locus-tag class description RY69_RS00020 PF00398 Ribosomal RNA adenine dimethylase RY69_RS00030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RY69_RS00030 PF07992 Pyridine nucleotide-disulphide oxidoreductase RY69_RS00035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RY69_RS00045 PF17932 Tetracyclin repressor-like, C-terminal domain RY69_RS00045 PF00440 Bacterial regulatory proteins, tetR family RY69_RS00050 PF03485 Arginyl tRNA synthetase N terminal domain RY69_RS00050 PF00750 tRNA synthetases class I (R) RY69_RS00050 PF05746 DALR anticodon binding domain RY69_RS00055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RY69_RS00055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RY69_RS00060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RY69_RS00060 PF00367 phosphotransferase system, EIIB RY69_RS00060 PF02378 Phosphotransferase system, EIIC RY69_RS00065 PF00367 phosphotransferase system, EIIB RY69_RS00065 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RY69_RS00065 PF02378 Phosphotransferase system, EIIC RY69_RS00070 PF01842 ACT domain RY69_RS00070 PF03447 Homoserine dehydrogenase, NAD binding domain RY69_RS00070 PF00742 Homoserine dehydrogenase RY69_RS00075 PF00288 GHMP kinases N terminal domain RY69_RS00075 PF08544 GHMP kinases C terminal RY69_RS00080 PF02545 Maf-like protein RY69_RS00080 PF00293 NUDIX domain RY69_RS00095 PF00005 ABC transporter RY69_RS00105 PF00356 Bacterial regulatory proteins, lacI family RY69_RS00110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RY69_RS00110 PF13378 Enolase C-terminal domain-like RY69_RS00120 PF07690 Major Facilitator Superfamily RY69_RS00130 PF00701 Dihydrodipicolinate synthetase family RY69_RS00140 PF01546 Peptidase family M20/M25/M40 RY69_RS00140 PF07687 Peptidase dimerisation domain RY69_RS00145 PF10150 Ribonuclease E/G family RY69_RS00150 PF00829 Ribosomal prokaryotic L21 protein RY69_RS00155 PF01016 Ribosomal L27 protein RY69_RS00160 PF01018 GTP1/OBG RY69_RS00160 PF09269 Domain of unknown function (DUF1967) RY69_RS00160 PF01926 50S ribosome-binding GTPase RY69_RS00165 PF00696 Amino acid kinase family RY69_RS00165 PF01472 PUA domain RY69_RS00170 PF01522 Polysaccharide deacetylase RY69_RS00175 PF00155 Aminotransferase class I and II RY69_RS00185 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RY69_RS00190 PF02357 Transcription termination factor nusG RY69_RS00200 PF00298 Ribosomal protein L11, RNA binding domain RY69_RS00200 PF03946 Ribosomal protein L11, N-terminal domain RY69_RS00205 PF00687 Ribosomal protein L1p/L10e family RY69_RS00210 PF13556 PucR C-terminal helix-turn-helix domain RY69_RS00210 PF17853 GGDEF-like domain RY69_RS00225 PF02632 BioY family RY69_RS00230 PF02785 Biotin carboxylase C-terminal domain RY69_RS00230 PF00364 Biotin-requiring enzyme RY69_RS00230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RY69_RS00230 PF00289 Biotin carboxylase, N-terminal domain RY69_RS00235 PF01039 Carboxyl transferase domain RY69_RS00310 PF11700 Vacuole effluxer Atg22 like RY69_RS00315 PF00294 pfkB family carbohydrate kinase RY69_RS00315 PF01467 Cytidylyltransferase-like RY69_RS00320 PF00830 Ribosomal L28 family RY69_RS00325 PF00270 DEAD/DEAH box helicase RY69_RS00325 PF17191 RecG wedge domain RY69_RS00325 PF00271 Helicase conserved C-terminal domain RY69_RS00335 PF01746 tRNA (Guanine-1)-methyltransferase RY69_RS00340 PF16325 Peptidase family U32 C-terminal domain RY69_RS00340 PF01136 Peptidase family U32 RY69_RS00345 PF02578 Multi-copper polyphenol oxidoreductase laccase RY69_RS00350 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RY69_RS00355 PF01470 Pyroglutamyl peptidase RY69_RS00365 PF03051 Peptidase C1-like family RY69_RS00370 PF00793 DAHP synthetase I family RY69_RS00375 PF00793 DAHP synthetase I family RY69_RS00380 PF01048 Phosphorylase superfamily RY69_RS00390 PF00512 His Kinase A (phospho-acceptor) domain RY69_RS00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS00395 PF00072 Response regulator receiver domain RY69_RS00395 PF00486 Transcriptional regulatory protein, C terminal RY69_RS00400 PF12849 PBP superfamily domain RY69_RS00405 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS00410 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS00415 PF00005 ABC transporter RY69_RS00420 PF00860 Permease family RY69_RS00430 PF00466 Ribosomal protein L10 RY69_RS00435 PF16320 Ribosomal protein L7/L12 dimerisation domain RY69_RS00435 PF00542 Ribosomal protein L7/L12 C-terminal domain RY69_RS00475 PF00166 Chaperonin 10 Kd subunit RY69_RS00495 PF00471 Ribosomal protein L33 RY69_RS00500 PF01565 FAD binding domain RY69_RS00500 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RY69_RS00505 PF13520 Amino acid permease RY69_RS00510 PF00037 4Fe-4S binding domain RY69_RS00515 PF00155 Aminotransferase class I and II RY69_RS00520 PF00817 impB/mucB/samB family RY69_RS00520 PF11799 impB/mucB/samB family C-terminal domain RY69_RS00535 PF00356 Bacterial regulatory proteins, lacI family RY69_RS00540 PF01547 Bacterial extracellular solute-binding protein RY69_RS00545 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS00550 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS00555 PF00232 Glycosyl hydrolase family 1 RY69_RS00565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RY69_RS00565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RY69_RS00565 PF01842 ACT domain RY69_RS00570 PF01205 Uncharacterized protein family UPF0029 RY69_RS00570 PF09186 Domain of unknown function (DUF1949) RY69_RS00580 PF02446 4-alpha-glucanotransferase RY69_RS00585 PF00572 Ribosomal protein L13 RY69_RS00590 PF00380 Ribosomal protein S9/S16 RY69_RS00595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RY69_RS00595 PF00128 Alpha amylase, catalytic domain RY69_RS00600 PF08240 Alcohol dehydrogenase GroES-like domain RY69_RS00600 PF00107 Zinc-binding dehydrogenase RY69_RS00605 PF07690 Major Facilitator Superfamily RY69_RS00620 PF07690 Major Facilitator Superfamily RY69_RS00625 PF00107 Zinc-binding dehydrogenase RY69_RS00625 PF08240 Alcohol dehydrogenase GroES-like domain RY69_RS00635 PF00465 Iron-containing alcohol dehydrogenase RY69_RS00635 PF00171 Aldehyde dehydrogenase family RY69_RS00645 PF03306 Alpha-acetolactate decarboxylase RY69_RS00650 PF00338 Ribosomal protein S10p/S20e RY69_RS00655 PF00297 Ribosomal protein L3 RY69_RS00660 PF00573 Ribosomal protein L4/L1 family RY69_RS00665 PF00276 Ribosomal protein L23 RY69_RS00670 PF00181 Ribosomal Proteins L2, RNA binding domain RY69_RS00670 PF03947 Ribosomal Proteins L2, C-terminal domain RY69_RS00675 PF00203 Ribosomal protein S19 RY69_RS00680 PF00237 Ribosomal protein L22p/L17e RY69_RS00685 PF00189 Ribosomal protein S3, C-terminal domain RY69_RS00685 PF07650 KH domain RY69_RS00690 PF00252 Ribosomal protein L16p/L10e RY69_RS00695 PF00831 Ribosomal L29 protein RY69_RS00700 PF00366 Ribosomal protein S17 RY69_RS00705 PF00238 Ribosomal protein L14p/L23e RY69_RS00710 PF00467 KOW motif RY69_RS00710 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RY69_RS00715 PF00673 ribosomal L5P family C-terminus RY69_RS00715 PF00281 Ribosomal protein L5 RY69_RS00720 PF00253 Ribosomal protein S14p/S29e RY69_RS00725 PF00410 Ribosomal protein S8 RY69_RS00730 PF00347 Ribosomal protein L6 RY69_RS00735 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RY69_RS00740 PF03719 Ribosomal protein