E-54 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 PANTHER PTHR30616 21 99 1.3E-47 T 22-04-2016 HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 PANTHER PTHR30616 147 280 1.3E-47 T 22-04-2016 HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 SUPERFAMILY SSF64438 27 99 3.01E-57 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 SUPERFAMILY SSF64438 146 280 3.01E-57 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 SUPERFAMILY SSF64438 321 353 3.01E-57 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 Gene3D G3DSA:3.60.140.10 24 104 1.9E-78 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 Gene3D G3DSA:3.60.140.10 151 280 1.9E-78 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase HMPREF9228_RS08570 d21b2f114da7e8f9784883c528541464 354 Gene3D G3DSA:3.60.140.10 321 353 1.9E-78 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase HMPREF9228_RS02420 0083ed702aeb75b9258d64873814df07 314 PANTHER PTHR33608 16 300 1.2E-26 T 22-04-2016 HMPREF9228_RS02420 0083ed702aeb75b9258d64873814df07 314 SUPERFAMILY SSF53300 83 216 8.12E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02420 0083ed702aeb75b9258d64873814df07 314 Pfam PF01882 Protein of unknown function DUF58 41 116 9.0E-16 T 22-04-2016 IPR002881 Domain of unknown function DUF58 HMPREF9228_RS03390 c8b92f6f39a8b6db6f49c2d44879a0d3 363 SUPERFAMILY SSF48576 42 355 1.52E-61 T 22-04-2016 IPR008949 Isoprenoid synthase domain HMPREF9228_RS03390 c8b92f6f39a8b6db6f49c2d44879a0d3 363 PANTHER PTHR12001:SF45 29 350 8.4E-45 T 22-04-2016 HMPREF9228_RS03390 c8b92f6f39a8b6db6f49c2d44879a0d3 363 Pfam PF00348 Polyprenyl synthetase 50 310 9.4E-54 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 HMPREF9228_RS03390 c8b92f6f39a8b6db6f49c2d44879a0d3 363 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 98 112 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 HMPREF9228_RS03390 c8b92f6f39a8b6db6f49c2d44879a0d3 363 Gene3D G3DSA:1.10.600.10 32 357 2.2E-75 T 22-04-2016 IPR008949 Isoprenoid synthase domain HMPREF9228_RS03390 c8b92f6f39a8b6db6f49c2d44879a0d3 363 PANTHER PTHR12001 29 350 8.4E-45 T 22-04-2016 IPR017446 Polyprenyl synthetase-related HMPREF9228_RS03390 c8b92f6f39a8b6db6f49c2d44879a0d3 363 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 240 252 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 266 282 7.5E-30 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 196 210 7.5E-30 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 300 7.5E-30 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 308 319 7.5E-30 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 235 249 7.5E-30 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 Pfam PF00117 Glutamine amidotransferase class-I 200 385 9.5E-37 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 SMART SM01097 5 135 9.4E-80 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00097 Anthranilate synthase component II signature 266 277 4.7E-5 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00097 Anthranilate synthase component II signature 362 375 4.7E-5 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00097 Anthranilate synthase component II signature 238 247 4.7E-5 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 134 3.7E-48 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 391 45.204 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 Gene3D G3DSA:3.50.30.20 6 141 4.2E-54 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PANTHER PTHR11405 5 390 8.5E-178 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00096 Glutamine amidotransferase superfamily signature 238 247 1.8E-10 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00096 Glutamine amidotransferase superfamily signature 266 277 1.8E-10 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 PRINTS PR00096 Glutamine amidotransferase superfamily signature 362 375 1.8E-10 T 22-04-2016 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 SUPERFAMILY SSF52021 6 142 2.48E-52 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 SUPERFAMILY SSF52317 187 389 5.92E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 Gene3D G3DSA:3.40.50.880 164 389 1.4E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS05975 494f9aaf7f89f25e96e4c56f37b27ae6 395 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 7 388 2.2E-130 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 SUPERFAMILY SSF102114 21 221 2.35E-38 T 22-04-2016 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 SUPERFAMILY SSF102114 251 365 2.35E-38 T 22-04-2016 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 14 402 1.4E-131 T 22-04-2016 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 Pfam PF04055 Radical SAM superfamily 20 176 1.6E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 Pfam PF13186 Iron-sulfur cluster-binding domain 296 356 5.4E-7 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 170 415 4.0E-11 T 22-04-2016 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 295 384 4.8E-18 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 PANTHER PTHR11228 1 220 1.1E-96 T 22-04-2016 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 PANTHER PTHR11228 253 394 1.1E-96 T 22-04-2016 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 Pfam PF13353 4Fe-4S single cluster domain 22 132 4.6E-5 T 22-04-2016 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 PANTHER PTHR11228:SF24 1 220 1.1E-96 T 22-04-2016 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 PANTHER PTHR11228:SF24 253 394 1.1E-96 T 22-04-2016 HMPREF9228_RS01700 5b637f0a2ac727b4f2316d686ce78735 430 Gene3D G3DSA:3.20.20.70 11 372 2.2E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS07180 4145e9ba6fc7cbdd83b38ad3b9f104ac 133 SUPERFAMILY SSF81593 1 121 5.1E-31 T 22-04-2016 HMPREF9228_RS07180 4145e9ba6fc7cbdd83b38ad3b9f104ac 133 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 3 123 4.6E-36 T 22-04-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 HMPREF9228_RS07180 4145e9ba6fc7cbdd83b38ad3b9f104ac 133 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 3 124 2.7E-52 T 22-04-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 HMPREF9228_RS07180 4145e9ba6fc7cbdd83b38ad3b9f104ac 133 Gene3D G3DSA:1.20.120.330 1 121 3.5E-35 T 22-04-2016 HMPREF9228_RS03995 6ff95503e1cb3573b9c9ff02d15f8f4f 475 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 23 443 3.0E-123 T 22-04-2016 IPR002618 UDPGP family GO:0008152|GO:0070569 HMPREF9228_RS03995 6ff95503e1cb3573b9c9ff02d15f8f4f 475 SUPERFAMILY SSF53448 67 441 1.61E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS03995 6ff95503e1cb3573b9c9ff02d15f8f4f 475 Gene3D G3DSA:3.90.550.10 22 388 4.7E-73 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS03995 6ff95503e1cb3573b9c9ff02d15f8f4f 475 PANTHER PTHR11952 73 443 4.6E-84 T 22-04-2016 IPR002618 UDPGP family GO:0008152|GO:0070569 HMPREF9228_RS03995 6ff95503e1cb3573b9c9ff02d15f8f4f 475 PANTHER PTHR11952:SF2 73 443 4.6E-84 T 22-04-2016 HMPREF9228_RS03995 6ff95503e1cb3573b9c9ff02d15f8f4f 475 PIRSF PIRSF000806 2 465 9.9E-113 T 22-04-2016 IPR016267 UTP--glucose-1-phosphate uridylyltransferase GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 HMPREF9228_RS09020 e419fe96af10f1f81ecdac2bf2fafd0b 343 PANTHER PTHR32196:SF35 15 339 9.9E-83 T 22-04-2016 HMPREF9228_RS09020 e419fe96af10f1f81ecdac2bf2fafd0b 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 324 7.3E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS09020 e419fe96af10f1f81ecdac2bf2fafd0b 343 PANTHER PTHR32196 15 339 9.9E-83 T 22-04-2016 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 PANTHER PTHR30146 1 323 1.2E-84 T 22-04-2016 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 Gene3D G3DSA:3.40.50.2300 49 172 1.0E-25 T 22-04-2016 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 SMART SM00354 1 68 4.7E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 PANTHER PTHR30146:SF34 1 323 1.2E-84 T 22-04-2016 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 2.0E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 Gene3D G3DSA:3.40.50.2300 173 305 1.2E-36 T 22-04-2016 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 Pfam PF13377 Periplasmic binding protein-like domain 165 324 1.8E-28 T 22-04-2016 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 SUPERFAMILY SSF47413 1 55 1.02E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 SUPERFAMILY SSF53822 59 321 5.89E-49 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS06635 7a25f06a2fe80fe10276d423bf1a2b7b 328 Gene3D G3DSA:1.10.260.40 1 48 3.8E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS02070 a4e98af031c652258b6ef78990b85c7a 88 PRINTS PR00171 Sugar transporter signature 46 67 7.1E-7 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 HMPREF9228_RS02070 a4e98af031c652258b6ef78990b85c7a 88 PRINTS PR00171 Sugar transporter signature 69 81 7.1E-7 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 HMPREF9228_RS02070 a4e98af031c652258b6ef78990b85c7a 88 Gene3D G3DSA:1.20.1250.20 1 87 9.7E-10 T 22-04-2016 HMPREF9228_RS02070 a4e98af031c652258b6ef78990b85c7a 88 PANTHER PTHR23500 1 87 1.3E-19 T 22-04-2016 HMPREF9228_RS02070 a4e98af031c652258b6ef78990b85c7a 88 SUPERFAMILY SSF103473 1 87 6.41E-12 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02070 a4e98af031c652258b6ef78990b85c7a 88 Pfam PF00083 Sugar (and other) transporter 1 86 1.0E-15 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 HMPREF9228_RS00300 b212b936fffd22358b84b4f52d1ff82c 372 PANTHER PTHR33393 8 316 2.8E-25 T 22-04-2016 HMPREF9228_RS00300 b212b936fffd22358b84b4f52d1ff82c 372 SUPERFAMILY SSF63817 90 236 2.22E-28 T 22-04-2016 IPR023365 Sortase domain HMPREF9228_RS00300 b212b936fffd22358b84b4f52d1ff82c 372 Pfam PF04203 Sortase family 103 235 1.4E-27 T 22-04-2016 IPR005754 Sortase family HMPREF9228_RS00300 b212b936fffd22358b84b4f52d1ff82c 372 Gene3D G3DSA:2.40.260.10 97 236 2.1E-24 T 22-04-2016 IPR023365 Sortase domain HMPREF9228_RS00300 b212b936fffd22358b84b4f52d1ff82c 372 TIGRFAM TIGR01076 sortase_fam: sortase 116 234 7.7E-11 T 22-04-2016 IPR005754 Sortase family HMPREF9228_RS00300 b212b936fffd22358b84b4f52d1ff82c 372 PANTHER PTHR33393:SF3 8 316 2.8E-25 T 22-04-2016 HMPREF9228_RS08115 adf25dd55801ff4688254511b77cdca6 123 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 10 123 6.3E-47 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08115 adf25dd55801ff4688254511b77cdca6 123 Gene3D G3DSA:3.30.420.100 27 122 1.1E-39 T 22-04-2016 HMPREF9228_RS08115 adf25dd55801ff4688254511b77cdca6 123 SUPERFAMILY SSF53137 10 121 3.92E-51 T 22-04-2016 HMPREF9228_RS08115 adf25dd55801ff4688254511b77cdca6 123 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 9 123 27.089 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08115 adf25dd55801ff4688254511b77cdca6 123 PANTHER PTHR12899 8 123 9.9E-42 T 22-04-2016 HMPREF9228_RS08115 adf25dd55801ff4688254511b77cdca6 123 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 11 123 1.3E-38 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS02100 39e25acd19c6f48d6fbb72dd7fbac921 332 PANTHER PTHR32243 40 332 3.3E-146 T 22-04-2016 HMPREF9228_RS02100 39e25acd19c6f48d6fbb72dd7fbac921 332 PANTHER PTHR32243:SF28 40 332 3.3E-146 T 22-04-2016 HMPREF9228_RS02100 39e25acd19c6f48d6fbb72dd7fbac921 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 141 320 3.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02100 39e25acd19c6f48d6fbb72dd7fbac921 332 Gene3D G3DSA:1.10.3720.10 53 319 2.3E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02100 39e25acd19c6f48d6fbb72dd7fbac921 332 SUPERFAMILY SSF161098 53 331 3.01E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06625 39e25acd19c6f48d6fbb72dd7fbac921 332 PANTHER PTHR32243 40 332 3.3E-146 T 22-04-2016 HMPREF9228_RS06625 39e25acd19c6f48d6fbb72dd7fbac921 332 PANTHER PTHR32243:SF28 40 332 3.3E-146 T 22-04-2016 HMPREF9228_RS06625 39e25acd19c6f48d6fbb72dd7fbac921 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 141 320 3.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06625 39e25acd19c6f48d6fbb72dd7fbac921 332 Gene3D G3DSA:1.10.3720.10 53 319 2.3E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06625 39e25acd19c6f48d6fbb72dd7fbac921 332 SUPERFAMILY SSF161098 53 331 3.01E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01160 76fbf5e0d05215f46cca20923961dc99 874 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 12 171 8.7E-36 T 22-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal HMPREF9228_RS01160 76fbf5e0d05215f46cca20923961dc99 874 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 499 695 3.1E-41 T 22-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal HMPREF9228_RS01160 76fbf5e0d05215f46cca20923961dc99 874 PANTHER PTHR30294:SF4 3 236 5.8E-75 T 22-04-2016 HMPREF9228_RS01160 76fbf5e0d05215f46cca20923961dc99 874 Pfam PF12698 ABC-2 family transporter protein 22 170 3.5E-9 T 22-04-2016 HMPREF9228_RS01160 76fbf5e0d05215f46cca20923961dc99 874 PANTHER PTHR30294:SF4 513 713 5.8E-75 T 22-04-2016 HMPREF9228_RS01160 76fbf5e0d05215f46cca20923961dc99 874 PANTHER PTHR30294 513 713 5.8E-75 T 22-04-2016 HMPREF9228_RS01160 76fbf5e0d05215f46cca20923961dc99 874 PANTHER PTHR30294 3 236 5.8E-75 T 22-04-2016 HMPREF9228_RS03970 2ddef7d07efc0005272863887e2ca0a3 239 PANTHER PTHR18901 4 233 1.2E-44 T 22-04-2016 HMPREF9228_RS03970 2ddef7d07efc0005272863887e2ca0a3 239 SUPERFAMILY SSF56784 7 234 6.27E-39 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS03970 2ddef7d07efc0005272863887e2ca0a3 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 202 8.8E-18 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS03970 2ddef7d07efc0005272863887e2ca0a3 239 Gene3D G3DSA:3.40.50.1000 79 232 3.0E-37 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS03970 2ddef7d07efc0005272863887e2ca0a3 239 Gene3D G3DSA:1.10.150.240 20 78 1.3E-20 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 HMPREF9228_RS03970 2ddef7d07efc0005272863887e2ca0a3 239 PANTHER PTHR18901:SF23 4 233 1.2E-44 T 22-04-2016 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 Gene3D G3DSA:2.40.30.10 305 398 6.0E-44 T 22-04-2016 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 Pfam PF03144 Elongation factor Tu domain 2 230 298 5.8E-15 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 SUPERFAMILY SSF50447 211 306 2.02E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 4.1E-58 T 22-04-2016 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 398 9.0E-203 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 399 57.546 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 PRINTS PR00315 GTP-binding elongation factor signature 96 107 3.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 PRINTS PR00315 GTP-binding elongation factor signature 80 90 3.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 PRINTS PR00315 GTP-binding elongation factor signature 60 68 3.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 PRINTS PR00315 GTP-binding elongation factor signature 133 142 3.2E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 164 1.2E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 SUPERFAMILY SSF52540 6 224 4.43E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 PANTHER PTHR23115:SF112 1 397 7.0E-222 T 22-04-2016 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 Pfam PF03143 Elongation factor Tu C-terminal domain 303 397 1.2E-30 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 PANTHER PTHR23115 1 397 7.0E-222 T 22-04-2016 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 Gene3D G3DSA:2.40.30.10 214 303 1.4E-34 T 22-04-2016 HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 SUPERFAMILY SSF50465 303 398 1.7E-33 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal HMPREF9228_RS06185 f3fb135fa8646373724ee0ad713d9df4 399 Gene3D G3DSA:3.40.50.300 3 213 8.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05025 9941b3f3e8792530c8c0e8ccb10382b9 290 PANTHER PTHR10534 4 265 3.2E-43 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 HMPREF9228_RS05025 9941b3f3e8792530c8c0e8ccb10382b9 290 Pfam PF08543 Phosphomethylpyrimidine kinase 36 265 6.4E-23 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 HMPREF9228_RS05025 9941b3f3e8792530c8c0e8ccb10382b9 290 SUPERFAMILY SSF53613 14 268 2.65E-53 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS05025 9941b3f3e8792530c8c0e8ccb10382b9 290 PANTHER PTHR10534:SF0 4 265 3.2E-43 T 22-04-2016 HMPREF9228_RS05025 9941b3f3e8792530c8c0e8ccb10382b9 290 Gene3D G3DSA:3.40.1190.20 14 285 5.7E-57 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS07200 a1d7ea922f308a3b218117c8f1bd4335 425 PANTHER PTHR34378:SF2 40 362 8.6E-47 T 22-04-2016 HMPREF9228_RS07200 a1d7ea922f308a3b218117c8f1bd4335 425 PIRSF PIRSF017901 6 400 4.2E-103 T 22-04-2016 HMPREF9228_RS07200 a1d7ea922f308a3b218117c8f1bd4335 425 PANTHER PTHR34378 40 362 8.6E-47 T 22-04-2016 HMPREF9228_RS07200 a1d7ea922f308a3b218117c8f1bd4335 425 SUPERFAMILY SSF55931 317 357 6.57E-30 T 22-04-2016 HMPREF9228_RS07200 a1d7ea922f308a3b218117c8f1bd4335 425 SUPERFAMILY SSF55931 37 272 6.57E-30 T 22-04-2016 HMPREF9228_RS07200 a1d7ea922f308a3b218117c8f1bd4335 425 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 80 350 2.1E-32 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 HMPREF9228_RS08085 b1416cb2a17dded939a6c05207ab1ccd 72 Gene3D G3DSA:2.40.50.140 1 72 4.0E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08085 b1416cb2a17dded939a6c05207ab1ccd 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.691 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 HMPREF9228_RS08085 b1416cb2a17dded939a6c05207ab1ccd 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.3E-28 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 HMPREF9228_RS08085 b1416cb2a17dded939a6c05207ab1ccd 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-35 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 HMPREF9228_RS08085 b1416cb2a17dded939a6c05207ab1ccd 72 PANTHER PTHR33370 1 72 2.0E-43 T 22-04-2016 HMPREF9228_RS08085 b1416cb2a17dded939a6c05207ab1ccd 72 SUPERFAMILY SSF50249 1 71 1.77E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08170 30247244b256672d4b24a80587b3f035 119 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 112 3.5E-37 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08170 30247244b256672d4b24a80587b3f035 119 Pfam PF00237 Ribosomal protein L22p/L17e 8 112 1.6E-29 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08170 30247244b256672d4b24a80587b3f035 119 PANTHER PTHR13501 1 112 2.5E-36 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08170 30247244b256672d4b24a80587b3f035 119 Gene3D G3DSA:3.90.470.10 1 116 4.7E-38 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08170 30247244b256672d4b24a80587b3f035 119 ProSitePatterns PS00464 Ribosomal protein L22 signature. 88 112 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08170 30247244b256672d4b24a80587b3f035 119 SUPERFAMILY SSF54843 1 116 4.45E-37 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08170 30247244b256672d4b24a80587b3f035 119 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 115 27.599 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08395 e074bbd245a864639f7164f85aaa57e0 201 PANTHER PTHR23407:SF1 1 196 3.3E-29 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase HMPREF9228_RS08395 e074bbd245a864639f7164f85aaa57e0 201 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 194 4.4E-28 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase HMPREF9228_RS08395 e074bbd245a864639f7164f85aaa57e0 201 SUPERFAMILY SSF100950 1 198 4.33E-34 T 22-04-2016 HMPREF9228_RS08395 e074bbd245a864639f7164f85aaa57e0 201 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 194 2.2E-25 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase HMPREF9228_RS08395 e074bbd245a864639f7164f85aaa57e0 201 Gene3D G3DSA:3.40.50.10420 2 198 7.8E-46 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain HMPREF9228_RS08395 e074bbd245a864639f7164f85aaa57e0 201 PANTHER PTHR23407 1 196 3.3E-29 T 22-04-2016 HMPREF9228_RS08395 e074bbd245a864639f7164f85aaa57e0 201 PIRSF PIRSF006806 1 197 9.2E-27 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 Pfam PF01966 HD domain 25 118 3.4E-6 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 277 617 1.5E-36 T 22-04-2016 IPR006474 Helicase Cas3, CRISPR-associated, core HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 Gene3D G3DSA:3.40.50.300 272 442 5.0E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 SUPERFAMILY SSF52540 272 596 2.41E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 SUPERFAMILY SSF109604 12 141 5.1E-7 T 22-04-2016 HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 SMART SM00487 246 461 4.0E-5 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 Gene3D G3DSA:1.10.3210.10 21 117 5.1E-6 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 24 215 3.2E-18 T 22-04-2016 IPR006483 CRISPR-associated Cas3-HD domain HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 Pfam PF00270 DEAD/DEAH box helicase 276 432 4.8E-12 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS07010 feabab63b867f04865c9800c0a8e2c29 812 Gene3D G3DSA:3.40.50.300 481 605 1.5E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03230 5cde49844f37241274fc3463693c8dfa 546 Gene3D G3DSA:3.40.190.10 206 325 1.8E-32 T 22-04-2016 HMPREF9228_RS03230 5cde49844f37241274fc3463693c8dfa 546 PIRSF PIRSF002741 1 534 4.8E-82 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 HMPREF9228_RS03230 5cde49844f37241274fc3463693c8dfa 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 461 1.6E-69 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain HMPREF9228_RS03230 5cde49844f37241274fc3463693c8dfa 546 Gene3D G3DSA:3.10.105.10 326 516 1.7E-47 T 22-04-2016 HMPREF9228_RS03230 5cde49844f37241274fc3463693c8dfa 546 PANTHER PTHR30290 1 543 6.3E-113 T 22-04-2016 HMPREF9228_RS03230 5cde49844f37241274fc3463693c8dfa 546 Gene3D G3DSA:3.90.76.10 51 205 9.0E-37 T 22-04-2016 HMPREF9228_RS03230 5cde49844f37241274fc3463693c8dfa 546 PANTHER PTHR30290:SF10 1 543 6.3E-113 T 22-04-2016 HMPREF9228_RS03230 5cde49844f37241274fc3463693c8dfa 546 SUPERFAMILY SSF53850 38 538 2.35E-103 T 22-04-2016 HMPREF9228_RS04590 102979ddc606fd775b5773ef80c84bea 259 SUPERFAMILY SSF52540 4 234 7.51E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04590 102979ddc606fd775b5773ef80c84bea 259 Gene3D G3DSA:3.40.50.300 3 235 7.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04590 102979ddc606fd775b5773ef80c84bea 259 Pfam PF00005 ABC transporter 23 174 2.3E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04590 102979ddc606fd775b5773ef80c84bea 259 SMART SM00382 32 233 5.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS04590 102979ddc606fd775b5773ef80c84bea 259 PANTHER PTHR24220:SF85 5 245 5.1E-117 T 22-04-2016 HMPREF9228_RS04590 102979ddc606fd775b5773ef80c84bea 259 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 246 1.5E-99 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 HMPREF9228_RS04590 102979ddc606fd775b5773ef80c84bea 259 PANTHER PTHR24220 5 245 5.1E-117 T 22-04-2016 HMPREF9228_RS05670 805fee69e8e9be1d067b44bab15d4cda 83 Gene3D G3DSA:3.30.420.10 2 72 4.7E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05670 805fee69e8e9be1d067b44bab15d4cda 83 SUPERFAMILY SSF53098 10 78 5.31E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05670 805fee69e8e9be1d067b44bab15d4cda 83 Pfam PF13333 Integrase core domain 23 77 7.1E-7 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS04870 22127de3fd8ab026b01ac80aa00ada3d 110 SUPERFAMILY SSF53067 14 105 5.83E-8 T 22-04-2016 HMPREF9228_RS04870 22127de3fd8ab026b01ac80aa00ada3d 110 Gene3D G3DSA:3.30.420.40 14 72 6.1E-9 T 22-04-2016 HMPREF9228_RS04870 22127de3fd8ab026b01ac80aa00ada3d 110 Pfam PF00480 ROK family 17 76 4.7E-5 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 422 846 1.4E-203 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 PANTHER PTHR30557 274 379 0.0 T 22-04-2016 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 PANTHER PTHR30557 416 861 0.0 T 22-04-2016 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 PANTHER PTHR30557 893 913 0.0 T 22-04-2016 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 Pfam PF13667 ThiC-associated domain 327 381 1.3E-6 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 Pfam PF01964 Radical SAM ThiC family 423 843 9.1E-196 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 Gene3D G3DSA:3.20.20.70 6 239 8.4E-57 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 422 849 54.589 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 Pfam PF02581 Thiamine monophosphate synthase/TENI 19 219 7.1E-47 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 SUPERFAMILY SSF51391 11 238 1.12E-41 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 16 237 20.496 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 PANTHER PTHR30557:SF1 274 379 0.0 T 22-04-2016 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 PANTHER PTHR30557:SF1 416 861 0.0 T 22-04-2016 HMPREF9228_RS02695 37954e1553a33e13ca5d00e10215aa4d 918 PANTHER PTHR30557:SF1 893 913 0.0 T 22-04-2016 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 Gene3D G3DSA:3.30.1120.10 397 451 1.6E-12 T 22-04-2016 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 Gene3D G3DSA:3.40.720.10 14 396 1.9E-83 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 PANTHER PTHR10342 5 223 1.5E-93 T 22-04-2016 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 PANTHER PTHR10342 239 474 1.5E-93 T 22-04-2016 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 SUPERFAMILY SSF53649 15 450 6.83E-99 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 Pfam PF16347 Domain of unknown function (DUF4976) 396 447 4.5E-7 T 22-04-2016 IPR032506 Domain of unknown function DUF4976 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 Pfam PF00884 Sulfatase 16 356 3.1E-50 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 PANTHER PTHR10342:SF199 5 223 1.5E-93 T 22-04-2016 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 PANTHER PTHR10342:SF199 239 474 1.5E-93 T 22-04-2016 HMPREF9228_RS01710 78b8be35a468128a154e41444ec97195 489 ProSitePatterns PS00523 Sulfatases signature 1. 61 73 - T 22-04-2016 IPR024607 Sulfatase, conserved site HMPREF9228_RS02410 577648522cf4a5b52d41b61f30d425be 352 Pfam PF13519 von Willebrand factor type A domain 98 180 3.0E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02410 577648522cf4a5b52d41b61f30d425be 352 SUPERFAMILY SSF53300 95 163 1.57E-11 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02410 577648522cf4a5b52d41b61f30d425be 352 SUPERFAMILY SSF53300 200 311 1.57E-11 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02410 577648522cf4a5b52d41b61f30d425be 352 Gene3D G3DSA:3.40.50.410 182 310 3.4E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02410 577648522cf4a5b52d41b61f30d425be 352 Gene3D G3DSA:3.40.50.410 94 150 3.4E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 Gene3D G3DSA:1.10.10.60 232 279 1.9E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 Gene3D G3DSA:1.10.10.60 175 231 5.4E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 Pfam PF12833 Helix-turn-helix domain 202 278 4.7E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 PANTHER PTHR11019:SF65 163 286 4.7E-23 T 22-04-2016 HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 SUPERFAMILY SSF46689 231 279 2.28E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 PANTHER PTHR11019 163 286 4.7E-23 T 22-04-2016 HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 SMART SM00342 195 278 5.7E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 Gene3D G3DSA:2.60.120.10 26 81 1.2E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 Pfam PF07883 Cupin domain 31 82 2.0E-6 T 22-04-2016 IPR013096 Cupin 2, conserved barrel HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 SUPERFAMILY SSF51182 30 82 8.12E-7 T 22-04-2016 IPR011051 RmlC-like cupin domain HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS02490 a6e555cdbf438a9fccdab311b7e9da1e 289 SUPERFAMILY SSF46689 178 229 3.72E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 PANTHER PTHR24423 1 495 8.0E-85 T 22-04-2016 HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 SUPERFAMILY SSF55874 349 485 3.14E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 PANTHER PTHR24423:SF472 1 495 8.0E-85 T 22-04-2016 HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 Pfam PF12282 Signal transduction histidine kinase 5 142 8.8E-40 T 22-04-2016 IPR022066 Signal transduction histidine kinase HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 Gene3D G3DSA:3.30.565.10 345 490 7.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 Gene3D G3DSA:3.30.450.20 249 286 1.5E-4 T 22-04-2016 HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 SMART SM00387 387 491 1.1E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 SUPERFAMILY SSF55785 235 284 3.49E-5 T 22-04-2016 IPR000014 PAS domain HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 Pfam PF08448 PAS fold 173 278 8.8E-7 T 22-04-2016 IPR013656 PAS fold-4 HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 489 4.3E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05440 eb08b03eaf80d96dde92fe4bb44acef5 495 Pfam PF07568 Histidine kinase 292 362 6.1E-25 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 PANTHER PTHR11647:SF70 446 503 1.7E-98 T 22-04-2016 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 PANTHER PTHR11647:SF70 130 398 1.7E-98 T 22-04-2016 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 PANTHER PTHR11647:SF70 2 112 1.7E-98 T 22-04-2016 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 PANTHER PTHR11647 446 503 1.7E-98 T 22-04-2016 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 PANTHER PTHR11647 130 398 1.7E-98 T 22-04-2016 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 PANTHER PTHR11647 2 112 1.7E-98 T 22-04-2016 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 Pfam PF01979 Amidohydrolase family 48 393 7.2E-17 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 SUPERFAMILY SSF51556 51 396 2.4E-81 T 22-04-2016 IPR032466 Metal-dependent hydrolase HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 Gene3D G3DSA:3.20.20.140 472 493 2.9E-105 T 22-04-2016 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 Gene3D G3DSA:3.20.20.140 41 424 2.9E-105 T 22-04-2016 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 504 32.044 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 SUPERFAMILY SSF51338 454 501 2.88E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 SUPERFAMILY SSF51338 17 52 2.88E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 ProSitePatterns PS00482 Dihydroorotase signature 1. 54 62 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04290 d953b2356fe78eed6cfbf45c44ef2500 504 ProSitePatterns PS00483 Dihydroorotase signature 2. 333 344 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS06480 9a7d6ce4b0a133ee80fbbcc92d941b39 443 PANTHER PTHR30061 1 440 1.5E-78 T 22-04-2016 HMPREF9228_RS06480 9a7d6ce4b0a133ee80fbbcc92d941b39 443 Gene3D G3DSA:3.40.190.10 33 143 4.9E-17 T 22-04-2016 HMPREF9228_RS06480 9a7d6ce4b0a133ee80fbbcc92d941b39 443 Pfam PF01547 Bacterial extracellular solute-binding protein 45 330 2.8E-35 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 HMPREF9228_RS06480 9a7d6ce4b0a133ee80fbbcc92d941b39 443 PANTHER PTHR30061:SF25 1 440 1.5E-78 T 22-04-2016 HMPREF9228_RS06480 9a7d6ce4b0a133ee80fbbcc92d941b39 443 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 139 156 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 HMPREF9228_RS06480 9a7d6ce4b0a133ee80fbbcc92d941b39 443 Gene3D G3DSA:3.40.190.10 145 350 2.6E-39 T 22-04-2016 HMPREF9228_RS06480 9a7d6ce4b0a133ee80fbbcc92d941b39 443 SUPERFAMILY SSF53850 21 433 1.71E-67 T 22-04-2016 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 PANTHER PTHR31829 7 291 4.3E-206 T 22-04-2016 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 Pfam PF01680 SOR/SNZ family 7 211 2.1E-106 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 PIRSF PIRSF029271 1 291 2.9E-143 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 8 284 4.9E-145 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 ProSitePatterns PS01235 PdxS/SNZ family signature. 204 222 - T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 3 291 49.267 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 SUPERFAMILY SSF51366 17 267 8.47E-63 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 Gene3D G3DSA:3.20.20.70 21 159 3.4E-50 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS06525 cce3fe2d9f6ed54e3daf31a67df63e8c 291 Gene3D G3DSA:3.20.20.70 191 278 3.4E-50 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS07920 e89b38cc017dc406061c5bd57e6e0d40 356 Gene3D G3DSA:3.90.1200.10 115 342 1.6E-12 T 22-04-2016 HMPREF9228_RS07920 e89b38cc017dc406061c5bd57e6e0d40 356 Pfam PF01636 Phosphotransferase enzyme family 24 252 8.6E-23 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase HMPREF9228_RS07920 e89b38cc017dc406061c5bd57e6e0d40 356 SUPERFAMILY SSF56112 5 341 2.19E-35 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 156 177 9.6E-13 T 22-04-2016 HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 82 104 9.6E-13 T 22-04-2016 HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 PANTHER PTHR24093 25 269 9.2E-63 T 22-04-2016 HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 SUPERFAMILY SSF81660 170 274 6.76E-20 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 Pfam PF00689 Cation transporting ATPase, C-terminus 250 306 6.4E-10 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 Gene3D G3DSA:1.20.1110.10 261 312 1.6E-9 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 Gene3D G3DSA:1.20.1110.10 25 260 5.8E-44 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 SUPERFAMILY SSF81665 63 157 1.29E-24 T 22-04-2016 HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 46 184 1.0E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 Pfam PF00122 E1-E2 ATPase 29 154 1.5E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 165 171 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 PANTHER PTHR24093:SF268 25 269 9.2E-63 T 22-04-2016 HMPREF9228_RS04810 53e5960158518ac234d1198cc9965736 316 SUPERFAMILY SSF81653 24 61 8.11E-5 T 22-04-2016 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.8E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 Gene3D G3DSA:3.40.190.10 88 180 4.2E-18 T 22-04-2016 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 PANTHER PTHR30346 1 288 1.6E-61 T 22-04-2016 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 SUPERFAMILY SSF46785 1 86 2.49E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 Gene3D G3DSA:1.10.10.10 1 84 2.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 SUPERFAMILY SSF53850 88 287 1.92E-29 T 22-04-2016 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 Gene3D G3DSA:3.40.190.10 181 259 6.8E-9 T 22-04-2016 HMPREF9228_RS06055 3b9f728d4e821ee48b980d304e72e9c7 288 Pfam PF03466 LysR substrate binding domain 87 287 8.2E-31 T 22-04-2016 IPR005119 LysR, substrate-binding HMPREF9228_RS06100 04c510381c3682314fb8a9a76f06f287 308 SUPERFAMILY SSF161098 59 239 2.35E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06100 04c510381c3682314fb8a9a76f06f287 308 Gene3D G3DSA:1.10.3720.10 54 254 9.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06100 04c510381c3682314fb8a9a76f06f287 308 PANTHER PTHR30465 4 268 2.8E-75 T 22-04-2016 HMPREF9228_RS06100 04c510381c3682314fb8a9a76f06f287 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 266 4.4E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06100 04c510381c3682314fb8a9a76f06f287 308 PANTHER PTHR30465:SF26 4 268 2.8E-75 T 22-04-2016 HMPREF9228_RS07130 032ac3fdd7493215f980b9fe567aefbb 177 Gene3D G3DSA:1.10.10.10 8 141 6.3E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07130 032ac3fdd7493215f980b9fe567aefbb 177 Pfam PF01047 MarR family 47 91 1.5E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07130 032ac3fdd7493215f980b9fe567aefbb 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 3.6E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07130 032ac3fdd7493215f980b9fe567aefbb 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 3.6E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07130 032ac3fdd7493215f980b9fe567aefbb 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 3.6E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07130 032ac3fdd7493215f980b9fe567aefbb 177 SMART SM00347 25 127 1.5E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS07130 032ac3fdd7493215f980b9fe567aefbb 177 SUPERFAMILY SSF46785 29 139 2.13E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07130 032ac3fdd7493215f980b9fe567aefbb 177 PANTHER PTHR33164 39 151 8.8E-14 T 22-04-2016 HMPREF9228_RS00565 9c4d17935df9daf925e276699cbebc0c 413 SUPERFAMILY SSF53850 41 383 1.24E-40 T 22-04-2016 HMPREF9228_RS00565 9c4d17935df9daf925e276699cbebc0c 413 Gene3D G3DSA:3.40.190.10 39 171 3.9E-16 T 22-04-2016 HMPREF9228_RS00565 9c4d17935df9daf925e276699cbebc0c 413 Gene3D G3DSA:3.40.190.10 172 339 3.8E-24 T 22-04-2016 HMPREF9228_RS00565 9c4d17935df9daf925e276699cbebc0c 413 PANTHER PTHR30061 1 408 1.1E-30 T 22-04-2016 HMPREF9228_RS08435 64c69d3f182eb32d99c26d02f108d752 263 Gene3D G3DSA:3.40.50.1820 192 251 3.1E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS08435 64c69d3f182eb32d99c26d02f108d752 263 Gene3D G3DSA:3.40.50.1820 24 150 3.1E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS08435 64c69d3f182eb32d99c26d02f108d752 263 SUPERFAMILY SSF53474 21 153 2.71E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS08435 64c69d3f182eb32d99c26d02f108d752 263 SUPERFAMILY SSF53474 193 245 2.71E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS01445 082a147d2aa10b2712a0a9380c163c67 109 Pfam PF01063 Amino-transferase class IV 20 97 5.7E-8 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 HMPREF9228_RS01445 082a147d2aa10b2712a0a9380c163c67 109 Gene3D G3DSA:3.30.470.10 2 96 8.9E-17 T 22-04-2016 HMPREF9228_RS01445 082a147d2aa10b2712a0a9380c163c67 109 SUPERFAMILY SSF56752 3 89 4.19E-14 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 HMPREF9228_RS04760 f5c458666e098c9f18be2162d4ccd920 207 SUPERFAMILY SSF52317 23 170 6.87E-22 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS04760 f5c458666e098c9f18be2162d4ccd920 207 Gene3D G3DSA:3.40.50.880 4 205 3.4E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS04760 f5c458666e098c9f18be2162d4ccd920 207 Pfam PF03575 Peptidase family S51 10 205 2.8E-44 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 HMPREF9228_RS04760 f5c458666e098c9f18be2162d4ccd920 207 PANTHER PTHR20842 19 164 3.0E-38 T 22-04-2016 HMPREF9228_RS03320 ddc3c9f97b5b3ebf3a90d85fbaf03393 249 PANTHER PTHR39560 19 233 2.1E-17 T 22-04-2016 HMPREF9228_RS03320 ddc3c9f97b5b3ebf3a90d85fbaf03393 249 SUPERFAMILY SSF140931 67 242 3.92E-22 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS03320 ddc3c9f97b5b3ebf3a90d85fbaf03393 249 PANTHER PTHR39560:SF1 19 233 2.1E-17 T 22-04-2016 HMPREF9228_RS03320 ddc3c9f97b5b3ebf3a90d85fbaf03393 249 Gene3D G3DSA:1.10.3290.10 56 233 6.0E-29 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS03320 ddc3c9f97b5b3ebf3a90d85fbaf03393 249 Pfam PF02661 Fic/DOC family 81 186 5.8E-11 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS05235 e737f55805d2f0322df3af53f2684669 556 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 250 552 2.9E-113 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 HMPREF9228_RS05235 e737f55805d2f0322df3af53f2684669 556 PANTHER PTHR23406:SF3 458 556 1.1E-46 T 22-04-2016 HMPREF9228_RS05235 e737f55805d2f0322df3af53f2684669 556 PANTHER PTHR23406 458 556 1.1E-46 T 22-04-2016 HMPREF9228_RS05235 e737f55805d2f0322df3af53f2684669 556 SUPERFAMILY SSF53659 238 555 8.22E-94 T 22-04-2016 HMPREF9228_RS05235 e737f55805d2f0322df3af53f2684669 556 Gene3D G3DSA:3.40.50.10750 369 528 1.2E-63 T 22-04-2016 HMPREF9228_RS05235 e737f55805d2f0322df3af53f2684669 556 Pfam PF01515 Phosphate acetyl/butaryl transferase 239 552 7.2E-116 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 SMART SM00382 33 222 5.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 SMART SM00382 282 476 7.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 PANTHER PTHR24220:SF416 10 382 3.5E-154 T 22-04-2016 HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 Pfam PF00005 ABC transporter 24 174 3.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 Pfam PF00005 ABC transporter 276 427 4.3E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 SUPERFAMILY SSF52540 274 482 3.68E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 Gene3D G3DSA:3.40.50.300 6 241 3.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 Gene3D G3DSA:3.40.50.300 275 498 4.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 PANTHER PTHR24220 10 382 3.5E-154 T 22-04-2016 HMPREF9228_RS09570 15bda6d5fa2419dfa847217581d8efd8 521 SUPERFAMILY SSF52540 7 233 2.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08485 fa00fcb5d2fcfeff5e8dec269dc76611 410 Gene3D G3DSA:3.20.20.70 62 408 6.2E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS08485 fa00fcb5d2fcfeff5e8dec269dc76611 410 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 61 408 6.6E-142 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 HMPREF9228_RS08485 fa00fcb5d2fcfeff5e8dec269dc76611 410 Pfam PF00793 DAHP synthetase I family 98 397 1.6E-90 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 HMPREF9228_RS08485 fa00fcb5d2fcfeff5e8dec269dc76611 410 SUPERFAMILY SSF51569 61 407 4.81E-123 T 22-04-2016 HMPREF9228_RS08485 fa00fcb5d2fcfeff5e8dec269dc76611 410 PANTHER PTHR21225 34 408 9.4E-194 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 HMPREF9228_RS01600 c0a6dcc5cf930916cecddb2122067821 234 PANTHER PTHR38814 1 234 3.4E-93 T 22-04-2016 HMPREF9228_RS01600 c0a6dcc5cf930916cecddb2122067821 234 PANTHER PTHR38814:SF2 1 234 3.4E-93 T 22-04-2016 HMPREF9228_RS01600 c0a6dcc5cf930916cecddb2122067821 234 Pfam PF01939 Protein of unknown function DUF91 2 234 8.5E-59 T 22-04-2016 IPR002793 Endonuclease NucS HMPREF9228_RS01600 c0a6dcc5cf930916cecddb2122067821 234 Hamap MF_00722 Endonuclease NucS [nucS]. 1 226 30.184 T 22-04-2016 IPR002793 Endonuclease NucS HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 234 270 2.9E-12 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 PANTHER PTHR11938:SF4 68 270 3.2E-22 T 22-04-2016 HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 PIRSF PIRSF006816 22 274 3.6E-55 T 22-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 PANTHER PTHR11938 68 270 3.2E-22 T 22-04-2016 HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 Gene3D G3DSA:3.40.50.80 117 232 2.6E-19 T 22-04-2016 HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 SUPERFAMILY SSF52343 111 270 4.71E-23 T 22-04-2016 HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 SUPERFAMILY SSF63380 23 116 5.38E-19 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 Gene3D G3DSA:2.10.240.10 234 272 2.1E-14 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 HMPREF9228_RS04280 28538177d7ab71a8fc72e8b7e715c2b6 274 Gene3D G3DSA:2.40.30.10 24 114 1.6E-23 T 22-04-2016 HMPREF9228_RS05325 205537f46527c67cf6033aa82fbb4ceb 328 Pfam PF03741 Integral membrane protein TerC family 71 273 1.7E-50 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 HMPREF9228_RS05325 205537f46527c67cf6033aa82fbb4ceb 328 PANTHER PTHR30238 3 328 2.1E-128 T 22-04-2016 HMPREF9228_RS05325 205537f46527c67cf6033aa82fbb4ceb 328 PANTHER PTHR30238:SF0 3 328 2.1E-128 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 HMPREF9228_RS05325 205537f46527c67cf6033aa82fbb4ceb 328 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 320 4.5E-112 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 HMPREF9228_RS00235 1e3c8322e4740feed05c34c650543d22 329 PANTHER PTHR37044 163 287 5.1E-18 T 22-04-2016 HMPREF9228_RS00235 1e3c8322e4740feed05c34c650543d22 329 SUPERFAMILY SSF52980 166 277 2.95E-7 T 22-04-2016 IPR011335 Restriction endonuclease type II-like HMPREF9228_RS01750 f97ff8cf43d59c27470b258c34c62a55 184 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 140 146 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 HMPREF9228_RS01750 f97ff8cf43d59c27470b258c34c62a55 184 SUPERFAMILY SSF46767 84 172 1.1E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 HMPREF9228_RS01750 f97ff8cf43d59c27470b258c34c62a55 184 SUPERFAMILY SSF53155 6 89 2.63E-14 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 HMPREF9228_RS01750 f97ff8cf43d59c27470b258c34c62a55 184 PANTHER PTHR10815:SF5 1 182 3.8E-44 T 22-04-2016 HMPREF9228_RS01750 f97ff8cf43d59c27470b258c34c62a55 184 Gene3D G3DSA:1.10.10.10 84 174 1.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS01750 f97ff8cf43d59c27470b258c34c62a55 184 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 86 171 4.7E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 HMPREF9228_RS01750 f97ff8cf43d59c27470b258c34c62a55 184 PANTHER PTHR10815 1 182 3.8E-44 T 22-04-2016 HMPREF9228_RS01750 f97ff8cf43d59c27470b258c34c62a55 184 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 85 169 1.8E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 HMPREF9228_RS00335 152791ece4a945779991a865650da389 174 SUPERFAMILY SSF49879 58 173 4.02E-26 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 HMPREF9228_RS00335 152791ece4a945779991a865650da389 174 PANTHER PTHR21712:SF36 79 156 7.3E-16 T 22-04-2016 HMPREF9228_RS00335 152791ece4a945779991a865650da389 174 Gene3D G3DSA:2.60.200.20 81 173 4.9E-28 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS00335 152791ece4a945779991a865650da389 174 SMART SM00240 100 152 4.7E-10 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS00335 152791ece4a945779991a865650da389 174 PANTHER PTHR21712 79 156 7.3E-16 T 22-04-2016 HMPREF9228_RS00335 152791ece4a945779991a865650da389 174 Pfam PF00498 FHA domain 103 166 2.7E-17 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS08860 033ccaaa38ed47e00feda26c409d9b95 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 61 6.6E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS08860 033ccaaa38ed47e00feda26c409d9b95 235 PANTHER PTHR30055 8 231 1.0E-21 T 22-04-2016 HMPREF9228_RS08860 033ccaaa38ed47e00feda26c409d9b95 235 SUPERFAMILY SSF46689 3 68 8.21E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS08860 033ccaaa38ed47e00feda26c409d9b95 235 Gene3D G3DSA:1.10.357.10 3 189 1.9E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS00925 75704e79e0d531c0b5169afe83425d72 209 PANTHER PTHR30146 11 155 5.0E-28 T 22-04-2016 HMPREF9228_RS00925 75704e79e0d531c0b5169afe83425d72 209 SUPERFAMILY SSF47413 12 67 6.65E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00925 75704e79e0d531c0b5169afe83425d72 209 SUPERFAMILY SSF53822 69 160 2.36E-11 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS00925 75704e79e0d531c0b5169afe83425d72 209 Gene3D G3DSA:1.10.260.40 12 63 7.1E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00925 75704e79e0d531c0b5169afe83425d72 209 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 58 4.0E-9 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00925 75704e79e0d531c0b5169afe83425d72 209 Gene3D G3DSA:3.40.50.2300 64 156 5.3E-16 T 22-04-2016 HMPREF9228_RS00925 75704e79e0d531c0b5169afe83425d72 209 SMART SM00354 11 81 2.2E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 SUPERFAMILY SSF52540 218 419 6.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 PANTHER PTHR11564 113 421 1.5E-110 T 22-04-2016 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 SMART SM00382 220 366 9.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 Gene3D G3DSA:3.40.50.300 216 420 1.1E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 Pfam PF00448 SRP54-type protein, GTPase domain 222 420 8.5E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 148 419 1.6E-98 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 Pfam PF02881 SRP54-type protein, helical bundle domain 135 199 1.9E-7 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 PANTHER PTHR11564:SF16 113 421 1.5E-110 T 22-04-2016 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 Gene3D G3DSA:1.20.120.140 126 203 1.8E-13 T 22-04-2016 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 SUPERFAMILY SSF47364 119 197 1.44E-15 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 SMART SM00962 221 421 2.0E-108 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 394 407 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 146 421 58.364 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 HMPREF9228_RS01215 04425748fae8f3db0c453625efed0bfb 421 SMART SM00963 123 203 3.8E-10 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 PANTHER PTHR24096 17 605 2.7E-162 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 Gene3D G3DSA:3.30.300.30 467 590 8.0E-6 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 PANTHER PTHR24096:SF193 17 605 2.7E-162 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 Gene3D G3DSA:3.40.50.980 191 284 2.6E-29 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 Gene3D G3DSA:3.40.50.980 335 401 2.6E-29 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 Pfam PF00501 AMP-binding enzyme 24 469 1.4E-88 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 Gene3D G3DSA:2.30.38.10 407 463 2.6E-17 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 Gene3D G3DSA:3.40.50.980 15 190 5.9E-32 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 SUPERFAMILY SSF56801 16 289 1.96E-115 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 SUPERFAMILY SSF56801 338 597 1.96E-115 T 22-04-2016 HMPREF9228_RS03715 27eea542abd438ff99238c958b6b20fa 693 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 22-04-2016 IPR020845 AMP-binding, conserved site HMPREF9228_RS09720 b9df90e5c7111e1381a4a093dfeac7c1 323 ProSitePatterns PS00893 Nudix box signature. 216 237 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 HMPREF9228_RS09720 b9df90e5c7111e1381a4a093dfeac7c1 323 SUPERFAMILY SSF55811 184 315 3.52E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS09720 b9df90e5c7111e1381a4a093dfeac7c1 323 PANTHER PTHR22769:SF37 186 310 2.6E-22 T 22-04-2016 HMPREF9228_RS09720 b9df90e5c7111e1381a4a093dfeac7c1 323 Gene3D G3DSA:3.90.79.10 185 314 8.2E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS09720 b9df90e5c7111e1381a4a093dfeac7c1 323 PANTHER PTHR22769 186 310 2.6E-22 T 22-04-2016 HMPREF9228_RS09720 b9df90e5c7111e1381a4a093dfeac7c1 323 PRINTS PR00502 NUDIX hydrolase family signature 211 225 1.9E-6 T 22-04-2016 IPR020476 NUDIX hydrolase HMPREF9228_RS09720 b9df90e5c7111e1381a4a093dfeac7c1 323 PRINTS PR00502 NUDIX hydrolase family signature 225 240 1.9E-6 T 22-04-2016 IPR020476 NUDIX hydrolase HMPREF9228_RS09720 b9df90e5c7111e1381a4a093dfeac7c1 323 Pfam PF00293 NUDIX domain 184 306 1.1E-23 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 HMPREF9228_RS03480 772424c307fccec1e00a3cf067e47fc9 306 SUPERFAMILY SSF140931 103 277 2.09E-33 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS03480 772424c307fccec1e00a3cf067e47fc9 306 PANTHER PTHR13504 1 279 3.7E-36 T 22-04-2016 HMPREF9228_RS03480 772424c307fccec1e00a3cf067e47fc9 306 Gene3D G3DSA:1.10.3290.10 30 279 4.9E-56 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS03480 772424c307fccec1e00a3cf067e47fc9 306 Pfam PF02661 Fic/DOC family 124 221 6.4E-18 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 8.6E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 Gene3D G3DSA:3.40.50.2300 59 186 6.3E-18 T 22-04-2016 HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 PANTHER PTHR30146 8 337 2.2E-83 T 22-04-2016 HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 Gene3D G3DSA:3.40.50.2300 187 321 3.9E-39 T 22-04-2016 HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 SMART SM00354 8 78 2.8E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 SUPERFAMILY SSF53822 68 337 5.44E-51 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 Gene3D G3DSA:1.10.260.40 7 58 1.8E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 Pfam PF13377 Periplasmic binding protein-like domain 183 337 7.7E-28 T 22-04-2016 HMPREF9228_RS08535 410ab8d3d26fdba8766ee6ed6b15c47d 338 SUPERFAMILY SSF47413 7 65 5.89E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 PANTHER PTHR11751 120 143 1.1E-18 T 22-04-2016 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 PANTHER PTHR11751 1 70 1.1E-18 T 22-04-2016 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 Gene3D G3DSA:1.10.10.10 3 61 2.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 PANTHER PTHR11751:SF333 120 143 1.1E-18 T 22-04-2016 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 PANTHER PTHR11751:SF333 1 70 1.1E-18 T 22-04-2016 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 Gene3D G3DSA:3.40.1410.10 62 235 2.1E-33 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 67 3.8E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 2.8E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 2.8E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 SMART SM00866 93 232 3.8E-15 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 SUPERFAMILY SSF46785 3 69 2.06E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 Pfam PF07702 UTRA domain 94 227 2.2E-23 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 SUPERFAMILY SSF64288 56 235 2.04E-29 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain HMPREF9228_RS09595 e511ee409a098805185ec0f9e09724de 246 SMART SM00345 11 68 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 Gene3D G3DSA:3.40.1380.10 63 196 4.3E-33 T 22-04-2016 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.0E-24 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 PRINTS PR00126 ATP synthase gamma subunit signature 249 268 1.0E-24 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 PRINTS PR00126 ATP synthase gamma subunit signature 280 301 1.0E-24 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 PRINTS PR00126 ATP synthase gamma subunit signature 170 187 1.0E-24 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 Gene3D G3DSA:1.10.287.80 217 250 4.4E-21 T 22-04-2016 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 Gene3D G3DSA:1.10.287.80 19 60 4.4E-21 T 22-04-2016 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 PANTHER PTHR11693 7 304 5.6E-66 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 302 28.534 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 6 302 2.2E-74 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 Gene3D G3DSA:1.10.287.80 251 297 8.4E-24 T 22-04-2016 HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 SUPERFAMILY SSF52943 6 302 7.46E-70 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain HMPREF9228_RS01585 1c46f5e3beaae7afc1f066c429c94fd2 307 Pfam PF00231 ATP synthase 6 302 1.8E-72 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 SMART SM00518 5 282 1.9E-75 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 178 185 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 PANTHER PTHR21445 4 284 7.9E-79 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 5 279 4.7E-75 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 Hamap MF_00152 Probable endonuclease 4 [nfo]. 4 282 33.841 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 Pfam PF01261 Xylose isomerase-like TIM barrel 26 239 1.2E-30 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 PANTHER PTHR21445:SF0 4 284 7.9E-79 T 22-04-2016 HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 Gene3D G3DSA:3.20.20.150 5 283 3.2E-92 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain HMPREF9228_RS03890 592413664b74d4ca1a2619bb165bfab4 284 SUPERFAMILY SSF51658 4 283 3.4E-74 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 Hamap MF_00258 Glutamate racemase [murI]. 5 264 31.347 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 PANTHER PTHR21198 1 261 1.1E-67 T 22-04-2016 HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 PANTHER PTHR21198:SF3 1 261 1.1E-67 T 22-04-2016 HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 SUPERFAMILY SSF53681 118 261 6.1E-23 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 256 3.3E-59 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 2.9E-24 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 71 79 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 SUPERFAMILY SSF53681 6 105 3.6E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS05905 fede162d59880be445b79db8c7c7a8e6 264 Gene3D G3DSA:3.40.50.1860 4 179 6.7E-49 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS04680 a57a89a298cb82f2d25add1122bfdb5c 200 SUPERFAMILY SSF54001 20 140 3.78E-23 T 22-04-2016 HMPREF9228_RS04680 a57a89a298cb82f2d25add1122bfdb5c 200 Pfam PF01841 Transglutaminase-like superfamily 30 136 8.1E-14 T 22-04-2016 IPR002931 Transglutaminase-like HMPREF9228_RS04680 a57a89a298cb82f2d25add1122bfdb5c 200 SMART SM00460 72 138 2.9E-4 T 22-04-2016 IPR002931 Transglutaminase-like HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 SUPERFAMILY SSF53254 90 251 2.17E-42 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 SUPERFAMILY SSF53254 5 52 2.17E-42 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 PANTHER PTHR23029 8 55 9.4E-29 T 22-04-2016 HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 PANTHER PTHR23029 86 232 9.4E-29 T 22-04-2016 HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 46 9.8E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 86 232 3.6E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 SMART SM00855 4 202 1.4E-16 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 Gene3D G3DSA:3.40.50.1240 81 264 5.2E-54 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS03570 1f381e6f3342312c12debf621f4cb3c2 281 Gene3D G3DSA:3.40.50.1240 4 48 5.2E-54 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 SUPERFAMILY SSF140990 472 665 1.57E-66 T 22-04-2016 HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 ProSitePatterns PS00674 AAA-protein family signature. 357 375 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 SUPERFAMILY SSF52540 212 458 5.78E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 Gene3D G3DSA:3.40.50.300 213 395 2.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 Gene3D G3DSA:1.10.8.60 396 461 7.5E-23 T 22-04-2016 HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 254 385 3.4E-45 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 PANTHER PTHR23076 13 658 5.9E-276 T 22-04-2016 HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 29 673 35.683 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 168 656 4.8E-215 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 SMART SM00382 250 389 1.4E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 PANTHER PTHR23076:SF10 13 658 5.9E-276 T 22-04-2016 HMPREF9228_RS07485 dc81a7142df0740db53de317ea4e72fb 698 Pfam PF01434 Peptidase family M41 449 655 1.3E-73 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 HMPREF9228_RS02125 74a38284a69399a343ced50bdbd0b575 252 PANTHER PTHR24094:SF10 76 249 1.1E-47 T 22-04-2016 HMPREF9228_RS02125 74a38284a69399a343ced50bdbd0b575 252 PANTHER PTHR24094 76 249 1.1E-47 T 22-04-2016 HMPREF9228_RS02125 74a38284a69399a343ced50bdbd0b575 252 Pfam PF07510 Protein of unknown function (DUF1524) 102 239 7.3E-19 T 22-04-2016 IPR011089 Domain of unknown function DUF1524 HMPREF9228_RS01095 b27427f96c38d665517dfcc9a6407c67 723 Gene3D G3DSA:3.40.50.300 414 652 9.8E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01095 b27427f96c38d665517dfcc9a6407c67 723 Pfam PF13481 AAA domain 414 592 3.7E-35 T 22-04-2016 HMPREF9228_RS01095 b27427f96c38d665517dfcc9a6407c67 723 PRINTS PR01874 DNA repair protein radA signature 624 650 4.3E-5 T 22-04-2016 HMPREF9228_RS01095 b27427f96c38d665517dfcc9a6407c67 723 PRINTS PR01874 DNA repair protein radA signature 428 456 4.3E-5 T 22-04-2016 HMPREF9228_RS01095 b27427f96c38d665517dfcc9a6407c67 723 Gene3D G3DSA:3.40.1360.10 289 387 2.0E-5 T 22-04-2016 HMPREF9228_RS01095 b27427f96c38d665517dfcc9a6407c67 723 SUPERFAMILY SSF52540 429 638 3.58E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06950 df87758f903cfdd938a26e54afa3044d 351 Gene3D G3DSA:1.10.443.10 136 324 5.5E-37 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS06950 df87758f903cfdd938a26e54afa3044d 351 SUPERFAMILY SSF56349 130 328 9.12E-41 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS06950 df87758f903cfdd938a26e54afa3044d 351 PANTHER PTHR30349:SF5 32 345 9.5E-39 T 22-04-2016 HMPREF9228_RS06950 df87758f903cfdd938a26e54afa3044d 351 Pfam PF00589 Phage integrase family 138 312 3.1E-25 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS06950 df87758f903cfdd938a26e54afa3044d 351 Gene3D G3DSA:1.10.150.130 26 106 2.5E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal HMPREF9228_RS06950 df87758f903cfdd938a26e54afa3044d 351 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 28 106 5.4E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 HMPREF9228_RS06950 df87758f903cfdd938a26e54afa3044d 351 PANTHER PTHR30349 32 345 9.5E-39 T 22-04-2016 HMPREF9228_RS04755 05474ae609412ae378f4262b8b8391d6 204 Gene3D G3DSA:3.40.50.850 1 203 4.5E-49 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 HMPREF9228_RS04755 05474ae609412ae378f4262b8b8391d6 204 Pfam PF00857 Isochorismatase family 4 201 6.6E-24 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 HMPREF9228_RS04755 05474ae609412ae378f4262b8b8391d6 204 PANTHER PTHR11080:SF2 132 204 6.2E-34 T 22-04-2016 HMPREF9228_RS04755 05474ae609412ae378f4262b8b8391d6 204 PANTHER PTHR11080:SF2 1 110 6.2E-34 T 22-04-2016 HMPREF9228_RS04755 05474ae609412ae378f4262b8b8391d6 204 SUPERFAMILY SSF52499 2 201 1.1E-38 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 HMPREF9228_RS04755 05474ae609412ae378f4262b8b8391d6 204 PANTHER PTHR11080 132 204 6.2E-34 T 22-04-2016 HMPREF9228_RS04755 05474ae609412ae378f4262b8b8391d6 204 PANTHER PTHR11080 1 110 6.2E-34 T 22-04-2016 HMPREF9228_RS02375 956a8af2f0f2121dcea16ed80e482540 93 Gene3D G3DSA:4.10.520.10 4 92 7.2E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 HMPREF9228_RS02375 956a8af2f0f2121dcea16ed80e482540 93 PANTHER PTHR33175 2 91 1.1E-27 T 22-04-2016 HMPREF9228_RS02375 956a8af2f0f2121dcea16ed80e482540 93 SUPERFAMILY SSF47729 4 92 2.65E-25 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 HMPREF9228_RS02375 956a8af2f0f2121dcea16ed80e482540 93 SMART SM00411 3 92 3.9E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 HMPREF9228_RS02375 956a8af2f0f2121dcea16ed80e482540 93 Pfam PF00216 Bacterial DNA-binding protein 4 91 1.3E-27 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 HMPREF9228_RS07635 ccb1c2b0cd4c0ee465cd3c7e9bbd7744 369 Gene3D G3DSA:1.10.530.10 56 213 4.2E-23 T 22-04-2016 HMPREF9228_RS07635 ccb1c2b0cd4c0ee465cd3c7e9bbd7744 369 Pfam PF01464 Transglycosylase SLT domain 79 200 8.2E-11 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 HMPREF9228_RS07635 ccb1c2b0cd4c0ee465cd3c7e9bbd7744 369 Pfam PF05257 CHAP domain 257 343 4.4E-14 T 22-04-2016 IPR007921 CHAP domain HMPREF9228_RS07635 ccb1c2b0cd4c0ee465cd3c7e9bbd7744 369 SUPERFAMILY SSF53955 38 211 9.73E-19 T 22-04-2016 IPR023346 Lysozyme-like domain HMPREF9228_RS07635 ccb1c2b0cd4c0ee465cd3c7e9bbd7744 369 SUPERFAMILY SSF54001 253 354 1.57E-18 T 22-04-2016 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 SUPERFAMILY SSF49785 10 201 4.82E-42 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 Gene3D G3DSA:3.20.20.80 320 569 3.0E-51 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 Gene3D G3DSA:3.20.20.80 629 696 3.0E-51 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 PANTHER PTHR10066 628 765 1.3E-170 T 22-04-2016 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 PANTHER PTHR10066 167 608 1.3E-170 T 22-04-2016 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 PANTHER PTHR10066 11 149 1.3E-170 T 22-04-2016 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 Gene3D G3DSA:2.60.40.320 204 319 1.8E-12 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 SUPERFAMILY SSF51445 317 696 8.33E-82 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 SUPERFAMILY SSF49303 204 320 3.17E-13 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 PANTHER PTHR10066:SF12 628 765 1.3E-170 T 22-04-2016 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 PANTHER PTHR10066:SF12 167 608 1.3E-170 T 22-04-2016 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 PANTHER PTHR10066:SF12 11 149 1.3E-170 T 22-04-2016 HMPREF9228_RS06085 aa2e920400840b5908726c06120aaad7 895 Gene3D G3DSA:2.60.120.260 11 199 1.1E-18 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Gene3D G3DSA:3.30.300.20 629 700 2.1E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Hamap MF_00195 GTPase Der [der]. 272 704 34.229 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 PANTHER PTHR11649 232 708 1.9E-124 T 22-04-2016 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Gene3D G3DSA:3.40.50.300 270 429 3.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Gene3D G3DSA:3.40.50.300 2 227 7.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 SUPERFAMILY SSF52540 407 700 1.37E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 275 424 7.6E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 448 586 2.3E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 SMART SM00382 446 691 1.3 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 SMART SM00382 271 407 1.2 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 224 3.5E-41 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 SUPERFAMILY SSF52540 3 229 1.08E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Pfam PF01926 50S ribosome-binding GTPase 449 567 5.4E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Pfam PF01926 50S ribosome-binding GTPase 275 389 3.4E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 623 699 7.5E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 PANTHER PTHR11649:SF5 232 708 1.9E-124 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Gene3D G3DSA:3.40.50.300 447 628 1.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 450 470 1.7E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 499 514 1.7E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Hamap MF_00238 Cytidylate kinase [cmk]. 2 230 25.301 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 274 700 3.8E-155 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 Pfam PF02224 Cytidylate kinase 4 227 4.4E-43 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 HMPREF9228_RS04010 75f6d4f3e232144bd138e8caa9a71f4e 708 SUPERFAMILY SSF52540 275 437 4.88E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06605 84f71a4b3281a0abb2a6ffad79c9e067 256 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 250 2.5E-63 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 HMPREF9228_RS06605 84f71a4b3281a0abb2a6ffad79c9e067 256 SUPERFAMILY SSF53067 123 253 5.04E-30 T 22-04-2016 HMPREF9228_RS06605 84f71a4b3281a0abb2a6ffad79c9e067 256 Gene3D G3DSA:3.30.420.40 94 255 1.1E-39 T 22-04-2016 HMPREF9228_RS06605 84f71a4b3281a0abb2a6ffad79c9e067 256 SUPERFAMILY SSF53067 1 122 3.37E-32 T 22-04-2016 HMPREF9228_RS06605 84f71a4b3281a0abb2a6ffad79c9e067 256 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 31.029 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 HMPREF9228_RS06605 84f71a4b3281a0abb2a6ffad79c9e067 256 Pfam PF03309 Type III pantothenate kinase 3 205 2.3E-58 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 HMPREF9228_RS06605 84f71a4b3281a0abb2a6ffad79c9e067 256 PANTHER PTHR34265 1 255 4.8E-56 T 22-04-2016 HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 PANTHER PTHR24220 9 401 3.2E-84 T 22-04-2016 HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 Pfam PF00005 ABC transporter 289 440 2.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 Pfam PF00005 ABC transporter 25 172 1.5E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 Gene3D G3DSA:3.40.50.300 271 485 1.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 PANTHER PTHR24220:SF66 9 401 3.2E-84 T 22-04-2016 HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 SUPERFAMILY SSF52540 14 241 3.43E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 SUPERFAMILY SSF52540 274 485 1.86E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 Gene3D G3DSA:3.40.50.300 20 244 4.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 SMART SM00382 34 221 7.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05750 d43db43aa9104048b268b4ae622d92de 490 SMART SM00382 296 489 2.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 SMART SM00354 3 73 1.1E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 Gene3D G3DSA:3.40.50.2300 53 175 4.1E-27 T 22-04-2016 HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 49 8.7E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 Pfam PF13377 Periplasmic binding protein-like domain 171 332 3.9E-28 T 22-04-2016 HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 SUPERFAMILY SSF53822 61 318 1.78E-48 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 Gene3D G3DSA:3.40.50.2300 176 312 3.7E-34 T 22-04-2016 HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 PANTHER PTHR30146 3 341 3.7E-74 T 22-04-2016 HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 SUPERFAMILY SSF47413 3 61 1.97E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00535 9f4dd1ad0e0b75f4e207614e84075872 343 Gene3D G3DSA:1.10.260.40 3 52 2.1E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS06340 e6fd7c9a67357aa9dc07ec2911d56bd8 78 Gene3D G3DSA:2.30.170.40 2 75 7.8E-31 T 22-04-2016 HMPREF9228_RS06340 e6fd7c9a67357aa9dc07ec2911d56bd8 78 PANTHER PTHR13528 1 72 9.4E-30 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 HMPREF9228_RS06340 e6fd7c9a67357aa9dc07ec2911d56bd8 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.8E-24 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06340 e6fd7c9a67357aa9dc07ec2911d56bd8 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 19.179 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06340 e6fd7c9a67357aa9dc07ec2911d56bd8 78 Pfam PF00830 Ribosomal L28 family 3 61 1.1E-23 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 HMPREF9228_RS06340 e6fd7c9a67357aa9dc07ec2911d56bd8 78 SUPERFAMILY SSF143800 2 74 1.18E-26 T 22-04-2016 HMPREF9228_RS03600 3d7c8f4ad4536dad51f8f96f01c6d693 323 Gene3D G3DSA:1.10.8.60 141 221 4.7E-6 T 22-04-2016 HMPREF9228_RS03600 3d7c8f4ad4536dad51f8f96f01c6d693 323 SUPERFAMILY SSF48019 204 321 5.1E-20 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 HMPREF9228_RS03600 3d7c8f4ad4536dad51f8f96f01c6d693 323 PANTHER PTHR34388 8 323 1.6E-37 T 22-04-2016 HMPREF9228_RS03600 3d7c8f4ad4536dad51f8f96f01c6d693 323 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 8 316 5.9E-29 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 HMPREF9228_RS07525 54625f432d40713d4b8c8aa1e1d8e908 308 PANTHER PTHR22916 1 286 1.3E-31 T 22-04-2016 HMPREF9228_RS07525 54625f432d40713d4b8c8aa1e1d8e908 308 SUPERFAMILY SSF53448 3 261 9.64E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS07525 54625f432d40713d4b8c8aa1e1d8e908 308 Gene3D G3DSA:3.90.550.10 4 242 2.7E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS07525 54625f432d40713d4b8c8aa1e1d8e908 308 Pfam PF00535 Glycosyl transferase family 2 5 161 4.3E-25 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS02090 21ed7a43d2a46d13832e73d0384bc808 449 PANTHER PTHR30061 1 446 5.1E-69 T 22-04-2016 HMPREF9228_RS02090 21ed7a43d2a46d13832e73d0384bc808 449 SUPERFAMILY SSF53850 21 444 4.44E-72 T 22-04-2016 HMPREF9228_RS02090 21ed7a43d2a46d13832e73d0384bc808 449 Pfam PF01547 Bacterial extracellular solute-binding protein 48 336 6.2E-32 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 HMPREF9228_RS02090 21ed7a43d2a46d13832e73d0384bc808 449 PANTHER PTHR30061:SF25 1 446 5.1E-69 T 22-04-2016 HMPREF9228_RS02090 21ed7a43d2a46d13832e73d0384bc808 449 Gene3D G3DSA:3.40.190.10 168 360 1.6E-36 T 22-04-2016 HMPREF9228_RS02090 21ed7a43d2a46d13832e73d0384bc808 449 Gene3D G3DSA:3.40.190.10 38 167 3.5E-9 T 22-04-2016 HMPREF9228_RS07185 ee867708fc5db077c6a48a296a10134a 95 Pfam PF01909 Nucleotidyltransferase domain 20 70 1.1E-8 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 HMPREF9228_RS07185 ee867708fc5db077c6a48a296a10134a 95 Gene3D G3DSA:3.30.460.10 5 94 7.6E-18 T 22-04-2016 HMPREF9228_RS07185 ee867708fc5db077c6a48a296a10134a 95 SUPERFAMILY SSF81301 4 91 2.08E-12 T 22-04-2016 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 1 283 33.592 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 SUPERFAMILY SSF53850 1 208 2.34E-61 T 22-04-2016 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 Gene3D G3DSA:3.30.70.120 211 276 7.8E-27 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 PANTHER PTHR21403:SF0 1 283 7.8E-107 T 22-04-2016 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 Gene3D G3DSA:3.40.190.10 1 141 5.8E-40 T 22-04-2016 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 Pfam PF08029 HisG, C-terminal domain 208 279 1.3E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 Pfam PF01634 ATP phosphoribosyltransferase 49 204 6.8E-43 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 189 280 2.7E-30 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 PANTHER PTHR21403 1 283 7.8E-107 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 142 163 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 SUPERFAMILY SSF54913 210 280 7.45E-20 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta HMPREF9228_RS03925 df78d6bf1c25ab845f030d066e2fb277 283 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 183 1.1E-59 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 HMPREF9228_RS00635 ccdfdb8893405167635ef5137274a7dd 241 PANTHER PTHR30353 1 215 1.8E-62 T 22-04-2016 IPR032818 DedA family HMPREF9228_RS00635 ccdfdb8893405167635ef5137274a7dd 241 PANTHER PTHR30353:SF0 1 215 1.8E-62 T 22-04-2016 HMPREF9228_RS00635 ccdfdb8893405167635ef5137274a7dd 241 Pfam PF09335 SNARE associated Golgi protein 49 180 5.0E-21 T 22-04-2016 IPR032816 SNARE associated Golgi protein HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 49 2.2E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 Gene3D G3DSA:3.40.50.2300 54 172 2.4E-24 T 22-04-2016 HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 SUPERFAMILY SSF53822 61 328 1.73E-46 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 SUPERFAMILY SSF47413 3 61 1.05E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 Gene3D G3DSA:3.40.50.2300 173 333 1.6E-34 T 22-04-2016 HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 Pfam PF13377 Periplasmic binding protein-like domain 172 333 8.9E-25 T 22-04-2016 HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 Gene3D G3DSA:1.10.260.40 3 53 4.4E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 PANTHER PTHR30146 3 333 4.7E-71 T 22-04-2016 HMPREF9228_RS00585 c9379e25aaa7c13e7b55e510ede8eceb 341 SMART SM00354 3 73 1.5E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS09450 7960475119ab1b63919d1c03b317461e 402 SUPERFAMILY SSF53067 101 380 9.18E-30 T 22-04-2016 HMPREF9228_RS09450 7960475119ab1b63919d1c03b317461e 402 PANTHER PTHR18964:SF109 77 366 5.6E-23 T 22-04-2016 HMPREF9228_RS09450 7960475119ab1b63919d1c03b317461e 402 SUPERFAMILY SSF46785 18 74 5.46E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09450 7960475119ab1b63919d1c03b317461e 402 Gene3D G3DSA:3.30.420.40 240 369 3.8E-23 T 22-04-2016 HMPREF9228_RS09450 7960475119ab1b63919d1c03b317461e 402 Pfam PF00480 ROK family 102 351 5.5E-25 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS09450 7960475119ab1b63919d1c03b317461e 402 Gene3D G3DSA:3.30.420.40 97 239 9.6E-23 T 22-04-2016 HMPREF9228_RS09450 7960475119ab1b63919d1c03b317461e 402 Gene3D G3DSA:1.10.10.10 15 94 8.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09450 7960475119ab1b63919d1c03b317461e 402 PANTHER PTHR18964 77 366 5.6E-23 T 22-04-2016 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 Pfam PF01678 Diaminopimelate epimerase 169 290 2.9E-12 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 Pfam PF01678 Diaminopimelate epimerase 8 145 1.1E-20 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 5 298 24.74 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 Gene3D G3DSA:3.10.310.10 7 144 3.1E-34 T 22-04-2016 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 SUPERFAMILY SSF54506 160 294 2.69E-21 T 22-04-2016 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 82 96 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 PANTHER PTHR31689 8 299 2.0E-52 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 Gene3D G3DSA:3.10.310.10 145 285 4.0E-27 T 22-04-2016 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 SUPERFAMILY SSF54506 8 150 8.72E-30 T 22-04-2016 HMPREF9228_RS05900 ace0494e1a7434fe530901405ec1c971 299 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 8 295 6.6E-47 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS08040 04c96fe954e695addb26343969200323 266 Gene3D G3DSA:3.40.50.2300 7 95 3.7E-8 T 22-04-2016 HMPREF9228_RS08040 04c96fe954e695addb26343969200323 266 Pfam PF13377 Periplasmic binding protein-like domain 90 262 1.1E-32 T 22-04-2016 HMPREF9228_RS08040 04c96fe954e695addb26343969200323 266 SUPERFAMILY SSF53822 4 263 6.48E-46 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS08040 04c96fe954e695addb26343969200323 266 Gene3D G3DSA:3.40.50.2300 96 242 3.8E-42 T 22-04-2016 HMPREF9228_RS08040 04c96fe954e695addb26343969200323 266 PANTHER PTHR30146 3 263 4.4E-47 T 22-04-2016 HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 328 43.268 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 Gene3D G3DSA:1.10.1040.10 39 324 1.4E-100 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 SUPERFAMILY SSF51735 4 184 9.05E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 Gene3D G3DSA:3.50.50.60 9 38 1.6E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 PANTHER PTHR21371 5 337 8.7E-154 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 SUPERFAMILY SSF48179 185 333 1.48E-61 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 179 1.2E-73 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 1.6E-124 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00515 d9840f2fee5bd469ea7fcdb15a7d02d3 350 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 326 6.9E-56 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00150 696b8eb0c9e1faad3f8d6baf41a881cf 604 Pfam PF08757 CotH protein 154 480 2.0E-77 T 22-04-2016 IPR014867 Spore coat protein CotH HMPREF9228_RS02435 d6c8fb30c23cc8147b96a3f98f2bfceb 218 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 135 216 1.9E-14 T 22-04-2016 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 Gene3D G3DSA:3.30.390.30 385 501 1.8E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 Gene3D G3DSA:3.50.50.60 153 250 7.3E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 Gene3D G3DSA:3.50.50.60 296 379 7.3E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PANTHER PTHR22912 289 501 6.7E-181 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PANTHER PTHR22912 1 252 6.7E-181 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 49 59 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 363 6.8E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 Gene3D G3DSA:3.50.50.60 12 152 1.2E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 SUPERFAMILY SSF51905 298 416 1.3E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 SUPERFAMILY SSF51905 10 260 1.3E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PANTHER PTHR22912:SF145 289 501 6.7E-181 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PANTHER PTHR22912:SF145 1 252 6.7E-181 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 SUPERFAMILY SSF55424 388 501 2.92E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 2.0E-27 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 335 357 2.0E-27 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 2.0E-27 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 2.0E-27 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 306 322 2.0E-27 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 392 498 4.7E-26 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 475 495 1.1E-41 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 1.1E-41 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 1.1E-41 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 48 63 1.1E-41 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 1.1E-41 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 453 468 1.1E-41 T 22-04-2016 HMPREF9228_RS07985 1b162ff7acccff41a42cf54733fb41fb 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 388 409 1.1E-41 T 22-04-2016 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 PANTHER PTHR20836 1 251 4.3E-60 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 131 148 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 115 240 7.1E-27 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 250 26.868 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 42 238 3.8E-47 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 SUPERFAMILY SSF51735 1 136 2.69E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 PIRSF PIRSF000161 1 251 2.6E-55 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 Gene3D G3DSA:3.30.360.10 127 216 1.5E-28 T 22-04-2016 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 109 1.2E-23 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 SUPERFAMILY SSF55347 110 219 5.01E-39 T 22-04-2016 HMPREF9228_RS06725 30ff616100cec8e7de6e08310436af99 251 Gene3D G3DSA:3.40.50.720 1 126 1.5E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 392 406 6.7E-18 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 454 467 6.7E-18 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 377 391 6.7E-18 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 320 342 6.7E-18 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 131 150 6.7E-18 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 Gene3D G3DSA:3.40.710.10 107 166 6.2E-5 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PANTHER PTHR30023 201 482 2.3E-32 T 22-04-2016 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PANTHER PTHR30023 52 185 2.3E-32 T 22-04-2016 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PANTHER PTHR30023:SF0 201 482 2.3E-32 T 22-04-2016 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 PANTHER PTHR30023:SF0 52 185 2.3E-32 T 22-04-2016 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 Gene3D G3DSA:3.40.710.10 285 497 3.7E-45 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 SUPERFAMILY SSF56601 111 496 4.23E-44 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 97 268 1.3E-16 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 HMPREF9228_RS07500 9e2cbed12e6b383269d1cc0009d7e4aa 498 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 283 491 1.2E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 SUPERFAMILY SSF54211 9 211 5.31E-50 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 ProSitePatterns PS00106 Galactokinase signature. 39 50 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PANTHER PTHR10457 18 398 1.6E-91 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PIRSF PIRSF000530 3 416 4.9E-125 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 Pfam PF10509 Galactokinase galactose-binding signature 22 70 2.1E-19 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PRINTS PR00473 Galactokinase signature 124 142 1.6E-19 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PRINTS PR00473 Galactokinase signature 103 114 1.6E-19 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PRINTS PR00473 Galactokinase signature 298 312 1.6E-19 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PRINTS PR00473 Galactokinase signature 39 57 1.6E-19 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 Gene3D G3DSA:3.30.70.890 234 411 7.7E-56 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 Gene3D G3DSA:3.30.230.10 17 233 1.4E-63 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PRINTS PR00959 Mevalonate kinase family signature 361 378 5.2E-34 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PRINTS PR00959 Mevalonate kinase family signature 131 153 5.2E-34 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PRINTS PR00959 Mevalonate kinase family signature 37 61 5.2E-34 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 PRINTS PR00959 Mevalonate kinase family signature 179 198 5.2E-34 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 Pfam PF08544 GHMP kinases C terminal 315 394 2.9E-16 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 TIGRFAM TIGR00131 gal_kin: galactokinase 18 396 1.8E-84 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 133 144 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 SUPERFAMILY SSF55060 229 405 3.2E-47 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS06805 6147fefc7d2464db31b064cc555eb46a 416 Pfam PF00288 GHMP kinases N terminal domain 130 196 1.5E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 SUPERFAMILY SSF50104 2 91 2.14E-28 T 22-04-2016 IPR008991 Translation protein SH3-like domain HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 PANTHER PTHR12903 4 107 2.5E-33 T 22-04-2016 HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 Pfam PF00467 KOW motif 8 37 1.9E-6 T 22-04-2016 IPR005824 KOW HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 109 3.4E-31 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 109 5.3E-25 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 Gene3D G3DSA:2.30.30.30 3 91 9.9E-24 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 104 20.25 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 SMART SM00739 4 31 8.9E-6 T 22-04-2016 IPR005824 KOW HMPREF9228_RS08140 22b834b8eee668d4b0879d69702a93c5 111 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 SMART SM00967 70 146 2.5E-15 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 SUPERFAMILY SSF75217 173 325 4.25E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 Pfam PF00588 SpoU rRNA Methylase family 177 318 5.1E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 Gene3D G3DSA:3.40.1280.10 175 325 1.6E-48 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 PANTHER PTHR12029 64 332 6.3E-67 T 22-04-2016 HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 68 323 2.6E-63 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 PANTHER PTHR12029:SF58 64 332 6.3E-67 T 22-04-2016 HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 Gene3D G3DSA:3.30.1330.30 65 142 1.4E-18 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 70 145 6.7E-17 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 HMPREF9228_RS09520 0716d10bfbce54b5e90fa114655c4df7 332 SUPERFAMILY SSF55315 65 143 6.12E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 SUPERFAMILY SSF52518 407 609 2.24E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 SUPERFAMILY SSF52518 18 380 7.58E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 ProSitePatterns PS60003 Phosphoketolase signature 2. 166 184 - T 22-04-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 Gene3D G3DSA:3.40.50.970 61 340 1.0E-10 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 ProSitePatterns PS60002 Phosphoketolase signature 1. 153 159 - T 22-04-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 414 594 3.5E-74 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 Gene3D G3DSA:3.40.50.920 636 766 1.9E-5 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 Pfam PF09363 XFP C-terminal domain 605 803 1.5E-66 T 22-04-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 PIRSF PIRSF017245 1 805 0.0 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 Pfam PF09364 XFP N-terminal domain 17 397 5.2E-191 T 22-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 PANTHER PTHR31273 16 807 0.0 T 22-04-2016 HMPREF9228_RS05205 ea74aa366ad75e1dd57c6b71b49bac84 825 PANTHER PTHR31273:SF0 16 807 0.0 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031:SF122 553 600 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031:SF122 451 531 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031:SF122 214 261 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031:SF122 1659 1668 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031:SF122 370 404 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031:SF122 17 189 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 Pfam PF00271 Helicase conserved C-terminal domain 449 515 2.2E-12 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 SMART SM00487 19 261 1.3E-38 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 SMART SM00490 435 520 1.7E-13 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 Pfam PF08494 DEAD/H associated 809 997 2.1E-69 T 22-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 Gene3D G3DSA:3.40.50.300 10 227 3.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 Pfam PF00270 DEAD/DEAH box helicase 24 229 3.4E-29 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031 553 600 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031 451 531 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031 214 261 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031 1659 1668 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031 370 404 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 PANTHER PTHR24031 17 189 6.5E-63 T 22-04-2016 HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 Gene3D G3DSA:3.40.50.300 371 400 6.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 Gene3D G3DSA:3.40.50.300 447 529 6.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 SUPERFAMILY SSF52540 357 400 1.18E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 SUPERFAMILY SSF52540 447 524 1.18E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 SUPERFAMILY SSF52540 31 189 1.18E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03420 6d5c81e07703d7af7200baab0a09b8c0 1683 SUPERFAMILY SSF52540 217 231 1.18E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 42 343 2.9E-129 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 270 344 4.7E-31 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 Gene3D G3DSA:1.10.8.60 200 272 1.4E-26 T 22-04-2016 HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 21 251 1.6E-103 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 PANTHER PTHR13779 11 348 6.4E-150 T 22-04-2016 HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 Gene3D G3DSA:3.40.50.300 36 190 8.2E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 SUPERFAMILY SSF52540 35 268 1.36E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 354 146.941 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 Gene3D G3DSA:1.10.10.10 274 344 3.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 SUPERFAMILY SSF46785 274 345 1.63E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 PANTHER PTHR13779:SF25 11 348 6.4E-150 T 22-04-2016 HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 267 350 2.0E-43 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 HMPREF9228_RS04055 2f22a5ac58fda2f8bf75f23a4e3c846a 354 SMART SM00382 68 201 6.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09445 70744bad90010ab510362d31823a8587 429 Gene3D G3DSA:3.40.190.10 178 357 4.6E-27 T 22-04-2016 HMPREF9228_RS09445 70744bad90010ab510362d31823a8587 429 Gene3D G3DSA:3.40.190.10 45 177 1.1E-16 T 22-04-2016 HMPREF9228_RS09445 70744bad90010ab510362d31823a8587 429 SUPERFAMILY SSF53850 33 423 1.4E-56 T 22-04-2016 HMPREF9228_RS09445 70744bad90010ab510362d31823a8587 429 PANTHER PTHR30061:SF1 4 364 6.3E-47 T 22-04-2016 HMPREF9228_RS09445 70744bad90010ab510362d31823a8587 429 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 154 171 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 HMPREF9228_RS09445 70744bad90010ab510362d31823a8587 429 Pfam PF01547 Bacterial extracellular solute-binding protein 55 345 4.1E-29 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 HMPREF9228_RS09445 70744bad90010ab510362d31823a8587 429 PANTHER PTHR30061 4 364 6.3E-47 T 22-04-2016 HMPREF9228_RS01230 b97b8a4faf315802fb5b0aef9f02568f 608 Gene3D G3DSA:1.10.3210.10 443 557 5.1E-9 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS01230 b97b8a4faf315802fb5b0aef9f02568f 608 SUPERFAMILY SSF109604 421 555 3.51E-10 T 22-04-2016 HMPREF9228_RS01230 b97b8a4faf315802fb5b0aef9f02568f 608 PANTHER PTHR13734:SF45 393 608 5.1E-22 T 22-04-2016 HMPREF9228_RS01230 b97b8a4faf315802fb5b0aef9f02568f 608 Pfam PF01909 Nucleotidyltransferase domain 61 107 1.8E-5 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 HMPREF9228_RS01230 b97b8a4faf315802fb5b0aef9f02568f 608 SUPERFAMILY SSF81301 33 160 1.61E-15 T 22-04-2016 HMPREF9228_RS01230 b97b8a4faf315802fb5b0aef9f02568f 608 PANTHER PTHR13734 393 608 5.1E-22 T 22-04-2016 HMPREF9228_RS01230 b97b8a4faf315802fb5b0aef9f02568f 608 Gene3D G3DSA:3.30.460.10 61 151 3.0E-7 T 22-04-2016 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.4E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 PANTHER PTHR12220 1 135 1.7E-66 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.061 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.8E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.8E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.8E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.8E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 SUPERFAMILY SSF54686 1 136 2.09E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 Gene3D G3DSA:3.90.1170.10 23 136 1.2E-50 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08160 7587e6c32a8ed2a07890af5e90f4fb34 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 4.8E-54 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 HMPREF9228_RS06550 51f772103958beafb01ddb30a08ab3d9 180 Gene3D G3DSA:3.40.630.30 11 177 1.5E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS06550 51f772103958beafb01ddb30a08ab3d9 180 SUPERFAMILY SSF55729 15 166 8.19E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS04195 fc58c714c606c4c8f26bb7c7e086cfe6 321 PANTHER PTHR30448:SF0 24 319 1.4E-130 T 22-04-2016 HMPREF9228_RS04195 fc58c714c606c4c8f26bb7c7e086cfe6 321 PIRSF PIRSF005052 33 320 1.1E-114 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 HMPREF9228_RS04195 fc58c714c606c4c8f26bb7c7e086cfe6 321 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 33 317 38.903 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 HMPREF9228_RS04195 fc58c714c606c4c8f26bb7c7e086cfe6 321 SUPERFAMILY SSF52540 35 186 2.66E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04195 fc58c714c606c4c8f26bb7c7e086cfe6 321 Gene3D G3DSA:3.40.50.300 15 188 3.2E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04195 fc58c714c606c4c8f26bb7c7e086cfe6 321 PANTHER PTHR30448 24 319 1.4E-130 T 22-04-2016 HMPREF9228_RS04195 fc58c714c606c4c8f26bb7c7e086cfe6 321 Pfam PF03668 P-loop ATPase protein family 34 313 1.4E-99 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 3.6E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 PANTHER PTHR30146:SF30 10 351 2.2E-70 T 22-04-2016 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 Gene3D G3DSA:1.10.260.40 11 62 2.6E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 Pfam PF13377 Periplasmic binding protein-like domain 178 350 5.7E-25 T 22-04-2016 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 Gene3D G3DSA:3.40.50.2300 183 328 2.1E-35 T 22-04-2016 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 PANTHER PTHR30146 10 351 2.2E-70 T 22-04-2016 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 SMART SM00354 10 80 4.9E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 Gene3D G3DSA:3.40.50.2300 63 182 1.1E-21 T 22-04-2016 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 SUPERFAMILY SSF53822 71 350 1.01E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS02110 b3c0e18a31bb74ebe7b88487cf41402b 351 SUPERFAMILY SSF47413 9 68 3.49E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS05920 8365c45a848274a0d11f5351a599452d 303 PANTHER PTHR10264:SF84 9 303 2.9E-88 T 22-04-2016 HMPREF9228_RS05920 8365c45a848274a0d11f5351a599452d 303 SUPERFAMILY SSF117892 56 191 1.7E-25 T 22-04-2016 IPR001107 Band 7 domain HMPREF9228_RS05920 8365c45a848274a0d11f5351a599452d 303 SMART SM00244 25 184 2.5E-30 T 22-04-2016 IPR001107 Band 7 domain HMPREF9228_RS05920 8365c45a848274a0d11f5351a599452d 303 Pfam PF01145 SPFH domain / Band 7 family 29 200 9.4E-31 T 22-04-2016 IPR001107 Band 7 domain HMPREF9228_RS05920 8365c45a848274a0d11f5351a599452d 303 PANTHER PTHR10264 9 303 2.9E-88 T 22-04-2016 IPR001972 Stomatin family GO:0016020 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 Pfam PF03461 TRCF domain 1035 1116 2.9E-24 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SUPERFAMILY SSF52540 556 813 1.17E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SMART SM00490 856 940 3.5E-16 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 Gene3D G3DSA:3.30.2060.10 167 240 1.3E-13 T 22-04-2016 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SMART SM00982 1034 1129 1.6E-34 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SMART SM00487 630 820 4.0E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 PANTHER PTHR14025:SF21 424 1134 0.0 T 22-04-2016 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 PANTHER PTHR14025 424 1134 0.0 T 22-04-2016 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 182 1107 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SUPERFAMILY SSF52540 35 375 8.32E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 Pfam PF00271 Helicase conserved C-terminal domain 840 939 2.2E-15 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 Pfam PF02559 CarD-like/TRCF domain 502 605 3.2E-33 T 22-04-2016 IPR003711 CarD-like/TRCF domain HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 Pfam PF00270 DEAD/DEAH box helicase 655 797 1.1E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SMART SM01058 501 606 8.4E-48 T 22-04-2016 IPR003711 CarD-like/TRCF domain HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 Gene3D G3DSA:3.40.50.300 618 816 2.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SUPERFAMILY SSF143517 1024 1177 4.32E-32 T 22-04-2016 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 Gene3D G3DSA:3.40.50.300 823 993 9.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SUPERFAMILY SSF141259 494 578 9.15E-17 T 22-04-2016 IPR003711 CarD-like/TRCF domain HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 54 1128 28.744 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 HMPREF9228_RS05500 3a4d222b47dd880058bcfff9a18b6a1c 1182 SUPERFAMILY SSF52540 812 1020 2.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 Gene3D G3DSA:3.40.50.300 302 515 3.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 Pfam PF13361 UvrD-like helicase C-terminal domain 298 400 1.8E-10 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 Pfam PF13361 UvrD-like helicase C-terminal domain 417 499 1.2E-21 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 PANTHER PTHR11070:SF21 2 515 5.5E-122 T 22-04-2016 HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 PANTHER PTHR11070 2 515 5.5E-122 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 291 1.0E-39 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 Gene3D G3DSA:3.40.50.300 184 292 8.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 Gene3D G3DSA:3.40.50.300 10 151 8.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05875 cf31f4d843cb9f5a9e86b44f779b803d 515 SUPERFAMILY SSF52540 5 514 8.86E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 210 4.1E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 Gene3D G3DSA:3.40.50.2300 1 155 6.1E-29 T 22-04-2016 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 Pfam PF00072 Response regulator receiver domain 3 107 4.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 PANTHER PTHR26402 1 211 4.1E-51 T 22-04-2016 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 SUPERFAMILY SSF52172 1 122 2.85E-26 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 SMART SM00448 1 120 3.0E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 Gene3D G3DSA:1.10.10.10 156 214 8.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 SMART SM00421 155 212 1.3E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 2.4E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 2.4E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 2.4E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 SUPERFAMILY SSF46894 153 214 5.44E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS04820 511b0f1867fb619e0d3e4afe2b31ebc0 217 PANTHER PTHR26402:SF151 1 211 4.1E-51 T 22-04-2016 HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 PANTHER PTHR22777 1 433 1.4E-116 T 22-04-2016 HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 SMART SM00116 221 270 0.16 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 SMART SM00116 282 330 12.0 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 SUPERFAMILY SSF54631 209 340 4.8E-28 T 22-04-2016 HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 Gene3D G3DSA:3.30.465.10 350 433 3.7E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 Pfam PF03471 Transporter associated domain 356 428 8.2E-16 T 22-04-2016 IPR005170 Transporter-associated domain HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 SUPERFAMILY SSF56176 355 434 3.27E-15 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 Pfam PF00571 CBS domain 295 330 0.0013 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 Pfam PF00571 CBS domain 212 268 3.0E-7 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 SMART SM01091 351 430 2.1E-17 T 22-04-2016 IPR005170 Transporter-associated domain HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 Pfam PF01595 Domain of unknown function DUF21 9 191 3.8E-36 T 22-04-2016 IPR002550 Domain of unknown function DUF21 HMPREF9228_RS00100 38a2b273ca421e31c5d60d87f3d9658a 447 Gene3D G3DSA:3.10.580.10 198 337 1.2E-16 T 22-04-2016 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SUPERFAMILY SSF51735 821 865 1.21E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SUPERFAMILY SSF51735 922 1091 1.21E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 ProSitePatterns PS00012 Phosphopantetheine attachment site. 523 538 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 ProSitePatterns PS00012 Phosphopantetheine attachment site. 415 430 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SUPERFAMILY SSF47336 495 570 1.1E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 823 1057 2.1E-8 T 22-04-2016 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SUPERFAMILY SSF52151 235 336 5.23E-47 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SUPERFAMILY SSF52151 36 163 5.23E-47 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Pfam PF14765 Polyketide synthase dehydratase 1142 1437 2.1E-27 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Gene3D G3DSA:1.10.1200.10 498 565 3.6E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Gene3D G3DSA:1.10.1200.10 383 455 3.5E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 39 365 2.1E-18 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 PANTHER PTHR10982 36 324 6.1E-40 T 22-04-2016 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Gene3D G3DSA:3.30.70.250 165 226 4.3E-6 T 22-04-2016 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Gene3D G3DSA:3.40.50.720 821 1060 3.1E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SUPERFAMILY SSF55048 176 231 1.57E-6 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Gene3D G3DSA:3.40.366.10 35 157 7.4E-49 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Gene3D G3DSA:3.40.366.10 233 337 7.4E-49 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 SUPERFAMILY SSF47336 381 462 1.57E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Pfam PF08659 KR domain 828 1054 3.6E-20 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Pfam PF00698 Acyl transferase domain 40 319 6.2E-28 T 22-04-2016 IPR014043 Acyl transferase HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Pfam PF00550 Phosphopantetheine attachment site 498 564 2.4E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain HMPREF9228_RS01040 25a8fd8b1ec73df678ff098e209b21d3 1454 Pfam PF00550 Phosphopantetheine attachment site 390 456 3.8E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain HMPREF9228_RS06825 55c9a34b3cf629db01ca01dac71c8957 434 Gene3D G3DSA:3.20.20.70 68 419 1.4E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS06825 55c9a34b3cf629db01ca01dac71c8957 434 SUPERFAMILY SSF51395 74 418 1.99E-117 T 22-04-2016 HMPREF9228_RS06825 55c9a34b3cf629db01ca01dac71c8957 434 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 78 415 4.4E-75 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 HMPREF9228_RS06825 55c9a34b3cf629db01ca01dac71c8957 434 PANTHER PTHR22893:SF7 62 420 8.4E-155 T 22-04-2016 HMPREF9228_RS06825 55c9a34b3cf629db01ca01dac71c8957 434 PANTHER PTHR22893 62 420 8.4E-155 T 22-04-2016 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 SUPERFAMILY SSF56059 105 325 6.36E-60 T 22-04-2016 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 SUPERFAMILY SSF52440 3 104 5.04E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 SMART SM01210 329 421 4.7E-36 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 4 103 1.5E-29 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 PANTHER PTHR10520 1 422 5.4E-215 T 22-04-2016 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 4 421 6.3E-152 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 Gene3D G3DSA:3.90.600.10 330 421 1.3E-25 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 SMART SM01209 104 296 1.6E-132 T 22-04-2016 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 Gene3D G3DSA:3.30.1490.20 122 191 3.1E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 Gene3D G3DSA:3.30.470.20 192 326 1.5E-56 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 418 4.7E-21 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 Gene3D G3DSA:3.40.50.20 4 96 1.3E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 104 296 1.4E-80 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 SUPERFAMILY SSF51246 328 421 4.94E-25 T 22-04-2016 IPR011054 Rudiment single hybrid motif HMPREF9228_RS06315 2fa3ee815cf9bce2b0a0268e85b69b38 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 3 421 40.982 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 Gene3D G3DSA:3.20.20.70 1 23 2.0E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 Gene3D G3DSA:3.20.20.70 58 283 2.0E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 SUPERFAMILY SSF51366 1 280 4.28E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 PANTHER PTHR19278 1 22 5.8E-56 T 22-04-2016 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 PANTHER PTHR19278 203 257 5.8E-56 T 22-04-2016 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 PANTHER PTHR19278 57 182 5.8E-56 T 22-04-2016 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 3 313 34.717 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 2 280 1.7E-77 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 PANTHER PTHR19278:SF1 1 22 5.8E-56 T 22-04-2016 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 PANTHER PTHR19278:SF1 203 257 5.8E-56 T 22-04-2016 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 PANTHER PTHR19278:SF1 57 182 5.8E-56 T 22-04-2016 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 63 279 7.6E-27 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 107 120 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04285 dd71b0c263699d0c70c1366ee15a95ab 317 SMART SM00934 14 286 6.8E-17 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS08450 81bda9f2ec0691f966ab3acb2ce32d15 332 SUPERFAMILY SSF161098 45 319 2.24E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08450 81bda9f2ec0691f966ab3acb2ce32d15 332 PANTHER PTHR30425:SF0 24 332 2.4E-87 T 22-04-2016 HMPREF9228_RS08450 81bda9f2ec0691f966ab3acb2ce32d15 332 Gene3D G3DSA:1.10.3720.10 39 326 2.6E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08450 81bda9f2ec0691f966ab3acb2ce32d15 332 PANTHER PTHR30425 24 332 2.4E-87 T 22-04-2016 HMPREF9228_RS08450 81bda9f2ec0691f966ab3acb2ce32d15 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 327 5.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08450 81bda9f2ec0691f966ab3acb2ce32d15 332 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 39 327 2.5E-95 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 HMPREF9228_RS02840 797a274c5946afd16907277df11b6ebc 215 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 213 1.8E-55 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 HMPREF9228_RS02840 797a274c5946afd16907277df11b6ebc 215 PANTHER PTHR21235:SF1 5 212 1.5E-68 T 22-04-2016 HMPREF9228_RS02840 797a274c5946afd16907277df11b6ebc 215 PANTHER PTHR21235 5 212 1.5E-68 T 22-04-2016 HMPREF9228_RS02840 797a274c5946afd16907277df11b6ebc 215 SUPERFAMILY SSF52317 2 212 1.21E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS02840 797a274c5946afd16907277df11b6ebc 215 PIRSF PIRSF000495 2 215 3.1E-57 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 HMPREF9228_RS02840 797a274c5946afd16907277df11b6ebc 215 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 214 31.167 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 HMPREF9228_RS02840 797a274c5946afd16907277df11b6ebc 215 Gene3D G3DSA:3.40.50.880 2 213 4.1E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS02840 797a274c5946afd16907277df11b6ebc 215 Pfam PF00117 Glutamine amidotransferase class-I 6 210 3.1E-14 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 HMPREF9228_RS00330 6fab8ef3aaaa2ba19cfd3288d2e09dfa 539 Gene3D G3DSA:3.60.40.10 15 247 5.5E-66 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 HMPREF9228_RS00330 6fab8ef3aaaa2ba19cfd3288d2e09dfa 539 SMART SM00332 2 246 3.6E-20 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 HMPREF9228_RS00330 6fab8ef3aaaa2ba19cfd3288d2e09dfa 539 SMART SM00331 18 248 2.3E-27 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 HMPREF9228_RS00330 6fab8ef3aaaa2ba19cfd3288d2e09dfa 539 Pfam PF00481 Protein phosphatase 2C 16 241 3.1E-13 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 HMPREF9228_RS00330 6fab8ef3aaaa2ba19cfd3288d2e09dfa 539 PANTHER PTHR13832:SF226 4 268 2.6E-50 T 22-04-2016 HMPREF9228_RS00330 6fab8ef3aaaa2ba19cfd3288d2e09dfa 539 SUPERFAMILY SSF81606 15 247 2.49E-59 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 HMPREF9228_RS00330 6fab8ef3aaaa2ba19cfd3288d2e09dfa 539 PANTHER PTHR13832 4 268 2.6E-50 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 HMPREF9228_RS00645 dc93bf1ad10cfb0188cbfdf43b0d8dab 339 Gene3D G3DSA:3.30.450.90 11 106 1.5E-18 T 22-04-2016 HMPREF9228_RS00645 dc93bf1ad10cfb0188cbfdf43b0d8dab 339 SUPERFAMILY SSF52540 5 290 8.89E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00645 dc93bf1ad10cfb0188cbfdf43b0d8dab 339 Gene3D G3DSA:3.40.50.300 114 302 4.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00645 dc93bf1ad10cfb0188cbfdf43b0d8dab 339 PANTHER PTHR30258:SF12 12 302 9.8E-62 T 22-04-2016 HMPREF9228_RS00645 dc93bf1ad10cfb0188cbfdf43b0d8dab 339 Pfam PF00437 Type II/IV secretion system protein 14 289 4.3E-57 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 HMPREF9228_RS00645 dc93bf1ad10cfb0188cbfdf43b0d8dab 339 PANTHER PTHR30258 12 302 9.8E-62 T 22-04-2016 HMPREF9228_RS09630 083fd65c6c6ff8c33c151980aac35860 330 Pfam PF00268 Ribonucleotide reductase, small chain 20 291 3.9E-88 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 HMPREF9228_RS09630 083fd65c6c6ff8c33c151980aac35860 330 PIRSF PIRSF000355 6 327 2.8E-77 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 HMPREF9228_RS09630 083fd65c6c6ff8c33c151980aac35860 330 PANTHER PTHR23409 13 326 8.3E-106 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 HMPREF9228_RS09630 083fd65c6c6ff8c33c151980aac35860 330 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 108 124 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 HMPREF9228_RS09630 083fd65c6c6ff8c33c151980aac35860 330 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 18 330 9.0E-147 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 HMPREF9228_RS09630 083fd65c6c6ff8c33c151980aac35860 330 SUPERFAMILY SSF47240 15 330 1.17E-106 T 22-04-2016 IPR009078 Ferritin-like superfamily HMPREF9228_RS09630 083fd65c6c6ff8c33c151980aac35860 330 Gene3D G3DSA:1.10.620.20 10 285 2.3E-93 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 SUPERFAMILY SSF52540 292 342 2.38E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 SUPERFAMILY SSF52540 385 478 2.38E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 SUPERFAMILY SSF52540 57 198 2.38E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 PANTHER PTHR24031 51 230 2.5E-15 T 22-04-2016 HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 PANTHER PTHR24031 389 426 2.5E-15 T 22-04-2016 HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 PANTHER PTHR24031 298 346 2.5E-15 T 22-04-2016 HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 Gene3D G3DSA:3.40.50.300 388 474 1.6E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 Gene3D G3DSA:3.40.50.300 312 345 1.6E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 Gene3D G3DSA:3.40.50.300 43 228 4.