RY69_RS00020	SM00650	Ribosomal RNA adenine dimethylases
RY69_RS00050	SM00836	DALR anticodon binding domain
RY69_RS00050	SM01016	Arginyl tRNA synthetase N terminal dom
RY69_RS00095	SM00382	ATPases associated with a variety of cellular activities
RY69_RS00105	SM00354	helix_turn _helix lactose operon repressor
RY69_RS00110	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RY69_RS00130	SM01130	RY69_RS00130
RY69_RS00145	SM00316	Ribosomal protein S1-like RNA-binding domain
RY69_RS00165	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RY69_RS00190	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RY69_RS00200	SM00649	Ribosomal protein L11/L12
RY69_RS00230	SM00878	Biotin carboxylase C-terminal domain
RY69_RS00240	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RY69_RS00285	SM00530	Helix-turn-helix XRE-family like proteins 
RY69_RS00325	SM00487	DEAD-like helicases superfamily
RY69_RS00325	SM00490	helicase superfamily c-terminal domain
RY69_RS00390	SM00387	Histidine kinase-like ATPases
RY69_RS00390	SM00388	His Kinase A (phosphoacceptor) domain
RY69_RS00395	SM00448	cheY-homologous receiver domain
RY69_RS00395	SM00862	Transcriptional regulatory protein, C terminal
RY69_RS00415	SM00382	ATPases associated with a variety of cellular activities
RY69_RS00455	SM00858	RY69_RS00455
RY69_RS00460	SM00834	Putative regulatory protein
RY69_RS00475	SM00883	Chaperonin 10 Kd subunit
RY69_RS00535	SM00354	helix_turn _helix lactose operon repressor
RY69_RS00560	SM00854	Bacterial capsule synthesis protein PGA_cap
RY69_RS00595	SM00642	Alpha-amylase domain
RY69_RS00600	SM00829	Enoylreductase
RY69_RS00625	SM00829	Enoylreductase
RY69_RS00630	SM00342	helix_turn_helix, arabinose operon control protein
RY69_RS00650	SM01403	RY69_RS00650
RY69_RS00670	SM01382	RY69_RS00670
RY69_RS00670	SM01383	RY69_RS00670
RY69_RS00685	SM00322	K homology RNA-binding domain
RY69_RS00705	SM01374	RY69_RS00705
RY69_RS00710	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RY69_RS00785	SM00662	RNA polymerases D
RY69_RS00805	SM00460	Transglutaminase/protease-like homologues
RY69_RS00825	SM00322	K homology RNA-binding domain
RY69_RS00845	SM00904	Riboflavin kinase
RY69_RS00850	SM00382	ATPases associated with a variety of cellular activities
RY69_RS00895	SM01061	CAT RNA binding domain
RY69_RS00900	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RY69_RS00945	SM00421	helix_turn_helix, Lux Regulon
RY69_RS00945	SM00448	cheY-homologous receiver domain
RY69_RS00975	SM00028	Tetratricopeptide repeats
RY69_RS01000	SM00855	Phosphoglycerate mutase family
RY69_RS01010	SM00387	Histidine kinase-like ATPases
RY69_RS01060	SM00226	Low molecular weight phosphatase family
RY69_RS01070	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01110	SM00354	helix_turn _helix lactose operon repressor
RY69_RS01115	SM01038	Beta galactosidase small chain
RY69_RS01210	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01230	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01275	SM00387	Histidine kinase-like ATPases
RY69_RS01275	SM00388	His Kinase A (phosphoacceptor) domain
RY69_RS01280	SM00448	cheY-homologous receiver domain
RY69_RS01280	SM00862	Transcriptional regulatory protein, C terminal
RY69_RS01300	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01310	SM00354	helix_turn _helix lactose operon repressor
RY69_RS01315	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01340	SM01260	RY69_RS01340
RY69_RS01455	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01480	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01495	SM00905	Dihydroneopterin aldolase
RY69_RS01510	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01535	SM00347	helix_turn_helix multiple antibiotic resistance protein
RY69_RS01575	SM00937	RY69_RS01575
RY69_RS01600	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01605	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01620	SM00116	Domain in cystathionine beta-synthase and other proteins.