S5, C-terminal domain RY69_RS00740 PF00333 Ribosomal protein S5, N-terminal domain RY69_RS00745 PF00327 Ribosomal protein L30p/L7e RY69_RS00750 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RY69_RS00755 PF00344 SecY translocase RY69_RS00765 PF01176 Translation initiation factor 1A / IF-1 RY69_RS00770 PF00444 Ribosomal protein L36 RY69_RS00775 PF00416 Ribosomal protein S13/S18 RY69_RS00780 PF00411 Ribosomal protein S11 RY69_RS00785 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RY69_RS00785 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RY69_RS00785 PF01000 RNA polymerase Rpb3/RpoA insert domain RY69_RS00790 PF01196 Ribosomal protein L17 RY69_RS00795 PF01416 tRNA pseudouridine synthase RY69_RS00800 PF14403 Circularly permuted ATP-grasp type 2 RY69_RS00815 PF00356 Bacterial regulatory proteins, lacI family RY69_RS00825 PF13184 NusA-like KH domain RY69_RS00825 PF08529 NusA N-terminal domain RY69_RS00830 PF00009 Elongation factor Tu GTP binding domain RY69_RS00830 PF04760 Translation initiation factor IF-2, N-terminal region RY69_RS00830 PF11987 Translation-initiation factor 2 RY69_RS00835 PF02033 Ribosome-binding factor A RY69_RS00840 PF09142 tRNA Pseudouridine synthase II, C terminal RY69_RS00840 PF01509 TruB family pseudouridylate synthase (N terminal domain) RY69_RS00840 PF16198 tRNA pseudouridylate synthase B C-terminal domain RY69_RS00845 PF06574 FAD synthetase RY69_RS00845 PF01687 Riboflavin kinase RY69_RS00850 PF18073 Rubredoxin metal binding domain RY69_RS00860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RY69_RS00865 PF00075 RNase H RY69_RS00870 PF07992 Pyridine nucleotide-disulphide oxidoreductase RY69_RS00870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RY69_RS00885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RY69_RS00885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RY69_RS00885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RY69_RS00885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RY69_RS00890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RY69_RS00890 PF02378 Phosphotransferase system, EIIC RY69_RS00890 PF00367 phosphotransferase system, EIIB RY69_RS00900 PF02142 MGS-like domain RY69_RS00900 PF00781 Diacylglycerol kinase catalytic domain RY69_RS00905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RY69_RS00905 PF02403 Seryl-tRNA synthetase N-terminal domain RY69_RS00920 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS00925 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS00930 PF17385 Lacto-N-biose phosphorylase central domain RY69_RS00930 PF17386 Lacto-N-biose phosphorylase C-terminal domain RY69_RS00930 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain RY69_RS00935 PF01636 Phosphotransferase enzyme family RY69_RS00940 PF16363 GDP-mannose 4,6 dehydratase RY69_RS00945 PF00196 Bacterial regulatory proteins, luxR family RY69_RS00945 PF00072 Response regulator receiver domain RY69_RS00980 PF07690 Major Facilitator Superfamily RY69_RS00990 PF00152 tRNA synthetases class II (D, K and N) RY69_RS00990 PF01336 OB-fold nucleic acid binding domain RY69_RS00995 PF01040 UbiA prenyltransferase family RY69_RS01000 PF00300 Histidine phosphatase superfamily (branch 1) RY69_RS01005 PF01895 PhoU domain RY69_RS01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS01010 PF00512 His Kinase A (phospho-acceptor) domain RY69_RS01020 PF00266 Aminotransferase class-V RY69_RS01025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RY69_RS01025 PF05257 CHAP domain RY69_RS01035 PF01476 LysM domain RY69_RS01035 PF00877 NlpC/P60 family RY69_RS01035 PF08239 Bacterial SH3 domain RY69_RS01040 PF00582 Universal stress protein family RY69_RS01045 PF02566 OsmC-like protein RY69_RS01050 PF00303 Thymidylate synthase RY69_RS01055 PF00186 Dihydrofolate reductase RY69_RS01060 PF01451 Low molecular weight phosphotyrosine protein phosphatase RY69_RS01070 PF00005 ABC transporter RY69_RS01080 PF02687 FtsX-like permease family RY69_RS01080 PF12704 MacB-like periplasmic core domain RY69_RS01085 PF13276 HTH-like domain RY69_RS01085 PF01527 Transposase RY69_RS01085 PF00665 Integrase core domain RY69_RS01085 PF13333 Integrase core domain RY69_RS01095 PF00480 ROK family RY69_RS01100 PF01547 Bacterial extracellular solute-binding protein RY69_RS01110 PF00356 Bacterial regulatory proteins, lacI family RY69_RS01115 PF02837 Glycosyl hydrolases family 2, sugar binding domain RY69_RS01115 PF00703 Glycosyl hydrolases family 2 RY69_RS01115 PF16353 Domain of unknown function(DUF4981) RY69_RS01115 PF02929 Beta galactosidase small chain RY69_RS01115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RY69_RS01120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RY69_RS01135 PF00665 Integrase core domain RY69_RS01135 PF13276 HTH-like domain RY69_RS01140 PF01527 Transposase RY69_RS01160 PF05257 CHAP domain RY69_RS01160 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RY69_RS01210 PF12848 ABC transporter RY69_RS01210 PF00005 ABC transporter RY69_RS01220 PF13614 AAA domain RY69_RS01230 PF01695 IstB-like ATP binding protein RY69_RS01275 PF00512 His Kinase A (phospho-acceptor) domain RY69_RS01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS01275 PF00672 HAMP domain RY69_RS01280 PF00072 Response regulator receiver domain RY69_RS01280 PF00486 Transcriptional regulatory protein, C terminal RY69_RS01300 PF00005 ABC transporter RY69_RS01310 PF00356 Bacterial regulatory proteins, lacI family RY69_RS01315 PF00005 ABC transporter RY69_RS01345 PF00005 ABC transporter RY69_RS01360 PF13476 AAA domain RY69_RS01385 PF13614 AAA domain RY69_RS01415 PF02390 Putative methyltransferase RY69_RS01435 PF00465 Iron-containing alcohol dehydrogenase RY69_RS01440 PF00535 Glycosyl transferase family 2 RY69_RS01455 PF00005 ABC transporter RY69_RS01455 PF13732 Domain of unknown function (DUF4162) RY69_RS01470 PF09179 TilS substrate binding domain RY69_RS01470 PF01171 PP-loop family RY69_RS01475 PF00156 Phosphoribosyl transferase domain RY69_RS01480 PF00004 ATPase family associated with various cellular activities (AAA) RY69_RS01480 PF17862 AAA+ lid domain RY69_RS01480 PF01434 Peptidase family M41 RY69_RS01485 PF01227 GTP cyclohydrolase I RY69_RS01490 PF00809 Pterin binding enzyme RY69_RS01495 PF02152 Dihydroneopterin aldolase RY69_RS01510 PF00005 ABC transporter RY69_RS01510 PF12848 ABC transporter RY69_RS01515 PF07690 Major Facilitator Superfamily RY69_RS01530 PF00480 ROK family RY69_RS01545 PF00248 Aldo/keto reductase family RY69_RS01550 PF01327 Polypeptide deformylase RY69_RS01560 PF07690 Major Facilitator Superfamily RY69_RS01570 PF01197 Ribosomal protein L31 RY69_RS01575 PF00472 RF-1 domain RY69_RS01575 PF03462 PCRF domain RY69_RS01580 PF17827 PrmC N-terminal domain RY69_RS01585 PF13458 Periplasmic binding protein RY69_RS01590 PF02653 Branched-chain amino acid transport system / permease component RY69_RS01595 PF11862 Domain of unknown function (DUF3382) RY69_RS01595 PF02653 Branched-chain amino acid transport system / permease component RY69_RS01600 PF12399 Branched-chain amino acid ATP-binding cassette transporter RY69_RS01600 PF00005 ABC transporter RY69_RS01605 PF00005 ABC transporter RY69_RS01610 PF01300 Telomere recombination RY69_RS01615 PF00953 Glycosyl transferase family 4 RY69_RS01620 PF00478 IMP dehydrogenase / GMP reductase domain RY69_RS01620 PF00571 CBS domain