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 SMART SM01142 682 861 1.1E-52 T 22-04-2016 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 SMART SM00487 43 227 2.2E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 Pfam PF00270 DEAD/DEAH box helicase 49 200 3.6E-22 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 SMART SM00490 372 465 6.6E-11 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 Pfam PF00271 Helicase conserved C-terminal domain 386 465 2.0E-4 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 Pfam PF08148 DSHCT (NUC185) domain 686 856 1.9E-33 T 22-04-2016 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 PANTHER PTHR24031:SF122 51 230 2.5E-15 T 22-04-2016 HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 PANTHER PTHR24031:SF122 389 426 2.5E-15 T 22-04-2016 HMPREF9228_RS03980 652e14e1c860f9c21250b028b9e0c2bc 862 PANTHER PTHR24031:SF122 298 346 2.5E-15 T 22-04-2016 HMPREF9228_RS09460 8d2865d31e2f710d56cc403f411ded7a 149 SUPERFAMILY SSF53927 5 148 3.51E-51 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 HMPREF9228_RS09460 8d2865d31e2f710d56cc403f411ded7a 149 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 149 47.891 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 HMPREF9228_RS09460 8d2865d31e2f710d56cc403f411ded7a 149 Gene3D G3DSA:3.40.140.10 4 147 2.5E-57 T 22-04-2016 HMPREF9228_RS09460 8d2865d31e2f710d56cc403f411ded7a 149 Pfam PF14437 MafB19-like deaminase 4 107 9.3E-29 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 HMPREF9228_RS09460 8d2865d31e2f710d56cc403f411ded7a 149 PANTHER PTHR11079:SF72 4 149 5.6E-43 T 22-04-2016 HMPREF9228_RS09460 8d2865d31e2f710d56cc403f411ded7a 149 PANTHER PTHR11079 4 149 5.6E-43 T 22-04-2016 HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 PRINTS PR00050 Cold shock protein signature 4 19 4.27E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 PRINTS PR00050 Cold shock protein signature 25 34 4.27E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 PRINTS PR00050 Cold shock protein signature 44 62 4.27E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 PIRSF PIRSF002599 1 79 1.3E-19 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 Pfam PF00313 'Cold-shock' DNA-binding domain 3 70 1.6E-22 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 PANTHER PTHR11544 1 71 5.3E-17 T 22-04-2016 HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 SUPERFAMILY SSF50249 1 71 1.89E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 Gene3D G3DSA:2.40.50.140 1 69 2.9E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS02440 b1b2903fbbfa3390088538483172259c 79 SMART SM00357 3 71 8.8E-22 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 HMPREF9228_RS07230 24ab1e1aceb44ec55e1c29bb4a93a8a0 174 Gene3D G3DSA:3.40.50.360 1 170 4.2E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain HMPREF9228_RS07230 24ab1e1aceb44ec55e1c29bb4a93a8a0 174 PANTHER PTHR10204 1 174 5.6E-52 T 22-04-2016 HMPREF9228_RS07230 24ab1e1aceb44ec55e1c29bb4a93a8a0 174 Pfam PF02525 Flavodoxin-like fold 1 169 6.6E-44 T 22-04-2016 IPR003680 Flavodoxin-like fold HMPREF9228_RS07230 24ab1e1aceb44ec55e1c29bb4a93a8a0 174 SUPERFAMILY SSF52218 1 172 1.87E-40 T 22-04-2016 IPR029039 Flavoprotein-like domain HMPREF9228_RS07230 24ab1e1aceb44ec55e1c29bb4a93a8a0 174 PANTHER PTHR10204:SF42 1 174 5.6E-52 T 22-04-2016 HMPREF9228_RS00835 0ba0138046ed6e9ae06203b49617c63c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 7.8E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS00835 0ba0138046ed6e9ae06203b49617c63c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 7.8E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS00835 0ba0138046ed6e9ae06203b49617c63c 278 SUPERFAMILY SSF53474 6 266 9.7E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00835 0ba0138046ed6e9ae06203b49617c63c 278 Pfam PF12697 Alpha/beta hydrolase family 21 247 1.1E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS00835 0ba0138046ed6e9ae06203b49617c63c 278 Gene3D G3DSA:3.40.50.1820 7 261 4.9E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00835 0ba0138046ed6e9ae06203b49617c63c 278 PANTHER PTHR10992 5 266 1.2E-25 T 22-04-2016 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 Gene3D G3DSA:3.20.70.20 362 524 6.4E-54 T 22-04-2016 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 Gene3D G3DSA:3.20.70.20 120 309 6.4E-54 T 22-04-2016 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 Gene3D G3DSA:3.20.70.20 594 708 6.4E-54 T 22-04-2016 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 SUPERFAMILY SSF51998 187 715 4.88E-176 T 22-04-2016 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 27 731 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 SUPERFAMILY SSF48168 27 186 3.92E-49 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 583 605 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 PANTHER PTHR11573 60 715 5.7E-227 T 22-04-2016 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 Pfam PF08343 Ribonucleotide reductase N-terminal 28 109 1.6E-28 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 Pfam PF02867 Ribonucleotide reductase, barrel domain 188 710 8.9E-139 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 115 714 6.6E-150 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 113 183 9.6E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 PRINTS PR01183 Ribonucleotide reductase large chain signature 476 498 1.72E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 PRINTS PR01183 Ribonucleotide reductase large chain signature 263 282 1.72E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 PRINTS PR01183 Ribonucleotide reductase large chain signature 594 621 1.72E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 HMPREF9228_RS09635 6a24de99fae44a2bf44ac01a6a2d42f2 731 PRINTS PR01183 Ribonucleotide reductase large chain signature 394 405 1.72E-22 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 HMPREF9228_RS04435 0730a6d26770a4b49592a2f95b92b546 416 Pfam PF00534 Glycosyl transferases group 1 205 389 8.5E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 HMPREF9228_RS04435 0730a6d26770a4b49592a2f95b92b546 416 SUPERFAMILY SSF53756 1 413 7.85E-89 T 22-04-2016 HMPREF9228_RS04435 0730a6d26770a4b49592a2f95b92b546 416 Gene3D G3DSA:3.40.50.2000 176 389 3.2E-47 T 22-04-2016 HMPREF9228_RS04435 0730a6d26770a4b49592a2f95b92b546 416 PANTHER PTHR12526 1 413 2.5E-144 T 22-04-2016 HMPREF9228_RS04435 0730a6d26770a4b49592a2f95b92b546 416 PANTHER PTHR12526:SF355 1 413 2.5E-144 T 22-04-2016 HMPREF9228_RS04435 0730a6d26770a4b49592a2f95b92b546 416 Pfam PF13439 Glycosyltransferase Family 4 15 190 1.0E-29 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain HMPREF9228_RS04435 0730a6d26770a4b49592a2f95b92b546 416 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 1 411 1.2E-208 T 22-04-2016 IPR011875 Glycogen synthase, corynebacterial KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00934 HMPREF9228_RS01380 3d9819f119811f2eb8d4beb909bb4100 475 Pfam PF02646 RmuC family 140 431 4.9E-91 T 22-04-2016 IPR003798 DNA recombination RmuC HMPREF9228_RS01380 3d9819f119811f2eb8d4beb909bb4100 475 PANTHER PTHR30563 61 464 2.5E-60 T 22-04-2016 HMPREF9228_RS08685 c505671265dd4870ddb66081718b4bdb 295 Gene3D G3DSA:3.30.930.10 11 229 2.0E-38 T 22-04-2016 HMPREF9228_RS08685 c505671265dd4870ddb66081718b4bdb 295 PANTHER PTHR12835 11 292 3.7E-28 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 HMPREF9228_RS08685 c505671265dd4870ddb66081718b4bdb 295 SUPERFAMILY SSF55681 13 212 5.14E-31 T 22-04-2016 HMPREF9228_RS08685 c505671265dd4870ddb66081718b4bdb 295 Pfam PF03099 Biotin/lipoate A/B protein ligase family 57 158 1.1E-7 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 Gene3D G3DSA:4.10.640.10 15 79 1.8E-30 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 SUPERFAMILY SSF46911 10 79 1.06E-26 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 Pfam PF01084 Ribosomal protein S18 24 75 5.2E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 PANTHER PTHR13479 8 79 1.3E-28 T 22-04-2016 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 ProSitePatterns PS00057 Ribosomal protein S18 signature. 28 51 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 PRINTS PR00974 Ribosomal protein S18 family signature 35 45 7.0E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 PRINTS PR00974 Ribosomal protein S18 family signature 45 52 7.0E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 PRINTS PR00974 Ribosomal protein S18 family signature 67 77 7.0E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 PRINTS PR00974 Ribosomal protein S18 family signature 53 67 7.0E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 28 77 3.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 10 80 20.077 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01295 e4c7728fbbfab8b47430ec87ff1026e3 82 TIGRFAM TIGR00165 S18: ribosomal protein bS18 13 78 4.8E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09095 b79d098fdaf60fe52295ca830e2d4cc0 340 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 11 326 4.6E-140 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 HMPREF9228_RS09095 b79d098fdaf60fe52295ca830e2d4cc0 340 PANTHER PTHR10366:SF437 10 340 4.1E-181 T 22-04-2016 HMPREF9228_RS09095 b79d098fdaf60fe52295ca830e2d4cc0 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 312 4.1E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09095 b79d098fdaf60fe52295ca830e2d4cc0 340 Gene3D G3DSA:3.90.25.10 188 330 3.3E-46 T 22-04-2016 HMPREF9228_RS09095 b79d098fdaf60fe52295ca830e2d4cc0 340 SUPERFAMILY SSF51735 10 331 4.03E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09095 b79d098fdaf60fe52295ca830e2d4cc0 340 Gene3D G3DSA:3.40.50.720 4 187 1.5E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09095 b79d098fdaf60fe52295ca830e2d4cc0 340 PANTHER PTHR10366 10 340 4.1E-181 T 22-04-2016 HMPREF9228_RS05815 156ad9411466cc2fa8090a042dd24b24 351 PANTHER PTHR31528 1 280 4.4E-40 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 HMPREF9228_RS05815 156ad9411466cc2fa8090a042dd24b24 351 Pfam PF09084 NMT1/THI5 like 51 266 2.7E-49 T 22-04-2016 IPR015168 SsuA/THI5-like HMPREF9228_RS05815 156ad9411466cc2fa8090a042dd24b24 351 SUPERFAMILY SSF53850 44 326 2.31E-19 T 22-04-2016 HMPREF9228_RS04515 a5d036852ffff82c7277765dc4693b81 474 Gene3D G3DSA:3.40.50.1220 296 472 1.4E-76 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain HMPREF9228_RS04515 a5d036852ffff82c7277765dc4693b81 474 SUPERFAMILY SSF52467 297 471 1.2E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain HMPREF9228_RS04515 a5d036852ffff82c7277765dc4693b81 474 PIRSF PIRSF000204 9 471 1.8E-158 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 HMPREF9228_RS04515 a5d036852ffff82c7277765dc4693b81 474 PANTHER PTHR10160 15 474 1.2E-188 T 22-04-2016 HMPREF9228_RS04515 a5d036852ffff82c7277765dc4693b81 474 PANTHER PTHR10160:SF24 15 474 1.2E-188 T 22-04-2016 HMPREF9228_RS04515 a5d036852ffff82c7277765dc4693b81 474 Pfam PF02233 NAD(P) transhydrogenase beta subunit 15 467 1.7E-165 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 11 135 3.0E-14 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 PANTHER PTHR22600 90 374 2.8E-30 T 22-04-2016 HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 SUPERFAMILY SSF55545 10 137 6.73E-19 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 139 385 1.8E-12 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 Gene3D G3DSA:3.20.20.80 125 465 3.1E-49 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 PRINTS PR00738 Glycosyl hydrolase family 20 signature 208 225 5.4E-11 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 PRINTS PR00738 Glycosyl hydrolase family 20 signature 133 150 5.4E-11 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 PRINTS PR00738 Glycosyl hydrolase family 20 signature 100 120 5.4E-11 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 Gene3D G3DSA:3.30.379.10 10 124 2.3E-21 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like HMPREF9228_RS07770 4c671e13cb9d0ea79e9453723a83287a 673 SUPERFAMILY SSF51445 139 465 3.16E-65 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 SUPERFAMILY SSF53850 14 251 2.33E-58 T 22-04-2016 HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 PANTHER PTHR18966:SF207 36 251 4.5E-40 T 22-04-2016 HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 SMART SM00079 37 251 0.0054 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 Gene3D G3DSA:3.40.190.10 117 220 2.2E-27 T 22-04-2016 HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 PANTHER PTHR18966 36 251 4.5E-40 T 22-04-2016 HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 Gene3D G3DSA:3.40.190.10 221 253 3.7E-31 T 22-04-2016 HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 Gene3D G3DSA:3.40.190.10 35 116 3.7E-31 T 22-04-2016 HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 SMART SM00062 37 261 2.7E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS02535 30130aac1737dfe3ce767de628a4bb60 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 250 5.3E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 Pfam PF09383 NIL domain 297 347 5.9E-6 T 22-04-2016 IPR018449 NIL domain HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 SUPERFAMILY SSF52540 5 247 2.03E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 SUPERFAMILY SSF55021 295 350 7.33E-7 T 22-04-2016 HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 SMART SM00382 37 225 9.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 Gene3D G3DSA:3.30.70.260 244 348 2.0E-8 T 22-04-2016 HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 Gene3D G3DSA:3.40.50.300 4 243 3.1E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 PANTHER PTHR24220:SF549 7 262 1.1E-132 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 PANTHER PTHR24220 7 262 1.1E-132 T 22-04-2016 HMPREF9228_RS05165 aea115d33310e9af8c7077b57666e4e6 400 Pfam PF00005 ABC transporter 29 176 4.6E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS02390 3e84f002cf80bdfb95ed42b382bc5cec 214 Pfam PF09819 ABC-type cobalt transport system, permease component 26 146 1.7E-32 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted HMPREF9228_RS02390 3e84f002cf80bdfb95ed42b382bc5cec 214 PIRSF PIRSF037394 15 214 1.3E-60 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 SUPERFAMILY SSF55781 92 264 3.07E-35 T 22-04-2016 IPR029016 GAF domain-like HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 PANTHER PTHR30136 13 265 8.3E-103 T 22-04-2016 HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 Pfam PF01614 Bacterial transcriptional regulator 155 259 2.2E-18 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 Gene3D G3DSA:1.10.10.10 35 105 3.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 SUPERFAMILY SSF46785 37 105 3.12E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 Pfam PF09339 IclR helix-turn-helix domain 40 87 2.3E-11 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 PANTHER PTHR30136:SF18 13 265 8.3E-103 T 22-04-2016 HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 Gene3D G3DSA:3.30.450.40 106 264 1.4E-42 T 22-04-2016 IPR029016 GAF domain-like HMPREF9228_RS08925 792ba1a329f7d963f86619d900c33ccc 269 SMART SM00346 37 123 5.0E-17 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 Gene3D G3DSA:1.10.260.40 3 54 2.7E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 Gene3D G3DSA:3.40.50.2300 55 174 4.7E-25 T 22-04-2016 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 Gene3D G3DSA:3.40.50.2300 175 327 7.3E-33 T 22-04-2016 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 PANTHER PTHR30146 1 353 2.1E-65 T 22-04-2016 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 Pfam PF13377 Periplasmic binding protein-like domain 169 348 8.8E-27 T 22-04-2016 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 SMART SM00354 2 72 3.2E-24 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 PANTHER PTHR30146:SF30 1 353 2.1E-65 T 22-04-2016 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 SUPERFAMILY SSF53822 63 350 1.18E-39 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.2E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS01705 19f9d1690dca0ee289f05fe6803f8e76 353 SUPERFAMILY SSF47413 3 60 6.75E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS06960 ab209e5d5368297dcaca6acf1e64c71f 493 SUPERFAMILY SSF53098 131 260 8.34E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS06960 ab209e5d5368297dcaca6acf1e64c71f 493 Gene3D G3DSA:3.30.420.10 151 268 1.7E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS06960 ab209e5d5368297dcaca6acf1e64c71f 493 Gene3D G3DSA:1.10.10.60 8 38 1.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS06960 ab209e5d5368297dcaca6acf1e64c71f 493 SUPERFAMILY SSF46689 3 109 9.68E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS06960 ab209e5d5368297dcaca6acf1e64c71f 493 PANTHER PTHR35004 5 413 8.2E-43 T 22-04-2016 HMPREF9228_RS06960 ab209e5d5368297dcaca6acf1e64c71f 493 Pfam PF00665 Integrase core domain 131 251 8.0E-12 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS06960 ab209e5d5368297dcaca6acf1e64c71f 493 PANTHER PTHR35004:SF2 5 413 8.2E-43 T 22-04-2016 HMPREF9228_RS05675 ab209e5d5368297dcaca6acf1e64c71f 493 SUPERFAMILY SSF53098 131 260 8.34E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05675 ab209e5d5368297dcaca6acf1e64c71f 493 Gene3D G3DSA:3.30.420.10 151 268 1.7E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05675 ab209e5d5368297dcaca6acf1e64c71f 493 Gene3D G3DSA:1.10.10.60 8 38 1.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS05675 ab209e5d5368297dcaca6acf1e64c71f 493 SUPERFAMILY SSF46689 3 109 9.68E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS05675 ab209e5d5368297dcaca6acf1e64c71f 493 PANTHER PTHR35004 5 413 8.2E-43 T 22-04-2016 HMPREF9228_RS05675 ab209e5d5368297dcaca6acf1e64c71f 493 Pfam PF00665 Integrase core domain 131 251 8.0E-12 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS05675 ab209e5d5368297dcaca6acf1e64c71f 493 PANTHER PTHR35004:SF2 5 413 8.2E-43 T 22-04-2016 HMPREF9228_RS02170 ab209e5d5368297dcaca6acf1e64c71f 493 SUPERFAMILY SSF53098 131 260 8.34E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02170 ab209e5d5368297dcaca6acf1e64c71f 493 Gene3D G3DSA:3.30.420.10 151 268 1.7E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02170 ab209e5d5368297dcaca6acf1e64c71f 493 Gene3D G3DSA:1.10.10.60 8 38 1.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS02170 ab209e5d5368297dcaca6acf1e64c71f 493 SUPERFAMILY SSF46689 3 109 9.68E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS02170 ab209e5d5368297dcaca6acf1e64c71f 493 PANTHER PTHR35004 5 413 8.2E-43 T 22-04-2016 HMPREF9228_RS02170 ab209e5d5368297dcaca6acf1e64c71f 493 Pfam PF00665 Integrase core domain 131 251 8.0E-12 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS02170 ab209e5d5368297dcaca6acf1e64c71f 493 PANTHER PTHR35004:SF2 5 413 8.2E-43 T 22-04-2016 HMPREF9228_RS00880 6a5fe81a8df7e33050e831bad7e5ad38 422 SUPERFAMILY SSF52980 335 394 7.29E-5 T 22-04-2016 IPR011335 Restriction endonuclease type II-like HMPREF9228_RS00880 6a5fe81a8df7e33050e831bad7e5ad38 422 Pfam PF13173 AAA domain 18 138 1.3E-14 T 22-04-2016 HMPREF9228_RS00880 6a5fe81a8df7e33050e831bad7e5ad38 422 SUPERFAMILY SSF52540 11 188 1.32E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00880 6a5fe81a8df7e33050e831bad7e5ad38 422 Pfam PF13635 Domain of unknown function (DUF4143) 251 364 9.5E-14 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 HMPREF9228_RS00880 6a5fe81a8df7e33050e831bad7e5ad38 422 PANTHER PTHR33295 20 420 1.7E-45 T 22-04-2016 HMPREF9228_RS00880 6a5fe81a8df7e33050e831bad7e5ad38 422 PANTHER PTHR33295:SF5 20 420 1.7E-45 T 22-04-2016 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 Gene3D G3DSA:3.30.565.10 232 265 2.7E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 Gene3D G3DSA:3.30.565.10 301 424 2.7E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 SMART SM00388 179 245 3.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 SMART SM00387 308 420 7.5E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 244 2.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 7.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 7.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 7.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 7.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 Gene3D G3DSA:1.10.287.130 171 231 5.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 418 1.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 PANTHER PTHR24423 100 426 4.2E-63 T 22-04-2016 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 PANTHER PTHR24423 61 83 4.2E-63 T 22-04-2016 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 SUPERFAMILY SSF47384 162 244 9.42E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS08470 2b7a152fca18ceecad50d589f92498ad 431 SUPERFAMILY SSF55874 303 423 1.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 PANTHER PTHR23135:SF4 28 510 1.2E-73 T 22-04-2016 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 41 507 3.2E-79 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 PANTHER PTHR23135 28 510 1.2E-73 T 22-04-2016 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 Gene3D G3DSA:3.40.1390.10 37 113 8.6E-4 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 Pfam PF02875 Mur ligase family, glutamate ligase domain 350 429 3.1E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 Gene3D G3DSA:3.90.190.20 354 500 3.4E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 Pfam PF08245 Mur ligase middle domain 123 329 4.5E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 SUPERFAMILY SSF63418 34 114 4.97E-9 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 Gene3D G3DSA:3.40.1190.10 114 353 1.6E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 SUPERFAMILY SSF53244 350 511 5.49E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS03045 cdef00b75f4fb294c83981cc1d9af6b7 515 SUPERFAMILY SSF53623 86 363 1.11E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 SUPERFAMILY SSF56655 57 290 1.7E-35 T 22-04-2016 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 PANTHER PTHR20854:SF4 99 287 1.6E-19 T 22-04-2016 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 Gene3D G3DSA:3.40.190.80 177 289 3.0E-25 T 22-04-2016 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 PANTHER PTHR20854 99 287 1.6E-19 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 Gene3D G3DSA:3.30.540.10 82 176 2.4E-13 T 22-04-2016 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 Pfam PF00459 Inositol monophosphatase family 86 284 2.7E-19 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 PRINTS PR00377 Inositol monophosphatase superfamily signature 202 223 1.6E-9 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 PRINTS PR00377 Inositol monophosphatase superfamily signature 94 110 1.6E-9 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 HMPREF9228_RS02360 bbbf87fbff39530ba26866d84212a862 298 PRINTS PR00377 Inositol monophosphatase superfamily signature 236 260 1.6E-9 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 HMPREF9228_RS01135 a2b9f9717b2d3cc4370a276a65a7222e 464 PANTHER PTHR30489 237 464 6.4E-30 T 22-04-2016 HMPREF9228_RS01135 a2b9f9717b2d3cc4370a276a65a7222e 464 PANTHER PTHR30489 6 163 6.4E-30 T 22-04-2016 HMPREF9228_RS01135 a2b9f9717b2d3cc4370a276a65a7222e 464 Pfam PF02687 FtsX-like permease family 344 457 4.0E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS09355 6bf599e018f03aef08ebeba3183d25b7 448 Gene3D G3DSA:3.40.190.10 52 155 1.6E-14 T 22-04-2016 HMPREF9228_RS09355 6bf599e018f03aef08ebeba3183d25b7 448 Pfam PF13416 Bacterial extracellular solute-binding protein 60 379 2.8E-53 T 22-04-2016 HMPREF9228_RS09355 6bf599e018f03aef08ebeba3183d25b7 448 Gene3D G3DSA:3.40.190.10 156 372 2.5E-28 T 22-04-2016 HMPREF9228_RS09355 6bf599e018f03aef08ebeba3183d25b7 448 SUPERFAMILY SSF53850 40 440 5.98E-35 T 22-04-2016 HMPREF9228_RS09355 6bf599e018f03aef08ebeba3183d25b7 448 PANTHER PTHR30061 1 425 3.1E-21 T 22-04-2016 HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 SMART SM00987 52 217 3.3E-29 T 22-04-2016 HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 SUPERFAMILY SSF52141 8 229 4.58E-71 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 228 32.951 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 PANTHER PTHR11264 1 229 8.7E-116 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 60 69 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 PANTHER PTHR11264:SF5 1 229 8.7E-116 T 22-04-2016 HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 Pfam PF03167 Uracil DNA glycosylase superfamily 57 214 3.6E-16 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 Gene3D G3DSA:3.40.470.10 4 229 8.2E-80 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like HMPREF9228_RS02430 fb3f01487674c773a2ceb380d032fe58 229 SMART SM00986 52 217 3.3E-29 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 12 400 1.0E-157 T 22-04-2016 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 Gene3D G3DSA:3.40.630.10 13 203 3.9E-40 T 22-04-2016 HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 Gene3D G3DSA:3.40.630.10 345 399 3.9E-40 T 22-04-2016 HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 Pfam PF07687 Peptidase dimerisation domain 195 287 1.6E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 Pfam PF01546 Peptidase family M20/M25/M40 71 399 6.3E-20 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 SUPERFAMILY SSF53187 9 194 8.05E-39 T 22-04-2016 HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 SUPERFAMILY SSF53187 323 400 8.05E-39 T 22-04-2016 HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 SUPERFAMILY SSF55031 195 296 1.57E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 Gene3D G3DSA:3.30.70.360 204 288 1.0E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 PANTHER PTHR11014 32 93 2.4E-41 T 22-04-2016 HMPREF9228_RS08765 8521e741ac94bf33660d02104cc9e75b 401 PANTHER PTHR11014 110 398 2.4E-41 T 22-04-2016 HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 SUPERFAMILY SSF53955 107 309 1.74E-64 T 22-04-2016 IPR023346 Lysozyme-like domain HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 PANTHER PTHR32282:SF8 46 672 1.5E-121 T 22-04-2016 HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 PANTHER PTHR32282 46 672 1.5E-121 T 22-04-2016 HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 Pfam PF00905 Penicillin binding protein transpeptidase domain 384 625 8.6E-28 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 Pfam PF00912 Transglycosylase 120 291 2.6E-56 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 Gene3D G3DSA:3.40.710.10 293 687 4.0E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 Gene3D G3DSA:1.10.3810.10 120 292 8.2E-63 T 22-04-2016 HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 SUPERFAMILY SSF56601 273 295 3.19E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS00900 92987ed693fa5779a639d2b848ce186e 784 SUPERFAMILY SSF56601 324 677 3.19E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 Gene3D G3DSA:3.40.50.980 32 205 2.5E-30 T 22-04-2016 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 ProSitePatterns PS00455 Putative AMP-binding domain signature. 199 210 - T 22-04-2016 IPR020845 AMP-binding, conserved site HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 SUPERFAMILY SSF56801 353 607 1.22E-108 T 22-04-2016 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 SUPERFAMILY SSF56801 31 304 1.22E-108 T 22-04-2016 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 Gene3D G3DSA:3.30.300.30 476 598 6.7E-4 T 22-04-2016 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 Gene3D G3DSA:2.30.38.10 417 472 3.4E-18 T 22-04-2016 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 Pfam PF00501 AMP-binding enzyme 38 478 3.1E-87 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 Gene3D G3DSA:3.40.50.980 206 299 3.9E-29 T 22-04-2016 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 Gene3D G3DSA:3.40.50.980 350 415 3.9E-29 T 22-04-2016 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 PANTHER PTHR24096 2 614 3.9E-174 T 22-04-2016 HMPREF9228_RS07235 52d3f2c7c9e2661000a219b7ef25b4ea 614 PANTHER PTHR24096:SF193 2 614 3.9E-174 T 22-04-2016 HMPREF9228_RS05475 ca4157788d827a8b8dc695fbcba7cbc6 333 SUPERFAMILY SSF53067 8 129 1.81E-30 T 22-04-2016 HMPREF9228_RS05475 ca4157788d827a8b8dc695fbcba7cbc6 333 Gene3D G3DSA:3.30.420.40 3 127 2.8E-43 T 22-04-2016 HMPREF9228_RS05475 ca4157788d827a8b8dc695fbcba7cbc6 333 SUPERFAMILY SSF53067 137 329 1.5E-34 T 22-04-2016 HMPREF9228_RS05475 ca4157788d827a8b8dc695fbcba7cbc6 333 Gene3D G3DSA:3.30.420.150 136 329 1.1E-61 T 22-04-2016 HMPREF9228_RS05475 ca4157788d827a8b8dc695fbcba7cbc6 333 Pfam PF02541 Ppx/GppA phosphatase family 22 323 5.2E-49 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 HMPREF9228_RS05475 ca4157788d827a8b8dc695fbcba7cbc6 333 PANTHER PTHR30005 8 325 7.6E-87 T 22-04-2016 HMPREF9228_RS05475 ca4157788d827a8b8dc695fbcba7cbc6 333 PANTHER PTHR30005:SF1 8 325 7.6E-87 T 22-04-2016 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 74 412 1.1E-45 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 Gene3D G3DSA:3.30.428.10 115 240 2.3E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 SUPERFAMILY SSF54197 69 240 1.25E-46 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 PIRSF PIRSF000808 64 412 2.4E-126 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 248 361 5.6E-15 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 PANTHER PTHR11943 59 410 1.1E-89 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 SUPERFAMILY SSF54197 245 410 4.59E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 73 240 3.6E-30 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 HMPREF9228_RS06810 22d67b8f0a91dd929833e6d4dc38a6b7 416 Gene3D G3DSA:3.30.428.10 242 414 2.3E-53 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 Gene3D G3DSA:3.40.50.300 6 177 8.9E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 SUPERFAMILY SSF52540 8 172 2.21E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 PANTHER PTHR21090 167 540 3.3E-129 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 PRINTS PR01100 Shikimate kinase family signature 102 119 3.3E-17 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-17 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-17 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-17 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-17 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 Hamap MF_00109 Shikimate kinase [aroK]. 4 173 23.264 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 Gene3D G3DSA:3.40.50.1970 185 343 3.1E-53 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 Gene3D G3DSA:1.20.1090.10 345 535 1.5E-58 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 SUPERFAMILY SSF56796 184 536 4.42E-97 T 22-04-2016 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 175 537 35.478 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 Pfam PF01761 3-dehydroquinate synthase 239 504 1.6E-90 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 Pfam PF01202 Shikimate kinase 13 171 3.7E-37 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 HMPREF9228_RS04620 4491c5c2d248cf233ab011bc32382f99 540 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 187 533 6.6E-105 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 HMPREF9228_RS08810 0e792b4313b20e5b3c34bf61ba6a2dd1 286 Gene3D G3DSA:3.40.50.300 80 282 1.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08810 0e792b4313b20e5b3c34bf61ba6a2dd1 286 SMART SM00382 93 282 5.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS08810 0e792b4313b20e5b3c34bf61ba6a2dd1 286 ProSitePatterns PS00211 ABC transporters family signature. 205 219 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS08810 0e792b4313b20e5b3c34bf61ba6a2dd1 286 Pfam PF00005 ABC transporter 84 232 2.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS08810 0e792b4313b20e5b3c34bf61ba6a2dd1 286 PANTHER PTHR24220:SF111 84 282 4.5E-81 T 22-04-2016 HMPREF9228_RS08810 0e792b4313b20e5b3c34bf61ba6a2dd1 286 PANTHER PTHR24220 84 282 4.5E-81 T 22-04-2016 HMPREF9228_RS08810 0e792b4313b20e5b3c34bf61ba6a2dd1 286 SUPERFAMILY SSF52540 74 282 2.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07290 1884109177692ec83a8dfba551904ca7 339 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 339 1.3E-156 T 22-04-2016 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 HMPREF9228_RS07290 1884109177692ec83a8dfba551904ca7 339 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 105 164 1.7E-15 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 HMPREF9228_RS07290 1884109177692ec83a8dfba551904ca7 339 SUPERFAMILY SSF51161 160 321 1.17E-34 T 22-04-2016 IPR011004 Trimeric LpxA-like HMPREF9228_RS07290 1884109177692ec83a8dfba551904ca7 339 SUPERFAMILY SSF51161 70 129 1.17E-34 T 22-04-2016 IPR011004 Trimeric LpxA-like HMPREF9228_RS07290 1884109177692ec83a8dfba551904ca7 339 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 4 337 43.551 T 22-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 HMPREF9228_RS07290 1884109177692ec83a8dfba551904ca7 339 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 246 278 3.9E-15 T 22-04-2016 IPR001451 Hexapeptide repeat HMPREF9228_RS07290 1884109177692ec83a8dfba551904ca7 339 Gene3D G3DSA:2.160.10.10 166 337 1.7E-36 T 22-04-2016 HMPREF9228_RS01925 cbebc51b18d07662949fcc7e3474672b 242 Gene3D G3DSA:3.40.50.880 3 226 4.7E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS01925 cbebc51b18d07662949fcc7e3474672b 242 PRINTS PR00096 Glutamine amidotransferase superfamily signature 87 98 6.6E-5 T 22-04-2016 HMPREF9228_RS01925 cbebc51b18d07662949fcc7e3474672b 242 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 6.6E-5 T 22-04-2016 HMPREF9228_RS01925 cbebc51b18d07662949fcc7e3474672b 242 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 6.6E-5 T 22-04-2016 HMPREF9228_RS01925 cbebc51b18d07662949fcc7e3474672b 242 Pfam PF00117 Glutamine amidotransferase class-I 47 182 7.4E-15 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 HMPREF9228_RS01925 cbebc51b18d07662949fcc7e3474672b 242 PANTHER PTHR11922:SF11 19 213 1.3E-37 T 22-04-2016 HMPREF9228_RS01925 cbebc51b18d07662949fcc7e3474672b 242 PANTHER PTHR11922 19 213 1.3E-37 T 22-04-2016 HMPREF9228_RS01925 cbebc51b18d07662949fcc7e3474672b 242 SUPERFAMILY SSF52317 40 193 1.63E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 214 3.7E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 SMART SM00421 160 217 2.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 Pfam PF00072 Response regulator receiver domain 15 122 1.7E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 PANTHER PTHR26402 12 214 4.5E-24 T 22-04-2016 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 SUPERFAMILY SSF46894 156 222 4.08E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 1.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 1.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 1.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 SMART SM00448 12 127 2.4E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 SUPERFAMILY SSF52172 10 129 4.84E-16 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 Gene3D G3DSA:1.10.10.10 158 222 4.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 Gene3D G3DSA:3.40.50.2300 12 131 2.5E-16 T 22-04-2016 HMPREF9228_RS00255 498ae00b3c97dfe314e8996ac0f0e574 223 PANTHER PTHR26402:SF151 12 214 4.5E-24 T 22-04-2016 HMPREF9228_RS01250 d65d664fbf6fafbd2b1ec45b99b58aa2 250 PANTHER PTHR21343 5 250 2.6E-65 T 22-04-2016 HMPREF9228_RS01250 d65d664fbf6fafbd2b1ec45b99b58aa2 250 SUPERFAMILY SSF52317 22 208 1.31E-17 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS01250 d65d664fbf6fafbd2b1ec45b99b58aa2 250 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 7 199 4.8E-35 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 HMPREF9228_RS01250 d65d664fbf6fafbd2b1ec45b99b58aa2 250 Gene3D G3DSA:3.40.50.880 22 206 6.4E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS01250 d65d664fbf6fafbd2b1ec45b99b58aa2 250 PANTHER PTHR21343:SF9 5 250 2.6E-65 T 22-04-2016 HMPREF9228_RS07520 9349964276142c9163330e93c8314a1b 530 Pfam PF01594 Domain of unknown function DUF20 54 376 2.4E-48 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like HMPREF9228_RS07520 9349964276142c9163330e93c8314a1b 530 PANTHER PTHR21716 38 397 7.4E-56 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 Gene3D G3DSA:3.30.390.10 4 125 2.6E-51 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 Hamap MF_00318 Enolase [eno]. 2 411 43.273 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 SMART SM01193 4 134 5.8E-88 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 SMART SM01192 139 425 1.0E-196 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 SUPERFAMILY SSF54826 3 139 4.27E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 PANTHER PTHR11902 2 419 1.5E-239 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 SUPERFAMILY SSF51604 139 424 1.7E-119 T 22-04-2016 IPR029065 Enolase C-terminal domain-like HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 PIRSF PIRSF001400 1 425 4.1E-183 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 PRINTS PR00148 Enolase signature 311 322 1.0E-39 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 PRINTS PR00148 Enolase signature 363 380 1.0E-39 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 PRINTS PR00148 Enolase signature 37 51 1.0E-39 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 PRINTS PR00148 Enolase signature 161 174 1.0E-39 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 PRINTS PR00148 Enolase signature 334 348 1.0E-39 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 PRINTS PR00148 Enolase signature 107 123 1.0E-39 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 7.0E-122 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 2.9E-190 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 Gene3D G3DSA:3.20.20.120 128 425 9.6E-126 T 22-04-2016 IPR029065 Enolase C-terminal domain-like HMPREF9228_RS05490 98027f1fcfc677e463699034937a062e 432 Pfam PF03952 Enolase, N-terminal domain 4 134 2.6E-56 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 HMPREF9228_RS02765 9fcf680d020c478ea3f5c1bd702d3c75 625 Pfam PF06100 MCRA family 23 555 2.4E-219 T 22-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 HMPREF9228_RS02765 9fcf680d020c478ea3f5c1bd702d3c75 625 PANTHER PTHR37417 1 257 0.0 T 22-04-2016 HMPREF9228_RS02765 9fcf680d020c478ea3f5c1bd702d3c75 625 PANTHER PTHR37417 292 622 0.0 T 22-04-2016 HMPREF9228_RS02765 9fcf680d020c478ea3f5c1bd702d3c75 625 Gene3D G3DSA:3.50.50.60 222 262 6.4E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS02765 9fcf680d020c478ea3f5c1bd702d3c75 625 Gene3D G3DSA:3.50.50.60 20 76 6.4E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS02765 9fcf680d020c478ea3f5c1bd702d3c75 625 PANTHER PTHR37417:SF1 1 257 0.0 T 22-04-2016 HMPREF9228_RS02765 9fcf680d020c478ea3f5c1bd702d3c75 625 PANTHER PTHR37417:SF1 292 622 0.0 T 22-04-2016 HMPREF9228_RS02765 9fcf680d020c478ea3f5c1bd702d3c75 625 SUPERFAMILY SSF51905 24 256 3.29E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS07790 03c47906e9a38ba11bc934292a27fd17 211 Gene3D G3DSA:3.40.50.300 3 207 2.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07790 03c47906e9a38ba11bc934292a27fd17 211 PANTHER PTHR24220 6 211 2.0E-76 T 22-04-2016 HMPREF9228_RS07790 03c47906e9a38ba11bc934292a27fd17 211 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS07790 03c47906e9a38ba11bc934292a27fd17 211 Pfam PF00005 ABC transporter 22 158 9.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07790 03c47906e9a38ba11bc934292a27fd17 211 SMART SM00382 31 207 1.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07790 03c47906e9a38ba11bc934292a27fd17 211 PANTHER PTHR24220:SF587 6 211 2.0E-76 T 22-04-2016 HMPREF9228_RS07790 03c47906e9a38ba11bc934292a27fd17 211 SUPERFAMILY SSF52540 19 207 6.61E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01665 072ba37a7108e07fdce77b61d37dbe9a 290 PANTHER PTHR30193 4 288 1.3E-14 T 22-04-2016 HMPREF9228_RS01665 072ba37a7108e07fdce77b61d37dbe9a 290 Gene3D G3DSA:1.10.3720.10 29 285 1.8E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01665 072ba37a7108e07fdce77b61d37dbe9a 290 SUPERFAMILY SSF161098 25 275 3.74E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01665 072ba37a7108e07fdce77b61d37dbe9a 290 PANTHER PTHR30193:SF20 4 288 1.3E-14 T 22-04-2016 HMPREF9228_RS01665 072ba37a7108e07fdce77b61d37dbe9a 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 283 7.6E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 PANTHER PTHR30627:SF1 134 586 5.7E-113 T 22-04-2016 HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 Gene3D G3DSA:3.40.710.10 258 574 1.5E-64 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 Gene3D G3DSA:3.90.1310.10 154 257 7.9E-24 T 22-04-2016 HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 PANTHER PTHR30627 2 109 5.7E-113 T 22-04-2016 HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 PANTHER PTHR30627 134 586 5.7E-113 T 22-04-2016 HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 PANTHER PTHR30627:SF1 2 109 5.7E-113 T 22-04-2016 HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 Pfam PF00905 Penicillin binding protein transpeptidase domain 276 568 2.3E-52 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 228 2.0E-10 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 SUPERFAMILY SSF56601 200 584 6.84E-66 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS02930 a0f8611956dee03480275f9c3be8d641 592 SUPERFAMILY SSF56519 57 250 8.76E-29 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 719 770 1.9E-10 T 22-04-2016 IPR005194 Glycoside hydrolase family 65, C-terminal HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 SUPERFAMILY SSF74650 14 267 6.28E-52 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 322 712 6.7E-122 T 22-04-2016 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 Gene3D G3DSA:1.50.10.10 316 699 1.3E-135 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 23 262 9.5E-54 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 Gene3D G3DSA:2.60.420.10 700 770 4.2E-18 T 22-04-2016 HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 Gene3D G3DSA:2.70.98.40 15 268 7.8E-64 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 PIRSF PIRSF036289 12 777 9.0E-217 T 22-04-2016 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 SUPERFAMILY SSF48208 271 768 3.4E-114 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 HMPREF9228_RS08515 a9b523a6651d5e1f914848ec01c6e49a 777 PANTHER PTHR11051 10 747 6.5E-151 T 22-04-2016 HMPREF9228_RS04935 54b15e231f4079d528560481354b8869 121 PANTHER PTHR31503:SF17 1 118 1.4E-30 T 22-04-2016 HMPREF9228_RS04935 54b15e231f4079d528560481354b8869 121 PIRSF PIRSF028777 1 121 5.3E-42 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 HMPREF9228_RS04935 54b15e231f4079d528560481354b8869 121 Pfam PF03733 Inner membrane component domain 66 115 5.0E-21 T 22-04-2016 IPR005185 Inner membrane component domain HMPREF9228_RS04935 54b15e231f4079d528560481354b8869 121 Pfam PF03733 Inner membrane component domain 4 54 4.4E-18 T 22-04-2016 IPR005185 Inner membrane component domain HMPREF9228_RS04935 54b15e231f4079d528560481354b8869 121 PANTHER PTHR31503 1 118 1.4E-30 T 22-04-2016 HMPREF9228_RS08265 e5423f05e3865b75832901fd13a972b1 149 SUPERFAMILY SSF52161 5 143 3.14E-52 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08265 e5423f05e3865b75832901fd13a972b1 149 PANTHER PTHR11545 2 143 4.3E-61 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08265 e5423f05e3865b75832901fd13a972b1 149 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 27.628 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08265 e5423f05e3865b75832901fd13a972b1 149 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 140 6.3E-54 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08265 e5423f05e3865b75832901fd13a972b1 149 PIRSF PIRSF002181 1 149 3.3E-45 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08265 e5423f05e3865b75832901fd13a972b1 149 Pfam PF00572 Ribosomal protein L13 15 137 1.6E-50 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08265 e5423f05e3865b75832901fd13a972b1 149 Gene3D G3DSA:3.90.1180.10 3 140 6.5E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08480 7a45ce7d2bdd47067f642417cc5c8f05 235 SUPERFAMILY SSF53167 2 235 1.44E-49 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 HMPREF9228_RS08480 7a45ce7d2bdd47067f642417cc5c8f05 235 Pfam PF01048 Phosphorylase superfamily 4 232 3.4E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 HMPREF9228_RS08480 7a45ce7d2bdd47067f642417cc5c8f05 235 PANTHER PTHR21234 3 235 1.3E-31 T 22-04-2016 IPR018017 Nucleoside phosphorylase HMPREF9228_RS08480 7a45ce7d2bdd47067f642417cc5c8f05 235 Gene3D G3DSA:3.40.50.1580 3 234 1.5E-53 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 HMPREF9228_RS08480 7a45ce7d2bdd47067f642417cc5c8f05 235 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 4 235 1.1E-36 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 SUPERFAMILY SSF52402 6 144 1.34E-29 T 22-04-2016 HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 PANTHER PTHR31964:SF42 7 160 5.3E-20 T 22-04-2016 HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 PANTHER PTHR31964 7 160 5.3E-20 T 22-04-2016 HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 Gene3D G3DSA:3.40.50.620 5 144 2.7E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 SUPERFAMILY SSF52402 159 291 7.95E-26 T 22-04-2016 HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 PRINTS PR01438 Universal stress protein signature 266 288 1.0E-12 T 22-04-2016 IPR006015 Universal stress protein A HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 PRINTS PR01438 Universal stress protein signature 248 260 1.0E-12 T 22-04-2016 IPR006015 Universal stress protein A HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 PRINTS PR01438 Universal stress protein signature 4 22 1.0E-12 T 22-04-2016 IPR006015 Universal stress protein A HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 Gene3D G3DSA:3.40.50.620 156 288 6.9E-26 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 Pfam PF00582 Universal stress protein family 5 143 1.0E-18 T 22-04-2016 IPR006016 UspA GO:0006950 HMPREF9228_RS07815 393d6a250a44d12fe71ef7898ea19e35 345 Pfam PF00582 Universal stress protein family 159 288 4.5E-17 T 22-04-2016 IPR006016 UspA GO:0006950 HMPREF9228_RS02200 fc52455b4987000b23a1a6f02170df0b 333 Gene3D G3DSA:3.90.550.10 6 196 7.1E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS02200 fc52455b4987000b23a1a6f02170df0b 333 Pfam PF00535 Glycosyl transferase family 2 10 173 7.0E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS02200 fc52455b4987000b23a1a6f02170df0b 333 PANTHER PTHR22916:SF24 7 220 2.7E-32 T 22-04-2016 HMPREF9228_RS02200 fc52455b4987000b23a1a6f02170df0b 333 SUPERFAMILY SSF53448 8 224 3.33E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS02200 fc52455b4987000b23a1a6f02170df0b 333 PANTHER PTHR22916 7 220 2.7E-32 T 22-04-2016 HMPREF9228_RS07795 bf9edc999d5b4a9012d3ec5b2eed3f1e 172 SMART SM00226 7 167 9.5E-23 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily HMPREF9228_RS07795 bf9edc999d5b4a9012d3ec5b2eed3f1e 172 Gene3D G3DSA:3.40.50.270 5 171 6.9E-44 T 22-04-2016 HMPREF9228_RS07795 bf9edc999d5b4a9012d3ec5b2eed3f1e 172 SUPERFAMILY SSF52788 5 168 1.11E-38 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily HMPREF9228_RS07795 bf9edc999d5b4a9012d3ec5b2eed3f1e 172 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 160 4.3E-30 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily HMPREF9228_RS07795 bf9edc999d5b4a9012d3ec5b2eed3f1e 172 PANTHER PTHR11717 6 159 8.0E-28 T 22-04-2016 HMPREF9228_RS07795 bf9edc999d5b4a9012d3ec5b2eed3f1e 172 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 52 68 2.3E-10 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 HMPREF9228_RS07795 bf9edc999d5b4a9012d3ec5b2eed3f1e 172 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 112 125 2.3E-10 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 HMPREF9228_RS07795 bf9edc999d5b4a9012d3ec5b2eed3f1e 172 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 9 26 2.3E-10 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 61 97 9.0E-13 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 Gene3D G3DSA:1.20.5.710 4 53 1.4E-19 T 22-04-2016 HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 126 8.3E-29 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 Gene3D G3DSA:3.30.1390.10 54 126 2.6E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 SUPERFAMILY SSF54736 55 126 1.4E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 2.5E-45 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 126 23.515 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 SUPERFAMILY SSF48300 5 62 2.62E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08425 5a4634bc82e3672392fd688f4e2c18c3 126 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 53 5.6E-17 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS03355 6d4ac31728979e06e9301cf797ca7aab 199 Gene3D G3DSA:1.10.10.10 100 144 2.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03355 6d4ac31728979e06e9301cf797ca7aab 199 Gene3D G3DSA:1.10.10.10 55 96 9.2E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03355 6d4ac31728979e06e9301cf797ca7aab 199 PANTHER PTHR33602 51 197 8.2E-14 T 22-04-2016 HMPREF9228_RS03355 6d4ac31728979e06e9301cf797ca7aab 199 Pfam PF02631 RecX family 76 195 3.3E-19 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 HMPREF9228_RS06450 edf5cabda6321c32ad300242e82db137 270 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS06450 edf5cabda6321c32ad300242e82db137 270 Gene3D G3DSA:3.40.50.300 5 228 3.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06450 edf5cabda6321c32ad300242e82db137 270 SMART SM00382 34 222 2.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06450 edf5cabda6321c32ad300242e82db137 270 PANTHER PTHR24220 7 227 8.5E-100 T 22-04-2016 HMPREF9228_RS06450 edf5cabda6321c32ad300242e82db137 270 SUPERFAMILY SSF52540 5 228 1.73E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06450 edf5cabda6321c32ad300242e82db137 270 Pfam PF00005 ABC transporter 25 173 2.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS06450 edf5cabda6321c32ad300242e82db137 270 PANTHER PTHR24220:SF578 7 227 8.5E-100 T 22-04-2016 HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 Pfam PF00398 Ribosomal RNA adenine dimethylase 30 288 5.8E-43 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 Gene3D G3DSA:3.40.50.150 14 220 3.4E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 SMART SM00650 42 221 3.8E-70 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 26 295 49.86 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 PANTHER PTHR11727 10 293 2.6E-79 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 Gene3D G3DSA:1.10.8.100 235 295 9.7E-25 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 SUPERFAMILY SSF53335 25 294 5.03E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 27 292 1.2E-71 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 HMPREF9228_RS09700 072d89e87ea60d16d14a0cb3ef177911 309 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 58 85 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 27 157 6.0E-73 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 56 74 6.2E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 80 98 6.2E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 12 30 6.2E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 124 143 6.2E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 35 53 6.2E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 PIRSF PIRSF006160 8 164 1.1E-63 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 8 162 35.616 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 11 155 2.7E-53 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 SUPERFAMILY SSF63411 11 163 6.59E-62 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 PANTHER PTHR35799 9 161 5.1E-76 T 22-04-2016 HMPREF9228_RS06555 3afd4ed4004407941655a45fae518497 164 Gene3D G3DSA:3.30.1360.80 10 163 2.6E-65 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 Gene3D G3DSA:3.40.50.270 405 489 4.4E-10 T 22-04-2016 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 SUPERFAMILY SSF63520 293 398 9.16E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 405 465 6.4E-5 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 SUPERFAMILY SSF63520 183 284 6.41E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 Pfam PF05043 Mga helix-turn-helix domain 97 162 2.3E-6 T 22-04-2016 IPR007737 Mga helix-turn-helix domain HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 Pfam PF08279 HTH domain 8 62 2.6E-8 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 Gene3D G3DSA:1.10.1790.10 181 283 3.8E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 Gene3D G3DSA:1.10.1790.10 294 398 3.8E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 PANTHER PTHR30185:SF5 1 485 5.6E-83 T 22-04-2016 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 Gene3D G3DSA:1.10.10.10 7 65 1.6E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 SUPERFAMILY SSF52794 404 486 1.26E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 PANTHER PTHR30185 1 485 5.6E-83 T 22-04-2016 HMPREF9228_RS02325 474a1bee2650f7aa9a9161fc5a2babb9 497 Pfam PF00874 PRD domain 306 394 9.1E-14 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS00195 7bc50211976e669502f83425ae39d3fc 442 PANTHER PTHR30061:SF7 6 442 2.1E-105 T 22-04-2016 HMPREF9228_RS00195 7bc50211976e669502f83425ae39d3fc 442 SUPERFAMILY SSF53850 42 434 1.61E-85 T 22-04-2016 HMPREF9228_RS00195 7bc50211976e669502f83425ae39d3fc 442 Gene3D G3DSA:3.40.190.10 163 369 7.0E-54 T 22-04-2016 HMPREF9228_RS00195 7bc50211976e669502f83425ae39d3fc 442 Pfam PF13416 Bacterial extracellular solute-binding protein 62 376 6.9E-52 T 22-04-2016 HMPREF9228_RS00195 7bc50211976e669502f83425ae39d3fc 442 PANTHER PTHR30061 6 442 2.1E-105 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 Hamap MF_01465 Protein translocase subunit SecY [secY]. 4 436 27.535 T 22-04-2016 IPR026593 Protein translocase subunit SecY HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 SUPERFAMILY SSF103491 3 426 4.05E-114 T 22-04-2016 IPR023201 SecY subunit domain HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 405 423 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 17 35 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 9.5E-90 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PANTHER PTHR10906 1 436 2.6E-170 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PIRSF PIRSF004557 1 443 1.6E-111 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 PANTHER PTHR10906:SF2 1 436 2.6E-170 T 22-04-2016 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 Pfam PF00344 SecY translocase 74 419 6.1E-105 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 Gene3D G3DSA:1.10.3370.10 3 436 6.6E-144 T 22-04-2016 IPR023201 SecY subunit domain HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 22-04-2016 IPR030659 SecY conserved site HMPREF9228_RS08095 6f010709ff56917e9a55a1fad422d62a 445 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 14 429 2.3E-121 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 HMPREF9228_RS08525 5b83d736527683d4064b6a19855334c2 314 PANTHER PTHR30193 10 297 1.8E-97 T 22-04-2016 HMPREF9228_RS08525 5b83d736527683d4064b6a19855334c2 314 PANTHER PTHR30193:SF1 10 297 1.8E-97 T 22-04-2016 HMPREF9228_RS08525 5b83d736527683d4064b6a19855334c2 314 Gene3D G3DSA:1.20.58.370 7 42 9.0E-4 T 22-04-2016 HMPREF9228_RS08525 5b83d736527683d4064b6a19855334c2 314 SUPERFAMILY SSF160964 6 52 2.75E-6 T 22-04-2016 HMPREF9228_RS08525 5b83d736527683d4064b6a19855334c2 314 SUPERFAMILY SSF161098 54 280 3.01E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08525 5b83d736527683d4064b6a19855334c2 314 Gene3D G3DSA:1.10.3720.10 63 286 7.3E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08525 5b83d736527683d4064b6a19855334c2 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 285 1.7E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 PANTHER PTHR34471:SF1 9 157 3.4E-37 T 22-04-2016 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 Pfam PF02863 Arginine repressor, C-terminal domain 101 159 5.0E-22 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 Gene3D G3DSA:1.10.10.10 20 75 7.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 SUPERFAMILY SSF55252 99 165 6.02E-18 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 SUPERFAMILY SSF46785 12 78 3.99E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 Gene3D G3DSA:3.30.1360.40 92 165 3.7E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 PANTHER PTHR34471 9 157 3.4E-37 T 22-04-2016 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 TIGRFAM TIGR01529 argR_whole: arginine repressor 17 157 8.5E-39 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 109 146 3.0E-13 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 Pfam PF01316 Arginine repressor, DNA binding domain 13 76 1.2E-19 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 Hamap MF_00173 Arginine repressor [argR]. 1 170 48.757 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 PRINTS PR01467 Bacterial arginine repressor signature 137 152 3.0E-21 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 PRINTS PR01467 Bacterial arginine repressor signature 107 120 3.0E-21 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 PRINTS PR01467 Bacterial arginine repressor signature 32 45 3.0E-21 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 HMPREF9228_RS05695 a7419d2cff30e87911ccfb568f3a5e02 170 PRINTS PR01467 Bacterial arginine repressor signature 48 63 3.0E-21 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 PANTHER PTHR10173 11 157 4.0E-75 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 PANTHER PTHR10173 281 325 4.0E-75 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 PANTHER PTHR10173:SF31 11 157 4.0E-75 T 22-04-2016 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 PANTHER PTHR10173:SF31 281 325 4.0E-75 T 22-04-2016 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 SUPERFAMILY SSF55068 7 167 5.89E-61 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 Gene3D G3DSA:2.170.150.20 183 317 6.7E-52 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 184 311 2.0E-51 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 SUPERFAMILY SSF51316 182 316 3.77E-49 T 22-04-2016 IPR011057 Mss4-like HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 14 163 1.6E-49 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 12 169 34.022 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 Pfam PF01641 SelR domain 185 302 3.2E-41 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 Gene3D G3DSA:3.30.1060.10 5 164 3.5E-61 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 HMPREF9228_RS00380 ef35d3bd2f44a9f7110427e5939b5792 338 Pfam PF01625 Peptide methionine sulfoxide reductase 15 164 5.0E-55 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 Gene3D G3DSA:3.20.20.70 137 373 2.8E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 46 388 1.2E-92 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 PIRSF PIRSF006004 32 389 2.9E-116 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 PANTHER PTHR30544 49 389 1.2E-144 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 SUPERFAMILY SSF102114 131 363 1.96E-17 T 22-04-2016 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 SMART SM00729 137 362 0.0025 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 Pfam PF04055 Radical SAM superfamily 142 315 1.5E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 37 389 66.298 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS03750 45287fac12c7e4d01b6e4ed088212ad1 389 PANTHER PTHR30544:SF5 49 389 1.2E-144 T 22-04-2016 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 Pfam PF01702 Queuine tRNA-ribosyltransferase 186 422 6.6E-73 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 PANTHER PTHR21148:SF26 157 424 3.7E-114 T 22-04-2016 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 PANTHER PTHR21148:SF26 46 131 3.7E-114 T 22-04-2016 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 SUPERFAMILY SSF51713 44 424 2.75E-124 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 46 425 2.2E-123 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 Gene3D G3DSA:3.20.20.105 44 427 2.1E-136 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 PANTHER PTHR21148 157 424 3.7E-114 T 22-04-2016 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 PANTHER PTHR21148 46 131 3.7E-114 T 22-04-2016 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 45 425 3.4E-121 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 HMPREF9228_RS00425 a640d6e796a7cef96e53db06f754071d 437 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 23 421 44.655 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 SUPERFAMILY SSF52335 8 198 2.01E-59 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 Gene3D G3DSA:3.40.140.20 264 382 7.4E-44 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 SMART SM00851 20 134 3.1E-45 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 Pfam PF01808 AICARFT/IMPCHase bienzyme 139 473 7.1E-113 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 545 41.922 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 545 9.0E-165 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 PANTHER PTHR11692:SF2 223 545 7.6E-255 T 22-04-2016 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 PANTHER PTHR11692:SF2 6 198 7.6E-255 T 22-04-2016 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 Gene3D G3DSA:3.40.50.1380 6 191 3.0E-73 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 PIRSF PIRSF000414 2 545 1.3E-201 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 SUPERFAMILY SSF53927 234 545 1.1E-114 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 SMART SM00798 139 474 2.3E-179 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 PANTHER PTHR11692 223 545 7.6E-255 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 PANTHER PTHR11692 6 198 7.6E-255 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 Gene3D G3DSA:3.40.140.20 388 535 2.6E-53 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 HMPREF9228_RS04025 265c295434b680799f3a8f27eb6f1a06 545 Pfam PF02142 MGS-like domain 21 133 3.9E-21 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 568 629 6.0E-12 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 SMART SM00382 378 568 4.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 SUPERFAMILY SSF161098 82 276 2.22E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 Pfam PF00005 ABC transporter 370 518 2.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 SUPERFAMILY SSF52540 343 595 8.65E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 PANTHER PTHR24220:SF535 352 629 2.4E-121 T 22-04-2016 HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 570 626 6.7E-10 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 282 1.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 PANTHER PTHR24220 352 629 2.4E-121 T 22-04-2016 HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 Gene3D G3DSA:3.40.50.300 349 592 2.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00850 04a7f2988aead33471d5947ed21151a6 676 Gene3D G3DSA:1.10.3720.10 78 282 4.6E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06155 63989aa680fa8af41f98b95291d8f6ef 178 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 32 151 16.417 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 HMPREF9228_RS06155 63989aa680fa8af41f98b95291d8f6ef 178 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 34 146 1.9E-16 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 HMPREF9228_RS06155 63989aa680fa8af41f98b95291d8f6ef 178 PANTHER PTHR28259 25 161 2.2E-18 T 22-04-2016 HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 PANTHER PTHR23105:SF5 20 229 2.3E-80 T 22-04-2016 HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 PIRSF PIRSF002155 1 227 6.2E-74 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 PANTHER PTHR23105 20 229 2.3E-80 T 22-04-2016 HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 Gene3D G3DSA:3.40.50.790 69 159 2.9E-42 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.8E-100 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 Gene3D G3DSA:3.30.190.20 161 227 3.0E-40 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 Gene3D G3DSA:3.30.190.20 16 68 3.0E-40 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 SUPERFAMILY SSF56808 6 227 1.96E-81 T 22-04-2016 IPR023674 Ribosomal protein L1-like HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 Pfam PF00687 Ribosomal protein L1p/L10e family 32 218 2.2E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein HMPREF9228_RS08700 ff347e1cd804e212b0d014ce03818e19 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.167 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS00170 e38d399ea3488143f1cda235ee964596 230 PANTHER PTHR33295:SF7 1 171 1.9E-57 T 22-04-2016 HMPREF9228_RS00170 e38d399ea3488143f1cda235ee964596 230 Gene3D G3DSA:3.40.50.300 7 124 9.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00170 e38d399ea3488143f1cda235ee964596 230 SUPERFAMILY SSF52540 6 157 1.48E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00170 e38d399ea3488143f1cda235ee964596 230 Pfam PF13173 AAA domain 17 151 3.1E-26 T 22-04-2016 HMPREF9228_RS00170 e38d399ea3488143f1cda235ee964596 230 PANTHER PTHR33295 1 171 1.9E-57 T 22-04-2016 HMPREF9228_RS09050 2eec46eb310e3fc89107a604a9ea2c68 348 PANTHER PTHR22916:SF24 175 242 2.8E-55 T 22-04-2016 HMPREF9228_RS09050 2eec46eb310e3fc89107a604a9ea2c68 348 PANTHER PTHR22916 175 242 2.8E-55 T 22-04-2016 HMPREF9228_RS09050 2eec46eb310e3fc89107a604a9ea2c68 348 Gene3D G3DSA:3.90.550.10 4 222 1.5E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09050 2eec46eb310e3fc89107a604a9ea2c68 348 PANTHER PTHR22916 3 144 2.8E-55 T 22-04-2016 HMPREF9228_RS09050 2eec46eb310e3fc89107a604a9ea2c68 348 SUPERFAMILY SSF53448 181 250 1.27E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09050 2eec46eb310e3fc89107a604a9ea2c68 348 SUPERFAMILY SSF53448 6 139 1.27E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09050 2eec46eb310e3fc89107a604a9ea2c68 348 PANTHER PTHR22916:SF24 3 144 2.8E-55 T 22-04-2016 HMPREF9228_RS09050 2eec46eb310e3fc89107a604a9ea2c68 348 Pfam PF00535 Glycosyl transferase family 2 9 128 2.2E-35 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 PIRSF PIRSF039102 1 395 4.2E-100 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 Gene3D G3DSA:3.30.470.20 157 180 3.0E-46 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 Gene3D G3DSA:3.30.470.20 262 392 3.0E-46 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 394 38.777 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 134 145 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 Gene3D G3DSA:3.40.50.20 118 156 5.9E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 Gene3D G3DSA:3.40.50.20 1 82 5.9E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 Gene3D G3DSA:3.30.1490.20 181 260 1.0E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 Pfam PF01820 D-ala D-ala ligase N-terminus 5 157 8.7E-32 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 SUPERFAMILY SSF52440 3 71 4.7E-32 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 SUPERFAMILY SSF52440 107 166 4.7E-32 T 22-04-2016 IPR016185 Pre-ATP-grasp domain HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 336 364 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 392 1.0E-91 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 Pfam PF07478 D-ala D-ala ligase C-terminus 175 391 3.9E-61 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 SUPERFAMILY SSF56059 167 394 3.01E-52 T 22-04-2016 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 PANTHER PTHR23132:SF8 103 391 3.7E-131 T 22-04-2016 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 PANTHER PTHR23132:SF8 1 70 3.7E-131 T 22-04-2016 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 PANTHER PTHR23132 103 391 3.7E-131 T 22-04-2016 HMPREF9228_RS01650 19a667533bdb797a7aa3e2c3cf5a0d32 395 PANTHER PTHR23132 1 70 3.7E-131 T 22-04-2016 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 Hamap MF_00082_B Acetylglutamate kinase [argB]. 38 306 33.638 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 PRINTS PR00474 Glutamate 5-kinase family signature 205 232 1.7E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 PRINTS PR00474 Glutamate 5-kinase family signature 71 85 1.7E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 PRINTS PR00474 Glutamate 5-kinase family signature 256 276 1.7E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 PIRSF PIRSF000728 25 306 1.1E-99 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 PANTHER PTHR23342 18 317 4.0E-104 T 22-04-2016 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 Gene3D G3DSA:3.40.1160.10 39 305 5.0E-97 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 TIGRFAM TIGR00761 argB: acetylglutamate kinase 42 281 1.9E-74 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 SUPERFAMILY SSF53633 21 307 3.93E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS05710 91baf5d3f5d9bb88ff0cc31b10592a32 318 Pfam PF00696 Amino acid kinase family 40 283 7.0E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 476 1.7E-148 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 PANTHER PTHR11817 1 476 5.4E-188 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 Gene3D G3DSA:3.40.1380.20 328 476 1.4E-36 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 PRINTS PR01050 Pyruvate kinase family signature 246 270 1.1E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.1E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 PRINTS PR01050 Pyruvate kinase family signature 315 331 1.1E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 PRINTS PR01050 Pyruvate kinase family signature 219 245 1.1E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 PRINTS PR01050 Pyruvate kinase family signature 271 295 1.1E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 PRINTS PR01050 Pyruvate kinase family signature 189 203 1.1E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 PRINTS PR01050 Pyruvate kinase family signature 296 314 1.1E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 SUPERFAMILY SSF50800 70 170 7.33E-26 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 SUPERFAMILY SSF52935 348 477 1.96E-31 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 Gene3D G3DSA:2.40.33.10 73 171 2.0E-29 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 474 2.3E-24 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 SUPERFAMILY SSF51621 159 340 3.14E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 SUPERFAMILY SSF51621 1 74 3.14E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 217 229 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 Pfam PF00224 Pyruvate kinase, barrel domain 1 337 1.4E-114 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 Gene3D G3DSA:3.20.20.60 172 327 3.3E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 HMPREF9228_RS05320 637a8ea62a96971fc488ae802d5ae04a 480 Gene3D G3DSA:3.20.20.60 2 72 3.3E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 HMPREF9228_RS03920 7f5e80b1f16386a27349d32c6367a6fb 87 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 12 86 5.6E-8 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 HMPREF9228_RS03920 7f5e80b1f16386a27349d32c6367a6fb 87 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 18.501 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 HMPREF9228_RS03920 7f5e80b1f16386a27349d32c6367a6fb 87 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 87 3.9E-23 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 HMPREF9228_RS03920 7f5e80b1f16386a27349d32c6367a6fb 87 SUPERFAMILY SSF101386 1 87 8.78E-22 T 22-04-2016 HMPREF9228_RS03920 7f5e80b1f16386a27349d32c6367a6fb 87 PANTHER PTHR21256 1 87 7.7E-23 T 22-04-2016 HMPREF9228_RS09640 b58980fb1de051f93c111fcec12d6aa3 166 Pfam PF07972 NrdI Flavodoxin like 32 155 5.7E-45 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI HMPREF9228_RS09640 b58980fb1de051f93c111fcec12d6aa3 166 PANTHER PTHR37297 29 165 6.7E-40 T 22-04-2016 HMPREF9228_RS09640 b58980fb1de051f93c111fcec12d6aa3 166 Hamap MF_00128 Protein NrdI [nrdI]. 30 165 31.055 T 22-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial HMPREF9228_RS09640 b58980fb1de051f93c111fcec12d6aa3 166 PANTHER PTHR37297:SF1 29 165 6.7E-40 T 22-04-2016 HMPREF9228_RS09640 b58980fb1de051f93c111fcec12d6aa3 166 SUPERFAMILY SSF52218 29 163 3.07E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain HMPREF9228_RS09640 b58980fb1de051f93c111fcec12d6aa3 166 PIRSF PIRSF005087 29 166 8.8E-50 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI HMPREF9228_RS09640 b58980fb1de051f93c111fcec12d6aa3 166 TIGRFAM TIGR00333 nrdI: nrdI protein 32 163 3.5E-40 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI HMPREF9228_RS09640 b58980fb1de051f93c111fcec12d6aa3 166 Gene3D G3DSA:3.40.50.360 31 165 2.9E-51 T 22-04-2016 IPR029039 Flavoprotein-like domain HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 SUPERFAMILY SSF52540 317 599 1.91E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 389 592 8.8E-19 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 Pfam PF07498 Rho termination factor, N-terminal domain 7 39 1.0E-8 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 Pfam PF07497 Rho termination factor, RNA-binding domain 280 357 5.5E-26 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 Gene3D G3DSA:2.40.50.140 275 357 1.6E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 Gene3D G3DSA:2.40.50.140 3 46 1.6E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 PANTHER PTHR15184:SF34 205 647 2.0E-158 T 22-04-2016 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 TIGRFAM TIGR00767 rho: transcription termination factor Rho 4 645 1.1E-182 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 SMART SM00357 281 344 1.9E-6 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 SMART SM00382 399 584 6.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 SUPERFAMILY SSF50249 280 356 5.48E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 Gene3D G3DSA:3.40.50.300 363 645 4.0E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 SUPERFAMILY SSF68912 4 41 3.57E-5 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 SMART SM00959 6 46 1.9E-10 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 Hamap MF_01884 Transcription termination factor Rho [rho]. 274 649 187.575 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 HMPREF9228_RS01440 7cb20a26e31d3b93e8706f8297e8421a 658 PANTHER PTHR15184 205 647 2.0E-158 T 22-04-2016 HMPREF9228_RS08280 8280fea86a1b290e0d5e0540606caad1 213 SUPERFAMILY SSF54211 7 132 1.78E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS08280 8280fea86a1b290e0d5e0540606caad1 213 Pfam PF01205 Uncharacterized protein family UPF0029 19 125 9.4E-27 T 22-04-2016 IPR001498 Impact, N-terminal HMPREF9228_RS08280 8280fea86a1b290e0d5e0540606caad1 213 Pfam PF09186 Domain of unknown function (DUF1949) 142 196 2.4E-12 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal HMPREF9228_RS08280 8280fea86a1b290e0d5e0540606caad1 213 Gene3D G3DSA:3.30.230.30 7 132 1.4E-41 T 22-04-2016 IPR001498 Impact, N-terminal HMPREF9228_RS08280 8280fea86a1b290e0d5e0540606caad1 213 PANTHER PTHR16301 14 207 2.0E-49 T 22-04-2016 IPR023582 Impact family HMPREF9228_RS08280 8280fea86a1b290e0d5e0540606caad1 213 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 12 193 7.2E-51 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal HMPREF9228_RS08280 8280fea86a1b290e0d5e0540606caad1 213 Gene3D G3DSA:3.30.70.240 138 208 9.6E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain HMPREF9228_RS08280 8280fea86a1b290e0d5e0540606caad1 213 SUPERFAMILY SSF54980 138 204 6.19E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain HMPREF9228_RS05510 fe9181e702faaee1afa7fc3ddb3bf8da 165 PANTHER PTHR23091 1 165 2.6E-22 T 22-04-2016 HMPREF9228_RS05510 fe9181e702faaee1afa7fc3ddb3bf8da 165 PANTHER PTHR23091:SF187 1 165 2.6E-22 T 22-04-2016 HMPREF9228_RS05510 fe9181e702faaee1afa7fc3ddb3bf8da 165 Pfam PF13302 Acetyltransferase (GNAT) domain 4 139 1.7E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS05510 fe9181e702faaee1afa7fc3ddb3bf8da 165 SUPERFAMILY SSF55729 3 164 1.27E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS05510 fe9181e702faaee1afa7fc3ddb3bf8da 165 Gene3D G3DSA:3.40.630.30 1 165 3.9E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS01145 48598ba06383c3b10215cf63e5c1412f 183 SMART SM00900 102 180 7.3E-5 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 HMPREF9228_RS01145 48598ba06383c3b10215cf63e5c1412f 183 Pfam PF04205 FMN-binding domain 105 176 3.5E-6 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 HMPREF9228_RS00325 e435b2cda6f6bb8a5f3e2a58faa367ef 535 Pfam PF01098 Cell cycle protein 66 429 3.4E-72 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 HMPREF9228_RS00325 e435b2cda6f6bb8a5f3e2a58faa367ef 535 PANTHER PTHR30474:SF3 38 446 1.7E-135 T 22-04-2016 HMPREF9228_RS00325 e435b2cda6f6bb8a5f3e2a58faa367ef 535 PANTHER PTHR30474 38 446 1.7E-135 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 HMPREF9228_RS00370 2b8d0835943243a619636646621cc50e 460 Pfam PF00756 Putative esterase 204 434 1.4E-8 T 22-04-2016 IPR000801 Putative esterase HMPREF9228_RS00370 2b8d0835943243a619636646621cc50e 460 Gene3D G3DSA:3.40.50.1820 173 441 4.8E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00370 2b8d0835943243a619636646621cc50e 460 SUPERFAMILY SSF53474 182 439 8.9E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 1.0E-7 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.0E-7 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 109 3.1E-22 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 PANTHER PTHR11717 125 190 4.3E-21 T 22-04-2016 HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 PANTHER PTHR11717 1 94 4.3E-21 T 22-04-2016 HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 Gene3D G3DSA:3.40.50.270 144 181 2.9E-38 T 22-04-2016 HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 Gene3D G3DSA:3.40.50.270 1 110 2.9E-38 T 22-04-2016 HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 PANTHER PTHR11717:SF14 125 190 4.3E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 PANTHER PTHR11717:SF14 1 94 4.3E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 SMART SM00226 1 177 1.7E-21 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 SUPERFAMILY SSF52788 148 176 1.31E-31 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily HMPREF9228_RS02150 6926e433f711802f13b89c81876422a4 201 SUPERFAMILY SSF52788 1 116 1.31E-31 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 Gene3D G3DSA:1.10.10.10 401 471 1.9E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 Pfam PF04539 Sigma-70 region 3 317 393 3.3E-28 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 PANTHER PTHR30603 62 471 1.9E-198 T 22-04-2016 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 431 457 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 Pfam PF04545 Sigma-70, region 4 406 459 1.0E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 234 470 1.3E-112 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 234 459 2.3E-36 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 Pfam PF00140 Sigma-70 factor, region 1.2 172 205 8.1E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 PANTHER PTHR30603:SF0 62 471 1.9E-198 T 22-04-2016 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 SUPERFAMILY SSF88659 311 384 5.23E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 SUPERFAMILY SSF88659 369 470 2.24E-27 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 PRINTS PR00046 Major sigma-70 factor signature 410 422 1.3E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 PRINTS PR00046 Major sigma-70 factor signature 431 446 1.3E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 PRINTS PR00046 Major sigma-70 factor signature 262 275 1.3E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 PRINTS PR00046 Major sigma-70 factor signature 286 294 1.3E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 PRINTS PR00046 Major sigma-70 factor signature 446 457 1.3E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 33 471 31.417 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 262 275 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 Pfam PF04542 Sigma-70 region 2 238 307 4.6E-22 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 Gene3D G3DSA:1.10.10.10 311 362 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 Gene3D G3DSA:1.10.601.10 61 307 8.3E-62 T 22-04-2016 HMPREF9228_RS03400 de9ed6c6dbdf2503e66ae59b08ba60e5 472 SUPERFAMILY SSF88946 169 308 3.03E-51 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS02735 dda6f0d236543b17329400699dddff17 184 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.1E-8 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 HMPREF9228_RS02735 dda6f0d236543b17329400699dddff17 184 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 57 65 1.1E-8 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 HMPREF9228_RS02735 dda6f0d236543b17329400699dddff17 184 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 99 114 1.1E-8 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 HMPREF9228_RS02735 dda6f0d236543b17329400699dddff17 184 Pfam PF01252 Signal peptidase (SPase) II 20 155 2.2E-26 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 HMPREF9228_RS02735 dda6f0d236543b17329400699dddff17 184 PANTHER PTHR33695:SF1 9 169 1.0E-37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 HMPREF9228_RS02735 dda6f0d236543b17329400699dddff17 184 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 161 14.412 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 HMPREF9228_RS02735 dda6f0d236543b17329400699dddff17 184 TIGRFAM TIGR00077 lspA: signal peptidase II 14 156 1.3E-22 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 HMPREF9228_RS02735 dda6f0d236543b17329400699dddff17 184 PANTHER PTHR33695 9 169 1.0E-37 T 22-04-2016 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 30 469 4.8E-142 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 SUPERFAMILY SSF102114 163 397 1.7E-56 T 22-04-2016 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 30 468 1.3E-138 T 22-04-2016 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 PANTHER PTHR11918:SF43 1 471 2.4E-157 T 22-04-2016 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 179 199 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 PANTHER PTHR11918 1 471 2.4E-157 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 Pfam PF04055 Radical SAM superfamily 181 350 2.3E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 28 473 66.111 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 Pfam PF00919 Uncharacterized protein family UPF0004 30 132 3.2E-25 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 Gene3D G3DSA:3.80.30.20 175 403 2.9E-80 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe HMPREF9228_RS03310 5decbfd26e9305ba3e08a953291d6393 483 SMART SM00729 175 392 7.2E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 HMPREF9228_RS01680 b2cc15ac94817efb6500424c80312d01 263 Pfam PF00924 Mechanosensitive ion channel 57 234 4.3E-30 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 HMPREF9228_RS01680 b2cc15ac94817efb6500424c80312d01 263 SUPERFAMILY SSF50182 100 164 2.42E-14 T 22-04-2016 IPR010920 LSM domain HMPREF9228_RS01680 b2cc15ac94817efb6500424c80312d01 263 PANTHER PTHR30566:SF5 22 157 1.7E-27 T 22-04-2016 HMPREF9228_RS01680 b2cc15ac94817efb6500424c80312d01 263 PANTHER PTHR30566 22 157 1.7E-27 T 22-04-2016 HMPREF9228_RS01680 b2cc15ac94817efb6500424c80312d01 263 Gene3D G3DSA:2.30.30.60 117 161 8.1E-15 T 22-04-2016 HMPREF9228_RS01680 b2cc15ac94817efb6500424c80312d01 263 SUPERFAMILY SSF82861 19 99 4.05E-10 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 HMPREF9228_RS08575 a4ac45fc874ae06b707cd64634038b8b 516 SUPERFAMILY SSF51366 21 147 8.47E-5 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS08575 a4ac45fc874ae06b707cd64634038b8b 516 Pfam PF16325 Peptidase family U32 C-terminal domain 420 505 5.4E-13 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS08575 a4ac45fc874ae06b707cd64634038b8b 516 PANTHER PTHR30217 2 280 1.3E-137 T 22-04-2016 HMPREF9228_RS08575 a4ac45fc874ae06b707cd64634038b8b 516 PANTHER PTHR30217:SF6 2 280 1.3E-137 T 22-04-2016 HMPREF9228_RS08575 a4ac45fc874ae06b707cd64634038b8b 516 Pfam PF01136 Peptidase family U32 81 283 9.8E-86 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS09010 f7bfe74ee2508c8629e89dff56353ecd 192 PANTHER PTHR10937 45 138 2.1E-23 T 22-04-2016 HMPREF9228_RS09010 f7bfe74ee2508c8629e89dff56353ecd 192 Gene3D G3DSA:3.40.50.10490 18 190 1.7E-39 T 22-04-2016 HMPREF9228_RS09010 f7bfe74ee2508c8629e89dff56353ecd 192 Pfam PF01380 SIS domain 40 139 3.2E-11 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 HMPREF9228_RS09010 f7bfe74ee2508c8629e89dff56353ecd 192 SUPERFAMILY SSF53697 18 190 1.29E-36 T 22-04-2016 HMPREF9228_RS09010 f7bfe74ee2508c8629e89dff56353ecd 192 PANTHER PTHR10937:SF13 45 138 2.1E-23 T 22-04-2016 HMPREF9228_RS03590 d10b53775fcfcc0d09941eaaeb869399 152 SMART SM00278 129 148 11.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 HMPREF9228_RS03590 d10b53775fcfcc0d09941eaaeb869399 152 SMART SM00278 99 118 0.081 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 HMPREF9228_RS03590 d10b53775fcfcc0d09941eaaeb869399 152 Pfam PF12836 Helix-hairpin-helix motif 89 150 8.7E-24 T 22-04-2016 HMPREF9228_RS03590 d10b53775fcfcc0d09941eaaeb869399 152 SUPERFAMILY SSF47781 79 151 5.23E-27 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 HMPREF9228_RS03590 d10b53775fcfcc0d09941eaaeb869399 152 PANTHER PTHR21180 83 151 4.6E-22 T 22-04-2016 HMPREF9228_RS03590 d10b53775fcfcc0d09941eaaeb869399 152 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 89 151 4.5E-19 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain HMPREF9228_RS03590 d10b53775fcfcc0d09941eaaeb869399 152 Gene3D G3DSA:1.10.150.320 81 151 7.3E-20 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 Gene3D G3DSA:1.20.1250.20 348 504 1.9E-15 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 Gene3D G3DSA:1.20.1250.20 569 593 1.9E-15 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 PANTHER PTHR23501 308 515 3.2E-103 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 PANTHER PTHR23501 542 593 3.2E-103 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 PANTHER PTHR23501 5 290 3.2E-103 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 PRINTS PR01036 Tetracycline resistance protein TetB signature 63 87 2.4E-6 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 PRINTS PR01036 Tetracycline resistance protein TetB signature 154 174 2.4E-6 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 PRINTS PR01036 Tetracycline resistance protein TetB signature 184 208 2.4E-6 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 Gene3D G3DSA:1.20.1250.20 58 237 2.8E-30 T 22-04-2016 HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 SUPERFAMILY SSF103473 331 503 2.22E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 SUPERFAMILY SSF103473 46 261 2.22E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 SUPERFAMILY SSF103473 568 593 2.22E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS07450 81922c76aa41da856c9ae458f8c88ca7 601 Pfam PF07690 Major Facilitator Superfamily 65 493 4.6E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 179 199 2.8E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 443 462 2.8E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 211 225 2.8E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 248 262 2.8E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 282 309 2.8E-46 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PANTHER PTHR30050:SF2 144 486 1.2E-169 T 22-04-2016 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PANTHER PTHR30050:SF2 11 113 1.2E-169 T 22-04-2016 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 Gene3D G3DSA:1.10.1750.10 389 485 4.3E-37 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 Gene3D G3DSA:1.10.8.60 317 386 3.8E-26 T 22-04-2016 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 395 462 1.8E-30 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 Pfam PF00308 Bacterial dnaA protein 146 367 9.1E-86 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 Gene3D G3DSA:3.40.50.300 137 315 4.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 SMART SM00382 178 359 1.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PANTHER PTHR30050 144 486 1.2E-169 T 22-04-2016 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 PANTHER PTHR30050 11 113 1.2E-169 T 22-04-2016 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 SUPERFAMILY SSF52540 146 362 5.34E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 16 481 7.5E-147 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 SUPERFAMILY SSF48295 388 485 6.28E-34 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 13 484 30.066 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 ProSitePatterns PS01008 DnaA protein signature. 443 462 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 HMPREF9228_RS00005 975146f3f2f9e485535fbf9e9731ce44 488 SMART SM00760 393 462 7.1E-40 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 HMPREF9228_RS06215 f2ee00a6e08257143abd0b54325ee156 341 Gene3D G3DSA:3.90.1150.10 255 341 3.8E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS06215 f2ee00a6e08257143abd0b54325ee156 341 Gene3D G3DSA:3.40.640.10 1 253 1.8E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS06215 f2ee00a6e08257143abd0b54325ee156 341 Pfam PF01212 Beta-eliminating lyase 14 295 2.0E-30 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 HMPREF9228_RS06215 f2ee00a6e08257143abd0b54325ee156 341 PANTHER PTHR10289:SF8 1 341 4.3E-122 T 22-04-2016 HMPREF9228_RS06215 f2ee00a6e08257143abd0b54325ee156 341 PANTHER PTHR10289 1 341 4.3E-122 T 22-04-2016 HMPREF9228_RS06215 f2ee00a6e08257143abd0b54325ee156 341 SUPERFAMILY SSF53383 1 341 1.16E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 SMART SM00642 24 453 8.0E-60 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357:SF11 4 138 9.1E-82 T 22-04-2016 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357:SF11 201 231 9.1E-82 T 22-04-2016 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357:SF11 575 611 9.1E-82 T 22-04-2016 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357:SF11 248 359 9.1E-82 T 22-04-2016 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357:SF11 494 543 9.1E-82 T 22-04-2016 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357:SF11 390 458 9.1E-82 T 22-04-2016 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 SUPERFAMILY SSF51445 12 120 1.23E-87 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 SUPERFAMILY SSF51445 209 515 1.23E-87 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 Pfam PF00128 Alpha amylase, catalytic domain 39 436 4.5E-54 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 Gene3D G3DSA:3.20.20.80 491 516 6.3E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 Gene3D G3DSA:3.20.20.80 10 125 6.3E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 Gene3D G3DSA:3.20.20.80 185 459 6.3E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357 4 138 9.1E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357 201 231 9.1E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357 575 611 9.1E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357 248 359 9.1E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357 494 543 9.1E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00560 6cf105ea8b4b7dbb702d442a9a45a4a0 628 PANTHER PTHR10357 390 458 9.1E-82 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS05290 6f4306633ceb3d3918e07530cc7e53e3 224 PANTHER PTHR11839 32 208 6.5E-20 T 22-04-2016 HMPREF9228_RS05290 6f4306633ceb3d3918e07530cc7e53e3 224 SUPERFAMILY SSF55811 32 208 1.14E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS05290 6f4306633ceb3d3918e07530cc7e53e3 224 Gene3D G3DSA:3.90.79.10 32 206 1.7E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS05290 6f4306633ceb3d3918e07530cc7e53e3 224 Pfam PF00293 NUDIX domain 73 193 2.2E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 HMPREF9228_RS05290 6f4306633ceb3d3918e07530cc7e53e3 224 PANTHER PTHR11839:SF9 32 208 6.5E-20 T 22-04-2016 HMPREF9228_RS05290 6f4306633ceb3d3918e07530cc7e53e3 224 ProSitePatterns PS00893 Nudix box signature. 107 128 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 HMPREF9228_RS05435 64480632dcd97e18bd3bee2604a83885 92 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 82 13.824 T 22-04-2016 IPR003482 Transcription factor WhiB HMPREF9228_RS05435 64480632dcd97e18bd3bee2604a83885 92 Pfam PF02467 Transcription factor WhiB 7 75 4.2E-26 T 22-04-2016 IPR003482 Transcription factor WhiB HMPREF9228_RS05435 64480632dcd97e18bd3bee2604a83885 92 PANTHER PTHR38839:SF3 6 91 1.3E-31 T 22-04-2016 HMPREF9228_RS05435 64480632dcd97e18bd3bee2604a83885 92 PANTHER PTHR38839 6 91 1.3E-31 T 22-04-2016 HMPREF9228_RS08655 19b96633624c0f015cef349e0a2d7028 74 SUPERFAMILY SSF103473 14 66 6.67E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 3 460 50.211 T 22-04-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 151 275 5.7E-8 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 PRINTS PR01043 Glycyl-tRNA synthetase signature 138 150 7.9E-54 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 PRINTS PR01043 Glycyl-tRNA synthetase signature 159 176 7.9E-54 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 PRINTS PR01043 Glycyl-tRNA synthetase signature 191 208 7.9E-54 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 PRINTS PR01043 Glycyl-tRNA synthetase signature 405 424 7.9E-54 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 PRINTS PR01043 Glycyl-tRNA synthetase signature 318 330 7.9E-54 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 PRINTS PR01043 Glycyl-tRNA synthetase signature 25 39 7.9E-54 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 PRINTS PR01043 Glycyl-tRNA synthetase signature 208 218 7.9E-54 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 SUPERFAMILY SSF52954 354 460 8.0E-34 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 Gene3D G3DSA:3.40.50.800 365 462 1.5E-39 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 Pfam PF03129 Anticodon binding domain 367 457 8.5E-22 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 SUPERFAMILY SSF55681 5 370 3.67E-125 T 22-04-2016 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 226 2.3E-83 T 22-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 PANTHER PTHR10745 7 464 2.2E-205 T 22-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 Gene3D G3DSA:3.30.930.10 7 91 1.5E-146 T 22-04-2016 HMPREF9228_RS02705 a9ec83b813fc4d3491b6c23086a2211d 490 Gene3D G3DSA:3.30.930.10 123 364 1.5E-146 T 22-04-2016 HMPREF9228_RS00745 ad07106c4da01d1ca018c1316cac10d3 188 SUPERFAMILY SSF55021 101 176 1.66E-20 T 22-04-2016 HMPREF9228_RS00745 ad07106c4da01d1ca018c1316cac10d3 188 Gene3D G3DSA:3.30.70.260 41 93 6.1E-4 T 22-04-2016 HMPREF9228_RS00745 ad07106c4da01d1ca018c1316cac10d3 188 SUPERFAMILY SSF55021 21 117 1.27E-18 T 22-04-2016 HMPREF9228_RS00745 ad07106c4da01d1ca018c1316cac10d3 188 PANTHER PTHR21499 19 183 5.5E-43 T 22-04-2016 HMPREF9228_RS00745 ad07106c4da01d1ca018c1316cac10d3 188 Pfam PF13840 ACT domain 108 168 2.9E-14 T 22-04-2016 IPR027795 GATS-like ACT domain HMPREF9228_RS00745 ad07106c4da01d1ca018c1316cac10d3 188 Pfam PF01842 ACT domain 37 92 4.7E-11 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 HMPREF9228_RS00745 ad07106c4da01d1ca018c1316cac10d3 188 PANTHER PTHR21499:SF27 19 183 5.5E-43 T 22-04-2016 HMPREF9228_RS04600 9de826f900c4422cb76d1fd265c76377 499 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 43 490 8.3E-226 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 HMPREF9228_RS04600 9de826f900c4422cb76d1fd265c76377 499 PANTHER PTHR30508:SF1 43 499 6.5E-233 T 22-04-2016 HMPREF9228_RS04600 9de826f900c4422cb76d1fd265c76377 499 SUPERFAMILY SSF101960 65 496 7.19E-137 T 22-04-2016 HMPREF9228_RS04600 9de826f900c4422cb76d1fd265c76377 499 PANTHER PTHR30508 43 499 6.5E-233 T 22-04-2016 HMPREF9228_RS04600 9de826f900c4422cb76d1fd265c76377 499 Pfam PF01458 Uncharacterized protein family (UPF0051) 245 470 4.0E-71 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 HMPREF9228_RS00015 63cb44384800a24e36fdbdcc4cb849b1 385 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 353 2.5E-18 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal HMPREF9228_RS00015 63cb44384800a24e36fdbdcc4cb849b1 385 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 368 1.2E-81 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS00015 63cb44384800a24e36fdbdcc4cb849b1 385 Gene3D G3DSA:3.40.50.300 1 172 1.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00015 63cb44384800a24e36fdbdcc4cb849b1 385 Gene3D G3DSA:3.40.50.300 250 349 1.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00015 63cb44384800a24e36fdbdcc4cb849b1 385 PANTHER PTHR32182 1 349 1.6E-40 T 22-04-2016 HMPREF9228_RS00015 63cb44384800a24e36fdbdcc4cb849b1 385 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 385 77.589 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS00015 63cb44384800a24e36fdbdcc4cb849b1 385 PANTHER PTHR32182:SF0 1 349 1.6E-40 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 HMPREF9228_RS00015 63cb44384800a24e36fdbdcc4cb849b1 385 SUPERFAMILY SSF52540 1 348 8.75E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03395 f720a07292ede85932de386106928b04 213 Pfam PF13830 Domain of unknown function (DUF4192) 23 208 4.5E-8 T 22-04-2016 IPR025447 Protein of unknown function DUF4192 HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 PANTHER PTHR12383:SF14 23 207 4.0E-47 T 22-04-2016 HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 ProSitePatterns PS00761 Signal peptidases I signature 3. 158 171 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 32 200 7.4E-37 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 SUPERFAMILY SSF51306 44 205 6.28E-45 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 Gene3D G3DSA:2.10.109.10 42 114 1.2E-34 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 Gene3D G3DSA:2.10.109.10 153 208 1.2E-34 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 PANTHER PTHR12383 23 207 4.0E-47 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 Pfam PF00717 Peptidase S24-like 52 129 4.4E-19 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 153 172 6.8E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 46 62 6.8E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 HMPREF9228_RS02050 45a09ba6b58afce8deec08b9b70bb05f 224 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 104 116 6.8E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 HMPREF9228_RS01655 60952de6c8e7d6473cef34eb2f70fd03 388 Gene3D G3DSA:3.40.190.10 313 348 2.3E-26 T 22-04-2016 HMPREF9228_RS01655 60952de6c8e7d6473cef34eb2f70fd03 388 Gene3D G3DSA:3.40.190.10 60 168 2.3E-26 T 22-04-2016 HMPREF9228_RS01655 60952de6c8e7d6473cef34eb2f70fd03 388 Gene3D G3DSA:3.40.190.10 6 26 2.3E-26 T 22-04-2016 HMPREF9228_RS01655 60952de6c8e7d6473cef34eb2f70fd03 388 PANTHER PTHR30006 59 350 1.2E-17 T 22-04-2016 HMPREF9228_RS01655 60952de6c8e7d6473cef34eb2f70fd03 388 Gene3D G3DSA:3.40.190.10 171 312 9.6E-15 T 22-04-2016 HMPREF9228_RS01655 60952de6c8e7d6473cef34eb2f70fd03 388 SUPERFAMILY SSF53850 67 353 2.12E-38 T 22-04-2016 HMPREF9228_RS01655 60952de6c8e7d6473cef34eb2f70fd03 388 Pfam PF13343 Bacterial extracellular solute-binding protein 136 343 2.8E-20 T 22-04-2016 HMPREF9228_RS01655 60952de6c8e7d6473cef34eb2f70fd03 388 PANTHER PTHR30006:SF10 59 350 1.2E-17 T 22-04-2016 HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 ProSitePatterns PS01300 RecR protein signature. 59 80 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 PANTHER PTHR30446 3 199 5.7E-108 T 22-04-2016 HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 SUPERFAMILY SSF111304 5 199 2.62E-73 T 22-04-2016 IPR023627 Recombination protein RecR HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 Pfam PF13662 Toprim domain 82 173 2.9E-24 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 SMART SM00493 82 167 4.1E-13 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 Pfam PF02132 RecR protein 41 80 3.2E-17 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 Gene3D G3DSA:3.40.50.140 115 172 4.2E-4 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 TIGRFAM TIGR00615 recR: recombination protein RecR 5 198 2.7E-79 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 PANTHER PTHR30446:SF0 3 199 5.7E-108 T 22-04-2016 HMPREF9228_RS00685 ac1a531a3935a73a101821abc33c4ef3 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 200 100.654 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 HMPREF9228_RS04735 32f2a63f7a5743571ec2d1ecb0b2e3e0 69 SMART SM00530 6 62 1.2E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS04735 32f2a63f7a5743571ec2d1ecb0b2e3e0 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 2.2E-24 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS04735 32f2a63f7a5743571ec2d1ecb0b2e3e0 69 PANTHER PTHR37301 2 69 6.9E-34 T 22-04-2016 HMPREF9228_RS04735 32f2a63f7a5743571ec2d1ecb0b2e3e0 69 Gene3D G3DSA:1.10.260.40 1 68 2.2E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS04735 32f2a63f7a5743571ec2d1ecb0b2e3e0 69 SUPERFAMILY SSF47413 1 68 1.21E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 PANTHER PTHR18966:SF191 60 296 9.2E-37 T 22-04-2016 HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 Gene3D G3DSA:3.40.190.10 150 258 3.4E-20 T 22-04-2016 HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 SMART SM00062 73 300 7.6E-40 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 PANTHER PTHR18966 60 296 9.2E-37 T 22-04-2016 HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 74 297 1.4E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 SUPERFAMILY SSF53850 65 298 6.39E-54 T 22-04-2016 HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 SUPERFAMILY SSF53850 8 26 6.39E-54 T 22-04-2016 HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 Gene3D G3DSA:3.40.190.10 70 149 5.1E-28 T 22-04-2016 HMPREF9228_RS06660 9b8236f3bcfce5772d873c9c182fa3d4 313 Gene3D G3DSA:3.40.190.10 259 298 5.1E-28 T 22-04-2016 HMPREF9228_RS01475 de4ae6b526153170abe28419ecc61137 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 294 1.6E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01475 de4ae6b526153170abe28419ecc61137 296 SUPERFAMILY SSF161098 60 287 1.3E-66 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01475 de4ae6b526153170abe28419ecc61137 296 Gene3D G3DSA:1.10.3720.10 66 295 7.4E-65 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01475 de4ae6b526153170abe28419ecc61137 296 PANTHER PTHR30193:SF6 4 296 2.8E-107 T 22-04-2016 HMPREF9228_RS01475 de4ae6b526153170abe28419ecc61137 296 PANTHER PTHR30193 4 296 2.8E-107 T 22-04-2016 HMPREF9228_RS00675 3ffe27bac06f642d11239eb452f9d87e 199 Gene3D G3DSA:1.10.357.10 16 193 1.8E-26 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS00675 3ffe27bac06f642d11239eb452f9d87e 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 7.0E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS00675 3ffe27bac06f642d11239eb452f9d87e 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 7.0E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS00675 3ffe27bac06f642d11239eb452f9d87e 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS00675 3ffe27bac06f642d11239eb452f9d87e 199 SUPERFAMILY SSF46689 8 81 2.22E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS00675 3ffe27bac06f642d11239eb452f9d87e 199 PANTHER PTHR30055 3 141 1.3E-18 T 22-04-2016 HMPREF9228_RS09440 10f1e5c399b4dfc818cfc5eec6f3e797 316 PANTHER PTHR30193 11 315 1.7E-74 T 22-04-2016 HMPREF9228_RS09440 10f1e5c399b4dfc818cfc5eec6f3e797 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 304 5.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09440 10f1e5c399b4dfc818cfc5eec6f3e797 316 PANTHER PTHR30193:SF6 11 315 1.7E-74 T 22-04-2016 HMPREF9228_RS09440 10f1e5c399b4dfc818cfc5eec6f3e797 316 Gene3D G3DSA:1.10.3720.10 34 306 8.0E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09440 10f1e5c399b4dfc818cfc5eec6f3e797 316 SUPERFAMILY SSF161098 79 304 4.32E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04375 eccf86dbad6e38fe2300d89546636621 227 Pfam PF12686 Protein of unknown function (DUF3800) 7 196 3.1E-9 T 22-04-2016 IPR024524 Protein of unknown function DUF3800 HMPREF9228_RS03950 20fdbb72c862753a375dc72d4bea77f7 147 Gene3D G3DSA:2.60.200.20 46 140 1.3E-29 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS03950 20fdbb72c862753a375dc72d4bea77f7 147 SMART SM00240 68 118 2.7E-16 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS03950 20fdbb72c862753a375dc72d4bea77f7 147 Pfam PF00498 FHA domain 69 132 2.8E-21 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS03950 20fdbb72c862753a375dc72d4bea77f7 147 PANTHER PTHR15715 19 132 1.5E-22 T 22-04-2016 HMPREF9228_RS03950 20fdbb72c862753a375dc72d4bea77f7 147 SUPERFAMILY SSF49879 24 140 1.03E-31 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 SUPERFAMILY SSF56300 214 283 5.22E-20 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 SUPERFAMILY SSF56300 323 384 5.22E-20 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 SUPERFAMILY SSF56300 43 169 5.22E-20 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 Gene3D G3DSA:3.60.21.10 229 375 8.8E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 Gene3D G3DSA:3.60.21.10 196 197 8.8E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 Gene3D G3DSA:3.60.21.10 42 148 8.8E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 PANTHER PTHR32440 119 169 7.7E-14 T 22-04-2016 HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 PANTHER PTHR32440 212 286 7.7E-14 T 22-04-2016 HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 PANTHER PTHR32440 312 389 7.7E-14 T 22-04-2016 HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 PANTHER PTHR32440 30 95 7.7E-14 T 22-04-2016 HMPREF9228_RS08930 ca84472cd03c849957be2b41c672843b 447 Pfam PF00149 Calcineurin-like phosphoesterase 45 162 1.7E-4 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 HMPREF9228_RS03150 d27e45c483c36d7be1d455d4ac042656 426 Pfam PF02445 Quinolinate synthetase A protein 76 422 3.5E-111 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 HMPREF9228_RS03150 d27e45c483c36d7be1d455d4ac042656 426 SUPERFAMILY SSF142754 81 423 1.18E-98 T 22-04-2016 HMPREF9228_RS03150 d27e45c483c36d7be1d455d4ac042656 426 Hamap MF_00569 Quinolinate synthase A [nadA]. 69 424 53.771 T 22-04-2016 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 HMPREF9228_RS03150 d27e45c483c36d7be1d455d4ac042656 426 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 70 424 7.3E-95 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 HMPREF9228_RS03150 d27e45c483c36d7be1d455d4ac042656 426 PANTHER PTHR30573 61 425 2.2E-155 T 22-04-2016 HMPREF9228_RS03150 d27e45c483c36d7be1d455d4ac042656 426 PANTHER PTHR30573:SF0 61 425 2.2E-155 T 22-04-2016 HMPREF9228_RS06030 b2113524482b0ff616250db1361b8e60 224 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 156 184 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 HMPREF9228_RS06030 b2113524482b0ff616250db1361b8e60 224 SUPERFAMILY SSF51161 22 211 5.96E-48 T 22-04-2016 IPR011004 Trimeric LpxA-like HMPREF9228_RS06030 b2113524482b0ff616250db1361b8e60 224 SMART SM01266 21 76 2.0E-7 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 HMPREF9228_RS06030 b2113524482b0ff616250db1361b8e60 224 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 182 5.5E-12 T 22-04-2016 IPR001451 Hexapeptide repeat HMPREF9228_RS06030 b2113524482b0ff616250db1361b8e60 224 PANTHER PTHR23416:SF60 46 206 2.6E-54 T 22-04-2016 HMPREF9228_RS06030 b2113524482b0ff616250db1361b8e60 224 Gene3D G3DSA:2.160.10.10 18 205 2.8E-51 T 22-04-2016 HMPREF9228_RS06030 b2113524482b0ff616250db1361b8e60 224 Pfam PF12464 Maltose acetyltransferase 24 75 6.2E-5 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 HMPREF9228_RS06030 b2113524482b0ff616250db1361b8e60 224 PANTHER PTHR23416 46 206 2.6E-54 T 22-04-2016 HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 Pfam PF03725 3' exoribonuclease family, domain 2 173 239 4.6E-9 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 15 251 2.2E-108 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 SUPERFAMILY SSF54211 14 196 5.06E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 Gene3D G3DSA:3.30.230.70 16 251 2.4E-27 T 22-04-2016 IPR027408 PNPase/RNase PH domain HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 Pfam PF01138 3' exoribonuclease family, domain 1 23 153 1.3E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 PANTHER PTHR11953:SF0 1 251 2.3E-81 T 22-04-2016 HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 Hamap MF_00564 Ribonuclease PH [rph]. 14 252 45.228 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 ProSitePatterns PS01277 Ribonuclease PH signature. 129 141 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 PANTHER PTHR11953 1 251 2.3E-81 T 22-04-2016 HMPREF9228_RS02005 63d382dcf3dcfbc69200566f54adb8cc 254 SUPERFAMILY SSF55666 170 251 6.02E-23 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 HMPREF9228_RS06600 3b9db2ce9249abe81aec559bad577e30 544 PIRSF PIRSF002741 32 538 1.0E-83 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 HMPREF9228_RS06600 3b9db2ce9249abe81aec559bad577e30 544 Gene3D G3DSA:3.10.105.10 325 506 9.4E-37 T 22-04-2016 HMPREF9228_RS06600 3b9db2ce9249abe81aec559bad577e30 544 PANTHER PTHR30290 23 523 7.0E-96 T 22-04-2016 HMPREF9228_RS06600 3b9db2ce9249abe81aec559bad577e30 544 Gene3D G3DSA:3.90.76.10 81 222 1.2E-35 T 22-04-2016 HMPREF9228_RS06600 3b9db2ce9249abe81aec559bad577e30 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 114 449 1.4E-72 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain HMPREF9228_RS06600 3b9db2ce9249abe81aec559bad577e30 544 Gene3D G3DSA:3.40.190.10 223 324 8.1E-29 T 22-04-2016 HMPREF9228_RS06600 3b9db2ce9249abe81aec559bad577e30 544 SUPERFAMILY SSF53850 71 528 5.2E-103 T 22-04-2016 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 SMART SM00400 37 91 4.4E-26 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 Pfam PF08275 DNA primase catalytic core, N-terminal domain 129 256 7.2E-35 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 TIGRFAM TIGR01391 dnaG: DNA primase 4 305 3.2E-88 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 SUPERFAMILY SSF57783 4 101 4.76E-30 T 22-04-2016 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 PIRSF PIRSF002811 2 601 9.0E-132 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 PANTHER PTHR30313 3 306 4.7E-107 T 22-04-2016 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 PANTHER PTHR30313 329 673 4.7E-107 T 22-04-2016 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 Hamap MF_00974 DNA primase [dnaG]. 4 681 23.706 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 Pfam PF01807 CHC2 zinc finger 6 102 7.1E-29 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 SUPERFAMILY SSF56731 119 447 2.41E-85 T 22-04-2016 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 Pfam PF13662 Toprim domain 265 350 7.1E-15 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 Gene3D G3DSA:3.40.1360.10 246 391 8.8E-38 T 22-04-2016 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 Pfam PF10410 DnaB-helicase binding domain of primase 394 448 1.6E-11 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 Gene3D G3DSA:3.90.980.10 119 244 1.3E-36 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 Gene3D G3DSA:3.90.580.10 2 102 2.0E-33 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 HMPREF9228_RS06530 a0f35c8f58e6d13e466aac6a19e6c670 700 SMART SM00493 264 357 2.0E-8 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS01670 52173d333f53a9a239c8a9259abdfb8a 409 SMART SM00382 79 262 2.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01670 52173d333f53a9a239c8a9259abdfb8a 409 ProSitePatterns PS00211 ABC transporters family signature. 185 199 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS01670 52173d333f53a9a239c8a9259abdfb8a 409 SUPERFAMILY SSF52540 53 291 2.99E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01670 52173d333f53a9a239c8a9259abdfb8a 409 PANTHER PTHR24220 54 311 9.0E-112 T 22-04-2016 HMPREF9228_RS01670 52173d333f53a9a239c8a9259abdfb8a 409 Pfam PF00005 ABC transporter 70 212 3.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS01670 52173d333f53a9a239c8a9259abdfb8a 409 SUPERFAMILY SSF50331 288 380 8.5E-10 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal HMPREF9228_RS01670 52173d333f53a9a239c8a9259abdfb8a 409 Gene3D G3DSA:3.40.50.300 53 285 1.9E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01670 52173d333f53a9a239c8a9259abdfb8a 409 PANTHER PTHR24220:SF123 54 311 9.0E-112 T 22-04-2016 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 SUPERFAMILY SSF56672 18 253 1.78E-72 T 22-04-2016 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 PANTHER PTHR11076 22 373 1.3E-104 T 22-04-2016 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 Gene3D G3DSA:1.10.150.20 185 258 1.7E-17 T 22-04-2016 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 Hamap MF_01113 DNA polymerase IV [dinB]. 20 382 30.381 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 SUPERFAMILY SSF100879 258 345 3.34E-21 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 Pfam PF00817 impB/mucB/samB family 26 171 7.2E-48 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 257 374 1.2E-15 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 Gene3D G3DSA:3.30.70.270 83 181 4.5E-27 T 22-04-2016 HMPREF9228_RS08335 90c811150d15a5582330108a9c9f6640 424 Gene3D G3DSA:3.30.1490.100 261 375 2.0E-26 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS02500 b6ddfa4b679f48b52691a75cd5651855 359 PANTHER PTHR23024 81 359 5.9E-23 T 22-04-2016 HMPREF9228_RS02500 b6ddfa4b679f48b52691a75cd5651855 359 Pfam PF07859 alpha/beta hydrolase fold 111 316 5.0E-19 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 HMPREF9228_RS02500 b6ddfa4b679f48b52691a75cd5651855 359 PANTHER PTHR23024:SF47 81 359 5.9E-23 T 22-04-2016 HMPREF9228_RS02500 b6ddfa4b679f48b52691a75cd5651855 359 SUPERFAMILY SSF53474 76 350 6.13E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS02500 b6ddfa4b679f48b52691a75cd5651855 359 Gene3D G3DSA:3.40.50.1820 78 348 6.2E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS01940 db16e06df321983cc93e94d22ffd8398 92 Pfam PF03869 Arc-like DNA binding domain 9 40 2.2E-5 T 22-04-2016 IPR005569 Arc-like DNA binding domain GO:0003677 HMPREF9228_RS01940 db16e06df321983cc93e94d22ffd8398 92 Gene3D G3DSA:1.10.1220.10 9 68 2.1E-9 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 HMPREF9228_RS01940 db16e06df321983cc93e94d22ffd8398 92 SUPERFAMILY SSF47598 2 62 1.47E-11 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 ProSitePatterns PS00221 MIP family signature. 67 75 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 PANTHER PTHR19139:SF147 3 242 6.7E-78 T 22-04-2016 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 PRINTS PR00783 Major intrinsic protein family signature 141 159 5.2E-41 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 PRINTS PR00783 Major intrinsic protein family signature 7 26 5.2E-41 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 PRINTS PR00783 Major intrinsic protein family signature 221 241 5.2E-41 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 PRINTS PR00783 Major intrinsic protein family signature 174 196 5.2E-41 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 PRINTS PR00783 Major intrinsic protein family signature 49 73 5.2E-41 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 PRINTS PR00783 Major intrinsic protein family signature 86 105 5.2E-41 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 Pfam PF00230 Major intrinsic protein 7 238 2.1E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 PANTHER PTHR19139 3 242 6.7E-78 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 Gene3D G3DSA:1.20.1080.10 3 242 4.1E-85 T 22-04-2016 IPR023271 Aquaporin-like HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 SUPERFAMILY SSF81338 5 242 1.7E-68 T 22-04-2016 IPR023271 Aquaporin-like HMPREF9228_RS01365 796c68b2838f0843110f05f4560cf664 244 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 238 7.2E-55 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS00410 1abe64cf2edb44415b11b8fac7ae27cd 110 Pfam PF01906 Putative heavy-metal-binding 2 105 5.9E-40 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 HMPREF9228_RS00410 1abe64cf2edb44415b11b8fac7ae27cd 110 PANTHER PTHR34068:SF1 1 104 2.6E-38 T 22-04-2016 HMPREF9228_RS00410 1abe64cf2edb44415b11b8fac7ae27cd 110 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 2 106 24.127 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 HMPREF9228_RS00410 1abe64cf2edb44415b11b8fac7ae27cd 110 Gene3D G3DSA:3.30.110.70 3 105 1.9E-39 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 HMPREF9228_RS00410 1abe64cf2edb44415b11b8fac7ae27cd 110 PANTHER PTHR34068 1 104 2.6E-38 T 22-04-2016 HMPREF9228_RS00410 1abe64cf2edb44415b11b8fac7ae27cd 110 SUPERFAMILY SSF117782 2 106 1.2E-38 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 HMPREF9228_RS07730 cfe851178b8b4eb27a26043a2c3e7ab3 87 SUPERFAMILY SSF56349 20 80 2.62E-14 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS07730 cfe851178b8b4eb27a26043a2c3e7ab3 87 Pfam PF00589 Phage integrase family 15 69 7.7E-9 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS07730 cfe851178b8b4eb27a26043a2c3e7ab3 87 Gene3D G3DSA:1.10.443.10 20 80 1.0E-14 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 Pfam PF09179 TilS substrate binding domain 310 369 3.7E-5 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 Pfam PF01171 PP-loop family 45 215 5.2E-38 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 Gene3D G3DSA:3.40.50.620 45 209 1.3E-12 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 SUPERFAMILY SSF82829 304 370 1.73E-8 T 22-04-2016 HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 SUPERFAMILY SSF82829 245 275 1.73E-8 T 22-04-2016 HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 45 236 5.0E-41 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 PANTHER PTHR11807 45 276 3.0E-44 T 22-04-2016 HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 PANTHER PTHR11807:SF2 45 276 3.0E-44 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 14 350 20.615 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 HMPREF9228_RS07495 cfb8f0a2df071fce12d9eb5ce0b4fac6 383 SUPERFAMILY SSF52402 45 264 2.22E-42 T 22-04-2016 HMPREF9228_RS03295 d8f4d0aa48ffef6f5453729f8351355f 273 PANTHER PTHR23291:SF42 53 273 8.2E-45 T 22-04-2016 HMPREF9228_RS03295 d8f4d0aa48ffef6f5453729f8351355f 273 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 57 269 3.2E-44 T 22-04-2016 HMPREF9228_RS03295 d8f4d0aa48ffef6f5453729f8351355f 273 PANTHER PTHR23291 53 273 8.2E-45 T 22-04-2016 IPR006214 Bax inhibitor 1-related HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 PANTHER PTHR10314 277 668 7.7E-202 T 22-04-2016 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 Gene3D G3DSA:3.40.50.1100 374 452 2.5E-22 T 22-04-2016 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 PANTHER PTHR10314:SF3 277 668 7.7E-202 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 Gene3D G3DSA:3.20.20.70 2 261 3.4E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 356 370 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 269 673 48.227 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 SUPERFAMILY SSF51366 17 258 2.17E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 52 69 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 Gene3D G3DSA:3.40.50.1100 453 674 1.4E-81 T 22-04-2016 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 278 669 1.9E-168 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 256 2.3E-79 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 SUPERFAMILY SSF53686 276 671 1.75E-127 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 258 32.447 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 HMPREF9228_RS03900 79bd3c1baf1d425dc7d16a26eb1e5ad8 695 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 323 655 6.8E-44 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme HMPREF9228_RS02235 4d3fc72af975dc9f1a2a6c086da1d9e0 229 Pfam PF13333 Integrase core domain 76 131 1.3E-9 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS02235 4d3fc72af975dc9f1a2a6c086da1d9e0 229 SUPERFAMILY SSF53098 65 131 3.98E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS08880 65164bf6955f8fad0c7d38e64edd1642 283 SMART SM00062 41 269 6.9E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS08880 65164bf6955f8fad0c7d38e64edd1642 283 Gene3D G3DSA:3.40.190.10 228 269 5.7E-24 T 22-04-2016 HMPREF9228_RS08880 65164bf6955f8fad0c7d38e64edd1642 283 Gene3D G3DSA:3.40.190.10 39 119 5.7E-24 T 22-04-2016 HMPREF9228_RS08880 65164bf6955f8fad0c7d38e64edd1642 283 PANTHER PTHR18966 52 270 3.6E-12 T 22-04-2016 HMPREF9228_RS08880 65164bf6955f8fad0c7d38e64edd1642 283 PANTHER PTHR18966:SF205 52 270 3.6E-12 T 22-04-2016 HMPREF9228_RS08880 65164bf6955f8fad0c7d38e64edd1642 283 Gene3D G3DSA:3.40.190.10 120 224 8.4E-13 T 22-04-2016 HMPREF9228_RS08880 65164bf6955f8fad0c7d38e64edd1642 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 267 6.5E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS08880 65164bf6955f8fad0c7d38e64edd1642 283 SUPERFAMILY SSF53850 12 269 2.9E-38 T 22-04-2016 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 1377 1400 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 543 562 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 840 864 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 392 412 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 1356 1375 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 1494 1515 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 1249 1271 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 1271 1292 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 727 745 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 1458 1477 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 523 541 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PRINTS PR01483 Fatty acid synthase signature 418 436 1.8E-95 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF51735 2171 2418 1.4E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.20.20.70 389 628 1.6E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2785 2801 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.40.366.10 1593 1648 1.2E-42 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.40.366.10 263 353 1.1E-17 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.40.366.10 1361 1501 1.2E-42 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.40.366.10 1686 1752 1.2E-42 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.40.366.10 104 163 1.1E-17 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Pfam PF00698 Acyl transferase domain 1366 1562 5.1E-35 T 22-04-2016 IPR014043 Acyl transferase HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF52151 1595 1616 9.59E-31 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF52151 1662 1734 9.59E-31 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.40.50.720 2170 2254 1.3E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.40.47.10 2900 3064 6.6E-27 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2891 3015 9.3E-22 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF52151 1364 1507 9.59E-31 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2653 2879 2.9E-22 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF53901 2657 2889 2.85E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF55048 180 237 8.37E-6 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF53901 2853 3074 1.68E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF51412 385 651 3.11E-14 T 22-04-2016 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF54637 1242 1359 7.46E-20 T 22-04-2016 IPR029069 HotDog domain HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 17 368 8.8E-4 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Pfam PF01575 MaoC like domain 1245 1343 3.1E-14 T 22-04-2016 IPR002539 MaoC-like domain HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.40.47.10 2654 2893 5.6E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Pfam PF08354 Domain of unknown function (DUF1729) 846 898 1.5E-17 T 22-04-2016 IPR013565 Domain of unknown function DUF1729 GO:0004318|GO:0055114 KEGG: 00061+2.3.1.39+4.2.1.59+1.3.1.9+3.1.2.