RY69_RS01620	SM01240	RY69_RS01620
RY69_RS01625	SM00487	DEAD-like helicases superfamily
RY69_RS01625	SM00490	helicase superfamily c-terminal domain
RY69_RS01640	SM00857	Resolvase, N terminal domain
RY69_RS01655	SM00354	helix_turn _helix lactose operon repressor
RY69_RS01660	SM00479	RY69_RS01660
RY69_RS01665	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01710	SM00487	DEAD-like helicases superfamily
RY69_RS01710	SM00490	helicase superfamily c-terminal domain
RY69_RS01805	SM01217	RY69_RS01805
RY69_RS01840	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
RY69_RS01855	SM01217	RY69_RS01855
RY69_RS01860	SM00347	helix_turn_helix multiple antibiotic resistance protein
RY69_RS01865	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01870	SM00382	ATPases associated with a variety of cellular activities
RY69_RS01875	SM00354	helix_turn _helix lactose operon repressor
RY69_RS01920	SM01409	RY69_RS01920
RY69_RS01955	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02015	SM00411	bacterial (prokaryotic) histone like domain
RY69_RS02075	SM00986	Uracil DNA glycosylase superfamily
RY69_RS02075	SM00987	UreE urease accessory protein, C-terminal domain 
RY69_RS02085	SM00357	Cold shock protein domain
RY69_RS02105	SM00448	cheY-homologous receiver domain
RY69_RS02105	SM00862	Transcriptional regulatory protein, C terminal
RY69_RS02110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RY69_RS02110	SM00387	Histidine kinase-like ATPases
RY69_RS02110	SM00388	His Kinase A (phosphoacceptor) domain
RY69_RS02115	SM00357	Cold shock protein domain
RY69_RS02130	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02130	SM01086	C-terminal, D2-small domain, of ClpB protein
RY69_RS02135	SM00342	helix_turn_helix, arabinose operon control protein
RY69_RS02175	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02180	SM00062	Bacterial periplasmic substrate-binding proteins
RY69_RS02180	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RY69_RS02205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RY69_RS02215	SM00487	DEAD-like helicases superfamily
RY69_RS02215	SM00490	helicase superfamily c-terminal domain
RY69_RS02220	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02250	SM01103	RY69_RS02250
RY69_RS02255	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02280	SM00640	Glycosyl hydrolases family 32
RY69_RS02290	SM00354	helix_turn _helix lactose operon repressor
RY69_RS02295	SM00093	SERine  Proteinase INhibitors
RY69_RS02305	SM00421	helix_turn_helix, Lux Regulon
RY69_RS02305	SM00448	cheY-homologous receiver domain
RY69_RS02330	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02355	SM00864	Tubulin/FtsZ family, GTPase domain
RY69_RS02355	SM00865	Tubulin/FtsZ family, C-terminal domain
RY69_RS02390	SM00481	DNA polymerase alpha chain like domain
RY69_RS02425	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RY69_RS02440	SM01130	RY69_RS02440
RY69_RS02450	SM00812	Alpha-L-fucosidase
RY69_RS02505	SM01230	RY69_RS02505
RY69_RS02515	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02515	SM00487	DEAD-like helicases superfamily
RY69_RS02515	SM00490	helicase superfamily c-terminal domain
RY69_RS02515	SM00847	Helicase associated domain (HA2)  Add an annotation
RY69_RS02545	SM00257	Lysin motif
RY69_RS02665	SM01011	Aminopeptidase P, N-terminal domain
RY69_RS02725	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RY69_RS02810	SM00838	Elongation factor G C-terminus
RY69_RS02855	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02915	SM00954	Region found in RelA / SpoT proteins
RY69_RS02920	SM00729	Elongator protein 3, MiaB family, Radical SAM
RY69_RS02935	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02935	SM00843	RY69_RS02935
RY69_RS02950	SM00530	Helix-turn-helix XRE-family like proteins 
RY69_RS02960	SM00382	ATPases associated with a variety of cellular activities
RY69_RS02980	SM00957	SecA DEAD-like domain