RY69_RS01625 PF00271 Helicase conserved C-terminal domain RY69_RS01625 PF00176 SNF2 family N-terminal domain RY69_RS01640 PF00239 Resolvase, N terminal domain RY69_RS01640 PF02796 Helix-turn-helix domain of resolvase RY69_RS01655 PF00356 Bacterial regulatory proteins, lacI family RY69_RS01660 PF00929 Exonuclease RY69_RS01665 PF05970 PIF1-like helicase RY69_RS01665 PF14493 Helix-turn-helix domain RY69_RS01675 PF03129 Anticodon binding domain RY69_RS01675 PF04073 Aminoacyl-tRNA editing domain RY69_RS01675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RY69_RS01685 PF05649 Peptidase family M13 RY69_RS01685 PF01431 Peptidase family M13 RY69_RS01695 PF00557 Metallopeptidase family M24 RY69_RS01700 PF00285 Citrate synthase, C-terminal domain RY69_RS01705 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle RY69_RS01705 PF14602 Hexapeptide repeat of succinyl-transferase RY69_RS01710 PF04434 SWIM zinc finger RY69_RS01710 PF00176 SNF2 family N-terminal domain RY69_RS01710 PF00271 Helicase conserved C-terminal domain RY69_RS01720 PF03852 DNA mismatch endonuclease Vsr RY69_RS01725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RY69_RS01725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RY69_RS01730 PF00155 Aminotransferase class I and II RY69_RS01735 PF02541 Ppx/GppA phosphatase family RY69_RS01755 PF01741 Large-conductance mechanosensitive channel, MscL RY69_RS01760 PF00501 AMP-binding enzyme RY69_RS01765 PF02525 Flavodoxin-like fold RY69_RS01770 PF02609 Exonuclease VII small subunit RY69_RS01775 PF02601 Exonuclease VII, large subunit RY69_RS01775 PF13742 OB-fold nucleic acid binding domain RY69_RS01780 PF13597 Anaerobic ribonucleoside-triphosphate reductase RY69_RS01780 PF03477 ATP cone domain RY69_RS01800 PF00440 Bacterial regulatory proteins, tetR family RY69_RS01805 PF14310 Fibronectin type III-like domain RY69_RS01805 PF00933 Glycosyl hydrolase family 3 N terminal domain RY69_RS01805 PF01915 Glycosyl hydrolase family 3 C-terminal domain RY69_RS01840 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RY69_RS01840 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RY69_RS01855 PF00933 Glycosyl hydrolase family 3 N terminal domain RY69_RS01855 PF01915 Glycosyl hydrolase family 3 C-terminal domain RY69_RS01855 PF14310 Fibronectin type III-like domain RY69_RS01860 PF01047 MarR family RY69_RS01865 PF00005 ABC transporter RY69_RS01865 PF00664 ABC transporter transmembrane region RY69_RS01870 PF00005 ABC transporter RY69_RS01870 PF00664 ABC transporter transmembrane region RY69_RS01875 PF00356 Bacterial regulatory proteins, lacI family RY69_RS01880 PF01156 Inosine-uridine preferring nucleoside hydrolase RY69_RS01890 PF00294 pfkB family carbohydrate kinase RY69_RS01895 PF00133 tRNA synthetases class I (I, L, M and V) RY69_RS01895 PF08264 Anticodon-binding domain of tRNA RY69_RS01910 PF02661 Fic/DOC family RY69_RS01910 PF13784 Fic/DOC family N-terminal RY69_RS01915 PF02773 S-adenosylmethionine synthetase, C-terminal domain RY69_RS01915 PF02772 S-adenosylmethionine synthetase, central domain RY69_RS01915 PF00438 S-adenosylmethionine synthetase, N-terminal domain RY69_RS01920 PF01192 RNA polymerase Rpb6 RY69_RS01925 PF00920 Dehydratase family RY69_RS01930 PF00551 Formyl transferase RY69_RS01930 PF02911 Formyl transferase, C-terminal domain RY69_RS01940 PF17764 3′ DNA-binding domain (3′BD) RY69_RS01950 PF09335 SNARE associated Golgi protein RY69_RS01955 PF00004 ATPase family associated with various cellular activities (AAA) RY69_RS01955 PF17758 Proteasomal ATPase OB N-terminal domain RY69_RS01955 PF16450 Proteasomal ATPase OB C-terminal domain RY69_RS01960 PF13419 Haloacid dehalogenase-like hydrolase RY69_RS01975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RY69_RS01975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RY69_RS01975 PF02378 Phosphotransferase system, EIIC RY69_RS01980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RY69_RS01985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RY69_RS01985 PF02378 Phosphotransferase system, EIIC RY69_RS01990 PF00834 Ribulose-phosphate 3 epimerase family RY69_RS01995 PF03136 Pup-ligase protein RY69_RS02000 PF00459 Inositol monophosphatase family RY69_RS02010 PF03136 Pup-ligase protein RY69_RS02015 PF00216 Bacterial DNA-binding protein RY69_RS02025 PF00206 Lyase RY69_RS02025 PF08328 Adenylosuccinate lyase C-terminal RY69_RS02070 PF17863 AAA lid domain RY69_RS02070 PF07726 ATPase family associated with various cellular activities (AAA) RY69_RS02075 PF03167 Uracil DNA glycosylase superfamily RY69_RS02085 PF00313 'Cold-shock' DNA-binding domain RY69_RS02090 PF00118 TCP-1/cpn60 chaperonin family RY69_RS02105 PF00072 Response regulator receiver domain RY69_RS02105 PF00486 Transcriptional regulatory protein, C terminal RY69_RS02110 PF00512 His Kinase A (phospho-acceptor) domain RY69_RS02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS02110 PF00672 HAMP domain RY69_RS02115 PF00313 'Cold-shock' DNA-binding domain RY69_RS02125 PF00582 Universal stress protein family RY69_RS02130 PF00004 ATPase family associated with various cellular activities (AAA) RY69_RS02130 PF07724 AAA domain (Cdc48 subfamily) RY69_RS02130 PF17871 AAA lid domain RY69_RS02130 PF02861 Clp amino terminal domain, pathogenicity island component RY69_RS02130 PF10431 C-terminal, D2-small domain, of ClpB protein RY69_RS02140 PF00083 Sugar (and other) transporter RY69_RS02155 PF03993 Domain of Unknown Function (DUF349) RY69_RS02160 PF13393 Histidyl-tRNA synthetase RY69_RS02160 PF03129 Anticodon binding domain RY69_RS02165 PF00152 tRNA synthetases class II (D, K and N) RY69_RS02165 PF01336 OB-fold nucleic acid binding domain RY69_RS02165 PF02938 GAD domain RY69_RS02175 PF00005 ABC transporter RY69_RS02180 PF00497 Bacterial extracellular solute-binding proteins, family 3 RY69_RS02185 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS02190 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS02200 PF01810 LysE type translocator RY69_RS02205 PF00392 Bacterial regulatory proteins, gntR family RY69_RS02205 PF00155 Aminotransferase class I and II RY69_RS02210 PF03976 Polyphosphate kinase 2 (PPK2) RY69_RS02215 PF00270 DEAD/DEAH box helicase RY69_RS02215 PF08148 DSHCT (NUC185) domain RY69_RS02215 PF00271 Helicase conserved C-terminal domain RY69_RS02220 PF00004 ATPase family associated with various cellular activities (AAA) RY69_RS02220 PF16193 AAA C-terminal domain RY69_RS02220 PF12002 MgsA AAA+ ATPase C terminal RY69_RS02230 PF07690 Major Facilitator Superfamily RY69_RS02235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RY69_RS02255 PF00005 ABC transporter RY69_RS02255 PF02361 Cobalt transport protein RY69_RS02275 PF00480 ROK family RY69_RS02280 PF00251 Glycosyl hydrolases family 32 N-terminal domain RY69_RS02280 PF08244 Glycosyl hydrolases family 32 C terminal RY69_RS02285 PF01306 LacY proton/sugar symporter RY69_RS02290 PF00356 Bacterial regulatory proteins, lacI family RY69_RS02290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RY69_RS02305 PF00072 Response regulator receiver domain RY69_RS02305 PF00196 Bacterial regulatory proteins, luxR family RY69_RS02315 PF07690 Major Facilitator Superfamily RY69_RS02320 PF01910 Thiamine-binding protein RY69_RS02325 PF02581 Thiamine monophosphate synthase RY69_RS02325 PF08543 Phosphomethylpyrimidine kinase RY69_RS02330 PF00004 