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-4381|MetaCyc: PWY-5142|MetaCyc: PWY-5147|MetaCyc: PWY-5366|MetaCyc: PWY-5367|MetaCyc: PWY-5966|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-6799|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7723|MetaCyc: PWYG-321 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF52151 265 351 1.07E-11 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 SUPERFAMILY SSF52151 16 165 1.07E-11 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PANTHER PTHR10982:SF17 86 775 0.0 T 22-04-2016 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PANTHER PTHR10982:SF17 795 1815 0.0 T 22-04-2016 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PANTHER PTHR10982 86 775 0.0 T 22-04-2016 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 PANTHER PTHR10982 795 1815 0.0 T 22-04-2016 HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.10.129.10 1196 1360 2.4E-30 T 22-04-2016 IPR029069 HotDog domain HMPREF9228_RS08665 e544a78de468106fae67abd6c6dba787 3160 Gene3D G3DSA:3.30.70.250 179 236 2.6E-4 T 22-04-2016 HMPREF9228_RS00785 c30be7599227e70ae27db4ae0ec201b4 300 PANTHER PTHR30193:SF20 1 294 8.5E-33 T 22-04-2016 HMPREF9228_RS00785 c30be7599227e70ae27db4ae0ec201b4 300 SUPERFAMILY SSF161098 22 294 2.62E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00785 c30be7599227e70ae27db4ae0ec201b4 300 Gene3D G3DSA:1.10.3720.10 20 287 1.6E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00785 c30be7599227e70ae27db4ae0ec201b4 300 PANTHER PTHR30193 1 294 8.5E-33 T 22-04-2016 HMPREF9228_RS00785 c30be7599227e70ae27db4ae0ec201b4 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 296 2.1E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02510 5ebfb479760273e261156c8b45113153 481 Pfam PF03993 Domain of Unknown Function (DUF349) 163 236 1.9E-9 T 22-04-2016 IPR007139 Protein of unknown function DUF349 HMPREF9228_RS02510 5ebfb479760273e261156c8b45113153 481 Pfam PF03993 Domain of Unknown Function (DUF349) 325 401 3.8E-18 T 22-04-2016 IPR007139 Protein of unknown function DUF349 HMPREF9228_RS02510 5ebfb479760273e261156c8b45113153 481 Pfam PF03993 Domain of Unknown Function (DUF349) 248 320 4.8E-19 T 22-04-2016 IPR007139 Protein of unknown function DUF349 HMPREF9228_RS06865 2d2f8c385d2d0e046f2fe4eb1a44297e 418 ProSitePatterns PS00893 Nudix box signature. 316 337 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 HMPREF9228_RS06865 2d2f8c385d2d0e046f2fe4eb1a44297e 418 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 246 273 1.1E-8 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 HMPREF9228_RS06865 2d2f8c385d2d0e046f2fe4eb1a44297e 418 SUPERFAMILY SSF55811 230 414 8.26E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS06865 2d2f8c385d2d0e046f2fe4eb1a44297e 418 PANTHER PTHR22769:SF7 237 417 2.4E-51 T 22-04-2016 HMPREF9228_RS06865 2d2f8c385d2d0e046f2fe4eb1a44297e 418 PANTHER PTHR22769 237 417 2.4E-51 T 22-04-2016 HMPREF9228_RS06865 2d2f8c385d2d0e046f2fe4eb1a44297e 418 Gene3D G3DSA:3.90.79.10 241 416 8.6E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS06865 2d2f8c385d2d0e046f2fe4eb1a44297e 418 Pfam PF00293 NUDIX domain 284 390 4.2E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 SUPERFAMILY SSF54999 5 102 1.83E-37 T 22-04-2016 IPR027486 Ribosomal protein S10 domain HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 PANTHER PTHR11700 1 102 1.6E-49 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 7.2E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-21 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-21 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-21 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 SMART SM01403 7 101 9.8E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.5E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 Gene3D G3DSA:3.30.70.600 4 102 2.4E-43 T 22-04-2016 IPR027486 Ribosomal protein S10 domain HMPREF9228_RS08200 1c2bb644decc14a0397b16b110da518d 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.819 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 PANTHER PTHR30146 1 335 1.4E-74 T 22-04-2016 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 Gene3D G3DSA:1.10.260.40 5 54 7.0E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 Gene3D G3DSA:3.40.50.2300 179 313 8.5E-34 T 22-04-2016 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 46 5.6E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 SUPERFAMILY SSF47413 3 60 2.67E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 Pfam PF13377 Periplasmic binding protein-like domain 172 334 1.2E-31 T 22-04-2016 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 Gene3D G3DSA:3.40.50.2300 55 178 3.6E-26 T 22-04-2016 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 SMART SM00354 2 72 7.4E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS09350 d15830c6bd44701ec085f7453daa1f32 338 SUPERFAMILY SSF53822 69 335 6.89E-47 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS08600 051f8995ba822e4de16eead8d1e2d921 338 Gene3D G3DSA:3.40.1190.20 13 332 1.3E-37 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS08600 051f8995ba822e4de16eead8d1e2d921 338 Pfam PF00294 pfkB family carbohydrate kinase 14 319 6.7E-20 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB HMPREF9228_RS08600 051f8995ba822e4de16eead8d1e2d921 338 PANTHER PTHR10584 1 336 1.8E-14 T 22-04-2016 HMPREF9228_RS08600 051f8995ba822e4de16eead8d1e2d921 338 SUPERFAMILY SSF53613 14 336 8.89E-34 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 SUPERFAMILY SSF88713 263 533 1.59E-75 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 SUPERFAMILY SSF74650 683 1038 1.79E-40 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 Pfam PF09261 Alpha mannosidase middle domain 537 616 1.3E-25 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 Gene3D G3DSA:1.20.1270.50 540 637 6.7E-20 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 PANTHER PTHR11607 182 985 6.7E-241 T 22-04-2016 HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 669 1036 7.9E-58 T 22-04-2016 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0006013|GO:0015923 HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 Gene3D G3DSA:3.20.110.10 219 539 3.1E-91 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 SUPERFAMILY SSF88688 536 635 7.85E-23 T 22-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 SMART SM00872 537 616 5.2E-33 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 PANTHER PTHR11607:SF15 182 985 6.7E-241 T 22-04-2016 HMPREF9228_RS03490 205d72a16c67cd9318d8499a5bdec461 1039 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 267 530 3.2E-90 T 22-04-2016 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0005975 HMPREF9228_RS03060 053c20622b8b1bda244b97a70078232e 314 PANTHER PTHR10091 1 210 1.4E-23 T 22-04-2016 HMPREF9228_RS03060 053c20622b8b1bda244b97a70078232e 314 Pfam PF01263 Aldose 1-epimerase 11 309 1.0E-37 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 HMPREF9228_RS03060 053c20622b8b1bda244b97a70078232e 314 SUPERFAMILY SSF74650 4 309 1.05E-60 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS03060 053c20622b8b1bda244b97a70078232e 314 Gene3D G3DSA:2.70.98.10 4 310 8.2E-46 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS08475 b922a4d8615e3a081fbb6f1d4ee96146 435 SUPERFAMILY SSF103473 21 432 1.83E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS08475 b922a4d8615e3a081fbb6f1d4ee96146 435 Gene3D G3DSA:1.20.1250.20 24 232 9.6E-24 T 22-04-2016 HMPREF9228_RS08475 b922a4d8615e3a081fbb6f1d4ee96146 435 Gene3D G3DSA:1.20.1250.20 246 431 1.5E-22 T 22-04-2016 HMPREF9228_RS08475 b922a4d8615e3a081fbb6f1d4ee96146 435 PANTHER PTHR23508 20 434 2.1E-165 T 22-04-2016 HMPREF9228_RS08475 b922a4d8615e3a081fbb6f1d4ee96146 435 Pfam PF07690 Major Facilitator Superfamily 41 377 7.7E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS08475 b922a4d8615e3a081fbb6f1d4ee96146 435 PANTHER PTHR23508:SF16 20 434 2.1E-165 T 22-04-2016 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 Gene3D G3DSA:3.40.50.170 2 206 6.9E-55 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 Pfam PF02911 Formyl transferase, C-terminal domain 204 328 7.0E-23 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 SUPERFAMILY SSF50486 205 332 7.22E-22 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 Gene3D G3DSA:3.10.25.10 208 332 5.3E-31 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 331 31.805 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 329 5.8E-68 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 Pfam PF00551 Formyl transferase 8 181 4.1E-31 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 SUPERFAMILY SSF53328 3 204 4.84E-52 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 PANTHER PTHR11138 2 243 1.6E-86 T 22-04-2016 HMPREF9228_RS02290 f156f7489a8341186da08e02b6981f98 337 PANTHER PTHR11138 264 330 1.6E-86 T 22-04-2016 HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 PANTHER PTHR31964 168 321 7.2E-23 T 22-04-2016 HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 Gene3D G3DSA:3.40.50.620 177 321 3.9E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 SUPERFAMILY SSF52402 9 146 1.09E-21 T 22-04-2016 HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 PANTHER PTHR31964:SF42 168 321 7.2E-23 T 22-04-2016 HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 PRINTS PR01438 Universal stress protein signature 281 293 2.5E-12 T 22-04-2016 IPR006015 Universal stress protein A HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 PRINTS PR01438 Universal stress protein signature 299 321 2.5E-12 T 22-04-2016 IPR006015 Universal stress protein A HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 PRINTS PR01438 Universal stress protein signature 183 201 2.5E-12 T 22-04-2016 IPR006015 Universal stress protein A HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 Pfam PF00582 Universal stress protein family 184 321 3.8E-21 T 22-04-2016 IPR006016 UspA GO:0006950 HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 Pfam PF00582 Universal stress protein family 10 146 4.2E-15 T 22-04-2016 IPR006016 UspA GO:0006950 HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 Gene3D G3DSA:3.40.50.620 9 146 1.9E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS02480 d528500b4b2ca2868948c846948e7db1 321 SUPERFAMILY SSF52402 184 321 3.52E-23 T 22-04-2016 HMPREF9228_RS00390 b3aaf3f915da0510dad21ffb026945c6 353 Gene3D G3DSA:1.10.3290.10 21 282 9.1E-58 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS00390 b3aaf3f915da0510dad21ffb026945c6 353 SUPERFAMILY SSF140931 86 282 3.4E-36 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS00390 b3aaf3f915da0510dad21ffb026945c6 353 PANTHER PTHR13504 41 350 3.5E-28 T 22-04-2016 HMPREF9228_RS00390 b3aaf3f915da0510dad21ffb026945c6 353 Pfam PF02661 Fic/DOC family 109 215 4.9E-17 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS01635 507f43baf685b0ba603e605b7e6785dc 129 Pfam PF01042 Endoribonuclease L-PSP 11 128 1.0E-35 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family HMPREF9228_RS01635 507f43baf685b0ba603e605b7e6785dc 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 6 128 7.7E-40 T 22-04-2016 IPR006056 RidA family HMPREF9228_RS01635 507f43baf685b0ba603e605b7e6785dc 129 PANTHER PTHR11803 5 129 9.7E-42 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family HMPREF9228_RS01635 507f43baf685b0ba603e605b7e6785dc 129 Gene3D G3DSA:3.30.1330.40 6 128 2.5E-39 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like HMPREF9228_RS01635 507f43baf685b0ba603e605b7e6785dc 129 SUPERFAMILY SSF55298 5 128 4.56E-38 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like HMPREF9228_RS07195 d74f938f8192be90db4b87ff1731ed8c 243 SUPERFAMILY SSF46689 41 113 1.65E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS07195 d74f938f8192be90db4b87ff1731ed8c 243 PANTHER PTHR30055:SF33 37 103 3.4E-20 T 22-04-2016 HMPREF9228_RS07195 d74f938f8192be90db4b87ff1731ed8c 243 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 67 1.3E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS07195 d74f938f8192be90db4b87ff1731ed8c 243 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 75 98 1.3E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS07195 d74f938f8192be90db4b87ff1731ed8c 243 Gene3D G3DSA:1.10.357.10 41 228 1.3E-32 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS07195 d74f938f8192be90db4b87ff1731ed8c 243 Pfam PF00440 Bacterial regulatory proteins, tetR family 54 100 9.5E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS07195 d74f938f8192be90db4b87ff1731ed8c 243 PANTHER PTHR30055 37 103 3.4E-20 T 22-04-2016 HMPREF9228_RS09295 cb003ac982722ed2f15e23257341e352 313 SUPERFAMILY SSF143631 29 310 5.36E-48 T 22-04-2016 IPR003374 ApbE-like domain HMPREF9228_RS09295 cb003ac982722ed2f15e23257341e352 313 Pfam PF02424 ApbE family 31 282 4.6E-35 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 HMPREF9228_RS09295 cb003ac982722ed2f15e23257341e352 313 PANTHER PTHR30040 34 313 2.9E-15 T 22-04-2016 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Gene3D G3DSA:3.90.199.10 370 435 1.6E-113 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Gene3D G3DSA:3.90.199.10 63 272 1.6E-113 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 65 508 3.6E-147 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 PANTHER PTHR10169:SF48 35 825 0.0 T 22-04-2016 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Gene3D G3DSA:3.30.1360.40 273 369 1.1E-29 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 36 853 26.85 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 41 851 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 639 6.2E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 755 802 5.0E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 696 2.3E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 542 586 3.3E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 812 849 2.8E-6 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 700 748 2.2E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 SUPERFAMILY SSF56719 63 523 7.06E-169 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 Gene3D G3DSA:2.120.10.90 533 850 3.0E-117 T 22-04-2016 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 PANTHER PTHR10169 35 825 0.0 T 22-04-2016 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 SUPERFAMILY SSF101904 535 860 7.72E-99 T 22-04-2016 HMPREF9228_RS00030 e90963a7bfffd4a39a36378e255576aa 896 SMART SM00434 44 501 4.3E-262 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS03870 ec3e9f9e63497fd7850faa1d6c6c462e 274 SUPERFAMILY SSF53383 7 262 1.85E-27 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS03870 ec3e9f9e63497fd7850faa1d6c6c462e 274 PANTHER PTHR11601 9 262 4.0E-28 T 22-04-2016 HMPREF9228_RS03870 ec3e9f9e63497fd7850faa1d6c6c462e 274 Gene3D G3DSA:3.40.640.10 9 150 3.4E-19 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS03870 ec3e9f9e63497fd7850faa1d6c6c462e 274 PANTHER PTHR11601:SF32 9 262 4.0E-28 T 22-04-2016 HMPREF9228_RS03870 ec3e9f9e63497fd7850faa1d6c6c462e 274 Pfam PF00266 Aminotransferase class-V 10 178 3.0E-6 T 22-04-2016 IPR000192 Aminotransferase class V domain HMPREF9228_RS08050 617cf7ca08d84c141f76311d820990e3 266 SUPERFAMILY SSF54001 91 240 3.5E-38 T 22-04-2016 HMPREF9228_RS08050 617cf7ca08d84c141f76311d820990e3 266 Pfam PF01841 Transglutaminase-like superfamily 126 217 7.1E-23 T 22-04-2016 IPR002931 Transglutaminase-like HMPREF9228_RS08050 617cf7ca08d84c141f76311d820990e3 266 SMART SM00460 161 219 3.9E-17 T 22-04-2016 IPR002931 Transglutaminase-like HMPREF9228_RS08050 617cf7ca08d84c141f76311d820990e3 266 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 11 80 2.7E-10 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal HMPREF9228_RS08050 617cf7ca08d84c141f76311d820990e3 266 Gene3D G3DSA:3.90.260.10 164 224 1.7E-9 T 22-04-2016 IPR002931 Transglutaminase-like HMPREF9228_RS08050 617cf7ca08d84c141f76311d820990e3 266 PANTHER PTHR33490 127 251 4.7E-35 T 22-04-2016 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 550 670 1.4E-39 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 612 624 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 PANTHER PTHR30175:SF1 550 645 4.1E-91 T 22-04-2016 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 PANTHER PTHR30175:SF1 456 518 4.1E-91 T 22-04-2016 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 PANTHER PTHR30175:SF1 1 440 4.1E-91 T 22-04-2016 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 Pfam PF02378 Phosphotransferase system, EIIC 127 423 2.1E-32 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 SUPERFAMILY SSF55604 7 80 1.31E-16 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.5E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 PANTHER PTHR30175 550 645 4.1E-91 T 22-04-2016 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 PANTHER PTHR30175 456 518 4.1E-91 T 22-04-2016 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 PANTHER PTHR30175 1 440 4.1E-91 T 22-04-2016 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 Gene3D G3DSA:2.70.70.10 546 694 3.4E-54 T 22-04-2016 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 549 672 6.8E-45 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 Gene3D G3DSA:3.30.1360.60 2 80 6.4E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 HMPREF9228_RS07965 ceec8fd2c8379d55e9527bfd92a081ff 696 SUPERFAMILY SSF51261 547 692 8.89E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif HMPREF9228_RS01880 e259d564d1d6085aa8f7da47ea2c2f93 405 PANTHER PTHR37419 128 325 1.9E-14 T 22-04-2016 HMPREF9228_RS01880 e259d564d1d6085aa8f7da47ea2c2f93 405 PANTHER PTHR37419:SF2 128 325 1.9E-14 T 22-04-2016 HMPREF9228_RS01880 e259d564d1d6085aa8f7da47ea2c2f93 405 Pfam PF07804 HipA-like C-terminal domain 244 376 7.7E-20 T 22-04-2016 IPR012893 HipA-like, C-terminal HMPREF9228_RS01880 e259d564d1d6085aa8f7da47ea2c2f93 405 Pfam PF13657 HipA N-terminal domain 19 97 2.3E-5 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 HMPREF9228_RS01880 e259d564d1d6085aa8f7da47ea2c2f93 405 Pfam PF07805 HipA-like N-terminal domain 158 233 5.3E-11 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 HMPREF9228_RS09080 b39e909e5828d06743a5fc578ee0e056 275 Pfam PF01061 ABC-2 type transporter 15 196 2.6E-17 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 HMPREF9228_RS09080 b39e909e5828d06743a5fc578ee0e056 275 PANTHER PTHR30413:SF8 10 275 2.5E-41 T 22-04-2016 HMPREF9228_RS09080 b39e909e5828d06743a5fc578ee0e056 275 PANTHER PTHR30413 10 275 2.5E-41 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 HMPREF9228_RS04120 0487a464fc6b0b6ee399afa945104077 263 PANTHER PTHR12149:SF8 112 263 5.1E-30 T 22-04-2016 HMPREF9228_RS04120 0487a464fc6b0b6ee399afa945104077 263 PIRSF PIRSF006221 1 263 3.5E-70 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase HMPREF9228_RS04120 0487a464fc6b0b6ee399afa945104077 263 Pfam PF03881 Fructosamine kinase 12 262 1.4E-36 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase HMPREF9228_RS04120 0487a464fc6b0b6ee399afa945104077 263 PANTHER PTHR12149 112 263 5.1E-30 T 22-04-2016 HMPREF9228_RS04120 0487a464fc6b0b6ee399afa945104077 263 SUPERFAMILY SSF56112 11 89 7.73E-32 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS04120 0487a464fc6b0b6ee399afa945104077 263 SUPERFAMILY SSF56112 116 250 7.73E-32 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS04120 0487a464fc6b0b6ee399afa945104077 263 Gene3D G3DSA:3.90.1200.10 57 235 1.0E-13 T 22-04-2016 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 SUPERFAMILY SSF53738 162 269 5.49E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 458 42.763 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 SUPERFAMILY SSF53738 271 380 1.49E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Gene3D G3DSA:3.40.120.10 3 156 4.9E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Gene3D G3DSA:3.30.310.50 383 458 2.1E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 SUPERFAMILY SSF53738 4 194 5.49E-39 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 137 9.6E-34 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 271 381 9.4E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 387 454 2.1E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 PANTHER PTHR22573 1 459 4.4E-140 T 22-04-2016 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Gene3D G3DSA:3.40.120.10 189 263 2.7E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 164 267 2.3E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 PANTHER PTHR22573:SF15 1 459 4.4E-140 T 22-04-2016 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 456 3.0E-161 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 247 262 5.9E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 187 206 5.9E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 5.9E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 SUPERFAMILY SSF55957 371 459 7.19E-24 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS06705 0f104835ae89f6c467d6cff2884e36ec 461 Gene3D G3DSA:3.40.120.10 264 382 2.2E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 22-04-2016 IPR020845 AMP-binding, conserved site HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 Gene3D G3DSA:3.30.300.30 470 590 7.0E-5 T 22-04-2016 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 Gene3D G3DSA:2.30.38.10 403 466 1.2E-22 T 22-04-2016 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 Gene3D G3DSA:3.40.50.980 194 288 3.8E-28 T 22-04-2016 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 Gene3D G3DSA:3.40.50.980 339 402 3.8E-28 T 22-04-2016 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 Pfam PF00501 AMP-binding enzyme 30 472 4.0E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 SUPERFAMILY SSF56801 17 293 1.11E-115 T 22-04-2016 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 SUPERFAMILY SSF56801 342 599 1.11E-115 T 22-04-2016 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 PANTHER PTHR24096:SF193 10 607 3.6E-173 T 22-04-2016 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 PANTHER PTHR24096 10 607 3.6E-173 T 22-04-2016 HMPREF9228_RS02065 053fc5b4a97fad117c92d0a08a939f90 607 Gene3D G3DSA:3.40.50.980 17 193 6.6E-33 T 22-04-2016 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 PANTHER PTHR11911:SF6 291 482 1.9E-209 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 PANTHER PTHR11911:SF6 1 273 1.9E-209 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 SMART SM00116 147 195 3.8E-4 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 SMART SM00116 83 131 2.0E-7 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 1 450 8.6E-175 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 1 483 82.836 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 Pfam PF00571 CBS domain 80 126 4.3E-8 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 Pfam PF00571 CBS domain 139 192 1.1E-4 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 SMART SM01240 1 470 6.0E-285 T 22-04-2016 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 PANTHER PTHR11911 291 482 1.9E-209 T 22-04-2016 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 286 298 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 1 470 7.0E-148 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 Gene3D G3DSA:3.20.20.70 1 482 5.7E-187 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 PANTHER PTHR11911 1 273 1.9E-209 T 22-04-2016 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 PIRSF PIRSF000130 1 484 2.1E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 SUPERFAMILY SSF54631 52 192 3.54E-30 T 22-04-2016 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 SUPERFAMILY SSF51412 206 474 5.36E-112 T 22-04-2016 HMPREF9228_RS07345 6dd93394a51fadc025783f4befabebd7 487 SUPERFAMILY SSF51412 1 77 5.36E-112 T 22-04-2016 HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 Gene3D G3DSA:3.40.190.10 316 361 1.4E-11 T 22-04-2016 HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 Gene3D G3DSA:3.40.190.10 9 110 1.4E-11 T 22-04-2016 HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 PANTHER PTHR30570 44 374 6.7E-72 T 22-04-2016 HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 PANTHER PTHR30570:SF0 44 374 6.7E-72 T 22-04-2016 HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 SUPERFAMILY SSF53850 52 374 8.57E-76 T 22-04-2016 HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 Pfam PF12849 PBP superfamily domain 41 344 1.2E-51 T 22-04-2016 IPR024370 PBP domain HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 PIRSF PIRSF002756 6 376 3.4E-123 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 52 373 4.6E-63 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 HMPREF9228_RS08460 05a73aada30db37c0571c9784410500a 376 Gene3D G3DSA:3.40.190.10 133 313 6.4E-49 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946 756 987 5.0E-292 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946 328 353 5.0E-292 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946 234 293 5.0E-292 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946 4 175 5.0E-292 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946 388 576 5.0E-292 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946 602 718 5.0E-292 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Gene3D G3DSA:1.10.730.10 789 922 8.2E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 19 985 20.952 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 307 494 1.6E-48 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Gene3D G3DSA:3.40.50.620 233 308 1.2E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Gene3D G3DSA:3.40.50.620 759 788 1.2E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Gene3D G3DSA:3.40.50.620 23 174 1.2E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Gene3D G3DSA:3.40.50.620 545 720 1.2E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 SUPERFAMILY SSF52374 234 312 6.88E-111 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 SUPERFAMILY SSF52374 536 806 6.88E-111 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 SUPERFAMILY SSF52374 24 175 6.88E-111 T 22-04-2016 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 71 81 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 SUPERFAMILY SSF47323 802 984 2.8E-29 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Pfam PF09334 tRNA synthetases class I (M) 68 150 2.7E-13 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Pfam PF08264 Anticodon-binding domain of tRNA 835 947 7.3E-15 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 SUPERFAMILY SSF50677 309 539 1.04E-39 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946:SF7 756 987 5.0E-292 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946:SF7 328 353 5.0E-292 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946:SF7 234 293 5.0E-292 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946:SF7 4 175 5.0E-292 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946:SF7 388 576 5.0E-292 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PANTHER PTHR11946:SF7 602 718 5.0E-292 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PRINTS PR00985 Leucyl-tRNA synthetase signature 671 693 5.8E-39 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PRINTS PR00985 Leucyl-tRNA synthetase signature 155 172 5.8E-39 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PRINTS PR00985 Leucyl-tRNA synthetase signature 620 638 5.8E-39 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PRINTS PR00985 Leucyl-tRNA synthetase signature 704 714 5.8E-39 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 PRINTS PR00985 Leucyl-tRNA synthetase signature 301 320 5.8E-39 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 Gene3D G3DSA:3.90.740.10 309 544 6.4E-47 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 HMPREF9228_RS03585 52135b7bfa0e8acc6fe2027f0fcf5d59 987 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 233 984 2.1E-204 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 HMPREF9228_RS02310 92aa9db938156ad0b8fe7870d9f232f8 231 Pfam PF09335 SNARE associated Golgi protein 55 183 1.3E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein HMPREF9228_RS02310 92aa9db938156ad0b8fe7870d9f232f8 231 PANTHER PTHR30353:SF13 9 231 3.7E-70 T 22-04-2016 HMPREF9228_RS02310 92aa9db938156ad0b8fe7870d9f232f8 231 PANTHER PTHR30353 9 231 3.7E-70 T 22-04-2016 IPR032818 DedA family HMPREF9228_RS01390 e55445b4a8dfcb32041ff3934bb24ef8 312 SUPERFAMILY SSF75217 65 151 6.54E-11 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS01390 e55445b4a8dfcb32041ff3934bb24ef8 312 PANTHER PTHR12029 64 162 2.8E-17 T 22-04-2016 HMPREF9228_RS01390 e55445b4a8dfcb32041ff3934bb24ef8 312 PANTHER PTHR12029 245 303 2.8E-17 T 22-04-2016 HMPREF9228_RS01390 e55445b4a8dfcb32041ff3934bb24ef8 312 SUPERFAMILY SSF75217 221 308 1.83E-19 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS01390 e55445b4a8dfcb32041ff3934bb24ef8 312 Pfam PF00588 SpoU rRNA Methylase family 217 301 4.3E-13 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 HMPREF9228_RS01390 e55445b4a8dfcb32041ff3934bb24ef8 312 Pfam PF00588 SpoU rRNA Methylase family 87 152 4.4E-5 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 HMPREF9228_RS01390 e55445b4a8dfcb32041ff3934bb24ef8 312 Gene3D G3DSA:3.40.1280.10 65 165 9.5E-40 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS01390 e55445b4a8dfcb32041ff3934bb24ef8 312 Gene3D G3DSA:3.40.1280.10 245 308 9.5E-40 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 Pfam PF00549 CoA-ligase 163 279 8.7E-13 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 297 1.0E-113 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 SUPERFAMILY SSF51735 2 131 3.19E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 PRINTS PR01798 Succinyl-CoA synthase signature 186 204 2.1E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 PRINTS PR01798 Succinyl-CoA synthase signature 249 266 2.1E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 PRINTS PR01798 Succinyl-CoA synthase signature 217 230 2.1E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 PRINTS PR01798 Succinyl-CoA synthase signature 91 108 2.1E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 PANTHER PTHR11117 1 302 4.7E-125 T 22-04-2016 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 SUPERFAMILY SSF52210 132 294 3.79E-41 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 SMART SM00881 3 109 1.8E-21 T 22-04-2016 IPR003781 CoA-binding GO:0048037 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 245 258 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 PANTHER PTHR11117:SF2 1 302 4.7E-125 T 22-04-2016 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 Pfam PF02629 CoA binding domain 7 108 1.0E-25 T 22-04-2016 IPR003781 CoA-binding GO:0048037 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 Gene3D G3DSA:3.40.50.720 2 128 7.4E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 PIRSF PIRSF001553 1 300 1.6E-106 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 HMPREF9228_RS04035 f64c65abd2768923b36533b945e94bdf 303 Gene3D G3DSA:3.40.50.261 129 296 9.8E-61 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 Gene3D G3DSA:1.10.150.20 224 300 1.8E-9 T 22-04-2016 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 Pfam PF11799 impB/mucB/samB family C-terminal domain 305 452 6.4E-11 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 Pfam PF00817 impB/mucB/samB family 16 200 4.6E-25 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 Gene3D G3DSA:3.30.70.270 112 202 7.8E-20 T 22-04-2016 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 SUPERFAMILY SSF56672 119 299 2.49E-45 T 22-04-2016 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 SUPERFAMILY SSF56672 12 85 2.49E-45 T 22-04-2016 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 PANTHER PTHR11076:SF31 119 358 6.8E-44 T 22-04-2016 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 PANTHER PTHR11076:SF31 14 86 6.8E-44 T 22-04-2016 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 PANTHER PTHR11076 119 358 6.8E-44 T 22-04-2016 HMPREF9228_RS06300 4d901cfd8a00fc171022ef95b1b7e495 528 PANTHER PTHR11076 14 86 6.8E-44 T 22-04-2016 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 361 4.3E-130 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 Gene3D G3DSA:1.10.150.300 131 200 9.0E-18 T 22-04-2016 IPR023192 TGS-like domain HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.5E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.5E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.5E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.5E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 SUPERFAMILY SSF52540 3 299 8.54E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 Pfam PF06071 Protein of unknown function (DUF933) 277 360 5.3E-37 T 22-04-2016 IPR013029 Domain of unknown function DUF933 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 362 41.014 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 Gene3D G3DSA:3.40.50.300 201 262 5.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 Gene3D G3DSA:3.40.50.300 3 130 5.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.8E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 PIRSF PIRSF006641 1 362 3.2E-145 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 Gene3D G3DSA:3.10.20.30 263 360 3.2E-44 T 22-04-2016 IPR012675 Beta-grasp domain HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 PANTHER PTHR23305:SF12 1 360 1.5E-171 T 22-04-2016 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 SUPERFAMILY SSF81271 277 359 2.62E-32 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 HMPREF9228_RS04965 aca31c27610961c638bc6dfb14da90a5 366 PANTHER PTHR23305 1 360 1.5E-171 T 22-04-2016 HMPREF9228_RS07890 2bec5dcb48550d3f348b214041f3e402 574 SUPERFAMILY SSF53474 62 303 4.32E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS07890 2bec5dcb48550d3f348b214041f3e402 574 Gene3D G3DSA:3.40.50.1820 68 302 1.0E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04765 a7d7588eb995898c0bc923e4f5ed4353 406 Gene3D G3DSA:1.20.1250.20 255 396 9.7E-4 T 22-04-2016 HMPREF9228_RS04765 a7d7588eb995898c0bc923e4f5ed4353 406 SUPERFAMILY SSF103473 10 394 2.44E-13 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02540 5f6171716f7efbf09bf5ac823de8681e 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 114 1.4E-13 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 HMPREF9228_RS02540 5f6171716f7efbf09bf5ac823de8681e 225 SUPERFAMILY SSF161098 13 207 2.29E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02540 5f6171716f7efbf09bf5ac823de8681e 225 PANTHER PTHR30614:SF7 12 225 7.2E-56 T 22-04-2016 HMPREF9228_RS02540 5f6171716f7efbf09bf5ac823de8681e 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 221 1.8E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02540 5f6171716f7efbf09bf5ac823de8681e 225 PANTHER PTHR30614 12 225 7.2E-56 T 22-04-2016 HMPREF9228_RS02540 5f6171716f7efbf09bf5ac823de8681e 225 Gene3D G3DSA:1.10.3720.10 7 221 8.2E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 SUPERFAMILY SSF51735 6 256 6.77E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.0E-47 T 22-04-2016 HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.7E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.7E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.7E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 Gene3D G3DSA:3.40.50.720 2 256 4.1E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PANTHER PTHR24322 12 139 3.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02790 ac72d6cc442db664073ecf2cfa25a03f 263 PANTHER PTHR24322 155 183 3.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS02130 66f6f480f84c2bb4020eae293a694f53 441 Pfam PF01566 Natural resistance-associated macrophage protein 64 410 5.1E-108 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 HMPREF9228_RS02130 66f6f480f84c2bb4020eae293a694f53 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 123 149 1.4E-22 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 HMPREF9228_RS02130 66f6f480f84c2bb4020eae293a694f53 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 381 400 1.4E-22 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 HMPREF9228_RS02130 66f6f480f84c2bb4020eae293a694f53 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 226 249 1.4E-22 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 HMPREF9228_RS02130 66f6f480f84c2bb4020eae293a694f53 441 PANTHER PTHR11706 13 440 1.3E-149 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 HMPREF9228_RS02130 66f6f480f84c2bb4020eae293a694f53 441 PANTHER PTHR11706:SF42 13 440 1.3E-149 T 22-04-2016 HMPREF9228_RS04490 1d5894fb4c47c43d442d29f0eeaabbae 256 PANTHER PTHR30506:SF3 5 225 5.5E-49 T 22-04-2016 HMPREF9228_RS04490 1d5894fb4c47c43d442d29f0eeaabbae 256 PANTHER PTHR30506 5 225 5.5E-49 T 22-04-2016 HMPREF9228_RS04490 1d5894fb4c47c43d442d29f0eeaabbae 256 Pfam PF03458 UPF0126 domain 13 87 9.9E-15 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 HMPREF9228_RS04490 1d5894fb4c47c43d442d29f0eeaabbae 256 Pfam PF03458 UPF0126 domain 99 173 3.1E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 HMPREF9228_RS03510 4bfbfa6b7c7831575369743a81e3f71e 275 SUPERFAMILY SSF161098 3 275 6.64E-71 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03510 4bfbfa6b7c7831575369743a81e3f71e 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 268 2.1E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03510 4bfbfa6b7c7831575369743a81e3f71e 275 PANTHER PTHR32243 1 275 4.6E-113 T 22-04-2016 HMPREF9228_RS03510 4bfbfa6b7c7831575369743a81e3f71e 275 PANTHER PTHR32243:SF38 1 275 4.6E-113 T 22-04-2016 HMPREF9228_RS03510 4bfbfa6b7c7831575369743a81e3f71e 275 Gene3D G3DSA:1.10.3720.10 3 262 2.1E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 PANTHER PTHR10742:SF279 7 79 1.9E-64 T 22-04-2016 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 PANTHER PTHR10742 7 79 1.9E-64 T 22-04-2016 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 Gene3D G3DSA:3.50.50.60 3 136 3.4E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 Gene3D G3DSA:3.50.50.60 239 356 3.4E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 PANTHER PTHR10742 110 514 1.9E-64 T 22-04-2016 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 PANTHER PTHR10742:SF279 110 514 1.9E-64 T 22-04-2016 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 SUPERFAMILY SSF51971 482 515 5.18E-39 T 22-04-2016 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 SUPERFAMILY SSF51971 110 321 5.18E-39 T 22-04-2016 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 SUPERFAMILY SSF51971 4 79 5.18E-39 T 22-04-2016 HMPREF9228_RS01435 753d45e8db2a7247e26984e382ba146c 537 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 76 4.0E-12 T 22-04-2016 HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 144 157 - T 22-04-2016 IPR033135 ClpP, histidine active site HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 PANTHER PTHR10381 30 226 2.0E-113 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 Pfam PF00574 Clp protease 47 225 1.9E-74 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 35 226 40.164 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 Gene3D G3DSA:3.90.226.10 36 225 9.3E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 PRINTS PR00127 Clp protease catalytic subunit P signature 91 111 6.0E-42 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 PRINTS PR00127 Clp protease catalytic subunit P signature 143 162 6.0E-42 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 PRINTS PR00127 Clp protease catalytic subunit P signature 51 66 6.0E-42 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 PRINTS PR00127 Clp protease catalytic subunit P signature 122 139 6.0E-42 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 PRINTS PR00127 Clp protease catalytic subunit P signature 201 220 6.0E-42 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 SUPERFAMILY SSF52096 43 225 4.03E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 PANTHER PTHR10381:SF7 30 226 2.0E-113 T 22-04-2016 HMPREF9228_RS05100 3a4a2b7e31d7ebf341cd04971652765d 227 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 122 133 - T 22-04-2016 IPR018215 ClpP, Ser active site HMPREF9228_RS02805 603a69cb176fd906c83e2cd8eaf674a1 783 PIRSF PIRSF007663 1 771 6.1E-199 T 22-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 HMPREF9228_RS02805 603a69cb176fd906c83e2cd8eaf674a1 783 SUPERFAMILY SSF48208 284 759 1.45E-60 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 HMPREF9228_RS02805 603a69cb176fd906c83e2cd8eaf674a1 783 PANTHER PTHR31084 1 742 3.1E-196 T 22-04-2016 HMPREF9228_RS02805 603a69cb176fd906c83e2cd8eaf674a1 783 Gene3D G3DSA:2.70.98.50 2 401 1.1E-94 T 22-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 HMPREF9228_RS02805 603a69cb176fd906c83e2cd8eaf674a1 783 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 5 257 3.4E-41 T 22-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 PANTHER PTHR24423 529 612 4.1E-60 T 22-04-2016 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 PANTHER PTHR24423 265 500 4.1E-60 T 22-04-2016 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 Gene3D G3DSA:3.30.565.10 387 421 9.3E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 Gene3D G3DSA:3.30.565.10 459 612 9.3E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 SMART SM00388 332 401 2.0E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 SMART SM00387 465 612 2.6E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 SUPERFAMILY SSF47384 318 401 1.69E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 SMART SM00304 271 324 1.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 611 2.9E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 333 401 1.6E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 Gene3D G3DSA:1.10.287.130 325 386 3.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 SUPERFAMILY SSF55874 536 613 1.56E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 SUPERFAMILY SSF55874 391 500 1.56E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 SUPERFAMILY SSF158472 274 319 9.68E-9 T 22-04-2016 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 590 5.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 551 5.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 609 5.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 565 5.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS02465 8f8b22cca432b0666bf66f1fb014b7ec 641 Pfam PF00672 HAMP domain 252 320 3.3E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 HMPREF9228_RS03690 6deee6b76620469c4b8be7998f35a633 207 SUPERFAMILY SSF51261 74 196 2.04E-14 T 22-04-2016 IPR011055 Duplicated hybrid motif HMPREF9228_RS03690 6deee6b76620469c4b8be7998f35a633 207 PANTHER PTHR21666:SF190 78 196 9.4E-13 T 22-04-2016 HMPREF9228_RS03690 6deee6b76620469c4b8be7998f35a633 207 Gene3D G3DSA:2.70.70.10 72 198 4.3E-23 T 22-04-2016 HMPREF9228_RS03690 6deee6b76620469c4b8be7998f35a633 207 Pfam PF01551 Peptidase family M23 99 192 1.6E-15 T 22-04-2016 IPR016047 Peptidase M23 HMPREF9228_RS03690 6deee6b76620469c4b8be7998f35a633 207 PANTHER PTHR21666 78 196 9.4E-13 T 22-04-2016 HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 Pfam PF00156 Phosphoribosyl transferase domain 283 382 2.7E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 SUPERFAMILY SSF53271 248 464 9.44E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 Pfam PF13537 Glutamine amidotransferase domain 92 210 8.9E-20 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 459 47.388 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 458 4.3E-157 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 Gene3D G3DSA:3.60.20.10 12 255 9.0E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 PIRSF PIRSF000485 8 472 4.5E-175 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 Gene3D G3DSA:3.40.50.2020 269 435 4.1E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 SUPERFAMILY SSF56235 12 254 2.23E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 PANTHER PTHR11907 9 471 7.4E-238 T 22-04-2016 HMPREF9228_RS06305 157e5a34ed2fbd33e802433923b0e9c1 503 PANTHER PTHR11907:SF0 9 471 7.4E-238 T 22-04-2016 HMPREF9228_RS08720 c15a4f421beecfe1dd1b8b07bfeff0c8 75 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 22 69 2.1E-15 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 HMPREF9228_RS08720 c15a4f421beecfe1dd1b8b07bfeff0c8 75 Hamap MF_00422 Protein translocase subunit SecE [secE]. 17 73 11.34 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE HMPREF9228_RS08720 c15a4f421beecfe1dd1b8b07bfeff0c8 75 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 21 74 1.8E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 HMPREF9228_RS08720 c15a4f421beecfe1dd1b8b07bfeff0c8 75 Gene3D G3DSA:1.20.5.1030 17 70 5.9E-14 T 22-04-2016 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 398 423 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Pfam PF00703 Glycosyl hydrolases family 2 241 346 1.6E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Gene3D G3DSA:3.20.20.80 348 637 5.3E-94 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PANTHER PTHR10066:SF72 607 1032 1.9E-247 T 22-04-2016 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PANTHER PTHR10066:SF72 49 589 1.9E-247 T 22-04-2016 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Gene3D G3DSA:2.60.40.320 229 346 1.1E-29 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 SUPERFAMILY SSF49303 241 346 2.88E-18 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PRINTS PR00132 Glycosyl hydrolase family 2 signature 357 371 7.9E-31 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PRINTS PR00132 Glycosyl hydrolase family 2 signature 167 182 7.9E-31 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PRINTS PR00132 Glycosyl hydrolase family 2 signature 545 560 7.9E-31 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PRINTS PR00132 Glycosyl hydrolase family 2 signature 388 406 7.9E-31 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PRINTS PR00132 Glycosyl hydrolase family 2 signature 469 484 7.9E-31 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 SUPERFAMILY SSF74650 755 1041 2.51E-75 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 SMART SM01038 767 1041 6.6E-100 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Gene3D G3DSA:2.60.40.320 639 739 1.6E-13 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PANTHER PTHR10066 607 1032 1.9E-247 T 22-04-2016 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 PANTHER PTHR10066 49 589 1.9E-247 T 22-04-2016 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Pfam PF16353 Domain of unknown function(DUF4981) 649 739 1.8E-11 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 49 239 1.7E-20 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 348 641 1.2E-110 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 SUPERFAMILY SSF49303 634 739 4.53E-17 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Pfam PF02929 Beta galactosidase small chain 774 1040 2.2E-61 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Gene3D G3DSA:2.60.120.260 5 228 1.1E-58 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 Gene3D G3DSA:2.70.98.10 756 1042 3.7E-78 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 SUPERFAMILY SSF51445 348 637 2.21E-81 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00050 a4f4285a46fae70e340dc2827d7d252a 1043 SUPERFAMILY SSF49785 13 239 5.67E-46 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 SUPERFAMILY SSF47413 2 60 1.62E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 SMART SM00354 2 72 1.2E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 Gene3D G3DSA:3.40.50.2300 174 320 6.2E-36 T 22-04-2016 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 Gene3D G3DSA:3.40.50.2300 55 173 6.4E-26 T 22-04-2016 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 PANTHER PTHR30146 1 344 1.7E-73 T 22-04-2016 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.8E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 Gene3D G3DSA:1.10.260.40 3 54 4.2E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 Pfam PF13377 Periplasmic binding protein-like domain 169 344 1.2E-27 T 22-04-2016 HMPREF9228_RS09205 f3ccc5dab4e4a1f440671c35ee51a5f7 348 SUPERFAMILY SSF53822 59 323 7.66E-47 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS09290 256f4cedea9fe705b394dbed567889c9 461 Pfam PF13347 MFS/sugar transport protein 21 428 8.2E-41 T 22-04-2016 HMPREF9228_RS09290 256f4cedea9fe705b394dbed567889c9 461 PANTHER PTHR11328 20 47 1.3E-34 T 22-04-2016 HMPREF9228_RS09290 256f4cedea9fe705b394dbed567889c9 461 PANTHER PTHR11328 66 414 1.3E-34 T 22-04-2016 HMPREF9228_RS09290 256f4cedea9fe705b394dbed567889c9 461 SUPERFAMILY SSF103473 18 453 4.97E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS09290 256f4cedea9fe705b394dbed567889c9 461 PANTHER PTHR11328:SF24 20 47 1.3E-34 T 22-04-2016 HMPREF9228_RS09290 256f4cedea9fe705b394dbed567889c9 461 PANTHER PTHR11328:SF24 66 414 1.3E-34 T 22-04-2016 HMPREF9228_RS09290 256f4cedea9fe705b394dbed567889c9 461 Gene3D G3DSA:1.20.1250.20 18 230 3.2E-6 T 22-04-2016 HMPREF9228_RS09290 256f4cedea9fe705b394dbed567889c9 461 Gene3D G3DSA:1.20.1250.20 265 454 4.1E-11 T 22-04-2016 HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 110 141 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 PANTHER PTHR13794:SF58 1 15 3.7E-95 T 22-04-2016 HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 PANTHER PTHR13794:SF58 51 287 3.7E-95 T 22-04-2016 HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 Pfam PF13378 Enolase C-terminal domain-like 66 282 1.1E-54 T 22-04-2016 IPR029065 Enolase C-terminal domain-like HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 SUPERFAMILY SSF51604 48 289 5.63E-60 T 22-04-2016 IPR029065 Enolase C-terminal domain-like HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 Gene3D G3DSA:3.20.20.120 43 289 3.7E-73 T 22-04-2016 IPR029065 Enolase C-terminal domain-like HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 SMART SM00922 63 160 2.9E-24 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 Gene3D G3DSA:3.30.390.10 2 42 2.1E-13 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 PANTHER PTHR13794 1 15 3.7E-95 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 HMPREF9228_RS02785 0c2118549200172c296432e57eb13da5 291 PANTHER PTHR13794 51 287 3.7E-95 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 PANTHER PTHR30559:SF0 1 354 2.2E-156 T 22-04-2016 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 PANTHER PTHR30559 1 354 2.2E-156 T 22-04-2016 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 Gene3D G3DSA:3.20.20.70 2 353 1.1E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 PIRSF PIRSF001359 5 353 1.5E-61 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 159 170 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 9 353 4.5E-68 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 351 7.9E-114 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 SUPERFAMILY SSF51569 3 353 6.23E-91 T 22-04-2016 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 98 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 HMPREF9228_RS00460 8fb02da07b67f6a3e235f337acb94a3d 355 Pfam PF01116 Fructose-bisphosphate aldolase class-II 8 352 2.5E-78 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 PANTHER PTHR30126 1 228 1.8E-40 T 22-04-2016 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 Pfam PF03466 LysR substrate binding domain 86 268 8.7E-17 T 22-04-2016 IPR005119 LysR, substrate-binding HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 Gene3D G3DSA:1.10.10.10 4 87 3.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 SUPERFAMILY SSF53850 87 270 2.99E-16 T 22-04-2016 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 7.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 PANTHER PTHR30126:SF11 1 228 1.8E-40 T 22-04-2016 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 4.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 4.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 4.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 Gene3D G3DSA:3.40.190.10 184 232 2.6E-6 T 22-04-2016 HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 SUPERFAMILY SSF46785 4 109 1.19E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06175 2b6193523bbb892fc5bdae590c758404 271 Gene3D G3DSA:3.40.190.10 88 183 7.9E-8 T 22-04-2016 HMPREF9228_RS03455 29a9d50d6407e8bceb192682942f357f 158 Pfam PF00692 dUTPase 29 155 1.0E-27 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 HMPREF9228_RS03455 29a9d50d6407e8bceb192682942f357f 158 TIGRFAM TIGR00576 dut: dUTP diphosphatase 29 155 2.0E-44 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 HMPREF9228_RS03455 29a9d50d6407e8bceb192682942f357f 158 SUPERFAMILY SSF51283 14 156 4.71E-44 T 22-04-2016 IPR029054 dUTPase-like HMPREF9228_RS03455 29a9d50d6407e8bceb192682942f357f 158 Gene3D G3DSA:2.70.40.10 7 156 3.9E-51 T 22-04-2016 IPR029054 dUTPase-like HMPREF9228_RS03455 29a9d50d6407e8bceb192682942f357f 158 PANTHER PTHR11241 9 156 4.1E-41 T 22-04-2016 HMPREF9228_RS03455 29a9d50d6407e8bceb192682942f357f 158 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 13 156 30.552 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 HMPREF9228_RS03455 29a9d50d6407e8bceb192682942f357f 158 PANTHER PTHR11241:SF0 9 156 4.1E-41 T 22-04-2016 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 Gene3D G3DSA:3.30.870.10 363 545 1.2E-78 T 22-04-2016 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 Hamap MF_00347 Polyphosphate kinase [ppk]. 41 737 33.14 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 SUPERFAMILY SSF143724 147 352 1.73E-61 T 22-04-2016 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 PANTHER PTHR30218 41 740 0.0 T 22-04-2016 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 Pfam PF02503 Polyphosphate kinase middle domain 159 360 7.2E-64 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 SUPERFAMILY SSF56024 371 540 1.1E-56 T 22-04-2016 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 SUPERFAMILY SSF56024 546 737 1.7E-63 T 22-04-2016 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 Gene3D G3DSA:3.30.870.10 546 739 2.0E-68 T 22-04-2016 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 Pfam PF13090 Polyphosphate kinase C-terminal domain 375 734 8.4E-153 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 Gene3D G3DSA:3.30.1840.10 146 341 2.9E-70 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 SUPERFAMILY SSF140356 41 145 4.97E-36 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 PANTHER PTHR30218:SF0 41 740 0.0 T 22-04-2016 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 PIRSF PIRSF015589 22 745 1.1E-272 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 43 735 3.7E-252 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 HMPREF9228_RS08935 506b9752233b7447f52048b86bd026b7 745 Pfam PF13089 Polyphosphate kinase N-terminal domain 44 149 1.2E-36 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 Gene3D G3DSA:1.10.357.10 4 187 1.2E-42 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 2.7E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 6.0E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 6.0E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 PANTHER PTHR30328 1 196 1.5E-56 T 22-04-2016 HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 PANTHER PTHR30328:SF12 1 196 1.5E-56 T 22-04-2016 HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 SUPERFAMILY SSF48498 78 188 3.11E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site HMPREF9228_RS01210 84a6e3d62b8437f367342bcb0d47e9bc 276 SUPERFAMILY SSF46689 4 75 1.08E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS00575 76dc104d1223eb216cbe9653db92b2e5 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 284 1.1E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00575 76dc104d1223eb216cbe9653db92b2e5 293 PANTHER PTHR32243 11 293 1.2E-75 T 22-04-2016 HMPREF9228_RS00575 76dc104d1223eb216cbe9653db92b2e5 293 PANTHER PTHR32243:SF4 11 293 1.2E-75 T 22-04-2016 HMPREF9228_RS00575 76dc104d1223eb216cbe9653db92b2e5 293 SUPERFAMILY SSF161098 15 292 1.13E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00575 76dc104d1223eb216cbe9653db92b2e5 293 Gene3D G3DSA:1.10.3720.10 12 281 8.9E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03305 4a6abfaf2bb99b6ddd1cdbecaa92af2c 246 Gene3D G3DSA:3.30.460.10 37 181 8.6E-39 T 22-04-2016 HMPREF9228_RS03305 4a6abfaf2bb99b6ddd1cdbecaa92af2c 246 SUPERFAMILY SSF81301 39 234 1.96E-53 T 22-04-2016 HMPREF9228_RS03305 4a6abfaf2bb99b6ddd1cdbecaa92af2c 246 Gene3D G3DSA:1.10.287.860 184 235 4.5E-12 T 22-04-2016 HMPREF9228_RS03305 4a6abfaf2bb99b6ddd1cdbecaa92af2c 246 SMART SM00954 78 201 2.9E-43 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 HMPREF9228_RS03305 4a6abfaf2bb99b6ddd1cdbecaa92af2c 246 PANTHER PTHR21262 41 236 8.2E-40 T 22-04-2016 HMPREF9228_RS03305 4a6abfaf2bb99b6ddd1cdbecaa92af2c 246 Pfam PF04607 Region found in RelA / SpoT proteins 78 197 1.9E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 HMPREF9228_RS01025 302ea33d9c973e2e57031b7af6be1227 153 Pfam PF13460 NAD(P)H-binding 10 109 6.5E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01025 302ea33d9c973e2e57031b7af6be1227 153 SUPERFAMILY SSF51735 2 122 1.48E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS01025 302ea33d9c973e2e57031b7af6be1227 153 Gene3D G3DSA:3.40.50.720 2 108 4.6E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS07225 8a19a5185a9ecf18cbc5712f6d93147d 94 PIRSF PIRSF006488 7 94 6.6E-25 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 HMPREF9228_RS07225 8a19a5185a9ecf18cbc5712f6d93147d 94 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 24 78 1.8E-16 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 HMPREF9228_RS07225 8a19a5185a9ecf18cbc5712f6d93147d 94 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 24 63 4.0E-16 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 HMPREF9228_RS07225 8a19a5185a9ecf18cbc5712f6d93147d 94 Pfam PF02609 Exonuclease VII small subunit 24 74 6.4E-13 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 HMPREF9228_RS07225 8a19a5185a9ecf18cbc5712f6d93147d 94 Gene3D G3DSA:1.10.287.1040 19 83 2.7E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 HMPREF9228_RS07225 8a19a5185a9ecf18cbc5712f6d93147d 94 SUPERFAMILY SSF116842 19 79 1.83E-13 T 22-04-2016 HMPREF9228_RS07225 8a19a5185a9ecf18cbc5712f6d93147d 94 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 23 83 11.057 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 HMPREF9228_RS09140 8d673c8f8cd7fad5bc0f997ea4fa2847 394 PANTHER PTHR24220 226 369 8.3E-20 T 22-04-2016 HMPREF9228_RS09140 8d673c8f8cd7fad5bc0f997ea4fa2847 394 Pfam PF00005 ABC transporter 226 347 4.9E-12 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09140 8d673c8f8cd7fad5bc0f997ea4fa2847 394 Gene3D G3DSA:3.40.50.300 226 391 4.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09140 8d673c8f8cd7fad5bc0f997ea4fa2847 394 SUPERFAMILY SSF52540 226 392 1.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 Gene3D G3DSA:3.40.50.1820 218 340 1.6E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 Gene3D G3DSA:3.40.50.1820 16 163 1.6E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 SUPERFAMILY SSF53474 29 163 4.13E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 SUPERFAMILY SSF53474 218 347 4.13E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 42 292 6.1E-35 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 PANTHER PTHR11731 225 329 2.9E-14 T 22-04-2016 HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 PANTHER PTHR11731 41 180 2.9E-14 T 22-04-2016 HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 SUPERFAMILY SSF49785 341 557 1.32E-54 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 PANTHER PTHR11731:SF151 225 329 2.9E-14 T 22-04-2016 HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 PANTHER PTHR11731:SF151 41 180 2.9E-14 T 22-04-2016 HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 SMART SM00939 314 553 2.7E-45 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 330 552 9.8E-32 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 38 556 5.2E-86 T 22-04-2016 IPR005674 CocE/Serine esterase GO:0016787 HMPREF9228_RS07150 d6192aed6d769c7f5ba55cff8a3280be 558 Gene3D G3DSA:2.60.120.260 341 557 7.6E-59 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 PANTHER PTHR32125 1 86 1.1E-72 T 22-04-2016 HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 PANTHER PTHR32125 165 288 1.1E-72 T 22-04-2016 HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 Gene3D G3DSA:1.10.1270.20 219 308 9.3E-27 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 Gene3D G3DSA:3.40.1280.10 134 218 8.5E-66 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 Gene3D G3DSA:3.40.1280.10 1 79 8.5E-66 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 SUPERFAMILY SSF75217 1 79 9.59E-24 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 PANTHER PTHR32125:SF1 1 86 1.1E-72 T 22-04-2016 HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 PANTHER PTHR32125:SF1 165 288 1.1E-72 T 22-04-2016 HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 132 281 2.4E-34 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 21 73 4.4E-13 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 316 80.312 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 HMPREF9228_RS08580 9666cbe591b17017119235124ac20b8e 316 SUPERFAMILY SSF75217 133 294 1.48E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 3.0E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 3.0E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 3.0E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 78 1.4E-34 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 PANTHER PTHR10744:SF1 3 85 2.5E-35 T 22-04-2016 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 PANTHER PTHR10744 3 85 2.5E-35 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 76 2.0E-34 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 24.488 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 59 71 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 Gene3D G3DSA:2.40.50.140 8 85 3.0E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 SUPERFAMILY SSF50249 8 85 1.11E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08150 b1c9f08e0735f423dd5bd0900f4d793d 86 Pfam PF00366 Ribosomal protein S17 13 78 3.7E-30 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01765 712d749886b65c30f0fb439a91edd658 232 PANTHER PTHR32468 59 213 3.7E-13 T 22-04-2016 HMPREF9228_RS01765 712d749886b65c30f0fb439a91edd658 232 Pfam PF00999 Sodium/hydrogen exchanger family 72 212 2.6E-15 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 HMPREF9228_RS01765 712d749886b65c30f0fb439a91edd658 232 PANTHER PTHR32468:SF9 59 213 3.7E-13 T 22-04-2016 HMPREF9228_RS02995 f5afa424c3381679d74b45aa3f60b5fa 304 Pfam PF00480 ROK family 11 302 2.4E-55 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS02995 f5afa424c3381679d74b45aa3f60b5fa 304 Gene3D G3DSA:3.30.420.40 9 146 6.7E-34 T 22-04-2016 HMPREF9228_RS02995 f5afa424c3381679d74b45aa3f60b5fa 304 PANTHER PTHR18964:SF123 11 304 4.3E-51 T 22-04-2016 HMPREF9228_RS02995 f5afa424c3381679d74b45aa3f60b5fa 304 PANTHER PTHR18964 11 304 4.3E-51 T 22-04-2016 HMPREF9228_RS02995 f5afa424c3381679d74b45aa3f60b5fa 304 SUPERFAMILY SSF53067 11 304 5.19E-49 T 22-04-2016 HMPREF9228_RS02995 f5afa424c3381679d74b45aa3f60b5fa 304 Gene3D G3DSA:3.30.420.40 147 270 7.0E-38 T 22-04-2016 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 1.2E-109 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 3 379 2.0E-158 T 22-04-2016 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77|UniPathway: UPA00563 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 Gene3D G3DSA:1.20.1090.10 186 383 5.9E-61 T 22-04-2016 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 SUPERFAMILY SSF56796 5 380 3.53E-114 T 22-04-2016 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 Gene3D G3DSA:3.40.50.1970 5 185 1.2E-57 T 22-04-2016 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 PANTHER PTHR11496 1 383 2.8E-155 T 22-04-2016 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 PANTHER PTHR11496:SF77 1 383 2.8E-155 T 22-04-2016 HMPREF9228_RS07530 0f733a769db18c61cdac6f50c645fd4e 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 Pfam PF00271 Helicase conserved C-terminal domain 274 372 1.4E-23 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 Gene3D G3DSA:3.40.50.300 247 406 2.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 SMART SM00487 29 257 3.1E-45 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 PANTHER PTHR24031 109 595 7.8E-140 T 22-04-2016 HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 PANTHER PTHR24031 11 87 7.8E-140 T 22-04-2016 HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 PANTHER PTHR24031:SF334 109 595 7.8E-140 T 22-04-2016 HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 PANTHER PTHR24031:SF334 11 87 7.8E-140 T 22-04-2016 HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 SUPERFAMILY SSF52540 109 393 2.0E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 SMART SM00490 291 372 1.9E-29 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 Gene3D G3DSA:3.40.50.300 9 246 7.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04840 a46d5b36e3688b849d20ed9fc681004f 659 Pfam PF00270 DEAD/DEAH box helicase 34 230 5.1E-43 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 Gene3D G3DSA:3.90.400.10 111 182 8.1E-28 T 22-04-2016 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 SMART SM00642 18 429 1.3E-112 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 Pfam PF00128 Alpha amylase, catalytic domain 33 403 5.3E-76 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 PANTHER PTHR10357 514 586 1.6E-143 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 PANTHER PTHR10357 9 438 1.6E-143 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 SUPERFAMILY SSF51445 9 440 3.58E-111 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 Gene3D G3DSA:3.20.20.80 11 110 1.4E-111 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 Gene3D G3DSA:3.20.20.80 187 448 1.4E-111 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 Gene3D G3DSA:3.20.20.80 517 531 1.4E-111 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 PANTHER PTHR10357:SF11 514 586 1.6E-143 T 22-04-2016 HMPREF9228_RS00530 554cd8590523fcadc9e5b93cfe342548 604 PANTHER PTHR10357:SF11 9 438 1.6E-143 T 22-04-2016 HMPREF9228_RS04845 999d52288a7a5d284a4fa0e6b4b868ff 429 PANTHER PTHR11119 20 408 2.9E-128 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS04845 999d52288a7a5d284a4fa0e6b4b868ff 429 PANTHER PTHR11119:SF49 20 408 2.9E-128 T 22-04-2016 HMPREF9228_RS04845 999d52288a7a5d284a4fa0e6b4b868ff 429 Pfam PF00860 Permease family 36 386 3.1E-71 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS04845 999d52288a7a5d284a4fa0e6b4b868ff 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 405 2.2E-89 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 630 38.034 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 SUPERFAMILY SSF53697 261 630 2.6E-97 T 22-04-2016 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 SUPERFAMILY SSF56235 2 247 2.32E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 Gene3D G3DSA:3.40.50.10490 260 458 2.0E-65 T 22-04-2016 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 PANTHER PTHR10937 1 630 1.2E-279 T 22-04-2016 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 Gene3D G3DSA:3.60.20.10 2 248 1.4E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 Pfam PF01380 SIS domain 310 431 3.3E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 Pfam PF01380 SIS domain 480 610 1.2E-18 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 Pfam PF13522 Glutamine amidotransferase domain 74 199 1.6E-19 T 22-04-2016 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 PANTHER PTHR10937:SF0 1 630 1.2E-279 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 Gene3D G3DSA:3.40.50.10490 459 630 1.5E-54 T 22-04-2016 HMPREF9228_RS06645 b2f0f1571c3e43b2a0144a5104474c8a 630 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 630 1.8E-220 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 316 9.4E-94 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 SUPERFAMILY SSF53067 6 316 9.07E-35 T 22-04-2016 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 PANTHER PTHR11735:SF6 6 326 1.0E-116 T 22-04-2016 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 322 2.8E-119 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 Pfam PF00814 Glycoprotease family 25 316 3.3E-91 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 PANTHER PTHR11735 6 326 1.0E-116 T 22-04-2016 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 6.2E-47 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 273 282 6.2E-47 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 6.2E-47 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 6.2E-47 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 78 98 6.2E-47 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 99 118 6.2E-47 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 342 61.382 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03620 2eddf5eabca3bf464499cee65cb2587c 347 Gene3D G3DSA:3.30.420.40 6 158 3.2E-41 T 22-04-2016 HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 Gene3D G3DSA:2.40.50.140 3 74 2.3E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 Pfam PF01938 TRAM domain 4 42 9.7E-6 T 22-04-2016 IPR002792 TRAM domain HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 350 381 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 PANTHER PTHR11061:SF30 4 419 1.1E-60 T 22-04-2016 HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 SUPERFAMILY SSF50249 3 62 9.42E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 221 415 5.1E-16 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 PANTHER PTHR11061 4 419 1.1E-60 T 22-04-2016 HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 Gene3D G3DSA:3.40.50.150 226 419 2.7E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS03265 7ad38fa24f3e14e8367cba62ae8f92b2 419 SUPERFAMILY SSF53335 80 418 3.38E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS01510 e773a6d4ac58a37f98ef5ed87caa4609 511 Gene3D G3DSA:3.40.190.10 203 302 1.7E-23 T 22-04-2016 HMPREF9228_RS01510 e773a6d4ac58a37f98ef5ed87caa4609 511 SUPERFAMILY SSF53850 53 500 3.62E-74 T 22-04-2016 HMPREF9228_RS01510 e773a6d4ac58a37f98ef5ed87caa4609 511 Gene3D G3DSA:3.90.76.10 60 202 2.1E-32 T 22-04-2016 HMPREF9228_RS01510 e773a6d4ac58a37f98ef5ed87caa4609 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 423 1.5E-49 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain HMPREF9228_RS01510 e773a6d4ac58a37f98ef5ed87caa4609 511 Gene3D G3DSA:3.10.105.10 303 480 2.0E-16 T 22-04-2016 HMPREF9228_RS01510 e773a6d4ac58a37f98ef5ed87caa4609 511 PIRSF PIRSF002741 44 503 1.8E-51 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 HMPREF9228_RS01510 e773a6d4ac58a37f98ef5ed87caa4609 511 PANTHER PTHR30290 3 495 7.3E-61 T 22-04-2016 HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 PANTHER PTHR10381 14 187 7.2E-93 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 PANTHER PTHR10381:SF22 14 187 7.2E-93 T 22-04-2016 HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 Gene3D G3DSA:3.90.226.10 14 188 3.2E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 SUPERFAMILY SSF52096 13 189 1.64E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 Pfam PF00574 Clp protease 14 186 6.0E-71 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 PRINTS PR00127 Clp protease catalytic subunit P signature 162 181 1.8E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 PRINTS PR00127 Clp protease catalytic subunit P signature 84 101 1.8E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 PRINTS PR00127 Clp protease catalytic subunit P signature 13 28 1.8E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 PRINTS PR00127 Clp protease catalytic subunit P signature 53 73 1.8E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 PRINTS PR00127 Clp protease catalytic subunit P signature 105 124 1.8E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS05105 d9758fa1b293282bf488a5cbe543b10a 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 187 37.045 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 HMPREF9228_RS08430 1c1665176bed80076738680a952fc5c3 173 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08430 1c1665176bed80076738680a952fc5c3 173 Pfam PF00466 Ribosomal protein L10 1 98 5.2E-27 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 HMPREF9228_RS08430 1c1665176bed80076738680a952fc5c3 173 SUPERFAMILY SSF160369 1 169 8.37E-51 T 22-04-2016 HMPREF9228_RS08430 1c1665176bed80076738680a952fc5c3 173 PANTHER PTHR11560 3 173 2.8E-46 T 22-04-2016 HMPREF9228_RS08430 1c1665176bed80076738680a952fc5c3 173 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 72 159 0.002 T 22-04-2016 HMPREF9228_RS08430 1c1665176bed80076738680a952fc5c3 173 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 23.656 T 22-04-2016 IPR022973 Ribosomal protein L10 HMPREF9228_RS05520 8afad6bad4904fb004914479be20ee49 404 Gene3D G3DSA:3.20.20.300 79 403 2.3E-61 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS05520 8afad6bad4904fb004914479be20ee49 404 SUPERFAMILY SSF51445 78 403 1.05E-53 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS05520 8afad6bad4904fb004914479be20ee49 404 PANTHER PTHR30480 58 404 2.3E-46 T 22-04-2016 HMPREF9228_RS05520 8afad6bad4904fb004914479be20ee49 404 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 74 396 7.4E-41 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS01720 057dfc343d3a50a012bcb831bbbe63ba 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 297 2.5E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01720 057dfc343d3a50a012bcb831bbbe63ba 303 PANTHER PTHR30193 8 302 2.0E-63 T 22-04-2016 HMPREF9228_RS01720 057dfc343d3a50a012bcb831bbbe63ba 303 SUPERFAMILY SSF161098 63 290 1.13E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01720 057dfc343d3a50a012bcb831bbbe63ba 303 Gene3D G3DSA:1.10.3720.10 70 297 2.9E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01720 057dfc343d3a50a012bcb831bbbe63ba 303 PANTHER PTHR30193:SF6 8 302 2.0E-63 T 22-04-2016 HMPREF9228_RS08055 3d73923acb79f191d287a0cf51b5ad28 726 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 482 641 1.7E-17 T 22-04-2016 IPR007296 Domain of unknown function DUF403 HMPREF9228_RS08055 3d73923acb79f191d287a0cf51b5ad28 726 SUPERFAMILY SSF56059 30 188 5.92E-40 T 22-04-2016 HMPREF9228_RS08055 3d73923acb79f191d287a0cf51b5ad28 726 SUPERFAMILY SSF56059 292 439 5.92E-40 T 22-04-2016 HMPREF9228_RS08055 3d73923acb79f191d287a0cf51b5ad28 726 Pfam PF04174 A circularly permuted ATPgrasp 50 378 7.5E-142 T 22-04-2016 IPR007302 Circularly permuted ATPgrasp domain HMPREF9228_RS08055 3d73923acb79f191d287a0cf51b5ad28 726 PANTHER PTHR34595 12 722 3.5E-169 T 22-04-2016 HMPREF9228_RS08055 3d73923acb79f191d287a0cf51b5ad28 726 PANTHER PTHR34595:SF3 12 722 3.5E-169 T 22-04-2016 HMPREF9228_RS06090 6610fdbf093cd0e7f5d948900fe5ca5b 272 PANTHER PTHR24220 5 263 1.4E-102 T 22-04-2016 HMPREF9228_RS06090 6610fdbf093cd0e7f5d948900fe5ca5b 272 Gene3D G3DSA:3.40.50.300 2 255 9.6E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06090 6610fdbf093cd0e7f5d948900fe5ca5b 272 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS06090 6610fdbf093cd0e7f5d948900fe5ca5b 272 Pfam PF00005 ABC transporter 29 181 6.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS06090 6610fdbf093cd0e7f5d948900fe5ca5b 272 SUPERFAMILY SSF52540 4 253 1.18E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06090 6610fdbf093cd0e7f5d948900fe5ca5b 272 SMART SM00382 36 231 3.0E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06090 6610fdbf093cd0e7f5d948900fe5ca5b 272 PANTHER PTHR24220:SF81 5 263 1.4E-102 T 22-04-2016 HMPREF9228_RS08310 ddbd4133a77985e5d36357f91514a165 431 PANTHER PTHR30061 1 427 2.7E-70 T 22-04-2016 HMPREF9228_RS08310 ddbd4133a77985e5d36357f91514a165 431 Gene3D G3DSA:3.40.190.10 168 365 7.1E-47 T 22-04-2016 HMPREF9228_RS08310 ddbd4133a77985e5d36357f91514a165 431 SUPERFAMILY SSF53850 49 425 1.04E-78 T 22-04-2016 HMPREF9228_RS08310 ddbd4133a77985e5d36357f91514a165 431 Pfam PF13416 Bacterial extracellular solute-binding protein 65 370 1.6E-40 T 22-04-2016 HMPREF9228_RS08310 ddbd4133a77985e5d36357f91514a165 431 Gene3D G3DSA:3.40.190.10 48 167 1.4E-22 T 22-04-2016 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 Gene3D G3DSA:3.90.70.10 56 241 9.9E-163 T 22-04-2016 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 Gene3D G3DSA:3.90.70.10 293 495 9.9E-163 T 22-04-2016 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 69 80 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 PANTHER PTHR10363 10 240 2.2E-133 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 PANTHER PTHR10363 292 497 2.2E-133 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 PIRSF PIRSF005700 6 499 3.6E-146 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 Pfam PF03051 Peptidase C1-like family 10 241 3.4E-75 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 Pfam PF03051 Peptidase C1-like family 295 495 1.2E-65 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 SUPERFAMILY SSF54001 16 241 9.15E-111 T 22-04-2016 HMPREF9228_RS09260 398ea6211173ae33b514e12906b966b5 500 SUPERFAMILY SSF54001 292 495 9.15E-111 T 22-04-2016 HMPREF9228_RS09250 0d6f56e0973cc9ef25a65d664e7ca1ef 316 PANTHER PTHR30465:SF2 25 311 1.9E-72 T 22-04-2016 HMPREF9228_RS09250 0d6f56e0973cc9ef25a65d664e7ca1ef 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 307 3.4E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09250 0d6f56e0973cc9ef25a65d664e7ca1ef 316 Gene3D G3DSA:1.10.3720.10 101 307 2.7E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09250 0d6f56e0973cc9ef25a65d664e7ca1ef 316 PANTHER PTHR30465 25 311 1.9E-72 T 22-04-2016 HMPREF9228_RS09250 0d6f56e0973cc9ef25a65d664e7ca1ef 316 SUPERFAMILY SSF161098 102 292 3.01E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09250 0d6f56e0973cc9ef25a65d664e7ca1ef 316 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 35 76 5.4E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain HMPREF9228_RS08865 0fbbd98f80daea45b7df5b3115180699 418 SUPERFAMILY SSF103473 13 413 7.19E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS08865 0fbbd98f80daea45b7df5b3115180699 418 PANTHER PTHR23513 1 410 2.5E-65 T 22-04-2016 HMPREF9228_RS08865 0fbbd98f80daea45b7df5b3115180699 418 Pfam PF07690 Major Facilitator Superfamily 23 372 2.6E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS08865 0fbbd98f80daea45b7df5b3115180699 418 PANTHER PTHR23513:SF4 1 410 2.5E-65 T 22-04-2016 HMPREF9228_RS08865 0fbbd98f80daea45b7df5b3115180699 418 Gene3D G3DSA:1.20.1250.20 228 412 9.3E-8 T 22-04-2016 HMPREF9228_RS08865 0fbbd98f80daea45b7df5b3115180699 418 Gene3D G3DSA:1.20.1250.20 14 204 4.4E-14 T 22-04-2016 HMPREF9228_RS02980 1a04767529f27f4a598ea8167f8af2aa 262 SUPERFAMILY SSF103473 60 245 2.35E-16 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02980 1a04767529f27f4a598ea8167f8af2aa 262 PANTHER PTHR23514 68 253 1.1E-12 T 22-04-2016 HMPREF9228_RS02980 1a04767529f27f4a598ea8167f8af2aa 262 Gene3D G3DSA:1.20.1250.20 69 245 7.5E-12 T 22-04-2016 HMPREF9228_RS02980 1a04767529f27f4a598ea8167f8af2aa 262 Pfam PF07690 Major Facilitator Superfamily 73 243 2.0E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS08145 4fc8d3555d53f24701cac35db2191719 122 Gene3D G3DSA:2.40.150.20 1 122 6.2E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08145 4fc8d3555d53f24701cac35db2191719 122 SUPERFAMILY SSF50193 1 122 2.62E-49 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08145 4fc8d3555d53f24701cac35db2191719 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.2E-55 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08145 4fc8d3555d53f24701cac35db2191719 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.7E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08145 4fc8d3555d53f24701cac35db2191719 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site HMPREF9228_RS08145 4fc8d3555d53f24701cac35db2191719 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.411 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08145 4fc8d3555d53f24701cac35db2191719 122 SMART SM01374 1 122 4.9E-83 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08145 4fc8d3555d53f24701cac35db2191719 122 PANTHER PTHR11761 1 122 4.0E-71 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS05170 7dcce4c0dd621591eaece3e4059ca2a9 326 Gene3D G3DSA:3.40.190.10 65 190 3.0E-43 T 22-04-2016 HMPREF9228_RS05170 7dcce4c0dd621591eaece3e4059ca2a9 326 PANTHER PTHR30429:SF1 24 305 9.3E-70 T 22-04-2016 HMPREF9228_RS05170 7dcce4c0dd621591eaece3e4059ca2a9 326 SUPERFAMILY SSF53850 65 304 1.86E-65 T 22-04-2016 HMPREF9228_RS05170 7dcce4c0dd621591eaece3e4059ca2a9 326 PANTHER PTHR30429 24 305 9.3E-70 T 22-04-2016 IPR004872 Lipoprotein NlpA family HMPREF9228_RS05170 7dcce4c0dd621591eaece3e4059ca2a9 326 Pfam PF03180 NLPA lipoprotein 65 301 1.2E-63 T 22-04-2016 IPR004872 Lipoprotein NlpA family HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 SUPERFAMILY SSF53383 136 426 6.51E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 SUPERFAMILY SSF53383 14 98 6.51E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 Gene3D G3DSA:3.90.1150.10 298 423 2.9E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 PANTHER PTHR11601:SF20 15 96 4.9E-123 T 22-04-2016 HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 PANTHER PTHR11601:SF20 134 425 4.9E-123 T 22-04-2016 HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 Pfam PF00266 Aminotransferase class-V 15 93 1.2E-15 T 22-04-2016 IPR000192 Aminotransferase class V domain HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 Pfam PF00266 Aminotransferase class-V 134 417 4.6E-46 T 22-04-2016 IPR000192 Aminotransferase class V domain HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 245 264 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 Gene3D G3DSA:3.40.640.10 26 94 2.1E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 Gene3D G3DSA:3.40.640.10 135 297 2.1E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 PANTHER PTHR11601 15 96 4.9E-123 T 22-04-2016 HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 PANTHER PTHR11601 134 425 4.9E-123 T 22-04-2016 HMPREF9228_RS03165 72655bf7b4076de63a060da67695f758 432 PIRSF PIRSF005572 12 431 2.2E-107 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 HMPREF9228_RS01990 c80abcfff8c0a16606ae0b9353dae41d 142 PANTHER PTHR30204 1 116 2.1E-23 T 22-04-2016 HMPREF9228_RS01990 c80abcfff8c0a16606ae0b9353dae41d 142 Gene3D G3DSA:1.10.1660.10 3 116 8.5E-30 T 22-04-2016 HMPREF9228_RS01990 c80abcfff8c0a16606ae0b9353dae41d 142 SUPERFAMILY SSF46955 3 117 8.42E-27 T 22-04-2016 IPR009061 Putative DNA-binding domain HMPREF9228_RS01990 c80abcfff8c0a16606ae0b9353dae41d 142 SMART SM00422 3 72 7.3E-15 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS01990 c80abcfff8c0a16606ae0b9353dae41d 142 PANTHER PTHR30204:SF25 1 116 2.1E-23 T 22-04-2016 HMPREF9228_RS01990 c80abcfff8c0a16606ae0b9353dae41d 142 Pfam PF13411 MerR HTH family regulatory protein 3 69 4.1E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 Gene3D G3DSA:3.40.1190.10 248 311 2.0E-42 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 Gene3D G3DSA:3.40.1190.10 38 193 2.0E-42 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 Pfam PF08353 Domain of unknown function (DUF1727) 350 455 1.3E-28 T 22-04-2016 IPR013564 Domain of unknown function DUF1727 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 PANTHER PTHR23135:SF7 312 471 7.1E-79 T 22-04-2016 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 PANTHER PTHR23135:SF7 5 208 7.1E-79 T 22-04-2016 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 PANTHER PTHR23135:SF7 265 294 7.1E-79 T 22-04-2016 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 SUPERFAMILY SSF53623 48 191 3.66E-35 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 SUPERFAMILY SSF53623 245 311 3.66E-35 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 50 73 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 PANTHER PTHR23135 312 471 7.1E-79 T 22-04-2016 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 PANTHER PTHR23135 5 208 7.1E-79 T 22-04-2016 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 PANTHER PTHR23135 265 294 7.1E-79 T 22-04-2016 HMPREF9228_RS01245 7ff6b24e7ba6b6203aed959ffc27ac8f 475 Pfam PF08245 Mur ligase middle domain 52 194 1.1E-16 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS04315 fc1a5fcf61974ed5feafaa327adad3a1 284 Gene3D G3DSA:3.20.20.220 3 275 2.6E-90 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like HMPREF9228_RS04315 fc1a5fcf61974ed5feafaa327adad3a1 284 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 5.7E-74 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 HMPREF9228_RS04315 fc1a5fcf61974ed5feafaa327adad3a1 284 PANTHER PTHR21091 134 274 1.9E-29 T 22-04-2016 HMPREF9228_RS04315 fc1a5fcf61974ed5feafaa327adad3a1 284 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 275 1.4E-97 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 HMPREF9228_RS04315 fc1a5fcf61974ed5feafaa327adad3a1 284 SUPERFAMILY SSF51730 3 275 3.73E-81 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like HMPREF9228_RS04315 fc1a5fcf61974ed5feafaa327adad3a1 284 PANTHER PTHR21091:SF31 134 274 1.9E-29 T 22-04-2016 HMPREF9228_RS02730 7aed4b458c80d9a185328b030047ed62 449 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 4 38 3.1E-14 T 22-04-2016 IPR019933 DivIVA domain HMPREF9228_RS02730 7aed4b458c80d9a185328b030047ed62 449 Pfam PF05103 DivIVA protein 4 135 1.6E-9 T 22-04-2016 IPR007793 DivIVA family HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 SUPERFAMILY SSF56176 4 204 2.57E-34 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 PANTHER PTHR21071:SF6 189 241 6.6E-85 T 22-04-2016 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 PANTHER PTHR21071:SF6 287 405 6.6E-85 T 22-04-2016 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 PANTHER PTHR21071:SF6 3 173 6.6E-85 T 22-04-2016 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 407 62.339 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 293 404 1.7E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 Gene3D G3DSA:3.30.43.10 3 64 1.6E-18 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 Gene3D G3DSA:3.90.78.10 301 406 5.1E-41 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 Pfam PF01565 FAD binding domain 17 152 4.4E-19 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 SUPERFAMILY SSF56194 291 406 1.96E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 PANTHER PTHR21071 189 241 6.6E-85 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 PANTHER PTHR21071 287 405 6.6E-85 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 PANTHER PTHR21071 3 173 6.6E-85 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 Gene3D G3DSA:3.30.465.10 283 300 8.0E-51 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 HMPREF9228_RS08355 6d20aa030c70108ae56914428d29ecd0 407 Gene3D G3DSA:3.30.465.10 83 208 8.0E-51 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 HMPREF9228_RS02425 360f77ef92e3a6a87d683da1ad911264 359 PANTHER PTHR11603:SF148 34 359 8.4E-114 T 22-04-2016 HMPREF9228_RS02425 360f77ef92e3a6a87d683da1ad911264 359 PANTHER PTHR11603 34 359 8.4E-114 T 22-04-2016 HMPREF9228_RS02425 360f77ef92e3a6a87d683da1ad911264 359 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 73 203 4.1E-57 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 HMPREF9228_RS02425 360f77ef92e3a6a87d683da1ad911264 359 Gene3D G3DSA:3.40.50.300 55 219 7.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02425 360f77ef92e3a6a87d683da1ad911264 359 SUPERFAMILY SSF52540 40 332 1.11E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02425 360f77ef92e3a6a87d683da1ad911264 359 Gene3D G3DSA:1.10.8.300 240 356 3.5E-37 T 22-04-2016 HMPREF9228_RS02425 360f77ef92e3a6a87d683da1ad911264 359 PIRSF PIRSF002849 14 359 2.0E-119 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 SUPERFAMILY SSF53383 8 428 7.58E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 PANTHER PTHR11808:SF12 1 242 2.4E-222 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 PANTHER PTHR11808:SF12 272 433 2.4E-222 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 Gene3D G3DSA:3.90.1150.10 295 431 2.0E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 429 4.5E-185 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 PANTHER PTHR11808 1 242 2.4E-222 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 PANTHER PTHR11808 272 433 2.4E-222 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 PIRSF PIRSF001434 1 432 3.1E-120 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 Gene3D G3DSA:3.40.640.10 9 291 1.3E-114 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS05020 9beeab45a123304bf5bc0f41424d6e87 438 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 429 1.7E-133 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS01360 ae262e75f1d6b06ab9578f0295c37072 225 SUPERFAMILY SSF56349 14 223 4.12E-22 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS01360 ae262e75f1d6b06ab9578f0295c37072 225 Gene3D G3DSA:1.10.150.130 16 102 9.1E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal HMPREF9228_RS01360 ae262e75f1d6b06ab9578f0295c37072 225 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 91 9.0E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 HMPREF9228_RS01360 ae262e75f1d6b06ab9578f0295c37072 225 Gene3D G3DSA:1.10.443.10 127 208 3.8E-9 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS05610 56bd5009f0fb60176f014229b3c14084 615 SUPERFAMILY SSF48452 330 451 1.98E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS05610 56bd5009f0fb60176f014229b3c14084 615 Gene3D G3DSA:1.25.40.10 331 416 6.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 PANTHER PTHR26402 7 241 1.4E-98 T 22-04-2016 HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 SUPERFAMILY SSF46894 128 239 5.1E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 Pfam PF00072 Response regulator receiver domain 9 119 9.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 SUPERFAMILY SSF52172 7 130 2.42E-42 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 SMART SM00448 7 118 6.4E-43 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 238 3.3E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 Gene3D G3DSA:3.40.50.2300 7 128 1.5E-41 T 22-04-2016 HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 SMART SM00862 153 238 1.7E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 Gene3D G3DSA:1.10.10.10 129 241 2.3E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02460 30a3db6b5ea6b33b379246897962d96b 243 PANTHER PTHR26402:SF602 7 241 1.4E-98 T 22-04-2016 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 SUPERFAMILY SSF51445 21 517 6.85E-147 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 PANTHER PTHR10357 21 243 2.7E-216 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 PANTHER PTHR10357 265 433 2.7E-216 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 PANTHER PTHR10357 499 606 2.7E-216 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 PANTHER PTHR10357 451 463 2.7E-216 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 Gene3D G3DSA:3.90.400.10 123 198 1.8E-27 T 22-04-2016 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 Gene3D G3DSA:3.20.20.80 199 518 9.5E-120 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 Gene3D G3DSA:3.20.20.80 20 122 9.5E-120 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 SUPERFAMILY SSF51011 523 605 2.52E-11 T 22-04-2016 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 Pfam PF16657 Maltogenic Amylase, C-terminal domain 523 561 2.6E-6 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 Gene3D G3DSA:2.60.40.1180 524 605 1.5E-20 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 PANTHER PTHR10357:SF142 21 243 2.7E-216 T 22-04-2016 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 PANTHER PTHR10357:SF142 265 433 2.7E-216 T 22-04-2016 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 PANTHER PTHR10357:SF142 499 606 2.7E-216 T 22-04-2016 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 PANTHER PTHR10357:SF142 451 463 2.7E-216 T 22-04-2016 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 SMART SM00642 31 458 2.8E-158 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS09430 69e4b4b6fc2b4da07fa013423e1081b8 606 Pfam PF00128 Alpha amylase, catalytic domain 46 414 3.4E-113 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS06650 22cc82c7df588cdf982d6e76391d89cd 276 PIRSF PIRSF039085 21 276 2.3E-112 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 HMPREF9228_RS06650 22cc82c7df588cdf982d6e76391d89cd 276 PANTHER PTHR24220:SF327 26 276 1.2E-124 T 22-04-2016 HMPREF9228_RS06650 22cc82c7df588cdf982d6e76391d89cd 276 PANTHER PTHR24220 26 276 1.2E-124 T 22-04-2016 HMPREF9228_RS06650 22cc82c7df588cdf982d6e76391d89cd 276 SUPERFAMILY SSF52540 27 270 5.32E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06650 22cc82c7df588cdf982d6e76391d89cd 276 Pfam PF00005 ABC transporter 40 202 2.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS06650 22cc82c7df588cdf982d6e76391d89cd 276 SMART SM00382 49 250 2.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06650 22cc82c7df588cdf982d6e76391d89cd 276 Gene3D G3DSA:3.40.50.300 25 273 7.9E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06650 22cc82c7df588cdf982d6e76391d89cd 276 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PRINTS PR00083 Histidinol dehydrogenase signature 268 287 7.16E-68 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PRINTS PR00083 Histidinol dehydrogenase signature 338 363 7.16E-68 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PRINTS PR00083 Histidinol dehydrogenase signature 178 204 7.16E-68 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PRINTS PR00083 Histidinol dehydrogenase signature 112 139 7.16E-68 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PRINTS PR00083 Histidinol dehydrogenase signature 379 397 7.16E-68 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 7.16E-68 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PRINTS PR00083 Histidinol dehydrogenase signature 246 267 7.16E-68 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 Pfam PF00815 Histidinol dehydrogenase 27 444 1.6E-151 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 SUPERFAMILY SSF53720 33 441 1.88E-66 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PIRSF PIRSF000099 5 448 7.5E-148 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 Gene3D G3DSA:3.40.50.1980 241 391 1.3E-60 T 22-04-2016 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 Gene3D G3DSA:3.40.50.1980 33 240 4.9E-75 T 22-04-2016 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 246 278 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 444 1.5E-140 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 11 445 38.018 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 HMPREF9228_RS02820 a71c1df6a1fb26f73ab0dce73e76faf0 465 PANTHER PTHR21256 1 451 7.3E-169 T 22-04-2016 HMPREF9228_RS09360 6da85b36c919daa521cf35b6cb8d650a 237 PANTHER PTHR23029 22 236 3.3E-39 T 22-04-2016 HMPREF9228_RS09360 6da85b36c919daa521cf35b6cb8d650a 237 SMART SM00855 21 198 1.9E-19 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS09360 6da85b36c919daa521cf35b6cb8d650a 237 Gene3D G3DSA:3.40.50.1240 22 236 8.6E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS09360 6da85b36c919daa521cf35b6cb8d650a 237 SUPERFAMILY SSF53254 22 236 9.69E-48 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS09360 6da85b36c919daa521cf35b6cb8d650a 237 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 22 236 2.7E-41 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS09360 6da85b36c919daa521cf35b6cb8d650a 237 PANTHER PTHR23029:SF23 22 236 3.3E-39 T 22-04-2016 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 Gene3D G3DSA:1.10.340.30 26 122 3.0E-39 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 SUPERFAMILY SSF48150 9 173 6.44E-62 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 SUPERFAMILY SSF48150 201 241 6.44E-62 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 Pfam PF00633 Helix-hairpin-helix motif 100 128 1.5E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 SMART SM00478 39 196 2.3E-37 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 PANTHER PTHR10359 200 254 3.1E-60 T 22-04-2016 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 PANTHER PTHR10359 12 177 3.1E-60 T 22-04-2016 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 SMART SM00525 217 237 3.5E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 218 234 2.5E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 Gene3D G3DSA:1.10.1670.10 123 242 7.4E-33 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal HMPREF9228_RS06780 40e04f3efc4f4f25211e35b7483729c0 320 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 154 5.9E-16 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 HMPREF9228_RS04970 80e336ab587dfc30882a2e232b39806a 220 Gene3D G3DSA:1.10.3720.10 10 213 1.9E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04970 80e336ab587dfc30882a2e232b39806a 220 PANTHER PTHR30614 2 218 4.4E-61 T 22-04-2016 HMPREF9228_RS04970 80e336ab587dfc30882a2e232b39806a 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 2.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04970 80e336ab587dfc30882a2e232b39806a 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 2.3E-27 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 HMPREF9228_RS04970 80e336ab587dfc30882a2e232b39806a 220 SUPERFAMILY SSF161098 12 214 8.9E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 SUPERFAMILY SSF49303 246 347 1.18E-17 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Pfam PF00703 Glycosyl hydrolases family 2 245 347 1.3E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 349 645 1.9E-118 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 SUPERFAMILY SSF49303 638 740 1.58E-21 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PANTHER PTHR10066 59 593 8.8E-240 T 22-04-2016 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PANTHER PTHR10066 611 1034 8.8E-240 T 22-04-2016 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 358 372 2.1E-35 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 549 564 2.1E-35 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 171 186 2.1E-35 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 469 484 2.1E-35 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 389 407 2.1E-35 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 SUPERFAMILY SSF74650 758 1043 4.39E-69 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Gene3D G3DSA:2.70.98.10 758 1043 4.6E-71 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Pfam PF16353 Domain of unknown function(DUF4981) 653 739 6.8E-16 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PANTHER PTHR10066:SF72 59 593 8.8E-240 T 22-04-2016 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 PANTHER PTHR10066:SF72 611 1034 8.8E-240 T 22-04-2016 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Gene3D G3DSA:2.60.40.320 643 739 3.3E-19 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Pfam PF02929 Beta galactosidase small chain 775 1039 1.1E-56 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 469 483 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 SMART SM01038 769 1043 1.1E-84 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Gene3D G3DSA:3.20.20.80 349 641 9.2E-96 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 59 243 4.1E-22 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 399 424 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Gene3D G3DSA:2.60.40.320 233 347 3.6E-27 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 SUPERFAMILY SSF51445 349 641 4.12E-87 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 Gene3D G3DSA:2.60.120.260 17 232 2.5E-59 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS07740 997218e612395897ddb88411ceb57c24 1045 SUPERFAMILY SSF49785 24 243 3.4E-47 T 22-04-2016 IPR008979 Galactose-binding domain-like HMPREF9228_RS09215 4725f51f61eb2fa3f3e09d7edca9ed18 456 Pfam PF13635 Domain of unknown function (DUF4143) 239 385 4.3E-22 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 HMPREF9228_RS09215 4725f51f61eb2fa3f3e09d7edca9ed18 456 PANTHER PTHR33295 5 438 2.7E-93 T 22-04-2016 HMPREF9228_RS09215 4725f51f61eb2fa3f3e09d7edca9ed18 456 SUPERFAMILY SSF52540 7 206 3.39E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09215 4725f51f61eb2fa3f3e09d7edca9ed18 456 Pfam PF13173 AAA domain 21 154 2.0E-23 T 22-04-2016 HMPREF9228_RS09215 4725f51f61eb2fa3f3e09d7edca9ed18 456 PANTHER PTHR33295:SF7 5 438 2.7E-93 T 22-04-2016 HMPREF9228_RS09215 4725f51f61eb2fa3f3e09d7edca9ed18 456 Gene3D G3DSA:3.40.50.300 16 128 3.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08125 49cc60880ce0f66daf700c9b1f2ee4ed 132 Gene3D G3DSA:3.30.1490.10 76 132 2.5E-24 T 22-04-2016 HMPREF9228_RS08125 49cc60880ce0f66daf700c9b1f2ee4ed 132 PANTHER PTHR11758 1 132 1.2E-54 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08125 49cc60880ce0f66daf700c9b1f2ee4ed 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.148 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08125 49cc60880ce0f66daf700c9b1f2ee4ed 132 SUPERFAMILY SSF56047 3 132 1.28E-44 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08125 49cc60880ce0f66daf700c9b1f2ee4ed 132 Pfam PF00410 Ribosomal protein S8 5 132 3.7E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08125 49cc60880ce0f66daf700c9b1f2ee4ed 132 Gene3D G3DSA:3.30.1370.30 2 72 2.2E-30 T 22-04-2016 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 9 148 2.5E-44 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 8 319 39.843 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 PANTHER PTHR11540:SF3 1 317 2.7E-130 T 22-04-2016 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 178 184 - T 22-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 Gene3D G3DSA:3.90.110.10 151 317 1.7E-59 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 PIRSF PIRSF000102 5 319 5.8E-108 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 PANTHER PTHR11540 1 317 2.7E-130 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 SUPERFAMILY SSF56327 149 315 9.51E-54 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 315 9.8E-29 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 Gene3D G3DSA:3.40.50.720 3 150 7.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 SUPERFAMILY SSF51735 5 148 3.08E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 13 313 1.7E-119 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 PRINTS PR00086 L-lactate dehydrogenase signature 10 34 1.3E-42 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 PRINTS PR00086 L-lactate dehydrogenase signature 176 189 1.3E-42 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 PRINTS PR00086 L-lactate dehydrogenase signature 35 59 1.3E-42 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 PRINTS PR00086 L-lactate dehydrogenase signature 146 164 1.3E-42 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS02880 9a44cfa0c3bb97436ab7f4d25c4e6fb8 320 PRINTS PR00086 L-lactate dehydrogenase signature 122 142 1.3E-42 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 HMPREF9228_RS05355 ba0681dd833e988eff854a9787bb0c0d 290 Gene3D G3DSA:3.40.50.300 4 223 1.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05355 ba0681dd833e988eff854a9787bb0c0d 290 SUPERFAMILY SSF52540 9 221 3.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05355 ba0681dd833e988eff854a9787bb0c0d 290 Pfam PF00005 ABC transporter 27 168 2.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS05355 ba0681dd833e988eff854a9787bb0c0d 290 PANTHER PTHR24220 9 218 8.7E-52 T 22-04-2016 HMPREF9228_RS05355 ba0681dd833e988eff854a9787bb0c0d 290 SMART SM00382 32 218 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 PANTHER PTHR33280:SF3 1 32 1.2E-26 T 22-04-2016 HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 PANTHER PTHR33280:SF3 50 84 1.2E-26 T 22-04-2016 HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 PANTHER PTHR33280 1 32 1.2E-26 T 22-04-2016 HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 PANTHER PTHR33280 50 84 1.2E-26 T 22-04-2016 HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 Pfam PF01197 Ribosomal protein L31 1 83 1.3E-26 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 SUPERFAMILY SSF143800 1 83 2.98E-20 T 22-04-2016 HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 85 23.703 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 84 9.4E-15 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06355 e461e02683de1e5aeb06fc10309f5a45 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 53 74 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS00495 97f94c8132f25fd6bee85f91ec1723c7 544 Pfam PF07690 Major Facilitator Superfamily 109 504 1.1E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS00495 97f94c8132f25fd6bee85f91ec1723c7 544 SUPERFAMILY SSF103473 106 539 7.41E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS00495 97f94c8132f25fd6bee85f91ec1723c7 544 Gene3D G3DSA:1.20.1250.20 105 316 2.1E-16 T 22-04-2016 HMPREF9228_RS00495 97f94c8132f25fd6bee85f91ec1723c7 544 Gene3D G3DSA:1.20.1250.20 355 539 4.7E-6 T 22-04-2016 HMPREF9228_RS00495 97f94c8132f25fd6bee85f91ec1723c7 544 PANTHER PTHR23528 27 142 1.0E-19 T 22-04-2016 HMPREF9228_RS00495 97f94c8132f25fd6bee85f91ec1723c7 544 PANTHER PTHR23528 164 537 1.0E-19 T 22-04-2016 HMPREF9228_RS00055 09386fc10c3467049e62bb49980f171b 361 PANTHER PTHR36834 1 224 2.6E-23 T 22-04-2016 HMPREF9228_RS00055 09386fc10c3467049e62bb49980f171b 361 PANTHER PTHR36834:SF1 1 224 2.6E-23 T 22-04-2016 HMPREF9228_RS00055 09386fc10c3467049e62bb49980f171b 361 Pfam PF04892 VanZ like family 53 183 2.3E-21 T 22-04-2016 IPR006976 VanZ-like HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 PANTHER PTHR22901:SF1 547 632 1.4E-78 T 22-04-2016 HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 PANTHER PTHR22901:SF1 420 530 1.4E-78 T 22-04-2016 HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 PANTHER PTHR22901:SF1 36 260 1.4E-78 T 22-04-2016 HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 PANTHER PTHR22901:SF1 295 386 1.4E-78 T 22-04-2016 HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 PANTHER PTHR22901 547 632 1.4E-78 T 22-04-2016 HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 PANTHER PTHR22901 420 530 1.4E-78 T 22-04-2016 HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 PANTHER PTHR22901 36 260 1.4E-78 T 22-04-2016 HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 PANTHER PTHR22901 295 386 1.4E-78 T 22-04-2016 HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 SUPERFAMILY SSF52266 567 587 1.74E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 SUPERFAMILY SSF52266 419 537 1.74E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 SUPERFAMILY SSF52266 137 244 1.74E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 SUPERFAMILY SSF52266 328 378 1.74E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS06125 d935fbfa9d4672e27e68792a1625efc1 634 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 138 494 5.3E-71 T 22-04-2016 IPR005181 Sialate O-acetylesterase domain HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 PRINTS PR00990 Ribokinase signature 198 213 2.1E-31 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 PRINTS PR00990 Ribokinase signature 244 255 2.1E-31 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 PRINTS PR00990 Ribokinase signature 58 77 2.1E-31 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 PRINTS PR00990 Ribokinase signature 129 142 2.1E-31 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 PRINTS PR00990 Ribokinase signature 31 52 2.1E-31 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 Gene3D G3DSA:3.40.1190.20 28 328 1.2E-82 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 SUPERFAMILY SSF53613 28 328 5.77E-73 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 PANTHER PTHR10584 10 325 1.6E-74 T 22-04-2016 HMPREF9228_RS03415 989bad7a724ddc86eeb0803f17c488a9 330 Pfam PF00294 pfkB family carbohydrate kinase 28 318 5.7E-56 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB HMPREF9228_RS01480 fb90c6d5d678c01105f82fa9b31813b4 289 Gene3D G3DSA:1.10.3720.10 16 276 4.5E-65 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01480 fb90c6d5d678c01105f82fa9b31813b4 289 PANTHER PTHR32243:SF31 13 289 3.2E-106 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 HMPREF9228_RS01480 fb90c6d5d678c01105f82fa9b31813b4 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 280 1.7E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01480 fb90c6d5d678c01105f82fa9b31813b4 289 SUPERFAMILY SSF161098 17 288 6.54E-72 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01480 fb90c6d5d678c01105f82fa9b31813b4 289 PANTHER PTHR32243 13 289 3.2E-106 T 22-04-2016 HMPREF9228_RS04640 a9c35e4d71f7307a3e04301b104e82ed 150 SUPERFAMILY SSF53098 2 147 1.06E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS04640 a9c35e4d71f7307a3e04301b104e82ed 150 Pfam PF03652 Holliday junction resolvase 2 145 1.7E-39 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 HMPREF9228_RS04640 a9c35e4d71f7307a3e04301b104e82ed 150 PANTHER PTHR33317 4 149 4.9E-26 T 22-04-2016 HMPREF9228_RS04640 a9c35e4d71f7307a3e04301b104e82ed 150 Gene3D G3DSA:3.30.420.140 2 147 7.1E-43 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 HMPREF9228_RS04640 a9c35e4d71f7307a3e04301b104e82ed 150 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 148 19.594 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 HMPREF9228_RS04640 a9c35e4d71f7307a3e04301b104e82ed 150 SMART SM00732 1 113 2.3E-19 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 HMPREF9228_RS04640 a9c35e4d71f7307a3e04301b104e82ed 150 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 145 5.4E-25 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 PANTHER PTHR24221 1 606 8.1E-271 T 22-04-2016 HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 SUPERFAMILY SSF90123 24 346 2.75E-82 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 PANTHER PTHR24221:SF271 1 606 8.1E-271 T 22-04-2016 HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 SUPERFAMILY SSF52540 365 605 4.65E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 Gene3D G3DSA:3.40.50.300 370 597 4.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 Pfam PF00664 ABC transporter transmembrane region 37 320 9.7E-55 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 Pfam PF00005 ABC transporter 387 534 4.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 SMART SM00382 395 580 2.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09300 958aac563b547e616089c730a4b6a984 609 Gene3D G3DSA:1.20.1560.10 24 346 3.5E-83 T 22-04-2016 HMPREF9228_RS04115 f5fb51317a9b09193c8c6a302f64f254 294 Pfam PF02673 Bacitracin resistance protein BacA 6 273 1.4E-70 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 HMPREF9228_RS04115 f5fb51317a9b09193c8c6a302f64f254 294 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 278 17.582 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 HMPREF9228_RS04115 f5fb51317a9b09193c8c6a302f64f254 294 PANTHER PTHR30622:SF4 1 286 1.6E-101 T 22-04-2016 HMPREF9228_RS04115 f5fb51317a9b09193c8c6a302f64f254 294 PANTHER PTHR30622 1 286 1.6E-101 T 22-04-2016 HMPREF9228_RS04115 f5fb51317a9b09193c8c6a302f64f254 294 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 271 9.5E-69 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 SUPERFAMILY SSF52540 3 229 5.33E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 SMART SM00382 27 233 2.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 SMART SM00382 351 518 9.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 Gene3D G3DSA:3.40.50.300 2 101 5.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 Gene3D G3DSA:3.40.50.300 134 269 5.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 Gene3D G3DSA:3.40.50.300 327 517 4.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 SUPERFAMILY SSF52540 330 517 9.35E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 Pfam PF00005 ABC transporter 18 188 6.