RY69_RS02980	SM00958	SecA preprotein cross-linking domain
RY69_RS02995	SM00563	Phosphate acyltransferases
RY69_RS03000	SM00220	Serine/Threonine protein kinases, catalytic domain
RY69_RS03000	SM00740	RY69_RS03000
RY69_RS03020	SM00387	Histidine kinase-like ATPases
RY69_RS03020	SM00433	TopoisomeraseII
RY69_RS03035	SM00487	DEAD-like helicases superfamily
RY69_RS03035	SM00490	helicase superfamily c-terminal domain
RY69_RS03050	SM00434	DNA Topoisomerase IV
RY69_RS03075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RY69_RS03075	SM00954	Region found in RelA / SpoT proteins
RY69_RS03110	SM00857	Resolvase, N terminal domain
RY69_RS03115	SM00857	Resolvase, N terminal domain
RY69_RS03130	SM00644	RY69_RS03130
RY69_RS03130	SM01095	Cpl-7 lysozyme C-terminal domain
RY69_RS03210	SM00382	ATPases associated with a variety of cellular activities
RY69_RS03260	SM00382	ATPases associated with a variety of cellular activities
RY69_RS03265	SM00872	Alpha mannosidase, middle domain
RY69_RS03270	SM00872	Alpha mannosidase, middle domain
RY69_RS03295	SM00354	helix_turn _helix lactose operon repressor
RY69_RS03305	SM01149	RY69_RS03305
RY69_RS03335	SM00855	Phosphoglycerate mutase family
RY69_RS03345	SM00062	Bacterial periplasmic substrate-binding proteins
RY69_RS03355	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RY69_RS03585	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RY69_RS03585	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RY69_RS03585	SM00493	RY69_RS03585
RY69_RS03670	SM01329	RY69_RS03670
RY69_RS03675	SM01240	RY69_RS03675
RY69_RS03720	SM00729	Elongator protein 3, MiaB family, Radical SAM
RY69_RS03810	SM00382	ATPases associated with a variety of cellular activities
RY69_RS03850	SM00382	ATPases associated with a variety of cellular activities
RY69_RS03895	SM00382	ATPases associated with a variety of cellular activities
RY69_RS03910	SM00421	helix_turn_helix, Lux Regulon
RY69_RS03910	SM00448	cheY-homologous receiver domain
RY69_RS03970	SM00518	AP endonuclease family 2
RY69_RS04030	SM00240	Forkhead associated domain
RY69_RS04035	SM00422	helix_turn_helix, mercury resistance
RY69_RS04060	SM00487	DEAD-like helicases superfamily
RY69_RS04060	SM00490	helicase superfamily c-terminal domain
RY69_RS04060	SM01142	RY69_RS04060
RY69_RS04090	SM00382	ATPases associated with a variety of cellular activities
RY69_RS04095	SM00363	S4 RNA-binding domain
RY69_RS04105	SM00798	AICARFT/IMPCHase bienzyme
RY69_RS04105	SM00851	MGS-like domain
RY69_RS04115	SM00881	CoA binding domain
RY69_RS04130	SM01323	RY69_RS04130
RY69_RS04135	SM00382	ATPases associated with a variety of cellular activities
RY69_RS04140	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RY69_RS04160	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RY69_RS04285	SM00470	ParB-like nuclease domain
RY69_RS04445	SM00382	ATPases associated with a variety of cellular activities
RY69_RS04470	SM00271	DnaJ molecular chaperone homology domain
RY69_RS04480	SM00861	Transketolase, pyrimidine binding domain
RY69_RS04545	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RY69_RS04545	SM00465	GIY-YIG type nucleases (URI domain)
RY69_RS04570	SM00382	ATPases associated with a variety of cellular activities
RY69_RS04615	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RY69_RS04655	SM00855	Phosphoglycerate mutase family
RY69_RS04685	SM00506	Appr-1"-p processing enzyme
RY69_RS04785	SM00382	ATPases associated with a variety of cellular activities
RY69_RS04825	SM00354	helix_turn _helix lactose operon repressor
RY69_RS04830	SM00729	Elongator protein 3, MiaB family, Radical SAM
RY69_RS04835	SM00838	Elongation factor G C-terminus
RY69_RS04880	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RY69_RS04880	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RY69_RS04895	SM00116	Domain in cystathionine beta-synthase and other proteins.