ATPase family associated with various cellular activities (AAA) RY69_RS02330 PF17862 AAA+ lid domain RY69_RS02330 PF01434 Peptidase family M41 RY69_RS02335 PF01964 Radical SAM ThiC family RY69_RS02335 PF02581 Thiamine monophosphate synthase RY69_RS02335 PF13667 ThiC-associated domain RY69_RS02340 PF02110 Hydroxyethylthiazole kinase family RY69_RS02345 PF03129 Anticodon binding domain RY69_RS02345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RY69_RS02350 PF01207 Dihydrouridine synthase (Dus) RY69_RS02355 PF00091 Tubulin/FtsZ family, GTPase domain RY69_RS02355 PF12327 FtsZ family, C-terminal domain RY69_RS02360 PF04472 Cell division protein SepF RY69_RS02375 PF01252 Signal peptidase (SPase) II RY69_RS02380 PF00849 RNA pseudouridylate synthase RY69_RS02390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RY69_RS02390 PF02811 PHP domain RY69_RS02390 PF14579 Helix-hairpin-helix motif RY69_RS02390 PF07733 Bacterial DNA polymerase III alpha NTPase domain RY69_RS02395 PF13811 Domain of unknown function (DUF4186) RY69_RS02400 PF00248 Aldo/keto reductase family RY69_RS02405 PF06100 MCRA family RY69_RS02425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RY69_RS02425 PF13378 Enolase C-terminal domain-like RY69_RS02440 PF00701 Dihydrodipicolinate synthetase family RY69_RS02445 PF05025 RbsD / FucU transport protein family RY69_RS02460 PF00248 Aldo/keto reductase family RY69_RS02465 PF00708 Acylphosphatase RY69_RS02470 PF00815 Histidinol dehydrogenase RY69_RS02475 PF00155 Aminotransferase class I and II RY69_RS02480 PF00475 Imidazoleglycerol-phosphate dehydratase RY69_RS02490 PF00117 Glutamine amidotransferase class-I RY69_RS02495 PF00977 Histidine biosynthesis protein RY69_RS02505 PF03951 Glutamine synthetase, beta-Grasp domain RY69_RS02505 PF00120 Glutamine synthetase, catalytic domain RY69_RS02510 PF07690 Major Facilitator Superfamily RY69_RS02515 PF04408 Helicase associated domain (HA2) RY69_RS02515 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RY69_RS02515 PF11898 Domain of unknown function (DUF3418) RY69_RS02515 PF00270 DEAD/DEAH box helicase RY69_RS02515 PF00271 Helicase conserved C-terminal domain RY69_RS02520 PF08468 Methyltransferase small domain N-terminal RY69_RS02520 PF05175 Methyltransferase small domain RY69_RS02525 PF01926 50S ribosome-binding GTPase RY69_RS02525 PF16360 GTP-binding GTPase Middle Region RY69_RS02525 PF13167 GTP-binding GTPase N-terminal RY69_RS02530 PF00056 lactate/malate dehydrogenase, NAD binding domain RY69_RS02530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RY69_RS02535 PF01545 Cation efflux family RY69_RS02540 PF00717 Peptidase S24-like RY69_RS02540 PF01726 LexA DNA binding domain RY69_RS02550 PF03477 ATP cone domain RY69_RS02555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RY69_RS02555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RY69_RS02565 PF02381 MraZ protein, putative antitoxin-like RY69_RS02570 PF01795 MraW methylase family RY69_RS02580 PF00905 Penicillin binding protein transpeptidase domain RY69_RS02580 PF03717 Penicillin-binding Protein dimerisation domain RY69_RS02590 PF01225 Mur ligase family, catalytic domain RY69_RS02590 PF08245 Mur ligase middle domain RY69_RS02590 PF02875 Mur ligase family, glutamate ligase domain RY69_RS02595 PF00953 Glycosyl transferase family 4 RY69_RS02600 PF08245 Mur ligase middle domain RY69_RS02605 PF01098 Cell cycle protein RY69_RS02610 PF04101 Glycosyltransferase family 28 C-terminal domain RY69_RS02610 PF03033 Glycosyltransferase family 28 N-terminal domain RY69_RS02615 PF08245 Mur ligase middle domain RY69_RS02615 PF01225 Mur ligase family, catalytic domain RY69_RS02615 PF02875 Mur ligase family, glutamate ligase domain RY69_RS02635 PF00480 ROK family RY69_RS02640 PF00480 ROK family RY69_RS02645 PF00480 ROK family RY69_RS02650 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RY69_RS02655 PF01979 Amidohydrolase family RY69_RS02660 PF13344 Haloacid dehalogenase-like hydrolase RY69_RS02660 PF00293 NUDIX domain RY69_RS02665 PF05195 Aminopeptidase P, N-terminal domain RY69_RS02665 PF00557 Metallopeptidase family M24 RY69_RS02670 PF02875 Mur ligase family, glutamate ligase domain RY69_RS02670 PF08245 Mur ligase middle domain RY69_RS02675 PF02463 RecF/RecN/SMC N terminal domain RY69_RS02675 PF06470 SMC proteins Flexible Hinge Domain RY69_RS02690 PF02875 Mur ligase family, glutamate ligase domain RY69_RS02690 PF08245 Mur ligase middle domain RY69_RS02695 PF04542 Sigma-70 region 2 RY69_RS02695 PF08281 Sigma-70, region 4 RY69_RS02705 PF01263 Aldose 1-epimerase RY69_RS02710 PF01263 Aldose 1-epimerase RY69_RS02715 PF02401 LytB protein RY69_RS02720 PF04073 Aminoacyl-tRNA editing domain RY69_RS02725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RY69_RS02725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RY69_RS02740 PF00707 Translation initiation factor IF-3, C-terminal domain RY69_RS02740 PF05198 Translation initiation factor IF-3, N-terminal domain RY69_RS02745 PF01632 Ribosomal protein L35 RY69_RS02750 PF00453 Ribosomal protein L20 RY69_RS02755 PF02595 Glycerate kinase family RY69_RS02760 PF02899 Phage integrase, N-terminal SAM-like domain RY69_RS02760 PF00589 Phage integrase family RY69_RS02765 PF13614 AAA domain RY69_RS02770 PF02616 Segregation and condensation protein ScpA RY69_RS02775 PF04079 Segregation and condensation complex subunit ScpB RY69_RS02785 PF02445 Quinolinate synthetase A protein RY69_RS02790 PF00890 FAD binding domain RY69_RS02790 PF02910 Fumarate reductase flavoprotein C-term RY69_RS02795 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RY69_RS02795 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RY69_RS02800 PF00266 Aminotransferase class-V RY69_RS02805 PF07690 Major Facilitator Superfamily RY69_RS02810 PF00009 Elongation factor Tu GTP binding domain RY69_RS02810 PF03144 Elongation factor Tu domain 2 RY69_RS02810 PF14492 Elongation Factor G, domain II RY69_RS02810 PF00679 Elongation factor G C-terminus RY69_RS02820 PF00800 Prephenate dehydratase RY69_RS02820 PF01817 Chorismate mutase type II RY69_RS02820 PF01842 ACT domain RY69_RS02825 PF02153 Prephenate dehydrogenase RY69_RS02835 PF02899 Phage integrase, N-terminal SAM-like domain RY69_RS02835 PF00589 Phage integrase family RY69_RS02840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RY69_RS02845 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS02850 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS02850 PF12911 N-terminal TM domain of oligopeptide transport permease C RY69_RS02855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RY69_RS02855 PF00005 ABC transporter RY69_RS02860 PF03372 Endonuclease/Exonuclease/phosphatase family RY69_RS02875 PF05958 tRNA (Uracil-5-)-methyltransferase RY69_RS02890 PF00330 Aconitase family (aconitate hydratase) RY69_RS02890 PF00694 Aconitase C-terminal domain RY69_RS02905 PF01027 Inhibitor of apoptosis-promoting Bax1 RY69_RS02915 PF04607 Region found in RelA / SpoT proteins RY69_RS02920 PF00919 Uncharacterized protein family UPF0004 RY69_RS02920 PF04055 Radical SAM superfamily RY69_RS02935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RY69_RS02935 PF09397 Ftsk gamma domain RY69_RS02935 PF17854 FtsK alpha domain RY69_RS02935 PF01580 FtsK/SpoIIIE family RY69_RS02940 PF01066 CDP-alcohol phosphatidyltransferase RY69_RS02945 PF02464 Competence-damaged