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 Pfam PF00005 ABC transporter 344 472 3.0E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 PANTHER PTHR19211 3 533 4.9E-263 T 22-04-2016 HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 Pfam PF12848 ABC transporter 233 307 1.4E-6 T 22-04-2016 IPR032781 ABC-transporter extension domain HMPREF9228_RS04240 d14c351c471ef9962df1d3054661f636 533 PANTHER PTHR19211:SF53 3 533 4.9E-263 T 22-04-2016 HMPREF9228_RS01340 d9e75b738f9da2235e595f707ff7cb56 401 PANTHER PTHR23534 1 401 4.8E-29 T 22-04-2016 HMPREF9228_RS01340 d9e75b738f9da2235e595f707ff7cb56 401 SUPERFAMILY SSF103473 12 400 2.75E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS01340 d9e75b738f9da2235e595f707ff7cb56 401 Gene3D G3DSA:1.20.1250.20 219 396 3.0E-11 T 22-04-2016 HMPREF9228_RS01340 d9e75b738f9da2235e595f707ff7cb56 401 Gene3D G3DSA:1.20.1250.20 15 195 1.1E-13 T 22-04-2016 HMPREF9228_RS01340 d9e75b738f9da2235e595f707ff7cb56 401 Pfam PF07690 Major Facilitator Superfamily 24 322 6.2E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS04980 d53eb06412a00c076c6f9a5646c0d83e 262 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS04980 d53eb06412a00c076c6f9a5646c0d83e 262 SUPERFAMILY SSF52540 16 251 3.51E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04980 d53eb06412a00c076c6f9a5646c0d83e 262 PIRSF PIRSF039085 13 257 3.0E-98 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 HMPREF9228_RS04980 d53eb06412a00c076c6f9a5646c0d83e 262 SMART SM00382 41 229 3.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS04980 d53eb06412a00c076c6f9a5646c0d83e 262 Gene3D G3DSA:3.40.50.300 15 253 3.0E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04980 d53eb06412a00c076c6f9a5646c0d83e 262 Pfam PF00005 ABC transporter 32 181 1.5E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04980 d53eb06412a00c076c6f9a5646c0d83e 262 PANTHER PTHR24220 18 255 7.1E-116 T 22-04-2016 HMPREF9228_RS04980 d53eb06412a00c076c6f9a5646c0d83e 262 PANTHER PTHR24220:SF327 18 255 7.1E-116 T 22-04-2016 HMPREF9228_RS08695 c6870349b69fa123f6e202e65cd4b27d 285 Pfam PF13556 PucR C-terminal helix-turn-helix domain 222 277 3.3E-17 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain HMPREF9228_RS08695 c6870349b69fa123f6e202e65cd4b27d 285 PANTHER PTHR33744:SF2 138 285 7.4E-28 T 22-04-2016 HMPREF9228_RS08695 c6870349b69fa123f6e202e65cd4b27d 285 PANTHER PTHR33744 138 285 7.4E-28 T 22-04-2016 HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 Pfam PF01628 HrcA protein C terminal domain 104 344 1.7E-66 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 Gene3D G3DSA:3.30.450.40 176 308 3.7E-16 T 22-04-2016 IPR029016 GAF domain-like HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 Gene3D G3DSA:3.30.450.40 323 359 1.7E-6 T 22-04-2016 IPR029016 GAF domain-like HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 351 25.197 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 SUPERFAMILY SSF46785 2 85 4.74E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 Pfam PF08279 HTH domain 20 57 2.0E-4 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 PANTHER PTHR34824 323 360 2.9E-85 T 22-04-2016 HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 PANTHER PTHR34824 1 302 2.9E-85 T 22-04-2016 HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 4 305 2.0E-74 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 PIRSF PIRSF005485 1 309 3.1E-80 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 SUPERFAMILY SSF55781 71 358 1.0E-38 T 22-04-2016 IPR029016 GAF domain-like HMPREF9228_RS04130 de28fddfb39e65d266aea5a0c55d3136 365 Gene3D G3DSA:1.10.10.10 2 82 7.5E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 187 209 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 PANTHER PTHR21499:SF2 9 325 4.5E-115 T 22-04-2016 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 15 133 5.9E-18 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 SUPERFAMILY SSF55021 348 427 1.22E-6 T 22-04-2016 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 PIRSF PIRSF000098 6 438 5.3E-156 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 Gene3D G3DSA:3.40.50.720 6 152 7.1E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 SUPERFAMILY SSF51735 7 162 3.64E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 SUPERFAMILY SSF55347 141 306 9.15E-51 T 22-04-2016 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 Pfam PF00742 Homoserine dehydrogenase 141 319 4.8E-64 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 PANTHER PTHR21499 9 325 4.5E-115 T 22-04-2016 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 Gene3D G3DSA:3.30.360.10 153 303 7.3E-55 T 22-04-2016 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 Gene3D G3DSA:3.30.70.260 352 427 7.9E-7 T 22-04-2016 HMPREF9228_RS08835 75b51574d0092bc4abd38ed5f2034e62 438 Pfam PF01842 ACT domain 354 424 3.6E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 SUPERFAMILY SSF53822 65 337 1.03E-63 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 54 1.3E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 Gene3D G3DSA:1.10.260.40 14 54 6.9E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 PANTHER PTHR30146:SF43 9 337 2.3E-90 T 22-04-2016 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 Gene3D G3DSA:3.40.50.2300 63 172 7.4E-19 T 22-04-2016 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 Gene3D G3DSA:3.40.50.2300 173 334 6.1E-54 T 22-04-2016 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 PANTHER PTHR30146 9 337 2.3E-90 T 22-04-2016 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 Pfam PF13377 Periplasmic binding protein-like domain 174 334 3.8E-37 T 22-04-2016 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 SMART SM00354 9 75 1.7E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS08800 c69eeeef49d5c83a12365f0e0d2c451e 342 SUPERFAMILY SSF47413 10 62 7.51E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 Pfam PF00874 PRD domain 181 273 3.6E-16 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 Pfam PF00874 PRD domain 72 163 3.4E-9 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 SUPERFAMILY SSF63520 54 163 5.89E-15 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 PANTHER PTHR30185 1 286 5.5E-60 T 22-04-2016 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 SUPERFAMILY SSF63520 175 274 1.16E-23 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 Gene3D G3DSA:1.10.1790.10 173 276 6.2E-27 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 Gene3D G3DSA:1.10.1790.10 65 163 1.5E-12 T 22-04-2016 IPR011608 PRD domain GO:0006355 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 PANTHER PTHR30185:SF2 1 286 5.5E-60 T 22-04-2016 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 SMART SM01061 1 58 2.6E-23 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 Gene3D G3DSA:2.30.24.10 1 53 2.0E-22 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 SUPERFAMILY SSF50151 1 51 2.49E-14 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 HMPREF9228_RS07960 2905257cfbca38d282acd69c8bea8dae 297 Pfam PF03123 CAT RNA binding domain 1 51 4.1E-19 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 HMPREF9228_RS01325 974c963e85e5ac48a36fcf4981fc53e1 234 PANTHER PTHR24220:SF160 9 223 2.9E-58 T 22-04-2016 HMPREF9228_RS01325 974c963e85e5ac48a36fcf4981fc53e1 234 Gene3D G3DSA:3.40.50.300 11 228 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01325 974c963e85e5ac48a36fcf4981fc53e1 234 Pfam PF00005 ABC transporter 23 163 3.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS01325 974c963e85e5ac48a36fcf4981fc53e1 234 SMART SM00382 32 211 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01325 974c963e85e5ac48a36fcf4981fc53e1 234 PANTHER PTHR24220 9 223 2.9E-58 T 22-04-2016 HMPREF9228_RS01325 974c963e85e5ac48a36fcf4981fc53e1 234 SUPERFAMILY SSF52540 6 230 3.07E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 SMART SM00354 3 73 2.1E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.7E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 PANTHER PTHR30146 115 373 1.3E-56 T 22-04-2016 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 PANTHER PTHR30146 2 70 1.3E-56 T 22-04-2016 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 SUPERFAMILY SSF47413 2 61 5.95E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 Pfam PF13377 Periplasmic binding protein-like domain 213 373 4.6E-29 T 22-04-2016 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 Gene3D G3DSA:3.40.50.2300 211 374 2.5E-35 T 22-04-2016 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 Gene3D G3DSA:3.40.50.2300 120 210 1.2E-6 T 22-04-2016 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 Gene3D G3DSA:1.10.260.40 2 59 2.9E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS08315 f2f6eeb2bad766630de50305b69587a9 375 SUPERFAMILY SSF53822 120 373 4.71E-39 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 SUPERFAMILY SSF51430 9 273 5.24E-82 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 PANTHER PTHR11732 6 270 2.6E-113 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 Pfam PF00248 Aldo/keto reductase family 33 264 6.0E-43 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 PRINTS PR00069 Aldo-keto reductase signature 128 145 2.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 PRINTS PR00069 Aldo-keto reductase signature 200 224 2.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 PRINTS PR00069 Aldo-keto reductase signature 40 64 2.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 PRINTS PR00069 Aldo-keto reductase signature 162 191 2.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 PRINTS PR00069 Aldo-keto reductase signature 96 114 2.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 233 248 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 Gene3D G3DSA:3.20.20.100 9 277 5.8E-89 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS07420 9dbb1f23c99d9c463434fbf318c2b8d8 282 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 128 145 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS03110 ba0ead2ee2d0cdbdbf83de5e0af9522a 386 Gene3D G3DSA:1.10.10.60 322 349 1.9E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS03110 ba0ead2ee2d0cdbdbf83de5e0af9522a 386 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 374 9.6E-13 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain HMPREF9228_RS03110 ba0ead2ee2d0cdbdbf83de5e0af9522a 386 PANTHER PTHR33744 1 384 1.7E-37 T 22-04-2016 HMPREF9228_RS03110 ba0ead2ee2d0cdbdbf83de5e0af9522a 386 PANTHER PTHR33744:SF1 1 384 1.7E-37 T 22-04-2016 HMPREF9228_RS03110 ba0ead2ee2d0cdbdbf83de5e0af9522a 386 Pfam PF05651 Putative sugar diacid recognition 4 132 4.4E-36 T 22-04-2016 IPR008599 Putative sugar diacid recognition HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 Pfam PF00271 Helicase conserved C-terminal domain 290 380 1.8E-5 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 Gene3D G3DSA:3.40.50.300 29 208 2.7E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 Gene3D G3DSA:3.40.50.300 238 270 2.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 Gene3D G3DSA:3.40.50.300 303 387 2.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 SMART SM00490 294 380 4.2E-12 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 SMART SM00487 43 229 9.1E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 PANTHER PTHR12131:SF4 334 380 1.2E-12 T 22-04-2016 HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 Pfam PF12029 Domain of unknown function (DUF3516) 391 853 8.0E-197 T 22-04-2016 IPR021904 Protein of unknown function DUF3516 HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 PANTHER PTHR12131 334 380 1.2E-12 T 22-04-2016 HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 SUPERFAMILY SSF52540 58 267 3.19E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 SUPERFAMILY SSF52540 300 388 3.19E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02570 97ac98b3b0e86591e56954fcc9c1c02a 856 Pfam PF00270 DEAD/DEAH box helicase 49 194 1.1E-10 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS05585 f7479e4674aab96372780cd115aa470e 326 Gene3D G3DSA:3.40.50.10330 4 146 1.8E-30 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 HMPREF9228_RS05585 f7479e4674aab96372780cd115aa470e 326 Gene3D G3DSA:2.60.200.30 147 258 7.9E-39 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 HMPREF9228_RS05585 f7479e4674aab96372780cd115aa470e 326 PANTHER PTHR20275 55 280 4.5E-70 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 HMPREF9228_RS05585 f7479e4674aab96372780cd115aa470e 326 Pfam PF01513 ATP-NAD kinase 53 266 5.5E-55 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 HMPREF9228_RS05585 f7479e4674aab96372780cd115aa470e 326 Hamap MF_00361 NAD kinase [nadK]. 4 282 29.738 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 HMPREF9228_RS05585 f7479e4674aab96372780cd115aa470e 326 SUPERFAMILY SSF111331 6 288 2.88E-75 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 Gene3D G3DSA:3.20.20.70 19 287 5.4E-40 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 PANTHER PTHR19278 1 37 1.3E-32 T 22-04-2016 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 PANTHER PTHR19278 53 176 1.3E-32 T 22-04-2016 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 PANTHER PTHR19278 193 254 1.3E-32 T 22-04-2016 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 SUPERFAMILY SSF51366 16 287 7.33E-46 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 PANTHER PTHR19278:SF1 1 37 1.3E-32 T 22-04-2016 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 PANTHER PTHR19278:SF1 53 176 1.3E-32 T 22-04-2016 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 PANTHER PTHR19278:SF1 193 254 1.3E-32 T 22-04-2016 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 SMART SM00934 29 283 5.7E-20 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 16 282 8.2E-62 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS05965 8a5408e31e3c7d5c57c0728c57978ab5 306 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 29 278 4.1E-17 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS06590 213f5d95de280b3ae254fa29e043ef01 325 PANTHER PTHR30465 1 316 1.2E-72 T 22-04-2016 HMPREF9228_RS06590 213f5d95de280b3ae254fa29e043ef01 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 315 1.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06590 213f5d95de280b3ae254fa29e043ef01 325 Gene3D G3DSA:1.10.3720.10 92 314 4.8E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06590 213f5d95de280b3ae254fa29e043ef01 325 PANTHER PTHR30465:SF0 1 316 1.2E-72 T 22-04-2016 HMPREF9228_RS06590 213f5d95de280b3ae254fa29e043ef01 325 SUPERFAMILY SSF161098 92 298 3.92E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS05990 adce6674317a9b0b51f9a3fc44e4c58e 236 PANTHER PTHR24220 22 203 9.6E-36 T 22-04-2016 HMPREF9228_RS05990 adce6674317a9b0b51f9a3fc44e4c58e 236 SMART SM00382 36 226 4.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05990 adce6674317a9b0b51f9a3fc44e4c58e 236 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS05990 adce6674317a9b0b51f9a3fc44e4c58e 236 Gene3D G3DSA:3.40.50.300 19 228 3.5E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05990 adce6674317a9b0b51f9a3fc44e4c58e 236 SUPERFAMILY SSF52540 22 227 5.43E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05990 adce6674317a9b0b51f9a3fc44e4c58e 236 Pfam PF00005 ABC transporter 28 176 2.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09665 235bea2228eb20e660818ec0b93cdca5 227 Pfam PF13151 Protein of unknown function (DUF3990) 7 171 2.6E-39 T 22-04-2016 IPR025051 Protein of unknown function DUF3990 HMPREF9228_RS08840 15952b1044152d075b98da8d0a47c7a2 173 PANTHER PTHR30009:SF4 1 171 3.4E-59 T 22-04-2016 HMPREF9228_RS08840 15952b1044152d075b98da8d0a47c7a2 173 Gene3D G3DSA:3.30.1360.60 82 160 2.2E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 HMPREF9228_RS08840 15952b1044152d075b98da8d0a47c7a2 173 Pfam PF00367 phosphotransferase system, EIIB 89 121 2.3E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 HMPREF9228_RS08840 15952b1044152d075b98da8d0a47c7a2 173 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 99 116 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 HMPREF9228_RS08840 15952b1044152d075b98da8d0a47c7a2 173 SUPERFAMILY SSF55604 86 159 1.44E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 HMPREF9228_RS08840 15952b1044152d075b98da8d0a47c7a2 173 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 55 146 7.3E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 HMPREF9228_RS08840 15952b1044152d075b98da8d0a47c7a2 173 PANTHER PTHR30009 1 171 3.4E-59 T 22-04-2016 HMPREF9228_RS01285 1112e5976538fe3636678c66e58bbdb2 96 Pfam PF01250 Ribosomal protein S6 5 94 3.6E-27 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS01285 1112e5976538fe3636678c66e58bbdb2 96 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 3 96 16.713 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS01285 1112e5976538fe3636678c66e58bbdb2 96 TIGRFAM TIGR00166 S6: ribosomal protein bS6 5 94 2.1E-21 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS01285 1112e5976538fe3636678c66e58bbdb2 96 PANTHER PTHR21011 5 94 1.3E-23 T 22-04-2016 HMPREF9228_RS01285 1112e5976538fe3636678c66e58bbdb2 96 SUPERFAMILY SSF54995 4 95 2.49E-29 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS01285 1112e5976538fe3636678c66e58bbdb2 96 Gene3D G3DSA:3.30.70.60 4 95 1.1E-30 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 HMPREF9228_RS07720 1cb57c87c6e0a1944132e28c3806c03c 321 Pfam PF00589 Phage integrase family 82 259 1.7E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS07720 1cb57c87c6e0a1944132e28c3806c03c 321 PANTHER PTHR30349:SF20 1 290 3.2E-28 T 22-04-2016 HMPREF9228_RS07720 1cb57c87c6e0a1944132e28c3806c03c 321 PANTHER PTHR30349 1 290 3.2E-28 T 22-04-2016 HMPREF9228_RS07720 1cb57c87c6e0a1944132e28c3806c03c 321 SUPERFAMILY SSF56349 2 268 3.24E-42 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS07720 1cb57c87c6e0a1944132e28c3806c03c 321 Gene3D G3DSA:1.10.443.10 80 268 1.0E-33 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 SUPERFAMILY SSF51735 121 289 9.62E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 Gene3D G3DSA:3.40.192.10 6 142 5.6E-40 T 22-04-2016 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 291 34.154 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 119 4.0E-33 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 SUPERFAMILY SSF53223 3 120 1.25E-33 T 22-04-2016 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 290 2.6E-56 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 PANTHER PTHR10025 1 289 1.1E-113 T 22-04-2016 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 Gene3D G3DSA:3.40.50.720 143 272 1.6E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 2.5E-56 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 2.5E-56 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 208 237 2.5E-56 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 282 2.5E-56 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 2.5E-56 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS05345 f4d57203737cd834ce6c338debb2bce9 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 2.5E-56 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 PIRSF PIRSF001467 1 179 6.8E-53 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 53 70 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 6.7E-22 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 6.7E-22 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 58 70 6.7E-22 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 6.7E-22 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 6.7E-22 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 SUPERFAMILY SSF50891 2 177 1.46E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 176 8.7E-45 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 PANTHER PTHR11071 5 175 5.6E-70 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 HMPREF9228_RS03465 f743a8591e28953f4851fcfec3cd0d3c 179 Gene3D G3DSA:2.40.100.10 2 178 1.8E-63 T 22-04-2016 IPR029000 Cyclophilin-like domain HMPREF9228_RS04335 d3a423a08dffa26cd14ca7630e3448bc 247 SUPERFAMILY SSF53474 19 50 8.76E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04335 d3a423a08dffa26cd14ca7630e3448bc 247 SUPERFAMILY SSF53474 90 245 8.76E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04335 d3a423a08dffa26cd14ca7630e3448bc 247 PANTHER PTHR10655 145 245 7.9E-14 T 22-04-2016 HMPREF9228_RS04335 d3a423a08dffa26cd14ca7630e3448bc 247 Pfam PF02230 Phospholipase/Carboxylesterase 127 246 3.1E-12 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 HMPREF9228_RS04335 d3a423a08dffa26cd14ca7630e3448bc 247 Gene3D G3DSA:3.40.50.1820 19 56 4.4E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04335 d3a423a08dffa26cd14ca7630e3448bc 247 Gene3D G3DSA:3.40.50.1820 92 246 4.4E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04335 d3a423a08dffa26cd14ca7630e3448bc 247 PANTHER PTHR10655:SF17 145 245 7.9E-14 T 22-04-2016 HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 SUPERFAMILY SSF55653 60 148 5.49E-17 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 PANTHER PTHR21368 5 139 4.1E-34 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 5 49 2.3E-20 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 4 148 21.992 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 Gene3D G3DSA:3.40.5.10 5 54 6.5E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 5 148 3.6E-34 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 SUPERFAMILY SSF55658 5 57 1.08E-16 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 16 43 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 66 147 2.0E-19 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal HMPREF9228_RS01300 4187d86c185d028308568a13d88c43c9 148 Gene3D G3DSA:3.10.430.100 65 148 2.1E-21 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 Pfam PF08245 Mur ligase middle domain 56 289 3.4E-15 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 156 171 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 385 6.3E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 TIGRFAM TIGR01499 folC: bifunctional protein FolC 34 455 3.1E-101 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 SUPERFAMILY SSF53623 26 311 2.44E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 Gene3D G3DSA:3.90.190.20 315 459 8.4E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 Gene3D G3DSA:3.40.1190.10 28 313 2.0E-94 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 PANTHER PTHR11136:SF0 31 466 2.5E-124 T 22-04-2016 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 PANTHER PTHR11136 31 466 2.5E-124 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 HMPREF9228_RS03025 1ee75cde1883505c8bd82a6f990887bb 533 SUPERFAMILY SSF53244 313 456 3.66E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 Gene3D G3DSA:3.30.950.10 158 270 3.0E-42 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 128 139 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 49 250 2.5E-24 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 51 314 6.8E-62 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 PANTHER PTHR21091:SF18 47 274 2.6E-64 T 22-04-2016 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 Gene3D G3DSA:3.40.1010.10 48 157 8.3E-10 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 48 269 33.678 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 SUPERFAMILY SSF53790 47 267 4.19E-74 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 PANTHER PTHR21091 47 274 2.6E-64 T 22-04-2016 HMPREF9228_RS09280 1ef2f5aafe85f2b55ebd9eea8ca4e7ac 336 PIRSF PIRSF005917 36 336 3.1E-102 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 Gene3D G3DSA:3.40.50.720 172 289 7.3E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 PANTHER PTHR11695 16 346 1.5E-113 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 PANTHER PTHR11695:SF601 16 346 1.5E-113 T 22-04-2016 HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 126 6.0E-23 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 SUPERFAMILY SSF51735 149 312 5.49E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 Gene3D G3DSA:3.90.180.10 2 171 1.6E-42 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 SMART SM00829 14 345 9.0E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 Pfam PF00107 Zinc-binding dehydrogenase 180 286 2.0E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 HMPREF9228_RS06145 fba09e48b52098bf7dc4e75ac5860be6 347 SUPERFAMILY SSF50129 5 168 3.14E-46 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS01915 c568974398846484048ed03558455f31 302 Pfam PF01545 Cation efflux family 12 220 3.1E-28 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 HMPREF9228_RS01915 c568974398846484048ed03558455f31 302 Gene3D G3DSA:1.20.1510.10 9 219 1.5E-9 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain HMPREF9228_RS01915 c568974398846484048ed03558455f31 302 SUPERFAMILY SSF161111 8 221 9.42E-15 T 22-04-2016 HMPREF9228_RS06345 9f469e7f54bdb1182e914ee8d9f09eb6 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 8 56 14.811 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06345 9f469e7f54bdb1182e914ee8d9f09eb6 56 Pfam PF00471 Ribosomal protein L33 11 56 1.5E-18 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06345 9f469e7f54bdb1182e914ee8d9f09eb6 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 24 43 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06345 9f469e7f54bdb1182e914ee8d9f09eb6 56 PANTHER PTHR15238 1 55 1.3E-24 T 22-04-2016 HMPREF9228_RS06345 9f469e7f54bdb1182e914ee8d9f09eb6 56 SUPERFAMILY SSF57829 5 56 1.22E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 HMPREF9228_RS06345 9f469e7f54bdb1182e914ee8d9f09eb6 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.2E-23 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 SUPERFAMILY SSF82771 63 147 9.55E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 Pfam PF02151 UvrB/uvrC motif 258 288 2.5E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 Gene3D G3DSA:3.40.1440.10 63 141 4.7E-9 T 22-04-2016 IPR027299 GIY-YIG domain HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 Gene3D G3DSA:1.10.150.20 750 803 1.2E-20 T 22-04-2016 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 524 736 8.6E-46 T 22-04-2016 IPR001162 UvrC family homology region HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 Pfam PF14520 Helix-hairpin-helix domain 752 804 6.2E-8 T 22-04-2016 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 PANTHER PTHR30562 48 359 2.4E-201 T 22-04-2016 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 PANTHER PTHR30562 446 601 2.4E-201 T 22-04-2016 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 PANTHER PTHR30562 662 802 2.4E-201 T 22-04-2016 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 SMART SM00278 782 801 10.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 SMART SM00278 750 769 12.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 SUPERFAMILY SSF46600 256 292 2.09E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 Hamap MF_00203 UvrABC system protein C [uvrC]. 50 801 26.751 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 Gene3D G3DSA:4.10.860.10 234 293 6.8E-14 T 22-04-2016 IPR001943 UVR domain GO:0005515 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 PANTHER PTHR30562:SF1 48 359 2.4E-201 T 22-04-2016 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 PANTHER PTHR30562:SF1 446 601 2.4E-201 T 22-04-2016 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 PANTHER PTHR30562:SF1 662 802 2.4E-201 T 22-04-2016 HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 SMART SM00465 63 145 3.9E-18 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 Pfam PF01541 GIY-YIG catalytic domain 64 138 5.6E-7 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily HMPREF9228_RS04205 b4c6040254e3ea133771b441ec4fa250 805 SUPERFAMILY SSF47781 709 804 1.65E-24 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 HMPREF9228_RS08190 35a4372ec321cd15504b300e6a40c8eb 218 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 11 213 32.046 T 22-04-2016 IPR013005 50S ribosomal protein uL4 HMPREF9228_RS08190 35a4372ec321cd15504b300e6a40c8eb 218 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 34 208 1.9E-64 T 22-04-2016 IPR013005 50S ribosomal protein uL4 HMPREF9228_RS08190 35a4372ec321cd15504b300e6a40c8eb 218 Pfam PF00573 Ribosomal protein L4/L1 family 34 208 6.0E-61 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08190 35a4372ec321cd15504b300e6a40c8eb 218 Gene3D G3DSA:3.40.1370.10 65 208 1.6E-50 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08190 35a4372ec321cd15504b300e6a40c8eb 218 PANTHER PTHR10746 2 209 1.1E-67 T 22-04-2016 IPR013005 50S ribosomal protein uL4 HMPREF9228_RS08190 35a4372ec321cd15504b300e6a40c8eb 218 SUPERFAMILY SSF52166 5 209 5.23E-68 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS00315 de1d003af9fc7afd04ea0c8f09661689 316 SUPERFAMILY SSF56112 10 268 1.75E-76 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS00315 de1d003af9fc7afd04ea0c8f09661689 316 PANTHER PTHR24362 4 301 1.7E-89 T 22-04-2016 HMPREF9228_RS00315 de1d003af9fc7afd04ea0c8f09661689 316 Gene3D G3DSA:3.30.200.20 5 79 3.5E-22 T 22-04-2016 HMPREF9228_RS00315 de1d003af9fc7afd04ea0c8f09661689 316 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 HMPREF9228_RS00315 de1d003af9fc7afd04ea0c8f09661689 316 PANTHER PTHR24362:SF160 4 301 1.7E-89 T 22-04-2016 HMPREF9228_RS00315 de1d003af9fc7afd04ea0c8f09661689 316 SMART SM00220 13 267 1.1E-55 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 HMPREF9228_RS00315 de1d003af9fc7afd04ea0c8f09661689 316 Gene3D G3DSA:1.10.510.10 80 258 4.8E-53 T 22-04-2016 HMPREF9228_RS00315 de1d003af9fc7afd04ea0c8f09661689 316 Pfam PF00069 Protein kinase domain 14 257 4.1E-50 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 HMPREF9228_RS07935 d4e69648116cb53594930c19d8f6bab3 323 PANTHER PTHR30193:SF2 12 320 5.3E-65 T 22-04-2016 HMPREF9228_RS07935 d4e69648116cb53594930c19d8f6bab3 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 322 3.7E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS07935 d4e69648116cb53594930c19d8f6bab3 323 Gene3D G3DSA:1.10.3720.10 26 314 8.7E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS07935 d4e69648116cb53594930c19d8f6bab3 323 PANTHER PTHR30193 12 320 5.3E-65 T 22-04-2016 HMPREF9228_RS07935 d4e69648116cb53594930c19d8f6bab3 323 SUPERFAMILY SSF161098 28 318 3.03E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 Gene3D G3DSA:3.30.499.10 308 466 1.4E-57 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 460 7.1E-220 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 56.62 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PRINTS PR00415 Aconitase family signature 344 355 1.3E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PRINTS PR00415 Aconitase family signature 287 301 1.3E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PRINTS PR00415 Aconitase family signature 83 96 1.3E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PRINTS PR00415 Aconitase family signature 401 414 1.3E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PRINTS PR00415 Aconitase family signature 210 223 1.3E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PRINTS PR00415 Aconitase family signature 120 133 1.3E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PRINTS PR00415 Aconitase family signature 196 209 1.3E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PRINTS PR00415 Aconitase family signature 134 149 1.3E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 Gene3D G3DSA:3.30.499.10 2 162 6.7E-24 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 Gene3D G3DSA:3.40.1060.10 167 282 1.2E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PANTHER PTHR11670 1 308 3.4E-241 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PANTHER PTHR11670 328 461 3.4E-241 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 SUPERFAMILY SSF53732 1 465 1.7E-157 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 Pfam PF00330 Aconitase family (aconitate hydratase) 7 459 4.1E-149 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PANTHER PTHR11670:SF38 1 308 3.4E-241 T 22-04-2016 HMPREF9228_RS08920 efa6ed0957f76191676b104f4118c6fd 467 PANTHER PTHR11670:SF38 328 461 3.4E-241 T 22-04-2016 HMPREF9228_RS00180 664678d9f5b45c29e6e265f8a7342544 62 Gene3D G3DSA:3.40.30.10 2 60 1.9E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS00180 664678d9f5b45c29e6e265f8a7342544 62 SUPERFAMILY SSF52833 3 60 3.92E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS06875 3fe02190447dba3d840790bb9878a820 210 Gene3D G3DSA:3.90.79.10 94 205 2.9E-5 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS06875 3fe02190447dba3d840790bb9878a820 210 SUPERFAMILY SSF55811 94 207 1.25E-6 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS06875 3fe02190447dba3d840790bb9878a820 210 Pfam PF16262 Domain of unknown function (DUF4916) 42 209 2.8E-80 T 22-04-2016 IPR032582 Protein of unknown function DUF4916 HMPREF9228_RS01860 57a839ff4609aa529a67467d5908cf2b 421 Gene3D G3DSA:3.40.190.10 40 163 3.7E-21 T 22-04-2016 HMPREF9228_RS01860 57a839ff4609aa529a67467d5908cf2b 421 Gene3D G3DSA:3.40.190.10 164 350 1.2E-35 T 22-04-2016 HMPREF9228_RS01860 57a839ff4609aa529a67467d5908cf2b 421 SUPERFAMILY SSF53850 27 419 7.09E-64 T 22-04-2016 HMPREF9228_RS01860 57a839ff4609aa529a67467d5908cf2b 421 Pfam PF13416 Bacterial extracellular solute-binding protein 55 358 4.3E-39 T 22-04-2016 HMPREF9228_RS01860 57a839ff4609aa529a67467d5908cf2b 421 PANTHER PTHR30061 9 417 1.6E-51 T 22-04-2016 HMPREF9228_RS01860 57a839ff4609aa529a67467d5908cf2b 421 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 14 327 43.911 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 PANTHER PTHR10210:SF41 3 332 7.7E-156 T 22-04-2016 HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 16 327 1.1E-109 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 15 130 1.2E-42 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 SUPERFAMILY SSF53271 79 318 1.78E-56 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 SMART SM01400 14 130 2.0E-63 T 22-04-2016 HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 Gene3D G3DSA:3.40.50.2020 10 169 2.1E-68 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 PANTHER PTHR10210 3 332 7.7E-156 T 22-04-2016 HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 Pfam PF14572 Phosphoribosyl synthetase-associated domain 220 326 6.5E-22 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 Gene3D G3DSA:3.40.50.2020 170 297 4.5E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS05220 896eb465f10a0b9004f29d5e90244bd2 340 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 138 153 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 HMPREF9228_RS04555 d6097d0d8122d4a6e246705bf7baa40b 265 SUPERFAMILY SSF88697 20 79 7.12E-8 T 22-04-2016 IPR015947 PUA-like domain HMPREF9228_RS04555 d6097d0d8122d4a6e246705bf7baa40b 265 SUPERFAMILY SSF75217 81 264 2.16E-35 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS04555 d6097d0d8122d4a6e246705bf7baa40b 265 Gene3D G3DSA:3.40.1280.10 21 264 4.6E-57 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS04555 d6097d0d8122d4a6e246705bf7baa40b 265 PANTHER PTHR30027 36 265 7.1E-33 T 22-04-2016 HMPREF9228_RS04555 d6097d0d8122d4a6e246705bf7baa40b 265 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 29 262 5.0E-28 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS04555 d6097d0d8122d4a6e246705bf7baa40b 265 Pfam PF04452 RNA methyltransferase 30 258 2.9E-50 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS04555 d6097d0d8122d4a6e246705bf7baa40b 265 PIRSF PIRSF015601 13 264 2.8E-52 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS01490 8d6d904927a368568db81e7f960add2d 67 SUPERFAMILY SSF46689 6 56 2.69E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 Gene3D G3DSA:1.10.10.10 137 197 6.0E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 1.8E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 1.8E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 1.8E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 SMART SM00448 1 110 1.4E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 SMART SM00421 138 195 1.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 SUPERFAMILY SSF52172 2 116 1.99E-20 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 Pfam PF00072 Response regulator receiver domain 2 109 3.1E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 Gene3D G3DSA:3.40.50.2300 2 114 7.1E-20 T 22-04-2016 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 PANTHER PTHR26402 2 192 3.6E-30 T 22-04-2016 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 SUPERFAMILY SSF46894 136 198 4.08E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS01330 e0d7fdb6d49760d11bbef47332218b80 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 192 3.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 Pfam PF04397 LytTr DNA-binding domain 140 228 1.1E-16 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 SUPERFAMILY SSF52172 1 131 7.83E-21 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 Gene3D G3DSA:3.40.50.2300 3 127 1.5E-24 T 22-04-2016 HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 Pfam PF00072 Response regulator receiver domain 7 110 5.2E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 PANTHER PTHR26402:SF472 4 124 8.3E-20 T 22-04-2016 HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 SMART SM00448 4 118 1.0E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 Gene3D G3DSA:2.40.50.40 131 199 3.5E-18 T 22-04-2016 HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 SMART SM00850 139 231 2.7E-21 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 HMPREF9228_RS09620 adb0a7bc9fdeef719c7fdeac81b4a4be 263 PANTHER PTHR26402 4 124 8.3E-20 T 22-04-2016 HMPREF9228_RS06895 8cf819faf12d7fd1a9c5da52545da9c0 478 Gene3D G3DSA:3.40.50.300 271 446 2.9E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06895 8cf819faf12d7fd1a9c5da52545da9c0 478 PANTHER PTHR32309:SF13 69 465 9.1E-72 T 22-04-2016 HMPREF9228_RS06895 8cf819faf12d7fd1a9c5da52545da9c0 478 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 248 454 6.0E-47 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 HMPREF9228_RS06895 8cf819faf12d7fd1a9c5da52545da9c0 478 Pfam PF02706 Chain length determinant protein 4 139 6.7E-16 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 HMPREF9228_RS06895 8cf819faf12d7fd1a9c5da52545da9c0 478 SUPERFAMILY SSF52540 270 449 2.13E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06895 8cf819faf12d7fd1a9c5da52545da9c0 478 PANTHER PTHR32309 69 465 9.1E-72 T 22-04-2016 HMPREF9228_RS06895 8cf819faf12d7fd1a9c5da52545da9c0 478 Pfam PF13614 AAA domain 282 388 2.4E-14 T 22-04-2016 IPR025669 AAA domain HMPREF9228_RS07145 628b24a00cf8f02b77d00258ef9bafa9 306 Gene3D G3DSA:3.40.50.1820 36 297 3.5E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS07145 628b24a00cf8f02b77d00258ef9bafa9 306 PANTHER PTHR23024 52 306 3.0E-28 T 22-04-2016 HMPREF9228_RS07145 628b24a00cf8f02b77d00258ef9bafa9 306 Pfam PF07859 alpha/beta hydrolase fold 69 267 2.0E-26 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 HMPREF9228_RS07145 628b24a00cf8f02b77d00258ef9bafa9 306 SUPERFAMILY SSF53474 27 278 3.51E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 Pfam PF11896 Domain of unknown function (DUF3416) 68 275 4.9E-43 T 22-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 Gene3D G3DSA:2.60.40.1180 647 732 2.6E-4 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 PANTHER PTHR10357:SF137 79 205 2.7E-167 T 22-04-2016 HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 PANTHER PTHR10357:SF137 248 742 2.7E-167 T 22-04-2016 HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 Gene3D G3DSA:3.20.20.80 254 640 8.9E-62 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 Pfam PF00128 Alpha amylase, catalytic domain 323 420 5.3E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 66 742 41.926 T 22-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 PANTHER PTHR10357 79 205 2.7E-167 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 PANTHER PTHR10357 248 742 2.7E-167 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 SUPERFAMILY SSF51445 271 640 7.04E-72 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS01540 9360ad2fc69ab38dee7e96ee0a408d07 742 SMART SM00642 281 635 9.4E-4 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS08065 48f7e295571bc89b000882e89023516d 179 PANTHER PTHR14413 1 123 1.9E-52 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08065 48f7e295571bc89b000882e89023516d 179 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08065 48f7e295571bc89b000882e89023516d 179 PANTHER PTHR14413:SF5 1 123 1.9E-52 T 22-04-2016 HMPREF9228_RS08065 48f7e295571bc89b000882e89023516d 179 Pfam PF01196 Ribosomal protein L17 20 116 1.6E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08065 48f7e295571bc89b000882e89023516d 179 Gene3D G3DSA:3.90.1030.10 3 116 1.9E-43 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08065 48f7e295571bc89b000882e89023516d 179 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 116 4.1E-36 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08065 48f7e295571bc89b000882e89023516d 179 SUPERFAMILY SSF64263 1 119 1.96E-43 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08065 48f7e295571bc89b000882e89023516d 179 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.014 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 PANTHER PTHR21371 3 337 1.8E-155 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 SUPERFAMILY SSF48179 185 333 6.46E-58 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 Gene3D G3DSA:1.10.1040.10 41 324 2.9E-101 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 328 41.891 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 327 2.4E-120 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 2.4E-75 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 Gene3D G3DSA:3.50.50.60 9 40 1.8E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 SUPERFAMILY SSF51735 4 184 5.37E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00510 516c3b28948826f354543c10d69fa6c4 350 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 326 5.2E-52 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 SUPERFAMILY SSF81296 2 143 3.92E-45 T 22-04-2016 IPR014756 Immunoglobulin E-set HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 SMART SM00642 154 564 8.6E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 3 89 1.3E-21 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 2 694 0.0 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 SUPERFAMILY SSF51011 588 696 1.01E-22 T 22-04-2016 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 SUPERFAMILY SSF51445 131 467 3.69E-134 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 SUPERFAMILY SSF51445 496 571 3.69E-134 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 Gene3D G3DSA:2.60.40.1180 587 696 4.2E-31 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 Gene3D G3DSA:3.20.20.80 148 572 2.9E-124 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 Pfam PF00128 Alpha amylase, catalytic domain 184 525 2.1E-13 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 PANTHER PTHR10357 595 675 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 PANTHER PTHR10357 2 575 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 Gene3D G3DSA:2.60.40.10 2 147 2.7E-57 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 PANTHER PTHR10357:SF74 595 675 0.0 T 22-04-2016 HMPREF9228_RS05285 cdbcab5b7519958b8b5e523e10363c78 706 PANTHER PTHR10357:SF74 2 575 0.0 T 22-04-2016 HMPREF9228_RS09220 320e8bb666b765d9ecc6da21a9b7fc55 170 Pfam PF07690 Major Facilitator Superfamily 86 169 2.5E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS09220 320e8bb666b765d9ecc6da21a9b7fc55 170 SUPERFAMILY SSF103473 83 164 2.62E-10 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS09220 320e8bb666b765d9ecc6da21a9b7fc55 170 Gene3D G3DSA:1.20.1250.20 85 162 2.8E-8 T 22-04-2016 HMPREF9228_RS03525 c7759776f34d18180fd16cbd56168c80 206 Gene3D G3DSA:1.10.10.60 58 150 4.9E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS03525 c7759776f34d18180fd16cbd56168c80 206 SUPERFAMILY SSF46689 55 141 4.84E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS03525 c7759776f34d18180fd16cbd56168c80 206 Pfam PF13518 Helix-turn-helix domain 60 107 2.9E-10 T 22-04-2016 HMPREF9228_RS08405 fdbb10a88e888ab4c27a248e0bc0b741 188 Pfam PF13144 Chaperone for flagella basal body P-ring formation 30 98 7.6E-11 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal HMPREF9228_RS08405 fdbb10a88e888ab4c27a248e0bc0b741 188 SMART SM00858 32 94 6.9E-10 T 22-04-2016 IPR013974 SAF domain HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 5.0E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 267 5.0E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 5.0E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 5.0E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 SUPERFAMILY SSF53671 2 303 4.32E-93 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PANTHER PTHR11405 1 298 9.5E-123 T 22-04-2016 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 5 302 4.1E-100 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 Gene3D G3DSA:3.40.50.1370 4 142 1.5E-48 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 3 305 34.462 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PANTHER PTHR11405:SF16 1 298 9.5E-123 T 22-04-2016 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 298 6.0E-27 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 143 1.9E-40 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 Gene3D G3DSA:3.40.50.1370 143 290 2.5E-52 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 298 1.2E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 223 232 1.2E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 130 147 1.2E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 37 59 1.2E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 76 85 1.2E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04300 91d1897b95ea097026f3eeb0702700fa 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 262 267 1.2E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS08300 7f5e9d9dcf1daf7b5f9b237aa79f630f 295 PANTHER PTHR32243 17 295 9.1E-106 T 22-04-2016 HMPREF9228_RS08300 7f5e9d9dcf1daf7b5f9b237aa79f630f 295 SUPERFAMILY SSF161098 27 295 3.08E-71 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08300 7f5e9d9dcf1daf7b5f9b237aa79f630f 295 Gene3D G3DSA:1.10.3720.10 26 283 2.9E-69 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08300 7f5e9d9dcf1daf7b5f9b237aa79f630f 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 289 2.9E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08300 7f5e9d9dcf1daf7b5f9b237aa79f630f 295 PANTHER PTHR32243:SF31 17 295 9.1E-106 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 HMPREF9228_RS02680 76c3187f01e7cb305a78b90e73431e04 125 PANTHER PTHR33777 4 125 2.1E-15 T 22-04-2016 HMPREF9228_RS02680 76c3187f01e7cb305a78b90e73431e04 125 Gene3D G3DSA:3.30.70.930 23 120 1.9E-23 T 22-04-2016 IPR029756 MTH1187/YkoF-like HMPREF9228_RS02680 76c3187f01e7cb305a78b90e73431e04 125 Pfam PF01910 Thiamine-binding protein 27 115 2.8E-21 T 22-04-2016 IPR002767 Thiamine-binding protein HMPREF9228_RS02680 76c3187f01e7cb305a78b90e73431e04 125 SUPERFAMILY SSF89957 26 123 1.44E-27 T 22-04-2016 IPR029756 MTH1187/YkoF-like HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 445 4.5E-97 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 Pfam PF13393 Histidyl-tRNA synthetase 9 346 2.4E-23 T 22-04-2016 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 PANTHER PTHR11476:SF1 9 443 1.8E-105 T 22-04-2016 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 Pfam PF03129 Anticodon binding domain 366 417 1.0E-6 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 457 23.393 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 Gene3D G3DSA:3.40.50.800 362 444 3.9E-17 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 PANTHER PTHR11476 9 443 1.8E-105 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 Gene3D G3DSA:3.30.930.10 266 351 2.5E-68 T 22-04-2016 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 Gene3D G3DSA:3.30.930.10 6 203 2.5E-68 T 22-04-2016 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 PIRSF PIRSF001549 2 457 1.2E-87 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 SUPERFAMILY SSF55681 238 351 2.07E-55 T 22-04-2016 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 SUPERFAMILY SSF55681 7 210 2.07E-55 T 22-04-2016 HMPREF9228_RS02515 6e2813a87bef98f9abb9eb9b8f8bd79e 463 SUPERFAMILY SSF52954 361 446 6.8E-12 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS05930 5a018f6b7475ff34ca4de7cbc527ef99 83 TIGRFAM TIGR02200 GlrX_actino: glutaredoxin-like protein 3 77 2.5E-35 T 22-04-2016 IPR011915 Glutaredoxin-like protein, actinobacteria HMPREF9228_RS05930 5a018f6b7475ff34ca4de7cbc527ef99 83 Gene3D G3DSA:3.40.30.10 1 73 1.2E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS05930 5a018f6b7475ff34ca4de7cbc527ef99 83 Pfam PF00462 Glutaredoxin 5 58 1.7E-11 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 HMPREF9228_RS05930 5a018f6b7475ff34ca4de7cbc527ef99 83 SUPERFAMILY SSF52833 1 69 4.36E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 ProSitePatterns PS01125 ROK family signature. 154 181 - T 22-04-2016 IPR000600 ROK family HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 Gene3D G3DSA:3.30.420.40 7 158 8.6E-38 T 22-04-2016 HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 PANTHER PTHR18964:SF123 240 328 7.7E-39 T 22-04-2016 HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 PANTHER PTHR18964:SF123 13 217 7.7E-39 T 22-04-2016 HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 Gene3D G3DSA:3.30.420.40 159 305 4.6E-38 T 22-04-2016 HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 SUPERFAMILY SSF53067 8 328 4.78E-47 T 22-04-2016 HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 PANTHER PTHR18964 240 328 7.7E-39 T 22-04-2016 HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 PANTHER PTHR18964 13 217 7.7E-39 T 22-04-2016 HMPREF9228_RS00825 9812ce278c97a99714b35c832ab2d4e8 335 Pfam PF00480 ROK family 10 326 1.1E-40 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS06350 3bd4e0f7f62a540fbfededf4e5669dd0 101 Gene3D G3DSA:4.10.830.10 41 101 9.7E-30 T 22-04-2016 HMPREF9228_RS06350 3bd4e0f7f62a540fbfededf4e5669dd0 101 SUPERFAMILY SSF57716 2 101 2.95E-34 T 22-04-2016 HMPREF9228_RS06350 3bd4e0f7f62a540fbfededf4e5669dd0 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.5E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06350 3bd4e0f7f62a540fbfededf4e5669dd0 101 PANTHER PTHR19836 1 101 2.5E-50 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06350 3bd4e0f7f62a540fbfededf4e5669dd0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.848 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid HMPREF9228_RS02565 aab52e4802e601f945e21a0b62025da9 357 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 88 348 3.6E-102 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 HMPREF9228_RS02565 aab52e4802e601f945e21a0b62025da9 357 SUPERFAMILY SSF52540 145 329 1.12E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02565 aab52e4802e601f945e21a0b62025da9 357 Gene3D G3DSA:3.40.50.300 104 348 2.9E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02565 aab52e4802e601f945e21a0b62025da9 357 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 123 337 2.1E-58 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related HMPREF9228_RS02565 aab52e4802e601f945e21a0b62025da9 357 PANTHER PTHR34383 80 344 4.7E-87 T 22-04-2016 HMPREF9228_RS07830 ac7c0681e584e6305ba49824cfc04764 319 PANTHER PTHR33308:SF2 206 319 3.2E-15 T 22-04-2016 HMPREF9228_RS07830 ac7c0681e584e6305ba49824cfc04764 319 PANTHER PTHR33308 206 319 3.2E-15 T 22-04-2016 HMPREF9228_RS07830 ac7c0681e584e6305ba49824cfc04764 319 Pfam PF05257 CHAP domain 205 294 2.9E-21 T 22-04-2016 IPR007921 CHAP domain HMPREF9228_RS07830 ac7c0681e584e6305ba49824cfc04764 319 SUPERFAMILY SSF54001 183 303 1.67E-22 T 22-04-2016 HMPREF9228_RS06495 85ee27822571c7f74cf7f171b8a1d962 289 PANTHER PTHR30514 5 270 2.0E-57 T 22-04-2016 HMPREF9228_RS06495 85ee27822571c7f74cf7f171b8a1d962 289 Gene3D G3DSA:3.40.50.10490 67 263 1.9E-28 T 22-04-2016 HMPREF9228_RS06495 85ee27822571c7f74cf7f171b8a1d962 289 Pfam PF01380 SIS domain 133 260 2.8E-14 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 HMPREF9228_RS06495 85ee27822571c7f74cf7f171b8a1d962 289 PANTHER PTHR30514:SF1 5 270 2.0E-57 T 22-04-2016 HMPREF9228_RS06495 85ee27822571c7f74cf7f171b8a1d962 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 76 4.5E-18 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 HMPREF9228_RS06495 85ee27822571c7f74cf7f171b8a1d962 289 Gene3D G3DSA:1.10.10.10 6 66 3.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06495 85ee27822571c7f74cf7f171b8a1d962 289 SUPERFAMILY SSF46689 6 79 6.99E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS06495 85ee27822571c7f74cf7f171b8a1d962 289 SUPERFAMILY SSF53697 112 265 1.37E-28 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 SUPERFAMILY SSF56672 535 946 7.12E-126 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 TIGRFAM TIGR00593 pola: DNA polymerase I 9 947 1.2E-258 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PANTHER PTHR10133:SF27 316 946 3.4E-286 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PANTHER PTHR10133:SF27 3 287 3.4E-286 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 SUPERFAMILY SSF53098 381 534 4.55E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PANTHER PTHR10133 316 946 3.4E-286 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PANTHER PTHR10133 3 287 3.4E-286 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 177 269 3.9E-26 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 SMART SM00279 179 214 1.6E-8 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Gene3D G3DSA:1.10.150.20 192 251 1.7E-22 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 SMART SM00482 707 914 9.1E-97 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 175 6.2E-50 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 SUPERFAMILY SSF88723 4 170 3.6E-48 T 22-04-2016 IPR029060 PIN domain-like HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Gene3D G3DSA:1.10.150.20 734 840 2.0E-27 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Gene3D G3DSA:3.30.70.370 841 947 4.9E-63 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Gene3D G3DSA:3.30.70.370 684 733 4.9E-63 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Gene3D G3DSA:1.20.1060.10 559 683 3.1E-27 T 22-04-2016 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 SUPERFAMILY SSF47807 177 286 1.11E-28 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Gene3D G3DSA:3.40.50.1010 8 191 1.1E-61 T 22-04-2016 IPR029060 PIN domain-like HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 SMART SM00475 5 267 9.7E-116 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 867 883 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 897 910 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 752 765 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 699 714 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 835 846 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 676 698 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 722 745 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 PRINTS PR00868 DNA-polymerase family A (pol I) signature 776 801 7.7E-67 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Gene3D G3DSA:3.30.420.10 385 557 2.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 ProSitePatterns PS00447 DNA polymerase family A signature. 776 795 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05300 da2d4e781b2676aacbe9cee66a7c99b5 951 Pfam PF00476 DNA polymerase family A 567 947 8.3E-132 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 SUPERFAMILY SSF81767 232 350 2.49E-42 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Pfam PF01043 SecA preprotein cross-linking domain 233 340 2.1E-35 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Gene3D G3DSA:3.40.50.300 4 227 3.8E-119 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Gene3D G3DSA:3.40.50.300 351 398 3.8E-119 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 818 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PRINTS PR00906 SecA protein signature 321 343 4.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PRINTS PR00906 SecA protein signature 395 408 4.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PRINTS PR00906 SecA protein signature 62 86 4.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PRINTS PR00906 SecA protein signature 169 189 4.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PRINTS PR00906 SecA protein signature 100 114 4.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PRINTS PR00906 SecA protein signature 116 126 4.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PRINTS PR00906 SecA protein signature 358 375 4.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PANTHER PTHR30612 17 502 0.0 T 22-04-2016 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PANTHER PTHR30612 547 862 0.0 T 22-04-2016 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 PANTHER PTHR30612 901 962 0.0 T 22-04-2016 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 SUPERFAMILY SSF52540 350 397 2.26E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 SUPERFAMILY SSF52540 5 227 2.26E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 SUPERFAMILY SSF52540 398 606 1.12E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 ProSitePatterns PS01312 SecA family signature. 482 497 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 832 19.593 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Pfam PF07516 SecA Wing and Scaffold domain 613 829 1.6E-66 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Gene3D G3DSA:3.40.50.300 399 615 1.2E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 SMART SM00957 5 384 1.2E-277 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Pfam PF02810 SEC-C motif 942 959 2.6E-7 T 22-04-2016 IPR004027 SEC-C motif HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Gene3D G3DSA:3.90.1440.10 233 350 2.1E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 SMART SM00958 228 340 3.6E-61 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 SUPERFAMILY SSF81886 937 949 1.31E-69 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 SUPERFAMILY SSF81886 617 840 1.31E-69 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Pfam PF07517 SecA DEAD-like domain 11 383 2.3E-129 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 HMPREF9228_RS03365 1d3abba392bfd3e440a35e61d3f07f20 962 Gene3D G3DSA:1.10.3060.10 644 830 7.3E-57 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 PANTHER PTHR26402:SF564 2 222 1.2E-59 T 22-04-2016 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 Pfam PF00072 Response regulator receiver domain 4 121 2.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 2.7E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 2.7E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 2.7E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 SMART SM00448 2 121 6.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 215 1.8E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 SUPERFAMILY SSF46894 154 222 7.14E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 SUPERFAMILY SSF52172 1 137 3.84E-30 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 SMART SM00421 160 217 4.4E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 PANTHER PTHR26402 2 222 1.2E-59 T 22-04-2016 HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 Gene3D G3DSA:1.10.10.10 129 222 6.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03630 f99c2d34eb14df00de95b005896e31c6 227 Gene3D G3DSA:3.40.50.2300 1 128 2.7E-33 T 22-04-2016 HMPREF9228_RS07090 d497303b399bea9a2716392381e121f7 233 PANTHER PTHR22854:SF6 10 231 4.8E-20 T 22-04-2016 HMPREF9228_RS07090 d497303b399bea9a2716392381e121f7 233 Gene3D G3DSA:3.20.20.70 6 232 1.6E-36 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS07090 d497303b399bea9a2716392381e121f7 233 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 200 1.7E-12 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 HMPREF9228_RS07090 d497303b399bea9a2716392381e121f7 233 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 10 233 20.329 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 HMPREF9228_RS07090 d497303b399bea9a2716392381e121f7 233 PANTHER PTHR22854 10 231 4.8E-20 T 22-04-2016 HMPREF9228_RS07090 d497303b399bea9a2716392381e121f7 233 SUPERFAMILY SSF51366 6 230 9.73E-28 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS04580 6431121b8324fc1d8008c310d63558d9 184 Gene3D G3DSA:3.90.1010.10 13 181 1.1E-48 T 22-04-2016 HMPREF9228_RS04580 6431121b8324fc1d8008c310d63558d9 184 Pfam PF01592 NifU-like N terminal domain 62 164 1.2E-14 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 HMPREF9228_RS04580 6431121b8324fc1d8008c310d63558d9 184 SUPERFAMILY SSF82649 8 178 7.06E-33 T 22-04-2016 HMPREF9228_RS04580 6431121b8324fc1d8008c310d63558d9 184 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 62 176 3.6E-33 T 22-04-2016 HMPREF9228_RS04580 6431121b8324fc1d8008c310d63558d9 184 PANTHER PTHR10093 66 122 2.5E-18 T 22-04-2016 HMPREF9228_RS04580 6431121b8324fc1d8008c310d63558d9 184 PANTHER PTHR10093 138 174 2.5E-18 T 22-04-2016 HMPREF9228_RS08100 770810de7a73f6fa58c105a501fa275a 150 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 9 150 19.196 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08100 770810de7a73f6fa58c105a501fa275a 150 Gene3D G3DSA:3.100.10.10 37 149 9.1E-29 T 22-04-2016 HMPREF9228_RS08100 770810de7a73f6fa58c105a501fa275a 150 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 32 148 9.3E-32 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P HMPREF9228_RS08100 770810de7a73f6fa58c105a501fa275a 150 PANTHER PTHR12934 1 149 1.0E-57 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08100 770810de7a73f6fa58c105a501fa275a 150 SUPERFAMILY SSF52080 10 148 1.27E-40 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P HMPREF9228_RS08100 770810de7a73f6fa58c105a501fa275a 150 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 9 147 7.2E-46 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS00630 17cce6dcc48aca1d82926c352a76c5c6 223 Gene3D G3DSA:3.40.50.1000 88 184 5.2E-32 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00630 17cce6dcc48aca1d82926c352a76c5c6 223 Gene3D G3DSA:3.40.50.1000 3 17 5.2E-32 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00630 17cce6dcc48aca1d82926c352a76c5c6 223 SUPERFAMILY SSF56784 3 189 5.7E-38 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00630 17cce6dcc48aca1d82926c352a76c5c6 223 PANTHER PTHR18901:SF34 1 184 4.5E-32 T 22-04-2016 HMPREF9228_RS00630 17cce6dcc48aca1d82926c352a76c5c6 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 183 5.4E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS00630 17cce6dcc48aca1d82926c352a76c5c6 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 2.9E-17 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00630 17cce6dcc48aca1d82926c352a76c5c6 223 PANTHER PTHR18901 1 184 4.5E-32 T 22-04-2016 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 70 656 5.3E-194 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 64 661 33.069 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 SUPERFAMILY SSF55186 61 253 3.14E-56 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Gene3D G3DSA:3.30.930.10 254 557 3.7E-106 T 22-04-2016 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Gene3D G3DSA:3.30.54.20 130 199 3.9E-12 T 22-04-2016 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 SUPERFAMILY SSF52954 556 661 2.42E-25 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 PANTHER PTHR11451 31 662 1.5E-258 T 22-04-2016 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 PANTHER PTHR11451:SF5 31 662 1.5E-258 T 22-04-2016 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 SMART SM00863 176 231 6.8E-20 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 187 231 6.3E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 547 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 PRINTS PR01047 Threonyl-tRNA synthetase signature 491 519 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 PRINTS PR01047 Threonyl-tRNA synthetase signature 388 411 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 PRINTS PR01047 Threonyl-tRNA synthetase signature 561 573 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 PRINTS PR01047 Threonyl-tRNA synthetase signature 355 383 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Pfam PF03129 Anticodon binding domain 568 655 9.3E-15 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Gene3D G3DSA:3.40.50.800 558 662 3.5E-26 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Gene3D G3DSA:3.30.980.10 64 127 1.0E-41 T 22-04-2016 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Gene3D G3DSA:3.30.980.10 200 236 1.0E-41 T 22-04-2016 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 352 556 2.3E-37 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS04080 d57d7497fa46abe501ed3979c4527040 677 SUPERFAMILY SSF55681 255 553 7.96E-92 T 22-04-2016 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 7.2E-26 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 Pfam PF02767 DNA polymerase III beta subunit, central domain 126 243 1.8E-22 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 PIRSF PIRSF000804 1 373 4.4E-81 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 Gene3D G3DSA:3.10.150.10 122 248 4.8E-26 T 22-04-2016 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 SUPERFAMILY SSF55979 1 118 1.34E-23 T 22-04-2016 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 PANTHER PTHR30478 2 374 1.9E-83 T 22-04-2016 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 2.6E-77 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 357 7.7E-25 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 SUPERFAMILY SSF55979 247 371 2.96E-25 T 22-04-2016 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 SUPERFAMILY SSF55979 127 247 5.76E-18 T 22-04-2016 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 Gene3D G3DSA:3.10.150.10 1 119 3.4E-28 T 22-04-2016 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 SMART SM00480 17 368 2.9E-84 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS00010 ab57512b8e871c5b97abdfcabd398e6c 374 Gene3D G3DSA:3.10.150.10 252 373 2.3E-34 T 22-04-2016 HMPREF9228_RS03505 e9222d03f74379a90209ffd5349897f6 329 PANTHER PTHR30193:SF2 35 329 2.5E-90 T 22-04-2016 HMPREF9228_RS03505 e9222d03f74379a90209ffd5349897f6 329 Gene3D G3DSA:1.10.3720.10 91 321 3.1E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03505 e9222d03f74379a90209ffd5349897f6 329 SUPERFAMILY SSF160964 44 82 7.59E-5 T 22-04-2016 HMPREF9228_RS03505 e9222d03f74379a90209ffd5349897f6 329 SUPERFAMILY SSF161098 85 311 4.58E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03505 e9222d03f74379a90209ffd5349897f6 329 PANTHER PTHR30193 35 329 2.5E-90 T 22-04-2016 HMPREF9228_RS03505 e9222d03f74379a90209ffd5349897f6 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 315 3.7E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 PANTHER PTHR10566:SF10 66 593 3.3E-119 T 22-04-2016 HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 Gene3D G3DSA:3.90.1200.10 308 361 3.4E-11 T 22-04-2016 HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 Gene3D G3DSA:3.90.1200.10 237 257 3.4E-11 T 22-04-2016 HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 Pfam PF03109 ABC1 family 161 279 1.5E-33 T 22-04-2016 IPR004147 UbiB domain HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 Gene3D G3DSA:3.30.200.20 176 236 4.2E-5 T 22-04-2016 HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 Gene3D G3DSA:3.30.200.20 286 294 4.2E-5 T 22-04-2016 HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 SUPERFAMILY SSF56112 146 206 3.69E-29 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 SUPERFAMILY SSF56112 245 476 3.69E-29 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS01260 14e6c967b22d3e4948b6d11c5ea054e8 606 PANTHER PTHR10566 66 593 3.3E-119 T 22-04-2016 HMPREF9228_RS07475 d1d2212e2cb8e5554e28a8807c5afa0f 292 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 49 62 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 HMPREF9228_RS07475 d1d2212e2cb8e5554e28a8807c5afa0f 292 SUPERFAMILY SSF51717 13 288 1.16E-76 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 HMPREF9228_RS07475 d1d2212e2cb8e5554e28a8807c5afa0f 292 PANTHER PTHR20941 11 291 1.0E-90 T 22-04-2016 HMPREF9228_RS07475 d1d2212e2cb8e5554e28a8807c5afa0f 292 Gene3D G3DSA:3.20.20.20 10 286 1.4E-87 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 HMPREF9228_RS07475 d1d2212e2cb8e5554e28a8807c5afa0f 292 Pfam PF00809 Pterin binding enzyme 16 272 1.9E-68 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 HMPREF9228_RS07475 d1d2212e2cb8e5554e28a8807c5afa0f 292 PANTHER PTHR20941:SF1 11 291 1.0E-90 T 22-04-2016 HMPREF9228_RS07475 d1d2212e2cb8e5554e28a8807c5afa0f 292 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 14 281 4.5E-77 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 HMPREF9228_RS05755 0bf9761e34600fd07790da7c158ce1d3 199 PIRSF PIRSF037394 5 199 6.3E-69 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted HMPREF9228_RS05755 0bf9761e34600fd07790da7c158ce1d3 199 Pfam PF09819 ABC-type cobalt transport system, permease component 15 137 4.9E-39 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 PANTHER PTHR23090 458 563 2.5E-127 T 22-04-2016 HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 PANTHER PTHR23090 1 434 2.5E-127 T 22-04-2016 HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 PIRSF PIRSF006630 1 565 7.0E-206 T 22-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 Pfam PF02540 NAD synthase 273 539 1.9E-60 T 22-04-2016 IPR022310 NAD/GMP synthase HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 SUPERFAMILY SSF56317 1 259 2.62E-56 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 SUPERFAMILY SSF52402 268 435 9.61E-68 T 22-04-2016 HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 SUPERFAMILY SSF52402 467 547 9.61E-68 T 22-04-2016 HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 Gene3D G3DSA:3.60.110.10 2 259 5.6E-52 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 Gene3D G3DSA:3.40.50.620 467 547 2.5E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 Gene3D G3DSA:3.40.50.620 266 435 2.5E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 TIGRFAM TIGR00552 nadE: NAD+ synthetase 279 541 6.1E-47 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 HMPREF9228_RS05150 6166e5c5692be4492b71940852c17233 565 Pfam PF00795 Carbon-nitrogen hydrolase 7 251 4.0E-26 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 PANTHER PTHR11689 115 283 2.9E-21 T 22-04-2016 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 PANTHER PTHR11689 329 465 2.9E-21 T 22-04-2016 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 Gene3D G3DSA:1.10.3080.10 11 301 9.7E-59 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 Gene3D G3DSA:1.10.3080.10 353 461 9.7E-59 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 PANTHER PTHR11689:SF14 115 283 2.9E-21 T 22-04-2016 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 PANTHER PTHR11689:SF14 329 465 2.9E-21 T 22-04-2016 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 Pfam PF00654 Voltage gated chloride channel 69 460 9.6E-61 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 PRINTS PR00762 Chloride channel signature 375 395 7.6E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 PRINTS PR00762 Chloride channel signature 107 126 7.6E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 PRINTS PR00762 Chloride channel signature 408 424 7.6E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 PRINTS PR00762 Chloride channel signature 161 180 7.6E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 SUPERFAMILY SSF81340 7 301 6.54E-69 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 HMPREF9228_RS05115 7bcddf67df38856f31fd667d16c1f2c4 466 SUPERFAMILY SSF81340 353 461 6.54E-69 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 HMPREF9228_RS03940 29fc42063a8c30f2af43647145684bb0 110 PIRSF PIRSF018579 1 110 1.1E-43 T 22-04-2016 IPR009709 Protein of unknown function DUF1290 HMPREF9228_RS03940 29fc42063a8c30f2af43647145684bb0 110 Pfam PF06947 Protein of unknown function (DUF1290) 21 108 2.3E-31 T 22-04-2016 IPR009709 Protein of unknown function DUF1290 HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 Pfam PF07690 Major Facilitator Superfamily 43 431 4.5E-51 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 Gene3D G3DSA:1.20.1250.20 284 465 8.0E-19 T 22-04-2016 HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 SUPERFAMILY SSF103473 270 469 6.93E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 SUPERFAMILY SSF103473 25 220 6.93E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 123 3.8E-6 T 22-04-2016 HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 324 348 3.8E-6 T 22-04-2016 HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 41 65 3.8E-6 T 22-04-2016 HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 163 187 3.8E-6 T 22-04-2016 HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 PANTHER PTHR23501 37 471 1.2E-105 T 22-04-2016 HMPREF9228_RS06060 3bba6d579d81956c84998ba7ff32a7ae 473 Gene3D G3DSA:1.20.1250.20 39 210 5.1E-25 T 22-04-2016 HMPREF9228_RS00110 6c2f2e663c9e0bc8323f028804804b2a 227 Gene3D G3DSA:3.40.1050.10 4 226 2.6E-55 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 HMPREF9228_RS00110 6c2f2e663c9e0bc8323f028804804b2a 227 SUPERFAMILY SSF53056 8 226 1.83E-51 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 HMPREF9228_RS00110 6c2f2e663c9e0bc8323f028804804b2a 227 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 57 64 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 HMPREF9228_RS00110 6c2f2e663c9e0bc8323f028804804b2a 227 SMART SM00947 45 226 2.5E-55 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 HMPREF9228_RS00110 6c2f2e663c9e0bc8323f028804804b2a 227 PANTHER PTHR11002:SF17 2 226 2.9E-63 T 22-04-2016 HMPREF9228_RS00110 6c2f2e663c9e0bc8323f028804804b2a 227 Pfam PF00484 Carbonic anhydrase 53 222 6.7E-44 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 HMPREF9228_RS00110 6c2f2e663c9e0bc8323f028804804b2a 227 PANTHER PTHR11002 2 226 2.9E-63 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 18 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 PANTHER PTHR11451:SF35 1 129 1.8E-60 T 22-04-2016 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 PANTHER PTHR11451 157 310 1.8E-60 T 22-04-2016 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 PRINTS PR00987 Glutamyl-tRNA synthetase signature 213 223 2.3E-7 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 2.3E-7 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 2.3E-7 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 Gene3D G3DSA:3.40.50.620 215 279 2.0E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 Gene3D G3DSA:3.40.50.620 1 65 2.0E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 PANTHER PTHR11451:SF35 157 310 1.8E-60 T 22-04-2016 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 SUPERFAMILY SSF52374 1 151 4.83E-74 T 22-04-2016 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 SUPERFAMILY SSF52374 180 316 4.83E-74 T 22-04-2016 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 Gene3D G3DSA:3.90.800.10 66 213 5.6E-22 T 22-04-2016 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 1 314 1.1E-37 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS08975 7c42f0ac8610fe25d413e97865e0e294 365 PANTHER PTHR11451 1 129 1.8E-60 T 22-04-2016 HMPREF9228_RS02265 8aebb080458c5e5312dd3a915a3837a2 455 Pfam PF00665 Integrase core domain 125 217 8.2E-11 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS02265 8aebb080458c5e5312dd3a915a3837a2 455 PANTHER PTHR35004 1 406 5.8E-24 T 22-04-2016 HMPREF9228_RS02265 8aebb080458c5e5312dd3a915a3837a2 455 SUPERFAMILY SSF53098 128 216 7.02E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02265 8aebb080458c5e5312dd3a915a3837a2 455 PANTHER PTHR35004:SF2 1 406 5.8E-24 T 22-04-2016 HMPREF9228_RS02265 8aebb080458c5e5312dd3a915a3837a2 455 Gene3D G3DSA:3.30.420.10 134 216 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07355 b90c51a084458a4706120225dbf815f1 228 Pfam PF01300 Telomere recombination 26 208 4.9E-44 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 HMPREF9228_RS07355 b90c51a084458a4706120225dbf815f1 228 Gene3D G3DSA:3.90.870.10 14 219 9.6E-62 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain HMPREF9228_RS07355 b90c51a084458a4706120225dbf815f1 228 SUPERFAMILY SSF55821 18 218 8.24E-47 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain HMPREF9228_RS07355 b90c51a084458a4706120225dbf815f1 228 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 14 218 4.9E-44 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 HMPREF9228_RS07355 b90c51a084458a4706120225dbf815f1 228 PANTHER PTHR17490 18 219 1.0E-55 T 22-04-2016 HMPREF9228_RS05840 8e4a9985d5b16d2535080692d4b38c48 407 SUPERFAMILY SSF51717 40 239 4.71E-7 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 HMPREF9228_RS05840 8e4a9985d5b16d2535080692d4b38c48 407 SUPERFAMILY SSF56014 291 373 9.59E-12 T 22-04-2016 HMPREF9228_RS05840 8e4a9985d5b16d2535080692d4b38c48 407 Gene3D G3DSA:3.20.20.70 67 167 3.4E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS05840 8e4a9985d5b16d2535080692d4b38c48 407 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 33 374 2.7E-123 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 HMPREF9228_RS05840 8e4a9985d5b16d2535080692d4b38c48 407 Pfam PF04551 GcpE protein 37 376 7.2E-128 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 HMPREF9228_RS05840 8e4a9985d5b16d2535080692d4b38c48 407 PIRSF PIRSF004640 25 388 1.5E-146 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 HMPREF9228_RS05840 8e4a9985d5b16d2535080692d4b38c48 407 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 31 382 32.92 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 HMPREF9228_RS05840 8e4a9985d5b16d2535080692d4b38c48 407 PANTHER PTHR30454 2 394 2.7E-179 T 22-04-2016 HMPREF9228_RS02605 13677c00af74804d5c43ffbc116d908a 121 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 3 114 8.9E-19 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV HMPREF9228_RS02605 13677c00af74804d5c43ffbc116d908a 121 PANTHER PTHR37309:SF1 2 119 3.1E-15 T 22-04-2016 HMPREF9228_RS02605 13677c00af74804d5c43ffbc116d908a 121 PANTHER PTHR37309 2 119 3.1E-15 T 22-04-2016 HMPREF9228_RS02685 d5a6446239d9fcb3f061610e33215050 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 12 265 6.0E-96 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 HMPREF9228_RS02685 d5a6446239d9fcb3f061610e33215050 269 PANTHER PTHR20858:SF17 1 269 5.4E-112 T 22-04-2016 HMPREF9228_RS02685 d5a6446239d9fcb3f061610e33215050 269 Gene3D G3DSA:3.40.1190.20 10 265 3.3E-101 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS02685 d5a6446239d9fcb3f061610e33215050 269 Pfam PF08543 Phosphomethylpyrimidine kinase 19 263 8.5E-94 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 HMPREF9228_RS02685 d5a6446239d9fcb3f061610e33215050 269 SUPERFAMILY SSF53613 9 267 9.35E-77 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS02685 d5a6446239d9fcb3f061610e33215050 269 PANTHER PTHR20858 1 269 5.4E-112 T 22-04-2016 HMPREF9228_RS08890 2098cf851e54b1bf153f98edf29477d1 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 227 3.7E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08890 2098cf851e54b1bf153f98edf29477d1 262 Gene3D G3DSA:1.10.3720.10 13 227 5.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08890 2098cf851e54b1bf153f98edf29477d1 262 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 120 3.3E-12 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 HMPREF9228_RS08890 2098cf851e54b1bf153f98edf29477d1 262 SUPERFAMILY SSF161098 13 219 5.76E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08890 2098cf851e54b1bf153f98edf29477d1 262 PANTHER PTHR30614 1 233 2.0E-62 T 22-04-2016 HMPREF9228_RS05215 37038824b934b2abf99ca2ff4d2159f4 643 PANTHER PTHR23028 243 381 3.1E-57 T 22-04-2016 HMPREF9228_RS05215 37038824b934b2abf99ca2ff4d2159f4 643 SUPERFAMILY SSF52266 470 637 3.48E-6 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS05215 37038824b934b2abf99ca2ff4d2159f4 643 Pfam PF01757 Acyltransferase family 5 381 1.4E-23 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 HMPREF9228_RS05215 37038824b934b2abf99ca2ff4d2159f4 643 PANTHER PTHR23028:SF53 6 219 3.1E-57 T 22-04-2016 HMPREF9228_RS05215 37038824b934b2abf99ca2ff4d2159f4 643 Gene3D G3DSA:3.40.50.1110 576 640 8.9E-4 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS05215 37038824b934b2abf99ca2ff4d2159f4 643 PANTHER PTHR23028 6 219 3.1E-57 T 22-04-2016 HMPREF9228_RS05215 37038824b934b2abf99ca2ff4d2159f4 643 PANTHER PTHR23028:SF53 243 381 3.1E-57 T 22-04-2016 HMPREF9228_RS01660 8c63bc0c8436fbc60e8c7570e17687e0 312 SUPERFAMILY SSF161098 40 301 2.88E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01660 8c63bc0c8436fbc60e8c7570e17687e0 312 Gene3D G3DSA:1.10.3720.10 43 309 2.5E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01660 8c63bc0c8436fbc60e8c7570e17687e0 312 PANTHER PTHR30193 9 300 2.9E-21 T 22-04-2016 HMPREF9228_RS01660 8c63bc0c8436fbc60e8c7570e17687e0 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 176 306 5.8E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 SUPERFAMILY SSF52096 235 519 6.14E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 146 164 3.3E-6 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 112 126 3.3E-6 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 SUPERFAMILY SSF52096 43 273 4.64E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 PANTHER PTHR22855:SF14 46 540 6.3E-242 T 22-04-2016 HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 PANTHER PTHR22855 46 540 6.3E-242 T 22-04-2016 HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 Gene3D G3DSA:3.90.226.10 289 539 8.4E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 Gene3D G3DSA:3.90.226.10 37 273 5.8E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain HMPREF9228_RS08670 4d8f5c28f0e4ebff1ec8e3493df5f8bb 540 Pfam PF01039 Carboxyl transferase domain 51 537 2.8E-164 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 PANTHER PTHR30295:SF10 1 158 1.9E-39 T 22-04-2016 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 PANTHER PTHR30295 1 158 1.9E-39 T 22-04-2016 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 Gene3D G3DSA:1.20.1260.10 5 158 7.6E-45 T 22-04-2016 IPR012347 Ferritin-related HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 Pfam PF00210 Ferritin-like domain 19 158 9.5E-24 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 PIRSF PIRSF005900 1 159 1.6E-46 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 136 154 8.0E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 8.0E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 8.0E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 HMPREF9228_RS00095 02e868182682e637307769b6dc0a055a 159 SUPERFAMILY SSF47240 6 159 1.14E-37 T 22-04-2016 IPR009078 Ferritin-like superfamily HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 Pfam PF09269 Domain of unknown function (DUF1967) 391 467 4.9E-25 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 ProSitePatterns PS00905 GTP1/OBG family signature. 221 234 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 348 4.0E-119 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 PANTHER PTHR11702:SF3 3 357 4.2E-132 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 PANTHER PTHR11702:SF3 510 546 4.2E-132 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 391 468 1.0E-25 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 SUPERFAMILY SSF82051 4 166 2.62E-44 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 Hamap MF_01454 GTPase Obg [obg]. 3 349 43.451 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 SUPERFAMILY SSF52540 170 370 7.25E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 Gene3D G3DSA:2.70.210.12 4 165 1.6E-45 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 Pfam PF01926 50S ribosome-binding GTPase 170 302 3.7E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 236 254 1.2E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 171 191 1.2E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 234 1.2E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 192 210 1.2E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 SUPERFAMILY SSF102741 401 469 2.09E-18 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 Pfam PF01018 GTP1/OBG 4 166 1.3E-48 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 Gene3D G3DSA:3.40.50.300 169 362 2.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 PANTHER PTHR11702 3 357 4.2E-132 T 22-04-2016 HMPREF9228_RS08745 9ab2ea18a66076ef02d3b0662c626308 563 PANTHER PTHR11702 510 546 4.2E-132 T 22-04-2016 HMPREF9228_RS04325 c77571e64b73d2c431a02f702e268bce 185 Gene3D G3DSA:3.40.50.1240 18 183 1.3E-39 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS04325 c77571e64b73d2c431a02f702e268bce 185 SMART SM00855 18 130 1.4E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS04325 c77571e64b73d2c431a02f702e268bce 185 SUPERFAMILY SSF53254 19 171 5.45E-20 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS04325 c77571e64b73d2c431a02f702e268bce 185 PANTHER PTHR20935 19 99 8.5E-15 T 22-04-2016 HMPREF9228_RS04325 c77571e64b73d2c431a02f702e268bce 185 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 19 92 9.6E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS06225 7861feb91a5b9c8b1faa495b4f60fc80 416 SUPERFAMILY SSF53383 7 414 5.5E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS06225 7861feb91a5b9c8b1faa495b4f60fc80 416 PANTHER PTHR11751:SF354 18 334 3.5E-103 T 22-04-2016 HMPREF9228_RS06225 7861feb91a5b9c8b1faa495b4f60fc80 416 PANTHER PTHR11751:SF354 362 411 3.5E-103 T 22-04-2016 HMPREF9228_RS06225 7861feb91a5b9c8b1faa495b4f60fc80 416 Gene3D G3DSA:3.90.1150.10 261 414 1.0E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS06225 7861feb91a5b9c8b1faa495b4f60fc80 416 Gene3D G3DSA:3.40.640.10 48 260 8.6E-58 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS06225 7861feb91a5b9c8b1faa495b4f60fc80 416 Pfam PF00155 Aminotransferase class I and II 35 407 4.3E-61 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS06225 7861feb91a5b9c8b1faa495b4f60fc80 416 PANTHER PTHR11751 18 334 3.5E-103 T 22-04-2016 HMPREF9228_RS06225 7861feb91a5b9c8b1faa495b4f60fc80 416 PANTHER PTHR11751 362 411 3.5E-103 T 22-04-2016 HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 SUPERFAMILY SSF52317 413 630 1.04E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 Gene3D G3DSA:3.20.20.80 29 405 5.2E-116 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 PANTHER PTHR36447 15 701 3.0E-186 T 22-04-2016 HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 Gene3D G3DSA:3.40.50.880 413 631 7.9E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 Pfam PF02449 Beta-galactosidase 32 402 1.9E-133 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 PIRSF PIRSF001084 21 700 1.0E-205 T 22-04-2016 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 PANTHER PTHR36447:SF1 15 701 3.0E-186 T 22-04-2016 HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 Pfam PF08532 Beta-galactosidase trimerisation domain 415 630 8.9E-49 T 22-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS09210 4d1d8a49fad7db179a1f7ac9b00b2274 701 SUPERFAMILY SSF51445 27 384 4.58E-100 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS09565 32a47c26c75af7c7507066e83afdd176 322 SUPERFAMILY SSF53822 44 319 1.99E-76 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS09565 32a47c26c75af7c7507066e83afdd176 322 Gene3D G3DSA:3.40.50.2300 160 319 2.6E-48 T 22-04-2016 HMPREF9228_RS09565 32a47c26c75af7c7507066e83afdd176 322 Gene3D G3DSA:3.40.50.2300 43 159 3.5E-35 T 22-04-2016 HMPREF9228_RS09565 32a47c26c75af7c7507066e83afdd176 322 Pfam PF13407 Periplasmic binding protein domain 45 297 1.0E-59 T 22-04-2016 IPR025997 Periplasmic binding protein HMPREF9228_RS09565 32a47c26c75af7c7507066e83afdd176 322 PANTHER PTHR32196 41 316 5.7E-58 T 22-04-2016 HMPREF9228_RS09565 32a47c26c75af7c7507066e83afdd176 322 PANTHER PTHR32196:SF41 41 316 5.7E-58 T 22-04-2016 HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 PANTHER PTHR23542:SF1 275 470 1.0E-46 T 22-04-2016 HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 PANTHER PTHR23542:SF1 25 221 1.0E-46 T 22-04-2016 HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 SUPERFAMILY SSF103473 38 229 1.96E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 SUPERFAMILY SSF103473 280 473 1.96E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 PANTHER PTHR23542 275 470 1.0E-46 T 22-04-2016 HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 PANTHER PTHR23542 25 221 1.0E-46 T 22-04-2016 HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 Gene3D G3DSA:1.20.1250.20 292 474 7.3E-17 T 22-04-2016 HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 Gene3D G3DSA:1.20.1250.20 38 218 2.4E-13 T 22-04-2016 HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 Pfam PF07690 Major Facilitator Superfamily 307 464 7.6E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS00970 01d94131e49d63be26b61f2049199407 483 Pfam PF07690 Major Facilitator Superfamily 42 248 8.4E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS06325 57264a0f224a607f55fc363c791cf348 691 Pfam PF00884 Sulfatase 307 603 1.2E-37 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 HMPREF9228_RS06325 57264a0f224a607f55fc363c791cf348 691 Gene3D G3DSA:3.40.720.10 308 546 3.3E-10 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 HMPREF9228_RS06325 57264a0f224a607f55fc363c791cf348 691 SUPERFAMILY SSF53649 389 547 3.71E-8 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 SMART SM00847 464 560 9.7E-27 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934 642 665 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934 8 198 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934 791 928 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934 246 614 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934 693 753 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 Pfam PF00270 DEAD/DEAH box helicase 18 166 4.8E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 Pfam PF11898 Domain of unknown function (DUF3418) 765 1377 8.4E-131 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 SMART SM00487 7 197 6.8E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934:SF109 642 665 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934:SF109 8 198 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934:SF109 791 928 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934:SF109 246 614 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 PANTHER PTHR18934:SF109 693 753 6.0E-261 T 22-04-2016 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 Gene3D G3DSA:3.40.50.300 8 166 6.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 SMART SM00382 24 188 0.0018 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 Gene3D G3DSA:3.40.50.300 273 414 2.4E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 601 750 2.8E-13 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 SUPERFAMILY SSF52540 259 604 2.16E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 SUPERFAMILY SSF52540 10 202 2.16E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 Pfam PF04408 Helicase associated domain (HA2) 467 558 1.2E-10 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 SMART SM00490 291 400 5.1E-12 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS02865 2f6f310e427dc9debabdfef8e5e63429 1378 Pfam PF00271 Helicase conserved C-terminal domain 266 399 1.8E-8 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS03185 233dc81ccc0a848e627206f2fe74bcbc 201 Pfam PF10400 Virulence activator alpha C-term 100 173 2.2E-9 T 22-04-2016 IPR018309 Transcription regulator PadR, C-terminal HMPREF9228_RS03185 233dc81ccc0a848e627206f2fe74bcbc 201 PANTHER PTHR33169:SF2 1 195 1.4E-13 T 22-04-2016 HMPREF9228_RS03185 233dc81ccc0a848e627206f2fe74bcbc 201 Pfam PF03551 Transcriptional regulator PadR-like family 7 85 9.3E-7 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal HMPREF9228_RS03185 233dc81ccc0a848e627206f2fe74bcbc 201 PANTHER PTHR33169 1 195 1.4E-13 T 22-04-2016 HMPREF9228_RS03185 233dc81ccc0a848e627206f2fe74bcbc 201 SUPERFAMILY SSF46785 4 172 8.54E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03185 233dc81ccc0a848e627206f2fe74bcbc 201 Gene3D G3DSA:1.10.10.10 1 92 7.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS08630 d14cf2cea0abbf6b75edd8f6277ebb34 356 SUPERFAMILY SSF47413 2 65 5.38E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS08630 d14cf2cea0abbf6b75edd8f6277ebb34 356 Pfam PF01381 Helix-turn-helix 7 61 1.7E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS08630 d14cf2cea0abbf6b75edd8f6277ebb34 356 SMART SM00530 6 61 7.3E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS08630 d14cf2cea0abbf6b75edd8f6277ebb34 356 PANTHER PTHR10245 1 66 1.5E-20 T 22-04-2016 HMPREF9228_RS08630 d14cf2cea0abbf6b75edd8f6277ebb34 356 PANTHER PTHR10245:SF47 1 66 1.5E-20 T 22-04-2016 HMPREF9228_RS08630 d14cf2cea0abbf6b75edd8f6277ebb34 356 Gene3D G3DSA:1.10.260.40 1 64 4.8E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00545 5a1ef7ec057dd014aabdea89e4137b38 611 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 577 610 1.2E-5 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain HMPREF9228_RS00545 5a1ef7ec057dd014aabdea89e4137b38 611 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 225 407 1.2E-11 T 22-04-2016 IPR026466 Fimbrial isopeptide formation D2 domain HMPREF9228_RS00545 5a1ef7ec057dd014aabdea89e4137b38 611 Pfam PF05738 Cna protein B-type domain 444 520 3.2E-9 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain HMPREF9228_RS04495 8b7e6ef20bfe50911fa13f52c0cb4e9b 293 Gene3D G3DSA:1.10.287.1080 53 111 8.5E-11 T 22-04-2016 HMPREF9228_RS04495 8b7e6ef20bfe50911fa13f52c0cb4e9b 293 PANTHER PTHR30522:SF0 36 140 1.1E-46 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG HMPREF9228_RS04495 8b7e6ef20bfe50911fa13f52c0cb4e9b 293 PANTHER PTHR30522:SF0 158 290 1.1E-46 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG HMPREF9228_RS04495 8b7e6ef20bfe50911fa13f52c0cb4e9b 293 PANTHER PTHR30522 36 140 1.1E-46 T 22-04-2016 HMPREF9228_RS04495 8b7e6ef20bfe50911fa13f52c0cb4e9b 293 PANTHER PTHR30522 158 290 1.1E-46 T 22-04-2016 HMPREF9228_RS04495 8b7e6ef20bfe50911fa13f52c0cb4e9b 293 SUPERFAMILY SSF101386 37 136 9.65E-22 T 22-04-2016 HMPREF9228_RS04495 8b7e6ef20bfe50911fa13f52c0cb4e9b 293 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 59 134 3.7E-26 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core HMPREF9228_RS03760 a8ca9c24e4b6e4150d0e2f07b449741f 256 SUPERFAMILY SSF51366 4 256 2.2E-80 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS03760 a8ca9c24e4b6e4150d0e2f07b449741f 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 47.088 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 HMPREF9228_RS03760 a8ca9c24e4b6e4150d0e2f07b449741f 256 PANTHER PTHR21235 2 256 3.6E-120 T 22-04-2016 HMPREF9228_RS03760 a8ca9c24e4b6e4150d0e2f07b449741f 256 Gene3D G3DSA:3.20.20.70 6 256 1.5E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS03760 a8ca9c24e4b6e4150d0e2f07b449741f 256 PANTHER PTHR21235:SF2 2 256 3.6E-120 T 22-04-2016 HMPREF9228_RS03760 a8ca9c24e4b6e4150d0e2f07b449741f 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 2.9E-110 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 HMPREF9228_RS03760 a8ca9c24e4b6e4150d0e2f07b449741f 256 Pfam PF00977 Histidine biosynthesis protein 6 239 1.5E-85 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 Pfam PF01580 FtsK/SpoIIIE family 554 754 2.1E-57 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 95 218 4.0E-5 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 Pfam PF09397 Ftsk gamma domain 863 920 9.9E-22 T 22-04-2016 IPR018541 FtsK gamma domain HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 SMART SM00382 589 787 0.0034 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 Gene3D G3DSA:3.40.50.300 528 820 6.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 PANTHER PTHR22683:SF41 446 943 2.2E-195 T 22-04-2016 HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 SUPERFAMILY SSF46785 859 924 1.31E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 PANTHER PTHR22683 446 943 2.2E-195 T 22-04-2016 HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 SUPERFAMILY SSF52540 528 826 1.47E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03325 41221e39b65d05b949689341902bb376 951 SMART SM00843 858 923 4.9E-29 T 22-04-2016 IPR018541 FtsK gamma domain HMPREF9228_RS02985 aa883ecedd17838079712e363aad7305 298 SUPERFAMILY SSF53613 5 286 5.46E-50 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS02985 aa883ecedd17838079712e363aad7305 298 PANTHER PTHR10584:SF188 4 286 4.8E-52 T 22-04-2016 HMPREF9228_RS02985 aa883ecedd17838079712e363aad7305 298 Gene3D G3DSA:3.40.1190.20 3 287 2.3E-52 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS02985 aa883ecedd17838079712e363aad7305 298 PANTHER PTHR10584 4 286 4.8E-52 T 22-04-2016 HMPREF9228_RS02985 aa883ecedd17838079712e363aad7305 298 Pfam PF00294 pfkB family carbohydrate kinase 21 281 4.7E-37 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB HMPREF9228_RS07820 391c30d2ddd83dd97fc6c492fa9c6f04 241 Pfam PF00877 NlpC/P60 family 142 232 1.0E-21 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS07820 391c30d2ddd83dd97fc6c492fa9c6f04 241 Gene3D G3DSA:3.90.1720.10 126 229 2.3E-33 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS07820 391c30d2ddd83dd97fc6c492fa9c6f04 241 PANTHER PTHR21666 133 227 3.4E-23 T 22-04-2016 HMPREF9228_RS07820 391c30d2ddd83dd97fc6c492fa9c6f04 241 PANTHER PTHR21666 57 67 3.4E-23 T 22-04-2016 HMPREF9228_RS07820 391c30d2ddd83dd97fc6c492fa9c6f04 241 SUPERFAMILY SSF54001 125 229 2.04E-33 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 SUPERFAMILY SSF54211 6 153 6.22E-26 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 PANTHER PTHR20861:SF1 2 216 4.1E-55 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 PANTHER PTHR20861:SF1 274 382 4.1E-55 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 Gene3D G3DSA:3.30.70.890 185 232 5.0E-54 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 Gene3D G3DSA:3.30.70.890 292 375 5.0E-54 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 PRINTS PR00958 Homoserine kinase signature 102 117 4.1E-28 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 PRINTS PR00958 Homoserine kinase signature 137 150 4.1E-28 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 PRINTS PR00958 Homoserine kinase signature 15 30 4.1E-28 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 PRINTS PR00958 Homoserine kinase signature 193 210 4.1E-28 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 PANTHER PTHR20861 2 216 4.1E-55 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 PANTHER PTHR20861 274 382 4.1E-55 T 22-04-2016 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 Pfam PF08544 GHMP kinases C terminal 296 359 5.1E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 Pfam PF00288 GHMP kinases N terminal domain 90 150 3.7E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 SUPERFAMILY SSF55060 188 221 1.8E-13 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 SUPERFAMILY SSF55060 291 358 1.8E-13 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 Gene3D G3DSA:3.30.230.10 7 158 5.9E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS08830 f306e34610a3c2ea35bbb3d74537ace9 384 Hamap MF_00384 Homoserine kinase [thrB]. 8 381 27.203 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PANTHER PTHR24322 151 182 3.8E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PANTHER PTHR24322 12 135 3.8E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 Pfam PF00106 short chain dehydrogenase 8 191 1.3E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.8E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.8E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PANTHER PTHR24322:SF57 151 182 3.8E-24 T 22-04-2016 HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 PANTHER PTHR24322:SF57 12 135 3.8E-24 T 22-04-2016 HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 Gene3D G3DSA:3.40.50.720 7 231 6.8E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04235 3aca44646a10c2735f2f1acc043b394a 235 SUPERFAMILY SSF51735 8 222 1.26E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08585 40e9c5a5c2b7e1d6e3f476a039445d1e 193 Pfam PF03602 Conserved hypothetical protein 95 1 185 9.3E-45 T 22-04-2016 HMPREF9228_RS08585 40e9c5a5c2b7e1d6e3f476a039445d1e 193 PIRSF PIRSF004553 1 190 1.4E-47 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 HMPREF9228_RS08585 40e9c5a5c2b7e1d6e3f476a039445d1e 193 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 187 8.2E-40 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 HMPREF9228_RS08585 40e9c5a5c2b7e1d6e3f476a039445d1e 193 SUPERFAMILY SSF53335 1 185 1.08E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS08585 40e9c5a5c2b7e1d6e3f476a039445d1e 193 Gene3D G3DSA:3.40.50.150 1 188 6.5E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS08585 40e9c5a5c2b7e1d6e3f476a039445d1e 193 PANTHER PTHR18895 18 183 2.2E-26 T 22-04-2016 HMPREF9228_RS08585 40e9c5a5c2b7e1d6e3f476a039445d1e 193 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 HMPREF9228_RS08585 40e9c5a5c2b7e1d6e3f476a039445d1e 193 PANTHER PTHR18895:SF60 18 183 2.2E-26 T 22-04-2016 HMPREF9228_RS09610 3f616f751b87c08dbcb479f3e926a8bc 144 PANTHER PTHR36203 1 143 3.2E-32 T 22-04-2016 HMPREF9228_RS09610 3f616f751b87c08dbcb479f3e926a8bc 144 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 143 1.1E-22 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS09610 3f616f751b87c08dbcb479f3e926a8bc 144 SUPERFAMILY SSF55804 2 143 1.57E-26 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 HMPREF9228_RS09610 3f616f751b87c08dbcb479f3e926a8bc 144 Gene3D G3DSA:3.40.930.10 2 143 8.8E-35 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS08990 0c68cfc0aab3a6719dec78dae3ba3368 273 Pfam PF10370 Domain of unknown function (DUF2437) 1 60 6.1E-13 T 22-04-2016 IPR018833 Domain of unknown function DUF2437 HMPREF9228_RS08990 0c68cfc0aab3a6719dec78dae3ba3368 273 PANTHER PTHR11820 53 272 1.4E-74 T 22-04-2016 HMPREF9228_RS08990 0c68cfc0aab3a6719dec78dae3ba3368 273 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 65 270 2.7E-57 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 HMPREF9228_RS08990 0c68cfc0aab3a6719dec78dae3ba3368 273 SUPERFAMILY SSF56529 57 271 3.53E-65 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 HMPREF9228_RS08990 0c68cfc0aab3a6719dec78dae3ba3368 273 Gene3D G3DSA:3.90.850.10 57 272 1.4E-72 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 HMPREF9228_RS00455 9dc9fc09d81512d344c6f319a8cd44fd 311 SUPERFAMILY SSF103481 213 310 5.49E-9 T 22-04-2016 HMPREF9228_RS00455 9dc9fc09d81512d344c6f319a8cd44fd 311 PANTHER PTHR22911:SF23 30 310 1.3E-35 T 22-04-2016 HMPREF9228_RS00455 9dc9fc09d81512d344c6f319a8cd44fd 311 PANTHER PTHR22911 30 310 1.3E-35 T 22-04-2016 HMPREF9228_RS00455 9dc9fc09d81512d344c6f319a8cd44fd 311 SUPERFAMILY SSF103481 68 168 3.79E-9 T 22-04-2016 HMPREF9228_RS00455 9dc9fc09d81512d344c6f319a8cd44fd 311 Pfam PF00892 EamA-like transporter family 27 165 4.1E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS00455 9dc9fc09d81512d344c6f319a8cd44fd 311 Pfam PF00892 EamA-like transporter family 178 310 5.5E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS05980 ea4ea964720cad8569ed878d9070781e 176 Gene3D G3DSA:1.10.940.10 1 133 1.6E-40 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 HMPREF9228_RS05980 ea4ea964720cad8569ed878d9070781e 176 SUPERFAMILY SSF48013 2 129 2.49E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 HMPREF9228_RS05980 ea4ea964720cad8569ed878d9070781e 176 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 130 2.2E-35 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 HMPREF9228_RS05980 ea4ea964720cad8569ed878d9070781e 176 PANTHER PTHR11078 1 148 2.5E-37 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 HMPREF9228_RS05980 ea4ea964720cad8569ed878d9070781e 176 Pfam PF01029 NusB family 5 128 1.2E-29 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 HMPREF9228_RS05980 ea4ea964720cad8569ed878d9070781e 176 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 1 133 19.951 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 Gene3D G3DSA:3.90.650.10 168 343 1.6E-68 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 344 46.718 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 SUPERFAMILY SSF55326 3 166 6.13E-50 T 22-04-2016 HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 160 6.5E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 339 1.2E-33 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 335 4.0E-137 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 Gene3D G3DSA:3.30.1330.10 18 166 1.2E-62 T 22-04-2016 IPR016188 PurM-like, N-terminal domain HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 PANTHER PTHR10520 5 337 9.6E-199 T 22-04-2016 HMPREF9228_RS06310 3b127ea448c9f410e7bf01db2b4221c5 345 SUPERFAMILY SSF56042 168 342 7.78E-58 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain HMPREF9228_RS08660 8d31b2d190344c03ce9a9218b510d957 143 Gene3D G3DSA:3.40.50.360 9 140 1.1E-25 T 22-04-2016 IPR029039 Flavoprotein-like domain HMPREF9228_RS08660 8d31b2d190344c03ce9a9218b510d957 143 PANTHER PTHR30543 12 57 1.9E-18 T 22-04-2016 HMPREF9228_RS08660 8d31b2d190344c03ce9a9218b510d957 143 PANTHER PTHR30543:SF6 12 57 1.9E-18 T 22-04-2016 HMPREF9228_RS08660 8d31b2d190344c03ce9a9218b510d957 143 Pfam PF03358 NADPH-dependent FMN reductase 9 96 1.2E-16 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 HMPREF9228_RS08660 8d31b2d190344c03ce9a9218b510d957 143 SUPERFAMILY SSF52218 9 126 1.38E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 Gene3D G3DSA:1.10.580.10 50 277 1.2E-83 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 Pfam PF00285 Citrate synthase, C-terminal domain 46 413 1.2E-119 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 PANTHER PTHR11739 36 430 3.5E-157 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 SUPERFAMILY SSF48256 8 430 9.94E-141 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 PRINTS PR00143 Citrate synthase signature 162 175 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 PRINTS PR00143 Citrate synthase signature 292 312 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 PRINTS PR00143 Citrate synthase signature 216 231 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 PRINTS PR00143 Citrate synthase signature 381 395 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 PRINTS PR00143 Citrate synthase signature 238 266 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 PIRSF PIRSF001369 35 430 5.9E-137 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 HMPREF9228_RS07295 2684555cc2318d0948d8d743b16e5f34 430 Gene3D G3DSA:1.10.230.10 278 375 9.0E-33 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 PIRSF PIRSF000148 4 361 1.5E-94 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 Gene3D G3DSA:3.40.50.720 3 169 2.0E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 PANTHER PTHR10174 67 210 1.4E-55 T 22-04-2016 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 PANTHER PTHR10174 232 361 1.4E-55 T 22-04-2016 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 SUPERFAMILY SSF55347 156 343 1.28E-35 T 22-04-2016 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 SMART SM00859 6 138 1.2E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 136 6.0E-32 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 PANTHER PTHR10174:SF141 67 210 1.4E-55 T 22-04-2016 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 PANTHER PTHR10174:SF141 232 361 1.4E-55 T 22-04-2016 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 SUPERFAMILY SSF51735 4 181 2.47E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 173 341 1.2E-24 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 Gene3D G3DSA:3.30.360.10 170 344 1.4E-22 T 22-04-2016 HMPREF9228_RS00750 2e4795ddca6022a2a3114e3bebca884d 364 TIGRFAM TIGR00978 asd_EA: aspartate-semialdehyde dehydrogenase 5 355 5.4E-103 T 22-04-2016 IPR005676 Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking GO:0004073|GO:0006531|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 HMPREF9228_RS06415 a1c659028f0fe06f2435f885e83914a4 142 PANTHER PTHR33202:SF5 7 128 1.6E-38 T 22-04-2016 HMPREF9228_RS06415 a1c659028f0fe06f2435f885e83914a4 142 Pfam PF01475 Ferric uptake regulator family 7 120 4.1E-27 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 HMPREF9228_RS06415 a1c659028f0fe06f2435f885e83914a4 142 Gene3D G3DSA:1.10.10.10 7 74 5.9E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06415 a1c659028f0fe06f2435f885e83914a4 142 SUPERFAMILY SSF46785 7 126 3.52E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06415 a1c659028f0fe06f2435f885e83914a4 142 PANTHER PTHR33202 7 128 1.6E-38 T 22-04-2016 HMPREF9228_RS03250 60a3b4342b16051e956091a288725bb1 286 Gene3D G3DSA:3.60.10.10 1 285 2.9E-77 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS03250 60a3b4342b16051e956091a288725bb1 286 PANTHER PTHR22748 78 286 8.0E-63 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 HMPREF9228_RS03250 60a3b4342b16051e956091a288725bb1 286 PANTHER PTHR22748 1 61 8.0E-63 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 HMPREF9228_RS03250 60a3b4342b16051e956091a288725bb1 286 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 277 2.3E-21 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS03250 60a3b4342b16051e956091a288725bb1 286 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 284 8.1E-56 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 HMPREF9228_RS03250 60a3b4342b16051e956091a288725bb1 286 SUPERFAMILY SSF56219 3 285 2.62E-63 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS06455 08f8e1b3d09b980f072a176c15ba1364 163 Gene3D G3DSA:3.30.1060.10 3 145 4.7E-28 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 HMPREF9228_RS06455 08f8e1b3d09b980f072a176c15ba1364 163 PANTHER PTHR10173:SF40 1 136 3.2E-20 T 22-04-2016 HMPREF9228_RS06455 08f8e1b3d09b980f072a176c15ba1364 163 PANTHER PTHR10173 1 136 3.2E-20 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 HMPREF9228_RS06455 08f8e1b3d09b980f072a176c15ba1364 163 SUPERFAMILY SSF55068 2 146 1.44E-27 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 HMPREF9228_RS06455 08f8e1b3d09b980f072a176c15ba1364 163 Pfam PF01625 Peptide methionine sulfoxide reductase 3 145 9.9E-25 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 HMPREF9228_RS09085 bf618200cf9d845e8e168cecd3468bfc 297 Pfam PF00483 Nucleotidyl transferase 2 238 3.8E-70 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 HMPREF9228_RS09085 bf618200cf9d845e8e168cecd3468bfc 297 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 4.1E-147 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 HMPREF9228_RS09085 bf618200cf9d845e8e168cecd3468bfc 297 SUPERFAMILY SSF53448 2 285 8.11E-87 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09085 bf618200cf9d845e8e168cecd3468bfc 297 PANTHER PTHR22572:SF105 2 268 4.1E-160 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 HMPREF9228_RS09085 bf618200cf9d845e8e168cecd3468bfc 297 PANTHER PTHR22572 2 268 4.1E-160 T 22-04-2016 HMPREF9228_RS09085 bf618200cf9d845e8e168cecd3468bfc 297 Gene3D G3DSA:3.90.550.10 2 265 2.5E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS03535 199a2cb17183cb8ef87bc5139d9638a4 411 Gene3D G3DSA:1.50.10.10 36 394 1.4E-91 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 HMPREF9228_RS03535 199a2cb17183cb8ef87bc5139d9638a4 411 PANTHER PTHR15108 41 408 2.7E-45 T 22-04-2016 HMPREF9228_RS03535 199a2cb17183cb8ef87bc5139d9638a4 411 SUPERFAMILY SSF48208 29 409 6.38E-97 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 HMPREF9228_RS03535 199a2cb17183cb8ef87bc5139d9638a4 411 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 37 390 1.6E-122 T 22-04-2016 HMPREF9228_RS08915 a654ca89e147a5d002e442fa10343d83 229 Pfam PF00694 Aconitase C-terminal domain 1 114 8.8E-27 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08915 a654ca89e147a5d002e442fa10343d83 229 PANTHER PTHR11670:SF27 1 193 4.5E-88 T 22-04-2016 HMPREF9228_RS08915 a654ca89e147a5d002e442fa10343d83 229 Gene3D G3DSA:3.20.19.10 4 187 8.4E-38 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel HMPREF9228_RS08915 a654ca89e147a5d002e442fa10343d83 229 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 181 1.1E-59 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08915 a654ca89e147a5d002e442fa10343d83 229 SUPERFAMILY SSF52016 1 189 1.22E-52 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel HMPREF9228_RS08915 a654ca89e147a5d002e442fa10343d83 229 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 195 37.901 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS08915 a654ca89e147a5d002e442fa10343d83 229 PANTHER PTHR11670 1 193 4.5E-88 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 HMPREF9228_RS07860 e6eec686b3e51ec9c4036ece9b001ab7 321 PANTHER PTHR13929 6 37 1.2E-45 T 22-04-2016 HMPREF9228_RS07860 e6eec686b3e51ec9c4036ece9b001ab7 321 PANTHER PTHR13929 64 321 1.2E-45 T 22-04-2016 HMPREF9228_RS07860 e6eec686b3e51ec9c4036ece9b001ab7 321 Pfam PF01040 UbiA prenyltransferase family 58 285 4.3E-37 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 HMPREF9228_RS07860 e6eec686b3e51ec9c4036ece9b001ab7 321 PANTHER PTHR13929:SF0 6 37 1.2E-45 T 22-04-2016 HMPREF9228_RS07860 e6eec686b3e51ec9c4036ece9b001ab7 321 PANTHER PTHR13929:SF0 64 321 1.2E-45 T 22-04-2016 HMPREF9228_RS07860 e6eec686b3e51ec9c4036ece9b001ab7 321 PIRSF PIRSF005355 1 321 1.5E-79 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 HMPREF9228_RS07860 e6eec686b3e51ec9c4036ece9b001ab7 321 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 64 317 2.5E-57 T 22-04-2016 HMPREF9228_RS07860 e6eec686b3e51ec9c4036ece9b001ab7 321 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 2 319 20.111 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 1898 2028 4.6E-64 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 Gene3D G3DSA:1.10.8.300 2059 2167 6.3E-36 T 22-04-2016 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 Gene3D G3DSA:3.40.50.300 1881 2044 5.