RY69_RS04895	SM01091	Transporter associated domain
RY69_RS04950	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05000	SM00732	Likely ribonuclease with RNase H fold.
RY69_RS05005	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RY69_RS05020	SM00855	Phosphoglycerate mutase family
RY69_RS05120	SM00460	Transglutaminase/protease-like homologues
RY69_RS05140	SM00363	S4 RNA-binding domain
RY69_RS05140	SM01390	RY69_RS05140
RY69_RS05145	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05175	SM00530	Helix-turn-helix XRE-family like proteins 
RY69_RS05230	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05245	SM00421	helix_turn_helix, Lux Regulon
RY69_RS05245	SM00448	cheY-homologous receiver domain
RY69_RS05260	SM00642	Alpha-amylase domain
RY69_RS05265	SM00487	DEAD-like helicases superfamily
RY69_RS05265	SM00490	helicase superfamily c-terminal domain
RY69_RS05275	SM00855	Phosphoglycerate mutase family
RY69_RS05360	SM00116	Domain in cystathionine beta-synthase and other proteins.
RY69_RS05450	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05455	SM00062	Bacterial periplasmic substrate-binding proteins
RY69_RS05475	SM00421	helix_turn_helix, Lux Regulon
RY69_RS05475	SM00448	cheY-homologous receiver domain
RY69_RS05485	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05515	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05565	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05565	SM00994	ClpX C4-type zinc finger
RY69_RS05565	SM01086	C-terminal, D2-small domain, of ClpB protein
RY69_RS05595	SM00474	3'-5' exonuclease
RY69_RS05635	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05660	SM00855	Phosphoglycerate mutase family
RY69_RS05690	SM01400	RY69_RS05690
RY69_RS05740	SM00641	Glycosyl hydrolases family 25
RY69_RS05740	SM01095	Cpl-7 lysozyme C-terminal domain
RY69_RS05790	SM00530	Helix-turn-helix XRE-family like proteins 
RY69_RS05800	SM00642	Alpha-amylase domain
RY69_RS05815	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RY69_RS05815	SM00475	5'-3' exonuclease
RY69_RS05815	SM00482	DNA polymerase A domain
RY69_RS05820	SM00448	cheY-homologous receiver domain
RY69_RS05820	SM01012	RY69_RS05820
RY69_RS05845	SM00487	DEAD-like helicases superfamily
RY69_RS05845	SM00490	helicase superfamily c-terminal domain
RY69_RS05855	SM00316	Ribosomal protein S1-like RNA-binding domain
RY69_RS05870	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05885	SM01058	CarD-like/TRCF domain
RY69_RS05890	SM00642	Alpha-amylase domain
RY69_RS05895	SM00448	cheY-homologous receiver domain
RY69_RS05895	SM00862	Transcriptional regulatory protein, C terminal
RY69_RS05900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RY69_RS05900	SM00387	Histidine kinase-like ATPases
RY69_RS05900	SM00388	His Kinase A (phosphoacceptor) domain
RY69_RS05945	SM00382	ATPases associated with a variety of cellular activities
RY69_RS05955	SM00387	Histidine kinase-like ATPases
RY69_RS06005	SM01192	RY69_RS06005
RY69_RS06005	SM01193	RY69_RS06005
RY69_RS06015	SM00487	DEAD-like helicases superfamily
RY69_RS06015	SM00490	helicase superfamily c-terminal domain
RY69_RS06015	SM00982	RY69_RS06015
RY69_RS06015	SM01058	CarD-like/TRCF domain
RY69_RS06070	SM00382	ATPases associated with a variety of cellular activities
RY69_RS06075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RY69_RS06110	SM00363	S4 RNA-binding domain
RY69_RS06135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RY69_RS06140	SM00450	Rhodanese Homology Domain
RY69_RS06195	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RY69_RS06205	SM00873	B3/4 domain
RY69_RS06205	SM00874	tRNA synthetase B5 domain
RY69_RS06205	SM00896	Ferredoxin-fold anticodon binding domain
RY69_RS06225	SM00382	ATPases associated with a variety of cellular activities
RY69_RS06255	SM01230	RY69_RS06255
RY69_RS06265	SM00292	breast cancer carboxy-terminal domain
RY69_RS06265	SM00532	Ligase N family
RY69_RS06285	SM00382	ATPases associated with a variety of cellular activities
RY69_RS06370	SM00481	DNA polymerase alpha chain like domain
RY69_RS06375	SM00756	RY69_RS06375
RY69_RS06400	SM00244	prohibitin homologues
RY69_RS06420	SM00838	Elongation factor G C-terminus
RY69_RS06420	SM00889	Elongation factor G, domain IV
RY69_RS06430	SM00479	RY69_RS06430
RY69_RS06435	SM00072	Guanylate kinase homologues.