protein RY69_RS02945 PF18146 Damage-inducible protein CinA KH domain RY69_RS02945 PF00994 Probable molybdopterin binding domain RY69_RS02960 PF00154 recA bacterial DNA recombination protein RY69_RS02965 PF02631 RecX family RY69_RS02975 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RY69_RS02975 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RY69_RS02980 PF07517 SecA DEAD-like domain RY69_RS02980 PF07516 SecA Wing and Scaffold domain RY69_RS02980 PF02810 SEC-C motif RY69_RS02980 PF01043 SecA preprotein cross-linking domain RY69_RS02985 PF00591 Glycosyl transferase family, a/b domain RY69_RS02985 PF02885 Glycosyl transferase family, helical bundle domain RY69_RS03000 PF03793 PASTA domain RY69_RS03000 PF00069 Protein kinase domain RY69_RS03005 PF00348 Polyprenyl synthetase RY69_RS03015 PF04539 Sigma-70 region 3 RY69_RS03015 PF04545 Sigma-70, region 4 RY69_RS03015 PF04542 Sigma-70 region 2 RY69_RS03015 PF00140 Sigma-70 factor, region 1.2 RY69_RS03020 PF00986 DNA gyrase B subunit, carboxyl terminus RY69_RS03020 PF00204 DNA gyrase B RY69_RS03020 PF01751 Toprim domain RY69_RS03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS03030 PF00294 pfkB family carbohydrate kinase RY69_RS03035 PF08494 DEAD/H associated RY69_RS03035 PF00270 DEAD/DEAH box helicase RY69_RS03035 PF00271 Helicase conserved C-terminal domain RY69_RS03050 PF00521 DNA gyrase/topoisomerase IV, subunit A RY69_RS03050 PF03989 DNA gyrase C-terminal domain, beta-propeller RY69_RS03070 PF00692 dUTPase RY69_RS03075 PF02824 TGS domain RY69_RS03075 PF04607 Region found in RelA / SpoT proteins RY69_RS03075 PF13291 ACT domain RY69_RS03080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RY69_RS03095 PF13784 Fic/DOC family N-terminal RY69_RS03095 PF02661 Fic/DOC family RY69_RS03110 PF02796 Helix-turn-helix domain of resolvase RY69_RS03110 PF00239 Resolvase, N terminal domain RY69_RS03115 PF00239 Resolvase, N terminal domain RY69_RS03115 PF02796 Helix-turn-helix domain of resolvase RY69_RS03135 PF05105 Bacteriophage holin family RY69_RS03140 PF01527 Transposase RY69_RS03145 PF13276 HTH-like domain RY69_RS03145 PF00665 Integrase core domain RY69_RS03145 PF13333 Integrase core domain RY69_RS03150 PF13276 HTH-like domain RY69_RS03150 PF00665 Integrase core domain RY69_RS03155 PF01527 Transposase RY69_RS03175 PF01527 Transposase RY69_RS03180 PF13333 Integrase core domain RY69_RS03180 PF00665 Integrase core domain RY69_RS03180 PF13276 HTH-like domain RY69_RS03185 PF13333 Integrase core domain RY69_RS03185 PF00665 Integrase core domain RY69_RS03185 PF13276 HTH-like domain RY69_RS03185 PF01527 Transposase RY69_RS03200 PF02661 Fic/DOC family RY69_RS03200 PF17841 BID domain of Bartonella effector protein (Bep) RY69_RS03205 PF00589 Phage integrase family RY69_RS03205 PF02899 Phage integrase, N-terminal SAM-like domain RY69_RS03210 PF01695 IstB-like ATP binding protein RY69_RS03240 PF13784 Fic/DOC family N-terminal RY69_RS03240 PF02661 Fic/DOC family RY69_RS03260 PF01695 IstB-like ATP binding protein RY69_RS03275 PF01547 Bacterial extracellular solute-binding protein RY69_RS03280 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS03285 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS03295 PF00356 Bacterial regulatory proteins, lacI family RY69_RS03335 PF00300 Histidine phosphatase superfamily (branch 1) RY69_RS03340 PF01544 CorA-like Mg2+ transporter protein RY69_RS03345 PF00497 Bacterial extracellular solute-binding proteins, family 3 RY69_RS03350 PF08264 Anticodon-binding domain of tRNA RY69_RS03350 PF09334 tRNA synthetases class I (M) RY69_RS03350 PF13603 Leucyl-tRNA synthetase, Domain 2 RY69_RS03370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RY69_RS03375 PF00814 Glycoprotease family RY69_RS03380 PF00583 Acetyltransferase (GNAT) family RY69_RS03385 PF00814 Glycoprotease family RY69_RS03420 PF02467 Transcription factor WhiB RY69_RS03435 PF13614 AAA domain RY69_RS03560 PF09217 Restriction endonuclease EcoRII, N-terminal RY69_RS03560 PF09019 EcoRII C terminal RY69_RS03570 PF07804 HipA-like C-terminal domain RY69_RS03585 PF01751 Toprim domain RY69_RS03585 PF01131 DNA topoisomerase RY69_RS03605 PF05257 CHAP domain RY69_RS03605 PF01476 LysM domain RY69_RS03630 PF02661 Fic/DOC family RY69_RS03630 PF13784 Fic/DOC family N-terminal RY69_RS03650 PF00589 Phage integrase family RY69_RS03650 PF02899 Phage integrase, N-terminal SAM-like domain RY69_RS03670 PF00180 Isocitrate/isopropylmalate dehydrogenase RY69_RS03675 PF00478 IMP dehydrogenase / GMP reductase domain RY69_RS03685 PF00501 AMP-binding enzyme RY69_RS03690 PF01327 Polypeptide deformylase RY69_RS03695 PF00318 Ribosomal protein S2 RY69_RS03700 PF00889 Elongation factor TS RY69_RS03705 PF00696 Amino acid kinase family RY69_RS03710 PF01765 Ribosome recycling factor RY69_RS03720 PF04055 Radical SAM superfamily RY69_RS03725 PF01965 DJ-1/PfpI family RY69_RS03730 PF00977 Histidine biosynthesis protein RY69_RS03735 PF01502 Phosphoribosyl-AMP cyclohydrolase RY69_RS03740 PF00425 chorismate binding enzyme RY69_RS03740 PF04715 Anthranilate synthase component I, N terminal region RY69_RS03760 PF04343 Protein of unknown function, DUF488 RY69_RS03770 PF00324 Amino acid permease RY69_RS03805 PF00005 ABC transporter RY69_RS03810 PF01695 IstB-like ATP binding protein RY69_RS03820 PF00005 ABC transporter RY69_RS03850 PF13732 Domain of unknown function (DUF4162) RY69_RS03850 PF00005 ABC transporter RY69_RS03890 PF02687 FtsX-like permease family RY69_RS03890 PF12704 MacB-like periplasmic core domain RY69_RS03890 PF00005 ABC transporter RY69_RS03895 PF00005 ABC transporter RY69_RS03910 PF00072 Response regulator receiver domain RY69_RS03910 PF00486 Transcriptional regulatory protein, C terminal RY69_RS03965 PF00324 Amino acid permease RY69_RS03970 PF01261 Xylose isomerase-like TIM barrel RY69_RS03975 PF02586 SOS response associated peptidase (SRAP) RY69_RS03980 PF00291 Pyridoxal-phosphate dependent enzyme RY69_RS03985 PF00290 Tryptophan synthase alpha chain RY69_RS03990 PF01790 Prolipoprotein diacylglyceryl transferase RY69_RS03995 PF00834 Ribulose-phosphate 3 epimerase family RY69_RS04000 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RY69_RS04005 PF08029 HisG, C-terminal domain RY69_RS04005 PF01634 ATP phosphoribosyltransferase RY69_RS04010 PF01066 CDP-alcohol phosphatidyltransferase RY69_RS04015 PF05949 Bacterial protein of unknown function (DUF881) RY69_RS04020 PF06947 Protein of unknown function (DUF1290) RY69_RS04030 PF00498 FHA domain RY69_RS04035 PF13411 MerR HTH family regulatory protein RY69_RS04050 PF13419 Haloacid dehalogenase-like hydrolase RY69_RS04055 PF13397 RNA polymerase-binding protein RY69_RS04060 PF00271 Helicase conserved C-terminal domain RY69_RS04060 PF08148 DSHCT (NUC185) domain RY69_RS04060 PF00270 DEAD/DEAH box helicase RY69_RS04090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RY69_RS04090 PF01926 50S ribosome-binding GTPase RY69_RS04095 PF00849 RNA pseudouridylate synthase RY69_RS04095 PF01479 S4 domain RY69_RS04100 PF00230 Major intrinsic protein RY69_RS04105 PF02142 MGS-like domain RY69_RS04105 PF01808 AICARFT/IMPCHase bienzyme RY69_RS04115 PF00549 CoA-ligase RY69_RS04115 PF02629 CoA binding domain RY69_RS04120 PF00549 CoA-ligase RY69_RS04120 PF08442 ATP-grasp domain RY69_RS04125 PF00156 Phosphoribosyl transferase domain RY69_RS04135 PF05491 RuvB