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 Gene3D G3DSA:2.60.40.10 1487 1583 6.9E-14 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 Gene3D G3DSA:2.60.40.10 1584 1674 7.9E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 SUPERFAMILY SSF49265 1490 1674 5.54E-22 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 SMART SM00060 1492 1570 1.6E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 SMART SM00060 1584 1666 0.068 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 Pfam PF00041 Fibronectin type III domain 1506 1573 2.9E-8 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 PANTHER PTHR11603 1858 2172 3.3E-126 T 22-04-2016 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 PANTHER PTHR11603:SF149 1858 2172 3.3E-126 T 22-04-2016 HMPREF9228_RS06750 710f939abda938e7976ba64b55c01611 2174 SUPERFAMILY SSF52540 1868 2143 6.54E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 Gene3D G3DSA:3.30.390.10 2 178 6.2E-79 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 Gene3D G3DSA:3.20.20.120 182 425 3.1E-77 T 22-04-2016 IPR029065 Enolase C-terminal domain-like HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 PANTHER PTHR13794 187 425 1.8E-149 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 PANTHER PTHR13794 1 151 1.8E-149 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 SMART SM00922 199 296 1.2E-26 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 Pfam PF13378 Enolase C-terminal domain-like 202 418 9.7E-53 T 22-04-2016 IPR029065 Enolase C-terminal domain-like HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 35 137 1.1E-10 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 SUPERFAMILY SSF54826 3 139 4.38E-40 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 PANTHER PTHR13794:SF58 187 425 1.8E-149 T 22-04-2016 HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 PANTHER PTHR13794:SF58 1 151 1.8E-149 T 22-04-2016 HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 SUPERFAMILY SSF51604 184 425 2.62E-59 T 22-04-2016 IPR029065 Enolase C-terminal domain-like HMPREF9228_RS08795 69d5c40334a64e2b03e9a8da0a76168d 427 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 246 277 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 Gene3D G3DSA:3.30.930.10 11 209 6.2E-95 T 22-04-2016 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 Gene3D G3DSA:3.30.930.10 423 499 6.2E-95 T 22-04-2016 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 99 489 8.8E-43 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 PRINTS PR01046 Prolyl-tRNA synthetase signature 149 160 2.4E-14 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 PRINTS PR01046 Prolyl-tRNA synthetase signature 109 120 2.4E-14 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 PRINTS PR01046 Prolyl-tRNA synthetase signature 139 147 2.4E-14 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 PRINTS PR01046 Prolyl-tRNA synthetase signature 73 91 2.4E-14 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 SUPERFAMILY SSF55681 15 243 3.43E-90 T 22-04-2016 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 SUPERFAMILY SSF55681 438 509 3.43E-90 T 22-04-2016 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 6 587 6.4E-159 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 PANTHER PTHR11451 9 248 1.0E-124 T 22-04-2016 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 PANTHER PTHR11451 430 603 1.0E-124 T 22-04-2016 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 Pfam PF04073 Aminoacyl-tRNA editing domain 261 401 1.3E-16 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 Gene3D G3DSA:3.40.50.800 502 599 1.4E-23 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 SUPERFAMILY SSF52954 495 600 8.91E-27 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 PANTHER PTHR11451:SF3 9 248 1.0E-124 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 PANTHER PTHR11451:SF3 430 603 1.0E-124 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 Pfam PF03129 Anticodon binding domain 507 597 8.2E-17 T 22-04-2016 IPR004154 Anticodon-binding HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 Gene3D G3DSA:3.90.960.10 255 401 1.6E-7 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 Hamap MF_01569 Proline--tRNA ligase [proS]. 6 601 35.897 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 HMPREF9228_RS07320 5694a1bb8aa8568b217f22fa3c53211a 604 SUPERFAMILY SSF55826 286 403 1.57E-10 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 SUPERFAMILY SSF81593 352 513 6.98E-30 T 22-04-2016 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 SUPERFAMILY SSF81593 877 1030 1.02E-29 T 22-04-2016 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 SUPERFAMILY SSF81301 58 345 2.22E-56 T 22-04-2016 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 83 1020 16.307 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 622 861 2.1E-49 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 86 336 6.6E-40 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 Pfam PF08335 GlnD PII-uridylyltransferase 884 1029 1.1E-16 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 Pfam PF08335 GlnD PII-uridylyltransferase 359 512 5.0E-24 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 Gene3D G3DSA:3.30.460.10 185 345 1.0E-49 T 22-04-2016 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 Gene3D G3DSA:3.30.460.10 710 870 1.2E-49 T 22-04-2016 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 SUPERFAMILY SSF81301 594 871 2.13E-64 T 22-04-2016 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 PANTHER PTHR30621 476 1037 2.1E-194 T 22-04-2016 HMPREF9228_RS04305 d7eaa0f9c9dcb11393c7ebc406589bde 1060 PANTHER PTHR30621 1 458 2.1E-194 T 22-04-2016 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 Gene3D G3DSA:1.10.443.10 164 324 3.1E-57 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 Gene3D G3DSA:1.10.443.10 108 132 3.1E-57 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 86 2.5E-15 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 339 30.916 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 SUPERFAMILY SSF56349 162 335 4.12E-52 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 PANTHER PTHR30349 7 123 8.4E-83 T 22-04-2016 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 PANTHER PTHR30349 157 339 8.4E-83 T 22-04-2016 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 SUPERFAMILY SSF47823 6 99 1.18E-14 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 PANTHER PTHR30349:SF5 7 123 8.4E-83 T 22-04-2016 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 PANTHER PTHR30349:SF5 157 339 8.4E-83 T 22-04-2016 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 Pfam PF00589 Phage integrase family 163 324 5.5E-43 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS03225 9240244fda7d0b56500510dd1e737e0b 339 Gene3D G3DSA:1.10.150.130 5 98 3.0E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal HMPREF9228_RS00715 ecfc58f7e73091fa2af49131df362c7a 107 PANTHER PTHR34704 3 86 4.0E-22 T 22-04-2016 HMPREF9228_RS00715 ecfc58f7e73091fa2af49131df362c7a 107 SUPERFAMILY SSF52540 2 74 5.31E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00715 ecfc58f7e73091fa2af49131df362c7a 107 PANTHER PTHR34704:SF1 3 86 4.0E-22 T 22-04-2016 HMPREF9228_RS06440 b706165a8e783553076fcab637b9611a 509 Pfam PF02687 FtsX-like permease family 351 499 1.6E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS06440 b706165a8e783553076fcab637b9611a 509 PANTHER PTHR30572 1 225 2.7E-43 T 22-04-2016 HMPREF9228_RS06440 b706165a8e783553076fcab637b9611a 509 PANTHER PTHR30572 466 508 2.7E-43 T 22-04-2016 HMPREF9228_RS06440 b706165a8e783553076fcab637b9611a 509 PANTHER PTHR30572 299 434 2.7E-43 T 22-04-2016 HMPREF9228_RS06440 b706165a8e783553076fcab637b9611a 509 Pfam PF12704 MacB-like periplasmic core domain 21 153 3.2E-11 T 22-04-2016 IPR025857 MacB-like periplasmic core domain HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 SUPERFAMILY SSF56784 9 202 1.72E-34 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 PANTHER PTHR12725:SF63 63 208 2.7E-24 T 22-04-2016 HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 189 5.9E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 Gene3D G3DSA:3.40.50.1000 6 205 1.1E-33 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 4.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 4.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 4.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 4.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 PANTHER PTHR12725 63 208 2.7E-24 T 22-04-2016 HMPREF9228_RS04250 e9cf1307ca60253430b84fb63bf0bf0a 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 5.0E-14 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 SUPERFAMILY SSF56024 94 221 3.1E-5 T 22-04-2016 HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 Gene3D G3DSA:3.40.50.300 250 408 9.7E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 Pfam PF11907 Domain of unknown function (DUF3427) 762 1066 3.6E-72 T 22-04-2016 IPR021835 Protein of unknown function DUF3427 HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 Pfam PF00271 Helicase conserved C-terminal domain 504 607 1.4E-8 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 SMART SM00487 250 431 1.7E-8 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 Pfam PF04851 Type III restriction enzyme, res subunit 252 404 1.3E-28 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 SMART SM00490 511 609 6.9E-6 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 Pfam PF13091 PLD-like domain 70 212 5.1E-9 T 22-04-2016 IPR025202 Phospholipase D-like domain HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 PANTHER PTHR30195:SF16 170 721 8.5E-48 T 22-04-2016 HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 SUPERFAMILY SSF52540 484 629 2.37E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 SUPERFAMILY SSF52540 300 444 2.37E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 PANTHER PTHR30195 170 721 8.5E-48 T 22-04-2016 HMPREF9228_RS00400 fb707b5d77f7de692cb7518e286f9764 1068 Gene3D G3DSA:3.40.50.300 475 631 4.7E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03120 939800fea62185358efd2de9aade6374 384 SUPERFAMILY SSF110738 1 382 2.48E-128 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 HMPREF9228_RS03120 939800fea62185358efd2de9aade6374 384 Pfam PF02595 Glycerate kinase family 3 379 8.2E-136 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 HMPREF9228_RS03120 939800fea62185358efd2de9aade6374 384 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 381 1.1E-142 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 HMPREF9228_RS03120 939800fea62185358efd2de9aade6374 384 PIRSF PIRSF006078 1 382 9.7E-121 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 HMPREF9228_RS03120 939800fea62185358efd2de9aade6374 384 PANTHER PTHR21599 1 384 3.0E-139 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 HMPREF9228_RS03120 939800fea62185358efd2de9aade6374 384 PANTHER PTHR21599:SF0 1 384 3.0E-139 T 22-04-2016 HMPREF9228_RS03120 939800fea62185358efd2de9aade6374 384 Gene3D G3DSA:3.90.1510.10 42 278 6.0E-91 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 PANTHER PTHR23501 24 513 9.6E-151 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 PANTHER PTHR23501:SF82 24 513 9.6E-151 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 SUPERFAMILY SSF103473 222 477 9.29E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 SUPERFAMILY SSF54631 526 671 4.78E-27 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 Pfam PF00571 CBS domain 619 671 3.0E-10 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 Pfam PF00571 CBS domain 530 583 2.7E-9 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 27 447 1.3E-89 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 SMART SM00116 626 674 1.0E-5 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 SMART SM00116 536 584 5.9E-9 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 Pfam PF07690 Major Facilitator Superfamily 32 422 1.2E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 PRINTS PR01036 Tetracycline resistance protein TetB signature 315 339 1.5E-11 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 1.5E-11 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 PRINTS PR01036 Tetracycline resistance protein TetB signature 121 141 1.5E-11 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 PRINTS PR01036 Tetracycline resistance protein TetB signature 30 54 1.5E-11 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 SUPERFAMILY SSF103473 18 203 1.83E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 Gene3D G3DSA:1.20.1250.20 28 203 2.9E-35 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 Gene3D G3DSA:1.20.1250.20 278 482 3.7E-22 T 22-04-2016 HMPREF9228_RS04890 f28d558b6ad11b8a89ec3fe50059df99 683 Gene3D G3DSA:3.20.20.70 523 673 5.1E-26 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 PANTHER PTHR26402:SF151 89 249 2.0E-42 T 22-04-2016 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 PANTHER PTHR26402 89 249 2.0E-42 T 22-04-2016 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 Gene3D G3DSA:3.40.50.2300 89 195 6.8E-20 T 22-04-2016 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 Pfam PF00072 Response regulator receiver domain 89 158 3.7E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 229 241 2.9E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 199 213 2.9E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 229 2.9E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 Gene3D G3DSA:1.10.10.10 196 255 2.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 SUPERFAMILY SSF52172 89 227 5.64E-18 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 SMART SM00448 40 158 1.6E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 SMART SM00421 196 252 3.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 HMPREF9228_RS03290 8c01d57810c31c61aec70eafa9f23021 261 Pfam PF08281 Sigma-70, region 4 190 240 5.0E-11 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS01530 def877a2d30c8ec9fc38d3eec7b4cd7d 192 Pfam PF02659 Putative manganese efflux pump 33 183 2.0E-46 T 22-04-2016 IPR003810 Putative manganese efflux pump HMPREF9228_RS01530 def877a2d30c8ec9fc38d3eec7b4cd7d 192 PANTHER PTHR35529 5 190 2.4E-50 T 22-04-2016 HMPREF9228_RS01530 def877a2d30c8ec9fc38d3eec7b4cd7d 192 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 3 186 22.643 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 Gene3D G3DSA:3.30.465.10 361 441 8.8E-22 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 SUPERFAMILY SSF54631 226 365 2.91E-32 T 22-04-2016 HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 SMART SM01091 369 449 1.3E-19 T 22-04-2016 IPR005170 Transporter-associated domain HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 Pfam PF00571 CBS domain 236 287 5.7E-6 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 Pfam PF00571 CBS domain 303 352 7.5E-6 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 SUPERFAMILY SSF56176 369 450 1.53E-14 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 PANTHER PTHR22777 8 437 1.7E-88 T 22-04-2016 HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 Gene3D G3DSA:3.10.580.10 218 360 1.7E-23 T 22-04-2016 HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 SMART SM00116 305 353 5.3 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 SMART SM00116 240 289 7.8E-5 T 22-04-2016 IPR000644 CBS domain HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 PANTHER PTHR22777:SF17 8 437 1.7E-88 T 22-04-2016 HMPREF9228_RS04535 67a0c05eca45f97b9ad7e796fb9f6320 475 Pfam PF03471 Transporter associated domain 370 447 1.1E-14 T 22-04-2016 IPR005170 Transporter-associated domain HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 Gene3D G3DSA:3.40.50.1000 31 217 5.1E-31 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 35 214 5.8E-14 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 117 213 1.1E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 PANTHER PTHR12725 14 225 5.5E-23 T 22-04-2016 HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 175 8.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 141 8.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 31 42 8.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 197 8.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS02320 2c6eb3b27f495f282514e8a42094c49b 237 SUPERFAMILY SSF56784 33 225 8.43E-33 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS01895 24464467541f3b267016ce779811e660 77 PANTHER PTHR34654 1 77 1.1E-22 T 22-04-2016 HMPREF9228_RS01895 24464467541f3b267016ce779811e660 77 Pfam PF13083 KH domain 4 66 2.4E-20 T 22-04-2016 HMPREF9228_RS01895 24464467541f3b267016ce779811e660 77 Gene3D G3DSA:3.30.300.120 4 66 4.4E-7 T 22-04-2016 HMPREF9228_RS01895 24464467541f3b267016ce779811e660 77 Hamap MF_00088 UPF0109 protein . 2 73 19.805 T 22-04-2016 IPR020627 Uncharacterised protein family UPF0109 HMPREF9228_RS01895 24464467541f3b267016ce779811e660 77 SUPERFAMILY SSF54814 9 62 4.12E-8 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 Pfam PF00005 ABC transporter 359 542 2.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 Gene3D G3DSA:3.40.50.300 494 608 2.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 Gene3D G3DSA:3.40.50.300 341 456 2.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 PANTHER PTHR24221 1 448 9.8E-180 T 22-04-2016 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 PANTHER PTHR24221 485 622 9.8E-180 T 22-04-2016 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 Gene3D G3DSA:1.20.1560.10 3 321 4.9E-50 T 22-04-2016 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 SUPERFAMILY SSF90123 3 321 3.27E-56 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 SUPERFAMILY SSF52540 485 609 2.96E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 SUPERFAMILY SSF52540 337 434 2.96E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 SMART SM00382 368 590 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 Pfam PF00664 ABC transporter transmembrane region 53 292 1.2E-25 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 PANTHER PTHR24221:SF190 1 448 9.8E-180 T 22-04-2016 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 PANTHER PTHR24221:SF190 485 622 9.8E-180 T 22-04-2016 HMPREF9228_RS09305 51d3cbf3d643a4a5c1e0f48bd8e38489 622 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS01060 1894294add6c211bad82561ea9e3cbb3 56 Gene3D G3DSA:3.40.630.30 2 46 8.6E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS01060 1894294add6c211bad82561ea9e3cbb3 56 Pfam PF00583 Acetyltransferase (GNAT) family 1 43 2.7E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS01060 1894294add6c211bad82561ea9e3cbb3 56 SUPERFAMILY SSF55729 1 49 8.73E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 PANTHER PTHR11638:SF18 1 836 0.0 T 22-04-2016 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 PANTHER PTHR11638 1 836 0.0 T 22-04-2016 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Gene3D G3DSA:3.40.50.300 174 354 2.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Pfam PF07724 AAA domain (Cdc48 subfamily) 547 720 9.0E-54 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 SMART SM00382 548 727 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 SMART SM00382 211 356 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Gene3D G3DSA:1.10.8.60 356 439 3.2E-34 T 22-04-2016 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 331 1.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Gene3D G3DSA:1.10.1780.10 1 146 1.2E-50 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Pfam PF02151 UvrB/uvrC motif 429 462 4.3E-5 T 22-04-2016 IPR001943 UVR domain GO:0005515 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 2.3E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 5.6E-18 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 659 673 1.3E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 626 644 1.3E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 615 1.3E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 552 570 1.3E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 SUPERFAMILY SSF52540 497 810 6.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 726 806 7.4E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 SMART SM01086 726 819 7.3E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 SUPERFAMILY SSF52540 174 471 5.07E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Gene3D G3DSA:1.10.8.60 737 824 9.4E-32 T 22-04-2016 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 582 600 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 SUPERFAMILY SSF81923 3 151 9.81E-33 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 HMPREF9228_RS02485 b74a81e3829d55d39b7a6a036ac8c0ec 863 Gene3D G3DSA:3.40.50.300 501 736 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03550 e69f5d998ff858693d7346851daa0dbb 232 SUPERFAMILY SSF55469 2 228 1.9E-16 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 HMPREF9228_RS03550 e69f5d998ff858693d7346851daa0dbb 232 Pfam PF14512 Putative TM nitroreductase 2 224 2.3E-47 T 22-04-2016 IPR029478 Putative nitroreductase TM1586 HMPREF9228_RS03550 e69f5d998ff858693d7346851daa0dbb 232 Gene3D G3DSA:3.40.109.10 1 140 1.7E-21 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 HMPREF9228_RS03550 e69f5d998ff858693d7346851daa0dbb 232 Gene3D G3DSA:3.40.109.30 165 225 9.6E-8 T 22-04-2016 HMPREF9228_RS05830 61e2bbc343a4fd21a90c4d73c1345b2e 239 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 209 1.6E-40 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 HMPREF9228_RS05830 61e2bbc343a4fd21a90c4d73c1345b2e 239 Pfam PF02565 Recombination protein O C terminal 86 235 2.9E-21 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 HMPREF9228_RS05830 61e2bbc343a4fd21a90c4d73c1345b2e 239 Hamap MF_00201 DNA repair protein RecO [recO]. 2 239 26.288 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 HMPREF9228_RS05830 61e2bbc343a4fd21a90c4d73c1345b2e 239 SUPERFAMILY SSF57863 83 229 1.54E-31 T 22-04-2016 HMPREF9228_RS05830 61e2bbc343a4fd21a90c4d73c1345b2e 239 PANTHER PTHR33991 3 239 2.5E-44 T 22-04-2016 HMPREF9228_RS05830 61e2bbc343a4fd21a90c4d73c1345b2e 239 SUPERFAMILY SSF50249 1 79 2.91E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05830 61e2bbc343a4fd21a90c4d73c1345b2e 239 Gene3D G3DSA:2.40.50.140 1 80 2.0E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS05830 61e2bbc343a4fd21a90c4d73c1345b2e 239 Pfam PF11967 Recombination protein O N terminal 1 79 2.8E-28 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal HMPREF9228_RS05865 12b01e6f4adffba52eca0205b4b54caf 275 PANTHER PTHR10046:SF48 82 265 4.1E-36 T 22-04-2016 HMPREF9228_RS05865 12b01e6f4adffba52eca0205b4b54caf 275 Gene3D G3DSA:3.30.230.10 129 259 2.0E-22 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS05865 12b01e6f4adffba52eca0205b4b54caf 275 SUPERFAMILY SSF54211 130 259 1.02E-19 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS05865 12b01e6f4adffba52eca0205b4b54caf 275 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 132 246 2.7E-12 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 HMPREF9228_RS05865 12b01e6f4adffba52eca0205b4b54caf 275 PANTHER PTHR10046 82 265 4.1E-36 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 HMPREF9228_RS07915 ed873ccdaf4f7277ecaf4fa6f5cdb1cb 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 335 1.1E-128 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 HMPREF9228_RS07915 ed873ccdaf4f7277ecaf4fa6f5cdb1cb 340 Gene3D G3DSA:3.90.25.10 181 338 8.7E-50 T 22-04-2016 HMPREF9228_RS07915 ed873ccdaf4f7277ecaf4fa6f5cdb1cb 340 Gene3D G3DSA:3.40.50.720 1 180 3.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS07915 ed873ccdaf4f7277ecaf4fa6f5cdb1cb 340 PANTHER PTHR10366:SF39 3 340 5.0E-144 T 22-04-2016 HMPREF9228_RS07915 ed873ccdaf4f7277ecaf4fa6f5cdb1cb 340 SUPERFAMILY SSF51735 1 336 5.08E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS07915 ed873ccdaf4f7277ecaf4fa6f5cdb1cb 340 PANTHER PTHR10366 3 340 5.0E-144 T 22-04-2016 HMPREF9228_RS07915 ed873ccdaf4f7277ecaf4fa6f5cdb1cb 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 322 8.6E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS03530 e90e5b47e447aeec8aa0ff2d902aed06 266 Pfam PF13276 HTH-like domain 27 77 7.1E-14 T 22-04-2016 IPR025948 HTH-like domain HMPREF9228_RS03530 e90e5b47e447aeec8aa0ff2d902aed06 266 Gene3D G3DSA:3.30.420.10 95 255 4.9E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS03530 e90e5b47e447aeec8aa0ff2d902aed06 266 Pfam PF00665 Integrase core domain 101 215 2.8E-18 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS03530 e90e5b47e447aeec8aa0ff2d902aed06 266 SUPERFAMILY SSF53098 95 257 2.09E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS03530 e90e5b47e447aeec8aa0ff2d902aed06 266 PANTHER PTHR32552 7 260 3.0E-47 T 22-04-2016 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 SUPERFAMILY SSF53756 11 813 1.41E-280 T 22-04-2016 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 Gene3D G3DSA:3.40.50.2000 478 796 2.0E-119 T 22-04-2016 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 13 810 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 7.5E-297 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 PANTHER PTHR11468:SF3 14 814 0.0 T 22-04-2016 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 Gene3D G3DSA:3.40.50.2000 11 477 8.3E-187 T 22-04-2016 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 PANTHER PTHR11468 14 814 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS00275 527e700479a04ab6561226152ef5b8d0 815 PIRSF PIRSF000460 1 815 6.1E-240 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 HMPREF9228_RS03070 8291877b029fa8ca7ab8dff8cc6c8547 330 Pfam PF02401 LytB protein 5 300 3.8E-83 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 HMPREF9228_RS03070 8291877b029fa8ca7ab8dff8cc6c8547 330 PANTHER PTHR30426 3 328 1.9E-125 T 22-04-2016 HMPREF9228_RS03070 8291877b029fa8ca7ab8dff8cc6c8547 330 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5 302 1.0E-85 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 HMPREF9228_RS03070 8291877b029fa8ca7ab8dff8cc6c8547 330 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 3 304 36.982 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 HMPREF9228_RS07990 27551d2f6feb33c3d1c6e5b770b30b9f 347 Gene3D G3DSA:3.30.420.10 13 134 4.3E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07990 27551d2f6feb33c3d1c6e5b770b30b9f 347 Pfam PF00075 RNase H 22 132 4.2E-27 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 HMPREF9228_RS07990 27551d2f6feb33c3d1c6e5b770b30b9f 347 PANTHER PTHR10642 31 131 2.3E-33 T 22-04-2016 HMPREF9228_RS07990 27551d2f6feb33c3d1c6e5b770b30b9f 347 SUPERFAMILY SSF53098 23 134 7.46E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07990 27551d2f6feb33c3d1c6e5b770b30b9f 347 PANTHER PTHR10642:SF0 31 131 2.3E-33 T 22-04-2016 HMPREF9228_RS07650 2da55b6911a41679864ca9cc324f1338 437 Gene3D G3DSA:3.40.50.300 135 207 2.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07650 2da55b6911a41679864ca9cc324f1338 437 Gene3D G3DSA:3.40.50.300 247 382 2.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07650 2da55b6911a41679864ca9cc324f1338 437 Gene3D G3DSA:3.40.50.300 1 94 2.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07650 2da55b6911a41679864ca9cc324f1338 437 SUPERFAMILY SSF52540 204 376 2.12E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07650 2da55b6911a41679864ca9cc324f1338 437 SUPERFAMILY SSF52540 1 147 2.12E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07650 2da55b6911a41679864ca9cc324f1338 437 Pfam PF13175 AAA ATPase domain 1 370 2.3E-18 T 22-04-2016 HMPREF9228_RS06400 9ab9d34457eda7154f4f8e25ae854942 147 Gene3D G3DSA:3.40.50.300 1 132 3.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06400 9ab9d34457eda7154f4f8e25ae854942 147 Pfam PF00005 ABC transporter 2 80 3.3E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS06400 9ab9d34457eda7154f4f8e25ae854942 147 PANTHER PTHR24220:SF577 1 142 7.0E-57 T 22-04-2016 HMPREF9228_RS06400 9ab9d34457eda7154f4f8e25ae854942 147 SUPERFAMILY SSF52540 1 134 6.04E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06400 9ab9d34457eda7154f4f8e25ae854942 147 PANTHER PTHR24220 1 142 7.0E-57 T 22-04-2016 HMPREF9228_RS05040 de814895304a7002756264674690d3e9 138 Hamap MF_00048 UPF0102 protein YraN [yraN]. 22 135 22.295 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 HMPREF9228_RS05040 de814895304a7002756264674690d3e9 138 SUPERFAMILY SSF52980 23 126 6.84E-19 T 22-04-2016 IPR011335 Restriction endonuclease type II-like HMPREF9228_RS05040 de814895304a7002756264674690d3e9 138 PANTHER PTHR34039 18 138 1.2E-34 T 22-04-2016 HMPREF9228_RS05040 de814895304a7002756264674690d3e9 138 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 23 123 1.3E-25 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 HMPREF9228_RS05040 de814895304a7002756264674690d3e9 138 PANTHER PTHR34039:SF1 18 138 1.2E-34 T 22-04-2016 HMPREF9228_RS05040 de814895304a7002756264674690d3e9 138 Gene3D G3DSA:3.40.1350.10 28 138 3.7E-34 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 HMPREF9228_RS05040 de814895304a7002756264674690d3e9 138 Pfam PF02021 Uncharacterised protein family UPF0102 29 122 4.4E-28 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 HMPREF9228_RS07940 4252fb0f834c916e2ec58b4fd14e65c0 438 PANTHER PTHR30061 6 423 5.1E-46 T 22-04-2016 HMPREF9228_RS07940 4252fb0f834c916e2ec58b4fd14e65c0 438 Gene3D G3DSA:3.40.190.10 327 359 4.4E-30 T 22-04-2016 HMPREF9228_RS07940 4252fb0f834c916e2ec58b4fd14e65c0 438 Gene3D G3DSA:3.40.190.10 41 162 4.4E-30 T 22-04-2016 HMPREF9228_RS07940 4252fb0f834c916e2ec58b4fd14e65c0 438 SUPERFAMILY SSF53850 23 424 4.46E-54 T 22-04-2016 HMPREF9228_RS07940 4252fb0f834c916e2ec58b4fd14e65c0 438 Pfam PF01547 Bacterial extracellular solute-binding protein 59 338 2.7E-26 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 HMPREF9228_RS07940 4252fb0f834c916e2ec58b4fd14e65c0 438 Gene3D G3DSA:3.40.190.10 163 326 2.0E-22 T 22-04-2016 HMPREF9228_RS02380 36fdfe3f8bdbc615c34196325b8fdb96 854 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 558 841 5.8E-26 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD HMPREF9228_RS02380 36fdfe3f8bdbc615c34196325b8fdb96 854 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 558 848 4.1E-14 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD HMPREF9228_RS08550 ac6ba64a2240363d1f0f93affc9daf8e 447 SUPERFAMILY SSF54001 12 446 2.88E-107 T 22-04-2016 HMPREF9228_RS08550 ac6ba64a2240363d1f0f93affc9daf8e 447 PANTHER PTHR10363 1 447 1.9E-157 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS08550 ac6ba64a2240363d1f0f93affc9daf8e 447 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 66 77 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site HMPREF9228_RS08550 ac6ba64a2240363d1f0f93affc9daf8e 447 Gene3D G3DSA:3.90.70.10 54 447 4.4E-143 T 22-04-2016 HMPREF9228_RS08550 ac6ba64a2240363d1f0f93affc9daf8e 447 PIRSF PIRSF005700 4 447 5.9E-158 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS08550 ac6ba64a2240363d1f0f93affc9daf8e 447 Pfam PF03051 Peptidase C1-like family 7 444 4.7E-140 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS01055 0b4f0892b02ab8704231d95bbf427229 215 PANTHER PTHR38096 40 215 6.1E-20 T 22-04-2016 HMPREF9228_RS01055 0b4f0892b02ab8704231d95bbf427229 215 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 113 201 3.4E-9 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS01055 0b4f0892b02ab8704231d95bbf427229 215 SUPERFAMILY SSF56214 110 194 2.96E-8 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS01055 0b4f0892b02ab8704231d95bbf427229 215 Gene3D G3DSA:3.90.470.20 113 201 1.1E-4 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS01055 0b4f0892b02ab8704231d95bbf427229 215 PRINTS PR01399 Enterobactin synthetase component D signature 150 166 4.6E-16 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 HMPREF9228_RS01055 0b4f0892b02ab8704231d95bbf427229 215 PRINTS PR01399 Enterobactin synthetase component D signature 49 69 4.6E-16 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 HMPREF9228_RS01055 0b4f0892b02ab8704231d95bbf427229 215 PRINTS PR01399 Enterobactin synthetase component D signature 78 96 4.6E-16 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 Pfam PF14310 Fibronectin type III-like domain 448 522 3.4E-16 T 22-04-2016 IPR026891 Fibronectin type III-like domain HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 841 858 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 SUPERFAMILY SSF51445 634 916 2.42E-62 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 Gene3D G3DSA:3.40.50.1700 388 414 6.8E-31 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 Gene3D G3DSA:3.40.50.1700 207 343 6.8E-31 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 Gene3D G3DSA:3.40.50.1700 99 172 6.8E-31 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 691 883 7.4E-41 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 PANTHER PTHR30620:SF18 639 874 6.2E-64 T 22-04-2016 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 PANTHER PTHR30620 639 874 6.2E-64 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 SUPERFAMILY SSF52279 404 418 1.7E-24 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 SUPERFAMILY SSF52279 230 343 1.7E-24 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 SUPERFAMILY SSF52279 110 178 1.7E-24 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 Gene3D G3DSA:3.20.20.300 638 905 7.2E-63 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 PRINTS PR00133 Glycosyl hydrolase family 3 signature 739 755 6.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 PRINTS PR00133 Glycosyl hydrolase family 3 signature 770 786 6.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 PRINTS PR00133 Glycosyl hydrolase family 3 signature 693 712 6.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 PRINTS PR00133 Glycosyl hydrolase family 3 signature 841 859 6.8E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 109 387 1.1E-21 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 SMART SM01217 448 522 1.1E-18 T 22-04-2016 IPR026891 Fibronectin type III-like domain HMPREF9228_RS09675 e9eb79713a286613e9b4c44971cf3198 967 Gene3D G3DSA:2.60.40.360 420 508 3.0E-4 T 22-04-2016 IPR008962 PapD-like HMPREF9228_RS04420 4adcb6ef616bbfb3a3abd1659bd0bd85 195 SUPERFAMILY SSF52833 18 176 1.08E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS04420 4adcb6ef616bbfb3a3abd1659bd0bd85 195 PIRSF PIRSF000239 15 186 1.9E-20 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 HMPREF9228_RS04420 4adcb6ef616bbfb3a3abd1659bd0bd85 195 Gene3D G3DSA:3.40.30.10 13 177 1.3E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS04420 4adcb6ef616bbfb3a3abd1659bd0bd85 195 PANTHER PTHR10681 1 175 6.0E-45 T 22-04-2016 HMPREF9228_RS04420 4adcb6ef616bbfb3a3abd1659bd0bd85 195 Pfam PF00578 AhpC/TSA family 22 155 5.1E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 HMPREF9228_RS05650 98b63537b00683fc3cefd7b7a5715fe7 64 Gene3D G3DSA:3.10.20.30 1 64 4.8E-21 T 22-04-2016 IPR012675 Beta-grasp domain HMPREF9228_RS05650 98b63537b00683fc3cefd7b7a5715fe7 64 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 1 64 1.6E-22 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis HMPREF9228_RS05650 98b63537b00683fc3cefd7b7a5715fe7 64 SUPERFAMILY SSF54285 1 63 1.48E-15 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp HMPREF9228_RS05650 98b63537b00683fc3cefd7b7a5715fe7 64 PANTHER PTHR34472 1 64 5.7E-18 T 22-04-2016 HMPREF9228_RS05650 98b63537b00683fc3cefd7b7a5715fe7 64 PANTHER PTHR34472:SF1 1 64 5.7E-18 T 22-04-2016 HMPREF9228_RS05650 98b63537b00683fc3cefd7b7a5715fe7 64 Pfam PF02597 ThiS family 2 64 2.0E-12 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 SUPERFAMILY SSF52279 386 465 1.18E-39 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 SUPERFAMILY SSF52279 500 665 1.18E-39 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 Gene3D G3DSA:3.20.20.300 14 359 1.1E-113 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PANTHER PTHR30620 492 787 5.2E-244 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PANTHER PTHR30620 12 472 5.2E-244 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PRINTS PR00133 Glycosyl hydrolase family 3 signature 85 101 1.3E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PRINTS PR00133 Glycosyl hydrolase family 3 signature 266 284 1.3E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PRINTS PR00133 Glycosyl hydrolase family 3 signature 196 212 1.3E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PRINTS PR00133 Glycosyl hydrolase family 3 signature 109 128 1.3E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PRINTS PR00133 Glycosyl hydrolase family 3 signature 155 171 1.3E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 Pfam PF14310 Fibronectin type III-like domain 705 774 2.2E-17 T 22-04-2016 IPR026891 Fibronectin type III-like domain HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 Gene3D G3DSA:3.40.50.1700 499 665 3.8E-65 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 Gene3D G3DSA:3.40.50.1700 371 464 3.8E-65 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 SUPERFAMILY SSF51445 14 384 7.58E-108 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 SMART SM01217 705 774 1.2E-24 T 22-04-2016 IPR026891 Fibronectin type III-like domain HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 386 662 3.5E-42 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 35 345 5.1E-69 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PANTHER PTHR30620:SF37 492 787 5.2E-244 T 22-04-2016 HMPREF9228_RS07190 88713d7c89a125fb9b8c3f96c987e9f8 787 PANTHER PTHR30620:SF37 12 472 5.2E-244 T 22-04-2016 HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 Gene3D G3DSA:3.40.50.880 25 211 3.5E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 SUPERFAMILY SSF52317 24 211 6.16E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 PIRSF PIRSF005639 18 212 2.0E-58 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 Pfam PF01174 SNO glutamine amidotransferase family 26 210 3.4E-50 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 ProSitePatterns PS01236 PdxT/SNO family family signature. 62 72 - T 22-04-2016 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 24 212 33.476 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 24 210 4.9E-62 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 PANTHER PTHR31559 13 212 4.8E-68 T 22-04-2016 HMPREF9228_RS06520 1f7e490d284aebb518b8ad316bff2f79 212 PANTHER PTHR31559:SF0 13 212 4.8E-68 T 22-04-2016 HMPREF9228_RS06840 6e74fab24f92a03f03773a387e259702 385 PANTHER PTHR12561 154 375 2.8E-60 T 22-04-2016 HMPREF9228_RS06840 6e74fab24f92a03f03773a387e259702 385 SUPERFAMILY SSF55681 157 376 2.77E-58 T 22-04-2016 HMPREF9228_RS06840 6e74fab24f92a03f03773a387e259702 385 Gene3D G3DSA:3.90.1550.10 153 375 1.5E-60 T 22-04-2016 HMPREF9228_RS06840 6e74fab24f92a03f03773a387e259702 385 PANTHER PTHR12561:SF7 154 375 2.8E-60 T 22-04-2016 HMPREF9228_RS06840 6e74fab24f92a03f03773a387e259702 385 Pfam PF03099 Biotin/lipoate A/B protein ligase family 204 307 1.0E-7 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 HMPREF9228_RS02825 6d9978f05ce3819855e118ba22165d7f 386 PANTHER PTHR11751 9 381 7.2E-84 T 22-04-2016 HMPREF9228_RS02825 6d9978f05ce3819855e118ba22165d7f 386 Gene3D G3DSA:3.40.640.10 48 280 6.0E-63 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS02825 6d9978f05ce3819855e118ba22165d7f 386 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 380 51.823 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 HMPREF9228_RS02825 6d9978f05ce3819855e118ba22165d7f 386 Gene3D G3DSA:3.90.1150.10 281 380 8.1E-14 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS02825 6d9978f05ce3819855e118ba22165d7f 386 SUPERFAMILY SSF53383 29 380 8.74E-68 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS02825 6d9978f05ce3819855e118ba22165d7f 386 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 237 246 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 HMPREF9228_RS02825 6d9978f05ce3819855e118ba22165d7f 386 Pfam PF00155 Aminotransferase class I and II 31 375 5.0E-50 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS02825 6d9978f05ce3819855e118ba22165d7f 386 PANTHER PTHR11751:SF398 9 381 7.2E-84 T 22-04-2016 HMPREF9228_RS03635 5973ef4a3f4431a91138e431e105252a 429 Gene3D G3DSA:3.30.565.10 305 416 1.0E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS03635 5973ef4a3f4431a91138e431e105252a 429 Pfam PF07730 Histidine kinase 213 274 2.2E-12 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 HMPREF9228_RS03635 5973ef4a3f4431a91138e431e105252a 429 SUPERFAMILY SSF55874 296 415 4.3E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS03635 5973ef4a3f4431a91138e431e105252a 429 PANTHER PTHR24421 75 428 2.6E-32 T 22-04-2016 HMPREF9228_RS03635 5973ef4a3f4431a91138e431e105252a 429 PANTHER PTHR24421:SF26 75 428 2.6E-32 T 22-04-2016 HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 SUPERFAMILY SSF56112 12 329 1.48E-57 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 Gene3D G3DSA:1.10.510.10 81 270 3.1E-38 T 22-04-2016 HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 20 43 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 PANTHER PTHR24362:SF160 13 271 4.6E-51 T 22-04-2016 HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 Pfam PF00069 Protein kinase domain 14 274 5.0E-39 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 SMART SM00220 14 275 2.5E-40 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 Gene3D G3DSA:3.30.200.20 10 80 3.1E-13 T 22-04-2016 HMPREF9228_RS06745 656c80f18c6ac8f1d82d8a81a8983036 382 PANTHER PTHR24362 13 271 4.6E-51 T 22-04-2016 HMPREF9228_RS02975 364f2dfdde8da546a05e64c254a6f01b 162 SUPERFAMILY SSF69500 1 153 7.72E-51 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain HMPREF9228_RS02975 364f2dfdde8da546a05e64c254a6f01b 162 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 152 9.6E-51 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 HMPREF9228_RS02975 364f2dfdde8da546a05e64c254a6f01b 162 PANTHER PTHR10472 2 153 2.1E-63 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 HMPREF9228_RS02975 364f2dfdde8da546a05e64c254a6f01b 162 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 153 33.388 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 HMPREF9228_RS02975 364f2dfdde8da546a05e64c254a6f01b 162 Gene3D G3DSA:3.50.80.10 1 153 2.1E-56 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain HMPREF9228_RS02975 364f2dfdde8da546a05e64c254a6f01b 162 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 153 5.7E-50 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 HMPREF9228_RS08730 cfa0ce718dab03f46256959f0b1c6221 401 Gene3D G3DSA:3.90.1150.10 278 399 2.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS08730 cfa0ce718dab03f46256959f0b1c6221 401 PANTHER PTHR11751 17 398 6.9E-144 T 22-04-2016 HMPREF9228_RS08730 cfa0ce718dab03f46256959f0b1c6221 401 Pfam PF00155 Aminotransferase class I and II 35 395 2.5E-73 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS08730 cfa0ce718dab03f46256959f0b1c6221 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 HMPREF9228_RS08730 cfa0ce718dab03f46256959f0b1c6221 401 SUPERFAMILY SSF53383 6 400 2.48E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS08730 cfa0ce718dab03f46256959f0b1c6221 401 Gene3D G3DSA:3.40.640.10 48 277 2.1E-75 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS08730 cfa0ce718dab03f46256959f0b1c6221 401 PANTHER PTHR11751:SF306 17 398 6.9E-144 T 22-04-2016 HMPREF9228_RS00725 e7aab7aa0eb6d949556de8a3997e3515 407 TIGRFAM TIGR01076 sortase_fam: sortase 196 324 5.0E-49 T 22-04-2016 IPR005754 Sortase family HMPREF9228_RS00725 e7aab7aa0eb6d949556de8a3997e3515 407 Pfam PF04203 Sortase family 198 322 4.8E-23 T 22-04-2016 IPR005754 Sortase family HMPREF9228_RS00725 e7aab7aa0eb6d949556de8a3997e3515 407 PANTHER PTHR33393:SF5 194 323 6.2E-19 T 22-04-2016 HMPREF9228_RS00725 e7aab7aa0eb6d949556de8a3997e3515 407 PANTHER PTHR33393 194 323 6.2E-19 T 22-04-2016 HMPREF9228_RS00725 e7aab7aa0eb6d949556de8a3997e3515 407 SUPERFAMILY SSF63817 190 324 2.62E-44 T 22-04-2016 IPR023365 Sortase domain HMPREF9228_RS00725 e7aab7aa0eb6d949556de8a3997e3515 407 Gene3D G3DSA:2.40.260.10 187 324 1.6E-49 T 22-04-2016 IPR023365 Sortase domain HMPREF9228_RS08400 8351f60839fbebd3940fac71d71b90ef 61 PANTHER PTHR34404:SF2 2 57 1.7E-17 T 22-04-2016 HMPREF9228_RS08400 8351f60839fbebd3940fac71d71b90ef 61 PANTHER PTHR34404 2 57 1.7E-17 T 22-04-2016 HMPREF9228_RS08400 8351f60839fbebd3940fac71d71b90ef 61 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 2 52 3.9E-18 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain HMPREF9228_RS08400 8351f60839fbebd3940fac71d71b90ef 61 Gene3D G3DSA:2.20.28.10 5 36 1.7E-4 T 22-04-2016 IPR004039 Rubredoxin-type fold HMPREF9228_RS08400 8351f60839fbebd3940fac71d71b90ef 61 Pfam PF09723 Zinc ribbon domain 2 40 3.2E-13 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain HMPREF9228_RS08400 8351f60839fbebd3940fac71d71b90ef 61 SMART SM00834 2 42 1.5E-12 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 PANTHER PTHR23500 15 472 8.0E-143 T 22-04-2016 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 PRINTS PR00171 Sugar transporter signature 375 396 7.2E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 PRINTS PR00171 Sugar transporter signature 398 410 7.2E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 PRINTS PR00171 Sugar transporter signature 112 131 7.2E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 PRINTS PR00171 Sugar transporter signature 26 36 7.2E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 PRINTS PR00171 Sugar transporter signature 278 288 7.2E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 ProSitePatterns PS00217 Sugar transport proteins signature 2. 117 142 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 Gene3D G3DSA:1.20.1250.20 270 470 7.8E-21 T 22-04-2016 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 PANTHER PTHR23500:SF22 15 472 8.0E-143 T 22-04-2016 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 13 469 2.2E-92 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 Gene3D G3DSA:1.20.1250.20 23 211 6.7E-24 T 22-04-2016 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 ProSitePatterns PS00216 Sugar transport proteins signature 1. 322 339 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 SUPERFAMILY SSF103473 9 470 4.58E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02495 e6294a46a12b700ca6329dc22d0b1dd8 474 Pfam PF00083 Sugar (and other) transporter 18 472 3.3E-98 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 HMPREF9228_RS03560 ccc30a7705347320f0e3e61d87f440ea 134 Gene3D G3DSA:2.30.110.10 1 118 4.1E-29 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 HMPREF9228_RS03560 ccc30a7705347320f0e3e61d87f440ea 134 SUPERFAMILY SSF50475 4 101 1.34E-13 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 HMPREF9228_RS03560 ccc30a7705347320f0e3e61d87f440ea 134 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 4 89 6.9E-12 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 HMPREF9228_RS03560 ccc30a7705347320f0e3e61d87f440ea 134 PANTHER PTHR40660 1 132 2.4E-16 T 22-04-2016 HMPREF9228_RS06860 e48d10c9cca97d12fa9b98a582398d61 133 SUPERFAMILY SSF51230 13 132 9.79E-38 T 22-04-2016 IPR011053 Single hybrid motif HMPREF9228_RS06860 e48d10c9cca97d12fa9b98a582398d61 133 PANTHER PTHR11715:SF3 10 133 1.7E-44 T 22-04-2016 HMPREF9228_RS06860 e48d10c9cca97d12fa9b98a582398d61 133 Pfam PF01597 Glycine cleavage H-protein 17 132 3.3E-36 T 22-04-2016 IPR002930 Glycine cleavage system H-protein HMPREF9228_RS06860 e48d10c9cca97d12fa9b98a582398d61 133 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 57 86 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site HMPREF9228_RS06860 e48d10c9cca97d12fa9b98a582398d61 133 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 13 132 7.7E-39 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 HMPREF9228_RS06860 e48d10c9cca97d12fa9b98a582398d61 133 PANTHER PTHR11715 10 133 1.7E-44 T 22-04-2016 IPR002930 Glycine cleavage system H-protein HMPREF9228_RS06860 e48d10c9cca97d12fa9b98a582398d61 133 Gene3D G3DSA:2.40.50.100 16 132 1.3E-41 T 22-04-2016 HMPREF9228_RS06860 e48d10c9cca97d12fa9b98a582398d61 133 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 14 133 27.077 T 22-04-2016 IPR002930 Glycine cleavage system H-protein HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 325 779 2.4E-127 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 Pfam PF03477 ATP cone domain 26 116 1.1E-17 T 22-04-2016 IPR005144 ATP-cone domain HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 ProSitePatterns PS00850 Glycine radical domain signature. 750 758 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 SUPERFAMILY SSF51998 147 283 1.04E-174 T 22-04-2016 HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 SUPERFAMILY SSF51998 329 759 1.04E-174 T 22-04-2016 HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 Gene3D G3DSA:3.20.70.20 319 759 2.6E-167 T 22-04-2016 HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 Gene3D G3DSA:3.20.70.20 149 273 2.6E-167 T 22-04-2016 HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 142 779 3.9E-171 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 PANTHER PTHR21075 322 785 1.1E-227 T 22-04-2016 HMPREF9228_RS07215 297cc89ebe8feef1fa805a1c1bf8a3d7 802 PANTHER PTHR21075 16 276 1.1E-227 T 22-04-2016 HMPREF9228_RS04585 b2fd4211d371e687f6fe1c6afe56bcff 424 Gene3D G3DSA:3.40.640.10 35 298 3.4E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS04585 b2fd4211d371e687f6fe1c6afe56bcff 424 Gene3D G3DSA:3.90.1150.10 299 414 2.1E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS04585 b2fd4211d371e687f6fe1c6afe56bcff 424 Pfam PF00266 Aminotransferase class-V 24 410 4.9E-120 T 22-04-2016 IPR000192 Aminotransferase class V domain HMPREF9228_RS04585 b2fd4211d371e687f6fe1c6afe56bcff 424 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 422 3.9E-172 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 HMPREF9228_RS04585 b2fd4211d371e687f6fe1c6afe56bcff 424 PANTHER PTHR11601 6 421 2.7E-152 T 22-04-2016 HMPREF9228_RS04585 b2fd4211d371e687f6fe1c6afe56bcff 424 PANTHER PTHR11601:SF17 6 421 2.7E-152 T 22-04-2016 HMPREF9228_RS04585 b2fd4211d371e687f6fe1c6afe56bcff 424 SUPERFAMILY SSF53383 3 413 4.55E-109 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS04585 b2fd4211d371e687f6fe1c6afe56bcff 424 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 231 250 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site HMPREF9228_RS06680 ee1e43b1e49e9ef302772d45f4c049a1 307 PIRSF PIRSF003097 1 307 2.3E-56 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 HMPREF9228_RS06680 ee1e43b1e49e9ef302772d45f4c049a1 307 Pfam PF02687 FtsX-like permease family 188 304 4.3E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS07365 4bb19f65bb879af735ed2fd62abf5e4f 287 PANTHER PTHR24220 10 260 5.4E-117 T 22-04-2016 HMPREF9228_RS07365 4bb19f65bb879af735ed2fd62abf5e4f 287 PANTHER PTHR24220:SF358 10 260 5.4E-117 T 22-04-2016 HMPREF9228_RS07365 4bb19f65bb879af735ed2fd62abf5e4f 287 SUPERFAMILY SSF52540 7 257 6.23E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07365 4bb19f65bb879af735ed2fd62abf5e4f 287 SMART SM00382 33 233 3.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07365 4bb19f65bb879af735ed2fd62abf5e4f 287 Pfam PF00005 ABC transporter 25 184 2.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07365 4bb19f65bb879af735ed2fd62abf5e4f 287 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 256 5.1E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal HMPREF9228_RS07365 4bb19f65bb879af735ed2fd62abf5e4f 287 Gene3D G3DSA:3.40.50.300 5 255 2.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 PRINTS PR00340 P-II protein signature 23 41 3.3E-33 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 PRINTS PR00340 P-II protein signature 2 17 3.3E-33 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 PRINTS PR00340 P-II protein signature 83 103 3.3E-33 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 PRINTS PR00340 P-II protein signature 52 75 3.3E-33 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 SUPERFAMILY SSF54913 1 112 2.95E-40 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-37 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 SMART SM00938 4 105 2.1E-56 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 Gene3D G3DSA:3.30.70.120 1 112 1.8E-43 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal HMPREF9228_RS01225 21118418c212aa736f057f84f84b87fa 112 PANTHER PTHR30115 1 112 8.0E-53 T 22-04-2016 HMPREF9228_RS06195 5b988959fd415fd4ec4a71320c3de471 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.603 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06195 5b988959fd415fd4ec4a71320c3de471 156 PANTHER PTHR11205 1 156 9.0E-86 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 HMPREF9228_RS06195 5b988959fd415fd4ec4a71320c3de471 156 SUPERFAMILY SSF47973 1 149 7.06E-59 T 22-04-2016 IPR023798 Ribosomal protein S7 domain HMPREF9228_RS06195 5b988959fd415fd4ec4a71320c3de471 156 PIRSF PIRSF002122 3 156 4.0E-59 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 HMPREF9228_RS06195 5b988959fd415fd4ec4a71320c3de471 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 HMPREF9228_RS06195 5b988959fd415fd4ec4a71320c3de471 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.4E-66 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS06195 5b988959fd415fd4ec4a71320c3de471 156 Gene3D G3DSA:1.10.455.10 8 156 2.2E-63 T 22-04-2016 IPR023798 Ribosomal protein S7 domain HMPREF9228_RS06195 5b988959fd415fd4ec4a71320c3de471 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.7E-63 T 22-04-2016 IPR023798 Ribosomal protein S7 domain HMPREF9228_RS02610 d37d24178672ddd7c1e4a7ea305452c1 101 SMART SM01103 3 86 2.6E-37 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 HMPREF9228_RS02610 d37d24178672ddd7c1e4a7ea305452c1 101 Gene3D G3DSA:3.30.110.60 1 94 5.2E-27 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 HMPREF9228_RS02610 d37d24178672ddd7c1e4a7ea305452c1 101 PANTHER PTHR31846 1 91 4.9E-15 T 22-04-2016 HMPREF9228_RS02610 d37d24178672ddd7c1e4a7ea305452c1 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 94 1.0E-30 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 HMPREF9228_RS02610 d37d24178672ddd7c1e4a7ea305452c1 101 SUPERFAMILY SSF75471 1 92 2.09E-26 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 HMPREF9228_RS02610 d37d24178672ddd7c1e4a7ea305452c1 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 2.6E-20 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 PANTHER PTHR24220 22 262 2.1E-120 T 22-04-2016 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 PANTHER PTHR24220 303 330 2.1E-120 T 22-04-2016 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 PANTHER PTHR24220 349 458 2.1E-120 T 22-04-2016 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 PANTHER PTHR24220:SF589 22 262 2.1E-120 T 22-04-2016 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 PANTHER PTHR24220:SF589 303 330 2.1E-120 T 22-04-2016 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 PANTHER PTHR24220:SF589 349 458 2.1E-120 T 22-04-2016 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 Pfam PF00005 ABC transporter 41 180 3.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 SUPERFAMILY SSF52540 21 262 5.02E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 SMART SM00382 50 248 1.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 Gene3D G3DSA:3.40.50.300 15 240 1.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02035 c09e325c514cf8ab57a68976dae56df5 472 Pfam PF09821 C-terminal AAA-associated domain 340 457 9.5E-34 T 22-04-2016 IPR018632 C-terminal AAA-associated domain HMPREF9228_RS04075 57a948c2fa97ead3d106baf19f4c14bb 194 PANTHER PTHR23089:SF16 3 189 3.5E-66 T 22-04-2016 HMPREF9228_RS04075 57a948c2fa97ead3d106baf19f4c14bb 194 PANTHER PTHR23089 3 189 3.5E-66 T 22-04-2016 IPR001310 Histidine triad (HIT) protein HMPREF9228_RS04075 57a948c2fa97ead3d106baf19f4c14bb 194 Pfam PF01230 HIT domain 67 150 1.8E-10 T 22-04-2016 IPR001310 Histidine triad (HIT) protein HMPREF9228_RS04075 57a948c2fa97ead3d106baf19f4c14bb 194 SUPERFAMILY SSF54197 20 176 5.25E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 HMPREF9228_RS04075 57a948c2fa97ead3d106baf19f4c14bb 194 Gene3D G3DSA:3.30.428.10 40 184 1.2E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 SMART SM00354 1 63 1.8E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 SUPERFAMILY SSF47413 1 47 8.26E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 SUPERFAMILY SSF53822 102 328 3.85E-32 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 4.5E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 Gene3D G3DSA:1.10.260.40 1 47 6.4E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 PANTHER PTHR30146 1 334 5.2E-53 T 22-04-2016 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 Pfam PF13377 Periplasmic binding protein-like domain 160 328 4.2E-33 T 22-04-2016 HMPREF9228_RS07745 21e326be9ebbe1c64923d9008ca8f20f 336 Gene3D G3DSA:3.40.50.2300 144 328 1.1E-34 T 22-04-2016 HMPREF9228_RS06120 c24c62a81b10bd14798fb83ffe3e638e 361 SUPERFAMILY SSF52266 123 354 3.0E-11 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS06120 c24c62a81b10bd14798fb83ffe3e638e 361 PANTHER PTHR37834 4 361 4.6E-20 T 22-04-2016 HMPREF9228_RS06120 c24c62a81b10bd14798fb83ffe3e638e 361 Gene3D G3DSA:3.40.50.1110 128 305 8.0E-7 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS06120 c24c62a81b10bd14798fb83ffe3e638e 361 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 132 298 9.1E-7 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS08755 245454523163818746fb214b0cb3ba44 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.8E-22 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08755 245454523163818746fb214b0cb3ba44 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08755 245454523163818746fb214b0cb3ba44 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 17.461 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08755 245454523163818746fb214b0cb3ba44 102 PANTHER PTHR21349 1 102 1.5E-25 T 22-04-2016 HMPREF9228_RS08755 245454523163818746fb214b0cb3ba44 102 SUPERFAMILY SSF141091 1 101 1.96E-27 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 HMPREF9228_RS08755 245454523163818746fb214b0cb3ba44 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.2E-28 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 Gene3D G3DSA:3.30.420.40 277 357 8.2E-4 T 22-04-2016 HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 PANTHER PTHR18964:SF123 59 359 2.7E-49 T 22-04-2016 HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 PANTHER PTHR18964 59 359 2.7E-49 T 22-04-2016 HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 Gene3D G3DSA:1.10.10.10 9 78 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 Gene3D G3DSA:3.30.420.40 216 273 6.7E-24 T 22-04-2016 HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 SUPERFAMILY SSF46785 10 75 1.54E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 Pfam PF00480 ROK family 132 352 7.5E-37 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 Gene3D G3DSA:3.30.420.40 85 215 1.7E-29 T 22-04-2016 HMPREF9228_RS07760 6f9838447c4ba3fcbb34d3884df2f086 391 SUPERFAMILY SSF53067 85 356 7.02E-38 T 22-04-2016 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 1.0E-23 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 Gene3D G3DSA:3.30.930.10 104 419 1.3E-111 T 22-04-2016 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 SUPERFAMILY SSF55681 130 421 3.04E-76 T 22-04-2016 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 398 1.6E-24 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 PANTHER PTHR11778 1 423 2.3E-200 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 420 37.751 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 Gene3D G3DSA:1.10.287.40 1 102 3.2E-26 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 7.4E-30 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 7.4E-30 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 7.4E-30 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 7.4E-30 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 7.4E-30 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 1.5E-127 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 SUPERFAMILY SSF46589 1 111 1.62E-21 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 PANTHER PTHR11778:SF8 1 423 2.3E-200 T 22-04-2016 HMPREF9228_RS07950 4be87df92493c2a4185851d62391f532 428 PIRSF PIRSF001529 1 424 6.1E-134 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 HMPREF9228_RS01755 6fcbbadc4475183c87daaf374262acd0 149 Gene3D G3DSA:3.90.470.20 4 140 2.6E-38 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS01755 6fcbbadc4475183c87daaf374262acd0 149 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 5 140 3.4E-19 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS01755 6fcbbadc4475183c87daaf374262acd0 149 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 141 17.734 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS01755 6fcbbadc4475183c87daaf374262acd0 149 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 140 2.0E-8 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS01755 6fcbbadc4475183c87daaf374262acd0 149 SUPERFAMILY SSF56214 4 140 3.66E-16 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS01755 6fcbbadc4475183c87daaf374262acd0 149 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 119 7.4E-15 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 HMPREF9228_RS04270 a1b35e650fda3ddb83d50f5549f7cf6d 231 Pfam PF00156 Phosphoribosyl transferase domain 42 184 2.0E-24 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 HMPREF9228_RS04270 a1b35e650fda3ddb83d50f5549f7cf6d 231 PANTHER PTHR19278:SF36 8 230 2.1E-65 T 22-04-2016 HMPREF9228_RS04270 a1b35e650fda3ddb83d50f5549f7cf6d 231 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 231 28.225 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS04270 a1b35e650fda3ddb83d50f5549f7cf6d 231 SUPERFAMILY SSF53271 5 199 8.03E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS04270 a1b35e650fda3ddb83d50f5549f7cf6d 231 PANTHER PTHR19278 8 230 2.1E-65 T 22-04-2016 HMPREF9228_RS04270 a1b35e650fda3ddb83d50f5549f7cf6d 231 Gene3D G3DSA:3.40.50.2020 8 230 9.8E-69 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS04270 a1b35e650fda3ddb83d50f5549f7cf6d 231 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 197 7.5E-46 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 ProSitePatterns PS00177 DNA topoisomerase II signature. 478 486 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 SMART SM00387 62 209 4.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 SUPERFAMILY SSF56719 450 691 2.35E-80 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PANTHER PTHR10169 14 695 5.6E-266 T 22-04-2016 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 272 294 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 368 384 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 214 229 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 649 661 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 416 430 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 526 535 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 665 681 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 298 316 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 430 450 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 37 47 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR01159 DNA gyrase subunit B signature 229 242 4.0E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 34 696 81.826 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 Pfam PF01751 Toprim domain 475 584 3.7E-13 T 22-04-2016 IPR006171 Toprim domain HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 37 695 3.9E-270 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 Gene3D G3DSA:3.30.230.10 272 446 9.6E-70 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 SUPERFAMILY SSF55874 37 243 2.05E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 64 208 4.3E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 SMART SM00433 66 689 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 628 685 2.3E-27 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 Gene3D G3DSA:3.30.565.10 37 246 8.7E-84 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 SUPERFAMILY SSF54211 273 446 4.55E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 Gene3D G3DSA:3.40.50.670 460 678 1.8E-84 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 Pfam PF00204 DNA gyrase B 273 446 1.9E-61 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 580 592 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 66 81 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 324 337 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 560 577 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 144 158 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 628 644 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 542 558 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 101 114 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00025 0b2789faccd16c0c87572b9c84f62127 696 PRINTS PR00418 DNA topoisomerase II family signature 476 490 1.8E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 HMPREF9228_RS00155 c853efa7eb8658162d36b8c4f9cce146 274 Pfam PF09359 VTC domain 31 252 1.7E-20 T 22-04-2016 IPR018966 VTC domain HMPREF9228_RS04660 b35b6422e8948dac13a95438f4a2398c 224 SUPERFAMILY SSF53254 2 214 7.5E-44 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS04660 b35b6422e8948dac13a95438f4a2398c 224 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 214 1.5E-26 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS04660 b35b6422e8948dac13a95438f4a2398c 224 SMART SM00855 4 182 2.3E-17 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS04660 b35b6422e8948dac13a95438f4a2398c 224 PANTHER PTHR23029 1 208 5.2E-29 T 22-04-2016 HMPREF9228_RS04660 b35b6422e8948dac13a95438f4a2398c 224 PANTHER PTHR23029:SF29 1 208 5.2E-29 T 22-04-2016 HMPREF9228_RS04660 b35b6422e8948dac13a95438f4a2398c 224 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 HMPREF9228_RS04660 b35b6422e8948dac13a95438f4a2398c 224 Gene3D G3DSA:3.40.50.1240 3 221 2.5E-47 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 SUPERFAMILY SSF46894 135 230 5.39E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 Gene3D G3DSA:3.40.50.2300 2 124 7.6E-43 T 22-04-2016 HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 PANTHER PTHR26402 2 230 2.2E-114 T 22-04-2016 HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 5.4E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 SMART SM00448 2 112 1.2E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 SUPERFAMILY SSF52172 1 124 2.42E-43 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 Gene3D G3DSA:1.10.10.10 135 232 2.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 SMART SM00862 153 229 1.3E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 HMPREF9228_RS08465 fdb56983f263a4c7f6ae03b4e3e7d2da 234 PANTHER PTHR26402:SF459 2 230 2.2E-114 T 22-04-2016 HMPREF9228_RS07255 ec802284e36e36aa968e3d76baad6ace 379 Gene3D G3DSA:3.60.10.10 158 376 1.1E-14 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS07255 ec802284e36e36aa968e3d76baad6ace 379 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 161 369 2.7E-21 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS07255 ec802284e36e36aa968e3d76baad6ace 379 SUPERFAMILY SSF56219 159 376 3.8E-30 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase HMPREF9228_RS03885 3faa01182d53dfefaabad16e03e99bef 466 PANTHER PTHR11785 8 465 7.6E-218 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS03885 3faa01182d53dfefaabad16e03e99bef 466 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 HMPREF9228_RS03885 3faa01182d53dfefaabad16e03e99bef 466 Pfam PF00324 Amino acid permease 21 465 1.5E-124 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS03885 3faa01182d53dfefaabad16e03e99bef 466 PANTHER PTHR11785:SF399 8 465 7.6E-218 T 22-04-2016 HMPREF9228_RS03885 3faa01182d53dfefaabad16e03e99bef 466 PIRSF PIRSF006060 1 465 5.9E-88 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS06465 948421f9571cd52f3fed994e1c8bc043 60 SUPERFAMILY SSF46689 10 57 8.15E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS06465 948421f9571cd52f3fed994e1c8bc043 60 Pfam PF01527 Transposase 9 53 6.6E-6 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 HMPREF9228_RS06465 948421f9571cd52f3fed994e1c8bc043 60 Gene3D G3DSA:1.10.10.60 15 56 1.3E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS07435 a6f0a231a656a9cffdc80120b75397a7 316 PANTHER PTHR18964:SF123 4 316 2.3E-71 T 22-04-2016 HMPREF9228_RS07435 a6f0a231a656a9cffdc80120b75397a7 316 PANTHER PTHR18964 4 316 2.3E-71 T 22-04-2016 HMPREF9228_RS07435 a6f0a231a656a9cffdc80120b75397a7 316 Pfam PF00480 ROK family 4 315 2.0E-71 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS07435 a6f0a231a656a9cffdc80120b75397a7 316 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 4 314 4.8E-83 T 22-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 HMPREF9228_RS07435 a6f0a231a656a9cffdc80120b75397a7 316 SUPERFAMILY SSF53067 1 315 4.76E-61 T 22-04-2016 HMPREF9228_RS07435 a6f0a231a656a9cffdc80120b75397a7 316 Gene3D G3DSA:3.30.420.40 2 138 4.8E-42 T 22-04-2016 HMPREF9228_RS07435 a6f0a231a656a9cffdc80120b75397a7 316 ProSitePatterns PS01125 ROK family signature. 134 161 - T 22-04-2016 IPR000600 ROK family HMPREF9228_RS07435 a6f0a231a656a9cffdc80120b75397a7 316 Gene3D G3DSA:3.30.420.40 139 299 1.6E-43 T 22-04-2016 HMPREF9228_RS01395 f0a55847601d303e966843b40c25085c 312 Pfam PF00005 ABC transporter 17 156 3.9E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS01395 f0a55847601d303e966843b40c25085c 312 PANTHER PTHR24220:SF523 3 226 3.6E-93 T 22-04-2016 HMPREF9228_RS01395 f0a55847601d303e966843b40c25085c 312 SMART SM00382 26 204 5.9E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS01395 f0a55847601d303e966843b40c25085c 312 PANTHER PTHR24220 3 226 3.6E-93 T 22-04-2016 HMPREF9228_RS01395 f0a55847601d303e966843b40c25085c 312 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS01395 f0a55847601d303e966843b40c25085c 312 Gene3D G3DSA:3.40.50.300 1 225 7.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01395 f0a55847601d303e966843b40c25085c 312 SUPERFAMILY SSF52540 2 226 7.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 PANTHER PTHR32282:SF10 1 743 0.0 T 22-04-2016 HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 ProSitePatterns PS00211 ABC transporters family signature. 330 344 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 ProSitePatterns PS00211 ABC transporters family signature. 638 652 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 SUPERFAMILY SSF52540 285 410 7.84E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 SUPERFAMILY SSF52540 12 154 7.84E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 SUPERFAMILY SSF52540 459 718 4.75E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Gene3D G3DSA:1.20.1580.10 250 320 3.5E-32 T 22-04-2016 HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Gene3D G3DSA:1.20.1580.10 510 628 3.3E-34 T 22-04-2016 HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Gene3D G3DSA:1.20.1580.10 92 149 3.5E-32 T 22-04-2016 HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Gene3D G3DSA:3.40.50.300 629 743 4.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Gene3D G3DSA:3.40.50.300 443 507 4.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Gene3D G3DSA:3.40.50.300 8 51 7.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Gene3D G3DSA:3.40.50.300 321 435 7.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 PANTHER PTHR32282 1 743 0.0 T 22-04-2016 HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Pfam PF00005 ABC transporter 461 665 2.0E-13 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04945 b13897dd0ded027f459ea07814327a50 747 Gene3D G3DSA:1.10.8.280 150 227 8.8E-7 T 22-04-2016 HMPREF9228_RS01695 6005bd95b6412ffacbe54f0bbfcac8c6 267 Pfam PF01925 Sulfite exporter TauE/SafE 8 256 1.6E-46 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 HMPREF9228_RS01695 6005bd95b6412ffacbe54f0bbfcac8c6 267 PANTHER PTHR30269:SF14 1 266 8.4E-44 T 22-04-2016 HMPREF9228_RS01695 6005bd95b6412ffacbe54f0bbfcac8c6 267 PANTHER PTHR30269 1 266 8.4E-44 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 HMPREF9228_RS05445 167472159002590a4a5605ca93604ebe 306 Pfam PF03006 Haemolysin-III related 96 294 3.6E-42 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 HMPREF9228_RS05445 167472159002590a4a5605ca93604ebe 306 PANTHER PTHR20855:SF3 104 302 1.3E-35 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 HMPREF9228_RS05445 167472159002590a4a5605ca93604ebe 306 PANTHER PTHR20855 104 302 1.3E-35 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 HMPREF9228_RS07515 5c40c9d87d00f708c74e086c3e28eaf7 407 Gene3D G3DSA:3.90.550.10 48 288 2.0E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS07515 5c40c9d87d00f708c74e086c3e28eaf7 407 SUPERFAMILY SSF53448 47 287 1.59E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS07515 5c40c9d87d00f708c74e086c3e28eaf7 407 PANTHER PTHR10859 27 401 2.2E-66 T 22-04-2016 HMPREF9228_RS07515 5c40c9d87d00f708c74e086c3e28eaf7 407 PANTHER PTHR10859:SF96 27 401 2.2E-66 T 22-04-2016 HMPREF9228_RS07515 5c40c9d87d00f708c74e086c3e28eaf7 407 Pfam PF13641 Glycosyltransferase like family 2 46 271 5.1E-23 T 22-04-2016 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 PANTHER PTHR10986:SF12 2 124 3.2E-66 T 22-04-2016 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.1E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.569 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 Gene3D G3DSA:1.10.1900.20 56 118 1.5E-29 T 22-04-2016 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 Pfam PF00453 Ribosomal protein L20 3 109 3.4E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 SUPERFAMILY SSF74731 3 117 9.29E-44 T 22-04-2016 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 PANTHER PTHR10986 2 124 3.2E-66 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 1.0E-22 T 22-04-2016 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 PRINTS PR00062 Ribosomal protein L20 signature 12 41 8.5E-35 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 PRINTS PR00062 Ribosomal protein L20 signature 75 101 8.5E-35 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 PRINTS PR00062 Ribosomal protein L20 signature 42 71 8.5E-35 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS03105 ccd7e1682b9c8e63a983df1c4d34679d 127 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 HMPREF9228_RS07875 44a6eb80a14bc604d6dc70c0f466a88c 396 SUPERFAMILY SSF103473 3 375 2.22E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS07875 44a6eb80a14bc604d6dc70c0f466a88c 396 PANTHER PTHR23501:SF16 1 378 2.5E-80 T 22-04-2016 HMPREF9228_RS07875 44a6eb80a14bc604d6dc70c0f466a88c 396 Gene3D G3DSA:1.20.1250.20 2 176 5.3E-18 T 22-04-2016 HMPREF9228_RS07875 44a6eb80a14bc604d6dc70c0f466a88c 396 Gene3D G3DSA:1.20.1250.20 192 377 9.6E-14 T 22-04-2016 HMPREF9228_RS07875 44a6eb80a14bc604d6dc70c0f466a88c 396 PANTHER PTHR23501 1 378 2.5E-80 T 22-04-2016 HMPREF9228_RS07875 44a6eb80a14bc604d6dc70c0f466a88c 396 Pfam PF07690 Major Facilitator Superfamily 9 314 6.1E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS04815 bf689d9b3082292b2b99f7749fc32ef2 448 Pfam PF07730 Histidine kinase 212 277 3.1E-15 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 HMPREF9228_RS04815 bf689d9b3082292b2b99f7749fc32ef2 448 Gene3D G3DSA:3.30.565.10 281 442 6.7E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS04815 bf689d9b3082292b2b99f7749fc32ef2 448 PANTHER PTHR24421:SF15 397 443 4.5E-17 T 22-04-2016 HMPREF9228_RS04815 bf689d9b3082292b2b99f7749fc32ef2 448 PANTHER PTHR24421:SF15 176 364 4.5E-17 T 22-04-2016 HMPREF9228_RS04815 bf689d9b3082292b2b99f7749fc32ef2 448 PANTHER PTHR24421 397 443 4.5E-17 T 22-04-2016 HMPREF9228_RS04815 bf689d9b3082292b2b99f7749fc32ef2 448 PANTHER PTHR24421 176 364 4.5E-17 T 22-04-2016 HMPREF9228_RS04815 bf689d9b3082292b2b99f7749fc32ef2 448 SUPERFAMILY SSF55874 282 437 1.9E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS00695 849d9e2a6b1f3ee9a0055ceafd74cba4 223 PANTHER PTHR10245 10 73 2.4E-17 T 22-04-2016 HMPREF9228_RS00695 849d9e2a6b1f3ee9a0055ceafd74cba4 223 Gene3D G3DSA:1.10.260.40 6 74 2.2E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00695 849d9e2a6b1f3ee9a0055ceafd74cba4 223 Pfam PF01381 Helix-turn-helix 15 69 2.7E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS00695 849d9e2a6b1f3ee9a0055ceafd74cba4 223 SMART SM00530 14 69 2.2E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS00695 849d9e2a6b1f3ee9a0055ceafd74cba4 223 SUPERFAMILY SSF47413 9 74 8.04E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS08680 1cadd3a4a57860e20fc8346da401f6aa 199 Pfam PF02632 BioY family 48 194 3.5E-31 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 HMPREF9228_RS08680 1cadd3a4a57860e20fc8346da401f6aa 199 PIRSF PIRSF016661 8 199 1.0E-30 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 HMPREF9228_RS08680 1cadd3a4a57860e20fc8346da401f6aa 199 PANTHER PTHR34295 16 191 1.7E-28 T 22-04-2016 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 Pfam PF00561 alpha/beta hydrolase fold 57 214 7.1E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 SUPERFAMILY SSF53474 340 467 1.3E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 SUPERFAMILY SSF53474 36 189 1.3E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PANTHER PTHR10992 7 106 2.7E-69 T 22-04-2016 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PANTHER PTHR10992 134 230 2.7E-69 T 22-04-2016 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PANTHER PTHR10992 377 485 2.7E-69 T 22-04-2016 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 59 67 2.8E-7 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 159 173 2.8E-7 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 91 102 2.8E-7 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 Gene3D G3DSA:3.40.50.1820 368 470 4.8E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 Gene3D G3DSA:3.40.50.1820 280 299 4.8E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 Gene3D G3DSA:3.40.50.1820 15 235 4.8E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PANTHER PTHR10992:SF749 7 106 2.7E-69 T 22-04-2016 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PANTHER PTHR10992:SF749 134 230 2.7E-69 T 22-04-2016 HMPREF9228_RS04995 927d40157d98f43e80a52584025a90c7 492 PANTHER PTHR10992:SF749 377 485 2.7E-69 T 22-04-2016 HMPREF9228_RS00190 60794a58262ddfe9b0c1957a711bede4 311 PANTHER PTHR30193 4 305 2.0E-86 T 22-04-2016 HMPREF9228_RS00190 60794a58262ddfe9b0c1957a711bede4 311 PANTHER PTHR30193:SF6 4 305 2.0E-86 T 22-04-2016 HMPREF9228_RS00190 60794a58262ddfe9b0c1957a711bede4 311 Gene3D G3DSA:1.10.3720.10 21 298 1.7E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00190 60794a58262ddfe9b0c1957a711bede4 311 SUPERFAMILY SSF161098 72 296 2.62E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00190 60794a58262ddfe9b0c1957a711bede4 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 295 2.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 PIRSF PIRSF036492 1 519 4.8E-195 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 PANTHER PTHR11699 4 283 3.7E-181 T 22-04-2016 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 PANTHER PTHR11699 344 518 3.7E-181 T 22-04-2016 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 207 214 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 SUPERFAMILY SSF53720 3 303 2.39E-99 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 SUPERFAMILY SSF53720 372 490 2.39E-99 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 Gene3D G3DSA:3.40.605.10 3 221 1.0E-57 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 PANTHER PTHR11699:SF15 4 283 3.7E-181 T 22-04-2016 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 PANTHER PTHR11699:SF15 344 518 3.7E-181 T 22-04-2016 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 Gene3D G3DSA:3.40.309.10 222 296 4.0E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 Gene3D G3DSA:3.40.309.10 353 464 4.0E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 235 246 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 Pfam PF00171 Aldehyde dehydrogenase family 19 295 5.4E-57 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS06320 04696d4d9d92a014501c9e59b712b671 519 Pfam PF00171 Aldehyde dehydrogenase family 360 487 8.9E-24 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS07275 ef43c3cbcd8e4a8b8f19ce0cc4382a10 157 PIRSF PIRSF018267 7 147 1.4E-61 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 HMPREF9228_RS07275 ef43c3cbcd8e4a8b8f19ce0cc4382a10 157 SUPERFAMILY SSF52980 9 143 7.51E-49 T 22-04-2016 IPR011335 Restriction endonuclease type II-like HMPREF9228_RS07275 ef43c3cbcd8e4a8b8f19ce0cc4382a10 157 Gene3D G3DSA:3.40.960.10 27 135 2.3E-48 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 HMPREF9228_RS07275 ef43c3cbcd8e4a8b8f19ce0cc4382a10 157 Pfam PF03852 DNA mismatch endonuclease Vsr 9 78 2.9E-29 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 HMPREF9228_RS07275 ef43c3cbcd8e4a8b8f19ce0cc4382a10 157 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 10 125 1.8E-38 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 HMPREF9228_RS01890 16a45cf87d9c47f14c5465a3f2b9d7be 204 SUPERFAMILY SSF50346 108 200 1.57E-9 T 22-04-2016 IPR011033 PRC-barrel-like HMPREF9228_RS01890 16a45cf87d9c47f14c5465a3f2b9d7be 204 SUPERFAMILY SSF50447 14 98 1.48E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS01890 16a45cf87d9c47f14c5465a3f2b9d7be 204 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 199 2.3E-36 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 HMPREF9228_RS01890 16a45cf87d9c47f14c5465a3f2b9d7be 204 Gene3D G3DSA:2.40.30.60 12 98 7.6E-22 T 22-04-2016 IPR002676 RimM protein GO:0006364 HMPREF9228_RS01890 16a45cf87d9c47f14c5465a3f2b9d7be 204 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 200 23.643 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 HMPREF9228_RS01890 16a45cf87d9c47f14c5465a3f2b9d7be 204 PANTHER PTHR33692 1 201 1.1E-33 T 22-04-2016 HMPREF9228_RS01890 16a45cf87d9c47f14c5465a3f2b9d7be 204 Gene3D G3DSA:2.30.30.240 108 200 1.2E-11 T 22-04-2016 HMPREF9228_RS01890 16a45cf87d9c47f14c5465a3f2b9d7be 204 Pfam PF01782 RimM N-terminal domain 18 97 6.5E-25 T 22-04-2016 IPR002676 RimM protein GO:0006364 HMPREF9228_RS08885 07863cca397d85be231f6364555aa967 229 Gene3D G3DSA:1.10.3720.10 12 223 1.9E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08885 07863cca397d85be231f6364555aa967 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 216 1.5E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08885 07863cca397d85be231f6364555aa967 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 116 1.5E-14 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 HMPREF9228_RS08885 07863cca397d85be231f6364555aa967 229 PANTHER PTHR30614 7 229 1.1E-45 T 22-04-2016 HMPREF9228_RS08885 07863cca397d85be231f6364555aa967 229 SUPERFAMILY SSF161098 13 213 6.54E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08770 ec09db56c6d4af8636ac6b90bb7880bc 314 Pfam PF03547 Membrane transport protein 16 146 7.2E-9 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 HMPREF9228_RS08770 ec09db56c6d4af8636ac6b90bb7880bc 314 Pfam PF03547 Membrane transport protein 163 305 2.2E-17 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 HMPREF9228_RS08770 ec09db56c6d4af8636ac6b90bb7880bc 314 PANTHER PTHR36838 3 312 5.7E-21 T 22-04-2016 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 PANTHER PTHR21600:SF2 14 254 1.2E-77 T 22-04-2016 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 PANTHER PTHR21600 14 254 1.2E-77 T 22-04-2016 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 84 243 2.8E-43 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 SUPERFAMILY SSF55120 80 247 9.25E-36 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 117 131 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 Gene3D G3DSA:3.10.290.10 17 78 9.4E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 SMART SM00363 18 77 7.7E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 Pfam PF00849 RNA pseudouridylate synthase 81 211 1.1E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 Pfam PF01479 S4 domain 19 61 1.5E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 HMPREF9228_RS04015 57949578aeed277ecfe57cfc73db7789 256 SUPERFAMILY SSF55174 16 76 2.75E-13 T 22-04-2016 HMPREF9228_RS05160 4dd2feb1086c07b84b3cc9028c337570 228 PANTHER PTHR30450 1 226 4.8E-77 T 22-04-2016 HMPREF9228_RS05160 4dd2feb1086c07b84b3cc9028c337570 228 Gene3D G3DSA:1.10.3720.10 16 224 3.9E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS05160 4dd2feb1086c07b84b3cc9028c337570 228 PANTHER PTHR30450:SF3 1 226 4.8E-77 T 22-04-2016 HMPREF9228_RS05160 4dd2feb1086c07b84b3cc9028c337570 228 SUPERFAMILY SSF161098 16 211 2.88E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS05160 4dd2feb1086c07b84b3cc9028c337570 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 224 1.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04550 6f1076a4809a4e46921d037bf86503d3 112 Gene3D G3DSA:3.30.428.10 2 110 1.8E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 HMPREF9228_RS04550 6f1076a4809a4e46921d037bf86503d3 112 Pfam PF01230 HIT domain 15 109 4.3E-25 T 22-04-2016 IPR001310 Histidine triad (HIT) protein HMPREF9228_RS04550 6f1076a4809a4e46921d037bf86503d3 112 PANTHER PTHR23089 3 111 2.2E-37 T 22-04-2016 IPR001310 Histidine triad (HIT) protein HMPREF9228_RS04550 6f1076a4809a4e46921d037bf86503d3 112 SUPERFAMILY SSF54197 1 109 3.25E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 HMPREF9228_RS04550 6f1076a4809a4e46921d037bf86503d3 112 PANTHER PTHR23089:SF2 3 111 2.2E-37 T 22-04-2016 HMPREF9228_RS04550 6f1076a4809a4e46921d037bf86503d3 112 PRINTS PR00332 Histidine triad family signature 29 47 5.0E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein HMPREF9228_RS04550 6f1076a4809a4e46921d037bf86503d3 112 PRINTS PR00332 Histidine triad family signature 95 105 5.0E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein HMPREF9228_RS04550 6f1076a4809a4e46921d037bf86503d3 112 PRINTS PR00332 Histidine triad family signature 8 24 5.0E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 PRINTS PR00990 Ribokinase signature 127 140 7.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 PRINTS PR00990 Ribokinase signature 56 75 7.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 PRINTS PR00990 Ribokinase signature 245 256 7.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 PRINTS PR00990 Ribokinase signature 196 211 7.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 PRINTS PR00990 Ribokinase signature 29 50 7.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 PANTHER PTHR10584 13 329 3.8E-74 T 22-04-2016 HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 SUPERFAMILY SSF53613 26 329 6.55E-75 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 Pfam PF00294 pfkB family carbohydrate kinase 26 319 2.1E-57 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 PANTHER PTHR10584:SF166 13 329 3.8E-74 T 22-04-2016 HMPREF9228_RS07025 db35571cbdefbf9995600b7789f2cab3 333 Gene3D G3DSA:3.40.1190.20 25 330 2.2E-85 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS06025 ad84447b80dabf6e637ca0eef9abe61c 87 SUPERFAMILY SSF51161 9 79 6.24E-27 T 22-04-2016 IPR011004 Trimeric LpxA-like HMPREF9228_RS06025 ad84447b80dabf6e637ca0eef9abe61c 87 Gene3D G3DSA:2.160.10.10 5 74 1.8E-25 T 22-04-2016 HMPREF9228_RS06025 ad84447b80dabf6e637ca0eef9abe61c 87 PANTHER PTHR23416:SF58 3 75 4.0E-23 T 22-04-2016 HMPREF9228_RS06025 ad84447b80dabf6e637ca0eef9abe61c 87 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 47 6.7E-12 T 22-04-2016 IPR001451 Hexapeptide repeat HMPREF9228_RS06025 ad84447b80dabf6e637ca0eef9abe61c 87 PANTHER PTHR23416 3 75 4.0E-23 T 22-04-2016 HMPREF9228_RS08105 3fb4a216730c5654cd7539359acd21eb 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 18.874 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08105 3fb4a216730c5654cd7539359acd21eb 61 SUPERFAMILY SSF55129 3 61 2.62E-19 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain HMPREF9228_RS08105 3fb4a216730c5654cd7539359acd21eb 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 4.4E-19 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS08105 3fb4a216730c5654cd7539359acd21eb 61 Gene3D G3DSA:3.30.1390.20 3 60 8.0E-25 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain HMPREF9228_RS08105 3fb4a216730c5654cd7539359acd21eb 61 PANTHER PTHR15892 1 61 3.8E-18 T 22-04-2016 HMPREF9228_RS08105 3fb4a216730c5654cd7539359acd21eb 61 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 9.1E-17 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain HMPREF9228_RS08105 3fb4a216730c5654cd7539359acd21eb 61 PIRSF PIRSF002211 1 61 2.4E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS03175 f520ebe96abcf6567e3d000a725d02eb 1040 Pfam PF02687 FtsX-like permease family 355 476 4.7E-9 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS03175 f520ebe96abcf6567e3d000a725d02eb 1040 Pfam PF02687 FtsX-like permease family 918 1026 1.9E-7 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS03175 f520ebe96abcf6567e3d000a725d02eb 1040 PANTHER PTHR30489 112 483 2.7E-13 T 22-04-2016 HMPREF9228_RS03175 f520ebe96abcf6567e3d000a725d02eb 1040 PANTHER PTHR30489 35 95 2.7E-13 T 22-04-2016 HMPREF9228_RS00670 c98601d285c0cd1ab8ac0ff3f93ca46f 376 SUPERFAMILY SSF111331 15 148 8.01E-49 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain HMPREF9228_RS00670 c98601d285c0cd1ab8ac0ff3f93ca46f 376 SUPERFAMILY SSF111331 172 347 8.01E-49 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain HMPREF9228_RS00670 c98601d285c0cd1ab8ac0ff3f93ca46f 376 Pfam PF00781 Diacylglycerol kinase catalytic domain 15 141 2.2E-18 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 HMPREF9228_RS00670 c98601d285c0cd1ab8ac0ff3f93ca46f 376 PANTHER PTHR12358 168 356 5.2E-30 T 22-04-2016 HMPREF9228_RS00670 c98601d285c0cd1ab8ac0ff3f93ca46f 376 PANTHER PTHR12358 18 148 5.2E-30 T 22-04-2016 HMPREF9228_RS00670 c98601d285c0cd1ab8ac0ff3f93ca46f 376 Gene3D G3DSA:3.40.50.10330 61 104 8.7E-4 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 HMPREF9228_RS00670 c98601d285c0cd1ab8ac0ff3f93ca46f 376 SMART SM00046 10 140 0.01 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 HMPREF9228_RS09330 899b82988d2b5dd5cd6007a1c4c59348 490 PANTHER PTHR11785 22 483 1.4E-167 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS09330 899b82988d2b5dd5cd6007a1c4c59348 490 Pfam PF00324 Amino acid permease 30 485 5.1E-106 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS09330 899b82988d2b5dd5cd6007a1c4c59348 490 PANTHER PTHR11785:SF26 22 483 1.4E-167 T 22-04-2016 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 Pfam PF08442 ATP-grasp domain 2 194 8.4E-55 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 SUPERFAMILY SSF52210 237 390 2.09E-39 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 PIRSF PIRSF001554 1 393 1.2E-129 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 PANTHER PTHR11815 1 394 3.8E-132 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 Gene3D G3DSA:3.30.470.20 87 232 1.2E-44 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 Pfam PF00549 CoA-ligase 262 369 6.2E-11 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 Gene3D G3DSA:3.40.50.261 239 390 1.4E-47 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 255 279 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 SUPERFAMILY SSF56059 1 233 1.2E-57 T 22-04-2016 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 PANTHER PTHR11815:SF1 1 394 3.8E-132 T 22-04-2016 HMPREF9228_RS04040 a0c7eba329c47e01447c4251cf986af9 400 Gene3D G3DSA:3.30.1490.20 24 86 6.6E-12 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 HMPREF9228_RS02885 2e7725c58b62d8e444e52d259f60ddc7 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 303 5.2E-63 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 HMPREF9228_RS02885 2e7725c58b62d8e444e52d259f60ddc7 314 Gene3D G3DSA:1.20.1510.10 21 218 2.9E-45 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain HMPREF9228_RS02885 2e7725c58b62d8e444e52d259f60ddc7 314 Pfam PF01545 Cation efflux family 24 218 2.5E-36 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 HMPREF9228_RS02885 2e7725c58b62d8e444e52d259f60ddc7 314 SUPERFAMILY SSF160240 223 302 4.84E-13 T 22-04-2016 HMPREF9228_RS02885 2e7725c58b62d8e444e52d259f60ddc7 314 PANTHER PTHR11562:SF17 21 311 3.7E-81 T 22-04-2016 HMPREF9228_RS02885 2e7725c58b62d8e444e52d259f60ddc7 314 SUPERFAMILY SSF161111 20 219 8.63E-43 T 22-04-2016 HMPREF9228_RS02885 2e7725c58b62d8e444e52d259f60ddc7 314 PANTHER PTHR11562 21 311 3.7E-81 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 HMPREF9228_RS02885 2e7725c58b62d8e444e52d259f60ddc7 314 Gene3D G3DSA:3.30.70.1350 227 303 7.4E-9 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 16 241 3.0E-18 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 PANTHER PTHR10000:SF27 13 274 1.1E-49 T 22-04-2016 HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 Gene3D G3DSA:3.30.1240.10 95 187 2.1E-17 T 22-04-2016 HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 Pfam PF08282 haloacid dehalogenase-like hydrolase 16 268 7.5E-52 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 15 268 2.7E-43 T 22-04-2016 IPR000150 Cof protein GO:0016787 HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 Gene3D G3DSA:3.40.50.1000 8 83 3.0E-46 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 Gene3D G3DSA:3.40.50.1000 188 274 3.0E-46 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 SUPERFAMILY SSF56784 12 272 2.66E-60 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04000 7527c840dd14695d11350fe2763aebb2 278 PANTHER PTHR10000 13 274 1.1E-49 T 22-04-2016 HMPREF9228_RS08350 facdbf9d73bf21873a34beb53098487d 508 PANTHER PTHR11785 247 486 1.1E-135 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS08350 facdbf9d73bf21873a34beb53098487d 508 PANTHER PTHR11785 15 213 1.1E-135 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS08350 facdbf9d73bf21873a34beb53098487d 508 Pfam PF13520 Amino acid permease 27 462 3.0E-54 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS08350 facdbf9d73bf21873a34beb53098487d 508 PIRSF PIRSF006060 4 502 4.5E-83 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS08350 facdbf9d73bf21873a34beb53098487d 508 PANTHER PTHR11785:SF342 247 486 1.1E-135 T 22-04-2016 HMPREF9228_RS08350 facdbf9d73bf21873a34beb53098487d 508 PANTHER PTHR11785:SF342 15 213 1.1E-135 T 22-04-2016 HMPREF9228_RS04785 8b8609a5e8abc7a007c0219bfc2c524c 195 Pfam PF13470 PIN domain 4 111 7.9E-15 T 22-04-2016 IPR002716 PIN domain HMPREF9228_RS04785 8b8609a5e8abc7a007c0219bfc2c524c 195 SUPERFAMILY SSF88723 1 114 3.77E-6 T 22-04-2016 IPR029060 PIN domain-like HMPREF9228_RS04740 4effb0bb267dd103c469191da4e647d5 86 Pfam PF11188 Protein of unknown function (DUF2975) 38 77 7.9E-7 T 22-04-2016 IPR021354 Protein of unknown function DUF2975 HMPREF9228_RS07825 d5c75ab0a36dd2b0d18f9d9474abc626 245 Gene3D G3DSA:3.90.1720.10 109 230 7.4E-15 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS07825 d5c75ab0a36dd2b0d18f9d9474abc626 245 SUPERFAMILY SSF54001 132 244 1.15E-15 T 22-04-2016 HMPREF9228_RS07825 d5c75ab0a36dd2b0d18f9d9474abc626 245 Pfam PF00877 NlpC/P60 family 145 224 2.8E-11 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 Pfam PF01668 SmpB protein 10 73 7.6E-29 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 69.788 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 1.8E-55 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 PANTHER PTHR30308:SF2 1 157 2.2E-72 T 22-04-2016 HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 PANTHER PTHR30308 1 157 2.2E-72 T 22-04-2016 HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 134 3.0E-67 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 Gene3D G3DSA:2.40.280.10 8 129 3.8E-50 T 22-04-2016 IPR023620 Small protein B HMPREF9228_RS06670 c93cfab9cf0b6a10f7f6dbf45b53ab02 158 SUPERFAMILY SSF74982 4 134 6.93E-49 T 22-04-2016 IPR023620 Small protein B HMPREF9228_RS06800 2961ea9c206233d5a42f04fe9221d9c5 90 PANTHER PTHR34875 1 90 8.3E-25 T 22-04-2016 HMPREF9228_RS06800 2961ea9c206233d5a42f04fe9221d9c5 90 Hamap MF_01054 UPF0237 protein . 2 90 27.072 T 22-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type HMPREF9228_RS06800 2961ea9c206233d5a42f04fe9221d9c5 90 Gene3D G3DSA:3.30.70.260 1 90 2.3E-30 T 22-04-2016 HMPREF9228_RS06800 2961ea9c206233d5a42f04fe9221d9c5 90 SUPERFAMILY SSF55021 3 84 4.15E-21 T 22-04-2016 HMPREF9228_RS06800 2961ea9c206233d5a42f04fe9221d9c5 90 Pfam PF13740 ACT domain 5 79 3.1E-14 T 22-04-2016 HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 Gene3D G3DSA:2.40.30.10 161 211 1.1E-8 T 22-04-2016 HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 Gene3D G3DSA:2.40.30.10 6 45 1.1E-8 T 22-04-2016 HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 Gene3D G3DSA:4.10.960.10 79 160 6.0E-34 T 22-04-2016 HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 4 210 38.226 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 SUPERFAMILY SSF50447 4 211 7.42E-79 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 PANTHER PTHR11229 1 211 3.0E-101 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 Pfam PF00297 Ribosomal protein L3 91 180 2.0E-18 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08195 9b492f9745500adfa656a0cd340970e5 213 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 7 207 1.9E-86 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 PANTHER PTHR10799 836 1051 7.8E-162 T 22-04-2016 HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 PANTHER PTHR10799 1075 1319 7.8E-162 T 22-04-2016 HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 PANTHER PTHR10799 733 755 7.8E-162 T 22-04-2016 HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 Pfam PF08455 Bacterial SNF2 helicase associated 482 842 1.4E-69 T 22-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 Gene3D G3DSA:3.40.50.300 1168 1311 6.3E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 Pfam PF00271 Helicase conserved C-terminal domain 1172 1283 2.7E-19 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 SMART SM00487 845 1044 4.1E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 Pfam PF04434 SWIM zinc finger 178 217 5.2E-5 T 22-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 Pfam PF00176 SNF2 family N-terminal domain 867 1161 6.7E-57 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 SUPERFAMILY SSF52540 833 1068 2.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 SUPERFAMILY SSF52540 1092 1319 1.45E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 Gene3D G3DSA:3.40.50.300 840 1030 9.2E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07285 7cdab8d48d0cd548c8618a7f71a29497 1354 SMART SM00490 1201 1283 3.6E-21 T 22-04-2016 IPR001650 Helicase, C-terminal HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 PANTHER PTHR30349:SF5 11 309 1.2E-102 T 22-04-2016 HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 308 3.0E-110 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 6 308 58.993 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 308 31.677 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 PANTHER PTHR30349 11 309 1.2E-102 T 22-04-2016 HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 Pfam PF00589 Phage integrase family 115 293 1.5E-51 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 93 2.4E-19 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 SUPERFAMILY SSF56349 6 300 7.06E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 Gene3D G3DSA:1.10.443.10 115 301 3.4E-58 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS03125 5b0f826ce18301d78b6fd7e38c0b800d 309 Gene3D G3DSA:1.10.150.130 9 102 1.2E-25 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal HMPREF9228_RS03340 6e29c94ec26d00e92de21c5ab1d40f58 170 Pfam PF13560 Helix-turn-helix domain 98 157 2.7E-11 T 22-04-2016 HMPREF9228_RS03340 6e29c94ec26d00e92de21c5ab1d40f58 170 SMART SM00530 102 157 2.5E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS03340 6e29c94ec26d00e92de21c5ab1d40f58 170 SUPERFAMILY SSF47413 98 159 4.22E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS03340 6e29c94ec26d00e92de21c5ab1d40f58 170 Gene3D G3DSA:1.10.260.40 99 159 4.5E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS03515 cb09d67334c1e0816df920436335fa30 425 Gene3D G3DSA:3.20.20.80 270 323 1.3E-5 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS03515 cb09d67334c1e0816df920436335fa30 425 Gene3D G3DSA:3.20.20.80 18 269 8.5E-15 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS03515 cb09d67334c1e0816df920436335fa30 425 SUPERFAMILY SSF51445 2 293 4.73E-31 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00320 2725ec2181438159753f8403e084a67a 488 SUPERFAMILY SSF56601 140 487 2.05E-82 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS00320 2725ec2181438159753f8403e084a67a 488 Gene3D G3DSA:3.40.710.10 146 487 4.3E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS00320 2725ec2181438159753f8403e084a67a 488 PANTHER PTHR30627:SF3 59 487 2.9E-106 T 22-04-2016 HMPREF9228_RS00320 2725ec2181438159753f8403e084a67a 488 Pfam PF00905 Penicillin binding protein transpeptidase domain 157 482 1.3E-66 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 HMPREF9228_RS00320 2725ec2181438159753f8403e084a67a 488 PANTHER PTHR30627 59 487 2.9E-106 T 22-04-2016 HMPREF9228_RS00320 2725ec2181438159753f8403e084a67a 488 Gene3D G3DSA:3.90.1310.10 74 145 1.8E-8 T 22-04-2016 HMPREF9228_RS08900 a3d1e86a9678738dc01184b63e8e0f04 249 SMART SM00382 29 220 6.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS08900 a3d1e86a9678738dc01184b63e8e0f04 249 PANTHER PTHR24220:SF327 6 246 1.1E-119 T 22-04-2016 HMPREF9228_RS08900 a3d1e86a9678738dc01184b63e8e0f04 249 Pfam PF00005 ABC transporter 20 172 8.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS08900 a3d1e86a9678738dc01184b63e8e0f04 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS08900 a3d1e86a9678738dc01184b63e8e0f04 249 SUPERFAMILY SSF52540 5 242 9.83E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08900 a3d1e86a9678738dc01184b63e8e0f04 249 PIRSF PIRSF039085 1 248 1.7E-99 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 HMPREF9228_RS08900 a3d1e86a9678738dc01184b63e8e0f04 249 Gene3D G3DSA:3.40.50.300 4 244 1.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08900 a3d1e86a9678738dc01184b63e8e0f04 249 PANTHER PTHR24220 6 246 1.1E-119 T 22-04-2016 HMPREF9228_RS06675 eb94486cef6cb28d970606d2aa95d3b5 448 PANTHER PTHR33308:SF2 339 448 3.8E-15 T 22-04-2016 HMPREF9228_RS06675 eb94486cef6cb28d970606d2aa95d3b5 448 SUPERFAMILY SSF54001 338 446 2.26E-20 T 22-04-2016 HMPREF9228_RS06675 eb94486cef6cb28d970606d2aa95d3b5 448 PANTHER PTHR33308 339 448 3.8E-15 T 22-04-2016 HMPREF9228_RS06675 eb94486cef6cb28d970606d2aa95d3b5 448 Pfam PF05257 CHAP domain 339 426 2.0E-14 T 22-04-2016 IPR007921 CHAP domain HMPREF9228_RS08270 6e258b29bb20c15a7ae1009c97359fda 709 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 142 699 4.3E-90 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 HMPREF9228_RS08270 6e258b29bb20c15a7ae1009c97359fda 709 SUPERFAMILY SSF51445 183 604 8.42E-125 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS08270 6e258b29bb20c15a7ae1009c97359fda 709 SUPERFAMILY SSF51445 638 695 8.42E-125 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS08270 6e258b29bb20c15a7ae1009c97359fda 709 Gene3D G3DSA:3.20.20.80 642 697 1.1E-143 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS08270 6e258b29bb20c15a7ae1009c97359fda 709 Gene3D G3DSA:3.20.20.80 183 607 1.1E-143 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS08270 6e258b29bb20c15a7ae1009c97359fda 709 Pfam PF02446 4-alpha-glucanotransferase 189 693 4.5E-108 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 HMPREF9228_RS08270 6e258b29bb20c15a7ae1009c97359fda 709 PANTHER PTHR32438:SF5 12 696 5.3E-118 T 22-04-2016 HMPREF9228_RS08270 6e258b29bb20c15a7ae1009c97359fda 709 PANTHER PTHR32438 12 696 5.3E-118 T 22-04-2016 HMPREF9228_RS04215 3822a48ddc2a56cdc1610397759b5e08 396 Gene3D G3DSA:3.90.1150.10 293 392 8.6E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS04215 3822a48ddc2a56cdc1610397759b5e08 396 SUPERFAMILY SSF53383 14 391 1.14E-83 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS04215 3822a48ddc2a56cdc1610397759b5e08 396 PANTHER PTHR11751:SF429 13 390 2.7E-84 T 22-04-2016 HMPREF9228_RS04215 3822a48ddc2a56cdc1610397759b5e08 396 Pfam PF00155 Aminotransferase class I and II 38 381 7.3E-43 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS04215 3822a48ddc2a56cdc1610397759b5e08 396 Gene3D G3DSA:3.40.640.10 47 292 1.6E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS04215 3822a48ddc2a56cdc1610397759b5e08 396 PANTHER PTHR11751 13 390 2.7E-84 T 22-04-2016 HMPREF9228_RS08360 77a8ab50e42efb25f2c2dda99e3bf23c 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 6 55 3.0E-24 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08360 77a8ab50e42efb25f2c2dda99e3bf23c 55 SUPERFAMILY SSF57829 4 55 3.54E-21 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 HMPREF9228_RS08360 77a8ab50e42efb25f2c2dda99e3bf23c 55 PANTHER PTHR15238:SF3 1 54 5.1E-26 T 22-04-2016 HMPREF9228_RS08360 77a8ab50e42efb25f2c2dda99e3bf23c 55 Pfam PF00471 Ribosomal protein L33 11 55 4.2E-26 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08360 77a8ab50e42efb25f2c2dda99e3bf23c 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 7 55 20.282 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08360 77a8ab50e42efb25f2c2dda99e3bf23c 55 PANTHER PTHR15238 1 54 5.1E-26 T 22-04-2016 HMPREF9228_RS08360 77a8ab50e42efb25f2c2dda99e3bf23c 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 23 42 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS07000 38ce7a461f3ad0a7c1361a8163d12b6e 652 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 9 632 5.3E-96 T 22-04-2016 IPR010144 CRISPR-associated protein, Csd1-type HMPREF9228_RS07085 aabee69cab73e4bdd80e3d9630963e58 318 SUPERFAMILY SSF53613 1 313 9.04E-70 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS07085 aabee69cab73e4bdd80e3d9630963e58 318 PANTHER PTHR10584 1 314 1.0E-53 T 22-04-2016 HMPREF9228_RS07085 aabee69cab73e4bdd80e3d9630963e58 318 PRINTS PR00990 Ribokinase signature 229 240 1.7E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07085 aabee69cab73e4bdd80e3d9630963e58 318 PRINTS PR00990 Ribokinase signature 34 53 1.7E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07085 aabee69cab73e4bdd80e3d9630963e58 318 PRINTS PR00990 Ribokinase signature 6 27 1.7E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 HMPREF9228_RS07085 aabee69cab73e4bdd80e3d9630963e58 318 Pfam PF00294 pfkB family carbohydrate kinase 1 303 1.2E-51 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB HMPREF9228_RS07085 aabee69cab73e4bdd80e3d9630963e58 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 HMPREF9228_RS07085 aabee69cab73e4bdd80e3d9630963e58 318 Gene3D G3DSA:3.40.1190.20 1 314 8.4E-71 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS02145 888080860e872529802e110231979b60 572 Pfam PF02397 Bacterial sugar transferase 378 566 9.1E-57 T 22-04-2016 IPR003362 Bacterial sugar transferase HMPREF9228_RS02145 888080860e872529802e110231979b60 572 PANTHER PTHR30576 290 572 8.8E-109 T 22-04-2016 HMPREF9228_RS02145 888080860e872529802e110231979b60 572 PANTHER PTHR30576 69 270 8.8E-109 T 22-04-2016 HMPREF9228_RS02145 888080860e872529802e110231979b60 572 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 98 572 2.7E-111 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 Gene3D G3DSA:3.80.30.20 4 244 3.7E-35 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 PANTHER PTHR13932:SF5 326 432 3.2E-120 T 22-04-2016 HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 SUPERFAMILY SSF102114 4 277 4.84E-99 T 22-04-2016 HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 SUPERFAMILY SSF102114 323 432 4.84E-99 T 22-04-2016 HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 SMART SM00729 1 230 1.2E-49 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 PANTHER PTHR13932 326 432 3.2E-120 T 22-04-2016 HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 PANTHER PTHR13932 4 280 3.2E-120 T 22-04-2016 HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 PANTHER PTHR13932:SF5 4 280 3.2E-120 T 22-04-2016 HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 Pfam PF04055 Radical SAM superfamily 6 179 2.8E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 Pfam PF06969 HemN C-terminal domain 354 422 1.2E-12 T 22-04-2016 IPR010723 HemN, C-terminal HMPREF9228_RS04475 47ff1bc4fff06ed02461376a02870357 437 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 280 3.4E-73 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 PANTHER PTHR18964:SF123 78 406 7.6E-45 T 22-04-2016 HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 SUPERFAMILY SSF53067 102 402 8.98E-42 T 22-04-2016 HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 Gene3D G3DSA:3.30.420.40 242 383 7.5E-34 T 22-04-2016 HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 Gene3D G3DSA:1.10.10.10 42 93 8.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 Pfam PF09339 IclR helix-turn-helix domain 50 77 7.7E-5 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 Pfam PF00480 ROK family 103 398 3.9E-42 T 22-04-2016 IPR000600 ROK family HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 PANTHER PTHR18964 78 406 7.6E-45 T 22-04-2016 HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 SUPERFAMILY SSF46785 28 91 4.82E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09040 4841f1cf016ac8ceddd00b481399a2df 432 Gene3D G3DSA:3.30.420.40 102 241 4.6E-22 T 22-04-2016 HMPREF9228_RS09060 8b7b839a50e8d9b36f5106a18e9db52a 750 SUPERFAMILY SSF53649 368 670 1.92E-7 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 HMPREF9228_RS09060 8b7b839a50e8d9b36f5106a18e9db52a 750 Pfam PF00884 Sulfatase 367 666 4.9E-32 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 HMPREF9228_RS06360 6d2cef81d4042799f7e372edfbb3e377 40 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 2.3E-6 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06360 6d2cef81d4042799f7e372edfbb3e377 40 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 40 13.841 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06360 6d2cef81d4042799f7e372edfbb3e377 40 Pfam PF00444 Ribosomal protein L36 1 40 1.6E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06360 6d2cef81d4042799f7e372edfbb3e377 40 SUPERFAMILY SSF57840 1 40 1.27E-11 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01640 60814e26d7aa04e22fe30a93db59a40b 305 PANTHER PTHR10434 78 276 5.2E-32 T 22-04-2016 HMPREF9228_RS01640 60814e26d7aa04e22fe30a93db59a40b 305 Gene3D G3DSA:3.40.1130.10 79 206 8.4E-8 T 22-04-2016 HMPREF9228_RS01640 60814e26d7aa04e22fe30a93db59a40b 305 SMART SM00563 88 212 9.6E-22 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 HMPREF9228_RS01640 60814e26d7aa04e22fe30a93db59a40b 305 Pfam PF01553 Acyltransferase 78 208 8.7E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 HMPREF9228_RS01640 60814e26d7aa04e22fe30a93db59a40b 305 SUPERFAMILY SSF69593 61 282 2.75E-25 T 22-04-2016 HMPREF9228_RS01640 60814e26d7aa04e22fe30a93db59a40b 305 PANTHER PTHR10434:SF21 78 276 5.2E-32 T 22-04-2016 HMPREF9228_RS03820 2a7c5799768decdb8e2871a382a35d44 339 Pfam PF12704 MacB-like periplasmic core domain 17 229 2.3E-6 T 22-04-2016 IPR025857 MacB-like periplasmic core domain HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 SUPERFAMILY SSF52540 3 189 6.37E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 SUPERFAMILY SSF52540 339 492 1.15E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 Gene3D G3DSA:3.40.50.300 3 207 9.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 Gene3D G3DSA:3.40.50.300 343 494 4.2E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 ProSitePatterns PS00211 ABC transporters family signature. 116 130 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 Pfam PF00005 ABC transporter 339 460 3.3E-11 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 Pfam PF00005 ABC transporter 32 144 5.5E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 PANTHER PTHR19211 1 309 6.2E-45 T 22-04-2016 HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 PANTHER PTHR19211 329 501 6.2E-45 T 22-04-2016 HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 SMART SM00382 343 495 8.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07585 ee5a1791e4248b1a1281e4a03bb7bfe6 503 SMART SM00382 30 188 1.0E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03595 9de5182e5d8c6e7a35981041ff69123a 568 PANTHER PTHR30619:SF2 272 539 4.5E-33 T 22-04-2016 HMPREF9228_RS03595 9de5182e5d8c6e7a35981041ff69123a 568 PANTHER PTHR30619 272 539 4.5E-33 T 22-04-2016 HMPREF9228_RS03595 9de5182e5d8c6e7a35981041ff69123a 568 Pfam PF03772 Competence protein 273 522 5.5E-40 T 22-04-2016 IPR004477 ComEC/Rec2-related protein HMPREF9228_RS03595 9de5182e5d8c6e7a35981041ff69123a 568 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 281 454 1.5E-21 T 22-04-2016 IPR004477 ComEC/Rec2-related protein HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 PANTHER PTHR10357 19 292 1.5E-57 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 PANTHER PTHR10357 349 437 1.5E-57 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 Pfam PF09244 Domain of unknown function (DUF1964) 435 503 1.8E-31 T 22-04-2016 IPR015325 Sucrose phosphorylase, C-terminal HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 Pfam PF00128 Alpha amylase, catalytic domain 35 212 2.7E-10 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 PIRSF PIRSF003059 1 495 6.2E-170 T 22-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 PANTHER PTHR10357:SF132 19 292 1.5E-57 T 22-04-2016 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 PANTHER PTHR10357:SF132 349 437 1.5E-57 T 22-04-2016 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 3 466 1.0E-129 T 22-04-2016 IPR022527 Sucrose phosphorylase, GftA GO:0005985|GO:0009018 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 Gene3D G3DSA:3.90.400.10 89 165 1.6E-28 T 22-04-2016 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 SUPERFAMILY SSF51011 435 506 1.87E-26 T 22-04-2016 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 SUPERFAMILY SSF51445 1 433 1.69E-86 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 Gene3D G3DSA:3.20.20.80 172 432 2.0E-98 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 Gene3D G3DSA:3.20.20.80 1 88 2.0E-98 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00490 1259168d8ab46b87d0a12d5b562bfc74 508 SMART SM00642 6 430 1.2E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 SUPERFAMILY SSF53254 1 220 8.64E-72 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 PANTHER PTHR11931 2 246 1.7E-141 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 Gene3D G3DSA:3.40.50.1240 1 245 4.6E-89 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 245 1.1E-108 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 SMART SM00855 4 187 2.2E-24 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 228 42.288 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 134 207 1.7E-5 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS07855 5087e5dbdbd467c72bf271382e50445b 246 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 124 1.2E-29 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS09150 4871f351836b51465dc77c72816cceb0 286 SUPERFAMILY SSF56235 2 279 1.35E-16 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS09150 4871f351836b51465dc77c72816cceb0 286 PANTHER PTHR11907:SF10 1 206 5.4E-12 T 22-04-2016 HMPREF9228_RS09150 4871f351836b51465dc77c72816cceb0 286 Gene3D G3DSA:3.60.20.10 1 278 3.7E-28 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal HMPREF9228_RS09150 4871f351836b51465dc77c72816cceb0 286 PANTHER PTHR11907 1 206 5.4E-12 T 22-04-2016 HMPREF9228_RS09150 4871f351836b51465dc77c72816cceb0 286 Pfam PF13522 Glutamine amidotransferase domain 88 203 3.0E-13 T 22-04-2016 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.8E-22 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.8E-22 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.8E-22 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 PIRSF PIRSF002144 1 92 3.3E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 Gene3D G3DSA:3.30.860.10 1 92 2.9E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 SUPERFAMILY SSF54570 3 83 1.57E-33 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 1.3E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 PANTHER PTHR11880 1 92 1.0E-50 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 Pfam PF00203 Ribosomal protein S19 3 83 1.1E-35 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08175 bb1dddc73d8d54091732b8441f352619 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.291 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 SMART SM00382 275 469 3.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 SMART SM00382 28 216 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 ProSitePatterns PS00211 ABC transporters family signature. 393 407 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 Gene3D G3DSA:3.40.50.300 3 220 2.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 Gene3D G3DSA:3.40.50.300 252 484 1.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 SUPERFAMILY SSF52540 237 479 2.82E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 PANTHER PTHR24220:SF308 5 379 1.2E-144 T 22-04-2016 HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 SUPERFAMILY SSF52540 4 220 1.15E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 PANTHER PTHR24220 5 379 1.2E-144 T 22-04-2016 HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 Pfam PF00005 ABC transporter 19 168 5.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07045 b9755100206af73df9159bf0880c485a 506 Pfam PF00005 ABC transporter 267 420 1.0E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09135 9146e3e0ab5ca43dc41858241e90f6a1 486 Pfam PF02687 FtsX-like permease family 323 434 5.2E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 57 4.5E-4 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 Pfam PF00953 Glycosyl transferase family 4 86 282 2.6E-35 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 PANTHER PTHR22926:SF5 4 216 4.9E-125 T 22-04-2016 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 PANTHER PTHR22926 4 216 4.9E-125 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 19 353 2.8E-91 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 PANTHER PTHR22926:SF5 232 359 4.9E-125 T 22-04-2016 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 PANTHER PTHR22926 232 359 4.9E-125 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 356 22.617 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02945 9decd97900842487b9f12f63cd23bf7f 368 ProSitePatterns PS01348 MraY family signature 2. 