RY69_RS06440	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RY69_RS06445	SM00851	MGS-like domain
RY69_RS06445	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RY69_RS06450	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RY69_RS06460	SM00841	Elongation factor P, C-terminal
RY69_RS06460	SM01185	RY69_RS06460
RY69_RS06465	SM00382	ATPases associated with a variety of cellular activities
RY69_RS06475	SM00052	Putative diguanylate phosphodiesterase
RY69_RS06475	SM00267	diguanylate cyclase
RY69_RS06535	SM00354	helix_turn _helix lactose operon repressor
RY69_RS06565	SM00382	ATPases associated with a variety of cellular activities
RY69_RS06590	SM00829	Enoylreductase
RY69_RS06595	SM00422	helix_turn_helix, mercury resistance
RY69_RS06635	SM00838	Elongation factor G C-terminus
RY69_RS06635	SM00889	Elongation factor G, domain IV
RY69_RS06685	SM01211	RY69_RS06685
RY69_RS06755	SM01209	RY69_RS06755
RY69_RS06755	SM01210	RY69_RS06755
RY69_RS06830	SM01001	AIR carboxylase
RY69_RS06835	SM00829	Enoylreductase
RY69_RS06840	SM00861	Transketolase, pyrimidine binding domain
RY69_RS06855	SM00382	ATPases associated with a variety of cellular activities
RY69_RS06875	SM00642	Alpha-amylase domain
RY69_RS06880	SM00354	helix_turn _helix lactose operon repressor
RY69_RS06920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RY69_RS06945	SM00400	zinc finger
RY69_RS06945	SM00493	RY69_RS06945
RY69_RS06950	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RY69_RS06955	SM01005	Alanine racemase, C-terminal domain
RY69_RS06975	SM00341	Helicase and RNase D C-terminal
RY69_RS06975	SM00487	DEAD-like helicases superfamily
RY69_RS06975	SM00490	helicase superfamily c-terminal domain
RY69_RS06975	SM00956	RY69_RS06975
RY69_RS06990	SM00382	ATPases associated with a variety of cellular activities
RY69_RS06995	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07045	SM00354	helix_turn _helix lactose operon repressor
RY69_RS07060	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07070	SM00062	Bacterial periplasmic substrate-binding proteins
RY69_RS07075	SM00062	Bacterial periplasmic substrate-binding proteins
RY69_RS07095	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07100	SM00937	RY69_RS07100
RY69_RS07125	SM00849	Metallo-beta-lactamase superfamily
RY69_RS07130	SM01130	RY69_RS07130
RY69_RS07155	SM00220	Serine/Threonine protein kinases, catalytic domain
RY69_RS07160	SM00060	Fibronectin type 3 domain
RY69_RS07170	SM00460	Transglutaminase/protease-like homologues
RY69_RS07175	SM00663	RNA polymerase I subunit A N-terminus
RY69_RS07190	SM00478	endonuclease III
RY69_RS07190	SM00525	RY69_RS07190
RY69_RS07225	SM00420	helix_turn_helix, Deoxyribose operon repressor
RY69_RS07225	SM01134	RY69_RS07225
RY69_RS07245	SM00100	Cyclic nucleotide-monophosphate binding domain
RY69_RS07245	SM00419	helix_turn_helix, cAMP Regulatory protein
RY69_RS07255	SM01329	RY69_RS07255
RY69_RS07295	SM01208	RY69_RS07295
RY69_RS07440	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07450	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07505	SM00226	Low molecular weight phosphatase family
RY69_RS07545	SM00354	helix_turn _helix lactose operon repressor
RY69_RS07575	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07595	SM00354	helix_turn _helix lactose operon repressor
RY69_RS07620	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07665	SM00422	helix_turn_helix, mercury resistance
RY69_RS07700	SM00358	Double-stranded RNA binding motif
RY69_RS07700	SM00535	Ribonuclease III family