C-terminal winged helix domain RY69_RS04135 PF05496 Holliday junction DNA helicase RuvB P-loop domain RY69_RS04135 PF17864 RuvB AAA lid domain RY69_RS04140 PF07499 RuvA, C-terminal domain RY69_RS04140 PF01330 RuvA N terminal domain RY69_RS04145 PF02075 Crossover junction endodeoxyribonuclease RuvC RY69_RS04150 PF01709 Transcriptional regulator RY69_RS04155 PF01230 HIT domain RY69_RS04160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RY69_RS04160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RY69_RS04160 PF03129 Anticodon binding domain RY69_RS04195 PF02673 Bacitracin resistance protein BacA RY69_RS04205 PF02899 Phage integrase, N-terminal SAM-like domain RY69_RS04205 PF00589 Phage integrase family RY69_RS04275 PF00436 Single-strand binding protein family RY69_RS04285 PF17762 HTH domain found in ParB protein RY69_RS04285 PF02195 ParB-like nuclease domain RY69_RS04305 PF00929 Exonuclease RY69_RS04445 PF01695 IstB-like ATP binding protein RY69_RS04470 PF01556 DnaJ C terminal domain RY69_RS04470 PF00684 DnaJ central domain RY69_RS04470 PF00226 DnaJ domain RY69_RS04475 PF01628 HrcA protein C terminal domain RY69_RS04480 PF00456 Transketolase, thiamine diphosphate binding domain RY69_RS04480 PF02780 Transketolase, C-terminal domain RY69_RS04480 PF02779 Transketolase, pyrimidine binding domain RY69_RS04485 PF00923 Transaldolase/Fructose-6-phosphate aldolase RY69_RS04490 PF05525 Branched-chain amino acid transport protein RY69_RS04500 PF00155 Aminotransferase class I and II RY69_RS04510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RY69_RS04510 PF00056 lactate/malate dehydrogenase, NAD binding domain RY69_RS04515 PF03840 Preprotein translocase SecG subunit RY69_RS04520 PF00121 Triosephosphate isomerase RY69_RS04525 PF00162 Phosphoglycerate kinase RY69_RS04530 PF10298 WhiA N-terminal LAGLIDADG-like domain RY69_RS04530 PF14527 WhiA LAGLIDADG-like domain RY69_RS04530 PF02650 WhiA C-terminal HTH domain RY69_RS04535 PF03668 P-loop ATPase protein family RY69_RS04540 PF01488 Shikimate / quinate 5-dehydrogenase RY69_RS04540 PF08501 Shikimate dehydrogenase substrate binding domain RY69_RS04540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RY69_RS04545 PF01541 GIY-YIG catalytic domain RY69_RS04545 PF02151 UvrB/uvrC motif RY69_RS04545 PF08459 UvrC Helix-hairpin-helix N-terminal RY69_RS04550 PF00005 ABC transporter RY69_RS04550 PF17755 UvrA DNA-binding domain RY69_RS04550 PF17760 UvrA interaction domain RY69_RS04555 PF00155 Aminotransferase class I and II RY69_RS04560 PF00005 ABC transporter RY69_RS04565 PF00106 short chain dehydrogenase RY69_RS04570 PF00005 ABC transporter RY69_RS04570 PF12848 ABC transporter RY69_RS04570 PF16326 ABC transporter C-terminal domain RY69_RS04575 PF03853 YjeF-related protein N-terminus RY69_RS04575 PF01256 Carbohydrate kinase RY69_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RY69_RS04585 PF03466 LysR substrate binding domain RY69_RS04600 PF00156 Phosphoribosyl transferase domain RY69_RS04605 PF01180 Dihydroorotate dehydrogenase RY69_RS04610 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B RY69_RS04615 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RY69_RS04620 PF01979 Amidohydrolase family RY69_RS04625 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain RY69_RS04625 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain RY69_RS04630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RY69_RS04630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RY69_RS04635 PF08335 GlnD PII-uridylyltransferase RY69_RS04635 PF03710 Glutamate-ammonia ligase adenylyltransferase RY69_RS04640 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RY69_RS04645 PF02219 Methylenetetrahydrofolate reductase RY69_RS04650 PF08267 Cobalamin-independent synthase, N-terminal domain RY69_RS04650 PF01717 Cobalamin-independent synthase, Catalytic domain RY69_RS04655 PF00300 Histidine phosphatase superfamily (branch 1) RY69_RS04660 PF08704 tRNA methyltransferase complex GCD14 subunit RY69_RS04675 PF03070 TENA/THI-4/PQQC family RY69_RS04685 PF01661 Macro domain RY69_RS04690 PF12146 Serine aminopeptidase, S33 RY69_RS04765 PF00578 AhpC/TSA family RY69_RS04785 PF00005 ABC transporter RY69_RS04790 PF00534 Glycosyl transferases group 1 RY69_RS04790 PF13439 Glycosyltransferase Family 4 RY69_RS04805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RY69_RS04815 PF07992 Pyridine nucleotide-disulphide oxidoreductase RY69_RS04815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RY69_RS04820 PF04898 Glutamate synthase central domain RY69_RS04820 PF01645 Conserved region in glutamate synthase RY69_RS04820 PF01493 GXGXG motif RY69_RS04820 PF00310 Glutamine amidotransferases class-II RY69_RS04825 PF00356 Bacterial regulatory proteins, lacI family RY69_RS04830 PF04055 Radical SAM superfamily RY69_RS04835 PF00679 Elongation factor G C-terminus RY69_RS04835 PF06421 GTP-binding protein LepA C-terminus RY69_RS04835 PF00009 Elongation factor Tu GTP binding domain RY69_RS04840 PF01649 Ribosomal protein S20 RY69_RS04845 PF03458 UPF0126 domain RY69_RS04850 PF03819 MazG nucleotide pyrophosphohydrolase domain RY69_RS04855 PF01063 Amino-transferase class IV RY69_RS04860 PF01386 Ribosomal L25p family RY69_RS04860 PF14693 Ribosomal protein TL5, C-terminal domain RY69_RS04870 PF02233 NAD(P) transhydrogenase beta subunit RY69_RS04875 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RY69_RS04880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RY69_RS04880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RY69_RS04885 PF00501 AMP-binding enzyme RY69_RS04890 PF01926 50S ribosome-binding GTPase RY69_RS04890 PF07650 KH domain RY69_RS04895 PF03471 Transporter associated domain RY69_RS04895 PF01595 Cyclin M transmembrane N-terminal domain RY69_RS04895 PF00571 CBS domain RY69_RS04900 PF02130 Uncharacterized protein family UPF0054 RY69_RS04905 PF02562 PhoH-like protein RY69_RS04910 PF01230 HIT domain RY69_RS04915 PF04452 RNA methyltransferase RY69_RS04925 PF00588 SpoU rRNA Methylase family RY69_RS04930 PF00483 Nucleotidyl transferase RY69_RS04935 PF01883 Iron-sulfur cluster assembly protein RY69_RS04945 PF00266 Aminotransferase class-V RY69_RS04950 PF00005 ABC transporter RY69_RS04955 PF01458 Uncharacterized protein family (UPF0051) RY69_RS04960 PF01458 Uncharacterized protein family (UPF0051) RY69_RS04970 PF00117 Glutamine amidotransferase class-I RY69_RS04970 PF06418 CTP synthase N-terminus RY69_RS04975 PF01220 Dehydroquinase class II RY69_RS04980 PF01202 Shikimate kinase RY69_RS04980 PF01761 3-dehydroquinate synthase RY69_RS04985 PF01264 Chorismate synthase RY69_RS05000 PF03652 Holliday junction resolvase RY69_RS05005 PF02272 DHHA1 domain RY69_RS05005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RY69_RS05005 PF01411 tRNA synthetases class II (A) RY69_RS05045 PF00589 Phage integrase family RY69_RS05045 PF02899 Phage integrase, N-terminal SAM-like domain RY69_RS05055 PF01527 Transposase RY69_RS05060 PF00860 Permease family RY69_RS05065 PF01979 Amidohydrolase family RY69_RS05070 PF07859 alpha/beta hydrolase fold RY69_RS05080 PF04198 Putative sugar-binding domain RY69_RS05080 PF13936 Helix-turn-helix domain RY69_RS05100 PF00665 Integrase core domain RY69_RS05100 PF13936 Helix-turn-helix domain RY69_RS05105 PF13936 Helix-turn-helix domain RY69_RS05135 PF07722 Peptidase C26 RY69_RS05140 PF00163 