185 196 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 176 187 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 PANTHER PTHR30523:SF0 32 917 6.8E-220 T 22-04-2016 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 746 772 3.8E-45 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 175 188 3.8E-45 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 610 639 3.8E-45 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 286 301 3.8E-45 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 568 588 3.8E-45 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 226 242 3.8E-45 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 SUPERFAMILY SSF51621 42 917 6.28E-230 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 Gene3D G3DSA:1.20.1440.90 321 437 2.5E-19 T 22-04-2016 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 Pfam PF00311 Phosphoenolpyruvate carboxylase 171 459 9.2E-60 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 Pfam PF00311 Phosphoenolpyruvate carboxylase 462 917 5.3E-138 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 PANTHER PTHR30523 32 917 6.8E-220 T 22-04-2016 HMPREF9228_RS00220 0aca7171fbdf20a881bb8f3d0db33642 917 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 570 582 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 Gene3D G3DSA:1.20.1250.20 25 206 3.0E-37 T 22-04-2016 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 PANTHER PTHR23501 19 513 3.9E-133 T 22-04-2016 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 96 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 PANTHER PTHR23501:SF48 19 513 3.9E-133 T 22-04-2016 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 SUPERFAMILY SSF103473 24 216 1.92E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 SUPERFAMILY SSF103473 487 515 1.92E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 SUPERFAMILY SSF103473 262 433 1.92E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 Gene3D G3DSA:1.20.1250.20 489 515 6.3E-22 T 22-04-2016 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 Gene3D G3DSA:1.20.1250.20 273 434 6.3E-22 T 22-04-2016 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 7.0E-5 T 22-04-2016 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 PRINTS PR01036 Tetracycline resistance protein TetB signature 29 53 7.0E-5 T 22-04-2016 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 PRINTS PR01036 Tetracycline resistance protein TetB signature 414 433 7.0E-5 T 22-04-2016 HMPREF9228_RS01035 a7e148c176660ec6ab0ac06613c98c62 522 Pfam PF07690 Major Facilitator Superfamily 30 423 3.8E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 PANTHER PTHR22683 100 327 1.4E-70 T 22-04-2016 HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 SUPERFAMILY SSF52540 92 296 4.26E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 Pfam PF01580 FtsK/SpoIIIE family 106 301 1.3E-26 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 Gene3D G3DSA:3.40.50.300 404 509 7.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 SMART SM00382 129 301 0.019 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 SMART SM00382 402 530 0.0066 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 SUPERFAMILY SSF52540 384 538 3.19E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 Gene3D G3DSA:3.40.50.300 105 313 1.1E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05430 89fce5d595fb13a10029729e92fef3e0 572 PANTHER PTHR22683:SF1 100 327 1.4E-70 T 22-04-2016 HMPREF9228_RS01570 7db86c0f10f115cb55aee3b547d0a5ab 172 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 22 168 3.1E-28 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 HMPREF9228_RS01570 7db86c0f10f115cb55aee3b547d0a5ab 172 Pfam PF00430 ATP synthase B/B' CF(0) 18 147 1.0E-29 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 HMPREF9228_RS01570 7db86c0f10f115cb55aee3b547d0a5ab 172 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 168 12.285 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 HMPREF9228_RS01570 7db86c0f10f115cb55aee3b547d0a5ab 172 Gene3D G3DSA:1.20.5.620 74 132 1.2E-10 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain HMPREF9228_RS01570 7db86c0f10f115cb55aee3b547d0a5ab 172 SUPERFAMILY SSF81573 74 132 4.97E-10 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain HMPREF9228_RS01570 7db86c0f10f115cb55aee3b547d0a5ab 172 PANTHER PTHR33445 1 171 3.3E-33 T 22-04-2016 HMPREF9228_RS01760 0346903d7bf130d3df7d2cf54712f399 193 SUPERFAMILY SSF51445 16 176 2.25E-27 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS01760 0346903d7bf130d3df7d2cf54712f399 193 Gene3D G3DSA:3.20.20.80 74 176 1.9E-22 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS01760 0346903d7bf130d3df7d2cf54712f399 193 PANTHER PTHR10357 67 176 2.4E-33 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS01760 0346903d7bf130d3df7d2cf54712f399 193 Pfam PF00128 Alpha amylase, catalytic domain 102 176 3.1E-14 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS01760 0346903d7bf130d3df7d2cf54712f399 193 PANTHER PTHR10357:SF122 67 176 2.4E-33 T 22-04-2016 HMPREF9228_RS02305 4cb4678bf63158194333335f4e9290da 240 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 35 205 1.2E-31 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 HMPREF9228_RS02305 4cb4678bf63158194333335f4e9290da 240 Gene3D G3DSA:1.10.150.210 45 96 9.8E-25 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 HMPREF9228_RS02305 4cb4678bf63158194333335f4e9290da 240 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 28 238 8.1E-76 T 22-04-2016 HMPREF9228_RS02305 4cb4678bf63158194333335f4e9290da 240 SUPERFAMILY SSF56784 33 239 1.73E-49 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS02305 4cb4678bf63158194333335f4e9290da 240 PANTHER PTHR10000 28 239 9.3E-77 T 22-04-2016 HMPREF9228_RS02305 4cb4678bf63158194333335f4e9290da 240 Pfam PF12710 haloacid dehalogenase-like hydrolase 37 203 2.5E-22 T 22-04-2016 HMPREF9228_RS02305 4cb4678bf63158194333335f4e9290da 240 Gene3D G3DSA:3.40.50.1000 97 234 1.3E-44 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS02305 4cb4678bf63158194333335f4e9290da 240 PANTHER PTHR10000:SF7 28 239 9.3E-77 T 22-04-2016 HMPREF9228_RS04385 3101880967278b826422f68bc384aa13 147 SUPERFAMILY SSF103481 35 133 7.59E-8 T 22-04-2016 HMPREF9228_RS04385 3101880967278b826422f68bc384aa13 147 PANTHER PTHR22911:SF41 60 136 5.4E-16 T 22-04-2016 HMPREF9228_RS04385 3101880967278b826422f68bc384aa13 147 Pfam PF00892 EamA-like transporter family 59 131 3.0E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS04385 3101880967278b826422f68bc384aa13 147 PANTHER PTHR22911 60 136 5.4E-16 T 22-04-2016 HMPREF9228_RS04395 d61adad565a59957e61c1180e595556b 244 SUPERFAMILY SSF47598 1 45 1.42E-6 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 HMPREF9228_RS04395 d61adad565a59957e61c1180e595556b 244 Pfam PF03887 YfbU domain 53 210 1.1E-28 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU HMPREF9228_RS04395 d61adad565a59957e61c1180e595556b 244 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 53 199 2.0E-84 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU HMPREF9228_RS04395 d61adad565a59957e61c1180e595556b 244 SUPERFAMILY SSF116960 48 234 2.22E-49 T 22-04-2016 HMPREF9228_RS04395 d61adad565a59957e61c1180e595556b 244 Gene3D G3DSA:1.10.3190.10 104 234 2.4E-30 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 Pfam PF13361 UvrD-like helicase C-terminal domain 319 658 7.6E-72 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 PANTHER PTHR11070 12 705 3.2E-212 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 313 2.9E-67 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 PANTHER PTHR11070:SF7 12 705 3.2E-212 T 22-04-2016 HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 Gene3D G3DSA:3.40.50.300 216 327 1.5E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 Gene3D G3DSA:3.40.50.300 13 119 1.5E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 Gene3D G3DSA:1.10.10.160 123 215 1.5E-22 T 22-04-2016 IPR013986 DExx box DNA helicase domain HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 SUPERFAMILY SSF52540 14 687 3.13E-175 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 Gene3D G3DSA:3.40.50.300 597 688 8.2E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 Gene3D G3DSA:3.40.50.300 328 430 8.2E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04720 00ad39c78fc92c2d32b3068108b3ce31 891 Gene3D G3DSA:1.10.486.10 431 583 1.2E-46 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 282 295 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 SMART SM00917 471 635 2.0E-32 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 SUPERFAMILY SSF51569 61 369 5.49E-97 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 PANTHER PTHR10277:SF28 406 514 1.2E-254 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 PANTHER PTHR10277:SF28 36 385 1.2E-254 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 PANTHER PTHR10277:SF28 542 638 1.2E-254 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 79 95 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 44 636 53.418 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 Pfam PF00682 HMGL-like 72 352 3.4E-76 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 Gene3D G3DSA:3.20.20.70 51 443 2.4E-143 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 SUPERFAMILY SSF110921 549 633 5.49E-29 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 PANTHER PTHR10277 406 514 1.2E-254 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 PANTHER PTHR10277 36 385 1.2E-254 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 PANTHER PTHR10277 542 638 1.2E-254 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 SUPERFAMILY SSF89000 437 487 8.24E-15 T 22-04-2016 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 Pfam PF08502 LeuA allosteric (dimerisation) domain 471 634 2.1E-40 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 HMPREF9228_RS00895 737b9123ce0300c34f34732e665a0bc9 638 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 43 635 8.5E-240 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 HMPREF9228_RS09195 d9275f1a18bb5fb773da21e5fde6cfb2 290 Gene3D G3DSA:1.10.3720.10 6 278 2.6E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09195 d9275f1a18bb5fb773da21e5fde6cfb2 290 SUPERFAMILY SSF161098 49 277 9.03E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09195 d9275f1a18bb5fb773da21e5fde6cfb2 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 279 1.6E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09195 d9275f1a18bb5fb773da21e5fde6cfb2 290 PANTHER PTHR30193:SF6 3 290 5.1E-82 T 22-04-2016 HMPREF9228_RS09195 d9275f1a18bb5fb773da21e5fde6cfb2 290 PANTHER PTHR30193 3 290 5.1E-82 T 22-04-2016 HMPREF9228_RS05275 b3850b92741383d608fb8800e22417b8 161 Gene3D G3DSA:1.10.260.40 1 63 5.7E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS05275 b3850b92741383d608fb8800e22417b8 161 Pfam PF12674 Putative zinc ribbon domain 69 149 2.3E-26 T 22-04-2016 IPR025868 Putative zinc ribbon domain HMPREF9228_RS05275 b3850b92741383d608fb8800e22417b8 161 SUPERFAMILY SSF47413 1 66 3.49E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS05275 b3850b92741383d608fb8800e22417b8 161 SMART SM00530 6 61 2.2E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS05275 b3850b92741383d608fb8800e22417b8 161 Pfam PF01381 Helix-turn-helix 7 60 1.1E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS05275 b3850b92741383d608fb8800e22417b8 161 PANTHER PTHR10245 1 62 9.3E-15 T 22-04-2016 HMPREF9228_RS05785 c5e70a4b7508ebe00d0bc7b1759b5f4d 373 Pfam PF01883 Domain of unknown function DUF59 8 83 1.9E-13 T 22-04-2016 IPR002744 Domain of unknown function DUF59 HMPREF9228_RS05785 c5e70a4b7508ebe00d0bc7b1759b5f4d 373 SUPERFAMILY SSF117916 7 83 4.58E-14 T 22-04-2016 HMPREF9228_RS05785 c5e70a4b7508ebe00d0bc7b1759b5f4d 373 Hamap MF_02040 Iron-sulfur cluster carrier protein. 113 371 31.133 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein HMPREF9228_RS05785 c5e70a4b7508ebe00d0bc7b1759b5f4d 373 SUPERFAMILY SSF52540 122 348 1.31E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05785 c5e70a4b7508ebe00d0bc7b1759b5f4d 373 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 123 350 2.9E-71 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein HMPREF9228_RS05785 c5e70a4b7508ebe00d0bc7b1759b5f4d 373 PANTHER PTHR23264:SF19 1 348 1.9E-97 T 22-04-2016 HMPREF9228_RS05785 c5e70a4b7508ebe00d0bc7b1759b5f4d 373 Gene3D G3DSA:3.40.50.300 110 351 1.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05785 c5e70a4b7508ebe00d0bc7b1759b5f4d 373 PANTHER PTHR23264 1 348 1.9E-97 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein HMPREF9228_RS03800 e4b01dcf44662ece5745faf604a6ccad 525 PANTHER PTHR11785:SF399 56 502 4.0E-225 T 22-04-2016 HMPREF9228_RS03800 e4b01dcf44662ece5745faf604a6ccad 525 Pfam PF00324 Amino acid permease 66 511 4.4E-119 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS03800 e4b01dcf44662ece5745faf604a6ccad 525 PANTHER PTHR11785 56 502 4.0E-225 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS03800 e4b01dcf44662ece5745faf604a6ccad 525 PIRSF PIRSF006060 47 520 3.6E-80 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS03800 e4b01dcf44662ece5745faf604a6ccad 525 ProSitePatterns PS00218 Amino acid permeases signature. 91 122 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 HMPREF9228_RS07055 1e6bed2a16e603e9c060da5330627f29 82 Pfam PF01610 Transposase 4 65 4.4E-9 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 Pfam PF00107 Zinc-binding dehydrogenase 175 294 8.8E-12 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 SUPERFAMILY SSF51735 136 299 8.69E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 Gene3D G3DSA:3.90.180.10 1 165 5.2E-52 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 PANTHER PTHR11695 12 334 3.5E-91 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 133 5.1E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 SUPERFAMILY SSF50129 1 172 1.67E-52 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 PANTHER PTHR11695:SF429 12 334 3.5E-91 T 22-04-2016 HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 Gene3D G3DSA:3.40.50.720 166 280 1.9E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS08250 9a15efa384658edcc6e9a0a8fd284875 334 SMART SM00829 8 330 0.0011 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 HMPREF9228_RS04050 bab946255510faa0fca7d0e620cbcf36 139 SMART SM01323 1 80 3.9E-15 T 22-04-2016 IPR003849 Preprotein translocase YajC HMPREF9228_RS04050 bab946255510faa0fca7d0e620cbcf36 139 Pfam PF02699 Preprotein translocase subunit 1 78 4.7E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 SUPERFAMILY SSF52540 351 597 2.61E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 PANTHER PTHR24221 31 606 3.0E-187 T 22-04-2016 HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 Pfam PF00664 ABC transporter transmembrane region 39 315 1.2E-39 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 Pfam PF00005 ABC transporter 378 527 3.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 SMART SM00382 387 581 6.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 SUPERFAMILY SSF90123 21 342 3.14E-67 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 Gene3D G3DSA:1.20.1560.10 30 342 8.2E-58 T 22-04-2016 HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 Gene3D G3DSA:3.40.50.300 360 612 8.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS07125 8c9fb19f4a685e9ea6dc6adcc21a193c 652 PANTHER PTHR24221:SF240 31 606 3.0E-187 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PANTHER PTHR24093 15 418 1.2E-210 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PANTHER PTHR24093 444 858 1.2E-210 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 466 484 1.0E-11 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 1.0E-11 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 580 596 1.0E-11 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 639 664 1.0E-11 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PANTHER PTHR24093:SF298 15 418 1.2E-210 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PANTHER PTHR24093:SF298 444 858 1.2E-210 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 315 321 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 SUPERFAMILY SSF81665 14 107 3.01E-60 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 SUPERFAMILY SSF81665 205 307 3.01E-60 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 SUPERFAMILY SSF81665 657 848 3.01E-60 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 643 3.2E-18 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.2E-18 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 608 627 3.2E-18 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 538 3.2E-18 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 313 327 3.2E-18 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 334 8.6E-28 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 575 696 8.2E-25 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 Pfam PF00702 haloacid dehalogenase-like hydrolase 310 622 6.5E-19 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 SUPERFAMILY SSF56784 508 654 1.14E-32 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 Gene3D G3DSA:3.40.1110.10 367 489 2.1E-6 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 SUPERFAMILY SSF81653 109 199 7.59E-23 T 22-04-2016 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 Gene3D G3DSA:2.70.150.10 14 50 1.8E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 Gene3D G3DSA:2.70.150.10 102 200 1.8E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 SUPERFAMILY SSF81660 439 492 2.35E-5 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 SUPERFAMILY SSF81660 388 412 2.35E-5 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 Gene3D G3DSA:1.20.1110.10 55 101 7.0E-45 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 Gene3D G3DSA:1.20.1110.10 577 847 7.0E-45 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain HMPREF9228_RS03275 755d662542435eba7911a72c0f257a5c 870 Pfam PF00122 E1-E2 ATPase 75 304 3.4E-54 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 HMPREF9228_RS02720 11e6ab352fb7da59f7ec4bb7cad3203c 158 PANTHER PTHR35798:SF1 69 145 7.5E-21 T 22-04-2016 HMPREF9228_RS02720 11e6ab352fb7da59f7ec4bb7cad3203c 158 PANTHER PTHR35798 69 145 7.5E-21 T 22-04-2016 HMPREF9228_RS02720 11e6ab352fb7da59f7ec4bb7cad3203c 158 Pfam PF04472 Protein of unknown function (DUF552) 70 141 1.6E-22 T 22-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 HMPREF9228_RS02720 11e6ab352fb7da59f7ec4bb7cad3203c 158 Hamap MF_01197 Cell division protein SepF [sepF]. 2 149 19.758 T 22-04-2016 IPR023052 Cell division protein SepF GO:0090529 HMPREF9228_RS05955 5759bdff0d1a46a1a3cb27e9bef76dd7 235 Gene3D G3DSA:3.30.420.10 31 205 1.8E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05955 5759bdff0d1a46a1a3cb27e9bef76dd7 235 SUPERFAMILY SSF53098 31 205 1.66E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05955 5759bdff0d1a46a1a3cb27e9bef76dd7 235 Pfam PF00929 Exonuclease 35 193 5.9E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III HMPREF9228_RS05955 5759bdff0d1a46a1a3cb27e9bef76dd7 235 PANTHER PTHR30231 33 205 3.2E-38 T 22-04-2016 HMPREF9228_RS05955 5759bdff0d1a46a1a3cb27e9bef76dd7 235 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 34 223 1.4E-22 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS05955 5759bdff0d1a46a1a3cb27e9bef76dd7 235 SMART SM00479 33 206 3.5E-34 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 TIGRFAM TIGR03356 BGL: beta-galactosidase 5 449 4.3E-161 T 22-04-2016 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7089|MetaCyc: PWY-7091|MetaCyc: PWY-7092 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 Pfam PF00232 Glycosyl hydrolase family 1 2 456 2.1E-145 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 PANTHER PTHR10353 4 463 7.1E-174 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 PANTHER PTHR10353:SF36 4 463 7.1E-174 T 22-04-2016 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 Gene3D G3DSA:3.20.20.80 3 461 1.4E-148 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 SUPERFAMILY SSF51445 3 460 1.34E-151 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 281 295 1.2E-20 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 382 393 1.2E-20 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 355 363 1.2E-20 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 403 420 1.2E-20 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 427 439 1.2E-20 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS06115 18d7f30d2414d636ac2415c5c6ec720a 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site HMPREF9228_RS07305 f7ab8b4fd403257cb7292fdeb82f61c5 294 Pfam PF03729 Short repeat of unknown function (DUF308) 188 257 0.02 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane HMPREF9228_RS07305 f7ab8b4fd403257cb7292fdeb82f61c5 294 Pfam PF03729 Short repeat of unknown function (DUF308) 129 200 4.6E-8 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane HMPREF9228_RS07305 f7ab8b4fd403257cb7292fdeb82f61c5 294 Pfam PF03729 Short repeat of unknown function (DUF308) 245 290 0.0018 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane HMPREF9228_RS02745 a559e92d29b654654aa4ebda77de09b2 349 Pfam PF13280 WYL domain 150 341 9.9E-24 T 22-04-2016 IPR026881 WYL domain HMPREF9228_RS02745 a559e92d29b654654aa4ebda77de09b2 349 Gene3D G3DSA:1.10.10.10 17 60 6.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 PANTHER PTHR10587:SF85 349 462 2.7E-33 T 22-04-2016 HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 PANTHER PTHR10587:SF85 33 200 2.7E-33 T 22-04-2016 HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 Gene3D G3DSA:3.90.550.10 232 233 1.3E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 Gene3D G3DSA:3.90.550.10 134 191 1.3E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 Gene3D G3DSA:3.90.550.10 368 529 1.3E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 PANTHER PTHR10587 349 462 2.7E-33 T 22-04-2016 HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 PANTHER PTHR10587 33 200 2.7E-33 T 22-04-2016 HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 SUPERFAMILY SSF53448 313 333 4.57E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 SUPERFAMILY SSF53448 361 533 4.57E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 SUPERFAMILY SSF53448 131 194 4.57E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS06010 e8286cdf299b79747770284a9413bbb9 755 Pfam PF13632 Glycosyl transferase family group 2 368 589 3.3E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS02690 76e01ef6d85523aec97085c9a5b64d49 402 ProSitePatterns PS00674 AAA-protein family signature. 290 308 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 HMPREF9228_RS02690 76e01ef6d85523aec97085c9a5b64d49 402 Gene3D G3DSA:1.10.8.60 328 393 9.7E-15 T 22-04-2016 HMPREF9228_RS02690 76e01ef6d85523aec97085c9a5b64d49 402 SUPERFAMILY SSF52540 151 395 5.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02690 76e01ef6d85523aec97085c9a5b64d49 402 PANTHER PTHR23077 119 398 3.8E-78 T 22-04-2016 HMPREF9228_RS02690 76e01ef6d85523aec97085c9a5b64d49 402 SMART SM00382 186 318 8.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02690 76e01ef6d85523aec97085c9a5b64d49 402 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 319 2.7E-40 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 HMPREF9228_RS02690 76e01ef6d85523aec97085c9a5b64d49 402 Gene3D G3DSA:3.40.50.300 148 327 5.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07160 5e06fb42f3efe3a2ade3ac12ecaa4471 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 5.7E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS07160 5e06fb42f3efe3a2ade3ac12ecaa4471 204 SUPERFAMILY SSF46689 2 64 1.08E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS07160 5e06fb42f3efe3a2ade3ac12ecaa4471 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS07160 5e06fb42f3efe3a2ade3ac12ecaa4471 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS07160 5e06fb42f3efe3a2ade3ac12ecaa4471 204 Gene3D G3DSA:1.10.357.10 2 183 9.2E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS09475 9de1cd7299a58cebd137ee9f82b89c92 252 Gene3D G3DSA:3.40.50.1820 40 244 4.3E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS09475 9de1cd7299a58cebd137ee9f82b89c92 252 PANTHER PTHR10655 46 242 8.3E-15 T 22-04-2016 HMPREF9228_RS09475 9de1cd7299a58cebd137ee9f82b89c92 252 PANTHER PTHR10655:SF17 46 242 8.3E-15 T 22-04-2016 HMPREF9228_RS09475 9de1cd7299a58cebd137ee9f82b89c92 252 SUPERFAMILY SSF53474 40 244 1.97E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS09475 9de1cd7299a58cebd137ee9f82b89c92 252 Pfam PF02230 Phospholipase/Carboxylesterase 42 242 4.2E-17 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 HMPREF9228_RS01105 8bbbdcd33cc6ee78babce1edaaaf561c 557 Gene3D G3DSA:1.10.443.10 217 406 1.6E-26 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS01105 8bbbdcd33cc6ee78babce1edaaaf561c 557 Pfam PF00589 Phage integrase family 221 400 1.5E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS01105 8bbbdcd33cc6ee78babce1edaaaf561c 557 Gene3D G3DSA:1.10.150.130 98 161 1.4E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal HMPREF9228_RS01105 8bbbdcd33cc6ee78babce1edaaaf561c 557 PANTHER PTHR30349:SF20 96 429 1.9E-30 T 22-04-2016 HMPREF9228_RS01105 8bbbdcd33cc6ee78babce1edaaaf561c 557 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 157 9.8E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 HMPREF9228_RS01105 8bbbdcd33cc6ee78babce1edaaaf561c 557 PANTHER PTHR30349 96 429 1.9E-30 T 22-04-2016 HMPREF9228_RS01105 8bbbdcd33cc6ee78babce1edaaaf561c 557 SUPERFAMILY SSF56349 98 405 3.77E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 SUPERFAMILY SSF55486 21 191 1.37E-185 T 22-04-2016 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 SUPERFAMILY SSF55486 222 727 1.37E-185 T 22-04-2016 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 Pfam PF05649 Peptidase family M13 23 438 3.1E-90 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 Gene3D G3DSA:3.40.390.10 483 727 4.5E-109 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 Gene3D G3DSA:3.40.390.10 322 442 4.5E-109 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 502 514 2.8E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 605 616 2.8E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 523 539 2.8E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 484 496 2.8E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 PANTHER PTHR11733 215 727 1.9E-163 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 PANTHER PTHR11733 21 184 1.9E-163 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 Pfam PF01431 Peptidase family M13 492 724 4.0E-70 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 PANTHER PTHR11733:SF65 215 727 1.9E-163 T 22-04-2016 HMPREF9228_RS07310 c12118af211ee330f50b26f136d3a329 727 PANTHER PTHR11733:SF65 21 184 1.9E-163 T 22-04-2016 HMPREF9228_RS09190 52baf0803a9becb87c9c24937d46b271 277 Gene3D G3DSA:1.10.3720.10 5 264 2.5E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09190 52baf0803a9becb87c9c24937d46b271 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 268 3.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09190 52baf0803a9becb87c9c24937d46b271 277 SUPERFAMILY SSF161098 6 277 2.62E-67 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09190 52baf0803a9becb87c9c24937d46b271 277 PANTHER PTHR32243 1 277 2.0E-82 T 22-04-2016 HMPREF9228_RS02210 c78f06c54c554137af934ab7f7a790b9 159 Pfam PF00872 Transposase, Mutator family 1 133 4.2E-28 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 HMPREF9228_RS02210 c78f06c54c554137af934ab7f7a790b9 159 PANTHER PTHR33217:SF2 1 130 8.6E-30 T 22-04-2016 HMPREF9228_RS02210 c78f06c54c554137af934ab7f7a790b9 159 PANTHER PTHR33217 1 130 8.6E-30 T 22-04-2016 HMPREF9228_RS02340 ae7494f5c392ba50dad6eacfe81906bf 103 Gene3D G3DSA:3.40.50.2300 1 99 1.1E-38 T 22-04-2016 HMPREF9228_RS02340 ae7494f5c392ba50dad6eacfe81906bf 103 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 2.0E-32 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 HMPREF9228_RS02340 ae7494f5c392ba50dad6eacfe81906bf 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 1.4E-19 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 HMPREF9228_RS02340 ae7494f5c392ba50dad6eacfe81906bf 103 SUPERFAMILY SSF52794 2 99 2.44E-33 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 HMPREF9228_RS02340 ae7494f5c392ba50dad6eacfe81906bf 103 PANTHER PTHR30505 1 102 6.3E-38 T 22-04-2016 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 282 440 3.2E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 Hamap MF_00900 GTPase HflX [hflX]. 102 472 46.01 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 82 442 1.2E-127 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 PANTHER PTHR10229:SF0 42 487 1.4E-153 T 22-04-2016 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 Gene3D G3DSA:3.40.50.300 281 444 5.0E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 SUPERFAMILY SSF52540 281 451 1.4E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 Pfam PF16360 GTP-binding GTPase Middle Region 189 275 5.9E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 PANTHER PTHR10229 42 487 1.4E-153 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 PIRSF PIRSF006809 72 500 4.0E-147 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 Pfam PF13167 GTP-binding GTPase N-terminal 99 187 2.1E-31 T 22-04-2016 IPR025121 GTPase HflX, N-terminal HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 350 368 7.9E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 283 303 7.9E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS02875 663e749cce326c5417e474d321a9f41f 501 Pfam PF01926 50S ribosome-binding GTPase 283 402 1.0E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 HMPREF9228_RS06785 eb6bb7512394b2cc4337db10619d5ba2 169 Gene3D G3DSA:3.40.1280.10 8 168 9.8E-52 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS06785 eb6bb7512394b2cc4337db10619d5ba2 169 PANTHER PTHR12029:SF31 20 167 3.4E-55 T 22-04-2016 HMPREF9228_RS06785 eb6bb7512394b2cc4337db10619d5ba2 169 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 15 166 29.474 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 HMPREF9228_RS06785 eb6bb7512394b2cc4337db10619d5ba2 169 PANTHER PTHR12029 20 167 3.4E-55 T 22-04-2016 HMPREF9228_RS06785 eb6bb7512394b2cc4337db10619d5ba2 169 PIRSF PIRSF029256 14 169 9.9E-50 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 HMPREF9228_RS06785 eb6bb7512394b2cc4337db10619d5ba2 169 Pfam PF00588 SpoU rRNA Methylase family 18 157 4.4E-22 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 HMPREF9228_RS06785 eb6bb7512394b2cc4337db10619d5ba2 169 SUPERFAMILY SSF75217 16 167 4.64E-34 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS03830 55421609b515ba6fbeb874141a4127a1 296 Gene3D G3DSA:2.40.50.100 85 116 7.1E-4 T 22-04-2016 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 27 108 2.2E-35 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 107 290 1.0E-87 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 Hamap MF_00008 Thymidylate synthase [thyA]. 24 290 44.211 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 PRINTS PR00108 Thymidylate synthase family signature 65 86 7.2E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 PRINTS PR00108 Thymidylate synthase family signature 168 183 7.2E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 PRINTS PR00108 Thymidylate synthase family signature 142 161 7.2E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 PRINTS PR00108 Thymidylate synthase family signature 224 241 7.2E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 PRINTS PR00108 Thymidylate synthase family signature 186 212 7.2E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 SUPERFAMILY SSF55831 22 290 1.02E-124 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 ProSitePatterns PS00091 Thymidylate synthase active site. 153 181 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 Gene3D G3DSA:3.30.572.10 27 290 1.8E-128 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 PANTHER PTHR11548 25 290 1.9E-182 T 22-04-2016 HMPREF9228_RS07805 86c92ac165db988655f6a1b55859acda 290 Pfam PF00303 Thymidylate synthase 27 290 6.7E-122 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 HMPREF9228_RS04450 24aef2668332bb289659302eb929a775 546 PANTHER PTHR30290:SF10 1 533 9.2E-107 T 22-04-2016 HMPREF9228_RS04450 24aef2668332bb289659302eb929a775 546 Gene3D G3DSA:3.40.190.10 207 326 1.1E-28 T 22-04-2016 HMPREF9228_RS04450 24aef2668332bb289659302eb929a775 546 Gene3D G3DSA:3.90.76.10 53 206 1.0E-39 T 22-04-2016 HMPREF9228_RS04450 24aef2668332bb289659302eb929a775 546 SUPERFAMILY SSF53850 39 543 1.99E-105 T 22-04-2016 HMPREF9228_RS04450 24aef2668332bb289659302eb929a775 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 462 3.0E-64 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain HMPREF9228_RS04450 24aef2668332bb289659302eb929a775 546 PANTHER PTHR30290 1 533 9.2E-107 T 22-04-2016 HMPREF9228_RS04450 24aef2668332bb289659302eb929a775 546 PIRSF PIRSF002741 3 539 7.3E-74 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 HMPREF9228_RS04450 24aef2668332bb289659302eb929a775 546 Gene3D G3DSA:3.10.105.10 327 517 2.6E-46 T 22-04-2016 HMPREF9228_RS06020 6365a80f1b4f88f3a777a22a7a047494 356 Pfam PF03547 Membrane transport protein 8 155 2.7E-16 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 HMPREF9228_RS06020 6365a80f1b4f88f3a777a22a7a047494 356 Pfam PF03547 Membrane transport protein 202 350 7.2E-12 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 PIRSF PIRSF001338 4 166 3.6E-71 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 SMART SM01001 7 158 6.9E-102 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 Pfam PF00731 AIR carboxylase 8 156 3.6E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 9 165 6.6E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 PANTHER PTHR23046:SF2 3 165 9.7E-88 T 22-04-2016 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 SUPERFAMILY SSF52255 8 164 9.81E-67 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 Gene3D G3DSA:3.40.50.7700 3 165 6.8E-77 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 PANTHER PTHR23046 3 165 9.7E-88 T 22-04-2016 HMPREF9228_RS06425 76e366a16d360c77d8d560979140ede6 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 9 162 33.847 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 HMPREF9228_RS00580 6d5452de3c0d81ca22acb07a4b08fcb4 267 Pfam PF05857 TraX protein 46 263 1.7E-11 T 22-04-2016 IPR008875 TraX HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PIRSF PIRSF000724 1 401 1.5E-138 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PANTHER PTHR11406 2 401 5.6E-205 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 Gene3D G3DSA:3.40.50.1270 182 390 5.5E-82 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 108 123 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 318 343 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 354 365 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 378 395 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 6.5E-90 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 401 40.789 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 Pfam PF00162 Phosphoglycerate kinase 5 392 8.2E-152 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 Gene3D G3DSA:3.40.50.1260 1 181 1.1E-67 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS04185 24663f48184c8a78c12f85d15cdd3a22 401 SUPERFAMILY SSF53748 2 401 2.83E-148 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 HMPREF9228_RS01030 235a2749c9b98cc10a38625fcd33ee40 550 Pfam PF04326 Putative DNA-binding domain 8 113 6.9E-15 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 HMPREF9228_RS01030 235a2749c9b98cc10a38625fcd33ee40 550 SUPERFAMILY SSF46785 413 488 6.52E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS01030 235a2749c9b98cc10a38625fcd33ee40 550 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 300 377 1.5E-12 T 22-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain HMPREF9228_RS01030 235a2749c9b98cc10a38625fcd33ee40 550 PANTHER PTHR30595 26 472 5.1E-16 T 22-04-2016 HMPREF9228_RS01030 235a2749c9b98cc10a38625fcd33ee40 550 Gene3D G3DSA:1.10.10.10 414 464 5.1E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS01030 235a2749c9b98cc10a38625fcd33ee40 550 PANTHER PTHR30595:SF3 26 472 5.1E-16 T 22-04-2016 HMPREF9228_RS00295 69863be1e2ac8e2a0da41e6c1a08b808 262 PANTHER PTHR37313:SF2 18 251 9.1E-46 T 22-04-2016 HMPREF9228_RS00295 69863be1e2ac8e2a0da41e6c1a08b808 262 PANTHER PTHR37313 18 251 9.1E-46 T 22-04-2016 HMPREF9228_RS00295 69863be1e2ac8e2a0da41e6c1a08b808 262 Pfam PF05949 Bacterial protein of unknown function (DUF881) 102 247 2.8E-35 T 22-04-2016 IPR010273 Protein of unknown function DUF881 HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 PANTHER PTHR11088 2 289 2.1E-80 T 22-04-2016 HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 Gene3D G3DSA:3.40.50.300 1 174 8.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 Gene3D G3DSA:1.10.287.890 200 277 3.4E-19 T 22-04-2016 HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 SUPERFAMILY SSF52540 5 154 1.21E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 297 27.409 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 SUPERFAMILY SSF52540 4 105 6.15E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 SUPERFAMILY SSF52540 179 260 6.15E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 288 9.1E-68 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 HMPREF9228_RS03315 e5727138c3aad7a40623c39427a49d48 327 Pfam PF01715 IPP transferase 42 280 2.6E-72 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 PANTHER PTHR13767 7 101 1.3E-77 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 PANTHER PTHR13767 123 187 1.3E-77 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 PANTHER PTHR13767 206 253 1.3E-77 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 222 253 7.2E-9 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 6 381 18.276 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 125 221 4.9E-19 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 29 94 1.9E-23 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 326 382 2.1E-14 T 22-04-2016 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 SUPERFAMILY SSF55120 6 105 1.2E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS08015 e8d7f94e1b7b2613514c043fd560cc7d 384 SUPERFAMILY SSF55120 132 254 1.2E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 HMPREF9228_RS09130 88fac744ca3d3222b201a7cc16def1b3 482 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 136 300 5.6E-35 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain HMPREF9228_RS09130 88fac744ca3d3222b201a7cc16def1b3 482 PANTHER PTHR33392:SF7 42 413 1.5E-60 T 22-04-2016 HMPREF9228_RS09130 88fac744ca3d3222b201a7cc16def1b3 482 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 136 300 4.2E-37 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain HMPREF9228_RS09130 88fac744ca3d3222b201a7cc16def1b3 482 PANTHER PTHR33392 42 413 1.5E-60 T 22-04-2016 HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 Pfam PF16193 AAA C-terminal domain 197 281 7.0E-25 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 Gene3D G3DSA:1.20.272.10 263 361 4.8E-43 T 22-04-2016 HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 SMART SM00382 59 175 8.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 SUPERFAMILY SSF48019 267 450 1.36E-72 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 Pfam PF12002 MgsA AAA+ ATPase C terminal 282 447 8.3E-69 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 Gene3D G3DSA:1.10.3710.10 363 452 1.6E-31 T 22-04-2016 HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 Gene3D G3DSA:3.40.50.300 15 174 2.8E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 21 144 4.0E-16 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 SUPERFAMILY SSF52540 12 237 1.49E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 PANTHER PTHR13779 18 448 3.3E-176 T 22-04-2016 HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 PANTHER PTHR13779:SF7 18 448 3.3E-176 T 22-04-2016 HMPREF9228_RS02575 ea007f7c3ee098ec362a288b02072446 459 Gene3D G3DSA:1.10.8.60 177 231 2.0E-8 T 22-04-2016 HMPREF9228_RS03555 e853d6de43954a02529b0b73fd898144 311 PANTHER PTHR12715 22 301 8.2E-34 T 22-04-2016 HMPREF9228_RS03555 e853d6de43954a02529b0b73fd898144 311 SUPERFAMILY SSF103481 57 156 3.66E-8 T 22-04-2016 HMPREF9228_RS03555 e853d6de43954a02529b0b73fd898144 311 Pfam PF00892 EamA-like transporter family 164 300 9.5E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS03555 e853d6de43954a02529b0b73fd898144 311 Pfam PF00892 EamA-like transporter family 25 153 1.1E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS03555 e853d6de43954a02529b0b73fd898144 311 SUPERFAMILY SSF103481 199 302 4.84E-12 T 22-04-2016 HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 PANTHER PTHR13734:SF5 11 471 6.7E-100 T 22-04-2016 HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 PANTHER PTHR13734 11 471 6.7E-100 T 22-04-2016 HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 Gene3D G3DSA:3.30.460.10 5 152 1.8E-41 T 22-04-2016 HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 Gene3D G3DSA:1.10.3090.10 413 435 8.6E-57 T 22-04-2016 HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 Gene3D G3DSA:1.10.3090.10 153 345 8.6E-57 T 22-04-2016 HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 9 467 8.9E-205 T 22-04-2016 IPR014065 tRNA adenylyltransferase HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 SUPERFAMILY SSF81301 3 149 7.96E-36 T 22-04-2016 HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 Pfam PF01966 HD domain 255 378 3.8E-12 T 22-04-2016 IPR006674 HD domain HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 180 241 4.1E-21 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 TIGRFAM TIGR00277 HDIG: HDIG domain 252 330 3.8E-13 T 22-04-2016 IPR006675 HDIG domain HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 SMART SM00471 251 412 0.0015 T 22-04-2016 IPR003607 HD/PDEase domain HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 Pfam PF01743 Poly A polymerase head domain 25 153 1.6E-29 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 HMPREF9228_RS09715 48d354c9adae18a9e7805da8d19c4c84 472 SUPERFAMILY SSF81891 151 467 1.96E-65 T 22-04-2016 HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 SMART SM00382 379 551 3.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 Pfam PF00664 ABC transporter transmembrane region 47 304 1.8E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 Gene3D G3DSA:3.40.50.300 353 584 2.9E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 Gene3D G3DSA:1.20.1560.10 24 336 1.1E-72 T 22-04-2016 HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 PANTHER PTHR24221:SF191 7 598 9.6E-299 T 22-04-2016 HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 SUPERFAMILY SSF52540 342 590 5.12E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 SUPERFAMILY SSF90123 24 341 2.75E-73 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 PANTHER PTHR24221 7 598 9.6E-299 T 22-04-2016 HMPREF9228_RS09165 8dfedcb263853c27d53aa0c2ecd49513 601 Pfam PF00005 ABC transporter 371 519 3.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS00375 c2740694f105f84315eeac7571773dcd 874 PANTHER PTHR34697 335 855 5.9E-49 T 22-04-2016 HMPREF9228_RS00375 c2740694f105f84315eeac7571773dcd 874 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 523 839 2.2E-98 T 22-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal HMPREF9228_RS09315 9efc071701ad5d33055d3109c29aa5d0 507 PIRSF PIRSF006060 9 506 3.8E-58 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS09315 9efc071701ad5d33055d3109c29aa5d0 507 Pfam PF00324 Amino acid permease 37 471 4.4E-77 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS09315 9efc071701ad5d33055d3109c29aa5d0 507 PANTHER PTHR11785:SF29 225 484 2.0E-113 T 22-04-2016 HMPREF9228_RS09315 9efc071701ad5d33055d3109c29aa5d0 507 PANTHER PTHR11785:SF29 1 199 2.0E-113 T 22-04-2016 HMPREF9228_RS09315 9efc071701ad5d33055d3109c29aa5d0 507 PANTHER PTHR11785 225 484 2.0E-113 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS09315 9efc071701ad5d33055d3109c29aa5d0 507 PANTHER PTHR11785 1 199 2.0E-113 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS09315 9efc071701ad5d33055d3109c29aa5d0 507 ProSitePatterns PS00218 Amino acid permeases signature. 62 92 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 HMPREF9228_RS01470 2fd5cdf651602c9a04c54bbc87b0d788 440 PANTHER PTHR30061 1 431 4.3E-57 T 22-04-2016 HMPREF9228_RS01470 2fd5cdf651602c9a04c54bbc87b0d788 440 Gene3D G3DSA:3.40.190.10 38 160 7.0E-6 T 22-04-2016 HMPREF9228_RS01470 2fd5cdf651602c9a04c54bbc87b0d788 440 Pfam PF13416 Bacterial extracellular solute-binding protein 56 356 1.2E-34 T 22-04-2016 HMPREF9228_RS01470 2fd5cdf651602c9a04c54bbc87b0d788 440 Gene3D G3DSA:3.40.190.10 161 357 4.1E-33 T 22-04-2016 HMPREF9228_RS01470 2fd5cdf651602c9a04c54bbc87b0d788 440 SUPERFAMILY SSF53850 22 438 1.5E-66 T 22-04-2016 HMPREF9228_RS05370 bd6223ad69b4ad30fc34c544b4231244 197 SUPERFAMILY SSF141259 2 68 1.31E-13 T 22-04-2016 IPR003711 CarD-like/TRCF domain HMPREF9228_RS05370 bd6223ad69b4ad30fc34c544b4231244 197 SMART SM01058 2 113 2.5E-31 T 22-04-2016 IPR003711 CarD-like/TRCF domain HMPREF9228_RS05370 bd6223ad69b4ad30fc34c544b4231244 197 PANTHER PTHR38447 1 196 3.7E-45 T 22-04-2016 HMPREF9228_RS05370 bd6223ad69b4ad30fc34c544b4231244 197 Pfam PF02559 CarD-like/TRCF domain 3 111 1.8E-14 T 22-04-2016 IPR003711 CarD-like/TRCF domain HMPREF9228_RS09535 2e36e09cfc21da6be25aa2668b150561 470 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 83 220 4.7E-10 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 HMPREF9228_RS09535 2e36e09cfc21da6be25aa2668b150561 470 Gene3D G3DSA:1.10.510.10 151 200 3.3E-4 T 22-04-2016 HMPREF9228_RS09535 2e36e09cfc21da6be25aa2668b150561 470 SUPERFAMILY SSF56112 63 191 3.16E-10 T 22-04-2016 IPR011009 Protein kinase-like domain HMPREF9228_RS09535 2e36e09cfc21da6be25aa2668b150561 470 Pfam PF13224 Domain of unknown function (DUF4032) 259 421 2.6E-70 T 22-04-2016 IPR025111 Domain of unknown function DUF4032 HMPREF9228_RS08870 b89eca26bdbfe40bb03d49f73426d716 441 PANTHER PTHR21090 375 439 4.2E-121 T 22-04-2016 HMPREF9228_RS08870 b89eca26bdbfe40bb03d49f73426d716 441 PANTHER PTHR21090 6 358 4.2E-121 T 22-04-2016 HMPREF9228_RS08870 b89eca26bdbfe40bb03d49f73426d716 441 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 8 439 3.1E-131 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 HMPREF9228_RS08870 b89eca26bdbfe40bb03d49f73426d716 441 Gene3D G3DSA:3.65.10.10 231 439 2.8E-45 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 HMPREF9228_RS08870 b89eca26bdbfe40bb03d49f73426d716 441 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 433 3.5E-59 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 HMPREF9228_RS08870 b89eca26bdbfe40bb03d49f73426d716 441 Gene3D G3DSA:3.65.10.10 26 230 1.2E-53 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 HMPREF9228_RS08870 b89eca26bdbfe40bb03d49f73426d716 441 SUPERFAMILY SSF55205 8 440 1.03E-111 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 HMPREF9228_RS06510 ef0793a060d90e4270f2bbbdf16d48a2 392 PANTHER PTHR10283:SF95 16 362 1.6E-21 T 22-04-2016 HMPREF9228_RS06510 ef0793a060d90e4270f2bbbdf16d48a2 392 PANTHER PTHR10283 16 362 1.6E-21 T 22-04-2016 HMPREF9228_RS06510 ef0793a060d90e4270f2bbbdf16d48a2 392 PRINTS PR00758 Arsenical pump membrane protein signature 332 357 8.5E-5 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 HMPREF9228_RS06510 ef0793a060d90e4270f2bbbdf16d48a2 392 PRINTS PR00758 Arsenical pump membrane protein signature 162 185 8.5E-5 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 HMPREF9228_RS06510 ef0793a060d90e4270f2bbbdf16d48a2 392 PRINTS PR00758 Arsenical pump membrane protein signature 87 111 8.5E-5 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 HMPREF9228_RS06510 ef0793a060d90e4270f2bbbdf16d48a2 392 Pfam PF03600 Citrate transporter 16 324 3.9E-10 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 HMPREF9228_RS00915 d5aca45cadc99f17655a4adfb265a860 206 PANTHER PTHR10344 1 205 2.4E-65 T 22-04-2016 HMPREF9228_RS00915 d5aca45cadc99f17655a4adfb265a860 206 Gene3D G3DSA:3.40.50.300 4 204 4.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00915 d5aca45cadc99f17655a4adfb265a860 206 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 30.558 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 HMPREF9228_RS00915 d5aca45cadc99f17655a4adfb265a860 206 PANTHER PTHR10344:SF0 1 205 2.4E-65 T 22-04-2016 HMPREF9228_RS00915 d5aca45cadc99f17655a4adfb265a860 206 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 HMPREF9228_RS00915 d5aca45cadc99f17655a4adfb265a860 206 Pfam PF02223 Thymidylate kinase 8 198 3.0E-50 T 22-04-2016 HMPREF9228_RS00915 d5aca45cadc99f17655a4adfb265a860 206 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 2.1E-52 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 HMPREF9228_RS00915 d5aca45cadc99f17655a4adfb265a860 206 SUPERFAMILY SSF52540 1 203 4.39E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03410 76e1bd9956789a32809517af4cecb022 402 Gene3D G3DSA:1.20.1250.20 5 177 2.2E-19 T 22-04-2016 HMPREF9228_RS03410 76e1bd9956789a32809517af4cecb022 402 Pfam PF07690 Major Facilitator Superfamily 10 254 9.9E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS03410 76e1bd9956789a32809517af4cecb022 402 Gene3D G3DSA:1.20.1250.20 227 392 1.7E-14 T 22-04-2016 HMPREF9228_RS03410 76e1bd9956789a32809517af4cecb022 402 PANTHER PTHR23514 4 393 2.1E-47 T 22-04-2016 HMPREF9228_RS03410 76e1bd9956789a32809517af4cecb022 402 SUPERFAMILY SSF103473 4 397 1.57E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS05805 1ae87113bac2a4b364b48ffa200f5256 261 Pfam PF00005 ABC transporter 43 185 5.4E-13 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS05805 1ae87113bac2a4b364b48ffa200f5256 261 SMART SM00382 42 234 1.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05805 1ae87113bac2a4b364b48ffa200f5256 261 SUPERFAMILY SSF52540 17 88 1.25E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05805 1ae87113bac2a4b364b48ffa200f5256 261 SUPERFAMILY SSF52540 141 256 1.25E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05805 1ae87113bac2a4b364b48ffa200f5256 261 Gene3D G3DSA:3.40.50.300 43 246 1.9E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05805 1ae87113bac2a4b364b48ffa200f5256 261 PANTHER PTHR24220 19 232 7.4E-20 T 22-04-2016 HMPREF9228_RS05805 1ae87113bac2a4b364b48ffa200f5256 261 PANTHER PTHR24220:SF557 19 232 7.4E-20 T 22-04-2016 HMPREF9228_RS01620 334aa2bbb1b81953a7cd3656da460a89 323 Pfam PF14561 Tetratricopeptide repeat 236 323 1.3E-23 T 22-04-2016 HMPREF9228_RS01620 334aa2bbb1b81953a7cd3656da460a89 323 SUPERFAMILY SSF52833 61 148 5.72E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS01620 334aa2bbb1b81953a7cd3656da460a89 323 Gene3D G3DSA:1.25.40.10 239 323 1.2E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS01620 334aa2bbb1b81953a7cd3656da460a89 323 Gene3D G3DSA:3.40.30.10 43 147 7.9E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS01620 334aa2bbb1b81953a7cd3656da460a89 323 SUPERFAMILY SSF48452 186 278 1.08E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 SUPERFAMILY SSF48179 175 270 5.95E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 PIRSF PIRSF000193 4 273 3.7E-68 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 Gene3D G3DSA:1.10.3730.10 175 271 1.8E-32 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 176 271 4.2E-30 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 PANTHER PTHR11645 3 270 7.1E-75 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 102 1.0E-19 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 SUPERFAMILY SSF51735 6 171 1.48E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 270 1.0E-67 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 Gene3D G3DSA:3.40.50.720 4 168 5.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS04990 5fa57de0f51706da0dde2a368929e5b4 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 271 21.117 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 7 154 1.3E-31 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 Pfam PF01327 Polypeptide deformylase 4 149 1.8E-36 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 Gene3D G3DSA:3.90.45.10 5 161 2.2E-50 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 PRINTS PR01576 Peptide deformylase signature 98 116 1.2E-25 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-25 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 PRINTS PR01576 Peptide deformylase signature 117 146 1.2E-25 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 PRINTS PR01576 Peptide deformylase signature 86 97 1.2E-25 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 Hamap MF_00163 Peptide deformylase [def]. 2 159 25.064 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 PANTHER PTHR10458 2 161 2.0E-50 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 SUPERFAMILY SSF56420 2 160 5.5E-49 T 22-04-2016 IPR023635 Peptide deformylase HMPREF9228_RS03720 80332534a1ea108f9c3e33ed3fcec239 161 PIRSF PIRSF004749 1 161 9.1E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 ProSitePatterns PS01071 grpE protein signature. 179 222 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 PANTHER PTHR21237 88 227 1.3E-33 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 SUPERFAMILY SSF58014 85 168 7.85E-15 T 22-04-2016 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 Gene3D G3DSA:2.30.22.10 168 226 1.7E-21 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 Gene3D G3DSA:3.90.20.20 80 162 1.1E-15 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 SUPERFAMILY SSF51064 169 225 1.01E-15 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 PRINTS PR00773 GrpE protein signature 203 222 4.3E-21 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 PRINTS PR00773 GrpE protein signature 176 191 4.3E-21 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 PRINTS PR00773 GrpE protein signature 101 117 4.3E-21 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 PRINTS PR00773 GrpE protein signature 129 144 4.3E-21 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 Hamap MF_01151 Protein GrpE [grpE]. 17 224 16.147 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 HMPREF9228_RS00600 064defc344cd02b7595d2ac9f5873da1 227 Pfam PF01025 GrpE 78 223 4.1E-35 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 HMPREF9228_RS00230 1aeb4502a1f4f47ed8a7b117a16d6856 559 Pfam PF00474 Sodium:solute symporter family 49 473 1.6E-76 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS00230 1aeb4502a1f4f47ed8a7b117a16d6856 559 PANTHER PTHR11819:SF148 17 530 7.1E-125 T 22-04-2016 HMPREF9228_RS00230 1aeb4502a1f4f47ed8a7b117a16d6856 559 PANTHER PTHR11819 17 530 7.1E-125 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS00230 1aeb4502a1f4f47ed8a7b117a16d6856 559 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 49 473 6.3E-74 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS00550 5142c6f819c623c76d3a9ed11eb5446a 319 PANTHER PTHR33393:SF5 129 264 1.5E-22 T 22-04-2016 HMPREF9228_RS00550 5142c6f819c623c76d3a9ed11eb5446a 319 PANTHER PTHR33393 129 264 1.5E-22 T 22-04-2016 HMPREF9228_RS00550 5142c6f819c623c76d3a9ed11eb5446a 319 SUPERFAMILY SSF63817 125 258 2.09E-44 T 22-04-2016 IPR023365 Sortase domain HMPREF9228_RS00550 5142c6f819c623c76d3a9ed11eb5446a 319 TIGRFAM TIGR01076 sortase_fam: sortase 131 259 1.4E-49 T 22-04-2016 IPR005754 Sortase family HMPREF9228_RS00550 5142c6f819c623c76d3a9ed11eb5446a 319 Pfam PF04203 Sortase family 133 256 1.9E-24 T 22-04-2016 IPR005754 Sortase family HMPREF9228_RS00550 5142c6f819c623c76d3a9ed11eb5446a 319 Gene3D G3DSA:2.40.260.10 122 260 3.3E-50 T 22-04-2016 IPR023365 Sortase domain HMPREF9228_RS06655 30c56a7d5cc2a36d65e66c55cca2a5ab 327 SUPERFAMILY SSF161098 63 270 7.85E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06655 30c56a7d5cc2a36d65e66c55cca2a5ab 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 281 4.4E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06655 30c56a7d5cc2a36d65e66c55cca2a5ab 327 PANTHER PTHR30450 47 291 2.6E-83 T 22-04-2016 HMPREF9228_RS06655 30c56a7d5cc2a36d65e66c55cca2a5ab 327 Gene3D G3DSA:1.10.3720.10 63 284 4.6E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06655 30c56a7d5cc2a36d65e66c55cca2a5ab 327 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 63 178 4.2E-13 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 HMPREF9228_RS06655 30c56a7d5cc2a36d65e66c55cca2a5ab 327 PANTHER PTHR30450:SF2 47 291 2.6E-83 T 22-04-2016 HMPREF9228_RS00175 648f4130071a018c54fbc1cb9a83bc45 549 Gene3D G3DSA:1.10.10.10 488 549 2.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00175 648f4130071a018c54fbc1cb9a83bc45 549 PANTHER PTHR30595:SF3 24 471 3.4E-17 T 22-04-2016 HMPREF9228_RS00175 648f4130071a018c54fbc1cb9a83bc45 549 Gene3D G3DSA:1.10.10.10 411 454 1.9E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00175 648f4130071a018c54fbc1cb9a83bc45 549 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 299 376 1.1E-12 T 22-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain HMPREF9228_RS00175 648f4130071a018c54fbc1cb9a83bc45 549 PANTHER PTHR30595 24 471 3.4E-17 T 22-04-2016 HMPREF9228_RS00175 648f4130071a018c54fbc1cb9a83bc45 549 SUPERFAMILY SSF46785 485 547 8.9E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00175 648f4130071a018c54fbc1cb9a83bc45 549 SUPERFAMILY SSF46785 409 463 3.71E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00175 648f4130071a018c54fbc1cb9a83bc45 549 Pfam PF04326 Putative DNA-binding domain 6 112 4.4E-14 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 PANTHER PTHR11587:SF2 1 403 2.7E-184 T 22-04-2016 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 SUPERFAMILY SSF52402 2 173 1.5E-41 T 22-04-2016 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 Gene3D G3DSA:3.90.1260.10 176 398 2.6E-81 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 Pfam PF00764 Arginosuccinate synthase 8 393 1.5E-170 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 SUPERFAMILY SSF69864 173 398 1.57E-83 T 22-04-2016 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 398 50.387 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 393 1.4E-139 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 PANTHER PTHR11587 1 403 2.7E-184 T 22-04-2016 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05690 c7501bdd39b4655e862875ca1391041b 412 Gene3D G3DSA:3.40.50.620 6 175 9.6E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS00340 24cc2ecdb3c14d5a092a2226971eb971 233 Gene3D G3DSA:2.60.200.20 144 225 6.2E-27 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS00340 24cc2ecdb3c14d5a092a2226971eb971 233 Pfam PF12401 Protein of unknown function (DUF2662) 4 117 9.6E-36 T 22-04-2016 IPR022128 Protein of unknown function DUF3662 HMPREF9228_RS00340 24cc2ecdb3c14d5a092a2226971eb971 233 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 145 224 3.7E-19 T 22-04-2016 IPR032030 YscD, cytoplasmic domain HMPREF9228_RS00340 24cc2ecdb3c14d5a092a2226971eb971 233 PANTHER PTHR15715 150 219 2.1E-13 T 22-04-2016 HMPREF9228_RS00340 24cc2ecdb3c14d5a092a2226971eb971 233 SMART SM00240 155 205 1.2E-15 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS00340 24cc2ecdb3c14d5a092a2226971eb971 233 SUPERFAMILY SSF49879 143 226 1.4E-26 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 HMPREF9228_RS01885 c8c5424525f1258b955c05d1f62cde8d 97 SUPERFAMILY SSF47413 4 68 5.88E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS01885 c8c5424525f1258b955c05d1f62cde8d 97 SMART SM00530 18 72 2.1E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS01885 c8c5424525f1258b955c05d1f62cde8d 97 Gene3D G3DSA:1.10.260.40 11 68 2.0E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS01885 c8c5424525f1258b955c05d1f62cde8d 97 Pfam PF01381 Helix-turn-helix 22 66 7.1E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 Pfam PF00248 Aldo/keto reductase family 31 273 2.1E-45 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 Gene3D G3DSA:3.20.20.100 15 285 1.0E-92 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 136 153 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 PANTHER PTHR11732 11 286 1.0E-116 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 242 257 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 48 65 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 PRINTS PR00069 Aldo-keto reductase signature 136 153 5.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 PRINTS PR00069 Aldo-keto reductase signature 44 68 5.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 PRINTS PR00069 Aldo-keto reductase signature 209 233 5.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 PRINTS PR00069 Aldo-keto reductase signature 170 199 5.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 PRINTS PR00069 Aldo-keto reductase signature 104 122 5.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02120 593ec1a687e08fcfbb3ddbf654b4bd5a 289 SUPERFAMILY SSF51430 15 280 9.82E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 Gene3D G3DSA:3.90.780.10 347 566 1.8E-20 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 PANTHER PTHR11575 300 568 2.3E-33 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 PANTHER PTHR11575 39 276 2.3E-33 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 Gene3D G3DSA:3.60.21.10 34 287 6.7E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 SUPERFAMILY SSF55816 344 565 2.09E-19 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 SUPERFAMILY SSF56300 34 288 5.35E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 PANTHER PTHR11575:SF7 300 568 2.3E-33 T 22-04-2016 HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 PANTHER PTHR11575:SF7 39 276 2.3E-33 T 22-04-2016 HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 ProSitePatterns PS00018 EF-hand calcium-binding domain. 407 419 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 Pfam PF02872 5'-nucleotidase, C-terminal domain 347 536 2.8E-13 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 HMPREF9228_RS02505 b288b8b6783cf845227e0210391b1dfa 573 Pfam PF00149 Calcineurin-like phosphoesterase 41 242 1.3E-4 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Pfam PF13361 UvrD-like helicase C-terminal domain 438 891 4.9E-28 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1099 1293 1.2E-10 T 22-04-2016 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Gene3D G3DSA:1.10.486.10 509 575 2.5E-18 T 22-04-2016 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Gene3D G3DSA:1.10.486.10 610 650 2.5E-18 T 22-04-2016 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 SUPERFAMILY SSF52540 8 149 2.28E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 SUPERFAMILY SSF52540 258 545 2.28E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 SUPERFAMILY SSF52540 598 756 2.28E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 SUPERFAMILY SSF52540 867 893 2.28E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Gene3D G3DSA:3.40.50.300 863 916 7.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Gene3D G3DSA:3.40.50.300 384 508 7.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Gene3D G3DSA:3.40.50.300 722 757 7.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Gene3D G3DSA:3.40.50.300 268 371 6.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Gene3D G3DSA:3.40.50.300 104 166 6.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Gene3D G3DSA:3.40.50.300 8 70 6.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 370 1.7E-51 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 PANTHER PTHR11070 866 892 1.0E-94 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 PANTHER PTHR11070 9 194 1.0E-94 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 PANTHER PTHR11070 233 628 1.0E-94 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 HMPREF9228_RS06735 36c118bba26824e8cfe126e668a0354c 1311 PANTHER PTHR11070 698 766 1.0E-94 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 HMPREF9228_RS05295 b55ffb488b244542010fbf34701d46b0 306 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 225 2.1E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 HMPREF9228_RS05295 b55ffb488b244542010fbf34701d46b0 306 SUPERFAMILY SSF102705 1 225 2.22E-66 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 HMPREF9228_RS05295 b55ffb488b244542010fbf34701d46b0 306 PANTHER PTHR13799 1 225 6.7E-50 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 HMPREF9228_RS05295 b55ffb488b244542010fbf34701d46b0 306 Gene3D G3DSA:3.40.1390.30 2 114 6.8E-37 T 22-04-2016 HMPREF9228_RS05295 b55ffb488b244542010fbf34701d46b0 306 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 224 2.1E-39 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 HMPREF9228_RS05295 b55ffb488b244542010fbf34701d46b0 306 Gene3D G3DSA:3.40.1390.30 115 225 1.7E-29 T 22-04-2016 HMPREF9228_RS05590 cf4f1f550d5a71627367b3ed5278ef05 139 Gene3D G3DSA:3.40.50.720 4 66 9.0E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS05590 cf4f1f550d5a71627367b3ed5278ef05 139 SUPERFAMILY SSF116726 54 137 9.16E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 HMPREF9228_RS05590 cf4f1f550d5a71627367b3ed5278ef05 139 Pfam PF02080 TrkA-C domain 75 136 8.4E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 HMPREF9228_RS05590 cf4f1f550d5a71627367b3ed5278ef05 139 Gene3D G3DSA:3.30.70.1450 75 136 3.7E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 HMPREF9228_RS08520 4193f492a49ef86743bb91913e8224fb 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 257 6.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08520 4193f492a49ef86743bb91913e8224fb 273 PANTHER PTHR32243:SF31 1 273 5.0E-102 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 HMPREF9228_RS08520 4193f492a49ef86743bb91913e8224fb 273 PANTHER PTHR32243 1 273 5.0E-102 T 22-04-2016 HMPREF9228_RS08520 4193f492a49ef86743bb91913e8224fb 273 SUPERFAMILY SSF161098 6 268 6.64E-71 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08520 4193f492a49ef86743bb91913e8224fb 273 Gene3D G3DSA:1.10.3720.10 5 262 6.1E-66 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06330 ae246678cd823ab76f4e6704736868c1 307 Gene3D G3DSA:3.40.50.1980 202 305 8.7E-7 T 22-04-2016 HMPREF9228_RS06330 ae246678cd823ab76f4e6704736868c1 307 PANTHER PTHR30477:SF1 36 280 1.7E-29 T 22-04-2016 HMPREF9228_RS06330 ae246678cd823ab76f4e6704736868c1 307 Pfam PF01297 Zinc-uptake complex component A periplasmic 49 304 6.8E-39 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 HMPREF9228_RS06330 ae246678cd823ab76f4e6704736868c1 307 PANTHER PTHR30477 36 280 1.7E-29 T 22-04-2016 HMPREF9228_RS06330 ae246678cd823ab76f4e6704736868c1 307 SUPERFAMILY SSF53807 42 306 1.67E-52 T 22-04-2016 HMPREF9228_RS06330 ae246678cd823ab76f4e6704736868c1 307 Gene3D G3DSA:3.40.50.1980 46 188 1.8E-31 T 22-04-2016 HMPREF9228_RS05825 e01209acbfb901864d7c0348f7359443 262 PANTHER PTHR10291 32 262 4.8E-100 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 HMPREF9228_RS05825 e01209acbfb901864d7c0348f7359443 262 Pfam PF01255 Putative undecaprenyl diphosphate synthase 39 259 5.2E-68 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 HMPREF9228_RS05825 e01209acbfb901864d7c0348f7359443 262 SUPERFAMILY SSF64005 30 254 2.22E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 HMPREF9228_RS05825 e01209acbfb901864d7c0348f7359443 262 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 205 222 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 HMPREF9228_RS05825 e01209acbfb901864d7c0348f7359443 262 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 32 259 6.5E-69 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 HMPREF9228_RS05825 e01209acbfb901864d7c0348f7359443 262 Gene3D G3DSA:3.40.1180.10 28 261 2.4E-84 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 HMPREF9228_RS05825 e01209acbfb901864d7c0348f7359443 262 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 32 260 35.876 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 HMPREF9228_RS08075 10f9fab6fc15a16426107729043ca506 132 PIRSF PIRSF002131 2 132 8.2E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08075 10f9fab6fc15a16426107729043ca506 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 129 1.7E-54 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08075 10f9fab6fc15a16426107729043ca506 132 Pfam PF00411 Ribosomal protein S11 22 131 2.4E-45 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08075 10f9fab6fc15a16426107729043ca506 132 SUPERFAMILY SSF53137 17 132 6.1E-46 T 22-04-2016 HMPREF9228_RS08075 10f9fab6fc15a16426107729043ca506 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 132 32.005 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08075 10f9fab6fc15a16426107729043ca506 132 ProSitePatterns PS00054 Ribosomal protein S11 signature. 100 122 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site HMPREF9228_RS08075 10f9fab6fc15a16426107729043ca506 132 Gene3D G3DSA:3.30.420.80 12 132 1.8E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08075 10f9fab6fc15a16426107729043ca506 132 PANTHER PTHR11759 13 132 6.8E-62 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08205 d809ba212f31216173481182ecd8eaea 257 Gene3D G3DSA:3.30.1330.80 17 117 3.4E-33 T 22-04-2016 HMPREF9228_RS08205 d809ba212f31216173481182ecd8eaea 257 PANTHER PTHR35524 4 250 3.2E-61 T 22-04-2016 HMPREF9228_RS08205 d809ba212f31216173481182ecd8eaea 257 Gene3D G3DSA:3.30.1330.80 118 214 3.8E-39 T 22-04-2016 HMPREF9228_RS08205 d809ba212f31216173481182ecd8eaea 257 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 18 249 7.1E-64 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 HMPREF9228_RS08205 d809ba212f31216173481182ecd8eaea 257 PIRSF PIRSF001332 3 250 3.9E-73 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 HMPREF9228_RS08205 d809ba212f31216173481182ecd8eaea 257 Pfam PF03306 Alpha-acetolactate decarboxylase 20 237 6.3E-68 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 HMPREF9228_RS08205 d809ba212f31216173481182ecd8eaea 257 SUPERFAMILY SSF117856 18 249 2.41E-71 T 22-04-2016 HMPREF9228_RS05400 3a4a0a2a5e1763af50babc836f2d0e93 120 SUPERFAMILY SSF55486 8 116 6.59E-26 T 22-04-2016 HMPREF9228_RS05400 3a4a0a2a5e1763af50babc836f2d0e93 120 Pfam PF06262 Zinicin-like metallopeptidase 57 115 4.5E-5 T 22-04-2016 IPR010428 Zinicin-like metallopeptidase HMPREF9228_RS01805 b52e11d43d8240d68283b65e6508adc8 89 SUPERFAMILY SSF47060 3 89 6.77E-36 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 HMPREF9228_RS01805 b52e11d43d8240d68283b65e6508adc8 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.33 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS01805 b52e11d43d8240d68283b65e6508adc8 89 Pfam PF00312 Ribosomal protein S15 8 88 2.1E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS01805 b52e11d43d8240d68283b65e6508adc8 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.3E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS01805 b52e11d43d8240d68283b65e6508adc8 89 PANTHER PTHR23321 2 89 1.5E-40 T 22-04-2016 HMPREF9228_RS01805 b52e11d43d8240d68283b65e6508adc8 89 Gene3D G3DSA:1.10.287.10 3 89 2.0E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 HMPREF9228_RS01805 b52e11d43d8240d68283b65e6508adc8 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-37 T 22-04-2016 HMPREF9228_RS01805 b52e11d43d8240d68283b65e6508adc8 89 SMART SM01387 8 88 5.5E-53 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS09255 a1d4d2f855912050162a8d3f1b6210c2 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 325 4.3E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09255 a1d4d2f855912050162a8d3f1b6210c2 327 Gene3D G3DSA:1.10.3720.10 91 322 1.9E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09255 a1d4d2f855912050162a8d3f1b6210c2 327 PANTHER PTHR30465:SF24 1 326 1.2E-67 T 22-04-2016 HMPREF9228_RS09255 a1d4d2f855912050162a8d3f1b6210c2 327 PANTHER PTHR30465 1 326 1.2E-67 T 22-04-2016 HMPREF9228_RS09255 a1d4d2f855912050162a8d3f1b6210c2 327 SUPERFAMILY SSF161098 189 307 2.75E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09255 a1d4d2f855912050162a8d3f1b6210c2 327 SUPERFAMILY SSF161098 94 162 2.75E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09185 71b546bbb08fb0d44be7994369657163 326 PANTHER PTHR22925 30 326 1.2E-45 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 HMPREF9228_RS09185 71b546bbb08fb0d44be7994369657163 326 Gene3D G3DSA:2.115.10.20 27 311 5.1E-61 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain HMPREF9228_RS09185 71b546bbb08fb0d44be7994369657163 326 Pfam PF04616 Glycosyl hydrolases family 43 33 308 1.3E-42 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 HMPREF9228_RS09185 71b546bbb08fb0d44be7994369657163 326 SUPERFAMILY SSF75005 33 320 2.86E-58 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain HMPREF9228_RS08965 1d8994cf1485a731248ef8cbe84bc925 159 PANTHER PTHR33603:SF1 1 159 2.0E-61 T 22-04-2016 HMPREF9228_RS08965 1d8994cf1485a731248ef8cbe84bc925 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 1.4E-49 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 HMPREF9228_RS08965 1d8994cf1485a731248ef8cbe84bc925 159 PANTHER PTHR33603 1 159 2.0E-61 T 22-04-2016 HMPREF9228_RS08965 1d8994cf1485a731248ef8cbe84bc925 159 PIRSF PIRSF004505 1 159 6.5E-54 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 HMPREF9228_RS08965 1d8994cf1485a731248ef8cbe84bc925 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 3.3E-58 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 HMPREF9228_RS08965 1d8994cf1485a731248ef8cbe84bc925 159 SUPERFAMILY SSF75217 1 157 2.62E-58 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS08965 1d8994cf1485a731248ef8cbe84bc925 159 Gene3D G3DSA:3.40.1280.10 1 159 2.8E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS08965 1d8994cf1485a731248ef8cbe84bc925 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.149 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 PIRSF PIRSF002134 1 125 9.2E-45 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 SUPERFAMILY SSF46946 2 122 8.77E-47 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.318 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 Gene3D G3DSA:4.10.910.10 73 124 3.5E-25 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.6E-51 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 Gene3D G3DSA:1.10.8.50 1 72 3.6E-32 T 22-04-2016 HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 PANTHER PTHR10871 1 123 6.0E-70 T 22-04-2016 HMPREF9228_RS08080 225d36b8862a834fb173f476a62be9ac 125 Pfam PF00416 Ribosomal protein S13/S18 3 109 4.9E-32 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS06940 69b6b68478e07ce6a3cf201fc83fe301 400 Gene3D G3DSA:1.10.443.10 215 381 2.5E-30 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS06940 69b6b68478e07ce6a3cf201fc83fe301 400 Gene3D G3DSA:1.10.150.130 114 197 3.8E-10 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal HMPREF9228_RS06940 69b6b68478e07ce6a3cf201fc83fe301 400 PANTHER PTHR30349 48 381 2.3E-32 T 22-04-2016 HMPREF9228_RS06940 69b6b68478e07ce6a3cf201fc83fe301 400 Pfam PF00589 Phage integrase family 215 381 5.9E-21 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS06940 69b6b68478e07ce6a3cf201fc83fe301 400 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 115 192 2.6E-6 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 HMPREF9228_RS06940 69b6b68478e07ce6a3cf201fc83fe301 400 SUPERFAMILY SSF56349 111 380 7.06E-38 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS00525 33a578f2efc3320ded574dd19173197f 342 SUPERFAMILY SSF46785 138 217 2.05E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00525 33a578f2efc3320ded574dd19173197f 342 Gene3D G3DSA:1.10.10.10 138 194 1.8E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00225 120a20897f75f2d4b5e41aab1b5f272f 630 Pfam PF06738 Putative threonine/serine exporter 23 101 2.2E-11 T 22-04-2016 IPR010619 Putative threonine/serine exporter HMPREF9228_RS00225 120a20897f75f2d4b5e41aab1b5f272f 630 Pfam PF06738 Putative threonine/serine exporter 300 463 4.7E-40 T 22-04-2016 IPR010619 Putative threonine/serine exporter HMPREF9228_RS00225 120a20897f75f2d4b5e41aab1b5f272f 630 Pfam PF12821 Threonine/Serine exporter, ThrE 485 620 2.5E-18 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE HMPREF9228_RS00225 120a20897f75f2d4b5e41aab1b5f272f 630 PANTHER PTHR31082 304 630 3.2E-15 T 22-04-2016 HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 Pfam PF08532 Beta-galactosidase trimerisation domain 411 625 7.1E-63 T 22-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 PIRSF PIRSF001084 13 709 5.8E-213 T 22-04-2016 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 PANTHER PTHR36447:SF1 1 709 1.1E-185 T 22-04-2016 HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 SUPERFAMILY SSF51445 21 379 5.62E-103 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 Gene3D G3DSA:3.20.20.80 22 400 1.6E-120 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 Pfam PF08533 Beta-galactosidase C-terminal domain 650 707 3.0E-8 T 22-04-2016 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 Gene3D G3DSA:3.40.50.880 410 622 3.5E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 PANTHER PTHR36447 1 709 1.1E-185 T 22-04-2016 HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 SUPERFAMILY SSF52317 409 622 2.44E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS02105 4bfdb99e27d78adc047ebee9f5377f49 710 Pfam PF02449 Beta-galactosidase 25 397 2.1E-145 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 HMPREF9228_RS06140 d6ad59661d6562e95017d528373a485e 459 Pfam PF13635 Domain of unknown function (DUF4143) 227 386 3.6E-19 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 HMPREF9228_RS06140 d6ad59661d6562e95017d528373a485e 459 SUPERFAMILY SSF52540 6 215 2.53E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06140 d6ad59661d6562e95017d528373a485e 459 Gene3D G3DSA:3.40.50.300 9 123 4.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06140 d6ad59661d6562e95017d528373a485e 459 Pfam PF13173 AAA domain 19 152 1.6E-26 T 22-04-2016 HMPREF9228_RS06140 d6ad59661d6562e95017d528373a485e 459 PANTHER PTHR33295 1 384 9.6E-42 T 22-04-2016 HMPREF9228_RS06140 d6ad59661d6562e95017d528373a485e 459 PANTHER PTHR33295:SF7 1 384 9.6E-42 T 22-04-2016 HMPREF9228_RS04875 b7ef81a1bd13baabd78d3ef6bf2f17a8 270 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 234 4.1E-19 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 HMPREF9228_RS04875 b7ef81a1bd13baabd78d3ef6bf2f17a8 270 SUPERFAMILY SSF100950 3 260 2.19E-84 T 22-04-2016 HMPREF9228_RS04875 b7ef81a1bd13baabd78d3ef6bf2f17a8 270 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 129 147 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS04875 b7ef81a1bd13baabd78d3ef6bf2f17a8 270 PANTHER PTHR11280 4 254 2.2E-103 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS04875 b7ef81a1bd13baabd78d3ef6bf2f17a8 270 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 2 251 38.666 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS04875 b7ef81a1bd13baabd78d3ef6bf2f17a8 270 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 4 255 3.5E-72 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS04875 b7ef81a1bd13baabd78d3ef6bf2f17a8 270 Gene3D G3DSA:3.40.50.1360 3 264 1.7E-87 T 22-04-2016 HMPREF9228_RS05425 d1fb0d9e9938a294379a5e86736fb06d 301 PANTHER PTHR33392:SF6 37 284 1.5E-46 T 22-04-2016 HMPREF9228_RS05425 d1fb0d9e9938a294379a5e86736fb06d 301 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 60 202 2.2E-36 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain HMPREF9228_RS05425 d1fb0d9e9938a294379a5e86736fb06d 301 PANTHER PTHR33392 37 284 1.5E-46 T 22-04-2016 HMPREF9228_RS05425 d1fb0d9e9938a294379a5e86736fb06d 301 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 60 202 1.3E-34 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain HMPREF9228_RS03445 c7e716bb9fe065e944e4ce4eaac04702 357 Pfam PF11268 Protein of unknown function (DUF3071) 9 173 6.7E-33 T 22-04-2016 IPR021421 Protein of unknown function DUF3071 HMPREF9228_RS00845 f3b6d96b8f9a6a2b87af9388042500a2 301 PANTHER PTHR30465:SF0 1 300 5.5E-89 T 22-04-2016 HMPREF9228_RS00845 f3b6d96b8f9a6a2b87af9388042500a2 301 SUPERFAMILY SSF161098 75 284 2.62E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00845 f3b6d96b8f9a6a2b87af9388042500a2 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 299 6.1E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00845 f3b6d96b8f9a6a2b87af9388042500a2 301 Gene3D G3DSA:1.10.3720.10 74 297 1.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00845 f3b6d96b8f9a6a2b87af9388042500a2 301 PANTHER PTHR30465 1 300 5.5E-89 T 22-04-2016 HMPREF9228_RS00620 024486b4539eda385546a6d60049b089 258 Pfam PF05893 Acyl-CoA reductase (LuxC) 1 238 1.1E-81 T 22-04-2016 IPR008670 Acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723|UniPathway: UPA00569 HMPREF9228_RS02405 5603dd83e3b456fedda7b2c9a8d5aad2 345 Pfam PF13519 von Willebrand factor type A domain 82 201 1.5E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02405 5603dd83e3b456fedda7b2c9a8d5aad2 345 Gene3D G3DSA:3.40.50.410 79 228 2.6E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02405 5603dd83e3b456fedda7b2c9a8d5aad2 345 Gene3D G3DSA:3.40.50.410 266 295 2.6E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02405 5603dd83e3b456fedda7b2c9a8d5aad2 345 SUPERFAMILY SSF53300 266 296 5.88E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS02405 5603dd83e3b456fedda7b2c9a8d5aad2 345 SUPERFAMILY SSF53300 80 228 5.88E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A HMPREF9228_RS03050 2257b12d408db159d55aa3e79dff99ef 253 SUPERFAMILY SSF88946 13 100 4.51E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03050 2257b12d408db159d55aa3e79dff99ef 253 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 184 1.7E-28 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03050 2257b12d408db159d55aa3e79dff99ef 253 Pfam PF08281 Sigma-70, region 4 128 180 8.3E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03050 2257b12d408db159d55aa3e79dff99ef 253 Gene3D G3DSA:1.10.1740.10 10 88 1.3E-22 T 22-04-2016 HMPREF9228_RS03050 2257b12d408db159d55aa3e79dff99ef 253 Pfam PF04542 Sigma-70 region 2 25 86 6.2E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS03050 2257b12d408db159d55aa3e79dff99ef 253 Gene3D G3DSA:1.10.10.10 128 186 2.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03050 2257b12d408db159d55aa3e79dff99ef 253 PANTHER PTHR30173 13 188 4.6E-34 T 22-04-2016 HMPREF9228_RS03050 2257b12d408db159d55aa3e79dff99ef 253 SUPERFAMILY SSF88659 99 188 2.01E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 HMPREF9228_RS04805 910300946add952359c89cac65149532 327 SMART SM00382 44 235 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS04805 910300946add952359c89cac65149532 327 Pfam PF00005 ABC transporter 36 178 6.4E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04805 910300946add952359c89cac65149532 327 Pfam PF13732 Domain of unknown function (DUF4162) 232 321 8.5E-11 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 HMPREF9228_RS04805 910300946add952359c89cac65149532 327 Gene3D G3DSA:3.40.50.300 14 239 6.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04805 910300946add952359c89cac65149532 327 SUPERFAMILY SSF52540 20 239 1.92E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04805 910300946add952359c89cac65149532 327 PANTHER PTHR24220 21 239 4.4E-85 T 22-04-2016 HMPREF9228_RS06105 0d2ad5d991e80fae69811808bb7eac65 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 326 1.4E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06105 0d2ad5d991e80fae69811808bb7eac65 329 Gene3D G3DSA:1.10.3720.10 97 321 1.2E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06105 0d2ad5d991e80fae69811808bb7eac65 329 SUPERFAMILY SSF161098 97 309 4.14E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06105 0d2ad5d991e80fae69811808bb7eac65 329 PANTHER PTHR30465 2 327 2.5E-115 T 22-04-2016 HMPREF9228_RS06105 0d2ad5d991e80fae69811808bb7eac65 329 PANTHER PTHR30465:SF55 2 327 2.5E-115 T 22-04-2016 HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 SUPERFAMILY SSF50715 4 183 7.98E-44 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 94 7.0E-41 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 Pfam PF01386 Ribosomal L25p family 7 91 2.9E-21 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 Gene3D G3DSA:2.170.120.20 96 183 2.3E-18 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 176 1.5E-38 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 179 2.4E-16 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 Gene3D G3DSA:2.40.240.10 5 94 9.9E-27 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 PANTHER PTHR33284 5 205 1.1E-40 T 22-04-2016 HMPREF9228_RS04505 099db91a02b3b18545de6acf806d3c18 209 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 179 24.181 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 HMPREF9228_RS03285 18c3049a5a86139cde5e75fca423d5fb 212 SUPERFAMILY SSF55729 119 191 5.32E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS03285 18c3049a5a86139cde5e75fca423d5fb 212 SUPERFAMILY SSF55729 1 80 5.32E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS03285 18c3049a5a86139cde5e75fca423d5fb 212 Pfam PF00583 Acetyltransferase (GNAT) family 102 181 8.7E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS03285 18c3049a5a86139cde5e75fca423d5fb 212 Gene3D G3DSA:3.40.630.30 2 70 2.4E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS03285 18c3049a5a86139cde5e75fca423d5fb 212 Gene3D G3DSA:3.40.630.30 122 189 2.4E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS07270 2c44685bb33293b25b89b040f73eb710 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 18 140 2.0E-19 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 HMPREF9228_RS07270 2c44685bb33293b25b89b040f73eb710 351 PANTHER PTHR22604:SF105 12 340 7.8E-82 T 22-04-2016 HMPREF9228_RS07270 2c44685bb33293b25b89b040f73eb710 351 SUPERFAMILY SSF55347 149 315 6.05E-33 T 22-04-2016 HMPREF9228_RS07270 2c44685bb33293b25b89b040f73eb710 351 SUPERFAMILY SSF51735 14 176 6.15E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS07270 2c44685bb33293b25b89b040f73eb710 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 157 253 7.8E-4 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 HMPREF9228_RS07270 2c44685bb33293b25b89b040f73eb710 351 Gene3D G3DSA:3.40.50.720 13 166 3.2E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS07270 2c44685bb33293b25b89b040f73eb710 351 Gene3D G3DSA:3.30.360.10 167 351 8.0E-50 T 22-04-2016 HMPREF9228_RS07270 2c44685bb33293b25b89b040f73eb710 351 PANTHER PTHR22604 12 340 7.8E-82 T 22-04-2016 HMPREF9228_RS04635 d2e9e74a109e77976b4533a6ec463e22 395 PANTHER PTHR30518:SF2 38 395 6.5E-55 T 22-04-2016 HMPREF9228_RS04635 d2e9e74a109e77976b4533a6ec463e22 395 Gene3D G3DSA:3.30.160.60 358 392 8.8E-6 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 HMPREF9228_RS04635 d2e9e74a109e77976b4533a6ec463e22 395 Pfam PF02618 YceG-like family 102 384 1.0E-63 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like HMPREF9228_RS04635 d2e9e74a109e77976b4533a6ec463e22 395 PANTHER PTHR30518 38 395 6.5E-55 T 22-04-2016 HMPREF9228_RS04635 d2e9e74a109e77976b4533a6ec463e22 395 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 53 385 7.0E-42 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like HMPREF9228_RS03040 6b7bfc3bc84facda345c9f81eaa465a3 335 Gene3D G3DSA:3.40.630.30 132 300 8.7E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS03040 6b7bfc3bc84facda345c9f81eaa465a3 335 Pfam PF13480 Acetyltransferase (GNAT) domain 151 281 4.1E-10 T 22-04-2016 HMPREF9228_RS03040 6b7bfc3bc84facda345c9f81eaa465a3 335 SUPERFAMILY SSF55729 26 113 2.96E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS03040 6b7bfc3bc84facda345c9f81eaa465a3 335 SUPERFAMILY SSF55729 142 318 8.48E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS05415 0fbc4ee2bdac6786a2ff9de32ca9146e 99 PANTHER PTHR38839 1 93 8.7E-40 T 22-04-2016 HMPREF9228_RS05415 0fbc4ee2bdac6786a2ff9de32ca9146e 99 PANTHER PTHR38839:SF4 1 93 8.7E-40 T 22-04-2016 HMPREF9228_RS05415 0fbc4ee2bdac6786a2ff9de32ca9146e 99 Pfam PF02467 Transcription factor WhiB 28 90 2.4E-26 T 22-04-2016 IPR003482 Transcription factor WhiB HMPREF9228_RS05415 0fbc4ee2bdac6786a2ff9de32ca9146e 99 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 22 98 14.635 T 22-04-2016 IPR003482 Transcription factor WhiB HMPREF9228_RS02295 fc1fe2ebfe40d95cb5b8fb8bf82635a7 234 PANTHER PTHR12725:SF63 14 234 1.2E-17 T 22-04-2016 HMPREF9228_RS02295 fc1fe2ebfe40d95cb5b8fb8bf82635a7 234 Gene3D G3DSA:3.40.50.1000 29 217 8.5E-30 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS02295 fc1fe2ebfe40d95cb5b8fb8bf82635a7 234 PANTHER PTHR12725 14 234 1.2E-17 T 22-04-2016 HMPREF9228_RS02295 fc1fe2ebfe40d95cb5b8fb8bf82635a7 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 147 211 9.0E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 HMPREF9228_RS02295 fc1fe2ebfe40d95cb5b8fb8bf82635a7 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 79 209 4.4E-11 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS02295 fc1fe2ebfe40d95cb5b8fb8bf82635a7 234 SUPERFAMILY SSF56784 32 221 5.06E-30 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS02870 ffac457e0702cc87ffd1a4f0e54b0075 218 PANTHER PTHR18895 14 196 8.1E-30 T 22-04-2016 HMPREF9228_RS02870 ffac457e0702cc87ffd1a4f0e54b0075 218 Pfam PF05175 Methyltransferase small domain 29 212 1.5E-28 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 HMPREF9228_RS02870 ffac457e0702cc87ffd1a4f0e54b0075 218 SUPERFAMILY SSF53335 22 193 8.66E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS02870 ffac457e0702cc87ffd1a4f0e54b0075 218 PANTHER PTHR18895:SF72 14 196 8.1E-30 T 22-04-2016 HMPREF9228_RS02870 ffac457e0702cc87ffd1a4f0e54b0075 218 Gene3D G3DSA:3.40.50.150 23 209 1.8E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 Gene3D G3DSA:3.60.21.10 13 100 7.6E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 Gene3D G3DSA:3.60.21.10 345 395 7.6E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 Gene3D G3DSA:3.60.21.10 139 304 7.6E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 Pfam PF00149 Calcineurin-like phosphoesterase 16 164 1.4E-6 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 SUPERFAMILY SSF56300 139 224 3.8E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 SUPERFAMILY SSF56300 341 411 3.8E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 SUPERFAMILY SSF56300 12 76 3.8E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 SUPERFAMILY SSF56300 249 300 3.8E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 PANTHER PTHR32440 249 314 3.0E-19 T 22-04-2016 HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 PANTHER PTHR32440 13 67 3.0E-19 T 22-04-2016 HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 PANTHER PTHR32440 123 212 3.0E-19 T 22-04-2016 HMPREF9228_RS00890 b6f510361c6ecdf91e949e3131bfa2ef 490 PANTHER PTHR32440 340 457 3.0E-19 T 22-04-2016 HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 Pfam PF00557 Metallopeptidase family M24 263 502 1.7E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 Gene3D G3DSA:3.90.230.10 260 526 2.3E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 SMART SM01011 61 216 1.3E-34 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 Pfam PF05195 Aminopeptidase P, N-terminal domain 70 202 3.8E-18 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 PANTHER PTHR10804 70 524 5.2E-91 T 22-04-2016 HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 PANTHER PTHR10804:SF17 70 524 5.2E-91 T 22-04-2016 HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 SUPERFAMILY SSF55920 257 526 4.06E-68 T 22-04-2016 IPR000994 Peptidase M24, structural domain HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 Gene3D G3DSA:3.40.350.10 63 259 4.5E-36 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal HMPREF9228_RS03020 f5ccc74938e5312766916e01bf92151a 531 SUPERFAMILY SSF53092 62 256 2.46E-22 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal HMPREF9228_RS04155 61f98b850626e7a7fc080edf2a6f6e79 410 Gene3D G3DSA:3.40.640.10 55 285 9.6E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS04155 61f98b850626e7a7fc080edf2a6f6e79 410 PANTHER PTHR11751:SF303 14 404 2.0E-155 T 22-04-2016 HMPREF9228_RS04155 61f98b850626e7a7fc080edf2a6f6e79 410 SUPERFAMILY SSF53383 12 404 8.38E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS04155 61f98b850626e7a7fc080edf2a6f6e79 410 PANTHER PTHR11751 14 404 2.0E-155 T 22-04-2016 HMPREF9228_RS04155 61f98b850626e7a7fc080edf2a6f6e79 410 Pfam PF00155 Aminotransferase class I and II 39 386 7.2E-50 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS04155 61f98b850626e7a7fc080edf2a6f6e79 410 Gene3D G3DSA:3.90.1150.10 286 407 6.7E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 Hamap MF_00328 Guanylate kinase [gmk]. 6 194 33.615 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 PANTHER PTHR23117 7 194 1.1E-74 T 22-04-2016 HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 8 191 9.2E-62 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 ProSitePatterns PS00856 Guanylate kinase-like signature. 42 59 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 PANTHER PTHR23117:SF13 7 194 1.1E-74 T 22-04-2016 HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 Gene3D G3DSA:3.40.50.300 5 30 2.1E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 Gene3D G3DSA:3.40.50.300 91 193 2.1E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 SUPERFAMILY SSF52540 7 193 1.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 SMART SM00072 7 194 1.1E-52 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 Pfam PF00625 Guanylate kinase 8 192 8.3E-41 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit HMPREF9228_RS05960 48f11d76e39cfc9953d515b6637c4845 196 Gene3D G3DSA:3.30.63.10 37 90 1.4E-22 T 22-04-2016 HMPREF9228_RS04985 1276dd5c7ab343af32a8ffa460df2e24 282 Gene3D G3DSA:3.40.190.10 228 263 2.0E-33 T 22-04-2016 HMPREF9228_RS04985 1276dd5c7ab343af32a8ffa460df2e24 282 Gene3D G3DSA:3.40.190.10 47 136 2.0E-33 T 22-04-2016 HMPREF9228_RS04985 1276dd5c7ab343af32a8ffa460df2e24 282 SMART SM00062 50 269 8.9E-68 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS04985 1276dd5c7ab343af32a8ffa460df2e24 282 PANTHER PTHR18966 31 263 3.8E-47 T 22-04-2016 HMPREF9228_RS04985 1276dd5c7ab343af32a8ffa460df2e24 282 Gene3D G3DSA:3.40.190.10 137 219 1.0E-21 T 22-04-2016 HMPREF9228_RS04985 1276dd5c7ab343af32a8ffa460df2e24 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 262 1.0E-50 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS04985 1276dd5c7ab343af32a8ffa460df2e24 282 PANTHER PTHR18966:SF191 31 263 3.8E-47 T 22-04-2016 HMPREF9228_RS04985 1276dd5c7ab343af32a8ffa460df2e24 282 SUPERFAMILY SSF53850 5 263 4.97E-62 T 22-04-2016 HMPREF9228_RS09470 f0f4073ef57cfa7c9b349d75a362a9c8 267 PANTHER PTHR30269:SF9 13 266 2.5E-48 T 22-04-2016 HMPREF9228_RS09470 f0f4073ef57cfa7c9b349d75a362a9c8 267 PANTHER PTHR30269 13 266 2.5E-48 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 HMPREF9228_RS09470 f0f4073ef57cfa7c9b349d75a362a9c8 267 Pfam PF01925 Sulfite exporter TauE/SafE 150 259 5.1E-16 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 HMPREF9228_RS09470 f0f4073ef57cfa7c9b349d75a362a9c8 267 Pfam PF01925 Sulfite exporter TauE/SafE 14 126 4.0E-26 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 HMPREF9228_RS07900 48532a8f8f4a2f281c2eed70763aa71e 560 PANTHER PTHR33885 29 97 1.8E-12 T 22-04-2016 HMPREF9228_RS07900 48532a8f8f4a2f281c2eed70763aa71e 560 Pfam PF04024 PspC domain 29 78 1.6E-12 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal HMPREF9228_RS01240 17d99fc9f81a82b0b5cb3243317c7d68 486 SUPERFAMILY SSF48024 44 155 2.75E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 HMPREF9228_RS01240 17d99fc9f81a82b0b5cb3243317c7d68 486 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 46 476 6.0E-153 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 HMPREF9228_RS01240 17d99fc9f81a82b0b5cb3243317c7d68 486 Gene3D G3DSA:3.40.50.300 218 477 1.3E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01240 17d99fc9f81a82b0b5cb3243317c7d68 486 SUPERFAMILY SSF52540 220 467 3.74E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01240 17d99fc9f81a82b0b5cb3243317c7d68 486 Pfam PF00772 DnaB-like helicase N terminal domain 46 146 2.4E-33 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 HMPREF9228_RS01240 17d99fc9f81a82b0b5cb3243317c7d68 486 PANTHER PTHR30153 30 485 1.6E-175 T 22-04-2016 HMPREF9228_RS01240 17d99fc9f81a82b0b5cb3243317c7d68 486 Pfam PF03796 DnaB-like helicase C terminal domain 221 475 1.5E-99 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 HMPREF9228_RS01240 17d99fc9f81a82b0b5cb3243317c7d68 486 Gene3D G3DSA:1.10.860.10 46 147 8.1E-37 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal HMPREF9228_RS01375 fd65e528bc0ee30a9e59d744caf1c571 93 PANTHER PTHR33677 1 92 2.9E-31 T 22-04-2016 HMPREF9228_RS01375 fd65e528bc0ee30a9e59d744caf1c571 93 Pfam PF02583 Metal-sensitive transcriptional repressor 7 88 1.2E-28 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 HMPREF9228_RS01375 fd65e528bc0ee30a9e59d744caf1c571 93 PANTHER PTHR33677:SF3 1 92 2.9E-31 T 22-04-2016 HMPREF9228_RS01430 ad2c630b0662d676eae42d75a3faf223 104 Pfam PF10611 Protein of unknown function (DUF2469) 1 100 3.6E-51 T 22-04-2016 IPR019592 Protein of unknown function DUF2469 HMPREF9228_RS05080 36205e4dab0dd5ccadba42e3f2b9d7e1 401 Gene3D G3DSA:3.90.1150.10 264 397 6.7E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS05080 36205e4dab0dd5ccadba42e3f2b9d7e1 401 Pfam PF00155 Aminotransferase class I and II 38 390 1.9E-30 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS05080 36205e4dab0dd5ccadba42e3f2b9d7e1 401 PANTHER PTHR11751 10 397 2.3E-112 T 22-04-2016 HMPREF9228_RS05080 36205e4dab0dd5ccadba42e3f2b9d7e1 401 Gene3D G3DSA:3.40.640.10 52 263 9.5E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS05080 36205e4dab0dd5ccadba42e3f2b9d7e1 401 PANTHER PTHR11751:SF21 10 397 2.3E-112 T 22-04-2016 HMPREF9228_RS05080 36205e4dab0dd5ccadba42e3f2b9d7e1 401 SUPERFAMILY SSF53383 9 397 1.08E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS05080 36205e4dab0dd5ccadba42e3f2b9d7e1 401 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 11 397 2.9E-117 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 HMPREF9228_RS07995 f2b65713a746f72b46bc18265b6c7cee 232 Gene3D G3DSA:3.30.70.260 146 207 9.3E-26 T 22-04-2016 HMPREF9228_RS07995 f2b65713a746f72b46bc18265b6c7cee 232 PANTHER PTHR11934 4 231 5.1E-91 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS07995 f2b65713a746f72b46bc18265b6c7cee 232 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 9 223 2.7E-83 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS07995 f2b65713a746f72b46bc18265b6c7cee 232 SUPERFAMILY SSF100950 5 153 2.54E-46 T 22-04-2016 HMPREF9228_RS07995 f2b65713a746f72b46bc18265b6c7cee 232 Gene3D G3DSA:3.40.50.1360 8 145 2.2E-59 T 22-04-2016 HMPREF9228_RS07995 f2b65713a746f72b46bc18265b6c7cee 232 SUPERFAMILY SSF75445 132 210 1.31E-22 T 22-04-2016 HMPREF9228_RS07995 f2b65713a746f72b46bc18265b6c7cee 232 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 6 227 34.509 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS07995 f2b65713a746f72b46bc18265b6c7cee 232 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 55 223 5.7E-63 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 HMPREF9228_RS04500 c5080bee3d26eaced32df4ff5251e6e2 375 Gene3D G3DSA:3.30.470.10 31 191 9.7E-69 T 22-04-2016 HMPREF9228_RS04500 c5080bee3d26eaced32df4ff5251e6e2 375 SUPERFAMILY SSF56752 19 371 4.58E-105 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 HMPREF9228_RS04500 c5080bee3d26eaced32df4ff5251e6e2 375 PANTHER PTHR11825:SF2 27 373 5.4E-126 T 22-04-2016 HMPREF9228_RS04500 c5080bee3d26eaced32df4ff5251e6e2 375 PIRSF PIRSF006468 17 375 2.7E-130 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 HMPREF9228_RS04500 c5080bee3d26eaced32df4ff5251e6e2 375 Gene3D G3DSA:3.20.10.10 192 360 1.4E-53 T 22-04-2016 HMPREF9228_RS04500 c5080bee3d26eaced32df4ff5251e6e2 375 Pfam PF01063 Amino-transferase class IV 87 330 6.5E-25 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 HMPREF9228_RS04500 c5080bee3d26eaced32df4ff5251e6e2 375 PANTHER PTHR11825 27 373 5.4E-126 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 HMPREF9228_RS04500 c5080bee3d26eaced32df4ff5251e6e2 375 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 61 374 2.6E-119 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 Gene3D G3DSA:1.10.275.10 7 144 2.2E-58 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 Pfam PF10415 Fumarase C C-terminus 416 465 6.5E-18 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 PANTHER PTHR11444:SF25 1 464 4.0E-196 T 22-04-2016 HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 Gene3D G3DSA:1.10.40.30 415 463 1.2E-18 T 22-04-2016 HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 Pfam PF00206 Lyase 16 347 7.6E-91 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 PANTHER PTHR11444 1 464 4.0E-196 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 SUPERFAMILY SSF48557 7 463 1.16E-133 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 Gene3D G3DSA:1.20.200.10 145 407 1.7E-74 T 22-04-2016 HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 PRINTS PR00149 Fumarate lyase superfamily signature 140 158 5.2E-24 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 PRINTS PR00149 Fumarate lyase superfamily signature 185 203 5.2E-24 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 5.2E-24 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS01685 603c1ababc49d8c5f7e8912798e32c0e 477 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 5.2E-24 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS05495 5e47940dc27a7bef9086c81aaa6fdd62 303 SUPERFAMILY SSF51430 11 300 1.28E-65 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS05495 5e47940dc27a7bef9086c81aaa6fdd62 303 PANTHER PTHR11732 3 300 9.6E-72 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta HMPREF9228_RS05495 5e47940dc27a7bef9086c81aaa6fdd62 303 Gene3D G3DSA:3.20.20.100 10 300 6.9E-65 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS05495 5e47940dc27a7bef9086c81aaa6fdd62 303 PRINTS PR00069 Aldo-keto reductase signature 43 67 1.6E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS05495 5e47940dc27a7bef9086c81aaa6fdd62 303 PRINTS PR00069 Aldo-keto reductase signature 158 175 1.6E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS05495 5e47940dc27a7bef9086c81aaa6fdd62 303 Pfam PF00248 Aldo/keto reductase family 16 300 7.0E-65 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS03660 40eac417fdd8f6933c4da8f3bc3f2398 364 Pfam PF00005 ABC transporter 33 172 7.5E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS03660 40eac417fdd8f6933c4da8f3bc3f2398 364 PANTHER PTHR24220:SF523 18 234 1.0E-80 T 22-04-2016 HMPREF9228_RS03660 40eac417fdd8f6933c4da8f3bc3f2398 364 SUPERFAMILY SSF52540 12 234 1.78E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03660 40eac417fdd8f6933c4da8f3bc3f2398 364 Gene3D G3DSA:3.40.50.300 8 234 4.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03660 40eac417fdd8f6933c4da8f3bc3f2398 364 SMART SM00382 41 243 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03660 40eac417fdd8f6933c4da8f3bc3f2398 364 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS03660 40eac417fdd8f6933c4da8f3bc3f2398 364 PANTHER PTHR24220 18 234 1.0E-80 T 22-04-2016 HMPREF9228_RS04520 1e295becdf2a46254e775ff6d306b7bf 101 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 7.7E-29 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 HMPREF9228_RS04520 1e295becdf2a46254e775ff6d306b7bf 101 PANTHER PTHR10160 2 90 4.6E-13 T 22-04-2016 HMPREF9228_RS04520 1e295becdf2a46254e775ff6d306b7bf 101 PANTHER PTHR10160:SF19 2 90 4.6E-13 T 22-04-2016 HMPREF9228_RS06820 b84b9dbd63ff7e8a776c0a8c4be03c3b 383 PANTHER PTHR11938 50 383 2.0E-30 T 22-04-2016 HMPREF9228_RS06820 b84b9dbd63ff7e8a776c0a8c4be03c3b 383 Gene3D G3DSA:3.20.20.70 18 382 7.1E-86 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS06820 b84b9dbd63ff7e8a776c0a8c4be03c3b 383 SUPERFAMILY SSF51395 30 381 1.74E-71 T 22-04-2016 HMPREF9228_RS06820 b84b9dbd63ff7e8a776c0a8c4be03c3b 383 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 32 381 5.2E-63 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 HMPREF9228_RS06820 b84b9dbd63ff7e8a776c0a8c4be03c3b 383 Pfam PF01180 Dihydroorotate dehydrogenase 74 366 1.6E-52 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 SMART SM00342 21 104 3.7E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 Gene3D G3DSA:1.10.10.60 58 107 7.1E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 Gene3D G3DSA:1.10.10.60 5 57 3.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 Pfam PF12833 Helix-turn-helix domain 28 105 2.7E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 SMART SM00871 132 286 2.0E-23 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.5E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.5E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 SUPERFAMILY SSF46689 57 108 2.51E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 Pfam PF14526 Integron-associated effector binding protein 136 285 1.3E-23 T 22-04-2016 IPR029441 Integron-associated effector binding protein HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 SUPERFAMILY SSF55136 134 286 8.89E-25 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 PANTHER PTHR11019 7 112 3.0E-29 T 22-04-2016 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 Gene3D G3DSA:3.20.80.10 133 286 2.3E-29 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 SUPERFAMILY SSF46689 5 55 3.09E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 PANTHER PTHR11019:SF56 7 112 3.0E-29 T 22-04-2016 HMPREF9228_RS04960 0980c8d43ff8f1ce01545e23b86565af 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 HMPREF9228_RS02370 c288b05364ad79f47e4113d0f1575a19 495 TIGRFAM TIGR03686 pupylate_PafA: Pup--protein ligase 27 483 2.1E-188 T 22-04-2016 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 UniPathway: UPA00997|UniPathway: UPA00998 HMPREF9228_RS02370 c288b05364ad79f47e4113d0f1575a19 495 PANTHER PTHR42307 21 472 2.3E-94 T 22-04-2016 HMPREF9228_RS02370 c288b05364ad79f47e4113d0f1575a19 495 Pfam PF03136 Pup-ligase protein 28 454 2.0E-133 T 22-04-2016 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 UniPathway: UPA00997|UniPathway: UPA00998 HMPREF9228_RS02370 c288b05364ad79f47e4113d0f1575a19 495 Hamap MF_02111 Pup--protein ligase [pafA]. 25 485 44.704 T 22-04-2016 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 UniPathway: UPA00997|UniPathway: UPA00998 HMPREF9228_RS02370 c288b05364ad79f47e4113d0f1575a19 495 PIRSF PIRSF018077 1 486 6.9E-167 T 22-04-2016 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 UniPathway: UPA00997|UniPathway: UPA00998 HMPREF9228_RS05015 9212a0d7aec1d3ec1ee5e50bd8768296 250 PANTHER PTHR24220:SF484 15 233 1.6E-115 T 22-04-2016 HMPREF9228_RS05015 9212a0d7aec1d3ec1ee5e50bd8768296 250 SUPERFAMILY SSF52540 14 234 2.66E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05015 9212a0d7aec1d3ec1ee5e50bd8768296 250 Gene3D G3DSA:3.40.50.300 14 235 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05015 9212a0d7aec1d3ec1ee5e50bd8768296 250 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS05015 9212a0d7aec1d3ec1ee5e50bd8768296 250 Pfam PF00005 ABC transporter 33 179 3.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS05015 9212a0d7aec1d3ec1ee5e50bd8768296 250 PANTHER PTHR24220 15 233 1.6E-115 T 22-04-2016 HMPREF9228_RS05015 9212a0d7aec1d3ec1ee5e50bd8768296 250 SMART SM00382 42 228 1.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 SUPERFAMILY SSF51445 7 391 1.62E-101 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 Gene3D G3DSA:3.20.20.80 7 390 2.7E-94 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 Pfam PF00232 Glycosyl hydrolase family 1 7 221 2.2E-40 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 Pfam PF00232 Glycosyl hydrolase family 1 270 387 1.5E-21 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 PANTHER PTHR10353:SF36 8 388 2.4E-77 T 22-04-2016 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 PANTHER PTHR10353 8 388 2.4E-77 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 PRINTS PR00131 Glycosyl hydrolase family 1 signature 337 354 3.1E-13 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 PRINTS PR00131 Glycosyl hydrolase family 1 signature 248 262 3.1E-13 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 PRINTS PR00131 Glycosyl hydrolase family 1 signature 316 327 3.1E-13 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 312 3.1E-13 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS08295 1dcaee8d53c42daedb2b119f8b05f83a 396 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 372 3.1E-13 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 HMPREF9228_RS01425 30a6798f159de52023d2d44b697b29f0 348 PANTHER PTHR13256 116 251 2.0E-22 T 22-04-2016 HMPREF9228_RS01425 30a6798f159de52023d2d44b697b29f0 348 SUPERFAMILY SSF55729 26 227 5.13E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS01425 30a6798f159de52023d2d44b697b29f0 348 Pfam PF13302 Acetyltransferase (GNAT) domain 66 201 1.1E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS01425 30a6798f159de52023d2d44b697b29f0 348 PANTHER PTHR13256:SF39 116 251 2.0E-22 T 22-04-2016 HMPREF9228_RS01425 30a6798f159de52023d2d44b697b29f0 348 Gene3D G3DSA:3.40.630.30 26 234 2.6E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS00985 4eb733be719fcb5ca89be03bc6413b69 394 PANTHER PTHR30344 49 209 1.7E-20 T 22-04-2016 HMPREF9228_RS00985 4eb733be719fcb5ca89be03bc6413b69 394 Gene3D G3DSA:2.130.10.10 46 390 2.5E-30 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 HMPREF9228_RS00985 4eb733be719fcb5ca89be03bc6413b69 394 SUPERFAMILY SSF75011 62 388 2.09E-13 T 22-04-2016 HMPREF9228_RS00985 4eb733be719fcb5ca89be03bc6413b69 394 PANTHER PTHR30344:SF1 49 209 1.7E-20 T 22-04-2016 HMPREF9228_RS00985 4eb733be719fcb5ca89be03bc6413b69 394 Pfam PF10282 Lactonase, 7-bladed beta-propeller 38 376 1.8E-34 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 HMPREF9228_RS07595 9553ed4de6c594aaa2881199c0e0b0a8 215 SUPERFAMILY SSF56784 3 202 8.27E-27 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS07595 9553ed4de6c594aaa2881199c0e0b0a8 215 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 175 2.5E-17 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 HMPREF9228_RS07595 9553ed4de6c594aaa2881199c0e0b0a8 215 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 173 1.1E-18 T 22-04-2016 HMPREF9228_RS07595 9553ed4de6c594aaa2881199c0e0b0a8 215 Gene3D G3DSA:3.40.50.1000 66 193 1.5E-25 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS00760 3622be9184453a5b6ec2c7b0717a089d 57 Pfam PF13936 Helix-turn-helix domain 5 47 2.3E-13 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain HMPREF9228_RS02900 d7a65a80abf71bf7df9e276ee1b01783 102 PANTHER PTHR30455 1 102 7.6E-34 T 22-04-2016 HMPREF9228_RS02900 d7a65a80abf71bf7df9e276ee1b01783 102 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 102 47.339 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 HMPREF9228_RS02900 d7a65a80abf71bf7df9e276ee1b01783 102 Pfam PF03477 ATP cone domain 3 87 9.1E-14 T 22-04-2016 IPR005144 ATP-cone domain HMPREF9228_RS02900 d7a65a80abf71bf7df9e276ee1b01783 102 PANTHER PTHR30455:SF2 1 102 7.6E-34 T 22-04-2016 HMPREF9228_RS08305 ada22816af610aca072af8d93129bfe1 305 Gene3D G3DSA:1.10.3720.10 76 304 1.2E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08305 ada22816af610aca072af8d93129bfe1 305 SUPERFAMILY SSF161098 70 295 2.49E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08305 ada22816af610aca072af8d93129bfe1 305 PANTHER PTHR30193 17 305 7.6E-96 T 22-04-2016 HMPREF9228_RS08305 ada22816af610aca072af8d93129bfe1 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 297 1.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS08305 ada22816af610aca072af8d93129bfe1 305 PANTHER PTHR30193:SF6 17 305 7.6E-96 T 22-04-2016 HMPREF9228_RS04710 5c26ed343b0fe642aab025ccccf46115 405 Pfam PF02687 FtsX-like permease family 275 387 8.9E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS04710 5c26ed343b0fe642aab025ccccf46115 405 PANTHER PTHR30287 2 403 2.7E-18 T 22-04-2016 HMPREF9228_RS07755 82eba91f87ece025df1780442162da02 441 SUPERFAMILY SSF53850 22 436 4.03E-67 T 22-04-2016 HMPREF9228_RS07755 82eba91f87ece025df1780442162da02 441 Pfam PF13416 Bacterial extracellular solute-binding protein 48 356 6.8E-40 T 22-04-2016 HMPREF9228_RS07755 82eba91f87ece025df1780442162da02 441 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 HMPREF9228_RS07755 82eba91f87ece025df1780442162da02 441 PANTHER PTHR30061:SF25 1 441 4.7E-62 T 22-04-2016 HMPREF9228_RS07755 82eba91f87ece025df1780442162da02 441 Gene3D G3DSA:3.40.190.10 164 344 3.5E-32 T 22-04-2016 HMPREF9228_RS07755 82eba91f87ece025df1780442162da02 441 PANTHER PTHR30061 1 441 4.7E-62 T 22-04-2016 HMPREF9228_RS07755 82eba91f87ece025df1780442162da02 441 Gene3D G3DSA:3.40.190.10 34 163 6.1E-23 T 22-04-2016 HMPREF9228_RS04930 b01203378478f80a28d9c944de16aa26 289 Gene3D G3DSA:3.40.50.150 41 234 1.1E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS04930 b01203378478f80a28d9c944de16aa26 289 SUPERFAMILY SSF53335 48 223 6.89E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS04930 b01203378478f80a28d9c944de16aa26 289 Pfam PF13649 Methyltransferase domain 72 168 8.4E-9 T 22-04-2016 HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 PRINTS PR00069 Aldo-keto reductase signature 163 192 1.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 PRINTS PR00069 Aldo-keto reductase signature 129 146 1.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 PRINTS PR00069 Aldo-keto reductase signature 200 224 1.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 PRINTS PR00069 Aldo-keto reductase signature 97 115 1.