RY69_RS07725	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07735	SM00840	RY69_RS07735
RY69_RS07745	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07745	SM00962	SRP54-type protein, GTPase domain
RY69_RS07745	SM00963	SRP54-type protein, helical bundle domain
RY69_RS07810	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07815	SM00316	Ribosomal protein S1-like RNA-binding domain
RY69_RS07815	SM00322	K homology RNA-binding domain
RY69_RS07820	SM01387	RY69_RS07820
RY69_RS07920	SM00354	helix_turn _helix lactose operon repressor
RY69_RS07955	SM00382	ATPases associated with a variety of cellular activities
RY69_RS07985	SM00563	Phosphate acyltransferases
RY69_RS08000	SM01118	RY69_RS08000
RY69_RS08035	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08100	SM00257	Lysin motif
RY69_RS08100	SM00641	Glycosyl hydrolases family 25
RY69_RS08100	SM01095	Cpl-7 lysozyme C-terminal domain
RY69_RS08320	SM00244	prohibitin homologues
RY69_RS08335	SM00530	Helix-turn-helix XRE-family like proteins 
RY69_RS08340	SM00530	Helix-turn-helix XRE-family like proteins 
RY69_RS08350	SM00642	Alpha-amylase domain
RY69_RS08370	SM00862	Transcriptional regulatory protein, C terminal
RY69_RS08375	SM00478	endonuclease III
RY69_RS08375	SM00525	RY69_RS08375
RY69_RS08395	SM00830	Chorismate mutase type II
RY69_RS08405	SM00357	Cold shock protein domain
RY69_RS08405	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08405	SM00959	Rho termination factor, N-terminal domain
RY69_RS08425	SM00845	GatB domain
RY69_RS08450	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08475	SM00746	metallochaperone-like domain
RY69_RS08510	SM01400	RY69_RS08510
RY69_RS08565	SM00938	Nitrogen regulatory protein P-II
RY69_RS08575	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08575	SM00962	SRP54-type protein, GTPase domain
RY69_RS08575	SM00963	SRP54-type protein, helical bundle domain
RY69_RS08620	SM01350	RY69_RS08620
RY69_RS08645	SM00900	RY69_RS08645
RY69_RS08650	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08720	SM00855	Phosphoglycerate mutase family
RY69_RS08770	SM00354	helix_turn _helix lactose operon repressor
RY69_RS08775	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08785	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RY69_RS08785	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RY69_RS08785	SM00493	RY69_RS08785
RY69_RS08790	SM00014	Acid phosphatase homologues
RY69_RS08805	SM00917	LeuA allosteric (dimerisation) domain
RY69_RS08815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RY69_RS08815	SM00895	RY69_RS08815
RY69_RS08840	SM01130	RY69_RS08840
RY69_RS08845	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08850	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08890	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RY69_RS08920	SM00493	RY69_RS08920
RY69_RS08925	SM00382	ATPases associated with a variety of cellular activities
RY69_RS08935	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RY69_RS09000	SM00422	helix_turn_helix, mercury resistance
RY69_RS09005	SM00271	DnaJ molecular chaperone homology domain
RY69_RS09025	SM00857	Resolvase, N terminal domain
RY69_RS09030	SM00354	helix_turn _helix lactose operon repressor
RY69_RS09045	SM00642	Alpha-amylase domain
RY69_RS09065	SM00642	Alpha-amylase domain
RY69_RS09090	SM00354	helix_turn _helix lactose operon repressor
RY69_RS09095	SM00642	Alpha-amylase domain
RY69_RS09125	SM00354	helix_turn _helix lactose operon repressor
RY69_RS09135	SM00642	Alpha-amylase domain
RY69_RS09140	SM00354	helix_turn _helix lactose operon repressor