Ribosomal protein S4/S9 N-terminal domain RY69_RS05140 PF01479 S4 domain RY69_RS05145 PF00005 ABC transporter RY69_RS05145 PF12704 MacB-like periplasmic core domain RY69_RS05145 PF02687 FtsX-like permease family RY69_RS05160 PF13361 UvrD-like helicase C-terminal domain RY69_RS05160 PF00580 UvrD/REP helicase N-terminal domain RY69_RS05160 PF00580 UvrD/REP helicase N-terminal domain RY69_RS05160 PF13361 UvrD-like helicase C-terminal domain RY69_RS05165 PF00156 Phosphoribosyl transferase domain RY69_RS05170 PF00860 Permease family RY69_RS05175 PF13443 Cro/C1-type HTH DNA-binding domain RY69_RS05195 PF00857 Isochorismatase family RY69_RS05200 PF03575 Peptidase family S51 RY69_RS05215 PF17191 RecG wedge domain RY69_RS05215 PF13749 Putative ATP-dependent DNA helicase recG C-terminal RY69_RS05215 PF00270 DEAD/DEAH box helicase RY69_RS05230 PF00005 ABC transporter RY69_RS05235 PF00689 Cation transporting ATPase, C-terminus RY69_RS05235 PF00690 Cation transporter/ATPase, N-terminus RY69_RS05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS05240 PF07730 Histidine kinase RY69_RS05245 PF00072 Response regulator receiver domain RY69_RS05245 PF00196 Bacterial regulatory proteins, luxR family RY69_RS05255 PF01384 Phosphate transporter family RY69_RS05260 PF00128 Alpha amylase, catalytic domain RY69_RS05260 PF02903 Alpha amylase, N-terminal ig-like domain RY69_RS05265 PF00270 DEAD/DEAH box helicase RY69_RS05265 PF00271 Helicase conserved C-terminal domain RY69_RS05270 PF00860 Permease family RY69_RS05310 PF01925 Sulfite exporter TauE/SafE RY69_RS05315 PF04055 Radical SAM superfamily RY69_RS05315 PF13186 Iron-sulfur cluster-binding domain RY69_RS05320 PF00884 Sulfatase RY69_RS05320 PF16347 Domain of unknown function (DUF4976) RY69_RS05325 PF00083 Sugar (and other) transporter RY69_RS05335 PF00480 ROK family RY69_RS05340 PF00480 ROK family RY69_RS05340 PF01047 MarR family RY69_RS05345 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RY69_RS05350 PF01979 Amidohydrolase family RY69_RS05355 PF00343 Carbohydrate phosphorylase RY69_RS05360 PF07690 Major Facilitator Superfamily RY69_RS05365 PF00440 Bacterial regulatory proteins, tetR family RY69_RS05365 PF17932 Tetracyclin repressor-like, C-terminal domain RY69_RS05410 PF13784 Fic/DOC family N-terminal RY69_RS05410 PF02661 Fic/DOC family RY69_RS05415 PF17760 UvrA interaction domain RY69_RS05415 PF00005 ABC transporter RY69_RS05415 PF17755 UvrA DNA-binding domain RY69_RS05435 PF01926 50S ribosome-binding GTPase RY69_RS05435 PF06071 Protein of unknown function (DUF933) RY69_RS05440 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS05445 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS05450 PF00005 ABC transporter RY69_RS05455 PF00497 Bacterial extracellular solute-binding proteins, family 3 RY69_RS05460 PF14748 Pyrroline-5-carboxylate reductase dimerisation RY69_RS05460 PF03807 NADP oxidoreductase coenzyme F420-dependent RY69_RS05465 PF00561 alpha/beta hydrolase fold RY69_RS05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS05470 PF07730 Histidine kinase RY69_RS05470 PF05384 Sensor protein DegS RY69_RS05475 PF00072 Response regulator receiver domain RY69_RS05475 PF00196 Bacterial regulatory proteins, luxR family RY69_RS05480 PF12704 MacB-like periplasmic core domain RY69_RS05480 PF02687 FtsX-like permease family RY69_RS05480 PF00005 ABC transporter RY69_RS05485 PF00005 ABC transporter RY69_RS05490 PF01053 Cys/Met metabolism PLP-dependent enzyme RY69_RS05510 PF02021 Uncharacterised protein family UPF0102 RY69_RS05515 PF01078 Magnesium chelatase, subunit ChlI RY69_RS05515 PF13335 Magnesium chelatase, subunit ChlI C-terminal RY69_RS05520 PF17782 DprA winged helix domain RY69_RS05520 PF02481 DNA recombination-mediator protein A RY69_RS05525 PF00890 FAD binding domain RY69_RS05525 PF02910 Fumarate reductase flavoprotein C-term RY69_RS05540 PF03641 Possible lysine decarboxylase RY69_RS05545 PF06965 Na+/H+ antiporter 1 RY69_RS05550 PF00155 Aminotransferase class I and II RY69_RS05565 PF06689 ClpX C4-type zinc finger RY69_RS05565 PF07724 AAA domain (Cdc48 subfamily) RY69_RS05565 PF10431 C-terminal, D2-small domain, of ClpB protein RY69_RS05570 PF00574 Clp protease RY69_RS05575 PF00574 Clp protease RY69_RS05590 PF05697 Bacterial trigger factor protein (TF) RY69_RS05590 PF05698 Bacterial trigger factor protein (TF) C-terminus RY69_RS05590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RY69_RS05605 PF04055 Radical SAM superfamily RY69_RS05610 PF01228 Glycine radical RY69_RS05610 PF02901 Pyruvate formate lyase-like RY69_RS05620 PF02540 NAD synthase RY69_RS05620 PF00795 Carbon-nitrogen hydrolase RY69_RS05625 PF01546 Peptidase family M20/M25/M40 RY69_RS05625 PF07687 Peptidase dimerisation domain RY69_RS05630 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS05635 PF09383 NIL domain RY69_RS05635 PF00005 ABC transporter RY69_RS05640 PF03180 NLPA lipoprotein RY69_RS05660 PF00300 Histidine phosphatase superfamily (branch 1) RY69_RS05670 PF12804 MobA-like NTP transferase domain RY69_RS05670 PF00132 Bacterial transferase hexapeptide (six repeats) RY69_RS05675 PF09363 XFP C-terminal domain RY69_RS05675 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RY69_RS05675 PF09364 XFP N-terminal domain RY69_RS05680 PF02540 NAD synthase RY69_RS05680 PF00117 Glutamine amidotransferase class-I RY69_RS05680 PF00958 GMP synthase C terminal domain RY69_RS05685 PF01757 Acyltransferase family RY69_RS05690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RY69_RS05690 PF14572 Phosphoribosyl synthetase-associated domain RY69_RS05700 PF07085 DRTGG domain RY69_RS05700 PF01515 Phosphate acetyl/butaryl transferase RY69_RS05705 PF00871 Acetokinase family RY69_RS05710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RY69_RS05740 PF04972 BON domain RY69_RS05740 PF01476 LysM domain RY69_RS05755 PF02086 D12 class N6 adenine-specific DNA methyltransferase RY69_RS05780 PF03352 Methyladenine glycosylase RY69_RS05780 PF00117 Glutamine amidotransferase class-I RY69_RS05780 PF00958 GMP synthase C terminal domain RY69_RS05780 PF13302 Acetyltransferase (GNAT) domain RY69_RS05780 PF13673 Acetyltransferase (GNAT) domain RY69_RS05800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RY69_RS05800 PF00128 Alpha amylase, catalytic domain RY69_RS05805 PF00293 NUDIX domain RY69_RS05810 PF01784 NIF3 (NGG1p interacting factor 3) RY69_RS05815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RY69_RS05815 PF01367 5'-3' exonuclease, C-terminal SAM fold RY69_RS05815 PF00476 DNA polymerase family A RY69_RS05820 PF03861 ANTAR domain RY69_RS05820 PF00072 Response regulator receiver domain RY69_RS05830 PF00293 NUDIX domain RY69_RS05835 PF00224 Pyruvate kinase, barrel domain RY69_RS05835 PF02887 Pyruvate kinase, alpha/beta domain RY69_RS05840 PF03741 Integral membrane protein TerC family RY69_RS05845 PF00271 Helicase conserved C-terminal domain RY69_RS05845 PF17757 UvrB interaction domain RY69_RS05845 PF12344 Ultra-violet resistance protein B RY69_RS05845 PF02151 UvrB/uvrC motif RY69_RS05845 PF04851 Type III restriction enzyme, res subunit RY69_RS05850 PF01121 Dephospho-CoA kinase RY69_RS05855 PF00575 S1 RNA binding domain RY69_RS05860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RY69_RS05860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RY69_RS05870 PF00005 ABC transporter RY69_RS05875 