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.1E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 Gene3D G3DSA:3.20.20.100 17 272 3.6E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 SUPERFAMILY SSF51430 18 273 3.54E-81 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 PANTHER PTHR11732 20 268 1.6E-109 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 Pfam PF00248 Aldo/keto reductase family 23 198 8.0E-36 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 Pfam PF00248 Aldo/keto reductase family 208 264 8.9E-8 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02760 09f0e7374fc80d0da4c645ea739744d2 293 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 46 63 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS02365 ebe82536f1b3b9f3615dc5b291f6169f 65 TIGRFAM TIGR03687 pupylate_cterm: ubiquitin-like protein Pup 33 65 1.6E-17 T 22-04-2016 IPR008515 Ubiquitin-like, Pup UniPathway: UPA00997 HMPREF9228_RS02365 ebe82536f1b3b9f3615dc5b291f6169f 65 Pfam PF05639 Pup-like protein 7 65 1.5E-13 T 22-04-2016 IPR008515 Ubiquitin-like, Pup UniPathway: UPA00997 HMPREF9228_RS00200 8b325f4b41c9d47688c6b003452b8944 304 SUPERFAMILY SSF56300 14 280 5.17E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS00200 8b325f4b41c9d47688c6b003452b8944 304 Pfam PF00149 Calcineurin-like phosphoesterase 15 235 3.3E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 HMPREF9228_RS00200 8b325f4b41c9d47688c6b003452b8944 304 Gene3D G3DSA:3.60.21.10 15 254 1.1E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 518 2.6E-145 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 PANTHER PTHR11632 3 524 1.3E-183 T 22-04-2016 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 SUPERFAMILY SSF56425 222 340 4.04E-33 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 SUPERFAMILY SSF51905 4 246 1.22E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 SUPERFAMILY SSF51905 344 396 1.22E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 Gene3D G3DSA:1.20.58.100 441 511 8.9E-21 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 Gene3D G3DSA:3.90.700.10 228 336 5.2E-33 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 PANTHER PTHR11632:SF27 3 524 1.3E-183 T 22-04-2016 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.9E-9 T 22-04-2016 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 343 365 8.9E-9 T 22-04-2016 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 528 2.4E-16 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 Gene3D G3DSA:4.10.80.40 512 533 1.4E-5 T 22-04-2016 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 SUPERFAMILY SSF46977 441 531 2.88E-27 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 Pfam PF00890 FAD binding domain 6 380 2.2E-83 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 Gene3D G3DSA:3.50.50.60 337 396 3.0E-96 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS03155 b2ab647fe9b49301bbeb00888faa8578 534 Gene3D G3DSA:3.50.50.60 3 227 3.0E-96 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00090 ca67d78678f347f79b779f7871c99e1a 437 Gene3D G3DSA:3.40.50.300 3 122 7.6E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00090 ca67d78678f347f79b779f7871c99e1a 437 SUPERFAMILY SSF52980 337 388 6.97E-5 T 22-04-2016 IPR011335 Restriction endonuclease type II-like HMPREF9228_RS00090 ca67d78678f347f79b779f7871c99e1a 437 SUPERFAMILY SSF52540 6 233 1.43E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00090 ca67d78678f347f79b779f7871c99e1a 437 Pfam PF13635 Domain of unknown function (DUF4143) 225 386 2.5E-23 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 HMPREF9228_RS00090 ca67d78678f347f79b779f7871c99e1a 437 Pfam PF13173 AAA domain 19 152 5.2E-30 T 22-04-2016 HMPREF9228_RS00090 ca67d78678f347f79b779f7871c99e1a 437 PANTHER PTHR33295:SF7 1 384 3.2E-51 T 22-04-2016 HMPREF9228_RS00090 ca67d78678f347f79b779f7871c99e1a 437 PANTHER PTHR33295 1 384 3.2E-51 T 22-04-2016 HMPREF9228_RS03735 2fc6033a1f1c42646670cfd97c79c948 246 Pfam PF00696 Amino acid kinase family 9 216 5.5E-24 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS03735 2fc6033a1f1c42646670cfd97c79c948 246 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 8 238 2.6E-87 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 HMPREF9228_RS03735 2fc6033a1f1c42646670cfd97c79c948 246 SUPERFAMILY SSF53633 7 238 3.93E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS03735 2fc6033a1f1c42646670cfd97c79c948 246 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 238 40.807 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 HMPREF9228_RS03735 2fc6033a1f1c42646670cfd97c79c948 246 Gene3D G3DSA:3.40.1160.10 4 238 1.1E-76 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 HMPREF9228_RS03735 2fc6033a1f1c42646670cfd97c79c948 246 PANTHER PTHR21499 8 243 3.3E-92 T 22-04-2016 HMPREF9228_RS03735 2fc6033a1f1c42646670cfd97c79c948 246 PANTHER PTHR21499:SF23 8 243 3.3E-92 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 HMPREF9228_RS03735 2fc6033a1f1c42646670cfd97c79c948 246 PIRSF PIRSF005650 2 246 9.3E-81 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 HMPREF9228_RS02630 e2bd9aef282e6767dc035adf816dcef0 260 Pfam PF14512 Putative TM nitroreductase 7 244 3.4E-48 T 22-04-2016 IPR029478 Putative nitroreductase TM1586 HMPREF9228_RS02630 e2bd9aef282e6767dc035adf816dcef0 260 Gene3D G3DSA:3.40.109.30 175 245 7.2E-8 T 22-04-2016 HMPREF9228_RS02630 e2bd9aef282e6767dc035adf816dcef0 260 SUPERFAMILY SSF55469 7 251 4.17E-32 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 HMPREF9228_RS02630 e2bd9aef282e6767dc035adf816dcef0 260 Gene3D G3DSA:3.40.109.10 3 141 2.2E-21 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 HMPREF9228_RS06445 e84fe01bbe2fc5841fce61c1c1c09068 431 PANTHER PTHR35902 76 343 8.0E-13 T 22-04-2016 HMPREF9228_RS06445 e84fe01bbe2fc5841fce61c1c1c09068 431 Gene3D G3DSA:2.60.40.10 187 253 6.1E-6 T 22-04-2016 IPR013783 Immunoglobulin-like fold HMPREF9228_RS06445 e84fe01bbe2fc5841fce61c1c1c09068 431 Gene3D G3DSA:2.60.120.200 261 343 2.7E-4 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain HMPREF9228_RS06445 e84fe01bbe2fc5841fce61c1c1c09068 431 PANTHER PTHR35902:SF2 76 343 8.0E-13 T 22-04-2016 HMPREF9228_RS06445 e84fe01bbe2fc5841fce61c1c1c09068 431 SUPERFAMILY SSF49309 187 253 3.92E-5 T 22-04-2016 IPR008958 Transglutaminase, C-terminal GO:0003810|GO:0018149 HMPREF9228_RS02625 5957af8d91c9101e8ea86665c6369c6a 337 SUPERFAMILY SSF53448 12 276 4.29E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS02625 5957af8d91c9101e8ea86665c6369c6a 337 Gene3D G3DSA:3.90.550.10 14 246 1.2E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS02625 5957af8d91c9101e8ea86665c6369c6a 337 Pfam PF00535 Glycosyl transferase family 2 16 195 2.5E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS02625 5957af8d91c9101e8ea86665c6369c6a 337 PANTHER PTHR22916 1 308 5.4E-18 T 22-04-2016 HMPREF9228_RS03695 0aaa1579d7590548e30464beaf395dfa 573 SUPERFAMILY SSF53822 227 420 5.3E-8 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS03695 0aaa1579d7590548e30464beaf395dfa 573 Gene3D G3DSA:3.40.50.2300 227 280 2.0E-4 T 22-04-2016 HMPREF9228_RS03695 0aaa1579d7590548e30464beaf395dfa 573 Pfam PF13407 Periplasmic binding protein domain 226 408 6.6E-9 T 22-04-2016 IPR025997 Periplasmic binding protein HMPREF9228_RS01605 5521497c0a43f01499f83b5375d994e3 317 SUPERFAMILY SSF54534 208 314 3.14E-32 T 22-04-2016 HMPREF9228_RS01605 5521497c0a43f01499f83b5375d994e3 317 PANTHER PTHR10516:SF320 211 314 3.9E-26 T 22-04-2016 HMPREF9228_RS01605 5521497c0a43f01499f83b5375d994e3 317 Gene3D G3DSA:3.10.50.40 200 314 3.3E-31 T 22-04-2016 HMPREF9228_RS01605 5521497c0a43f01499f83b5375d994e3 317 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 222 314 2.1E-20 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 HMPREF9228_RS01605 5521497c0a43f01499f83b5375d994e3 317 PANTHER PTHR10516 211 314 3.9E-26 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type HMPREF9228_RS03955 9ebbef9def9b27c005c00481be187ef4 210 SMART SM00422 40 112 1.1E-4 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS03955 9ebbef9def9b27c005c00481be187ef4 210 Gene3D G3DSA:1.10.1660.10 45 118 4.2E-9 T 22-04-2016 HMPREF9228_RS03955 9ebbef9def9b27c005c00481be187ef4 210 PANTHER PTHR30204 30 197 1.7E-30 T 22-04-2016 HMPREF9228_RS03955 9ebbef9def9b27c005c00481be187ef4 210 PANTHER PTHR30204:SF3 30 197 1.7E-30 T 22-04-2016 HMPREF9228_RS03955 9ebbef9def9b27c005c00481be187ef4 210 Pfam PF13411 MerR HTH family regulatory protein 43 107 1.1E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS03955 9ebbef9def9b27c005c00481be187ef4 210 SUPERFAMILY SSF46955 43 130 7.78E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain HMPREF9228_RS08390 022c4cbdd2869b057da203a498e9a451 221 Pfam PF13302 Acetyltransferase (GNAT) domain 35 178 5.3E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS08390 022c4cbdd2869b057da203a498e9a451 221 Gene3D G3DSA:3.40.630.30 35 204 4.4E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS08390 022c4cbdd2869b057da203a498e9a451 221 PANTHER PTHR13256:SF24 35 206 5.4E-26 T 22-04-2016 HMPREF9228_RS08390 022c4cbdd2869b057da203a498e9a451 221 PANTHER PTHR13256 35 206 5.4E-26 T 22-04-2016 HMPREF9228_RS08390 022c4cbdd2869b057da203a498e9a451 221 SUPERFAMILY SSF55729 35 203 2.24E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS04485 ab6ae815e23dd2af6756a478bc01b576 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 3.0E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS04485 ab6ae815e23dd2af6756a478bc01b576 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 1.0E-7 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS04485 ab6ae815e23dd2af6756a478bc01b576 86 Gene3D G3DSA:1.20.58.110 3 86 3.9E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS04485 ab6ae815e23dd2af6756a478bc01b576 86 PANTHER PTHR33398 2 86 2.4E-26 T 22-04-2016 HMPREF9228_RS04485 ab6ae815e23dd2af6756a478bc01b576 86 Pfam PF01649 Ribosomal protein S20 2 84 3.5E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS04485 ab6ae815e23dd2af6756a478bc01b576 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.724 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS04485 ab6ae815e23dd2af6756a478bc01b576 86 SUPERFAMILY SSF46992 3 86 5.1E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 PANTHER PTHR24220 196 298 1.1E-71 T 22-04-2016 HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 PANTHER PTHR24220 10 132 1.1E-71 T 22-04-2016 HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 Gene3D G3DSA:3.40.50.300 201 298 1.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 Gene3D G3DSA:3.40.50.300 7 132 1.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 SMART SM00382 37 297 5.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 SUPERFAMILY SSF52540 8 126 1.44E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 SUPERFAMILY SSF52540 187 298 1.44E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 Pfam PF00005 ABC transporter 29 249 4.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS04705 33cb611a73f19851985035fdef47d992 303 ProSitePatterns PS00211 ABC transporters family signature. 222 236 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 SUPERFAMILY SSF55811 314 465 7.99E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 SUPERFAMILY SSF52972 158 279 2.29E-33 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 Pfam PF00293 NUDIX domain 356 458 5.5E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 Gene3D G3DSA:3.90.79.10 324 475 2.6E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 PANTHER PTHR22769 359 460 3.5E-14 T 22-04-2016 HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 ProSitePatterns PS00893 Nudix box signature. 380 401 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 Pfam PF02545 Maf-like protein 5 280 3.9E-38 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 Gene3D G3DSA:3.90.950.10 3 76 1.7E-58 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 Gene3D G3DSA:3.90.950.10 162 288 1.7E-58 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 Hamap MF_00528 Septum formation protein Maf [maf]. 4 288 23.278 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 HMPREF9228_RS08825 ee5818fa4dc5d7eb749b5c8769744ae7 483 SUPERFAMILY SSF52972 2 90 3.6E-7 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like HMPREF9228_RS09645 8eadd2325adea752e8852d64aa43f14a 88 PANTHER PTHR34386 1 80 6.4E-23 T 22-04-2016 HMPREF9228_RS09645 8eadd2325adea752e8852d64aa43f14a 88 Gene3D G3DSA:3.40.30.10 1 74 2.1E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS09645 8eadd2325adea752e8852d64aa43f14a 88 PANTHER PTHR34386:SF3 1 80 6.4E-23 T 22-04-2016 HMPREF9228_RS09645 8eadd2325adea752e8852d64aa43f14a 88 SUPERFAMILY SSF52833 1 72 9.37E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS09645 8eadd2325adea752e8852d64aa43f14a 88 Pfam PF00462 Glutaredoxin 3 55 1.5E-14 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 ProSitePatterns PS00585 Ribosomal protein S5 signature. 54 86 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 19 189 33.494 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 36 189 9.0E-63 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 Pfam PF00333 Ribosomal protein S5, N-terminal domain 38 101 1.3E-26 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 SUPERFAMILY SSF54768 34 102 3.35E-22 T 22-04-2016 HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 Gene3D G3DSA:3.30.160.20 35 98 1.9E-28 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 SUPERFAMILY SSF54211 105 184 2.33E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 PANTHER PTHR13718 35 185 1.2E-66 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 Gene3D G3DSA:3.30.230.10 103 184 3.6E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS08110 43b2efc519f07eac7839a4267165dba4 224 Pfam PF03719 Ribosomal protein S5, C-terminal domain 113 183 1.8E-29 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS03610 4ef714e5c9d444118ad3b597f6c39cd4 293 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 271 2.2E-25 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 HMPREF9228_RS03610 4ef714e5c9d444118ad3b597f6c39cd4 293 Pfam PF00814 Glycoprotease family 28 90 9.4E-14 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 HMPREF9228_RS03610 4ef714e5c9d444118ad3b597f6c39cd4 293 PANTHER PTHR11735 28 88 7.4E-13 T 22-04-2016 HMPREF9228_RS03610 4ef714e5c9d444118ad3b597f6c39cd4 293 SUPERFAMILY SSF53067 4 93 1.04E-15 T 22-04-2016 HMPREF9228_RS03610 4ef714e5c9d444118ad3b597f6c39cd4 293 Gene3D G3DSA:3.30.420.40 4 101 5.5E-25 T 22-04-2016 HMPREF9228_RS03610 4ef714e5c9d444118ad3b597f6c39cd4 293 Gene3D G3DSA:3.30.420.40 137 159 5.5E-25 T 22-04-2016 HMPREF9228_RS00445 aa4d014d3e4388e561c5d435e5c511b3 313 Hamap MF_00188 Protease HtpX [htpX]. 13 293 27.406 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 HMPREF9228_RS00445 aa4d014d3e4388e561c5d435e5c511b3 313 Gene3D G3DSA:3.30.2010.10 67 158 2.6E-31 T 22-04-2016 HMPREF9228_RS00445 aa4d014d3e4388e561c5d435e5c511b3 313 Pfam PF01435 Peptidase family M48 75 293 4.6E-37 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 HMPREF9228_RS00445 aa4d014d3e4388e561c5d435e5c511b3 313 PANTHER PTHR10120:SF19 12 260 5.1E-95 T 22-04-2016 HMPREF9228_RS00445 aa4d014d3e4388e561c5d435e5c511b3 313 PANTHER PTHR10120:SF19 276 312 5.1E-95 T 22-04-2016 HMPREF9228_RS00445 aa4d014d3e4388e561c5d435e5c511b3 313 PANTHER PTHR10120 12 260 5.1E-95 T 22-04-2016 HMPREF9228_RS00445 aa4d014d3e4388e561c5d435e5c511b3 313 PANTHER PTHR10120 276 312 5.1E-95 T 22-04-2016 HMPREF9228_RS01190 7e7a97a97d59722292024bee955fe8a4 563 Pfam PF13354 Beta-lactamase enzyme family 414 542 5.5E-16 T 22-04-2016 HMPREF9228_RS01190 7e7a97a97d59722292024bee955fe8a4 563 Gene3D G3DSA:3.40.710.10 347 563 5.5E-39 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS01190 7e7a97a97d59722292024bee955fe8a4 563 SUPERFAMILY SSF56601 351 556 2.95E-38 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 PANTHER PTHR11544 1 124 3.2E-20 T 22-04-2016 HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 PANTHER PTHR11544:SF43 1 124 3.2E-20 T 22-04-2016 HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 Gene3D G3DSA:2.40.50.140 1 67 3.5E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 PRINTS PR00050 Cold shock protein signature 4 19 2.4E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 PRINTS PR00050 Cold shock protein signature 24 33 2.4E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 PRINTS PR00050 Cold shock protein signature 38 56 2.4E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 3.4E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 SMART SM00357 3 65 2.0E-19 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 HMPREF9228_RS02470 21104c55678a75b157ee2a9356c253ca 129 SUPERFAMILY SSF50249 1 66 6.86E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS09765 e160abd24ac1e27b02edcc43993ac552 116 Pfam PF00825 Ribonuclease P 2 111 8.3E-26 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 HMPREF9228_RS09765 e160abd24ac1e27b02edcc43993ac552 116 Gene3D G3DSA:3.30.230.10 2 113 3.9E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS09765 e160abd24ac1e27b02edcc43993ac552 116 SUPERFAMILY SSF54211 2 112 6.07E-23 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS09765 e160abd24ac1e27b02edcc43993ac552 116 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 3 112 6.2E-19 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 HMPREF9228_RS09765 e160abd24ac1e27b02edcc43993ac552 116 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 114 12.934 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 HMPREF9228_RS09765 e160abd24ac1e27b02edcc43993ac552 116 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 4 90 3.0E-7 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 HMPREF9228_RS09765 e160abd24ac1e27b02edcc43993ac552 116 PANTHER PTHR33992 2 113 5.5E-21 T 22-04-2016 HMPREF9228_RS07885 371f097c7487f18c812bdc2627f219d8 210 Pfam PF13526 Protein of unknown function (DUF4125) 9 206 2.1E-75 T 22-04-2016 IPR025191 Protein of unknown function DUF4125 HMPREF9228_RS00040 4e806699abbf06fc8a53f562bb5397eb 337 Pfam PF13377 Periplasmic binding protein-like domain 169 332 1.8E-32 T 22-04-2016 HMPREF9228_RS00040 4e806699abbf06fc8a53f562bb5397eb 337 SUPERFAMILY SSF47413 2 49 5.16E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS00040 4e806699abbf06fc8a53f562bb5397eb 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 3.2E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00040 4e806699abbf06fc8a53f562bb5397eb 337 SMART SM00354 1 71 9.5E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS00040 4e806699abbf06fc8a53f562bb5397eb 337 Gene3D G3DSA:3.40.50.2300 149 332 2.4E-31 T 22-04-2016 HMPREF9228_RS00040 4e806699abbf06fc8a53f562bb5397eb 337 SUPERFAMILY SSF53822 72 331 1.97E-34 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS00040 4e806699abbf06fc8a53f562bb5397eb 337 PANTHER PTHR30146 1 331 4.0E-49 T 22-04-2016 HMPREF9228_RS00040 4e806699abbf06fc8a53f562bb5397eb 337 Gene3D G3DSA:1.10.260.40 1 47 4.5E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS06990 1ea4dcc656b2761b289f0f91bc593243 229 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 15 204 1.6E-33 T 22-04-2016 IPR013343 CRISPR-associated protein Cas4 HMPREF9228_RS06990 1ea4dcc656b2761b289f0f91bc593243 229 Pfam PF01930 Domain of unknown function DUF83 15 204 2.5E-31 T 22-04-2016 IPR022765 Dna2/Cas4, domain of unknown function DUF83 HMPREF9228_RS06630 de7a4402f230f95ed5668dd7a2469aac 308 Gene3D G3DSA:1.10.3720.10 17 299 1.2E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06630 de7a4402f230f95ed5668dd7a2469aac 308 SUPERFAMILY SSF161098 23 304 1.96E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06630 de7a4402f230f95ed5668dd7a2469aac 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 295 1.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS06630 de7a4402f230f95ed5668dd7a2469aac 308 PANTHER PTHR32243:SF13 18 307 7.1E-76 T 22-04-2016 HMPREF9228_RS06630 de7a4402f230f95ed5668dd7a2469aac 308 PANTHER PTHR32243 18 307 7.1E-76 T 22-04-2016 HMPREF9228_RS07175 0ff84b12943aa70a5339ce60136cca93 401 PANTHER PTHR31297 10 182 2.5E-67 T 22-04-2016 HMPREF9228_RS07175 0ff84b12943aa70a5339ce60136cca93 401 PANTHER PTHR31297 206 400 2.5E-67 T 22-04-2016 HMPREF9228_RS07175 0ff84b12943aa70a5339ce60136cca93 401 PANTHER PTHR31297:SF12 10 182 2.5E-67 T 22-04-2016 HMPREF9228_RS07175 0ff84b12943aa70a5339ce60136cca93 401 PANTHER PTHR31297:SF12 206 400 2.5E-67 T 22-04-2016 HMPREF9228_RS07175 0ff84b12943aa70a5339ce60136cca93 401 SUPERFAMILY SSF51445 11 400 5.73E-76 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS07175 0ff84b12943aa70a5339ce60136cca93 401 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 60 180 9.6E-11 T 22-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 HMPREF9228_RS07175 0ff84b12943aa70a5339ce60136cca93 401 Gene3D G3DSA:3.20.20.80 11 400 2.9E-90 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS04940 61b20c6ccfe7030f23c8a5411693cda9 421 Gene3D G3DSA:1.10.10.10 359 398 4.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04940 61b20c6ccfe7030f23c8a5411693cda9 421 Pfam PF02661 Fic/DOC family 154 255 3.3E-12 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS04940 61b20c6ccfe7030f23c8a5411693cda9 421 SUPERFAMILY SSF46785 333 396 5.17E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04940 61b20c6ccfe7030f23c8a5411693cda9 421 PANTHER PTHR13504 48 420 1.5E-53 T 22-04-2016 HMPREF9228_RS04940 61b20c6ccfe7030f23c8a5411693cda9 421 PANTHER PTHR13504:SF31 48 420 1.5E-53 T 22-04-2016 HMPREF9228_RS04940 61b20c6ccfe7030f23c8a5411693cda9 421 Gene3D G3DSA:1.10.3290.10 64 323 3.2E-40 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS04940 61b20c6ccfe7030f23c8a5411693cda9 421 SUPERFAMILY SSF140931 150 316 7.06E-21 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 Gene3D G3DSA:3.40.50.980 91 263 9.7E-32 T 22-04-2016 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 Gene3D G3DSA:3.40.50.980 408 465 6.7E-25 T 22-04-2016 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 Gene3D G3DSA:3.40.50.980 264 357 6.7E-25 T 22-04-2016 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 Gene3D G3DSA:2.30.38.10 480 536 6.4E-20 T 22-04-2016 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 Gene3D G3DSA:3.30.300.30 540 660 9.3E-5 T 22-04-2016 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 PANTHER PTHR24096:SF193 87 677 5.8E-171 T 22-04-2016 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 PANTHER PTHR24096 87 677 5.8E-171 T 22-04-2016 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 Pfam PF00501 AMP-binding enzyme 98 542 1.3E-84 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 SUPERFAMILY SSF56801 78 362 2.22E-110 T 22-04-2016 HMPREF9228_RS04530 85254db01dc4e32b171b98efc4895758 677 SUPERFAMILY SSF56801 411 667 2.22E-110 T 22-04-2016 HMPREF9228_RS09435 9a45aaf4af33fcc59959c5e70cdd4a18 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 279 1.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09435 9a45aaf4af33fcc59959c5e70cdd4a18 288 SUPERFAMILY SSF161098 18 288 4.84E-65 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09435 9a45aaf4af33fcc59959c5e70cdd4a18 288 Gene3D G3DSA:1.10.3720.10 15 276 8.5E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS09435 9a45aaf4af33fcc59959c5e70cdd4a18 288 PANTHER PTHR32243 14 288 9.7E-72 T 22-04-2016 HMPREF9228_RS08960 d8e00b9570131825eed613da76094e4b 213 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 212 40.07 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 HMPREF9228_RS08960 d8e00b9570131825eed613da76094e4b 213 SUPERFAMILY SSF53271 3 210 8.82E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS08960 d8e00b9570131825eed613da76094e4b 213 PANTHER PTHR10285 1 201 8.7E-69 T 22-04-2016 HMPREF9228_RS08960 d8e00b9570131825eed613da76094e4b 213 Pfam PF14681 Uracil phosphoribosyltransferase 5 210 2.8E-59 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS08960 d8e00b9570131825eed613da76094e4b 213 Gene3D G3DSA:3.40.50.2020 2 210 1.2E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS08960 d8e00b9570131825eed613da76094e4b 213 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 211 6.7E-74 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 HMPREF9228_RS08960 d8e00b9570131825eed613da76094e4b 213 PANTHER PTHR10285:SF46 1 201 8.7E-69 T 22-04-2016 HMPREF9228_RS09310 2f627188100e04c281f24040c5775856 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 7.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS09310 2f627188100e04c281f24040c5775856 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 7.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS09310 2f627188100e04c281f24040c5775856 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 7.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS09310 2f627188100e04c281f24040c5775856 172 SUPERFAMILY SSF46785 32 135 4.26E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09310 2f627188100e04c281f24040c5775856 172 Gene3D G3DSA:1.10.10.10 31 136 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09310 2f627188100e04c281f24040c5775856 172 SMART SM00347 19 119 2.4E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS09310 2f627188100e04c281f24040c5775856 172 Pfam PF01047 MarR family 35 86 3.4E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 HMPREF9228_RS09310 2f627188100e04c281f24040c5775856 172 PANTHER PTHR33164 36 146 4.7E-16 T 22-04-2016 HMPREF9228_RS01050 643cff63faad536aec82a71159c502e7 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 4.2E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01050 643cff63faad536aec82a71159c502e7 211 SUPERFAMILY SSF46689 11 82 3.8E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01050 643cff63faad536aec82a71159c502e7 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.2E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01050 643cff63faad536aec82a71159c502e7 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.2E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01050 643cff63faad536aec82a71159c502e7 211 SUPERFAMILY SSF48498 90 191 4.69E-15 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal HMPREF9228_RS01050 643cff63faad536aec82a71159c502e7 211 Pfam PF13305 WHG domain 95 163 4.6E-10 T 22-04-2016 IPR025996 WHG domain HMPREF9228_RS01050 643cff63faad536aec82a71159c502e7 211 Gene3D G3DSA:1.10.357.10 11 194 2.2E-37 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS01050 643cff63faad536aec82a71159c502e7 211 PANTHER PTHR30055 5 189 4.4E-26 T 22-04-2016 HMPREF9228_RS07405 22b51fafee905ff192ee1f3ae4cd28a0 203 Gene3D G3DSA:1.20.1250.20 2 58 4.2E-4 T 22-04-2016 HMPREF9228_RS07405 22b51fafee905ff192ee1f3ae4cd28a0 203 Gene3D G3DSA:1.20.1250.20 59 102 3.9E-4 T 22-04-2016 HMPREF9228_RS07405 22b51fafee905ff192ee1f3ae4cd28a0 203 PANTHER PTHR23501 1 176 8.2E-52 T 22-04-2016 HMPREF9228_RS07405 22b51fafee905ff192ee1f3ae4cd28a0 203 PANTHER PTHR23501:SF82 1 176 8.2E-52 T 22-04-2016 HMPREF9228_RS07405 22b51fafee905ff192ee1f3ae4cd28a0 203 SUPERFAMILY SSF103473 2 191 2.09E-7 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS07605 5d7c9f4912f6ed867561a5e5c16700f4 130 Pfam PF12728 Helix-turn-helix domain 48 99 5.4E-9 T 22-04-2016 HMPREF9228_RS07605 5d7c9f4912f6ed867561a5e5c16700f4 130 SUPERFAMILY SSF46955 47 102 3.02E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain HMPREF9228_RS07605 5d7c9f4912f6ed867561a5e5c16700f4 130 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 48 98 1.7E-7 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 HMPREF9228_RS02195 4610be72c55b8d708d29dfb71cb607c3 486 Pfam PF01943 Polysaccharide biosynthesis protein 16 279 3.9E-17 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 HMPREF9228_RS02195 4610be72c55b8d708d29dfb71cb607c3 486 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 335 470 5.3E-13 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain HMPREF9228_RS05125 fa84e24b468888dd381129a4bf26c835 433 Pfam PF00570 HRDC domain 236 295 2.1E-9 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 HMPREF9228_RS05125 fa84e24b468888dd381129a4bf26c835 433 SUPERFAMILY SSF53098 6 229 5.54E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05125 fa84e24b468888dd381129a4bf26c835 433 Gene3D G3DSA:1.10.150.80 242 289 5.4E-4 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 HMPREF9228_RS05125 fa84e24b468888dd381129a4bf26c835 433 Gene3D G3DSA:3.30.420.10 89 193 6.5E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS05125 fa84e24b468888dd381129a4bf26c835 433 PANTHER PTHR12124 71 283 4.2E-33 T 22-04-2016 HMPREF9228_RS05125 fa84e24b468888dd381129a4bf26c835 433 SMART SM00474 20 190 3.1E-24 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 HMPREF9228_RS05125 fa84e24b468888dd381129a4bf26c835 433 Pfam PF01612 3'-5' exonuclease 25 189 1.2E-25 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 HMPREF9228_RS05125 fa84e24b468888dd381129a4bf26c835 433 SUPERFAMILY SSF47819 219 293 2.06E-13 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 HMPREF9228_RS00475 0bea445665b9eb994d1327b0fee3d147 347 PANTHER PTHR28259 56 201 7.0E-19 T 22-04-2016 HMPREF9228_RS00475 0bea445665b9eb994d1327b0fee3d147 347 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 71 186 4.3E-15 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 HMPREF9228_RS00475 0bea445665b9eb994d1327b0fee3d147 347 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 69 191 13.966 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 Pfam PF02687 FtsX-like permease family 287 403 1.6E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 Pfam PF02687 FtsX-like permease family 829 944 4.6E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489:SF9 466 664 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489:SF9 1 99 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489:SF9 260 449 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489:SF9 120 202 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489:SF9 724 952 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489 466 664 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489 1 99 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489 260 449 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489 120 202 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 PANTHER PTHR30489 724 952 2.4E-109 T 22-04-2016 HMPREF9228_RS03215 0cc9516ee4527f092cad62a7c02fa1c4 952 Pfam PF12704 MacB-like periplasmic core domain 17 246 2.1E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain HMPREF9228_RS09745 2401f0290421a0d653627bf5671cd769 322 Gene3D G3DSA:3.40.50.300 52 310 5.9E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09745 2401f0290421a0d653627bf5671cd769 322 Pfam PF13614 AAA domain 54 233 3.3E-58 T 22-04-2016 IPR025669 AAA domain HMPREF9228_RS09745 2401f0290421a0d653627bf5671cd769 322 PANTHER PTHR13696:SF52 52 318 1.4E-79 T 22-04-2016 HMPREF9228_RS09745 2401f0290421a0d653627bf5671cd769 322 PANTHER PTHR13696 52 318 1.4E-79 T 22-04-2016 HMPREF9228_RS09745 2401f0290421a0d653627bf5671cd769 322 SUPERFAMILY SSF52540 54 310 2.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01830 a06b94751d4c275d0e7c61fcf3970a94 751 Pfam PF09972 Predicted membrane protein (DUF2207) 43 628 2.8E-97 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 Pfam PF02811 PHP domain 11 197 2.3E-41 T 22-04-2016 IPR004013 PHP domain GO:0003824 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 SMART SM00481 9 76 3.4E-29 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 320 758 1.4E-156 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 Gene3D G3DSA:2.40.50.140 1020 1101 1.1E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 Pfam PF01336 OB-fold nucleic acid binding domain 1024 1100 9.8E-10 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 SUPERFAMILY SSF89550 123 287 1.16E-32 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 SUPERFAMILY SSF89550 8 94 1.16E-32 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 Pfam PF14579 Helix-hairpin-helix motif 831 921 3.5E-23 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 8 1061 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 PANTHER PTHR32294 5 1183 0.0 T 22-04-2016 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 PANTHER PTHR32294:SF0 5 1183 0.0 T 22-04-2016 HMPREF9228_RS02750 bc4d468c4de1fca1ed4f689872ab2d9b 1185 Gene3D G3DSA:3.20.20.140 8 281 6.8E-45 T 22-04-2016 HMPREF9228_RS07080 8422cc94f5de86dae1785a3f78a5599d 327 PANTHER PTHR12304:SF19 1 327 2.6E-101 T 22-04-2016 HMPREF9228_RS07080 8422cc94f5de86dae1785a3f78a5599d 327 SUPERFAMILY SSF53590 4 324 8.63E-92 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain HMPREF9228_RS07080 8422cc94f5de86dae1785a3f78a5599d 327 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 291 5.8E-76 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain HMPREF9228_RS07080 8422cc94f5de86dae1785a3f78a5599d 327 PANTHER PTHR12304 1 327 2.6E-101 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase HMPREF9228_RS07080 8422cc94f5de86dae1785a3f78a5599d 327 Gene3D G3DSA:3.90.245.10 3 326 1.5E-106 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 Pfam PF00512 His Kinase A (phospho-acceptor) domain 132 195 2.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 332 8.7E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 8.7E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 350 8.7E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 351 9.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 PANTHER PTHR24423 72 351 4.4E-68 T 22-04-2016 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 SMART SM00304 76 130 1.0E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 SUPERFAMILY SSF47384 114 195 1.14E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 SUPERFAMILY SSF158472 76 127 1.96E-12 T 22-04-2016 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 SMART SM00388 131 195 2.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 Gene3D G3DSA:3.30.565.10 182 352 2.2E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 Gene3D G3DSA:1.10.287.130 121 181 7.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 SUPERFAMILY SSF55874 186 352 3.14E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 SMART SM00387 240 353 1.8E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05385 0b4e871384349098ee505997d96f9993 357 Pfam PF00672 HAMP domain 57 127 1.2E-19 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 HMPREF9228_RS04775 c79fe7a90a6b2357d6d807d5efa700d2 144 SUPERFAMILY SSF52266 6 114 8.99E-13 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS04775 c79fe7a90a6b2357d6d807d5efa700d2 144 Gene3D G3DSA:3.40.50.1110 3 102 1.1E-10 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS04775 c79fe7a90a6b2357d6d807d5efa700d2 144 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 123 5.4E-10 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 PANTHER PTHR26402 45 201 4.0E-35 T 22-04-2016 HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 Pfam PF03861 ANTAR domain 196 248 1.5E-17 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 SMART SM01012 193 248 9.0E-20 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 SMART SM00448 45 156 5.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 Gene3D G3DSA:3.40.50.2300 40 162 4.0E-36 T 22-04-2016 HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 SUPERFAMILY SSF52172 42 248 1.57E-49 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 PANTHER PTHR26402:SF474 45 201 4.0E-35 T 22-04-2016 HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 Pfam PF00072 Response regulator receiver domain 47 154 4.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS05305 aaa5222cfef3eccc1102cca60f0ae7f1 262 Gene3D G3DSA:1.10.10.10 196 254 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS09105 41bdbaaf03a72ed41395fa51c99acf14 321 PANTHER PTHR10859 1 293 3.1E-69 T 22-04-2016 HMPREF9228_RS09105 41bdbaaf03a72ed41395fa51c99acf14 321 Gene3D G3DSA:3.90.550.10 4 137 7.9E-13 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09105 41bdbaaf03a72ed41395fa51c99acf14 321 Pfam PF00535 Glycosyl transferase family 2 11 162 5.2E-16 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS09105 41bdbaaf03a72ed41395fa51c99acf14 321 PANTHER PTHR10859:SF95 1 293 3.1E-69 T 22-04-2016 HMPREF9228_RS09105 41bdbaaf03a72ed41395fa51c99acf14 321 SUPERFAMILY SSF53448 4 250 2.32E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS06845 83c129f16656c347054f0c6562045f48 343 PANTHER PTHR11835:SF49 1 324 1.6E-170 T 22-04-2016 HMPREF9228_RS06845 83c129f16656c347054f0c6562045f48 343 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 328 7.1E-92 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 HMPREF9228_RS06845 83c129f16656c347054f0c6562045f48 343 SUPERFAMILY SSF53659 3 343 8.28E-112 T 22-04-2016 HMPREF9228_RS06845 83c129f16656c347054f0c6562045f48 343 SMART SM01329 6 339 3.2E-162 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 HMPREF9228_RS06845 83c129f16656c347054f0c6562045f48 343 Hamap MF_01035 3-isopropylmalate dehydrogenase [leuB]. 5 343 60.778 T 22-04-2016 IPR023698 3-isopropylmalate dehydrogenase GO:0003862|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 HMPREF9228_RS06845 83c129f16656c347054f0c6562045f48 343 Gene3D G3DSA:3.40.718.10 4 337 3.2E-116 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 HMPREF9228_RS06845 83c129f16656c347054f0c6562045f48 343 PANTHER PTHR11835 1 324 1.6E-170 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 HMPREF9228_RS02525 9470e63bc7e7cb0e9b6ee9aeae29e297 183 Gene3D G3DSA:3.90.960.10 41 176 1.0E-18 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS02525 9470e63bc7e7cb0e9b6ee9aeae29e297 183 PANTHER PTHR30411:SF1 12 175 1.2E-21 T 22-04-2016 HMPREF9228_RS02525 9470e63bc7e7cb0e9b6ee9aeae29e297 183 Pfam PF04073 Aminoacyl-tRNA editing domain 70 163 8.0E-12 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS02525 9470e63bc7e7cb0e9b6ee9aeae29e297 183 SUPERFAMILY SSF55826 53 176 2.49E-17 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 HMPREF9228_RS02525 9470e63bc7e7cb0e9b6ee9aeae29e297 183 PANTHER PTHR30411 12 175 1.2E-21 T 22-04-2016 HMPREF9228_RS06695 d37cbb9d5ee01b0e832764e9e8c9565b 484 Gene3D G3DSA:3.30.420.10 253 429 7.5E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS06695 d37cbb9d5ee01b0e832764e9e8c9565b 484 SUPERFAMILY SSF53098 250 459 1.38E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07095 fd3537b7f5e27f4a2486f18907e47fd0 271 SMART SM00382 28 213 5.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS07095 fd3537b7f5e27f4a2486f18907e47fd0 271 PANTHER PTHR24220:SF66 4 233 8.3E-68 T 22-04-2016 HMPREF9228_RS07095 fd3537b7f5e27f4a2486f18907e47fd0 271 SUPERFAMILY SSF52540 3 228 1.49E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07095 fd3537b7f5e27f4a2486f18907e47fd0 271 Pfam PF00005 ABC transporter 19 164 3.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07095 fd3537b7f5e27f4a2486f18907e47fd0 271 Gene3D G3DSA:3.40.50.300 3 228 1.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07095 fd3537b7f5e27f4a2486f18907e47fd0 271 PANTHER PTHR24220 4 233 8.3E-68 T 22-04-2016 HMPREF9228_RS08440 97536b84f119a8fcab8fdeea46e0cda2 464 PANTHER PTHR11119 1 450 4.8E-127 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS08440 97536b84f119a8fcab8fdeea46e0cda2 464 PANTHER PTHR11119:SF9 1 450 4.8E-127 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 HMPREF9228_RS08440 97536b84f119a8fcab8fdeea46e0cda2 464 Pfam PF00860 Permease family 17 423 3.4E-42 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS08440 97536b84f119a8fcab8fdeea46e0cda2 464 PIRSF PIRSF005353 1 463 3.0E-171 T 22-04-2016 IPR026033 Purine permease PbuG-like HMPREF9228_RS02555 5a2c8f50503533fb569ed46f13ef0ad1 219 PANTHER PTHR30086 1 219 2.8E-49 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 HMPREF9228_RS02555 5a2c8f50503533fb569ed46f13ef0ad1 219 Pfam PF01810 LysE type translocator 14 212 9.8E-21 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 HMPREF9228_RS02555 5a2c8f50503533fb569ed46f13ef0ad1 219 PANTHER PTHR30086:SF0 1 219 2.8E-49 T 22-04-2016 HMPREF9228_RS07075 d28bcc7c9a931ab9bb4f7e9e55bcdd07 228 PANTHER PTHR18901 1 228 4.4E-31 T 22-04-2016 HMPREF9228_RS07075 d28bcc7c9a931ab9bb4f7e9e55bcdd07 228 PANTHER PTHR18901:SF23 1 228 4.4E-31 T 22-04-2016 HMPREF9228_RS07075 d28bcc7c9a931ab9bb4f7e9e55bcdd07 228 SUPERFAMILY SSF56784 1 217 4.94E-42 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS07075 d28bcc7c9a931ab9bb4f7e9e55bcdd07 228 Gene3D G3DSA:3.40.50.1000 1 17 1.6E-34 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS07075 d28bcc7c9a931ab9bb4f7e9e55bcdd07 228 Gene3D G3DSA:3.40.50.1000 87 219 1.6E-34 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS07075 d28bcc7c9a931ab9bb4f7e9e55bcdd07 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 188 1.1E-24 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS03005 bb36ce099bc094d2ff4e27b638aef2c3 270 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 4 255 4.5E-73 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS03005 bb36ce099bc094d2ff4e27b638aef2c3 270 Gene3D G3DSA:3.40.50.1360 3 267 9.7E-88 T 22-04-2016 HMPREF9228_RS03005 bb36ce099bc094d2ff4e27b638aef2c3 270 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 2 251 39.378 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS03005 bb36ce099bc094d2ff4e27b638aef2c3 270 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 19 234 6.4E-19 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 HMPREF9228_RS03005 bb36ce099bc094d2ff4e27b638aef2c3 270 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 129 147 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS03005 bb36ce099bc094d2ff4e27b638aef2c3 270 PANTHER PTHR11280 4 254 1.2E-104 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 HMPREF9228_RS03005 bb36ce099bc094d2ff4e27b638aef2c3 270 SUPERFAMILY SSF100950 3 263 6.98E-85 T 22-04-2016 HMPREF9228_RS06130 f2515cf20dee5b197046153d1b62c95f 161 PANTHER PTHR26402:SF476 4 156 7.1E-39 T 22-04-2016 HMPREF9228_RS06130 f2515cf20dee5b197046153d1b62c95f 161 PANTHER PTHR26402 4 156 7.1E-39 T 22-04-2016 HMPREF9228_RS06130 f2515cf20dee5b197046153d1b62c95f 161 Gene3D G3DSA:3.40.50.2300 2 122 3.7E-34 T 22-04-2016 HMPREF9228_RS06130 f2515cf20dee5b197046153d1b62c95f 161 Pfam PF00072 Response regulator receiver domain 6 115 1.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS06130 f2515cf20dee5b197046153d1b62c95f 161 SUPERFAMILY SSF52172 1 155 3.27E-36 T 22-04-2016 IPR011006 CheY-like superfamily HMPREF9228_RS06130 f2515cf20dee5b197046153d1b62c95f 161 SMART SM00448 4 115 2.6E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 HMPREF9228_RS04655 56921cc660ebef8e24c9e85faa375bf8 134 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 86 4.4E-18 T 22-04-2016 IPR009293 Uncharacterised protein family UPF0478 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 Gene3D G3DSA:3.40.50.300 99 384 1.6E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 96 3.2E-13 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 377 9.8E-69 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 Gene3D G3DSA:2.40.30.20 6 97 1.4E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 10 513 6.9E-229 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 SUPERFAMILY SSF52540 100 383 1.09E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 513 47.174 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 508 3.3E-41 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 SUPERFAMILY SSF50615 26 98 2.38E-22 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 PANTHER PTHR15184:SF3 1 497 1.8E-259 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 PANTHER PTHR15184 1 497 1.8E-259 T 22-04-2016 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 Gene3D G3DSA:1.20.150.20 385 513 7.6E-46 T 22-04-2016 HMPREF9228_RS01580 92f793403672c66aff444e30968cfead 543 SUPERFAMILY SSF47917 385 512 5.76E-41 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 HMPREF9228_RS08905 4c9e783f2921c271bc8fc66a0dd0c425 387 Pfam PF01180 Dihydroorotate dehydrogenase 192 386 6.9E-14 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 HMPREF9228_RS08905 4c9e783f2921c271bc8fc66a0dd0c425 387 SUPERFAMILY SSF51395 146 385 5.64E-40 T 22-04-2016 HMPREF9228_RS08905 4c9e783f2921c271bc8fc66a0dd0c425 387 SUPERFAMILY SSF51395 64 119 5.64E-40 T 22-04-2016 HMPREF9228_RS08905 4c9e783f2921c271bc8fc66a0dd0c425 387 Gene3D G3DSA:3.20.20.70 65 386 1.7E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS05505 a37dfbb9ede65b0e1510a6cbb34dfc58 199 Pfam PF01195 Peptidyl-tRNA hydrolase 7 195 3.0E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 HMPREF9228_RS05505 a37dfbb9ede65b0e1510a6cbb34dfc58 199 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 115 125 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 HMPREF9228_RS05505 a37dfbb9ede65b0e1510a6cbb34dfc58 199 Gene3D G3DSA:3.40.50.1470 3 198 9.4E-67 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 HMPREF9228_RS05505 a37dfbb9ede65b0e1510a6cbb34dfc58 199 PANTHER PTHR17224 6 197 1.6E-64 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 HMPREF9228_RS05505 a37dfbb9ede65b0e1510a6cbb34dfc58 199 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 190 32.272 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 HMPREF9228_RS05505 a37dfbb9ede65b0e1510a6cbb34dfc58 199 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 7 197 2.2E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 HMPREF9228_RS05505 a37dfbb9ede65b0e1510a6cbb34dfc58 199 SUPERFAMILY SSF53178 5 197 6.28E-59 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 HMPREF9228_RS05505 a37dfbb9ede65b0e1510a6cbb34dfc58 199 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 HMPREF9228_RS03065 91e65eadff93c510496394bbf7deb2dc 318 SUPERFAMILY SSF74650 6 314 1.13E-58 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS03065 91e65eadff93c510496394bbf7deb2dc 318 PANTHER PTHR10091 10 215 1.3E-22 T 22-04-2016 HMPREF9228_RS03065 91e65eadff93c510496394bbf7deb2dc 318 Pfam PF01263 Aldose 1-epimerase 11 313 9.0E-43 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 HMPREF9228_RS03065 91e65eadff93c510496394bbf7deb2dc 318 Gene3D G3DSA:2.70.98.10 5 315 1.9E-46 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 PANTHER PTHR12592:SF0 200 542 2.2E-41 T 22-04-2016 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 PANTHER PTHR12592:SF0 6 121 2.2E-41 T 22-04-2016 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 PANTHER PTHR12592:SF0 139 183 2.2E-41 T 22-04-2016 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 SUPERFAMILY SSF64153 18 291 3.01E-37 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 Pfam PF01256 Carbohydrate kinase 293 549 1.0E-28 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 SUPERFAMILY SSF53613 274 545 5.73E-42 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 Gene3D G3DSA:3.40.50.10260 15 258 5.2E-51 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 271 587 16.1 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 Pfam PF03853 YjeF-related protein N-terminus 36 237 1.4E-35 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 Gene3D G3DSA:3.40.1190.20 263 584 2.6E-72 T 22-04-2016 IPR029056 Ribokinase-like HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 PANTHER PTHR12592 200 542 2.2E-41 T 22-04-2016 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 PANTHER PTHR12592 6 121 2.2E-41 T 22-04-2016 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 PANTHER PTHR12592 139 183 2.2E-41 T 22-04-2016 HMPREF9228_RS04245 0cda01380b94425062b6de3c9d5832ed 587 PIRSF PIRSF017184 14 569 8.7E-147 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 HMPREF9228_RS08540 886d95e11b7f85f0a78b9a1a04c0595d 195 PANTHER PTHR33508:SF1 4 195 3.4E-48 T 22-04-2016 HMPREF9228_RS08540 886d95e11b7f85f0a78b9a1a04c0595d 195 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 188 8.7E-38 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 HMPREF9228_RS08540 886d95e11b7f85f0a78b9a1a04c0595d 195 PANTHER PTHR33508 4 195 3.4E-48 T 22-04-2016 HMPREF9228_RS08540 886d95e11b7f85f0a78b9a1a04c0595d 195 Pfam PF01914 MarC family integral membrane protein 2 190 1.5E-45 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 HMPREF9228_RS04575 941cad188fcf25320dd4b46ad2acbd64 194 SUPERFAMILY SSF117916 88 181 7.19E-27 T 22-04-2016 HMPREF9228_RS04575 941cad188fcf25320dd4b46ad2acbd64 194 Pfam PF01883 Domain of unknown function DUF59 91 154 5.7E-19 T 22-04-2016 IPR002744 Domain of unknown function DUF59 HMPREF9228_RS04575 941cad188fcf25320dd4b46ad2acbd64 194 PANTHER PTHR13696 85 187 1.9E-12 T 22-04-2016 HMPREF9228_RS09755 c4924080a7e0fd4a8d7ad0379d51d949 178 Gene3D G3DSA:3.30.300.120 14 93 1.5E-21 T 22-04-2016 HMPREF9228_RS09755 c4924080a7e0fd4a8d7ad0379d51d949 178 Pfam PF01424 R3H domain 104 160 3.9E-16 T 22-04-2016 IPR001374 R3H domain GO:0003676 HMPREF9228_RS09755 c4924080a7e0fd4a8d7ad0379d51d949 178 SMART SM00393 84 162 3.1E-20 T 22-04-2016 IPR001374 R3H domain GO:0003676 HMPREF9228_RS09755 c4924080a7e0fd4a8d7ad0379d51d949 178 Pfam PF13083 KH domain 19 90 1.0E-7 T 22-04-2016 HMPREF9228_RS09755 c4924080a7e0fd4a8d7ad0379d51d949 178 Gene3D G3DSA:3.30.1370.50 95 173 1.8E-25 T 22-04-2016 IPR001374 R3H domain GO:0003676 HMPREF9228_RS09755 c4924080a7e0fd4a8d7ad0379d51d949 178 PANTHER PTHR20953:SF0 9 159 7.8E-44 T 22-04-2016 HMPREF9228_RS09755 c4924080a7e0fd4a8d7ad0379d51d949 178 SUPERFAMILY SSF82708 111 160 3.53E-13 T 22-04-2016 IPR001374 R3H domain GO:0003676 HMPREF9228_RS09755 c4924080a7e0fd4a8d7ad0379d51d949 178 PANTHER PTHR20953 9 159 7.8E-44 T 22-04-2016 HMPREF9228_RS00115 7cc367db2f9f6229ae1086ce5952f0a0 187 PANTHER PTHR10681:SF121 1 187 1.4E-70 T 22-04-2016 HMPREF9228_RS00115 7cc367db2f9f6229ae1086ce5952f0a0 187 PANTHER PTHR10681 1 187 1.4E-70 T 22-04-2016 HMPREF9228_RS00115 7cc367db2f9f6229ae1086ce5952f0a0 187 PIRSF PIRSF000239 1 187 5.9E-54 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 HMPREF9228_RS00115 7cc367db2f9f6229ae1086ce5952f0a0 187 SUPERFAMILY SSF52833 3 186 7.48E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS00115 7cc367db2f9f6229ae1086ce5952f0a0 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 1.6E-7 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 HMPREF9228_RS00115 7cc367db2f9f6229ae1086ce5952f0a0 187 Pfam PF00578 AhpC/TSA family 6 133 2.5E-31 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 HMPREF9228_RS00115 7cc367db2f9f6229ae1086ce5952f0a0 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 186 2.1E-82 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 HMPREF9228_RS00115 7cc367db2f9f6229ae1086ce5952f0a0 187 Gene3D G3DSA:3.40.30.10 4 183 1.2E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 Gene3D G3DSA:3.30.420.10 19 51 2.0E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 Gene3D G3DSA:3.30.420.10 89 242 2.0E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 PANTHER PTHR10954:SF10 92 151 2.7E-35 T 22-04-2016 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 PANTHER PTHR10954:SF10 8 53 2.7E-35 T 22-04-2016 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 PANTHER PTHR10954:SF10 168 282 2.7E-35 T 22-04-2016 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 SUPERFAMILY SSF53098 9 44 1.18E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 Pfam PF01351 Ribonuclease HII 207 283 3.9E-12 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 PANTHER PTHR10954 92 151 2.7E-35 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 PANTHER PTHR10954 8 53 2.7E-35 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 PANTHER PTHR10954 168 282 2.7E-35 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 SUPERFAMILY SSF53098 75 147 9.1E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02055 470bf5c8c603463e38a157812b6f889b 285 SUPERFAMILY SSF53098 192 283 9.1E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02345 c827b8df54f9feb728438bf0a273418c 372 PANTHER PTHR30505 13 366 2.4E-71 T 22-04-2016 HMPREF9228_RS02345 c827b8df54f9feb728438bf0a273418c 372 PANTHER PTHR30505:SF0 13 366 2.4E-71 T 22-04-2016 HMPREF9228_RS02345 c827b8df54f9feb728438bf0a273418c 372 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 11 343 6.2E-60 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 HMPREF9228_RS05570 204c061d533ee55996e05dac3524c6a8 171 Pfam PF00583 Acetyltransferase (GNAT) family 33 109 8.7E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS05570 204c061d533ee55996e05dac3524c6a8 171 SUPERFAMILY SSF55729 12 131 1.05E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS05570 204c061d533ee55996e05dac3524c6a8 171 PANTHER PTHR13256 8 130 2.2E-13 T 22-04-2016 HMPREF9228_RS05570 204c061d533ee55996e05dac3524c6a8 171 Gene3D G3DSA:3.40.630.30 10 131 2.9E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 253 330 3.1E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 PANTHER PTHR22769 107 309 2.2E-19 T 22-04-2016 HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 Gene3D G3DSA:3.40.50.1240 253 379 1.8E-17 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 SMART SM00855 252 370 6.4E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 Pfam PF00293 NUDIX domain 108 237 8.3E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 PANTHER PTHR22769:SF27 107 309 2.2E-19 T 22-04-2016 HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 Gene3D G3DSA:3.90.79.10 106 243 1.9E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 SUPERFAMILY SSF53254 253 378 1.18E-13 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 SUPERFAMILY SSF55811 203 243 4.2E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 SUPERFAMILY SSF55811 107 170 4.2E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS08940 0597d1e4a831e4af7ebae2720efc36a6 471 ProSitePatterns PS00893 Nudix box signature. 124 145 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 HMPREF9228_RS05745 e9e57aa194b077972b0ad92f741854e5 292 PANTHER PTHR33514 42 284 1.4E-23 T 22-04-2016 HMPREF9228_RS05745 e9e57aa194b077972b0ad92f741854e5 292 Pfam PF02361 Cobalt transport protein 77 246 2.5E-14 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component HMPREF9228_RS09325 fbd0d331bda86a54ac54123fd39b2153 233 PANTHER PTHR24220:SF577 5 216 1.1E-93 T 22-04-2016 HMPREF9228_RS09325 fbd0d331bda86a54ac54123fd39b2153 233 SMART SM00382 32 215 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09325 fbd0d331bda86a54ac54123fd39b2153 233 Pfam PF00005 ABC transporter 23 166 2.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09325 fbd0d331bda86a54ac54123fd39b2153 233 SUPERFAMILY SSF52540 4 219 5.44E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09325 fbd0d331bda86a54ac54123fd39b2153 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09325 fbd0d331bda86a54ac54123fd39b2153 233 PANTHER PTHR24220 5 216 1.1E-93 T 22-04-2016 HMPREF9228_RS09325 fbd0d331bda86a54ac54123fd39b2153 233 Gene3D G3DSA:3.40.50.300 3 218 2.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00735 d678db70c2985efa477d26adcc0372ce 289 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 112 197 8.0E-20 T 22-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain HMPREF9228_RS00735 d678db70c2985efa477d26adcc0372ce 289 PANTHER PTHR30595:SF6 1 289 4.9E-26 T 22-04-2016 HMPREF9228_RS00735 d678db70c2985efa477d26adcc0372ce 289 PANTHER PTHR30595 1 289 4.9E-26 T 22-04-2016 HMPREF9228_RS00815 9e623279d53efb99aff4f4bace40a861 486 Gene3D G3DSA:1.10.10.60 5 38 3.3E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS00815 9e623279d53efb99aff4f4bace40a861 486 PANTHER PTHR35004:SF2 5 441 1.9E-26 T 22-04-2016 HMPREF9228_RS00815 9e623279d53efb99aff4f4bace40a861 486 SUPERFAMILY SSF46689 4 111 1.08E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS00815 9e623279d53efb99aff4f4bace40a861 486 Pfam PF00665 Integrase core domain 133 249 8.6E-8 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS00815 9e623279d53efb99aff4f4bace40a861 486 PANTHER PTHR35004 5 441 1.9E-26 T 22-04-2016 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 Gene3D G3DSA:3.40.190.10 110 172 3.9E-19 T 22-04-2016 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 PANTHER PTHR21022:SF0 1 305 9.0E-45 T 22-04-2016 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 Gene3D G3DSA:3.30.70.260 202 285 3.2E-15 T 22-04-2016 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 SUPERFAMILY SSF53850 4 188 7.38E-39 T 22-04-2016 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 PIRSF PIRSF001500 2 287 1.8E-35 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 Pfam PF00800 Prephenate dehydratase 7 185 2.0E-28 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 SUPERFAMILY SSF55021 193 285 3.05E-14 T 22-04-2016 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 Gene3D G3DSA:3.40.190.10 3 97 1.7E-17 T 22-04-2016 HMPREF9228_RS03200 5676bd1d53bb836b76671369ea1c8154 326 PANTHER PTHR21022 1 305 9.0E-45 T 22-04-2016 HMPREF9228_RS07735 34341dce87153165d09c1e9593ff0137 493 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 26 484 3.2E-125 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 HMPREF9228_RS07735 34341dce87153165d09c1e9593ff0137 493 Gene3D G3DSA:1.20.1250.20 30 244 3.4E-6 T 22-04-2016 HMPREF9228_RS07735 34341dce87153165d09c1e9593ff0137 493 Gene3D G3DSA:1.20.1250.20 265 468 1.3E-10 T 22-04-2016 HMPREF9228_RS07735 34341dce87153165d09c1e9593ff0137 493 Pfam PF13347 MFS/sugar transport protein 29 471 6.4E-96 T 22-04-2016 HMPREF9228_RS07735 34341dce87153165d09c1e9593ff0137 493 PANTHER PTHR11328 22 487 6.8E-44 T 22-04-2016 HMPREF9228_RS07735 34341dce87153165d09c1e9593ff0137 493 SUPERFAMILY SSF103473 29 470 1.57E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.3E-22 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 1.3E-22 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.3E-22 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.3E-22 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.3E-22 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 SUPERFAMILY SSF51905 2 316 3.79E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 Gene3D G3DSA:3.50.50.60 117 316 2.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 Gene3D G3DSA:3.50.50.60 2 116 7.0E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 SUPERFAMILY SSF55424 325 445 5.84E-25 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PANTHER PTHR22912:SF147 4 444 5.3E-107 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 334 431 7.7E-6 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PANTHER PTHR22912 4 444 5.3E-107 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 309 3.8E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 1.4E-13 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 1.4E-13 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 253 1.4E-13 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 111 120 1.4E-13 T 22-04-2016 HMPREF9228_RS08875 0c93b3148ba7e7c34ed44002ecdaf310 448 Gene3D G3DSA:3.30.390.30 338 446 4.6E-25 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 HMPREF9228_RS02350 40012f0678bc28775e154e65352439f6 238 PANTHER PTHR11749 3 223 1.4E-61 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS02350 40012f0678bc28775e154e65352439f6 238 Gene3D G3DSA:3.20.20.70 1 217 5.0E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS02350 40012f0678bc28775e154e65352439f6 238 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS02350 40012f0678bc28775e154e65352439f6 238 PANTHER PTHR11749:SF3 3 223 1.4E-61 T 22-04-2016 HMPREF9228_RS02350 40012f0678bc28775e154e65352439f6 238 SUPERFAMILY SSF51366 4 218 8.48E-47 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 HMPREF9228_RS02350 40012f0678bc28775e154e65352439f6 238 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 200 7.2E-52 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 Gene3D G3DSA:3.40.50.300 1 184 5.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 PRINTS PR00094 Adenylate kinase signature 32 46 1.6E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 PRINTS PR00094 Adenylate kinase signature 4 17 1.6E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 PRINTS PR00094 Adenylate kinase signature 133 148 1.6E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 PRINTS PR00094 Adenylate kinase signature 81 97 1.6E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 PRINTS PR00094 Adenylate kinase signature 150 164 1.6E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 PANTHER PTHR23359 1 186 5.8E-74 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 Pfam PF00406 Adenylate kinase 5 163 2.0E-49 T 22-04-2016 HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 SUPERFAMILY SSF52540 1 186 2.09E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS08090 c061ed2aef4073459167ba2da0750e09 186 Hamap MF_00235 Adenylate kinase [adk]. 1 186 45.53 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 316 33.921 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 PIRSF PIRSF004486 2 317 1.8E-96 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 PANTHER PTHR11265 1 318 8.9E-114 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 PANTHER PTHR11265:SF0 1 318 8.9E-114 T 22-04-2016 HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 Pfam PF01795 MraW methylase family 7 314 8.2E-104 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 Gene3D G3DSA:3.40.50.150 8 117 3.9E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 Gene3D G3DSA:3.40.50.150 224 315 3.9E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 Gene3D G3DSA:1.10.150.170 120 223 3.8E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 SUPERFAMILY SSF53335 8 120 4.59E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 SUPERFAMILY SSF53335 221 314 4.59E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 SUPERFAMILY SSF81799 121 221 1.44E-32 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS02920 6bc5c7d6d5351969f139167d56fe0dbf 350 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 314 3.4E-90 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 HMPREF9228_RS02655 a230c37235159a54a4a42518d38c4df9 477 SUPERFAMILY SSF56574 34 469 3.4E-68 T 22-04-2016 IPR023796 Serpin domain HMPREF9228_RS02655 a230c37235159a54a4a42518d38c4df9 477 Gene3D G3DSA:2.30.39.10 242 359 4.9E-30 T 22-04-2016 HMPREF9228_RS02655 a230c37235159a54a4a42518d38c4df9 477 SMART SM00093 88 470 5.0E-29 T 22-04-2016 IPR023796 Serpin domain HMPREF9228_RS02655 a230c37235159a54a4a42518d38c4df9 477 PANTHER PTHR11461 98 317 6.3E-58 T 22-04-2016 IPR000215 Serpin family GO:0005615 HMPREF9228_RS02655 a230c37235159a54a4a42518d38c4df9 477 PANTHER PTHR11461 337 469 6.3E-58 T 22-04-2016 IPR000215 Serpin family GO:0005615 HMPREF9228_RS02655 a230c37235159a54a4a42518d38c4df9 477 Gene3D G3DSA:3.30.497.10 73 241 9.8E-45 T 22-04-2016 HMPREF9228_RS02655 a230c37235159a54a4a42518d38c4df9 477 Gene3D G3DSA:3.30.497.10 360 452 9.8E-45 T 22-04-2016 HMPREF9228_RS02655 a230c37235159a54a4a42518d38c4df9 477 Pfam PF00079 Serpin (serine protease inhibitor) 81 469 1.2E-72 T 22-04-2016 IPR023796 Serpin domain HMPREF9228_RS03780 b76b05fec103141b15427cd14db0dcbf 298 PANTHER PTHR41778:SF1 5 167 6.2E-22 T 22-04-2016 HMPREF9228_RS03780 b76b05fec103141b15427cd14db0dcbf 298 PANTHER PTHR41778:SF1 199 258 6.2E-22 T 22-04-2016 HMPREF9228_RS03780 b76b05fec103141b15427cd14db0dcbf 298 PANTHER PTHR41778 5 167 6.2E-22 T 22-04-2016 HMPREF9228_RS03780 b76b05fec103141b15427cd14db0dcbf 298 PANTHER PTHR41778 199 258 6.2E-22 T 22-04-2016 HMPREF9228_RS04595 01a643fa0a0e9ae22d4b09e94d81910e 411 PANTHER PTHR30508 132 407 1.4E-74 T 22-04-2016 HMPREF9228_RS04595 01a643fa0a0e9ae22d4b09e94d81910e 411 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 118 388 3.0E-81 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 HMPREF9228_RS04595 01a643fa0a0e9ae22d4b09e94d81910e 411 PANTHER PTHR30508:SF0 132 407 1.4E-74 T 22-04-2016 HMPREF9228_RS04595 01a643fa0a0e9ae22d4b09e94d81910e 411 Pfam PF01458 Uncharacterized protein family (UPF0051) 152 371 4.7E-61 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 HMPREF9228_RS04595 01a643fa0a0e9ae22d4b09e94d81910e 411 SUPERFAMILY SSF101960 43 396 1.18E-80 T 22-04-2016 HMPREF9228_RS00540 8b3f7189e740bcd46316c5d345dfa98f 1470 SUPERFAMILY SSF49373 770 840 2.28E-7 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments HMPREF9228_RS00540 8b3f7189e740bcd46316c5d345dfa98f 1470 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 41 386 1.7E-8 T 22-04-2016 IPR026588 Choice-of-anchor A domain HMPREF9228_RS00540 8b3f7189e740bcd46316c5d345dfa98f 1470 Pfam PF05738 Cna protein B-type domain 1142 1197 3.6E-8 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain HMPREF9228_RS00540 8b3f7189e740bcd46316c5d345dfa98f 1470 Pfam PF05738 Cna protein B-type domain 1011 1053 1.5E-8 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain HMPREF9228_RS00540 8b3f7189e740bcd46316c5d345dfa98f 1470 Gene3D G3DSA:2.60.40.1080 767 840 5.8E-7 T 22-04-2016 HMPREF9228_RS05515 cc0f7cf56883944d7e174decb5f8b667 1085 Pfam PF03699 Uncharacterised protein family (UPF0182) 75 902 4.3E-269 T 22-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 HMPREF9228_RS05515 cc0f7cf56883944d7e174decb5f8b667 1085 PANTHER PTHR39344 359 1000 5.3E-254 T 22-04-2016 HMPREF9228_RS05515 cc0f7cf56883944d7e174decb5f8b667 1085 PANTHER PTHR39344 1042 1085 5.3E-254 T 22-04-2016 HMPREF9228_RS05515 cc0f7cf56883944d7e174decb5f8b667 1085 PANTHER PTHR39344 52 340 5.3E-254 T 22-04-2016 HMPREF9228_RS05515 cc0f7cf56883944d7e174decb5f8b667 1085 Hamap MF_01600 UPF0182 protein . 55 978 17.822 T 22-04-2016 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 HMPREF9228_RS03670 4d9f2ecfcdb399a1a989108c1f4a623f 260 SUPERFAMILY SSF140931 59 212 5.75E-17 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS03670 4d9f2ecfcdb399a1a989108c1f4a623f 260 Pfam PF02661 Fic/DOC family 81 172 6.9E-5 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS03670 4d9f2ecfcdb399a1a989108c1f4a623f 260 Gene3D G3DSA:1.10.3290.10 14 212 2.2E-20 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS09815 a2878d9d7b87092871e9e8445b06fe6b 46 SUPERFAMILY SSF46955 8 45 2.61E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain HMPREF9228_RS09815 a2878d9d7b87092871e9e8445b06fe6b 46 Pfam PF00376 MerR family regulatory protein 9 45 5.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS09815 a2878d9d7b87092871e9e8445b06fe6b 46 Gene3D G3DSA:1.10.1660.10 8 45 8.2E-10 T 22-04-2016 HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 Pfam PF00248 Aldo/keto reductase family 15 286 1.7E-53 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 PRINTS PR00069 Aldo-keto reductase signature 147 164 2.6E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 PRINTS PR00069 Aldo-keto reductase signature 223 247 2.6E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 PRINTS PR00069 Aldo-keto reductase signature 40 64 2.6E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 PRINTS PR00069 Aldo-keto reductase signature 182 211 2.6E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 Gene3D G3DSA:3.20.20.100 14 286 4.8E-64 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 PANTHER PTHR11732 2 286 6.8E-69 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 PANTHER PTHR11732:SF275 2 286 6.8E-69 T 22-04-2016 HMPREF9228_RS01845 47047fd370669cb929387b6c8d60bf91 287 SUPERFAMILY SSF51430 12 286 8.12E-62 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS08420 2df24b0779fc987763bb676fba58b3c4 436 Pfam PF00498 FHA domain 23 84 1.2E-7 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS08420 2df24b0779fc987763bb676fba58b3c4 436 SUPERFAMILY SSF49879 19 88 4.02E-9 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 HMPREF9228_RS08420 2df24b0779fc987763bb676fba58b3c4 436 Gene3D G3DSA:2.60.200.20 12 111 5.8E-11 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 HMPREF9228_RS02550 d5e049503348492c485524e955d80535 514 Gene3D G3DSA:1.20.144.10 46 287 1.1E-42 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HMPREF9228_RS02550 d5e049503348492c485524e955d80535 514 SUPERFAMILY SSF48317 98 261 1.83E-23 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HMPREF9228_RS02550 d5e049503348492c485524e955d80535 514 Pfam PF01569 PAP2 superfamily 191 257 5.4E-9 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HMPREF9228_RS02550 d5e049503348492c485524e955d80535 514 PRINTS PR00483 Bacterial acid phosphatase class A signature 230 254 6.3E-7 T 22-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 HMPREF9228_RS02550 d5e049503348492c485524e955d80535 514 PRINTS PR00483 Bacterial acid phosphatase class A signature 198 224 6.3E-7 T 22-04-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 212 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 218 226 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 47 60 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 43 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 30 7.1E-18 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 15 500 6.6E-120 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 Gene3D G3DSA:3.40.50.620 15 79 7.4E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 Gene3D G3DSA:3.40.50.620 204 258 7.4E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 Gene3D G3DSA:3.90.800.10 80 202 6.5E-36 T 22-04-2016 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 PANTHER PTHR11451:SF41 13 378 1.4E-81 T 22-04-2016 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 Gene3D G3DSA:1.10.10.350 406 500 5.5E-16 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 PANTHER PTHR11451 13 378 1.4E-81 T 22-04-2016 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 14 331 7.1E-80 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 Gene3D G3DSA:1.10.1160.10 261 343 2.2E-27 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 SUPERFAMILY SSF52374 15 326 4.02E-96 T 22-04-2016 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 15 503 30.121 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 HMPREF9228_RS00995 3b52c8d8efc22847c33277590f96c40b 506 SUPERFAMILY SSF48163 328 500 2.35E-28 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 HMPREF9228_RS05480 fa5fbcf4ebc4ef6628785065e9b2d101 188 PANTHER PTHR37163:SF1 4 177 4.9E-32 T 22-04-2016 HMPREF9228_RS05480 fa5fbcf4ebc4ef6628785065e9b2d101 188 PANTHER PTHR37163 4 177 4.9E-32 T 22-04-2016 HMPREF9228_RS05480 fa5fbcf4ebc4ef6628785065e9b2d101 188 Pfam PF04417 Protein of unknown function (DUF501) 43 171 1.1E-39 T 22-04-2016 IPR007511 Protein of unknown function DUF501 HMPREF9228_RS02450 edcba1f3d2a30e84686cf43e3a9e48b6 96 Gene3D G3DSA:1.10.287.1060 3 95 3.0E-26 T 22-04-2016 HMPREF9228_RS02450 edcba1f3d2a30e84686cf43e3a9e48b6 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 3 91 1.1E-17 T 22-04-2016 IPR010310 Type VII secretion system ESAT-6-like HMPREF9228_RS02450 edcba1f3d2a30e84686cf43e3a9e48b6 96 SUPERFAMILY SSF140453 2 95 2.22E-20 T 22-04-2016 IPR010310 Type VII secretion system ESAT-6-like HMPREF9228_RS02450 edcba1f3d2a30e84686cf43e3a9e48b6 96 Pfam PF06013 Proteins of 100 residues with WXG 3 88 2.3E-17 T 22-04-2016 IPR010310 Type VII secretion system ESAT-6-like HMPREF9228_RS01015 1ee178e78c3d01642c799ccb196002c2 233 Pfam PF06912 Protein of unknown function (DUF1275) 1 215 6.7E-26 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 HMPREF9228_RS01075 7b245defd94157742d7d45172695e5ae 106 SUPERFAMILY SSF46689 4 99 2.51E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01075 7b245defd94157742d7d45172695e5ae 106 Pfam PF01527 Transposase 1 87 2.8E-9 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 HMPREF9228_RS01075 7b245defd94157742d7d45172695e5ae 106 Gene3D G3DSA:1.10.10.60 8 95 9.5E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01075 7b245defd94157742d7d45172695e5ae 106 PANTHER PTHR33215 1 106 1.2E-20 T 22-04-2016 HMPREF9228_RS09155 f218f9ba5f199c1970de0ee278d3bd36 803 PANTHER PTHR30540 112 547 8.8E-114 T 22-04-2016 HMPREF9228_RS09155 f218f9ba5f199c1970de0ee278d3bd36 803 Pfam PF02705 K+ potassium transporter 109 647 4.6E-165 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 HMPREF9228_RS09155 f218f9ba5f199c1970de0ee278d3bd36 803 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 100 744 26.081 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup HMPREF9228_RS05935 a3f7f19406b31f8c77a06fe80cdb8281 410 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 384 2.6E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS05935 a3f7f19406b31f8c77a06fe80cdb8281 410 Gene3D G3DSA:3.40.640.10 3 250 2.0E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS05935 a3f7f19406b31f8c77a06fe80cdb8281 410 PANTHER PTHR11808:SF15 3 389 6.4E-156 T 22-04-2016 HMPREF9228_RS05935 a3f7f19406b31f8c77a06fe80cdb8281 410 Gene3D G3DSA:3.90.1150.10 252 386 7.1E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS05935 a3f7f19406b31f8c77a06fe80cdb8281 410 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 195 209 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS05935 a3f7f19406b31f8c77a06fe80cdb8281 410 SUPERFAMILY SSF53383 23 386 9.21E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS05935 a3f7f19406b31f8c77a06fe80cdb8281 410 PIRSF PIRSF001434 1 388 4.0E-130 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS05935 a3f7f19406b31f8c77a06fe80cdb8281 410 PANTHER PTHR11808 3 389 6.4E-156 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 HMPREF9228_RS04825 d8dbc7a68351fcffb5e52c803dbe5786 207 PANTHER PTHR37298 1 207 7.8E-43 T 22-04-2016 HMPREF9228_RS04825 d8dbc7a68351fcffb5e52c803dbe5786 207 Pfam PF01865 Protein of unknown function DUF47 21 204 3.1E-23 T 22-04-2016 IPR018445 Putative phosphate transport regulator HMPREF9228_RS03500 3eaf2418fd6dab878a9dcea20e6f9cc2 422 Gene3D G3DSA:3.40.190.10 34 166 4.0E-19 T 22-04-2016 HMPREF9228_RS03500 3eaf2418fd6dab878a9dcea20e6f9cc2 422 Gene3D G3DSA:3.40.190.10 167 351 2.5E-31 T 22-04-2016 HMPREF9228_RS03500 3eaf2418fd6dab878a9dcea20e6f9cc2 422 PANTHER PTHR30061:SF24 4 422 1.1E-60 T 22-04-2016 HMPREF9228_RS03500 3eaf2418fd6dab878a9dcea20e6f9cc2 422 SUPERFAMILY SSF53850 22 419 7.56E-63 T 22-04-2016 HMPREF9228_RS03500 3eaf2418fd6dab878a9dcea20e6f9cc2 422 PANTHER PTHR30061 4 422 1.1E-60 T 22-04-2016 HMPREF9228_RS03500 3eaf2418fd6dab878a9dcea20e6f9cc2 422 Pfam PF13416 Bacterial extracellular solute-binding protein 53 354 7.0E-32 T 22-04-2016 HMPREF9228_RS06165 2da7042b7dbaf5f2d712b0839bde2fe9 162 Pfam PF04138 GtrA-like protein 45 132 9.1E-9 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 HMPREF9228_RS07280 f3c38bae6ca0e55e4fbdecdb571aebaa 187 Pfam PF00583 Acetyltransferase (GNAT) family 95 176 4.2E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 HMPREF9228_RS07280 f3c38bae6ca0e55e4fbdecdb571aebaa 187 SUPERFAMILY SSF55729 2 180 4.12E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS07280 f3c38bae6ca0e55e4fbdecdb571aebaa 187 PANTHER PTHR23091 1 67 5.8E-18 T 22-04-2016 HMPREF9228_RS07280 f3c38bae6ca0e55e4fbdecdb571aebaa 187 PANTHER PTHR23091 96 175 5.8E-18 T 22-04-2016 HMPREF9228_RS07280 f3c38bae6ca0e55e4fbdecdb571aebaa 187 Gene3D G3DSA:3.40.630.30 2 186 2.4E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS07260 81308b42e878bc1f7791f112713a989b 322 Gene3D G3DSA:3.30.420.150 133 315 8.5E-48 T 22-04-2016 HMPREF9228_RS07260 81308b42e878bc1f7791f112713a989b 322 SUPERFAMILY SSF53067 137 316 1.94E-39 T 22-04-2016 HMPREF9228_RS07260 81308b42e878bc1f7791f112713a989b 322 Pfam PF02541 Ppx/GppA phosphatase family 36 314 3.8E-68 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 HMPREF9228_RS07260 81308b42e878bc1f7791f112713a989b 322 PANTHER PTHR30005 3 319 1.6E-78 T 22-04-2016 HMPREF9228_RS07260 81308b42e878bc1f7791f112713a989b 322 Gene3D G3DSA:3.30.420.40 5 130 4.1E-33 T 22-04-2016 HMPREF9228_RS07260 81308b42e878bc1f7791f112713a989b 322 SUPERFAMILY SSF53067 10 133 1.55E-28 T 22-04-2016 HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 49 7.8E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 19 33 7.8E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 SUPERFAMILY SSF48008 84 218 1.28E-17 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 SMART SM00895 88 211 2.5E-7 T 22-04-2016 IPR011711 GntR, C-terminal HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 PANTHER PTHR11751 82 105 4.5E-19 T 22-04-2016 HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 PANTHER PTHR11751 1 62 4.5E-19 T 22-04-2016 HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 Gene3D G3DSA:1.10.10.10 2 62 1.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 Pfam PF07729 FCD domain 88 210 3.6E-13 T 22-04-2016 IPR011711 GntR, C-terminal HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 59 4.6E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 SMART SM00345 2 59 1.3E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 Gene3D G3DSA:1.20.120.530 84 221 2.8E-18 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal HMPREF9228_RS00885 ff0861b0d29111a840e6733e6b712128 225 SUPERFAMILY SSF46785 2 73 3.08E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04920 cd5ec48a1c052e7142b3d541aa50e508 107 SUPERFAMILY SSF50118 1 106 7.36E-21 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor HMPREF9228_RS04920 cd5ec48a1c052e7142b3d541aa50e508 107 Gene3D G3DSA:2.30.30.110 2 106 3.9E-16 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor HMPREF9228_RS04920 cd5ec48a1c052e7142b3d541aa50e508 107 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 103 2.0E-17 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 HMPREF9228_RS06925 6e6c14d65168219e29c702322366f83e 455 Pfam PF00665 Integrase core domain 125 217 8.2E-11 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS06925 6e6c14d65168219e29c702322366f83e 455 PANTHER PTHR35004 24 406 3.2E-25 T 22-04-2016 HMPREF9228_RS06925 6e6c14d65168219e29c702322366f83e 455 Gene3D G3DSA:3.30.420.10 134 216 3.0E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS06925 6e6c14d65168219e29c702322366f83e 455 PANTHER PTHR35004:SF2 24 406 3.2E-25 T 22-04-2016 HMPREF9228_RS06925 6e6c14d65168219e29c702322366f83e 455 SUPERFAMILY SSF53098 128 216 7.02E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07695 bb8fe8add44e6ef7dc3d2188747d02a5 134 Pfam PF05713 Bacterial mobilisation protein (MobC) 73 112 1.7E-9 T 22-04-2016 IPR008687 Bacterial mobilisation HMPREF9228_RS07980 f0b28a5a89f0e410ddba9df0895e08e3 143 PANTHER PTHR33221 1 134 1.3E-16 T 22-04-2016 HMPREF9228_RS07980 f0b28a5a89f0e410ddba9df0895e08e3 143 Gene3D G3DSA:1.10.10.10 5 135 3.0E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07980 f0b28a5a89f0e410ddba9df0895e08e3 143 Pfam PF02082 Transcriptional regulator 5 78 2.6E-17 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type HMPREF9228_RS07980 f0b28a5a89f0e410ddba9df0895e08e3 143 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 45 63 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site HMPREF9228_RS07980 f0b28a5a89f0e410ddba9df0895e08e3 143 SUPERFAMILY SSF46785 5 133 6.64E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS00905 b2f3fbf7678c3d0ebe3117fd500287a5 392 SUPERFAMILY SSF48317 109 291 2.75E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HMPREF9228_RS00905 b2f3fbf7678c3d0ebe3117fd500287a5 392 Pfam PF01569 PAP2 superfamily 204 289 3.8E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HMPREF9228_RS00905 b2f3fbf7678c3d0ebe3117fd500287a5 392 Gene3D G3DSA:1.20.144.10 155 290 7.7E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HMPREF9228_RS00905 b2f3fbf7678c3d0ebe3117fd500287a5 392 SMART SM00014 183 287 5.1E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase HMPREF9228_RS03145 3bf263be693cb953fca6e95da85aeb6b 275 Gene3D G3DSA:3.90.79.10 9 161 2.2E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS03145 3bf263be693cb953fca6e95da85aeb6b 275 SUPERFAMILY SSF46785 173 235 7.07E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03145 3bf263be693cb953fca6e95da85aeb6b 275 PANTHER PTHR22769:SF42 53 224 7.8E-31 T 22-04-2016 HMPREF9228_RS03145 3bf263be693cb953fca6e95da85aeb6b 275 PANTHER PTHR22769 53 224 7.8E-31 T 22-04-2016 HMPREF9228_RS03145 3bf263be693cb953fca6e95da85aeb6b 275 Gene3D G3DSA:1.10.10.10 165 239 2.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS03145 3bf263be693cb953fca6e95da85aeb6b 275 SUPERFAMILY SSF55811 53 169 1.9E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS07955 91e9975ca44cba1904da24865406ae41 393 SUPERFAMILY SSF111331 51 363 1.44E-53 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain HMPREF9228_RS07955 91e9975ca44cba1904da24865406ae41 393 Pfam PF00781 Diacylglycerol kinase catalytic domain 51 171 2.8E-23 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 HMPREF9228_RS07955 91e9975ca44cba1904da24865406ae41 393 PANTHER PTHR12358 10 373 1.3E-23 T 22-04-2016 HMPREF9228_RS07955 91e9975ca44cba1904da24865406ae41 393 SMART SM00046 50 172 5.1E-4 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 HMPREF9228_RS07955 91e9975ca44cba1904da24865406ae41 393 Gene3D G3DSA:3.40.50.10330 56 173 5.7E-8 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 HMPREF9228_RS07955 91e9975ca44cba1904da24865406ae41 393 PANTHER PTHR12358:SF43 10 373 1.3E-23 T 22-04-2016 HMPREF9228_RS01410 2479191c1c0f69bde708038fab27e393 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 95 2.2E-20 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 HMPREF9228_RS01410 2479191c1c0f69bde708038fab27e393 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 1 96 22.042 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 HMPREF9228_RS01410 2479191c1c0f69bde708038fab27e393 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 2.7E-14 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 HMPREF9228_RS01410 2479191c1c0f69bde708038fab27e393 99 PANTHER PTHR15004:SF0 1 99 4.8E-20 T 22-04-2016 HMPREF9228_RS01410 2479191c1c0f69bde708038fab27e393 99 PANTHER PTHR15004 1 99 4.8E-20 T 22-04-2016 HMPREF9228_RS01410 2479191c1c0f69bde708038fab27e393 99 SUPERFAMILY SSF141000 4 94 1.44E-22 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 HMPREF9228_RS09615 c44ba37649da35052ae25898d8ab0ed6 386 Gene3D G3DSA:3.90.550.10 2 206 9.9E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09615 c44ba37649da35052ae25898d8ab0ed6 386 SUPERFAMILY SSF53448 5 232 4.5E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09615 c44ba37649da35052ae25898d8ab0ed6 386 PANTHER PTHR22916 1 223 9.1E-57 T 22-04-2016 HMPREF9228_RS09615 c44ba37649da35052ae25898d8ab0ed6 386 PANTHER PTHR22916:SF24 1 223 9.1E-57 T 22-04-2016 HMPREF9228_RS09615 c44ba37649da35052ae25898d8ab0ed6 386 Pfam PF00535 Glycosyl transferase family 2 8 137 2.0E-37 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS03815 b144b326da1e60da7239dd63cc922544 89 Pfam PF04221 RelB antitoxin 3 83 5.8E-14 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ HMPREF9228_RS03815 b144b326da1e60da7239dd63cc922544 89 PANTHER PTHR38781 1 89 4.0E-12 T 22-04-2016 HMPREF9228_RS03815 b144b326da1e60da7239dd63cc922544 89 PANTHER PTHR38781:SF1 1 89 4.0E-12 T 22-04-2016 HMPREF9228_RS03815 b144b326da1e60da7239dd63cc922544 89 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 3 87 1.1E-16 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ HMPREF9228_RS04835 f66b0fa912e6a5fcfd44e466ab8010f6 431 Pfam PF00128 Alpha amylase, catalytic domain 49 333 1.5E-44 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS04835 f66b0fa912e6a5fcfd44e466ab8010f6 431 SMART SM00642 22 372 1.9E-39 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 HMPREF9228_RS04835 f66b0fa912e6a5fcfd44e466ab8010f6 431 PANTHER PTHR10357 13 396 3.3E-55 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 HMPREF9228_RS04835 f66b0fa912e6a5fcfd44e466ab8010f6 431 Gene3D G3DSA:3.20.20.80 13 373 1.1E-78 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS04835 f66b0fa912e6a5fcfd44e466ab8010f6 431 PANTHER PTHR10357:SF10 13 396 3.3E-55 T 22-04-2016 HMPREF9228_RS04835 f66b0fa912e6a5fcfd44e466ab8010f6 431 SUPERFAMILY SSF51445 12 379 1.57E-71 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 Pfam PF07532 Bacterial Ig-like domain (group 4) 445 508 1.4E-14 T 22-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 SUPERFAMILY SSF51445 50 435 3.81E-100 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 Pfam PF07523 Bacterial Ig-like domain (group 3) 749 821 1.6E-13 T 22-04-2016 IPR022038 Bacterial Ig-like domain HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 Pfam PF07745 Glycosyl hydrolase family 53 53 429 8.4E-135 T 22-04-2016 IPR011683 Glycosyl hydrolase family 53 GO:0015926 HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 PANTHER PTHR34983 405 454 7.7E-136 T 22-04-2016 HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 PANTHER PTHR34983 2 374 7.7E-136 T 22-04-2016 HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 Gene3D G3DSA:3.20.20.80 36 437 1.5E-148 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 PANTHER PTHR34983:SF1 405 454 7.7E-136 T 22-04-2016 HMPREF9228_RS02115 419d41589ec5269baf7afd33f29d91e1 897 PANTHER PTHR34983:SF1 2 374 7.7E-136 T 22-04-2016 HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 10 393 7.9E-111 T 22-04-2016 IPR019880 Succinyldiaminopimelate transaminase, DapC, actinobacteria HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 PANTHER PTHR11751:SF354 9 208 7.0E-85 T 22-04-2016 HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 PANTHER PTHR11751:SF354 232 393 7.0E-85 T 22-04-2016 HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 Pfam PF00155 Aminotransferase class I and II 29 393 2.1E-37 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 Gene3D G3DSA:3.90.1150.10 296 393 1.9E-12 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 SUPERFAMILY SSF53383 20 393 2.04E-63 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 PANTHER PTHR11751 9 208 7.0E-85 T 22-04-2016 HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 PANTHER PTHR11751 232 393 7.0E-85 T 22-04-2016 HMPREF9228_RS08340 aeaf1f424898d24b8827ea000d17f038 395 Gene3D G3DSA:3.40.640.10 41 295 5.0E-42 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS07710 52600cbf1112aa7654cb7aa95f722571 525 SMART SM00470 24 112 2.0E-23 T 22-04-2016 IPR003115 ParB/Sulfiredoxin HMPREF9228_RS07710 52600cbf1112aa7654cb7aa95f722571 525 Pfam PF02195 ParB-like nuclease domain 25 111 9.2E-19 T 22-04-2016 IPR003115 ParB/Sulfiredoxin HMPREF9228_RS07710 52600cbf1112aa7654cb7aa95f722571 525 Gene3D G3DSA:3.90.1530.10 22 118 6.4E-25 T 22-04-2016 HMPREF9228_RS07710 52600cbf1112aa7654cb7aa95f722571 525 SUPERFAMILY SSF109709 116 204 2.28E-11 T 22-04-2016 HMPREF9228_RS07710 52600cbf1112aa7654cb7aa95f722571 525 PANTHER PTHR33375:SF1 23 213 8.8E-34 T 22-04-2016 HMPREF9228_RS07710 52600cbf1112aa7654cb7aa95f722571 525 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 21 195 2.2E-30 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 HMPREF9228_RS07710 52600cbf1112aa7654cb7aa95f722571 525 PANTHER PTHR33375 23 213 8.8E-34 T 22-04-2016 HMPREF9228_RS07710 52600cbf1112aa7654cb7aa95f722571 525 SUPERFAMILY SSF110849 23 145 1.73E-21 T 22-04-2016 IPR003115 ParB/Sulfiredoxin HMPREF9228_RS07565 872e587be88d62b143d5445db58256ed 423 Gene3D G3DSA:1.10.10.10 10 73 1.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS07565 872e587be88d62b143d5445db58256ed 423 Pfam PF13730 Helix-turn-helix domain 16 71 1.1E-12 T 22-04-2016 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 PANTHER PTHR18937 1 791 5.5E-245 T 22-04-2016 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 PANTHER PTHR18937 813 963 5.5E-245 T 22-04-2016 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 PANTHER PTHR18937 1004 1214 5.5E-245 T 22-04-2016 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1215 21.118 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 SUPERFAMILY SSF52540 1099 1206 6.26E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 SUPERFAMILY SSF52540 1 210 6.26E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 Gene3D G3DSA:3.40.50.300 822 823 2.3E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 Gene3D G3DSA:3.40.50.300 1079 1211 2.3E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 Gene3D G3DSA:3.40.50.300 1 163 2.3E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 SUPERFAMILY SSF75553 466 664 9.29E-12 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 PIRSF PIRSF005719 1 1215 3.5E-273 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1213 5.0E-253 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1206 1.9E-72 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 Pfam PF06470 SMC proteins Flexible Hinge Domain 509 624 1.3E-7 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 PANTHER PTHR18937:SF261 1 791 5.5E-245 T 22-04-2016 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 PANTHER PTHR18937:SF261 813 963 5.5E-245 T 22-04-2016 HMPREF9228_RS03030 44b0b11fdf1ac690e5c6a342251f9d31 1215 PANTHER PTHR18937:SF261 1004 1214 5.5E-245 T 22-04-2016 HMPREF9228_RS05910 829b4b0d9bfcb3a01df0d3f69563a928 281 SUPERFAMILY SSF52151 10 273 6.54E-37 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 HMPREF9228_RS05910 829b4b0d9bfcb3a01df0d3f69563a928 281 PANTHER PTHR14226 3 281 4.1E-42 T 22-04-2016 HMPREF9228_RS05910 829b4b0d9bfcb3a01df0d3f69563a928 281 PANTHER PTHR14226:SF25 3 281 4.1E-42 T 22-04-2016 HMPREF9228_RS05910 829b4b0d9bfcb3a01df0d3f69563a928 281 Pfam PF01734 Patatin-like phospholipase 10 174 6.6E-15 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 HMPREF9228_RS06365 cc94a178539c145ee7f33cf7ab8cafa7 55 SUPERFAMILY SSF57829 1 30 1.34E-5 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 HMPREF9228_RS06365 cc94a178539c145ee7f33cf7ab8cafa7 55 Pfam PF01783 Ribosomal L32p protein family 2 29 1.4E-7 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS06365 cc94a178539c145ee7f33cf7ab8cafa7 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 53 12.198 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS06365 cc94a178539c145ee7f33cf7ab8cafa7 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 29 3.0E-7 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 HMPREF9228_RS07600 b5f1b2bf3d9b862f4415e48d1caab594 1449 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 843 1024 3.7E-48 T 22-04-2016 IPR026345 Adhesin isopeptide-forming adherence domain HMPREF9228_RS07600 b5f1b2bf3d9b862f4415e48d1caab594 1449 Pfam PF16364 Cell surface antigen C-terminus 984 1183 5.1E-28 T 22-04-2016 IPR032300 Cell surface antigen, C-terminal HMPREF9228_RS04725 ad941a1b895b543c937752d21abebf4a 193 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 192 38.679 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 HMPREF9228_RS04725 ad941a1b895b543c937752d21abebf4a 193 PANTHER PTHR11776 1 189 1.1E-65 T 22-04-2016 HMPREF9228_RS04725 ad941a1b895b543c937752d21abebf4a 193 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 186 9.0E-67 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 HMPREF9228_RS04725 ad941a1b895b543c937752d21abebf4a 193 PANTHER PTHR11776:SF1 1 189 1.1E-65 T 22-04-2016 HMPREF9228_RS04725 ad941a1b895b543c937752d21abebf4a 193 Pfam PF00156 Phosphoribosyl transferase domain 46 155 8.8E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 HMPREF9228_RS04725 ad941a1b895b543c937752d21abebf4a 193 Gene3D G3DSA:3.40.50.2020 1 189 1.3E-57 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS04725 ad941a1b895b543c937752d21abebf4a 193 SUPERFAMILY SSF53271 1 182 8.44E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS06005 16899304288e609d2546cc3ac3398994 437 SUPERFAMILY SSF51445 49 333 7.61E-16 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS06005 16899304288e609d2546cc3ac3398994 437 PANTHER PTHR11177:SF203 23 331 4.4E-47 T 22-04-2016 HMPREF9228_RS06005 16899304288e609d2546cc3ac3398994 437 Gene3D G3DSA:2.10.10.20 384 434 5.9E-6 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 HMPREF9228_RS06005 16899304288e609d2546cc3ac3398994 437 SUPERFAMILY SSF51055 383 434 3.92E-6 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 HMPREF9228_RS06005 16899304288e609d2546cc3ac3398994 437 PANTHER PTHR11177 23 331 4.4E-47 T 22-04-2016 HMPREF9228_RS06005 16899304288e609d2546cc3ac3398994 437 Gene3D G3DSA:3.20.20.80 74 344 1.1E-10 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS06005 16899304288e609d2546cc3ac3398994 437 Pfam PF00704 Glycosyl hydrolases family 18 72 329 3.5E-10 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 HMPREF9228_RS06005 16899304288e609d2546cc3ac3398994 437 Pfam PF02839 Carbohydrate binding domain 386 430 1.4E-6 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 HMPREF9228_RS03270 fbb5c249d91006ff338bc0be72f399c2 194 Gene3D G3DSA:3.40.50.2300 93 168 4.3E-5 T 22-04-2016 HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 PANTHER PTHR11922 85 165 5.6E-50 T 22-04-2016 HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 PANTHER PTHR11922 26 66 5.6E-50 T 22-04-2016 HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 PANTHER PTHR11922 189 260 5.6E-50 T 22-04-2016 HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 PANTHER PTHR11922:SF18 85 165 5.6E-50 T 22-04-2016 HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 PANTHER PTHR11922:SF18 26 66 5.6E-50 T 22-04-2016 HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 PANTHER PTHR11922:SF18 189 260 5.6E-50 T 22-04-2016 HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 Pfam PF07722 Peptidase C26 18 240 9.1E-58 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 SUPERFAMILY SSF52317 28 260 9.5E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS04695 42261ee41733af29580402482d9d80ea 260 Gene3D G3DSA:3.40.50.880 3 260 2.6E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS09525 cbb3a15c94ce6b32419fade93662d0ee 286 PANTHER PTHR11122 15 285 1.3E-50 T 22-04-2016 HMPREF9228_RS09525 cbb3a15c94ce6b32419fade93662d0ee 286 SUPERFAMILY SSF74650 9 283 2.39E-54 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS09525 cbb3a15c94ce6b32419fade93662d0ee 286 Gene3D G3DSA:2.70.98.10 8 284 2.1E-71 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 HMPREF9228_RS09525 cbb3a15c94ce6b32419fade93662d0ee 286 Pfam PF01263 Aldose 1-epimerase 10 283 1.8E-32 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 HMPREF9228_RS09525 cbb3a15c94ce6b32419fade93662d0ee 286 PIRSF PIRSF016020 3 286 5.5E-44 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 Gene3D G3DSA:1.10.275.10 9 114 8.5E-31 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PANTHER PTHR11444:SF3 1 468 7.7E-189 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 Hamap MF_00006 Argininosuccinate lyase [argH]. 9 466 38.35 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 Pfam PF14698 Argininosuccinate lyase C-terminal 371 443 8.4E-17 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 7.1E-50 T 22-04-2016 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 7.1E-50 T 22-04-2016 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 7.1E-50 T 22-04-2016 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 7.1E-50 T 22-04-2016 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 7.1E-50 T 22-04-2016 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 7.1E-50 T 22-04-2016 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 Gene3D G3DSA:1.10.40.30 382 443 1.2E-23 T 22-04-2016 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 Pfam PF00206 Lyase 20 308 1.7E-60 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 Gene3D G3DSA:1.20.200.10 115 381 2.2E-90 T 22-04-2016 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 SUPERFAMILY SSF48557 13 470 4.24E-124 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 5.2E-23 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 5.2E-23 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 5.2E-23 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 5.2E-23 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 PANTHER PTHR11444 1 468 7.7E-189 T 22-04-2016 IPR000362 Fumarate lyase family HMPREF9228_RS05655 ba776f8bb3ee71f55bc820384b0fe338 490 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 468 1.0E-166 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 HMPREF9228_RS01985 5e34d226cb6f305cb8843b56011a775f 336 SUPERFAMILY SSF51430 18 334 8.38E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS01985 5e34d226cb6f305cb8843b56011a775f 336 Pfam PF00248 Aldo/keto reductase family 33 334 9.4E-68 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS01985 5e34d226cb6f305cb8843b56011a775f 336 PANTHER PTHR11732:SF191 18 336 2.9E-150 T 22-04-2016 HMPREF9228_RS01985 5e34d226cb6f305cb8843b56011a775f 336 PANTHER PTHR11732 18 336 2.9E-150 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta HMPREF9228_RS01985 5e34d226cb6f305cb8843b56011a775f 336 Gene3D G3DSA:3.20.20.100 18 334 5.9E-82 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS05560 dfa32b922bc893969614762fb203c275 306 Gene3D G3DSA:3.40.50.300 6 232 2.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05560 dfa32b922bc893969614762fb203c275 306 Pfam PF00005 ABC transporter 27 170 1.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS05560 dfa32b922bc893969614762fb203c275 306 SUPERFAMILY SSF52540 11 234 3.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05560 dfa32b922bc893969614762fb203c275 306 PANTHER PTHR24220:SF499 13 228 1.3E-89 T 22-04-2016 HMPREF9228_RS05560 dfa32b922bc893969614762fb203c275 306 SMART SM00382 36 219 9.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05560 dfa32b922bc893969614762fb203c275 306 PANTHER PTHR24220 13 228 1.3E-89 T 22-04-2016 HMPREF9228_RS05455 94af77205025408dd7fcdc2365267f1e 135 SUPERFAMILY SSF54534 17 133 1.28E-32 T 22-04-2016 HMPREF9228_RS05455 94af77205025408dd7fcdc2365267f1e 135 Gene3D G3DSA:3.10.50.40 9 133 1.4E-33 T 22-04-2016 HMPREF9228_RS05455 94af77205025408dd7fcdc2365267f1e 135 PANTHER PTHR10516 25 132 7.9E-29 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type HMPREF9228_RS05455 94af77205025408dd7fcdc2365267f1e 135 PANTHER PTHR10516:SF320 25 132 7.9E-29 T 22-04-2016 HMPREF9228_RS05455 94af77205025408dd7fcdc2365267f1e 135 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 42 132 6.4E-25 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 HMPREF9228_RS03430 d2da2ec92da3e25ebc509351bfdc9e0c 107 Gene3D G3DSA:3.40.50.1110 2 100 1.1E-11 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS03430 d2da2ec92da3e25ebc509351bfdc9e0c 107 SUPERFAMILY SSF52266 2 99 3.0E-11 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain HMPREF9228_RS03430 d2da2ec92da3e25ebc509351bfdc9e0c 107 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 36 95 1.4E-5 T 22-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 HMPREF9228_RS00360 6cf4e9192e3c9e752e12a6262a181f98 326 Pfam PF00892 EamA-like transporter family 184 315 5.7E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS00360 6cf4e9192e3c9e752e12a6262a181f98 326 SUPERFAMILY SSF103481 220 319 7.85E-8 T 22-04-2016 HMPREF9228_RS00360 6cf4e9192e3c9e752e12a6262a181f98 326 PANTHER PTHR12715:SF7 30 326 6.4E-60 T 22-04-2016 HMPREF9228_RS00360 6cf4e9192e3c9e752e12a6262a181f98 326 PANTHER PTHR12715 30 326 6.4E-60 T 22-04-2016 HMPREF9228_RS07570 7a8f71130a94e7a176c818562613cff3 195 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 7 115 17.183 T 22-04-2016 IPR003482 Transcription factor WhiB HMPREF9228_RS07570 7a8f71130a94e7a176c818562613cff3 195 Pfam PF02467 Transcription factor WhiB 51 90 2.8E-7 T 22-04-2016 IPR003482 Transcription factor WhiB HMPREF9228_RS08245 48b4ae0271f5a372a80c720326e540aa 457 SUPERFAMILY SSF103473 11 415 5.23E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS08245 48b4ae0271f5a372a80c720326e540aa 457 Pfam PF07690 Major Facilitator Superfamily 272 413 6.8E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS08245 48b4ae0271f5a372a80c720326e540aa 457 Pfam PF07690 Major Facilitator Superfamily 19 255 1.4E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS08245 48b4ae0271f5a372a80c720326e540aa 457 Gene3D G3DSA:1.20.1250.20 12 201 2.2E-20 T 22-04-2016 HMPREF9228_RS08245 48b4ae0271f5a372a80c720326e540aa 457 Gene3D G3DSA:1.20.1250.20 222 414 6.7E-22 T 22-04-2016 HMPREF9228_RS02620 428759ad39347b951eb93997ceefbdb7 218 PANTHER PTHR38438 46 214 1.3E-25 T 22-04-2016 HMPREF9228_RS02620 428759ad39347b951eb93997ceefbdb7 218 Pfam PF12822 Protein of unknown function (DUF3816) 51 207 2.2E-15 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 HMPREF9228_RS02620 428759ad39347b951eb93997ceefbdb7 218 PANTHER PTHR38438:SF1 46 214 1.3E-25 T 22-04-2016 HMPREF9228_RS03440 f4d87ee3be6423a1b00c2f6f7dd98fb6 420 SUPERFAMILY SSF53649 68 417 1.25E-48 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 HMPREF9228_RS03440 f4d87ee3be6423a1b00c2f6f7dd98fb6 420 Gene3D G3DSA:3.40.720.10 65 345 6.2E-35 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 HMPREF9228_RS03440 f4d87ee3be6423a1b00c2f6f7dd98fb6 420 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 72 378 9.6E-26 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 SUPERFAMILY SSF57716 13 47 1.57E-9 T 22-04-2016 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 SMART SM01086 343 433 2.0E-30 T 22-04-2016 IPR019489 Clp ATPase, C-terminal HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 Pfam PF06689 ClpX C4-type zinc finger 13 49 2.5E-17 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 6 437 5.0E-174 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 SMART SM00994 11 50 7.4E-19 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 PANTHER PTHR11262:SF4 8 450 5.5E-210 T 22-04-2016 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 343 420 1.9E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 441 48.08 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 SMART SM00382 139 296 6.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 Gene3D G3DSA:3.40.50.300 320 336 1.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 Gene3D G3DSA:3.40.50.300 140 282 1.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 Gene3D G3DSA:3.40.50.300 64 108 1.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 SUPERFAMILY SSF52540 62 423 5.14E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 Gene3D G3DSA:1.10.8.60 342 440 7.2E-36 T 22-04-2016 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 Pfam PF07724 AAA domain (Cdc48 subfamily) 140 336 4.5E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 HMPREF9228_RS05095 413ae0639ff7a18ac3839866bc3206e0 453 PANTHER PTHR11262 8 450 5.5E-210 T 22-04-2016 HMPREF9228_RS01150 8c1e8c60bf786e80391a2c3051a2b300 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 4.7E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01150 8c1e8c60bf786e80391a2c3051a2b300 197 PANTHER PTHR30055 5 197 2.1E-18 T 22-04-2016 HMPREF9228_RS01150 8c1e8c60bf786e80391a2c3051a2b300 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01150 8c1e8c60bf786e80391a2c3051a2b300 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01150 8c1e8c60bf786e80391a2c3051a2b300 197 PANTHER PTHR30055:SF66 5 197 2.1E-18 T 22-04-2016 HMPREF9228_RS01150 8c1e8c60bf786e80391a2c3051a2b300 197 SUPERFAMILY SSF48498 85 196 6.3E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal HMPREF9228_RS01150 8c1e8c60bf786e80391a2c3051a2b300 197 SUPERFAMILY SSF46689 11 72 2.64E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS01150 8c1e8c60bf786e80391a2c3051a2b300 197 Gene3D G3DSA:1.10.357.10 10 196 4.6E-26 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS08275 4943c94182ae407914c8693ae6af25e8 221 Gene3D G3DSA:1.25.10.10 62 218 3.2E-12 T 22-04-2016 IPR011989 Armadillo-like helical HMPREF9228_RS08275 4943c94182ae407914c8693ae6af25e8 221 Pfam PF01816 Leucine rich repeat variant 187 210 1.6E-4 T 22-04-2016 IPR004830 Leucine rich repeat variant HMPREF9228_RS08275 4943c94182ae407914c8693ae6af25e8 221 SUPERFAMILY SSF48371 173 217 9.02E-8 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 HMPREF9228_RS08275 4943c94182ae407914c8693ae6af25e8 221 SUPERFAMILY SSF48371 95 145 9.02E-8 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 HMPREF9228_RS02960 99b3cf6cac0e14f1245143e9bdae569a 390 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 204 369 9.9E-33 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02960 99b3cf6cac0e14f1245143e9bdae569a 390 PANTHER PTHR21015:SF22 8 390 2.0E-78 T 22-04-2016 HMPREF9228_RS02960 99b3cf6cac0e14f1245143e9bdae569a 390 PANTHER PTHR21015 8 390 2.0E-78 T 22-04-2016 HMPREF9228_RS02960 99b3cf6cac0e14f1245143e9bdae569a 390 Gene3D G3DSA:3.40.50.2000 6 202 3.8E-54 T 22-04-2016 HMPREF9228_RS02960 99b3cf6cac0e14f1245143e9bdae569a 390 SUPERFAMILY SSF53756 7 389 2.14E-89 T 22-04-2016 HMPREF9228_RS02960 99b3cf6cac0e14f1245143e9bdae569a 390 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 145 7.1E-31 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02960 99b3cf6cac0e14f1245143e9bdae569a 390 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 389 29.27 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS02960 99b3cf6cac0e14f1245143e9bdae569a 390 Gene3D G3DSA:3.40.50.2000 203 346 1.3E-19 T 22-04-2016 HMPREF9228_RS09090 b82070da51ecab8a9451cf82b75cb483 483 SUPERFAMILY SSF51182 6 187 5.34E-54 T 22-04-2016 IPR011051 RmlC-like cupin domain HMPREF9228_RS09090 b82070da51ecab8a9451cf82b75cb483 483 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 10 186 7.0E-94 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 HMPREF9228_RS09090 b82070da51ecab8a9451cf82b75cb483 483 PANTHER PTHR10491 183 482 1.3E-60 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family HMPREF9228_RS09090 b82070da51ecab8a9451cf82b75cb483 483 SUPERFAMILY SSF51735 191 479 1.42E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09090 b82070da51ecab8a9451cf82b75cb483 483 Gene3D G3DSA:3.40.50.720 185 423 5.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09090 b82070da51ecab8a9451cf82b75cb483 483 Pfam PF04321 RmlD substrate binding domain 191 480 6.1E-65 T 22-04-2016 IPR029903 RmlD-like substrate binding domain HMPREF9228_RS09090 b82070da51ecab8a9451cf82b75cb483 483 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 13 183 9.3E-39 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 HMPREF9228_RS09090 b82070da51ecab8a9451cf82b75cb483 483 Gene3D G3DSA:2.60.120.10 8 184 1.2E-52 T 22-04-2016 IPR014710 RmlC-like jelly roll fold HMPREF9228_RS03015 fbcc9752be44a737f20b9b10d4d6a92d 173 PANTHER PTHR22769:SF37 5 147 3.0E-20 T 22-04-2016 HMPREF9228_RS03015 fbcc9752be44a737f20b9b10d4d6a92d 173 SUPERFAMILY SSF55811 12 154 3.52E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS03015 fbcc9752be44a737f20b9b10d4d6a92d 173 Gene3D G3DSA:3.90.79.10 11 157 3.3E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 HMPREF9228_RS03015 fbcc9752be44a737f20b9b10d4d6a92d 173 Pfam PF00293 NUDIX domain 23 140 4.5E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 HMPREF9228_RS03015 fbcc9752be44a737f20b9b10d4d6a92d 173 PANTHER PTHR22769 5 147 3.0E-20 T 22-04-2016 HMPREF9228_RS03015 fbcc9752be44a737f20b9b10d4d6a92d 173 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 HMPREF9228_RS00020 b7cb5fa6496eb6d9e908fbfa9d8f1f3c 156 Pfam PF05258 Protein of unknown function (DUF721) 55 141 3.2E-21 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 HMPREF9228_RS00020 b7cb5fa6496eb6d9e908fbfa9d8f1f3c 156 PANTHER PTHR36456 39 136 9.9E-17 T 22-04-2016 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 SUPERFAMILY SSF81340 11 433 1.44E-94 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 PANTHER PTHR11689:SF96 27 435 7.6E-65 T 22-04-2016 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 PRINTS PR00762 Chloride channel signature 172 191 1.9E-14 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 PRINTS PR00762 Chloride channel signature 89 106 1.9E-14 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 PRINTS PR00762 Chloride channel signature 386 405 1.9E-14 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 SUPERFAMILY SSF116726 447 513 1.31E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 Gene3D G3DSA:1.10.3080.10 21 432 4.5E-81 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 Gene3D G3DSA:3.30.70.1450 453 505 9.5E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 PANTHER PTHR11689 27 435 7.6E-65 T 22-04-2016 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 Pfam PF02080 TrkA-C domain 452 515 9.1E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 HMPREF9228_RS00470 f793a3af57ed3a4aa569e462cef698c2 527 Pfam PF00654 Voltage gated chloride channel 78 418 6.7E-82 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 HMPREF9228_RS02795 1d06b0f698ba399d7c651dcbf4df876a 273 Gene3D G3DSA:3.20.20.140 3 267 3.6E-38 T 22-04-2016 HMPREF9228_RS02795 1d06b0f698ba399d7c651dcbf4df876a 273 Pfam PF04909 Amidohydrolase 5 235 8.1E-15 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 HMPREF9228_RS02795 1d06b0f698ba399d7c651dcbf4df876a 273 SUPERFAMILY SSF51556 4 266 4.17E-26 T 22-04-2016 IPR032466 Metal-dependent hydrolase HMPREF9228_RS02795 1d06b0f698ba399d7c651dcbf4df876a 273 PANTHER PTHR21240 105 246 1.6E-15 T 22-04-2016 HMPREF9228_RS02795 1d06b0f698ba399d7c651dcbf4df876a 273 PANTHER PTHR21240:SF1 105 246 1.6E-15 T 22-04-2016 HMPREF9228_RS05795 ebc6f57afaba43642256ad89648ad4d4 1123 SUPERFAMILY SSF48452 918 1024 1.23E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS05795 ebc6f57afaba43642256ad89648ad4d4 1123 Gene3D G3DSA:1.25.40.10 918 1017 2.0E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS05795 ebc6f57afaba43642256ad89648ad4d4 1123 Gene3D G3DSA:1.25.40.10 855 879 2.0E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS04425 8daa5f97cefee5067cf0062404a6cf22 281 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 275 1.9E-40 T 22-04-2016 IPR000150 Cof protein GO:0016787 HMPREF9228_RS04425 8daa5f97cefee5067cf0062404a6cf22 281 Gene3D G3DSA:3.40.50.1000 2 74 6.7E-41 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04425 8daa5f97cefee5067cf0062404a6cf22 281 Gene3D G3DSA:3.40.50.1000 184 278 6.7E-41 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04425 8daa5f97cefee5067cf0062404a6cf22 281 PANTHER PTHR10000:SF8 6 281 1.0E-39 T 22-04-2016 HMPREF9228_RS04425 8daa5f97cefee5067cf0062404a6cf22 281 ProSitePatterns PS01229 Hypothetical cof family signature 2. 229 251 - T 22-04-2016 HMPREF9228_RS04425 8daa5f97cefee5067cf0062404a6cf22 281 PANTHER PTHR10000 6 281 1.0E-39 T 22-04-2016 HMPREF9228_RS04425 8daa5f97cefee5067cf0062404a6cf22 281 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 274 2.2E-52 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04425 8daa5f97cefee5067cf0062404a6cf22 281 SUPERFAMILY SSF56784 3 277 3.6E-47 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04165 acbd65687e16b5c0133c36df92812721 283 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 278 7.5E-56 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04165 acbd65687e16b5c0133c36df92812721 283 SUPERFAMILY SSF56784 9 281 9.75E-50 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04165 acbd65687e16b5c0133c36df92812721 283 PANTHER PTHR10000:SF8 9 283 9.9E-29 T 22-04-2016 HMPREF9228_RS04165 acbd65687e16b5c0133c36df92812721 283 PANTHER PTHR10000 9 283 9.9E-29 T 22-04-2016 HMPREF9228_RS04165 acbd65687e16b5c0133c36df92812721 283 Gene3D G3DSA:3.40.50.1000 8 85 1.3E-40 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04165 acbd65687e16b5c0133c36df92812721 283 Gene3D G3DSA:3.40.50.1000 187 281 1.3E-40 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04165 acbd65687e16b5c0133c36df92812721 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 251 1.4E-11 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 HMPREF9228_RS07350 934a25919c1dae62c11b2ae897e48517 415 PANTHER PTHR22926:SF3 1 379 4.2E-82 T 22-04-2016 HMPREF9228_RS07350 934a25919c1dae62c11b2ae897e48517 415 PANTHER PTHR22926 1 379 4.2E-82 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS07350 934a25919c1dae62c11b2ae897e48517 415 Pfam PF00953 Glycosyl transferase family 4 80 241 4.8E-37 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 HMPREF9228_RS07575 687ac62097a93761cf2f44935cbcbcab 199 PIRSF PIRSF009320 1 197 3.9E-30 T 22-04-2016 HMPREF9228_RS07575 687ac62097a93761cf2f44935cbcbcab 199 Gene3D G3DSA:3.40.50.300 2 194 8.9E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07575 687ac62097a93761cf2f44935cbcbcab 199 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 148 3.6E-16 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain HMPREF9228_RS07575 687ac62097a93761cf2f44935cbcbcab 199 SUPERFAMILY SSF52540 1 193 1.09E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07360 993a094f45d7e44c15a38023a5ad9fba 234 Pfam PF00005 ABC transporter 18 162 5.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07360 993a094f45d7e44c15a38023a5ad9fba 234 SUPERFAMILY SSF52540 2 232 7.24E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07360 993a094f45d7e44c15a38023a5ad9fba 234 Gene3D G3DSA:3.40.50.300 1 230 2.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07360 993a094f45d7e44c15a38023a5ad9fba 234 PANTHER PTHR24220:SF568 3 233 3.7E-129 T 22-04-2016 HMPREF9228_RS07360 993a094f45d7e44c15a38023a5ad9fba 234 PANTHER PTHR24220 3 233 3.7E-129 T 22-04-2016 HMPREF9228_RS07360 993a094f45d7e44c15a38023a5ad9fba 234 PIRSF PIRSF039137 1 234 3.1E-111 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 HMPREF9228_RS07360 993a094f45d7e44c15a38023a5ad9fba 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS07360 993a094f45d7e44c15a38023a5ad9fba 234 SMART SM00382 26 213 2.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS03450 8a641383ba916b731a74564e315c608c 97 Pfam PF13834 Domain of unknown function (DUF4193) 1 96 1.7E-34 T 22-04-2016 IPR025242 Protein of unknown function DUF4193 HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 Gene3D G3DSA:3.40.50.2300 57 183 7.1E-22 T 22-04-2016 HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 SUPERFAMILY SSF53822 63 327 2.16E-36 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 Pfam PF13377 Periplasmic binding protein-like domain 186 342 2.1E-16 T 22-04-2016 HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 SUPERFAMILY SSF47413 6 63 7.62E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 PANTHER PTHR30146 6 343 1.7E-61 T 22-04-2016 HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 Gene3D G3DSA:1.10.260.40 6 56 2.8E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 SMART SM00354 6 76 4.6E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 2.0E-11 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS09560 2955c1b1ce8068406e02ee656a352ca5 360 Gene3D G3DSA:3.40.50.2300 184 357 5.2E-34 T 22-04-2016 HMPREF9228_RS00105 c2aa3f08e6e9c0cd28aba9d5db2d68eb 378 Pfam PF13191 AAA ATPase domain 17 170 1.6E-9 T 22-04-2016 HMPREF9228_RS00105 c2aa3f08e6e9c0cd28aba9d5db2d68eb 378 SUPERFAMILY SSF52540 4 285 6.89E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00105 c2aa3f08e6e9c0cd28aba9d5db2d68eb 378 Gene3D G3DSA:3.40.50.300 18 216 1.