RY69_RS09160	SM00788	Adenylosuccinate synthetase
RY69_RS09195	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RY69_RS09225	SM00487	DEAD-like helicases superfamily
RY69_RS09225	SM00490	helicase superfamily c-terminal domain
RY69_RS09285	SM00240	Forkhead associated domain
RY69_RS09290	SM00240	Forkhead associated domain
RY69_RS09295	SM00331	Sigma factor PP2C-like phosphatases
RY69_RS09295	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RY69_RS09310	SM00220	Serine/Threonine protein kinases, catalytic domain
RY69_RS09315	SM00220	Serine/Threonine protein kinases, catalytic domain
RY69_RS09315	SM00740	RY69_RS09315
RY69_RS09370	SM00421	helix_turn_helix, Lux Regulon
RY69_RS09370	SM00448	cheY-homologous receiver domain
RY69_RS09420	SM00052	Putative diguanylate phosphodiesterase
RY69_RS09420	SM00267	diguanylate cyclase
RY69_RS09475	SM00947	Carbonic anhydrase
RY69_RS09485	SM00116	Domain in cystathionine beta-synthase and other proteins.
RY69_RS09485	SM01091	Transporter associated domain
RY69_RS09500	SM00354	helix_turn _helix lactose operon repressor
RY69_RS09545	SM00354	helix_turn _helix lactose operon repressor
RY69_RS09560	SM00640	Glycosyl hydrolases family 32
RY69_RS09565	SM00354	helix_turn _helix lactose operon repressor
RY69_RS09620	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
RY69_RS09630	SM01038	Beta galactosidase small chain
RY69_RS09640	SM00354	helix_turn _helix lactose operon repressor
RY69_RS09650	SM00434	DNA Topoisomerase IV
RY69_RS09655	SM00387	Histidine kinase-like ATPases
RY69_RS09655	SM00433	TopoisomeraseII
RY69_RS09670	SM00480	DNA polymerase III beta subunit
RY69_RS09675	SM00382	ATPases associated with a variety of cellular activities
RY69_RS09675	SM00760	Bacterial dnaA protein helix-turn-helix domain
RY69_RS09695	SM00393	Putative single-stranded nucleic acids-binding domain
RY69_RS09710	SM00470	ParB-like nuclease domain
RY69_RS09735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RY69_RS09750	SM00650	Ribosomal RNA adenine dimethylases
RY69_RS09755	SM01208	RY69_RS09755
RY69_RS09770	SM00220	Serine/Threonine protein kinases, catalytic domain
RY69_RS09820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RY69_RS09820	SM00866	RY69_RS09820
RY69_RS09825	SM00382	ATPases associated with a variety of cellular activities
RY69_RS09845	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RY69_RS09870	SM00831	Cation transporter/ATPase, N-terminus
RY69_RS09935	SM00642	Alpha-amylase domain
RY69_RS10005	SM00855	Phosphoglycerate mutase family
RY69_RS10015	SM00354	helix_turn _helix lactose operon repressor
RY69_RS10040	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10055	SM00347	helix_turn_helix multiple antibiotic resistance protein
RY69_RS10060	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10065	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10120	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10155	SM00354	helix_turn _helix lactose operon repressor
RY69_RS10190	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10195	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RY69_RS10275	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10300	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10395	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10460	SM00382	ATPases associated with a variety of cellular activities
RY69_RS10460	SM01086	C-terminal, D2-small domain, of ClpB protein
RY69_RS10500	SM00855	Phosphoglycerate mutase family
RY69_RS10515	SM00346	helix_turn_helix isocitrate lyase regulation