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00840 f285be2c66772a202cc09bf551047301 520 PIRSF PIRSF002741 4 515 1.2E-63 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 HMPREF9228_RS00840 f285be2c66772a202cc09bf551047301 520 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 434 4.5E-73 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain HMPREF9228_RS00840 f285be2c66772a202cc09bf551047301 520 SUPERFAMILY SSF53850 42 506 4.71E-94 T 22-04-2016 HMPREF9228_RS00840 f285be2c66772a202cc09bf551047301 520 Gene3D G3DSA:3.40.190.10 145 286 7.7E-30 T 22-04-2016 HMPREF9228_RS00840 f285be2c66772a202cc09bf551047301 520 Gene3D G3DSA:3.10.105.10 287 489 1.2E-44 T 22-04-2016 HMPREF9228_RS00840 f285be2c66772a202cc09bf551047301 520 PANTHER PTHR30290 1 503 3.3E-83 T 22-04-2016 HMPREF9228_RS02330 010ab5242f72d64d0073817b8e8a5e38 142 Gene3D G3DSA:3.40.930.10 11 141 3.8E-17 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS02330 010ab5242f72d64d0073817b8e8a5e38 142 SUPERFAMILY SSF55804 11 141 1.1E-15 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 HMPREF9228_RS02330 010ab5242f72d64d0073817b8e8a5e38 142 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 141 7.9E-19 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS00080 4d64f0c450dc38808119dd841e380b0a 216 PANTHER PTHR30399 1 210 7.4E-27 T 22-04-2016 HMPREF9228_RS00080 4d64f0c450dc38808119dd841e380b0a 216 Pfam PF01863 Protein of unknown function DUF45 11 212 6.1E-44 T 22-04-2016 IPR002725 Protein of unknown function DUF45 HMPREF9228_RS04260 7e218c9ed5e13bd2c7cb20f3fff002af 373 SUPERFAMILY SSF53474 92 243 3.57E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04260 7e218c9ed5e13bd2c7cb20f3fff002af 373 Pfam PF11187 Protein of unknown function (DUF2974) 88 314 2.4E-91 T 22-04-2016 IPR024499 Protein of unknown function DUF2974 HMPREF9228_RS04260 7e218c9ed5e13bd2c7cb20f3fff002af 373 Gene3D G3DSA:3.40.50.1820 107 215 3.0E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04260 7e218c9ed5e13bd2c7cb20f3fff002af 373 Gene3D G3DSA:3.40.50.1820 28 48 3.0E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS00480 4b62f9f7f64ddaaa8989f354c705b961 131 PANTHER PTHR28259 3 126 6.8E-20 T 22-04-2016 HMPREF9228_RS00480 4b62f9f7f64ddaaa8989f354c705b961 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 121 7.8E-19 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 HMPREF9228_RS00480 4b62f9f7f64ddaaa8989f354c705b961 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 2 126 16.325 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 HMPREF9228_RS01730 ef8f3543e4fb7a90e64144d41eb896c3 407 PANTHER PTHR33295 5 405 4.7E-116 T 22-04-2016 HMPREF9228_RS01730 ef8f3543e4fb7a90e64144d41eb896c3 407 Gene3D G3DSA:3.40.50.300 5 147 6.7E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01730 ef8f3543e4fb7a90e64144d41eb896c3 407 SUPERFAMILY SSF52540 5 183 5.7E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS01730 ef8f3543e4fb7a90e64144d41eb896c3 407 Pfam PF13173 AAA domain 22 153 3.9E-34 T 22-04-2016 HMPREF9228_RS01730 ef8f3543e4fb7a90e64144d41eb896c3 407 PANTHER PTHR33295:SF8 5 405 4.7E-116 T 22-04-2016 HMPREF9228_RS00555 c279f98bb645d9b4abaf818b5ce59ea5 734 Pfam PF02446 4-alpha-glucanotransferase 193 703 2.6E-105 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 HMPREF9228_RS00555 c279f98bb645d9b4abaf818b5ce59ea5 734 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 147 708 8.7E-98 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 HMPREF9228_RS00555 c279f98bb645d9b4abaf818b5ce59ea5 734 Gene3D G3DSA:3.20.20.80 652 712 8.6E-142 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00555 c279f98bb645d9b4abaf818b5ce59ea5 734 Gene3D G3DSA:3.20.20.80 185 617 8.6E-142 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 HMPREF9228_RS00555 c279f98bb645d9b4abaf818b5ce59ea5 734 PANTHER PTHR32438 151 730 3.3E-119 T 22-04-2016 HMPREF9228_RS00555 c279f98bb645d9b4abaf818b5ce59ea5 734 SUPERFAMILY SSF51445 648 715 4.42E-126 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00555 c279f98bb645d9b4abaf818b5ce59ea5 734 SUPERFAMILY SSF51445 187 614 4.42E-126 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily HMPREF9228_RS00555 c279f98bb645d9b4abaf818b5ce59ea5 734 PANTHER PTHR32438:SF5 151 730 3.3E-119 T 22-04-2016 HMPREF9228_RS04975 190a29d3362e78333b2d561f3b20a7b5 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 229 2.5E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04975 190a29d3362e78333b2d561f3b20a7b5 235 SUPERFAMILY SSF161098 23 215 2.62E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04975 190a29d3362e78333b2d561f3b20a7b5 235 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 119 1.1E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 HMPREF9228_RS04975 190a29d3362e78333b2d561f3b20a7b5 235 PANTHER PTHR30614 16 235 7.6E-54 T 22-04-2016 HMPREF9228_RS04975 190a29d3362e78333b2d561f3b20a7b5 235 Gene3D G3DSA:1.10.3720.10 20 231 1.7E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS04540 cb5da673bf1f9a9ab00a5c6496c19a39 183 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 153 21.674 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 HMPREF9228_RS04540 cb5da673bf1f9a9ab00a5c6496c19a39 183 SUPERFAMILY SSF55486 3 143 8.06E-38 T 22-04-2016 HMPREF9228_RS04540 cb5da673bf1f9a9ab00a5c6496c19a39 183 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 115 125 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site HMPREF9228_RS04540 cb5da673bf1f9a9ab00a5c6496c19a39 183 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 143 1.5E-31 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 HMPREF9228_RS04540 cb5da673bf1f9a9ab00a5c6496c19a39 183 Pfam PF02130 Uncharacterized protein family UPF0054 26 143 1.1E-34 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 HMPREF9228_RS04540 cb5da673bf1f9a9ab00a5c6496c19a39 183 Gene3D G3DSA:3.40.390.30 6 145 1.2E-38 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 HMPREF9228_RS04540 cb5da673bf1f9a9ab00a5c6496c19a39 183 PANTHER PTHR22881 24 142 4.8E-39 T 22-04-2016 HMPREF9228_RS01875 7182816160965361ad1643f9d2abe310 708 SUPERFAMILY SSF48208 384 610 3.74E-8 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 HMPREF9228_RS04855 d61c25c4d4912a0e017f5012d0620822 193 SUPERFAMILY SSF56784 3 184 2.11E-7 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04855 d61c25c4d4912a0e017f5012d0620822 193 Gene3D G3DSA:3.40.50.1000 104 185 7.1E-6 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS04855 d61c25c4d4912a0e017f5012d0620822 193 Pfam PF12710 haloacid dehalogenase-like hydrolase 3 174 5.2E-12 T 22-04-2016 HMPREF9228_RS06375 b329c28498ace0cd2ece27b3f6295de0 375 PANTHER PTHR34184 62 373 1.9E-46 T 22-04-2016 HMPREF9228_RS06375 b329c28498ace0cd2ece27b3f6295de0 375 Pfam PF03773 Predicted permease 61 370 3.0E-49 T 22-04-2016 IPR005524 Predicted permease DUF318 HMPREF9228_RS06375 b329c28498ace0cd2ece27b3f6295de0 375 PANTHER PTHR34184:SF1 62 373 1.9E-46 T 22-04-2016 HMPREF9228_RS03790 a7b5c1f346e153bc2d3792fe73dd113d 117 PANTHER PTHR36849 1 117 3.6E-49 T 22-04-2016 HMPREF9228_RS03790 a7b5c1f346e153bc2d3792fe73dd113d 117 Pfam PF04343 Protein of unknown function, DUF488 5 112 9.2E-33 T 22-04-2016 IPR007438 Protein of unknown function DUF488 HMPREF9228_RS03790 a7b5c1f346e153bc2d3792fe73dd113d 117 PANTHER PTHR36849:SF1 1 117 3.6E-49 T 22-04-2016 HMPREF9228_RS05850 d4a4aabe362b829ac5c247af938583e8 532 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 47 79 8.9E-7 T 22-04-2016 IPR019933 DivIVA domain HMPREF9228_RS05850 d4a4aabe362b829ac5c247af938583e8 532 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 168 199 7.2E-6 T 22-04-2016 IPR019933 DivIVA domain HMPREF9228_RS05850 d4a4aabe362b829ac5c247af938583e8 532 TIGRFAM TIGR03543 divI1A_rptt_fam: DivIVA domain repeat protein 14 205 7.2E-72 T 22-04-2016 IPR019932 Conserved hypothetical protein CHP03543 HMPREF9228_RS07715 9e5075b67e98badbaac3d99eb323774b 204 Pfam PF13830 Domain of unknown function (DUF4192) 13 200 6.7E-7 T 22-04-2016 IPR025447 Protein of unknown function DUF4192 HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 SUPERFAMILY SSF54171 21 90 1.9E-26 T 22-04-2016 IPR016177 DNA-binding domain GO:0003677 HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 Gene3D G3DSA:1.10.150.130 111 190 1.8E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 PANTHER PTHR30349 101 413 1.4E-44 T 22-04-2016 HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 Gene3D G3DSA:1.10.443.10 203 412 1.5E-41 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 PANTHER PTHR30349:SF20 101 413 1.4E-44 T 22-04-2016 HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 SUPERFAMILY SSF56349 104 405 2.12E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 Pfam PF00589 Phage integrase family 207 400 1.4E-43 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 Pfam PF02920 DNA binding domain of tn916 integrase 20 87 6.2E-25 T 22-04-2016 HMPREF9228_RS00710 183cc8ba79482ddbef9d16d9e7ce6ca4 414 Gene3D G3DSA:3.30.160.60 21 88 8.2E-34 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 HMPREF9228_RS06615 a130bc65d40558b9ddfeaa7311f4bf66 448 Gene3D G3DSA:3.40.190.10 42 149 4.2E-17 T 22-04-2016 HMPREF9228_RS06615 a130bc65d40558b9ddfeaa7311f4bf66 448 Pfam PF13416 Bacterial extracellular solute-binding protein 55 366 1.5E-33 T 22-04-2016 HMPREF9228_RS06615 a130bc65d40558b9ddfeaa7311f4bf66 448 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 145 162 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 HMPREF9228_RS06615 a130bc65d40558b9ddfeaa7311f4bf66 448 PANTHER PTHR30061 16 447 8.1E-87 T 22-04-2016 HMPREF9228_RS06615 a130bc65d40558b9ddfeaa7311f4bf66 448 SUPERFAMILY SSF53850 23 444 1.81E-65 T 22-04-2016 HMPREF9228_RS06615 a130bc65d40558b9ddfeaa7311f4bf66 448 PANTHER PTHR30061:SF25 16 447 8.1E-87 T 22-04-2016 HMPREF9228_RS06615 a130bc65d40558b9ddfeaa7311f4bf66 448 Gene3D G3DSA:3.40.190.10 151 358 2.6E-35 T 22-04-2016 HMPREF9228_RS00920 8b617013db46aa02c157540e30af005d 383 SMART SM00382 28 168 2.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS00920 8b617013db46aa02c157540e30af005d 383 Gene3D G3DSA:3.40.50.300 4 166 2.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00920 8b617013db46aa02c157540e30af005d 383 SUPERFAMILY SSF52540 4 206 5.49E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS00920 8b617013db46aa02c157540e30af005d 383 PANTHER PTHR11669 4 202 2.3E-43 T 22-04-2016 HMPREF9228_RS00920 8b617013db46aa02c157540e30af005d 383 PANTHER PTHR11669:SF8 4 202 2.3E-43 T 22-04-2016 HMPREF9228_RS00920 8b617013db46aa02c157540e30af005d 383 Pfam PF13177 DNA polymerase III, delta subunit 9 166 2.4E-34 T 22-04-2016 HMPREF9228_RS09750 a215649cb1b1c06ca0801e2053929c60 221 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 23 218 6.1E-35 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 HMPREF9228_RS09750 a215649cb1b1c06ca0801e2053929c60 221 SUPERFAMILY SSF53335 20 217 1.15E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS09750 a215649cb1b1c06ca0801e2053929c60 221 Gene3D G3DSA:3.40.50.150 18 220 5.2E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS09750 a215649cb1b1c06ca0801e2053929c60 221 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 11 218 22.756 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 HMPREF9228_RS09750 a215649cb1b1c06ca0801e2053929c60 221 PANTHER PTHR31760 21 220 1.4E-53 T 22-04-2016 HMPREF9228_RS09750 a215649cb1b1c06ca0801e2053929c60 221 PIRSF PIRSF003078 5 221 7.2E-42 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 HMPREF9228_RS09750 a215649cb1b1c06ca0801e2053929c60 221 PANTHER PTHR31760:SF0 21 220 1.4E-53 T 22-04-2016 HMPREF9228_RS09750 a215649cb1b1c06ca0801e2053929c60 221 Pfam PF02527 rRNA small subunit methyltransferase G 21 195 2.5E-41 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 Pfam PF02934 GatB/GatE catalytic domain 17 312 1.0E-97 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 Gene3D G3DSA:1.10.10.410 443 497 5.6E-7 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 PANTHER PTHR11659:SF0 7 498 1.1E-194 T 22-04-2016 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 SUPERFAMILY SSF55931 17 319 4.84E-104 T 22-04-2016 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 SMART SM00845 350 497 3.3E-52 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 14 498 34.053 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 14 496 4.5E-139 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 PANTHER PTHR11659 7 498 1.1E-194 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 Pfam PF02637 GatB domain 350 497 2.0E-40 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 163 177 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 HMPREF9228_RS01420 43fdf7555fe3fbf9a0ca07d34cea8c26 499 SUPERFAMILY SSF89095 349 497 6.28E-25 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 HMPREF9228_RS08240 b01b0a189fc025262b842c152925e35f 132 SUPERFAMILY SSF54593 2 131 1.75E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase HMPREF9228_RS08240 b01b0a189fc025262b842c152925e35f 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 101 1.4E-8 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain HMPREF9228_RS08240 b01b0a189fc025262b842c152925e35f 132 Gene3D G3DSA:3.10.180.10 11 130 5.4E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase HMPREF9228_RS06380 a70971694441af996c860f0b6ecaf1c2 251 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 29 244 2.9E-39 T 22-04-2016 IPR015402 Protein of unknown function DUF1980 HMPREF9228_RS00950 707a4d0e758cbb0634bb3b0d2eb72d9e 533 PANTHER PTHR12994 116 462 4.2E-52 T 22-04-2016 HMPREF9228_RS00950 707a4d0e758cbb0634bb3b0d2eb72d9e 533 PANTHER PTHR12994 1 100 4.2E-52 T 22-04-2016 HMPREF9228_RS00950 707a4d0e758cbb0634bb3b0d2eb72d9e 533 Pfam PF03577 Peptidase family C69 2 427 6.2E-191 T 22-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 HMPREF9228_RS00950 707a4d0e758cbb0634bb3b0d2eb72d9e 533 PANTHER PTHR12994:SF17 116 462 4.2E-52 T 22-04-2016 HMPREF9228_RS00950 707a4d0e758cbb0634bb3b0d2eb72d9e 533 PANTHER PTHR12994:SF17 1 100 4.2E-52 T 22-04-2016 HMPREF9228_RS00790 236dccfdb538e9b3a14b9e1e7797b263 308 SUPERFAMILY SSF161098 46 288 2.99E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS00790 236dccfdb538e9b3a14b9e1e7797b263 308 Gene3D G3DSA:1.10.3720.10 54 297 9.6E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 SUPERFAMILY SSF52972 1 147 6.8E-38 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 Gene3D G3DSA:3.90.950.10 174 255 2.4E-78 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 Gene3D G3DSA:3.90.950.10 1 133 2.4E-78 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 PANTHER PTHR11067:SF9 1 145 1.9E-52 T 22-04-2016 HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 PANTHER PTHR11067:SF9 184 248 1.9E-52 T 22-04-2016 HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 PANTHER PTHR11067 1 145 1.9E-52 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 PANTHER PTHR11067 184 248 1.9E-52 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 Pfam PF01725 Ham1 family 3 248 1.0E-51 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 SUPERFAMILY SSF52972 177 251 7.59E-17 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like HMPREF9228_RS02010 7a4316bec6ddc6577c35624f01cba016 257 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 253 47.298 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 HMPREF9228_RS09420 9df3b5f41b7e2fa4231977ac6e0492e2 251 Gene3D G3DSA:3.30.1600.10 112 167 1.8E-21 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain HMPREF9228_RS09420 9df3b5f41b7e2fa4231977ac6e0492e2 251 Gene3D G3DSA:3.30.1600.10 21 60 1.8E-21 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain HMPREF9228_RS09420 9df3b5f41b7e2fa4231977ac6e0492e2 251 Gene3D G3DSA:3.40.50.1220 174 246 5.4E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain HMPREF9228_RS09420 9df3b5f41b7e2fa4231977ac6e0492e2 251 Gene3D G3DSA:3.40.50.1220 3 20 5.4E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain HMPREF9228_RS09420 9df3b5f41b7e2fa4231977ac6e0492e2 251 Gene3D G3DSA:3.40.50.1220 72 111 5.4E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain HMPREF9228_RS09420 9df3b5f41b7e2fa4231977ac6e0492e2 251 PANTHER PTHR11085 3 245 2.0E-68 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 HMPREF9228_RS09420 9df3b5f41b7e2fa4231977ac6e0492e2 251 SUPERFAMILY SSF52467 3 246 1.82E-70 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain HMPREF9228_RS09420 9df3b5f41b7e2fa4231977ac6e0492e2 251 Pfam PF02146 Sir2 family 10 198 2.9E-44 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 Pfam PF00117 Glutamine amidotransferase class-I 313 545 6.7E-49 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 SUPERFAMILY SSF52317 300 551 3.64E-73 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 SUPERFAMILY SSF52540 14 278 8.44E-116 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 Gene3D G3DSA:3.40.50.300 8 296 9.2E-130 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 TIGRFAM TIGR00337 PyrG: CTP synthase 13 545 6.9E-231 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 Pfam PF06418 CTP synthase N-terminus 15 278 5.2E-120 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 Gene3D G3DSA:3.40.50.880 299 551 1.3E-90 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 PANTHER PTHR11550 7 552 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 HMPREF9228_RS04610 d6f9000e1d025beba5ed54768ee7efc9 554 Hamap MF_01227 CTP synthase [pyrG]. 14 550 49.469 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 HMPREF9228_RS06985 392bb3427eee426095b6f3a0ff886ad8 343 PANTHER PTHR34353 7 343 2.2E-94 T 22-04-2016 HMPREF9228_RS06985 392bb3427eee426095b6f3a0ff886ad8 343 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 3 342 1.3E-137 T 22-04-2016 IPR019856 CRISPR-associated protein Cas1, DVULG subtype HMPREF9228_RS06985 392bb3427eee426095b6f3a0ff886ad8 343 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 7 340 22.247 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 HMPREF9228_RS06985 392bb3427eee426095b6f3a0ff886ad8 343 Pfam PF01867 CRISPR associated protein Cas1 8 298 7.6E-103 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 HMPREF9228_RS06985 392bb3427eee426095b6f3a0ff886ad8 343 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 338 5.6E-83 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 HMPREF9228_RS06985 392bb3427eee426095b6f3a0ff886ad8 343 PANTHER PTHR34353:SF2 7 343 2.2E-94 T 22-04-2016 HMPREF9228_RS09200 3c272348e4bb92fc2163433afffb15cf 415 PANTHER PTHR30061 3 414 2.2E-51 T 22-04-2016 HMPREF9228_RS09200 3c272348e4bb92fc2163433afffb15cf 415 Pfam PF13416 Bacterial extracellular solute-binding protein 51 336 5.4E-38 T 22-04-2016 HMPREF9228_RS09200 3c272348e4bb92fc2163433afffb15cf 415 SUPERFAMILY SSF53850 24 413 1.33E-64 T 22-04-2016 HMPREF9228_RS09200 3c272348e4bb92fc2163433afffb15cf 415 Gene3D G3DSA:3.40.190.10 144 315 2.3E-25 T 22-04-2016 HMPREF9228_RS09200 3c272348e4bb92fc2163433afffb15cf 415 Gene3D G3DSA:3.40.190.10 316 343 2.1E-26 T 22-04-2016 HMPREF9228_RS09200 3c272348e4bb92fc2163433afffb15cf 415 Gene3D G3DSA:3.40.190.10 8 138 2.1E-26 T 22-04-2016 HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 Pfam PF10150 Ribonuclease E/G family 668 944 1.5E-97 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 PANTHER PTHR30001:SF0 251 445 3.9E-213 T 22-04-2016 HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 PANTHER PTHR30001:SF0 467 974 3.9E-213 T 22-04-2016 HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 564 971 6.9E-144 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 SUPERFAMILY SSF50249 589 672 9.94E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 SMART SM00316 587 666 2.6E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 PANTHER PTHR30001 251 445 3.9E-213 T 22-04-2016 HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 PANTHER PTHR30001 467 974 3.9E-213 T 22-04-2016 HMPREF9228_RS08760 9a2e9339d7709c46c7385b82faac8fe9 1031 Gene3D G3DSA:2.40.50.140 583 672 3.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS01310 572f8f63daf3009928fdda0977ef86ca 371 Pfam PF00872 Transposase, Mutator family 99 203 1.9E-8 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 HMPREF9228_RS04605 64791f5e779e958f271d0b4f4eb5f2f0 542 Gene3D G3DSA:2.40.440.10 396 540 4.1E-15 T 22-04-2016 HMPREF9228_RS04605 64791f5e779e958f271d0b4f4eb5f2f0 542 Pfam PF03734 L,D-transpeptidase catalytic domain 401 540 1.5E-15 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 HMPREF9228_RS04605 64791f5e779e958f271d0b4f4eb5f2f0 542 SUPERFAMILY SSF141523 400 540 3.4E-19 T 22-04-2016 HMPREF9228_RS08820 09c017cbf8a71b792ba107113c915459 169 SUPERFAMILY SSF55729 58 160 5.21E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS08820 09c017cbf8a71b792ba107113c915459 169 Gene3D G3DSA:3.40.630.30 60 159 1.7E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase HMPREF9228_RS08820 09c017cbf8a71b792ba107113c915459 169 PANTHER PTHR36449 1 151 2.0E-28 T 22-04-2016 HMPREF9228_RS07040 32e6690302312da3928d684b9f7b6108 329 PANTHER PTHR32196 20 325 4.7E-104 T 22-04-2016 HMPREF9228_RS07040 32e6690302312da3928d684b9f7b6108 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 317 2.8E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS07040 32e6690302312da3928d684b9f7b6108 329 PANTHER PTHR32196:SF21 20 325 4.7E-104 T 22-04-2016 HMPREF9228_RS09625 2d98212813849662edb8283150c0fe77 440 Pfam PF14501 GHKL domain 333 439 7.1E-30 T 22-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain HMPREF9228_RS09625 2d98212813849662edb8283150c0fe77 440 SUPERFAMILY SSF55874 299 439 1.18E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS09625 2d98212813849662edb8283150c0fe77 440 Gene3D G3DSA:3.30.565.10 303 439 3.8E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS00610 93c3ce7a51333f215c2ef6e8c0e600c9 195 SUPERFAMILY SSF46955 41 122 2.88E-17 T 22-04-2016 IPR009061 Putative DNA-binding domain HMPREF9228_RS00610 93c3ce7a51333f215c2ef6e8c0e600c9 195 PANTHER PTHR30204 35 148 1.6E-22 T 22-04-2016 HMPREF9228_RS00610 93c3ce7a51333f215c2ef6e8c0e600c9 195 Pfam PF13411 MerR HTH family regulatory protein 41 107 3.0E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS00610 93c3ce7a51333f215c2ef6e8c0e600c9 195 Gene3D G3DSA:1.10.1660.10 41 125 1.5E-19 T 22-04-2016 HMPREF9228_RS00610 93c3ce7a51333f215c2ef6e8c0e600c9 195 SMART SM00422 41 110 4.0E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS00610 93c3ce7a51333f215c2ef6e8c0e600c9 195 PANTHER PTHR30204:SF8 35 148 1.6E-22 T 22-04-2016 HMPREF9228_RS02160 c79f646bf46746f290e7fbbe101c3eba 151 PANTHER PTHR10948 1 143 2.7E-29 T 22-04-2016 HMPREF9228_RS02160 c79f646bf46746f290e7fbbe101c3eba 151 Gene3D G3DSA:3.30.420.10 60 131 2.3E-6 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS02160 c79f646bf46746f290e7fbbe101c3eba 151 SUPERFAMILY SSF53098 3 131 2.58E-16 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 SMART SM00829 13 328 4.3E-11 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 SUPERFAMILY SSF50129 8 164 2.44E-26 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 PANTHER PTHR11695:SF605 18 330 5.7E-78 T 22-04-2016 HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 Gene3D G3DSA:3.40.50.720 171 276 1.4E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 PANTHER PTHR11695 18 330 5.7E-78 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 Pfam PF00107 Zinc-binding dehydrogenase 175 292 2.1E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 Gene3D G3DSA:3.90.180.10 1 170 4.3E-28 T 22-04-2016 IPR011032 GroES-like HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 129 8.4E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 HMPREF9228_RS06430 001cc48b6e53683d2246681e0f4cced2 330 SUPERFAMILY SSF51735 140 300 5.38E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS09500 6c3427795bde87757a3d28483562378f 71 SUPERFAMILY SSF53822 13 67 1.69E-6 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS09500 6c3427795bde87757a3d28483562378f 71 Gene3D G3DSA:3.40.50.2300 13 67 4.4E-7 T 22-04-2016 HMPREF9228_RS09500 6c3427795bde87757a3d28483562378f 71 Pfam PF13377 Periplasmic binding protein-like domain 13 66 2.5E-6 T 22-04-2016 HMPREF9228_RS02355 215a560ce52e55e6a878c8e0cc05534e 554 PANTHER PTHR42307 1 482 3.9E-85 T 22-04-2016 HMPREF9228_RS02355 215a560ce52e55e6a878c8e0cc05534e 554 PANTHER PTHR42307:SF2 1 482 3.9E-85 T 22-04-2016 HMPREF9228_RS02355 215a560ce52e55e6a878c8e0cc05534e 554 Pfam PF03136 Pup-ligase protein 5 485 4.2E-150 T 22-04-2016 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 UniPathway: UPA00997|UniPathway: UPA00998 HMPREF9228_RS02355 215a560ce52e55e6a878c8e0cc05534e 554 PIRSF PIRSF018077 10 548 2.2E-182 T 22-04-2016 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 UniPathway: UPA00997|UniPathway: UPA00998 HMPREF9228_RS02355 215a560ce52e55e6a878c8e0cc05534e 554 TIGRFAM TIGR03688 pupylate_PafA2: proteasome accessory factor PafA2 4 537 3.5E-203 T 22-04-2016 IPR022366 Pup deamidase GO:0008233|GO:0016811 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00997 HMPREF9228_RS06890 101a3e92cb2894ba1b91557ac7314eca 458 Gene3D G3DSA:2.60.120.200 152 239 5.9E-4 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain HMPREF9228_RS07930 36e4d959f3ec9048867ae3b4edb9a59c 316 Gene3D G3DSA:1.10.3720.10 34 303 6.3E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS07930 36e4d959f3ec9048867ae3b4edb9a59c 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 305 2.9E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS07930 36e4d959f3ec9048867ae3b4edb9a59c 316 PANTHER PTHR32243:SF28 31 316 4.6E-83 T 22-04-2016 HMPREF9228_RS07930 36e4d959f3ec9048867ae3b4edb9a59c 316 SUPERFAMILY SSF161098 37 316 4.45E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS07930 36e4d959f3ec9048867ae3b4edb9a59c 316 PANTHER PTHR32243 31 316 4.6E-83 T 22-04-2016 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 SUPERFAMILY SSF52540 29 278 6.21E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 613 675 4.3E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 259 324 3.5E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 Gene3D G3DSA:3.40.50.300 25 283 9.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 PANTHER PTHR24220:SF132 410 521 1.0E-152 T 22-04-2016 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 PANTHER PTHR24220:SF132 31 313 1.0E-152 T 22-04-2016 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 259 345 1.6E-21 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 611 711 4.7E-21 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 SMART SM00382 419 611 5.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 SMART SM00382 58 257 1.5E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 PANTHER PTHR24220 410 521 1.0E-152 T 22-04-2016 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 PANTHER PTHR24220 31 313 1.0E-152 T 22-04-2016 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 ProSitePatterns PS00211 ABC transporters family signature. 180 194 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 ProSitePatterns PS00211 ABC transporters family signature. 534 548 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 Pfam PF00005 ABC transporter 411 561 3.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 Pfam PF00005 ABC transporter 50 207 7.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 Gene3D G3DSA:3.40.50.300 377 642 1.1E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09245 ac3db72e55d4f656a18cbdc9e5929764 712 SUPERFAMILY SSF52540 383 633 3.15E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 PRINTS PR00070 Dihydrofolate reductase signature 67 75 5.0E-16 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 PRINTS PR00070 Dihydrofolate reductase signature 53 63 5.0E-16 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 PRINTS PR00070 Dihydrofolate reductase signature 143 157 5.0E-16 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 PRINTS PR00070 Dihydrofolate reductase signature 80 91 5.0E-16 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 PANTHER PTHR22778 36 220 3.8E-34 T 22-04-2016 HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 Pfam PF00186 Dihydrofolate reductase 37 182 1.6E-41 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 Gene3D G3DSA:3.40.430.10 31 218 1.7E-53 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 SUPERFAMILY SSF53597 37 182 1.23E-48 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain HMPREF9228_RS07800 1006e4fed2a1f4f3e6e80ce799300e43 220 PANTHER PTHR22778:SF16 36 220 3.8E-34 T 22-04-2016 HMPREF9228_RS00800 c5c5d88e10fe3861cb6842d4c8c92143 275 Gene3D G3DSA:3.40.720.10 3 229 9.4E-37 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 HMPREF9228_RS00800 c5c5d88e10fe3861cb6842d4c8c92143 275 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 223 1.1E-27 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 HMPREF9228_RS00800 c5c5d88e10fe3861cb6842d4c8c92143 275 SUPERFAMILY SSF53649 1 233 4.19E-37 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 HMPREF9228_RS05365 f350168df31c6e3179b28ad311f2ab45 169 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 49 64 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05365 f350168df31c6e3179b28ad311f2ab45 169 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 167 1.2E-35 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05365 f350168df31c6e3179b28ad311f2ab45 169 SUPERFAMILY SSF69765 1 168 1.31E-40 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05365 f350168df31c6e3179b28ad311f2ab45 169 Pfam PF02542 YgbB family 2 167 3.4E-43 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05365 f350168df31c6e3179b28ad311f2ab45 169 Gene3D G3DSA:3.30.1330.50 1 168 5.1E-51 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS05365 f350168df31c6e3179b28ad311f2ab45 169 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 168 30.047 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 SUPERFAMILY SSF46785 159 236 1.86E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 SMART SM00419 181 229 2.1E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 Pfam PF13545 Crp-like helix-turn-helix domain 162 235 3.3E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 SUPERFAMILY SSF51206 15 157 4.32E-32 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 PANTHER PTHR24567 9 237 1.7E-49 T 22-04-2016 HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 SMART SM00100 21 142 5.4E-20 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 Gene3D G3DSA:2.60.120.10 13 156 4.4E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 Pfam PF00027 Cyclic nucleotide-binding domain 42 124 6.7E-18 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain HMPREF9228_RS06835 6592695fb8817f056d1abc85e80e3ebd 239 Gene3D G3DSA:1.10.10.10 158 236 5.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS05410 210cc43680682bb83bf4136851d6635c 1030 SUPERFAMILY SSF53448 42 267 1.85E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS05410 210cc43680682bb83bf4136851d6635c 1030 Pfam PF13632 Glycosyl transferase family group 2 134 337 1.7E-6 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS05410 210cc43680682bb83bf4136851d6635c 1030 Gene3D G3DSA:3.90.550.10 36 265 2.7E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS06545 1858abccbcdf2deaf673c995f2a4e39a 485 Pfam PF13520 Amino acid permease 25 441 7.4E-61 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS06545 1858abccbcdf2deaf673c995f2a4e39a 485 PIRSF PIRSF006060 4 484 6.0E-89 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS06545 1858abccbcdf2deaf673c995f2a4e39a 485 PANTHER PTHR11785 2 469 9.1E-179 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 HMPREF9228_RS06545 1858abccbcdf2deaf673c995f2a4e39a 485 PANTHER PTHR11785:SF405 2 469 9.1E-179 T 22-04-2016 HMPREF9228_RS04790 05393a0de2f6fda2c27eeb4bcbc673f1 492 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 319 418 2.3E-25 T 22-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain HMPREF9228_RS04790 05393a0de2f6fda2c27eeb4bcbc673f1 492 Pfam PF04326 Putative DNA-binding domain 23 141 6.3E-10 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 HMPREF9228_RS04790 05393a0de2f6fda2c27eeb4bcbc673f1 492 Gene3D G3DSA:1.10.10.10 435 486 2.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04790 05393a0de2f6fda2c27eeb4bcbc673f1 492 SUPERFAMILY SSF46785 435 490 1.87E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS04790 05393a0de2f6fda2c27eeb4bcbc673f1 492 PANTHER PTHR30595:SF6 1 339 1.9E-21 T 22-04-2016 HMPREF9228_RS04790 05393a0de2f6fda2c27eeb4bcbc673f1 492 PANTHER PTHR30595 1 339 1.9E-21 T 22-04-2016 HMPREF9228_RS06160 70afdfbe87ce90bbd029e614dd6989dd 121 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 120 17.478 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 HMPREF9228_RS06160 70afdfbe87ce90bbd029e614dd6989dd 121 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 118 1.1E-19 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 HMPREF9228_RS06160 70afdfbe87ce90bbd029e614dd6989dd 121 PANTHER PTHR28259 7 121 6.6E-23 T 22-04-2016 HMPREF9228_RS06015 0de4551c70a8c6ddf5458370aff33562 90 Gene3D G3DSA:2.60.120.10 14 75 4.5E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold HMPREF9228_RS06015 0de4551c70a8c6ddf5458370aff33562 90 SUPERFAMILY SSF51182 13 76 8.0E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain HMPREF9228_RS02075 db4cc785c2b9263037bb8d5e6fea7189 67 Pfam PF00083 Sugar (and other) transporter 2 45 9.6E-8 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 HMPREF9228_RS02075 db4cc785c2b9263037bb8d5e6fea7189 67 SUPERFAMILY SSF103473 2 48 7.46E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS02190 4b636adbac659a1813272256aa67c1e1 223 Pfam PF04230 Polysaccharide pyruvyl transferase 13 160 8.3E-18 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase HMPREF9228_RS05620 6677513326baf665d296cb8e3ee5e29e 235 PANTHER PTHR40076 79 231 2.9E-17 T 22-04-2016 HMPREF9228_RS05620 6677513326baf665d296cb8e3ee5e29e 235 PANTHER PTHR40076:SF1 79 231 2.9E-17 T 22-04-2016 HMPREF9228_RS05620 6677513326baf665d296cb8e3ee5e29e 235 Pfam PF06161 Protein of unknown function (DUF975) 60 222 3.1E-14 T 22-04-2016 IPR010380 Protein of unknown function DUF975 HMPREF9228_RS09505 bc1d146b423d063e24753cd874dfd4a4 170 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 8.7E-39 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS09505 bc1d146b423d063e24753cd874dfd4a4 170 PANTHER PTHR30175:SF5 23 118 5.8E-31 T 22-04-2016 HMPREF9228_RS09505 bc1d146b423d063e24753cd874dfd4a4 170 SUPERFAMILY SSF51261 21 164 1.38E-46 T 22-04-2016 IPR011055 Duplicated hybrid motif HMPREF9228_RS09505 bc1d146b423d063e24753cd874dfd4a4 170 Gene3D G3DSA:2.70.70.10 21 166 4.5E-50 T 22-04-2016 HMPREF9228_RS09505 bc1d146b423d063e24753cd874dfd4a4 170 PANTHER PTHR30175 23 118 5.8E-31 T 22-04-2016 HMPREF9228_RS09505 bc1d146b423d063e24753cd874dfd4a4 170 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 144 3.9E-44 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS09505 bc1d146b423d063e24753cd874dfd4a4 170 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- HMPREF9228_RS03605 9aedf013d777d8d64578c61d4e9f0844 188 SUPERFAMILY SSF52540 25 76 1.77E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03605 9aedf013d777d8d64578c61d4e9f0844 188 Gene3D G3DSA:3.40.50.300 4 184 5.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03605 9aedf013d777d8d64578c61d4e9f0844 188 PANTHER PTHR33540 1 149 2.0E-29 T 22-04-2016 HMPREF9228_RS03605 9aedf013d777d8d64578c61d4e9f0844 188 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 149 8.1E-28 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 HMPREF9228_RS03605 9aedf013d777d8d64578c61d4e9f0844 188 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 150 2.4E-21 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 HMPREF9228_RS00160 f108f695781a04764ba3fe553738e825 221 Pfam PF16316 Domain of unknown function (DUF4956) 35 137 7.6E-10 T 22-04-2016 IPR032531 Protein of unknown function DUF4956 HMPREF9228_RS09695 75541ecc6ca16787c089884b3e7f9b19 496 Pfam PF07501 G5 domain 212 282 8.5E-20 T 22-04-2016 IPR011098 G5 domain HMPREF9228_RS09695 75541ecc6ca16787c089884b3e7f9b19 496 SUPERFAMILY SSF53955 414 484 2.44E-5 T 22-04-2016 IPR023346 Lysozyme-like domain HMPREF9228_RS09695 75541ecc6ca16787c089884b3e7f9b19 496 Pfam PF03990 Domain of unknown function (DUF348) 41 79 1.9E-8 T 22-04-2016 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- HMPREF9228_RS09695 75541ecc6ca16787c089884b3e7f9b19 496 SMART SM01208 206 284 4.9E-26 T 22-04-2016 IPR011098 G5 domain HMPREF9228_RS06760 377338533976d9ea9e308b2288e5fffc 796 SUPERFAMILY SSF54001 429 579 1.01E-16 T 22-04-2016 HMPREF9228_RS06760 377338533976d9ea9e308b2288e5fffc 796 Gene3D G3DSA:3.90.260.10 470 552 1.8E-11 T 22-04-2016 IPR002931 Transglutaminase-like HMPREF9228_RS06760 377338533976d9ea9e308b2288e5fffc 796 SMART SM00460 465 548 0.004 T 22-04-2016 IPR002931 Transglutaminase-like HMPREF9228_RS06760 377338533976d9ea9e308b2288e5fffc 796 Pfam PF01841 Transglutaminase-like superfamily 413 546 7.2E-17 T 22-04-2016 IPR002931 Transglutaminase-like HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 SUPERFAMILY SSF47413 13 72 5.57E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 SMART SM00354 14 84 3.4E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 SUPERFAMILY SSF53822 89 352 3.21E-36 T 22-04-2016 IPR028082 Periplasmic binding protein-like I HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 60 6.6E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 PANTHER PTHR30146:SF45 293 358 7.5E-68 T 22-04-2016 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 PANTHER PTHR30146:SF45 14 273 7.5E-68 T 22-04-2016 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 Pfam PF13377 Periplasmic binding protein-like domain 187 358 1.9E-20 T 22-04-2016 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 PANTHER PTHR30146 293 358 7.5E-68 T 22-04-2016 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 PANTHER PTHR30146 14 273 7.5E-68 T 22-04-2016 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 Gene3D G3DSA:3.40.50.2300 193 333 5.7E-26 T 22-04-2016 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 Gene3D G3DSA:3.40.50.2300 64 192 2.3E-21 T 22-04-2016 HMPREF9228_RS03520 1389da310f628d006d6a794e861888de 361 Gene3D G3DSA:1.10.260.40 13 63 3.8E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS04355 5b952f4de38f2153685f35d45c34cb94 247 Gene3D G3DSA:3.60.21.10 1 21 2.7E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS04355 5b952f4de38f2153685f35d45c34cb94 247 Gene3D G3DSA:3.60.21.10 62 225 2.7E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS04355 5b952f4de38f2153685f35d45c34cb94 247 SUPERFAMILY SSF56300 54 194 2.07E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS04355 5b952f4de38f2153685f35d45c34cb94 247 SUPERFAMILY SSF56300 1 12 2.07E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like HMPREF9228_RS08530 6236a193baebf0d21b5a7e7508435cce 405 Gene3D G3DSA:3.40.190.10 30 141 3.8E-15 T 22-04-2016 HMPREF9228_RS08530 6236a193baebf0d21b5a7e7508435cce 405 SUPERFAMILY SSF53850 20 403 7.61E-74 T 22-04-2016 HMPREF9228_RS08530 6236a193baebf0d21b5a7e7508435cce 405 Gene3D G3DSA:3.40.190.10 143 341 3.4E-43 T 22-04-2016 HMPREF9228_RS08530 6236a193baebf0d21b5a7e7508435cce 405 PANTHER PTHR30061 1 341 2.0E-67 T 22-04-2016 HMPREF9228_RS08530 6236a193baebf0d21b5a7e7508435cce 405 Pfam PF01547 Bacterial extracellular solute-binding protein 50 323 2.3E-41 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 HMPREF9228_RS09065 7ab66cbbfbea8e12def66bd6e839f455 708 Gene3D G3DSA:3.90.550.10 432 695 3.9E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09065 7ab66cbbfbea8e12def66bd6e839f455 708 Gene3D G3DSA:3.90.550.10 173 384 6.8E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09065 7ab66cbbfbea8e12def66bd6e839f455 708 PANTHER PTHR22916 120 375 1.8E-41 T 22-04-2016 HMPREF9228_RS09065 7ab66cbbfbea8e12def66bd6e839f455 708 SUPERFAMILY SSF53448 173 384 1.61E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS09065 7ab66cbbfbea8e12def66bd6e839f455 708 Pfam PF00535 Glycosyl transferase family 2 434 555 4.9E-21 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS09065 7ab66cbbfbea8e12def66bd6e839f455 708 Pfam PF00535 Glycosyl transferase family 2 176 336 2.3E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS09065 7ab66cbbfbea8e12def66bd6e839f455 708 SUPERFAMILY SSF53448 431 682 1.31E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS08995 af7580db4364fb1f4ab59aa1ae33c112 241 ProSitePatterns PS00018 EF-hand calcium-binding domain. 201 213 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site HMPREF9228_RS08995 af7580db4364fb1f4ab59aa1ae33c112 241 Pfam PF13828 Domain of unknown function (DUF4190) 102 154 5.9E-12 T 22-04-2016 IPR025241 Domain of unknown function DUF4190 HMPREF9228_RS03380 b171a1edbf1030bcb7818b6567673dc4 236 PANTHER PTHR10434 2 236 3.3E-65 T 22-04-2016 HMPREF9228_RS03380 b171a1edbf1030bcb7818b6567673dc4 236 SMART SM00563 34 153 1.8E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 HMPREF9228_RS03380 b171a1edbf1030bcb7818b6567673dc4 236 SUPERFAMILY SSF69593 2 223 6.41E-37 T 22-04-2016 HMPREF9228_RS03380 b171a1edbf1030bcb7818b6567673dc4 236 Gene3D G3DSA:3.40.1130.10 24 230 8.4E-21 T 22-04-2016 HMPREF9228_RS03380 b171a1edbf1030bcb7818b6567673dc4 236 Pfam PF01553 Acyltransferase 22 150 3.4E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 HMPREF9228_RS03380 b171a1edbf1030bcb7818b6567673dc4 236 PANTHER PTHR10434:SF21 2 236 3.3E-65 T 22-04-2016 HMPREF9228_RS05740 ec518df9cd84872143e3ea62cfc02f4d 292 SUPERFAMILY SSF75217 122 285 2.55E-33 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases HMPREF9228_RS05740 ec518df9cd84872143e3ea62cfc02f4d 292 Pfam PF00588 SpoU rRNA Methylase family 134 280 2.7E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 HMPREF9228_RS05740 ec518df9cd84872143e3ea62cfc02f4d 292 SUPERFAMILY SSF55315 7 112 6.0E-11 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like HMPREF9228_RS05740 ec518df9cd84872143e3ea62cfc02f4d 292 Gene3D G3DSA:3.40.1280.10 129 285 1.1E-39 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal HMPREF9228_RS05740 ec518df9cd84872143e3ea62cfc02f4d 292 Gene3D G3DSA:3.30.1330.30 7 111 5.7E-20 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like HMPREF9228_RS05740 ec518df9cd84872143e3ea62cfc02f4d 292 PANTHER PTHR12029 1 280 2.4E-35 T 22-04-2016 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 5 368 5.4E-167 T 22-04-2016 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 SUPERFAMILY SSF51412 114 368 1.31E-67 T 22-04-2016 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 SUPERFAMILY SSF51412 13 78 1.31E-67 T 22-04-2016 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 Gene3D G3DSA:3.20.20.70 14 368 1.3E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 PANTHER PTHR11911:SF85 152 175 7.1E-14 T 22-04-2016 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 PANTHER PTHR11911:SF85 218 302 7.1E-14 T 22-04-2016 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 17 300 1.3E-40 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 PANTHER PTHR11911 152 175 7.1E-14 T 22-04-2016 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 PANTHER PTHR11911 218 302 7.1E-14 T 22-04-2016 HMPREF9228_RS03705 c45cbd0f4d3c62af8f366cb9b3025c04 374 SMART SM01240 15 371 1.2E-19 T 22-04-2016 HMPREF9228_RS09485 8b4868c730ffcf741ca4b76058659e81 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 182 33.179 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 HMPREF9228_RS09485 8b4868c730ffcf741ca4b76058659e81 193 PANTHER PTHR11241:SF1 1 184 3.7E-63 T 22-04-2016 HMPREF9228_RS09485 8b4868c730ffcf741ca4b76058659e81 193 PANTHER PTHR11241 1 184 3.7E-63 T 22-04-2016 HMPREF9228_RS09485 8b4868c730ffcf741ca4b76058659e81 193 Gene3D G3DSA:2.70.40.10 1 184 1.2E-66 T 22-04-2016 IPR029054 dUTPase-like HMPREF9228_RS09485 8b4868c730ffcf741ca4b76058659e81 193 Pfam PF00692 dUTPase 68 176 4.5E-9 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 HMPREF9228_RS09485 8b4868c730ffcf741ca4b76058659e81 193 SUPERFAMILY SSF51283 1 184 4.06E-56 T 22-04-2016 IPR029054 dUTPase-like HMPREF9228_RS09485 8b4868c730ffcf741ca4b76058659e81 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 181 6.0E-63 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 HMPREF9228_RS05050 3d1aad05e0c825a43e139c25f750e02e 539 SUPERFAMILY SSF102405 168 363 8.24E-25 T 22-04-2016 HMPREF9228_RS05050 3d1aad05e0c825a43e139c25f750e02e 539 PANTHER PTHR32039 152 367 7.3E-50 T 22-04-2016 HMPREF9228_RS05050 3d1aad05e0c825a43e139c25f750e02e 539 Gene3D G3DSA:3.40.50.450 193 346 4.9E-7 T 22-04-2016 HMPREF9228_RS05050 3d1aad05e0c825a43e139c25f750e02e 539 PANTHER PTHR32039:SF8 152 367 7.3E-50 T 22-04-2016 HMPREF9228_RS05050 3d1aad05e0c825a43e139c25f750e02e 539 Pfam PF02481 DNA recombination-mediator protein A 146 367 1.5E-67 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 HMPREF9228_RS08565 65ebd716af21e0bc5f9340a60fd310f8 281 Gene3D G3DSA:3.90.550.10 19 256 3.0E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS08565 65ebd716af21e0bc5f9340a60fd310f8 281 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 124 131 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS08565 65ebd716af21e0bc5f9340a60fd310f8 281 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 21 276 26.149 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS08565 65ebd716af21e0bc5f9340a60fd310f8 281 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 22 253 4.0E-46 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 HMPREF9228_RS08565 65ebd716af21e0bc5f9340a60fd310f8 281 SUPERFAMILY SSF53448 22 252 7.8E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS08565 65ebd716af21e0bc5f9340a60fd310f8 281 PANTHER PTHR32125:SF4 22 268 1.1E-47 T 22-04-2016 HMPREF9228_RS08565 65ebd716af21e0bc5f9340a60fd310f8 281 PANTHER PTHR32125 22 268 1.1E-47 T 22-04-2016 HMPREF9228_RS08545 1bfb6f8a9fa99fd2be9285f6997e4ad3 445 Pfam PF03051 Peptidase C1-like family 7 442 8.2E-142 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS08545 1bfb6f8a9fa99fd2be9285f6997e4ad3 445 Gene3D G3DSA:3.90.70.10 54 445 9.5E-142 T 22-04-2016 HMPREF9228_RS08545 1bfb6f8a9fa99fd2be9285f6997e4ad3 445 PANTHER PTHR10363 7 445 6.3E-156 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS08545 1bfb6f8a9fa99fd2be9285f6997e4ad3 445 PANTHER PTHR10363:SF2 7 445 6.3E-156 T 22-04-2016 HMPREF9228_RS08545 1bfb6f8a9fa99fd2be9285f6997e4ad3 445 SUPERFAMILY SSF54001 6 444 1.08E-104 T 22-04-2016 HMPREF9228_RS08545 1bfb6f8a9fa99fd2be9285f6997e4ad3 445 PIRSF PIRSF005700 3 445 1.9E-158 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 HMPREF9228_RS08545 1bfb6f8a9fa99fd2be9285f6997e4ad3 445 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 66 77 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site HMPREF9228_RS09605 27ad68cf6349c5e0c4246e4f7c9bd1b5 98 PANTHER PTHR33843 1 95 4.8E-17 T 22-04-2016 HMPREF9228_RS09605 27ad68cf6349c5e0c4246e4f7c9bd1b5 98 SUPERFAMILY SSF52794 1 88 4.36E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 HMPREF9228_RS09605 27ad68cf6349c5e0c4246e4f7c9bd1b5 98 Gene3D G3DSA:3.40.50.270 2 89 8.2E-8 T 22-04-2016 HMPREF9228_RS09605 27ad68cf6349c5e0c4246e4f7c9bd1b5 98 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 1.8E-11 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 HMPREF9228_RS09605 27ad68cf6349c5e0c4246e4f7c9bd1b5 98 PANTHER PTHR33843:SF2 1 95 4.8E-17 T 22-04-2016 HMPREF9228_RS07810 3ec67e326c4efd5ddf8f347f3dcaa082 137 Gene3D G3DSA:3.30.300.20 26 134 3.2E-7 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta HMPREF9228_RS07810 3ec67e326c4efd5ddf8f347f3dcaa082 137 Pfam PF02566 OsmC-like protein 31 130 2.3E-7 T 22-04-2016 IPR003718 OsmC/Ohr family HMPREF9228_RS07810 3ec67e326c4efd5ddf8f347f3dcaa082 137 SUPERFAMILY SSF82784 6 133 3.14E-11 T 22-04-2016 IPR003718 OsmC/Ohr family HMPREF9228_RS07905 97968ea785c828abb4382853d9085de1 428 Pfam PF04024 PspC domain 15 69 9.2E-16 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal HMPREF9228_RS07905 97968ea785c828abb4382853d9085de1 428 SUPERFAMILY SSF55874 302 418 5.37E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS07905 97968ea785c828abb4382853d9085de1 428 Gene3D G3DSA:3.30.565.10 316 420 1.9E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain HMPREF9228_RS05555 4e2c86fd3fa38337a8168e318742c79f 237 Pfam PF13346 ABC-2 family transporter protein 38 232 5.1E-13 T 22-04-2016 IPR025699 ABC-2 membrane transporter-like HMPREF9228_RS08260 e642a4e29de785f72cb82f7377ce9624 163 Gene3D G3DSA:3.30.230.10 39 163 2.5E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup HMPREF9228_RS08260 e642a4e29de785f72cb82f7377ce9624 163 PANTHER PTHR21569 31 163 1.6E-59 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08260 e642a4e29de785f72cb82f7377ce9624 163 ProSitePatterns PS00360 Ribosomal protein S9 signature. 101 119 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08260 e642a4e29de785f72cb82f7377ce9624 163 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 33 163 33.409 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid HMPREF9228_RS08260 e642a4e29de785f72cb82f7377ce9624 163 Pfam PF00380 Ribosomal protein S9/S16 42 163 2.0E-43 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08260 e642a4e29de785f72cb82f7377ce9624 163 SUPERFAMILY SSF54211 39 163 8.34E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 Gene3D G3DSA:3.30.1360.60 433 510 3.0E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 PANTHER PTHR30009 3 508 3.1E-185 T 22-04-2016 HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 PANTHER PTHR30009:SF4 3 508 3.1E-185 T 22-04-2016 HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 SUPERFAMILY SSF55604 437 509 7.06E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 450 467 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 507 1.9E-176 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 Pfam PF00367 phosphotransferase system, EIIB 440 472 3.8E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 394 496 1.1E-14 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 HMPREF9228_RS09510 5eb3c503d5e1a881eb98aa2d452a45b1 512 Pfam PF02378 Phosphotransferase system, EIIC 10 334 6.4E-70 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 HMPREF9228_RS05270 86837fc4186d4ed29bbf89da2b8604b6 216 SUPERFAMILY SSF55136 141 214 1.39E-5 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain HMPREF9228_RS05270 86837fc4186d4ed29bbf89da2b8604b6 216 Pfam PF06445 GyrI-like small molecule binding domain 18 210 6.8E-38 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain HMPREF9228_RS05270 86837fc4186d4ed29bbf89da2b8604b6 216 Gene3D G3DSA:3.20.80.10 1 212 2.7E-86 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain HMPREF9228_RS05270 86837fc4186d4ed29bbf89da2b8604b6 216 PIRSF PIRSF031644 1 215 2.1E-88 T 22-04-2016 IPR008319 Uncharacterised conserved protein UCP031644 HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 SUPERFAMILY SSF51430 4 267 7.2E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 PANTHER PTHR11732 3 275 2.1E-131 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 Gene3D G3DSA:3.20.20.100 4 272 1.6E-97 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 42 59 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 Pfam PF00248 Aldo/keto reductase family 25 260 2.9E-43 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 PRINTS PR00069 Aldo-keto reductase signature 38 62 3.3E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 3.3E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 PRINTS PR00069 Aldo-keto reductase signature 94 112 3.3E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 3.3E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS02810 1220871dc205865524e45f241176a07f 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 3.3E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 HMPREF9228_RS01290 5c92ac621981cee517d7ee231ec61900 214 Pfam PF00436 Single-strand binding protein family 7 110 6.9E-24 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 HMPREF9228_RS01290 5c92ac621981cee517d7ee231ec61900 214 SUPERFAMILY SSF50249 6 185 8.23E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS01290 5c92ac621981cee517d7ee231ec61900 214 Gene3D G3DSA:2.40.50.140 4 121 4.3E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold HMPREF9228_RS01290 5c92ac621981cee517d7ee231ec61900 214 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 7 170 9.8E-26 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 HMPREF9228_RS01290 5c92ac621981cee517d7ee231ec61900 214 PANTHER PTHR10302 7 172 1.5E-17 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 HMPREF9228_RS01290 5c92ac621981cee517d7ee231ec61900 214 Hamap MF_00984 Single-stranded DNA-binding protein. 4 117 27.766 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 HMPREF9228_RS00395 70d8197c8f41eef9f695289d9beae0f5 352 SUPERFAMILY SSF53448 3 193 6.09E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS00395 70d8197c8f41eef9f695289d9beae0f5 352 Gene3D G3DSA:3.90.550.10 257 298 2.9E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS00395 70d8197c8f41eef9f695289d9beae0f5 352 Gene3D G3DSA:3.90.550.10 4 195 2.9E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases HMPREF9228_RS00395 70d8197c8f41eef9f695289d9beae0f5 352 PANTHER PTHR22916 1 193 3.0E-31 T 22-04-2016 HMPREF9228_RS00395 70d8197c8f41eef9f695289d9beae0f5 352 Pfam PF00535 Glycosyl transferase family 2 5 141 1.1E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like HMPREF9228_RS00720 5ad845c2e2a3c944204b1e1772bdd205 81 Gene3D G3DSA:3.40.1350.10 8 78 7.4E-4 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 Gene3D G3DSA:3.40.50.300 377 473 6.0E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 Gene3D G3DSA:3.40.50.300 731 833 6.0E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 SUPERFAMILY SSF52540 660 838 1.84E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 SUPERFAMILY SSF52540 17 125 1.84E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 SUPERFAMILY SSF52540 172 355 1.84E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 SUPERFAMILY SSF52540 387 484 1.84E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 Gene3D G3DSA:3.40.50.300 14 142 2.9E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 Gene3D G3DSA:3.40.50.300 221 327 2.9E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06740 5a078475aed1084a51e685f253df571b 1365 Pfam PF12705 PD-(D/E)XK nuclease superfamily 955 1236 1.5E-15 T 22-04-2016 HMPREF9228_RS09515 d9d1b3872348b612b22e38d41795d791 404 PANTHER PTHR23517:SF3 10 376 7.5E-62 T 22-04-2016 HMPREF9228_RS09515 d9d1b3872348b612b22e38d41795d791 404 PANTHER PTHR23517 10 376 7.5E-62 T 22-04-2016 HMPREF9228_RS09515 d9d1b3872348b612b22e38d41795d791 404 Pfam PF07690 Major Facilitator Superfamily 12 228 2.5E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS09515 d9d1b3872348b612b22e38d41795d791 404 SUPERFAMILY SSF103473 9 381 1.2E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS09515 d9d1b3872348b612b22e38d41795d791 404 Gene3D G3DSA:1.20.1250.20 10 186 8.1E-29 T 22-04-2016 HMPREF9228_RS09515 d9d1b3872348b612b22e38d41795d791 404 Gene3D G3DSA:1.20.1250.20 212 382 2.2E-21 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 143 163 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PANTHER PTHR22912 242 338 8.5E-141 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PANTHER PTHR22912 1 220 8.5E-141 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.1E-36 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.1E-36 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.1E-36 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 5.1E-36 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 5.1E-36 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 Gene3D G3DSA:3.50.50.60 2 125 6.1E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 Gene3D G3DSA:3.50.50.60 126 260 6.4E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 3.6E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 136 148 3.6E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 3.6E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 38 53 3.6E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 318 337 3.6E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 114 122 3.6E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 3.6E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PANTHER PTHR22912:SF48 242 338 8.5E-141 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 PANTHER PTHR22912:SF48 1 220 8.5E-141 T 22-04-2016 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 SUPERFAMILY SSF51905 2 337 5.42E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 2.1E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS09735 f446b4af28b3c5b2164185999dede8dd 339 Gene3D G3DSA:3.50.50.60 261 337 8.9E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 HMPREF9228_RS00705 b9591a7bbe1b156cdd2f89fee636c6ec 67 ProDom PD054970 EXCISIONASE DNA TRANSPOSON TN916 XIS TRANSPOSABLE XIS-TN FROM INTEGRATION ELEMENT 5 53 1.0E-20 T 22-04-2016 IPR015122 Excisionase from transposon Tn916 HMPREF9228_RS00705 b9591a7bbe1b156cdd2f89fee636c6ec 67 PIRSF PIRSF004323 1 67 5.9E-45 T 22-04-2016 IPR015122 Excisionase from transposon Tn916 HMPREF9228_RS00705 b9591a7bbe1b156cdd2f89fee636c6ec 67 Pfam PF09035 Excisionase from transposon Tn916 4 63 2.0E-18 T 22-04-2016 IPR015122 Excisionase from transposon Tn916 HMPREF9228_RS01165 68602cb403f57db5d0d628083e8b5d9c 432 Pfam PF06541 Putative ABC-transporter type IV 226 382 5.2E-43 T 22-04-2016 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 HMPREF9228_RS08155 029082083f4745e17339be7e2d916be3 83 Gene3D G3DSA:1.10.287.310 10 72 4.2E-28 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08155 029082083f4745e17339be7e2d916be3 83 TIGRFAM TIGR00012 L29: ribosomal protein uL29 13 67 9.2E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08155 029082083f4745e17339be7e2d916be3 83 ProSitePatterns PS00579 Ribosomal protein L29 signature. 46 60 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08155 029082083f4745e17339be7e2d916be3 83 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 8 67 16.26 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08155 029082083f4745e17339be7e2d916be3 83 PANTHER PTHR10916 10 69 2.2E-22 T 22-04-2016 HMPREF9228_RS08155 029082083f4745e17339be7e2d916be3 83 SUPERFAMILY SSF46561 10 70 7.46E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08155 029082083f4745e17339be7e2d916be3 83 Pfam PF00831 Ribosomal L29 protein 11 67 3.8E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS04365 f0a7ff99186144772068de1227b2b948 311 SUPERFAMILY SSF53474 43 309 1.58E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04365 f0a7ff99186144772068de1227b2b948 311 Gene3D G3DSA:3.40.50.1820 35 309 1.6E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04365 f0a7ff99186144772068de1227b2b948 311 Pfam PF07859 alpha/beta hydrolase fold 68 292 5.1E-16 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 HMPREF9228_RS04365 f0a7ff99186144772068de1227b2b948 311 PANTHER PTHR23024 45 210 9.5E-28 T 22-04-2016 HMPREF9228_RS04365 f0a7ff99186144772068de1227b2b948 311 PANTHER PTHR23024 226 309 9.5E-28 T 22-04-2016 HMPREF9228_RS07535 e88fd415448f973c220a0f46d1c89c46 434 Pfam PF02353 Mycolic acid cyclopropane synthetase 140 410 2.0E-94 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS07535 e88fd415448f973c220a0f46d1c89c46 434 PANTHER PTHR10108 69 330 5.0E-103 T 22-04-2016 HMPREF9228_RS07535 e88fd415448f973c220a0f46d1c89c46 434 PANTHER PTHR10108 347 418 5.0E-103 T 22-04-2016 HMPREF9228_RS07535 e88fd415448f973c220a0f46d1c89c46 434 PIRSF PIRSF003085 5 434 5.6E-139 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 HMPREF9228_RS07535 e88fd415448f973c220a0f46d1c89c46 434 PANTHER PTHR10108:SF743 69 330 5.0E-103 T 22-04-2016 HMPREF9228_RS07535 e88fd415448f973c220a0f46d1c89c46 434 PANTHER PTHR10108:SF743 347 418 5.0E-103 T 22-04-2016 HMPREF9228_RS07535 e88fd415448f973c220a0f46d1c89c46 434 Gene3D G3DSA:3.40.50.150 139 413 1.3E-90 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS07535 e88fd415448f973c220a0f46d1c89c46 434 SUPERFAMILY SSF53335 151 415 1.25E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase HMPREF9228_RS08785 67931286e5fdc1ee92cb3e2098a44a93 420 Gene3D G3DSA:1.20.1250.20 15 218 6.1E-21 T 22-04-2016 HMPREF9228_RS08785 67931286e5fdc1ee92cb3e2098a44a93 420 SUPERFAMILY SSF103473 5 412 2.49E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS08785 67931286e5fdc1ee92cb3e2098a44a93 420 PANTHER PTHR23514:SF7 1 419 5.3E-94 T 22-04-2016 HMPREF9228_RS08785 67931286e5fdc1ee92cb3e2098a44a93 420 Pfam PF07690 Major Facilitator Superfamily 16 353 1.3E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS08785 67931286e5fdc1ee92cb3e2098a44a93 420 PANTHER PTHR23514 1 419 5.3E-94 T 22-04-2016 HMPREF9228_RS08785 67931286e5fdc1ee92cb3e2098a44a93 420 Gene3D G3DSA:1.20.1250.20 228 411 4.5E-7 T 22-04-2016 HMPREF9228_RS01850 a1ae354dd33cb9659b2745602cea0410 351 Gene3D G3DSA:3.90.245.10 1 72 2.8E-101 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain HMPREF9228_RS01850 a1ae354dd33cb9659b2745602cea0410 351 Gene3D G3DSA:3.90.245.10 109 347 2.8E-101 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain HMPREF9228_RS01850 a1ae354dd33cb9659b2745602cea0410 351 SUPERFAMILY SSF53590 110 346 1.24E-81 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain HMPREF9228_RS01850 a1ae354dd33cb9659b2745602cea0410 351 SUPERFAMILY SSF53590 2 73 1.24E-81 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain HMPREF9228_RS01850 a1ae354dd33cb9659b2745602cea0410 351 PANTHER PTHR12304 1 74 1.4E-79 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase HMPREF9228_RS01850 a1ae354dd33cb9659b2745602cea0410 351 PANTHER PTHR12304 108 350 1.4E-79 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase HMPREF9228_RS01850 a1ae354dd33cb9659b2745602cea0410 351 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 338 1.6E-63 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain HMPREF9228_RS05940 ae0be1aed25321256b50afec5be41564 216 SUPERFAMILY SSF53474 14 207 5.18E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS05940 ae0be1aed25321256b50afec5be41564 216 Gene3D G3DSA:3.40.50.1820 9 208 7.2E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS05940 ae0be1aed25321256b50afec5be41564 216 Pfam PF02230 Phospholipase/Carboxylesterase 14 207 9.0E-21 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 HMPREF9228_RS05940 ae0be1aed25321256b50afec5be41564 216 PANTHER PTHR10655 14 208 7.9E-17 T 22-04-2016 HMPREF9228_RS05940 ae0be1aed25321256b50afec5be41564 216 PANTHER PTHR10655:SF17 14 208 7.9E-17 T 22-04-2016 HMPREF9228_RS05545 74dfdee4984d6d6051c37b019fd266ee 124 Pfam PF14198 Transposon-encoded protein TnpV 11 122 2.1E-45 T 22-04-2016 IPR026989 Transposon-encoded protein TnpV HMPREF9228_RS09575 d862cf371fba633925e3a8733a996245 334 PANTHER PTHR32196 2 315 2.3E-112 T 22-04-2016 HMPREF9228_RS09575 d862cf371fba633925e3a8733a996245 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 306 2.2E-51 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS09575 d862cf371fba633925e3a8733a996245 334 PANTHER PTHR32196:SF21 2 315 2.3E-112 T 22-04-2016 HMPREF9228_RS07155 b4ecd35edec00718adede15af844c939 421 SUPERFAMILY SSF103473 5 409 1.44E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS07155 b4ecd35edec00718adede15af844c939 421 Pfam PF07690 Major Facilitator Superfamily 19 318 4.7E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 HMPREF9228_RS07155 b4ecd35edec00718adede15af844c939 421 Gene3D G3DSA:1.20.1250.20 231 410 1.6E-14 T 22-04-2016 HMPREF9228_RS07155 b4ecd35edec00718adede15af844c939 421 Gene3D G3DSA:1.20.1250.20 13 196 3.6E-22 T 22-04-2016 HMPREF9228_RS07155 b4ecd35edec00718adede15af844c939 421 PANTHER PTHR11360 10 421 1.3E-37 T 22-04-2016 HMPREF9228_RS03745 f86749caaae29136519e445556227124 328 PANTHER PTHR13773 6 323 1.2E-51 T 22-04-2016 HMPREF9228_RS03745 f86749caaae29136519e445556227124 328 PANTHER PTHR13773:SF0 6 323 1.2E-51 T 22-04-2016 HMPREF9228_RS03745 f86749caaae29136519e445556227124 328 Pfam PF01148 Cytidylyltransferase family 29 324 9.6E-48 T 22-04-2016 HMPREF9228_RS01745 62532ef1e27c8853010114a2a623221e 445 SUPERFAMILY SSF53474 296 423 1.04E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS01745 62532ef1e27c8853010114a2a623221e 445 SUPERFAMILY SSF53474 200 257 1.04E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS01745 62532ef1e27c8853010114a2a623221e 445 Gene3D G3DSA:3.40.50.1820 140 258 3.3E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS01745 62532ef1e27c8853010114a2a623221e 445 Gene3D G3DSA:3.40.50.1820 29 48 3.3E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS01745 62532ef1e27c8853010114a2a623221e 445 SUPERFAMILY SSF53474 166 290 7.87E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS01745 62532ef1e27c8853010114a2a623221e 445 Pfam PF11187 Protein of unknown function (DUF2974) 125 355 4.5E-91 T 22-04-2016 IPR024499 Protein of unknown function DUF2974 HMPREF9228_RS05810 4f7e66280371c64575f1338600b39bfd 403 Gene3D G3DSA:3.90.1150.10 267 391 1.3E-9 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 HMPREF9228_RS05810 4f7e66280371c64575f1338600b39bfd 403 SUPERFAMILY SSF53383 53 393 5.24E-55 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase HMPREF9228_RS05810 4f7e66280371c64575f1338600b39bfd 403 PANTHER PTHR11751 56 391 5.1E-56 T 22-04-2016 HMPREF9228_RS05810 4f7e66280371c64575f1338600b39bfd 403 Pfam PF00155 Aminotransferase class I and II 55 375 2.4E-30 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 HMPREF9228_RS05810 4f7e66280371c64575f1338600b39bfd 403 Gene3D G3DSA:3.40.640.10 56 266 2.5E-47 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 HMPREF9228_RS01870 8eecde8f4e65baf196daaa4c0cbeacbe 277 PANTHER PTHR32243 1 277 3.0E-88 T 22-04-2016 HMPREF9228_RS01870 8eecde8f4e65baf196daaa4c0cbeacbe 277 SUPERFAMILY SSF161098 6 277 1.03E-73 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01870 8eecde8f4e65baf196daaa4c0cbeacbe 277 Gene3D G3DSA:1.10.3720.10 4 264 1.1E-72 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS01870 8eecde8f4e65baf196daaa4c0cbeacbe 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 266 1.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS02270 c7b347d1f4eb11635d959a102109bbec 284 SUPERFAMILY SSF140931 68 239 3.53E-29 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS02270 c7b347d1f4eb11635d959a102109bbec 284 Pfam PF02661 Fic/DOC family 91 188 8.9E-13 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS02270 c7b347d1f4eb11635d959a102109bbec 284 Gene3D G3DSA:1.10.3290.10 20 219 2.1E-43 T 22-04-2016 IPR003812 Fido domain HMPREF9228_RS02270 c7b347d1f4eb11635d959a102109bbec 284 PANTHER PTHR13504 22 214 5.0E-21 T 22-04-2016 HMPREF9228_RS06265 e4cc1d2e29488633e4e3ceaa44f03c4c 95 Pfam PF14014 Protein of unknown function (DUF4230) 1 63 1.4E-8 T 22-04-2016 IPR025324 Protein of unknown function DUF4230 HMPREF9228_RS06610 f988b8e5cfbe920a9fcad9339a247625 473 Pfam PF01547 Bacterial extracellular solute-binding protein 47 329 5.0E-31 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 HMPREF9228_RS06610 f988b8e5cfbe920a9fcad9339a247625 473 Gene3D G3DSA:3.40.190.10 314 354 7.3E-29 T 22-04-2016 HMPREF9228_RS06610 f988b8e5cfbe920a9fcad9339a247625 473 Gene3D G3DSA:3.40.190.10 37 142 7.3E-29 T 22-04-2016 HMPREF9228_RS06610 f988b8e5cfbe920a9fcad9339a247625 473 SUPERFAMILY SSF53850 36 353 3.66E-55 T 22-04-2016 HMPREF9228_RS06610 f988b8e5cfbe920a9fcad9339a247625 473 Gene3D G3DSA:3.40.190.10 143 313 9.9E-29 T 22-04-2016 HMPREF9228_RS06610 f988b8e5cfbe920a9fcad9339a247625 473 PANTHER PTHR30061 11 452 3.7E-60 T 22-04-2016 HMPREF9228_RS06610 f988b8e5cfbe920a9fcad9339a247625 473 PANTHER PTHR30061:SF25 11 452 3.7E-60 T 22-04-2016 HMPREF9228_RS00975 01566a5e915fa5b74985404f8cb0531e 219 SUPERFAMILY SSF53254 4 210 4.06E-35 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS00975 01566a5e915fa5b74985404f8cb0531e 219 PANTHER PTHR23029:SF35 4 219 1.5E-39 T 22-04-2016 HMPREF9228_RS00975 01566a5e915fa5b74985404f8cb0531e 219 Gene3D G3DSA:3.40.50.1240 4 206 3.2E-33 T 22-04-2016 IPR029033 Histidine phosphatase superfamily HMPREF9228_RS00975 01566a5e915fa5b74985404f8cb0531e 219 PANTHER PTHR23029 4 219 1.5E-39 T 22-04-2016 HMPREF9228_RS00975 01566a5e915fa5b74985404f8cb0531e 219 SMART SM00855 5 171 3.7E-15 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS00975 01566a5e915fa5b74985404f8cb0531e 219 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 204 2.6E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 HMPREF9228_RS03235 ba855273215b6d56121525a000a47e56 308 Gene3D G3DSA:1.10.3720.10 88 303 1.1E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03235 ba855273215b6d56121525a000a47e56 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 307 2.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03235 ba855273215b6d56121525a000a47e56 308 PANTHER PTHR30465 1 307 9.6E-113 T 22-04-2016 HMPREF9228_RS03235 ba855273215b6d56121525a000a47e56 308 SUPERFAMILY SSF161098 90 289 4.45E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 HMPREF9228_RS03235 ba855273215b6d56121525a000a47e56 308 PANTHER PTHR30465:SF0 1 307 9.6E-113 T 22-04-2016 HMPREF9228_RS05460 121369c2bd8782760040cc07f947effd 485 PANTHER PTHR30182 2 483 2.3E-230 T 22-04-2016 HMPREF9228_RS05460 121369c2bd8782760040cc07f947effd 485 Pfam PF03313 Serine dehydratase alpha chain 205 479 4.0E-103 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit HMPREF9228_RS05460 121369c2bd8782760040cc07f947effd 485 Gene3D G3DSA:3.30.1330.90 10 155 9.6E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain HMPREF9228_RS05460 121369c2bd8782760040cc07f947effd 485 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 482 9.5E-192 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 HMPREF9228_RS05460 121369c2bd8782760040cc07f947effd 485 SUPERFAMILY SSF143548 16 154 9.94E-46 T 22-04-2016 IPR029009 Allosteric substrate binding domain HMPREF9228_RS05460 121369c2bd8782760040cc07f947effd 485 Pfam PF03315 Serine dehydratase beta chain 3 154 2.3E-56 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 HMPREF9228_RS05460 121369c2bd8782760040cc07f947effd 485 PANTHER PTHR30182:SF1 2 483 2.3E-230 T 22-04-2016 HMPREF9228_RS03130 fab0653ea1fcffb9ce8912dcab2a0c91 279 Pfam PF13614 AAA domain 26 202 4.8E-62 T 22-04-2016 IPR025669 AAA domain HMPREF9228_RS03130 fab0653ea1fcffb9ce8912dcab2a0c91 279 Gene3D G3DSA:3.40.50.300 26 275 4.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS03130 fab0653ea1fcffb9ce8912dcab2a0c91 279 PANTHER PTHR13696 8 275 1.1E-84 T 22-04-2016 HMPREF9228_RS03130 fab0653ea1fcffb9ce8912dcab2a0c91 279 PANTHER PTHR13696:SF78 8 275 1.1E-84 T 22-04-2016 HMPREF9228_RS03130 fab0653ea1fcffb9ce8912dcab2a0c91 279 SUPERFAMILY SSF52540 25 274 1.27E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS06035 2d409beb6b8988d0d0dc658bf0d122ab 66 Gene3D G3DSA:3.40.50.720 28 55 6.2E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00145 2b64308786e0a9fd21ac9099971642f2 515 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 454 1.2E-138 T 22-04-2016 IPR031617 Putative exopolysaccharide exporter HMPREF9228_RS03300 4faa0e30c1e7443b7d444ffdbf40b83b 315 SUPERFAMILY SSF103481 227 305 2.48E-13 T 22-04-2016 HMPREF9228_RS03300 4faa0e30c1e7443b7d444ffdbf40b83b 315 PANTHER PTHR12715 1 48 6.9E-48 T 22-04-2016 HMPREF9228_RS03300 4faa0e30c1e7443b7d444ffdbf40b83b 315 PANTHER PTHR12715 73 314 6.9E-48 T 22-04-2016 HMPREF9228_RS03300 4faa0e30c1e7443b7d444ffdbf40b83b 315 Pfam PF00892 EamA-like transporter family 170 301 2.4E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS03300 4faa0e30c1e7443b7d444ffdbf40b83b 315 Pfam PF00892 EamA-like transporter family 2 156 3.3E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 HMPREF9228_RS09830 0b59b203384a36066f55cf988d652787 164 SUPERFAMILY SSF52540 6 157 8.5E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09830 0b59b203384a36066f55cf988d652787 164 Gene3D G3DSA:3.40.50.300 2 161 1.1E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS09830 0b59b203384a36066f55cf988d652787 164 Pfam PF12696 TraM recognition site of TraD and TraG 26 143 1.3E-37 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site HMPREF9228_RS06205 51b3d25a94f922cbe063cc820c700d7f 357 Pfam PF01758 Sodium Bile acid symporter family 43 215 8.4E-37 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 HMPREF9228_RS06205 51b3d25a94f922cbe063cc820c700d7f 357 PANTHER PTHR10361 6 314 2.9E-70 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 HMPREF9228_RS03655 7b413627e37a4c6e9515491607af7f53 279 Pfam PF12730 ABC-2 family transporter protein 29 205 6.5E-8 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 HMPREF9228_RS02850 0f1f3e7fb2467017b67ffdd5fdd2a57f 478 PANTHER PTHR39441 25 478 3.1E-82 T 22-04-2016 HMPREF9228_RS02850 0f1f3e7fb2467017b67ffdd5fdd2a57f 478 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 67 468 1.8E-135 T 22-04-2016 IPR018721 Protein of unknown function DUF2252 HMPREF9228_RS07030 092b16c6643ddc6a6cf45554095c7ed1 131 Pfam PF05025 RbsD / FucU transport protein family 1 129 3.9E-33 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 HMPREF9228_RS07030 092b16c6643ddc6a6cf45554095c7ed1 131 SUPERFAMILY SSF102546 1 131 8.76E-29 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 HMPREF9228_RS07030 092b16c6643ddc6a6cf45554095c7ed1 131 PANTHER PTHR37831 3 131 9.8E-33 T 22-04-2016 HMPREF9228_RS07030 092b16c6643ddc6a6cf45554095c7ed1 131 PANTHER PTHR37831:SF1 3 131 9.8E-33 T 22-04-2016 HMPREF9228_RS07030 092b16c6643ddc6a6cf45554095c7ed1 131 Gene3D G3DSA:3.40.1650.10 1 130 3.9E-19 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 HMPREF9228_RS08185 ed79bde568cef2cd2cd137c55ad2e9ff 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 9 98 21.974 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08185 ed79bde568cef2cd2cd137c55ad2e9ff 98 Pfam PF00276 Ribosomal protein L23 10 95 8.2E-32 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 HMPREF9228_RS08185 ed79bde568cef2cd2cd137c55ad2e9ff 98 PANTHER PTHR11620 8 96 2.1E-27 T 22-04-2016 HMPREF9228_RS08185 ed79bde568cef2cd2cd137c55ad2e9ff 98 SUPERFAMILY SSF54189 9 97 2.3E-31 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08185 ed79bde568cef2cd2cd137c55ad2e9ff 98 Gene3D G3DSA:3.30.70.330 8 98 5.3E-35 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 HMPREF9228_RS00135 214b7042ccd182734c5fb3e2bdde340d 626 Pfam PF09960 Uncharacterised protein conserved in bacteria (DUF2194) 210 608 6.8E-140 T 22-04-2016 IPR018695 Protein of unknown function DUF2194 HMPREF9228_RS00135 214b7042ccd182734c5fb3e2bdde340d 626 Pfam PF09960 Uncharacterised protein conserved in bacteria (DUF2194) 70 194 3.2E-21 T 22-04-2016 IPR018695 Protein of unknown function DUF2194 HMPREF9228_RS00135 214b7042ccd182734c5fb3e2bdde340d 626 SUPERFAMILY SSF88713 305 549 1.26E-5 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 HMPREF9228_RS07110 29b60c5328292031f6ecb7cb8ec7142a 217 Pfam PF12822 Protein of unknown function (DUF3816) 18 184 4.2E-10 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 HMPREF9228_RS08595 e570b05bd90197e0c5197bee7048654b 64 Gene3D G3DSA:4.10.1160.10 19 62 1.3E-22 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08595 e570b05bd90197e0c5197bee7048654b 64 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.751 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08595 e570b05bd90197e0c5197bee7048654b 64 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 9.3E-24 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 HMPREF9228_RS08595 e570b05bd90197e0c5197bee7048654b 64 Pfam PF00830 Ribosomal L28 family 4 58 4.5E-22 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 HMPREF9228_RS08595 e570b05bd90197e0c5197bee7048654b 64 SUPERFAMILY SSF143800 1 61 1.29E-24 T 22-04-2016 HMPREF9228_RS08595 e570b05bd90197e0c5197bee7048654b 64 PANTHER PTHR13528 1 55 3.9E-14 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 HMPREF9228_RS04145 217790e32eaaf946cfd08be26bfa3346 445 Pfam PF05525 Branched-chain amino acid transport protein 8 439 6.5E-127 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 HMPREF9228_RS04145 217790e32eaaf946cfd08be26bfa3346 445 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 430 1.4E-112 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 HMPREF9228_RS04145 217790e32eaaf946cfd08be26bfa3346 445 PANTHER PTHR30588:SF0 2 439 5.1E-140 T 22-04-2016 HMPREF9228_RS04145 217790e32eaaf946cfd08be26bfa3346 445 PANTHER PTHR30588 2 439 5.1E-140 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 HMPREF9228_RS04145 217790e32eaaf946cfd08be26bfa3346 445 Gene3D G3DSA:1.20.1300.10 123 209 6.5E-4 T 22-04-2016 HMPREF9228_RS02970 e001d6ddd33872cad91c5e5b67e07d59 344 PANTHER PTHR37820 42 343 9.1E-21 T 22-04-2016 HMPREF9228_RS02970 e001d6ddd33872cad91c5e5b67e07d59 344 Pfam PF08478 POTRA domain, FtsQ-type 145 210 1.8E-12 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type HMPREF9228_RS01715 078e3d4ad1fc510af3dc83b04113c7ce 458 Gene3D G3DSA:3.40.190.10 179 372 7.9E-33 T 22-04-2016 HMPREF9228_RS01715 078e3d4ad1fc510af3dc83b04113c7ce 458 SUPERFAMILY SSF53850 22 454 3.7E-62 T 22-04-2016 HMPREF9228_RS01715 078e3d4ad1fc510af3dc83b04113c7ce 458 PANTHER PTHR30061 5 417 1.5E-50 T 22-04-2016 HMPREF9228_RS01715 078e3d4ad1fc510af3dc83b04113c7ce 458 Pfam PF01547 Bacterial extracellular solute-binding protein 65 351 6.4E-29 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 HMPREF9228_RS01715 078e3d4ad1fc510af3dc83b04113c7ce 458 Gene3D G3DSA:3.40.190.10 52 178 2.7E-21 T 22-04-2016 HMPREF9228_RS01520 a567940970ecb8ee2fab4924ba5e7206 256 SMART SM00862 150 224 1.6E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 HMPREF9228_RS01520 a567940970ecb8ee2fab4924ba5e7206 256 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 3.2E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 HMPREF9228_RS01520 a567940970ecb8ee2fab4924ba5e7206 256 PANTHER PTHR26402:SF506 25 112 1.5E-48 T 22-04-2016 HMPREF9228_RS01520 a567940970ecb8ee2fab4924ba5e7206 256 PANTHER PTHR26402:SF506 128 224 1.5E-48 T 22-04-2016 HMPREF9228_RS01520 a567940970ecb8ee2fab4924ba5e7206 256 PANTHER PTHR26402 25 112 1.5E-48 T 22-04-2016 HMPREF9228_RS01520 a567940970ecb8ee2fab4924ba5e7206 256 PANTHER PTHR26402 128 224 1.5E-48 T 22-04-2016 HMPREF9228_RS01520 a567940970ecb8ee2fab4924ba5e7206 256 SUPERFAMILY SSF46894 126 225 2.3E-31 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 HMPREF9228_RS01520 a567940970ecb8ee2fab4924ba5e7206 256 Gene3D G3DSA:1.10.10.10 129 227 1.7E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS08490 37065183e36d8e586965e0c70529efba 378 PANTHER PTHR21225 1 378 6.0E-183 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 HMPREF9228_RS08490 37065183e36d8e586965e0c70529efba 378 Pfam PF00793 DAHP synthetase I family 64 362 1.2E-86 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 HMPREF9228_RS08490 37065183e36d8e586965e0c70529efba 378 PIRSF PIRSF001361 15 377 2.7E-157 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 HMPREF9228_RS08490 37065183e36d8e586965e0c70529efba 378 SUPERFAMILY SSF51569 27 373 1.88E-121 T 22-04-2016 HMPREF9228_RS08490 37065183e36d8e586965e0c70529efba 378 Gene3D G3DSA:3.20.20.70 29 375 3.2E-137 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 HMPREF9228_RS08490 37065183e36d8e586965e0c70529efba 378 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 27 374 2.0E-138 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 HMPREF9228_RS08620 dcf412daed8e05fb50bce6154f40b83f 107 Pfam PF04221 RelB antitoxin 2 53 8.8E-11 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ HMPREF9228_RS01100 efb4fcc7f1c604496b300ee6a818ef5d 64 Pfam PF12728 Helix-turn-helix domain 17 61 6.8E-7 T 22-04-2016 HMPREF9228_RS01130 83e4e8aeedf6df684f41e9621ab30760 434 PANTHER PTHR30489 282 434 2.7E-49 T 22-04-2016 HMPREF9228_RS01130 83e4e8aeedf6df684f41e9621ab30760 434 PANTHER PTHR30489 1 263 2.7E-49 T 22-04-2016 HMPREF9228_RS01130 83e4e8aeedf6df684f41e9621ab30760 434 PANTHER PTHR30489:SF16 282 434 2.7E-49 T 22-04-2016 HMPREF9228_RS01130 83e4e8aeedf6df684f41e9621ab30760 434 PANTHER PTHR30489:SF16 1 263 2.7E-49 T 22-04-2016 HMPREF9228_RS01130 83e4e8aeedf6df684f41e9621ab30760 434 Pfam PF12704 MacB-like periplasmic core domain 19 240 2.0E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain HMPREF9228_RS01130 83e4e8aeedf6df684f41e9621ab30760 434 Pfam PF02687 FtsX-like permease family 313 427 1.4E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS03945 3718e5bab25f82b2560dfa21f97b9b69 273 PANTHER PTHR37313 49 273 5.3E-43 T 22-04-2016 HMPREF9228_RS03945 3718e5bab25f82b2560dfa21f97b9b69 273 PANTHER PTHR37313:SF3 49 273 5.3E-43 T 22-04-2016 HMPREF9228_RS03945 3718e5bab25f82b2560dfa21f97b9b69 273 Pfam PF05949 Bacterial protein of unknown function (DUF881) 136 270 8.2E-32 T 22-04-2016 IPR010273 Protein of unknown function DUF881 HMPREF9228_RS05395 83e803bf8472e48a8669919e35946dfa 267 SUPERFAMILY SSF56784 19 251 1.32E-35 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05395 83e803bf8472e48a8669919e35946dfa 267 Gene3D G3DSA:3.40.50.1000 19 95 3.7E-14 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05395 83e803bf8472e48a8669919e35946dfa 267 Gene3D G3DSA:3.40.50.1000 191 252 3.7E-14 T 22-04-2016 IPR023214 HAD-like domain HMPREF9228_RS05395 83e803bf8472e48a8669919e35946dfa 267 Pfam PF03332 Eukaryotic phosphomannomutase 134 260 4.0E-9 T 22-04-2016 IPR005002 Eukaryotic phosphomannomutase GO:0004615|GO:0005737|GO:0009298 KEGG: 00051+5.4.2.8|KEGG: 00520+5.4.2.8|MetaCyc: PWY-5659|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: REACT_17015|UniPathway: UPA00126 HMPREF9228_RS05395 83e803bf8472e48a8669919e35946dfa 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 23 244 2.4E-16 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 HMPREF9228_RS04045 b298a43557039ac022b3d2bbc9c7a50c 193 Pfam PF00156 Phosphoribosyl transferase domain 69 168 1.1E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 HMPREF9228_RS04045 b298a43557039ac022b3d2bbc9c7a50c 193 Gene3D G3DSA:3.40.50.2020 25 190 1.3E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS04045 b298a43557039ac022b3d2bbc9c7a50c 193 PANTHER PTHR32315 7 190 9.8E-73 T 22-04-2016 HMPREF9228_RS04045 b298a43557039ac022b3d2bbc9c7a50c 193 SUPERFAMILY SSF53271 23 183 3.28E-42 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like HMPREF9228_RS04045 b298a43557039ac022b3d2bbc9c7a50c 193 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 22 191 33.149 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 HMPREF9228_RS04045 b298a43557039ac022b3d2bbc9c7a50c 193 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 24 189 4.2E-56 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 HMPREF9228_RS00945 316b48d46dad9a3111bd89bdc6c78e61 184 Pfam PF01161 Phosphatidylethanolamine-binding protein 26 167 2.8E-15 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein HMPREF9228_RS00945 316b48d46dad9a3111bd89bdc6c78e61 184 SUPERFAMILY SSF49777 10 167 1.09E-24 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein HMPREF9228_RS00945 316b48d46dad9a3111bd89bdc6c78e61 184 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 25 168 1.3E-21 T 22-04-2016 IPR005247 YbhB/YbcL HMPREF9228_RS00945 316b48d46dad9a3111bd89bdc6c78e61 184 Gene3D G3DSA:3.90.280.10 6 167 2.2E-35 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein HMPREF9228_RS05625 b5dd021ad404875a64dbcf7efa48e50d 255 Pfam PF06541 Putative ABC-transporter type IV 10 163 4.5E-48 T 22-04-2016 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 HMPREF9228_RS01735 997bdd593d81a0e9d366fd708ed76125 117 Pfam PF00872 Transposase, Mutator family 6 89 7.0E-13 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 HMPREF9228_RS00355 7f74c38725e889403661cd29430668f8 167 SUPERFAMILY SSF49764 11 155 9.77E-32 T 22-04-2016 IPR008978 HSP20-like chaperone HMPREF9228_RS00355 7f74c38725e889403661cd29430668f8 167 Pfam PF00011 Hsp20/alpha crystallin family 44 165 6.0E-18 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain HMPREF9228_RS00355 7f74c38725e889403661cd29430668f8 167 PANTHER PTHR11527 1 167 1.5E-26 T 22-04-2016 IPR031107 Small heat shock protein HSP20 HMPREF9228_RS00355 7f74c38725e889403661cd29430668f8 167 Gene3D G3DSA:2.60.40.790 13 166 5.1E-38 T 22-04-2016 IPR008978 HSP20-like chaperone HMPREF9228_RS04690 ddff2db941de53c028ce64265092b033 161 Gene3D G3DSA:3.40.140.10 8 150 1.5E-33 T 22-04-2016 HMPREF9228_RS04690 ddff2db941de53c028ce64265092b033 161 SUPERFAMILY SSF53927 9 148 7.18E-17 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 HMPREF9228_RS02475 314a9fb72cc77c2191bf7977ad619085 349 Pfam PF11228 Protein of unknown function (DUF3027) 32 224 2.0E-81 T 22-04-2016 IPR021391 Protein of unknown function DUF3027 HMPREF9228_RS05995 ef56c7e2bd7d10c07880495465260430 262 PANTHER PTHR30028:SF0 1 255 2.8E-56 T 22-04-2016 IPR005226 UPF0014 family HMPREF9228_RS05995 ef56c7e2bd7d10c07880495465260430 262 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 250 5.4E-68 T 22-04-2016 IPR005226 UPF0014 family HMPREF9228_RS05995 ef56c7e2bd7d10c07880495465260430 262 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 9 255 2.2E-49 T 22-04-2016 IPR005226 UPF0014 family HMPREF9228_RS05995 ef56c7e2bd7d10c07880495465260430 262 PANTHER PTHR30028 1 255 2.8E-56 T 22-04-2016 HMPREF9228_RS07100 42cf35e53c5c921168059946537947b0 276 PANTHER PTHR24220 6 241 6.2E-81 T 22-04-2016 HMPREF9228_RS07100 42cf35e53c5c921168059946537947b0 276 Gene3D G3DSA:3.40.50.300 2 239 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07100 42cf35e53c5c921168059946537947b0 276 SUPERFAMILY SSF52540 3 238 1.09E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07100 42cf35e53c5c921168059946537947b0 276 Pfam PF00005 ABC transporter 23 174 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 HMPREF9228_RS07100 42cf35e53c5c921168059946537947b0 276 SMART SM00382 31 223 1.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain HMPREF9228_RS02455 204d3a3231d20007c680ab49d57f8aa5 231 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 29 149 1.1E-9 T 22-04-2016 IPR007621 TPM domain HMPREF9228_RS02455 204d3a3231d20007c680ab49d57f8aa5 231 Gene3D G3DSA:2.60.120.200 148 203 3.6E-5 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain HMPREF9228_RS04685 206a1ebadad81267db7f2d9a84767308 118 Pfam PF13630 SdpI/YhfL protein family 31 104 7.8E-11 T 22-04-2016 IPR025962 SdpI/YhfL protein family HMPREF9228_RS01740 3016caabf70135d078e4f38a3e6e8e91 221 Gene3D G3DSA:1.10.357.10 14 179 3.7E-15 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 HMPREF9228_RS01740 3016caabf70135d078e4f38a3e6e8e91 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 55 5.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 HMPREF9228_RS01740 3016caabf70135d078e4f38a3e6e8e91 221 SUPERFAMILY SSF46689 12 69 2.51E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS02180 da3ddc2c6aa576ccc523c788ccd01a03 376 SUPERFAMILY SSF53756 6 367 9.03E-59 T 22-04-2016 HMPREF9228_RS02180 da3ddc2c6aa576ccc523c788ccd01a03 376 Gene3D G3DSA:3.40.50.2000 165 303 5.6E-22 T 22-04-2016 HMPREF9228_RS02180 da3ddc2c6aa576ccc523c788ccd01a03 376 Pfam PF13439 Glycosyltransferase Family 4 17 176 2.2E-10 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain HMPREF9228_RS02180 da3ddc2c6aa576ccc523c788ccd01a03 376 PANTHER PTHR12526 1 303 6.5E-37 T 22-04-2016 HMPREF9228_RS02180 da3ddc2c6aa576ccc523c788ccd01a03 376 Pfam PF00534 Glycosyl transferases group 1 186 309 1.8E-25 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 HMPREF9228_RS07785 bc90b034b2b199355b8f14ea9dc1f451 407 PANTHER PTHR30489 1 406 1.3E-23 T 22-04-2016 HMPREF9228_RS07785 bc90b034b2b199355b8f14ea9dc1f451 407 Pfam PF02687 FtsX-like permease family 277 397 3.1E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS03990 ecd376669fd0db118d05720c5a702c99 637 Pfam PF13280 WYL domain 444 629 4.5E-13 T 22-04-2016 IPR026881 WYL domain HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 PANTHER PTHR10438:SF266 7 112 3.0E-34 T 22-04-2016 HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 PIRSF PIRSF000077 1 106 7.7E-31 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 PANTHER PTHR10438 7 112 3.0E-34 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 104 8.1E-32 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 SUPERFAMILY SSF52833 5 105 2.02E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 Pfam PF00085 Thioredoxin 5 103 1.1E-27 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 Gene3D G3DSA:3.40.30.10 4 104 6.1E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 PRINTS PR00421 Thioredoxin family signature 70 81 4.1E-7 T 22-04-2016 HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 PRINTS PR00421 Thioredoxin family signature 21 29 4.1E-7 T 22-04-2016 HMPREF9228_RS06880 77bc730cfe2db898f2c513ca89716264 123 PRINTS PR00421 Thioredoxin family signature 29 38 4.1E-7 T 22-04-2016 HMPREF9228_RS02185 f9a519a11bab41d6b6d45a441a05c1c6 355 Gene3D G3DSA:3.40.50.2000 153 291 1.0E-16 T 22-04-2016 HMPREF9228_RS02185 f9a519a11bab41d6b6d45a441a05c1c6 355 SUPERFAMILY SSF53756 2 351 7.85E-51 T 22-04-2016 HMPREF9228_RS02185 f9a519a11bab41d6b6d45a441a05c1c6 355 Pfam PF13692 Glycosyl transferases group 1 188 319 4.0E-19 T 22-04-2016 HMPREF9228_RS02185 f9a519a11bab41d6b6d45a441a05c1c6 355 PANTHER PTHR12526 79 291 7.7E-25 T 22-04-2016 HMPREF9228_RS02185 f9a519a11bab41d6b6d45a441a05c1c6 355 Pfam PF13439 Glycosyltransferase Family 4 10 166 2.1E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain HMPREF9228_RS05885 f29ee19a2731952815f9a1034c758f1c 74 Pfam PF11305 Protein of unknown function (DUF3107) 1 72 2.3E-24 T 22-04-2016 IPR021456 Protein of unknown function DUF3107 HMPREF9228_RS06870 a4c38e52e33acf7e52e1f1cc5541045e 281 PANTHER PTHR10992 3 277 1.3E-29 T 22-04-2016 HMPREF9228_RS06870 a4c38e52e33acf7e52e1f1cc5541045e 281 Pfam PF12697 Alpha/beta hydrolase family 18 270 1.8E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 HMPREF9228_RS06870 a4c38e52e33acf7e52e1f1cc5541045e 281 PRINTS PR00412 Epoxide hydrolase signature 252 274 1.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 HMPREF9228_RS06870 a4c38e52e33acf7e52e1f1cc5541045e 281 PRINTS PR00412 Epoxide hydrolase signature 49 64 1.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 HMPREF9228_RS06870 a4c38e52e33acf7e52e1f1cc5541045e 281 PRINTS PR00412 Epoxide hydrolase signature 219 235 1.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 HMPREF9228_RS06870 a4c38e52e33acf7e52e1f1cc5541045e 281 Gene3D G3DSA:3.40.50.1820 8 278 6.5E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS06870 a4c38e52e33acf7e52e1f1cc5541045e 281 SUPERFAMILY SSF53474 8 276 2.27E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS05765 6b247724cd2aa2b7f7bce93aa71fad18 206 Pfam PF11241 Protein of unknown function (DUF3043) 28 199 1.4E-56 T 22-04-2016 IPR021403 Protein of unknown function DUF3043 HMPREF9228_RS01080 d11d1a1a7ce0e874b8413bec55a3d87f 354 PANTHER PTHR32552 30 274 7.4E-22 T 22-04-2016 HMPREF9228_RS01080 d11d1a1a7ce0e874b8413bec55a3d87f 354 Gene3D G3DSA:3.30.420.10 130 277 7.9E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS01080 d11d1a1a7ce0e874b8413bec55a3d87f 354 SUPERFAMILY SSF53098 130 260 6.26E-18 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS01080 d11d1a1a7ce0e874b8413bec55a3d87f 354 Pfam PF00665 Integrase core domain 135 251 1.1E-15 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 HMPREF9228_RS01080 d11d1a1a7ce0e874b8413bec55a3d87f 354 Pfam PF13276 HTH-like domain 52 109 1.6E-8 T 22-04-2016 IPR025948 HTH-like domain HMPREF9228_RS00285 2d71dbf37a5ec477866145f730bb781d 246 Pfam PF01694 Rhomboid family 62 203 4.1E-27 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 HMPREF9228_RS00285 2d71dbf37a5ec477866145f730bb781d 246 SUPERFAMILY SSF144091 18 205 1.7E-36 T 22-04-2016 HMPREF9228_RS00285 2d71dbf37a5ec477866145f730bb781d 246 Gene3D G3DSA:1.20.1540.10 18 201 8.6E-36 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 HMPREF9228_RS00285 2d71dbf37a5ec477866145f730bb781d 246 PANTHER PTHR22936 17 233 3.4E-32 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 HMPREF9228_RS04630 7d1a5891e2245a32a0cfebc6a208012e 157 Pfam PF01478 Type IV leader peptidase family 10 112 2.8E-4 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 Pfam PF12704 MacB-like periplasmic core domain 21 253 2.3E-10 T 22-04-2016 IPR025857 MacB-like periplasmic core domain HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 PANTHER PTHR30489:SF9 1 191 6.1E-55 T 22-04-2016 HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 PANTHER PTHR30489:SF9 598 912 6.1E-55 T 22-04-2016 HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 PANTHER PTHR30489:SF9 264 569 6.1E-55 T 22-04-2016 HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 Pfam PF02687 FtsX-like permease family 788 905 1.5E-21 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 Pfam PF02687 FtsX-like permease family 293 413 1.4E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 PANTHER PTHR30489 1 191 6.1E-55 T 22-04-2016 HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 PANTHER PTHR30489 598 912 6.1E-55 T 22-04-2016 HMPREF9228_RS05010 2956e49eabee711847f51cccc7981811 912 PANTHER PTHR30489 264 569 6.1E-55 T 22-04-2016 HMPREF9228_RS04925 b5d5aab1d1bf44afc38abc31a33f35d8 110 PANTHER PTHR37694 1 108 2.7E-20 T 22-04-2016 HMPREF9228_RS04925 b5d5aab1d1bf44afc38abc31a33f35d8 110 SUPERFAMILY SSF51182 8 105 1.25E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain HMPREF9228_RS04925 b5d5aab1d1bf44afc38abc31a33f35d8 110 Gene3D G3DSA:2.60.120.10 8 107 1.1E-25 T 22-04-2016 IPR014710 RmlC-like jelly roll fold HMPREF9228_RS03845 f73ffc8059832b8356578fe124e6d0cd 357 Pfam PF07730 Histidine kinase 137 202 1.0E-5 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 Pfam PF13424 Tetratricopeptide repeat 139 212 2.5E-11 T 22-04-2016 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 SMART SM00028 139 172 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 SMART SM00028 181 214 30.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 SMART SM00028 267 300 22.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 PANTHER PTHR19959 53 304 1.3E-17 T 22-04-2016 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 Gene3D G3DSA:1.25.40.10 102 301 4.7E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 SUPERFAMILY SSF48452 119 300 8.67E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 PANTHER PTHR19959:SF165 53 304 1.3E-17 T 22-04-2016 HMPREF9228_RS07880 3761ed4819743b6bcedf78fb7fe75d01 733 Pfam PF13228 Domain of unknown function (DUF4037) 528 630 2.7E-31 T 22-04-2016 IPR025117 Domain of unknown function DUF4037 HMPREF9228_RS09465 b286d992b448f5517a631a63f9dbecd4 690 PANTHER PTHR10110:SF120 1 690 2.6E-127 T 22-04-2016 HMPREF9228_RS09465 b286d992b448f5517a631a63f9dbecd4 690 PANTHER PTHR10110 1 690 2.6E-127 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 HMPREF9228_RS09465 b286d992b448f5517a631a63f9dbecd4 690 Pfam PF00999 Sodium/hydrogen exchanger family 7 412 4.4E-49 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 HMPREF9228_RS07465 aa128d5aa438d3c5056075165b443741 175 Pfam PF11377 Protein of unknown function (DUF3180) 16 151 4.9E-30 T 22-04-2016 IPR021517 Protein of unknown function DUF3180 HMPREF9228_RS01070 9a33dddc7fa9441935c9eb4753d913fd 104 Pfam PF13391 HNH endonuclease 5 48 2.7E-6 T 22-04-2016 IPR003615 HNH nuclease HMPREF9228_RS01180 752f101894c4cfd3ad26245cddf1c84e 340 PANTHER PTHR38658 1 67 9.2E-39 T 22-04-2016 HMPREF9228_RS01180 752f101894c4cfd3ad26245cddf1c84e 340 PANTHER PTHR38658 98 339 9.2E-39 T 22-04-2016 HMPREF9228_RS01180 752f101894c4cfd3ad26245cddf1c84e 340 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 51 330 4.3E-90 T 22-04-2016 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA HMPREF9228_RS01180 752f101894c4cfd3ad26245cddf1c84e 340 PANTHER PTHR38658:SF1 1 67 9.2E-39 T 22-04-2016 HMPREF9228_RS01180 752f101894c4cfd3ad26245cddf1c84e 340 PANTHER PTHR38658:SF1 98 339 9.2E-39 T 22-04-2016 HMPREF9228_RS00125 497ebbf002a597b70beb1135ac204ee9 735 SUPERFAMILY SSF51735 37 279 7.32E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS00125 497ebbf002a597b70beb1135ac204ee9 735 Gene3D G3DSA:3.40.50.720 126 269 3.7E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain HMPREF9228_RS03345 6d3bbd4f7c8acd681ffcf841615ff94a 77 Pfam PF11248 Protein of unknown function (DUF3046) 1 61 2.0E-25 T 22-04-2016 IPR021408 Protein of unknown function DUF3046 HMPREF9228_RS02755 1a78c1126fcf074bf5396d50f0e707e5 128 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 8 118 1.0E-54 T 22-04-2016 IPR020378 Protein of unknown function DUF4186 HMPREF9228_RS02755 1a78c1126fcf074bf5396d50f0e707e5 128 Pfam PF13811 Domain of unknown function (DUF4186) 12 119 2.5E-48 T 22-04-2016 IPR020378 Protein of unknown function DUF4186 HMPREF9228_RS07240 2b746b3a6f6c4e2a176f37f7ddae1ec3 168 PANTHER PTHR30266:SF2 4 166 3.6E-29 T 22-04-2016 HMPREF9228_RS07240 2b746b3a6f6c4e2a176f37f7ddae1ec3 168 SUPERFAMILY SSF81330 42 137 4.97E-25 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 HMPREF9228_RS07240 2b746b3a6f6c4e2a176f37f7ddae1ec3 168 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 107 115 3.6E-6 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 HMPREF9228_RS07240 2b746b3a6f6c4e2a176f37f7ddae1ec3 168 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 117 126 3.6E-6 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 HMPREF9228_RS07240 2b746b3a6f6c4e2a176f37f7ddae1ec3 168 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 35 49 3.6E-6 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 HMPREF9228_RS07240 2b746b3a6f6c4e2a176f37f7ddae1ec3 168 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 35 162 1.1E-23 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 HMPREF9228_RS07240 2b746b3a6f6c4e2a176f37f7ddae1ec3 168 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 33 161 5.9E-33 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 HMPREF9228_RS07240 2b746b3a6f6c4e2a176f37f7ddae1ec3 168 PANTHER PTHR30266 4 166 3.6E-29 T 22-04-2016 HMPREF9228_RS08815 1b1ccb9f860c4ca78bf909e46d35ca01 89 SUPERFAMILY SSF47598 7 76 9.64E-15 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 HMPREF9228_RS08815 1b1ccb9f860c4ca78bf909e46d35ca01 89 Gene3D G3DSA:1.20.5.780 6 76 4.8E-16 T 22-04-2016 HMPREF9228_RS08815 1b1ccb9f860c4ca78bf909e46d35ca01 89 Pfam PF08681 Protein of unknown function (DUF1778) 10 76 1.8E-14 T 22-04-2016 IPR014795 Vibrio phage ICP1, Orf50 HMPREF9228_RS09115 9aed11fab97c27915b250b5093ec60a7 319 Gene3D G3DSA:2.40.440.10 195 318 5.2E-21 T 22-04-2016 HMPREF9228_RS09115 9aed11fab97c27915b250b5093ec60a7 319 SUPERFAMILY SSF141523 196 318 2.22E-22 T 22-04-2016 HMPREF9228_RS09115 9aed11fab97c27915b250b5093ec60a7 319 Pfam PF03734 L,D-transpeptidase catalytic domain 200 318 1.9E-18 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 HMPREF9228_RS09115 9aed11fab97c27915b250b5093ec60a7 319 PANTHER PTHR30582 180 318 1.2E-29 T 22-04-2016 HMPREF9228_RS09115 9aed11fab97c27915b250b5093ec60a7 319 PANTHER PTHR30582:SF11 180 318 1.2E-29 T 22-04-2016 HMPREF9228_RS03930 c78d2c471a1fcfb462308264b31edce7 205 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 62 84 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 HMPREF9228_RS03930 c78d2c471a1fcfb462308264b31edce7 205 PANTHER PTHR14269 12 181 4.3E-26 T 22-04-2016 HMPREF9228_RS03930 c78d2c471a1fcfb462308264b31edce7 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 21 84 4.0E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 HMPREF9228_RS03930 c78d2c471a1fcfb462308264b31edce7 205 PIRSF PIRSF000847 16 203 5.1E-47 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 HMPREF9228_RS04175 adf2e49571486eb15f9e9f665e7e9012 82 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 3.4E-6 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 HMPREF9228_RS04175 adf2e49571486eb15f9e9f665e7e9012 82 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 3.4E-6 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 HMPREF9228_RS04175 adf2e49571486eb15f9e9f665e7e9012 82 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 3.4E-6 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 HMPREF9228_RS04175 adf2e49571486eb15f9e9f665e7e9012 82 Pfam PF03840 Preprotein translocase SecG subunit 8 75 4.7E-18 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 HMPREF9228_RS04175 adf2e49571486eb15f9e9f665e7e9012 82 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 1.4E-19 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 HMPREF9228_RS06755 f205ffa230cf751bb97cc53059e32bec 401 Pfam PF01882 Protein of unknown function DUF58 210 285 2.4E-18 T 22-04-2016 IPR002881 Domain of unknown function DUF58 HMPREF9228_RS06755 f205ffa230cf751bb97cc53059e32bec 401 PANTHER PTHR34351:SF1 53 278 3.8E-32 T 22-04-2016 HMPREF9228_RS06755 f205ffa230cf751bb97cc53059e32bec 401 PANTHER PTHR34351 53 278 3.8E-32 T 22-04-2016 HMPREF9228_RS00965 e3ed6a53a6cb0e047602d12084bb68df 178 Pfam PF04138 GtrA-like protein 2 128 5.6E-24 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 HMPREF9228_RS04350 54c640bc9f5faca47358356afd0ee6f2 245 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 31 234 1.7E-47 T 22-04-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 HMPREF9228_RS04350 54c640bc9f5faca47358356afd0ee6f2 245 Gene3D G3DSA:1.20.910.10 19 234 1.1E-66 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 HMPREF9228_RS04350 54c640bc9f5faca47358356afd0ee6f2 245 PANTHER PTHR20858 20 199 5.9E-40 T 22-04-2016 HMPREF9228_RS04350 54c640bc9f5faca47358356afd0ee6f2 245 Pfam PF03070 TENA/THI-4/PQQC family 27 234 3.5E-44 T 22-04-2016 IPR004305 Thiaminase-2/PQQC HMPREF9228_RS04350 54c640bc9f5faca47358356afd0ee6f2 245 SUPERFAMILY SSF48613 18 233 1.22E-62 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 HMPREF9228_RS02955 a02c8fcf72a81599cf00af1fcd075535 405 Pfam PF01098 Cell cycle protein 45 391 7.9E-83 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 HMPREF9228_RS02955 a02c8fcf72a81599cf00af1fcd075535 405 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 353 377 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 HMPREF9228_RS02955 a02c8fcf72a81599cf00af1fcd075535 405 PANTHER PTHR30474 43 393 1.7E-97 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 HMPREF9228_RS02955 a02c8fcf72a81599cf00af1fcd075535 405 PANTHER PTHR30474:SF2 43 393 1.7E-97 T 22-04-2016 HMPREF9228_RS02955 a02c8fcf72a81599cf00af1fcd075535 405 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 41 393 9.7E-108 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 HMPREF9228_RS01155 575b5b473159ea686321898d2c458990 720 PANTHER PTHR30294 510 714 6.0E-75 T 22-04-2016 HMPREF9228_RS01155 575b5b473159ea686321898d2c458990 720 PANTHER PTHR30294 1 201 6.0E-75 T 22-04-2016 HMPREF9228_RS01155 575b5b473159ea686321898d2c458990 720 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 495 697 3.4E-38 T 22-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal HMPREF9228_RS01155 575b5b473159ea686321898d2c458990 720 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 171 1.4E-36 T 22-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal HMPREF9228_RS01155 575b5b473159ea686321898d2c458990 720 PANTHER PTHR30294:SF4 510 714 6.0E-75 T 22-04-2016 HMPREF9228_RS01155 575b5b473159ea686321898d2c458990 720 PANTHER PTHR30294:SF4 1 201 6.0E-75 T 22-04-2016 HMPREF9228_RS01155 575b5b473159ea686321898d2c458990 720 Pfam PF12698 ABC-2 family transporter protein 23 696 1.3E-17 T 22-04-2016 HMPREF9228_RS01235 dd35a0ee7edf93a4743f0f8a1b4c8fc8 453 PANTHER PTHR11206 15 453 1.0E-74 T 22-04-2016 HMPREF9228_RS01235 dd35a0ee7edf93a4743f0f8a1b4c8fc8 453 Pfam PF01554 MatE 247 402 6.7E-9 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS01235 dd35a0ee7edf93a4743f0f8a1b4c8fc8 453 Pfam PF01554 MatE 29 188 1.8E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS01235 dd35a0ee7edf93a4743f0f8a1b4c8fc8 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 29 416 2.7E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 HMPREF9228_RS01235 dd35a0ee7edf93a4743f0f8a1b4c8fc8 453 PANTHER PTHR11206:SF94 15 453 1.0E-74 T 22-04-2016 HMPREF9228_RS04915 0ce16258347ee9995a06fa555fa387ac 81 Pfam PF04221 RelB antitoxin 5 57 1.5E-7 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ HMPREF9228_RS03330 67f039ca3e6f500529e289c4bd03ef34 211 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 19 204 1.5E-41 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 HMPREF9228_RS03330 67f039ca3e6f500529e289c4bd03ef34 211 PIRSF PIRSF000847 16 211 1.8E-46 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 HMPREF9228_RS03330 67f039ca3e6f500529e289c4bd03ef34 211 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 HMPREF9228_RS03330 67f039ca3e6f500529e289c4bd03ef34 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 19 90 7.1E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 HMPREF9228_RS03330 67f039ca3e6f500529e289c4bd03ef34 211 PANTHER PTHR14269 19 205 9.6E-34 T 22-04-2016 HMPREF9228_RS01980 7383ded95fc579069c3411503a5cdb34 93 Pfam PF11238 Protein of unknown function (DUF3039) 37 91 9.2E-31 T 22-04-2016 IPR021400 Protein of unknown function DUF3039 HMPREF9228_RS07375 b4fed1590ac1a354c53a88faa9f0b9b2 307 PANTHER PTHR11795 6 307 4.3E-113 T 22-04-2016 HMPREF9228_RS07375 b4fed1590ac1a354c53a88faa9f0b9b2 307 PANTHER PTHR11795:SF371 6 307 4.3E-113 T 22-04-2016 HMPREF9228_RS07375 b4fed1590ac1a354c53a88faa9f0b9b2 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 291 1.7E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS04730 fffadfad3ada4d8318f0ec7e066fe5f9 453 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 434 1.1E-92 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 HMPREF9228_RS04730 fffadfad3ada4d8318f0ec7e066fe5f9 453 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 351 371 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 HMPREF9228_RS04730 fffadfad3ada4d8318f0ec7e066fe5f9 453 TIGRFAM TIGR03173 pbuX: xanthine permease 30 436 6.4E-134 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 HMPREF9228_RS04730 fffadfad3ada4d8318f0ec7e066fe5f9 453 PANTHER PTHR11119 18 436 3.8E-70 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS04730 fffadfad3ada4d8318f0ec7e066fe5f9 453 Pfam PF00860 Permease family 28 402 3.5E-81 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 HMPREF9228_RS04905 2aaf81a20f2d265acedbff4dfbb95ab6 63 Gene3D G3DSA:1.10.260.40 4 46 4.0E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS04905 2aaf81a20f2d265acedbff4dfbb95ab6 63 SUPERFAMILY SSF47413 3 49 3.77E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS08605 d84c1b6316d4c7018c39381110e6bca6 433 PANTHER PTHR23519 11 426 5.3E-68 T 22-04-2016 HMPREF9228_RS08605 d84c1b6316d4c7018c39381110e6bca6 433 Gene3D G3DSA:1.20.1250.20 47 210 2.0E-6 T 22-04-2016 HMPREF9228_RS08605 d84c1b6316d4c7018c39381110e6bca6 433 Gene3D G3DSA:1.20.1250.20 249 430 1.5E-20 T 22-04-2016 HMPREF9228_RS08605 d84c1b6316d4c7018c39381110e6bca6 433 Pfam PF11700 Vacuole effluxer Atg22 like 66 426 2.9E-41 T 22-04-2016 IPR024671 Autophagy-related protein 22-like HMPREF9228_RS08605 d84c1b6316d4c7018c39381110e6bca6 433 SUPERFAMILY SSF103473 47 428 1.83E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain HMPREF9228_RS04670 1e67e0dd1a02804995d8b01629c1104d 97 Pfam PF04221 RelB antitoxin 12 53 1.0E-6 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ HMPREF9228_RS06170 5a5a6b2eaeae859342108c7ddf6cef12 354 Pfam PF03601 Conserved hypothetical protein 698 22 334 4.1E-64 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 HMPREF9228_RS05860 97ddc3f75c50853a80646b3fde9cfffd 138 Pfam PF11253 Protein of unknown function (DUF3052) 9 132 5.7E-48 T 22-04-2016 IPR021412 Protein of unknown function DUF3052 HMPREF9228_RS09660 9c48fce764edfb48687e013a703c27c5 216 SMART SM00530 155 213 2.1E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS09660 9c48fce764edfb48687e013a703c27c5 216 Pfam PF01381 Helix-turn-helix 158 213 3.6E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 HMPREF9228_RS09660 9c48fce764edfb48687e013a703c27c5 216 SUPERFAMILY SSF47413 154 215 6.17E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS09660 9c48fce764edfb48687e013a703c27c5 216 Gene3D G3DSA:1.10.260.40 154 215 6.6E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 HMPREF9228_RS01125 fac6f794b56bd1a220a1ebd1477748a7 422 Pfam PF10080 Predicted membrane protein (DUF2318) 321 421 3.5E-31 T 22-04-2016 IPR018758 Domain of unknown function DUF2318, membrane HMPREF9228_RS06180 df71c242bc6dc33ef5a8d690393e5322 243 Pfam PF14335 Domain of unknown function (DUF4391) 18 237 2.7E-38 T 22-04-2016 IPR025503 Protein of unknown function DUF4391 HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 PANTHER PTHR18966:SF191 64 300 6.3E-36 T 22-04-2016 HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 SMART SM00062 77 304 1.2E-36 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 PANTHER PTHR18966 64 300 6.3E-36 T 22-04-2016 HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 78 301 5.6E-52 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 Gene3D G3DSA:3.40.190.10 154 260 9.6E-19 T 22-04-2016 HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 SUPERFAMILY SSF53850 12 27 2.08E-53 T 22-04-2016 HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 SUPERFAMILY SSF53850 69 301 2.08E-53 T 22-04-2016 HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 Gene3D G3DSA:3.40.190.10 263 301 2.6E-30 T 22-04-2016 HMPREF9228_RS06665 92f4f5905be161e345d2bee307059cc2 317 Gene3D G3DSA:3.40.190.10 75 153 2.6E-30 T 22-04-2016 HMPREF9228_RS01675 38f85fe0d6c7848c239a85fe4a74759f 345 Pfam PF02517 CAAX protease self-immunity 150 236 3.8E-19 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 HMPREF9228_RS01675 38f85fe0d6c7848c239a85fe4a74759f 345 PANTHER PTHR10794 158 236 8.7E-12 T 22-04-2016 HMPREF9228_RS03260 92cfade03e1bc401295eaa4d5b0b6807 258 PIRSF PIRSF010219 1 235 2.4E-90 T 22-04-2016 IPR016566 Uncharacterised conserved protein UCP010219 HMPREF9228_RS03260 92cfade03e1bc401295eaa4d5b0b6807 258 Pfam PF11361 Protein of unknown function (DUF3159) 28 222 3.5E-66 T 22-04-2016 IPR016566 Uncharacterised conserved protein UCP010219 HMPREF9228_RS02300 10258e0def544bfbd25fb8641f1478ab 769 PANTHER PTHR30580 26 769 6.0E-48 T 22-04-2016 HMPREF9228_RS09490 d59d24168df2f8a3b9a2a58764a8f504 459 Gene3D G3DSA:1.20.5.420 340 405 2.9E-4 T 22-04-2016 HMPREF9228_RS00660 b5c3b68b2e87df8f7ef34e801539d66d 95 Pfam PF14029 Protein of unknown function (DUF4244) 42 93 1.4E-20 T 22-04-2016 IPR025338 Protein of unknown function DUF4244 HMPREF9228_RS00665 5aa8577b818e1b4b8aff3dc97b2e3b70 125 TIGRFAM TIGR03816 tadE_like_DECH: helicase/secretion neighborhood TadE-like protein 8 115 7.8E-24 T 22-04-2016 IPR021202 Helicase/secretion neighbourhood TadE-like protein HMPREF9228_RS07630 ee24ca0256f5527fb91be6e5077501b8 791 SUPERFAMILY SSF52540 404 768 5.19E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07630 ee24ca0256f5527fb91be6e5077501b8 791 Gene3D G3DSA:3.40.50.300 613 741 3.7E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS07630 ee24ca0256f5527fb91be6e5077501b8 791 Gene3D G3DSA:3.40.50.300 424 512 3.7E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase HMPREF9228_RS02140 bf0c6605de3773dda227dcd24299b724 586 Pfam PF13196 Protein of unknown function (DUF4012) 203 351 6.6E-42 T 22-04-2016 IPR025101 Protein of unknown function DUF4012 HMPREF9228_RS03425 c666dd259a8c60a7af85afdcaafdb5e3 319 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 29 95 1.8E-7 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin HMPREF9228_RS09785 a3ab4ea67295dd02275ef0551f2c4dc4 243 Pfam PF01610 Transposase 2 105 4.7E-21 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain HMPREF9228_RS06070 38385b7eb8f28ceda20e3cbae403c725 413 PANTHER PTHR15108 4 411 2.5E-54 T 22-04-2016 HMPREF9228_RS06070 38385b7eb8f28ceda20e3cbae403c725 413 SUPERFAMILY SSF48208 16 409 2.58E-105 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 HMPREF9228_RS06070 38385b7eb8f28ceda20e3cbae403c725 413 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 38 391 1.1E-112 T 22-04-2016 HMPREF9228_RS06070 38385b7eb8f28ceda20e3cbae403c725 413 Gene3D G3DSA:1.50.10.10 16 397 9.7E-97 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 HMPREF9228_RS07975 7e87df1b2f8bea253ef1cce60c69e15b 355 PANTHER PTHR37044 193 334 5.3E-21 T 22-04-2016 HMPREF9228_RS05835 d417f5b0fbc60e0700548255dd63ecd2 570 Gene3D G3DSA:3.40.50.1820 89 334 2.2E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS05835 d417f5b0fbc60e0700548255dd63ecd2 570 SUPERFAMILY SSF53474 89 339 1.73E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold HMPREF9228_RS04780 b5b27930d158fc8223f1755bcbf11978 176 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 79 125 2.1E-12 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 HMPREF9228_RS04780 b5b27930d158fc8223f1755bcbf11978 176 Pfam PF12728 Helix-turn-helix domain 79 126 5.7E-13 T 22-04-2016 HMPREF9228_RS04780 b5b27930d158fc8223f1755bcbf11978 176 Gene3D G3DSA:1.10.10.60 82 101 3.1E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 HMPREF9228_RS04780 b5b27930d158fc8223f1755bcbf11978 176 SUPERFAMILY SSF46955 79 125 5.86E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain HMPREF9228_RS01405 f6b9955af4f371b74ecb75b505a57fa6 320 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 31 105 1.8E-6 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin HMPREF9228_RS07625 34022621329050d97263f17d9c7ab9fd 127 Pfam PF12666 PrgI family protein 6 91 1.4E-14 T 22-04-2016 IPR024414 Uncharacterised protein family PrgI HMPREF9228_RS08610 0fad021dfd7accdbe61a4bf32e17778e 162 Gene3D G3DSA:2.20.28.30 116 154 7.2E-4 T 22-04-2016 IPR006591 RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4 GO:0003677|GO:0003899|GO:0006351 HMPREF9228_RS00700 195f1897f794eaae21cf66f2f1f1d3b4 336 Pfam PF02486 Replication initiation factor 90 284 5.3E-47 T 22-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 HMPREF9228_RS06945 389123ea739f8fffdd0705ce0a536ec8 321 Pfam PF00589 Phage integrase family 130 297 2.6E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS06945 389123ea739f8fffdd0705ce0a536ec8 321 PANTHER PTHR30349 36 313 5.5E-18 T 22-04-2016 HMPREF9228_RS06945 389123ea739f8fffdd0705ce0a536ec8 321 SUPERFAMILY SSF56349 16 299 2.94E-31 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 HMPREF9228_RS06945 389123ea739f8fffdd0705ce0a536ec8 321 Gene3D G3DSA:1.10.443.10 113 299 1.6E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 HMPREF9228_RS08895 09aea11e4c97e3a98c01a8de52885b57 184 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 26 162 3.3E-20 T 22-04-2016 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase HMPREF9228_RS05895 1a9b3c37b8835c033dced11d9870d3b4 239 SMART SM00756 29 175 4.7E-45 T 22-04-2016 IPR012932 Vitamin K epoxide reductase HMPREF9228_RS05895 1a9b3c37b8835c033dced11d9870d3b4 239 Pfam PF07884 Vitamin K epoxide reductase family 35 169 3.2E-24 T 22-04-2016 IPR012932 Vitamin K epoxide reductase HMPREF9228_RS01085 56deb35b1a6c656aa128eb85ba1e2f49 305 Pfam PF16280 Domain of unknown function (DUF4928) 25 302 2.1E-54 T 22-04-2016 IPR032564 Protein of unknown function DUF4928 HMPREF9228_RS00290 d99f83a98062148ac8bbc72560c895e7 155 Pfam PF06781 Uncharacterised protein family (UPF0233) 73 155 6.8E-28 T 22-04-2016 IPR009619 Cell division protein CrgA HMPREF9228_RS00290 d99f83a98062148ac8bbc72560c895e7 155 Hamap MF_00631 Cell division protein CrgA [crgA]. 77 155 24.193 T 22-04-2016 IPR009619 Cell division protein CrgA HMPREF9228_RS07370 165ab68f0bf04ff42babfa6999b325a9 362 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 309 9.8E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 HMPREF9228_RS07370 165ab68f0bf04ff42babfa6999b325a9 362 PANTHER PTHR30482 19 348 1.1E-97 T 22-04-2016 HMPREF9228_RS07370 165ab68f0bf04ff42babfa6999b325a9 362 PANTHER PTHR30482:SF10 19 348 1.1E-97 T 22-04-2016 HMPREF9228_RS01020 e7de3b3df09aa33689fdd73d51972072 109 Pfam PF01638 HxlR-like helix-turn-helix 18 105 9.9E-36 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type HMPREF9228_RS01020 e7de3b3df09aa33689fdd73d51972072 109 SUPERFAMILY SSF46785 9 106 7.1E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS01020 e7de3b3df09aa33689fdd73d51972072 109 Gene3D G3DSA:1.10.10.10 8 106 2.0E-46 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain HMPREF9228_RS02725 ad1e9cd04eb564863893907cefc2134a 100 Pfam PF02325 YGGT family 15 96 6.8E-15 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 HMPREF9228_RS09600 bb8bdffeb5faf972f8943f4ef8c43a86 459 PANTHER PTHR33843 1 458 1.5E-201 T 22-04-2016 HMPREF9228_RS09600 bb8bdffeb5faf972f8943f4ef8c43a86 459 Pfam PF03611 PTS system sugar-specific permease component 10 409 3.2E-133 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 HMPREF9228_RS09600 bb8bdffeb5faf972f8943f4ef8c43a86 459 PANTHER PTHR33843:SF4 1 458 1.5E-201 T 22-04-2016 HMPREF9228_RS04715 cdf2e75b57db8840fdbcb226cb5f3b86 131 Pfam PF14387 Domain of unknown function (DUF4418) 12 124 1.4E-32 T 22-04-2016 IPR025531 Protein of unknown function DUF4418 HMPREF9228_RS05130 2c529f4f56e0b4e6d4f8c6778ebb41fe 210 Pfam PF11452 Protein of unknown function (DUF3000) 24 200 6.0E-21 T 22-04-2016 IPR021555 Protein of unknown function DUF3000 HMPREF9228_RS05485 a0eebefce1b3f802bc503a0b33342bf8 194 Pfam PF04977 Septum formation initiator 39 114 3.0E-16 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 HMPREF9228_RS06250 194d436b2383eb8c9084a90d8ece3752 456 SUPERFAMILY SSF52777 27 144 2.45E-5 T 22-04-2016 HMPREF9228_RS00820 1e0c67ea10ff3afbed441bf2586d1fa9 302 Pfam PF16154 Domain of unknown function (DUF4862) 5 292 6.0E-110 T 22-04-2016 IPR032344 Protein of unknown function DUF4862 HMPREF9228_RS00820 1e0c67ea10ff3afbed441bf2586d1fa9 302 SUPERFAMILY SSF51658 77 269 6.21E-6 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain HMPREF9228_RS01315 e111454ad6c7098540724348e3c2c16d 78 Pfam PF01610 Transposase 30 59 7.7E-7 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain HMPREF9228_RS06855 85f16315f2bcdba987cabd3bb874722e 403 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 257 353 1.0E-30 T 22-04-2016 IPR019236 Domain of unknown function DUF2183 HMPREF9228_RS06855 85f16315f2bcdba987cabd3bb874722e 403 PANTHER PTHR28208 199 359 3.4E-43 T 22-04-2016 HMPREF9228_RS09365 0fb5299a66e949a488a30c8f772a02c6 125 Pfam PF14019 Protein of unknown function (DUF4235) 43 120 4.8E-15 T 22-04-2016 IPR025329 Protein of unknown function DUF4235 HMPREF9228_RS09335 aadb00645c0b7c518493e80be63c1c6b 201 Pfam PF04854 Protein of unknown function, DUF624 21 90 4.3E-13 T 22-04-2016 IPR006938 Protein of unknown function DUF624 HMPREF9228_RS08805 e1599b0672bb707137e7dbd28f775a63 482 Pfam PF02687 FtsX-like permease family 96 212 8.8E-6 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS04800 6ce93fd196badd90b4e0af603208e74b 415 Pfam PF12698 ABC-2 family transporter protein 19 404 1.5E-38 T 22-04-2016 HMPREF9228_RS08910 c4a774dc861f4456ee86f560b0dd5e74 165 Pfam PF05656 Protein of unknown function (DUF805) 8 99 1.4E-17 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 HMPREF9228_RS09730 9c93e8af85332c78011483ab31850b98 1256 Pfam PF03023 MviN-like protein 31 488 6.7E-56 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ HMPREF9228_RS03775 a784a1e54eeb2d5bae2739c616d0b812 120 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 49 106 6.0E-10 T 22-04-2016 IPR009706 Protein of unknown function DUF1287 HMPREF9228_RS03775 a784a1e54eeb2d5bae2739c616d0b812 120 Pfam PF06940 Domain of unknown function (DUF1287) 44 106 2.0E-17 T 22-04-2016 IPR009706 Protein of unknown function DUF1287 HMPREF9228_RS07645 7a9af14cf05bf87054c97fc106f2994a 219 Gene3D G3DSA:3.30.1180.20 20 76 5.7E-4 T 22-04-2016 HMPREF9228_RS07775 6874ebdd75190b5730293af0178c0463 47 Gene3D G3DSA:3.30.420.10 8 47 3.3E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07775 6874ebdd75190b5730293af0178c0463 47 SUPERFAMILY SSF53098 10 46 4.93E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 HMPREF9228_RS07780 5bfb8c03d9bfcacf7541ad215305bbd0 455 Pfam PF02687 FtsX-like permease family 305 448 1.8E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS03255 7f22db12725b2d14ec1e0071a755885d 281 Pfam PF12502 Protein of unknown function (DUF3710) 60 231 5.7E-52 T 22-04-2016 IPR022183 Protein of unknown function DUF3710 HMPREF9228_RS00250 b6fa5360e212a4b3d1c4d2108d90a7b0 128 Pfam PF11273 Protein of unknown function (DUF3073) 2 85 1.1E-23 T 22-04-2016 IPR021426 Protein of unknown function DUF3073 HMPREF9228_RS06260 d20b2684ba74293dd272a9e618629c90 270 Gene3D G3DSA:1.10.1510.10 30 77 4.5E-4 T 22-04-2016 HMPREF9228_RS07690 06cdb661a5eaaad41dcaa9ba7dd7aa2a 476 Pfam PF03432 Relaxase/Mobilisation nuclease domain 12 253 6.9E-35 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 HMPREF9228_RS08210 f6e8dd462a7e71a93d47339a331f9b1d 298 Pfam PF14256 YwiC-like protein 15 137 7.2E-30 T 22-04-2016 IPR025576 YwiC-like protein HMPREF9228_RS09320 2c2f59dff0695f6d9099505e4f9ac815 1220 Pfam PF02687 FtsX-like permease family 1095 1201 9.1E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 HMPREF9228_RS09710 fffa58a04454b760f047427524ac6520 209 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 82 166 1.3E-13 T 22-04-2016 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain HMPREF9228_RS04795 7196bf02247c8bf875cd1549bbe58ec9 479 Pfam PF12698 ABC-2 family transporter protein 19 457 1.8E-21 T 22-04-2016 HMPREF9228_RS09055 04f5036f61d0165d3eb257fe90cc80b1 448 Pfam PF09913 Predicted membrane protein (DUF2142) 29 427 9.3E-32 T 22-04-2016 IPR018674 Protein of unknown function DUF2142, membrane HMPREF9228_RS07670 48e29981b552efaed39fa57a906a50ef 382 Pfam PF07275 Antirestriction protein (ArdA) 11 206 1.3E-18 T 22-04-2016 IPR009899 Antirestriction