PF00950 ABC 3 transport family RY69_RS05880 PF02542 YgbB family RY69_RS05885 PF02559 CarD-like/TRCF domain RY69_RS05890 PF00128 Alpha amylase, catalytic domain RY69_RS05890 PF02806 Alpha amylase, C-terminal all-beta domain RY69_RS05890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RY69_RS05895 PF00072 Response regulator receiver domain RY69_RS05895 PF00486 Transcriptional regulatory protein, C terminal RY69_RS05900 PF00512 His Kinase A (phospho-acceptor) domain RY69_RS05900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS05900 PF00672 HAMP domain RY69_RS05905 PF00156 Phosphoribosyl transferase domain RY69_RS05930 PF02467 Transcription factor WhiB RY69_RS05940 PF03816 Cell envelope-related transcriptional attenuator domain RY69_RS05945 PF01580 FtsK/SpoIIIE family RY69_RS05945 PF12538 DNA transporter RY69_RS05950 PF02467 Transcription factor WhiB RY69_RS05955 PF12282 Signal transduction histidine kinase RY69_RS05955 PF07568 Histidine kinase RY69_RS05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS05960 PF03006 Haemolysin-III related RY69_RS05965 PF03449 Transcription elongation factor, N-terminal RY69_RS05965 PF01272 Transcription elongation factor, GreA/GreB, C-term RY69_RS05970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RY69_RS05975 PF03313 Serine dehydratase alpha chain RY69_RS05975 PF03315 Serine dehydratase beta chain RY69_RS05990 PF02541 Ppx/GppA phosphatase family RY69_RS06005 PF03952 Enolase, N-terminal domain RY69_RS06005 PF00113 Enolase, C-terminal TIM barrel domain RY69_RS06010 PF00248 Aldo/keto reductase family RY69_RS06015 PF03461 TRCF domain RY69_RS06015 PF00271 Helicase conserved C-terminal domain RY69_RS06015 PF00270 DEAD/DEAH box helicase RY69_RS06015 PF02559 CarD-like/TRCF domain RY69_RS06015 PF17757 UvrB interaction domain RY69_RS06020 PF01195 Peptidyl-tRNA hydrolase RY69_RS06025 PF00027 Cyclic nucleotide-binding domain RY69_RS06025 PF13302 Acetyltransferase (GNAT) domain RY69_RS06030 PF03699 Uncharacterised protein family (UPF0182) RY69_RS06035 PF00933 Glycosyl hydrolase family 3 N terminal domain RY69_RS06040 PF01467 Cytidylyltransferase-like RY69_RS06050 PF00171 Aldehyde dehydrogenase family RY69_RS06055 PF00291 Pyridoxal-phosphate dependent enzyme RY69_RS06055 PF14821 Threonine synthase N terminus RY69_RS06070 PF00005 ABC transporter RY69_RS06075 PF00392 Bacterial regulatory proteins, gntR family RY69_RS06085 PF13419 Haloacid dehalogenase-like hydrolase RY69_RS06090 PF02463 RecF/RecN/SMC N terminal domain RY69_RS06095 PF01513 ATP-NAD kinase RY69_RS06110 PF01728 FtsJ-like methyltransferase RY69_RS06110 PF01479 S4 domain RY69_RS06125 PF00579 tRNA synthetases class I (W and Y) RY69_RS06125 PF01479 S4 domain RY69_RS06140 PF00581 Rhodanese-like domain RY69_RS06145 PF00899 ThiF family RY69_RS06150 PF05690 Thiazole biosynthesis protein ThiG RY69_RS06160 PF14698 Argininosuccinate lyase C-terminal RY69_RS06160 PF00206 Lyase RY69_RS06165 PF00764 Arginosuccinate synthase RY69_RS06170 PF02863 Arginine repressor, C-terminal domain RY69_RS06170 PF01316 Arginine repressor, DNA binding domain RY69_RS06175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RY69_RS06175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RY69_RS06180 PF00202 Aminotransferase class-III RY69_RS06185 PF00696 Amino acid kinase family RY69_RS06190 PF01960 ArgJ family RY69_RS06195 PF02774 Semialdehyde dehydrogenase, dimerisation domain RY69_RS06195 PF01118 Semialdehyde dehydrogenase, NAD binding domain RY69_RS06205 PF01588 Putative tRNA binding domain RY69_RS06205 PF03147 Ferredoxin-fold anticodon binding domain RY69_RS06205 PF03483 B3/4 domain RY69_RS06205 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RY69_RS06205 PF03484 tRNA synthetase B5 domain RY69_RS06210 PF01409 tRNA synthetases class II core domain (F) RY69_RS06210 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RY69_RS06215 PF00588 SpoU rRNA Methylase family RY69_RS06215 PF08032 RNA 2'-O ribose methyltransferase substrate binding RY69_RS06225 PF00005 ABC transporter RY69_RS06230 PF09819 ABC-type cobalt transport system, permease component RY69_RS06235 PF07687 Peptidase dimerisation domain RY69_RS06235 PF01546 Peptidase family M20/M25/M40 RY69_RS06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase RY69_RS06245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RY69_RS06255 PF03951 Glutamine synthetase, beta-Grasp domain RY69_RS06255 PF00120 Glutamine synthetase, catalytic domain RY69_RS06260 PF10609 NUBPL iron-transfer P-loop NTPase RY69_RS06260 PF01883 Iron-sulfur cluster assembly protein RY69_RS06265 PF01653 NAD-dependent DNA ligase adenylation domain RY69_RS06265 PF12826 Helix-hairpin-helix motif RY69_RS06265 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RY69_RS06265 PF03120 NAD-dependent DNA ligase OB-fold domain RY69_RS06265 PF00533 BRCA1 C Terminus (BRCT) domain RY69_RS06285 PF00005 ABC transporter RY69_RS06290 PF00155 Aminotransferase class I and II RY69_RS06300 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS06305 PF01255 Putative undecaprenyl diphosphate synthase RY69_RS06310 PF02565 Recombination protein O C terminal RY69_RS06310 PF11967 Recombination protein O N terminal RY69_RS06320 PF04551 GcpE protein RY69_RS06325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RY69_RS06325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RY69_RS06325 PF13288 DXP reductoisomerase C-terminal domain RY69_RS06340 PF11253 Protein of unknown function (DUF3052) RY69_RS06355 PF13361 UvrD-like helicase C-terminal domain RY69_RS06355 PF00580 UvrD/REP helicase N-terminal domain RY69_RS06355 PF00570 HRDC domain RY69_RS06380 PF01678 Diaminopimelate epimerase RY69_RS06385 PF01177 Asp/Glu/Hydantoin racemase RY69_RS06410 PF01053 Cys/Met metabolism PLP-dependent enzyme RY69_RS06420 PF03764 Elongation factor G, domain IV RY69_RS06420 PF00009 Elongation factor Tu GTP binding domain RY69_RS06420 PF00679 Elongation factor G C-terminus RY69_RS06420 PF14492 Elongation Factor G, domain II RY69_RS06430 PF07733 Bacterial DNA polymerase III alpha NTPase domain RY69_RS06430 PF02811 PHP domain RY69_RS06430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RY69_RS06430 PF00929 Exonuclease RY69_RS06430 PF14579 Helix-hairpin-helix motif RY69_RS06435 PF00625 Guanylate kinase RY69_RS06440 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RY69_RS06445 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RY69_RS06445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RY69_RS06445 PF02142 MGS-like domain RY69_RS06450 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RY69_RS06450 PF00117 Glutamine amidotransferase class-I RY69_RS06455 PF01029 NusB family RY69_RS06460 PF01132 Elongation factor P (EF-P) OB domain RY69_RS06460 PF09285 Elongation factor P, C-terminal RY69_RS06460 PF08207 Elongation factor P (EF-P) KOW-like domain RY69_RS06465 PF00005 ABC transporter RY69_RS06465 PF00664 ABC transporter transmembrane region RY69_RS06470 PF03649 Uncharacterised protein family (UPF0014) RY69_RS06475 PF17152 Periplasmic sensor domain RY69_RS06475 PF00990 Diguanylate cyclase, GGDEF domain RY69_RS06480 PF01527 Transposase RY69_RS06480 PF00665 Integrase core domain RY69_RS06480 PF13333 Integrase core domain RY69_RS06480 PF13276 HTH-like domain RY69_RS06495 PF00589 Phage integrase family RY69_RS06495 PF02899 Phage integrase, N-terminal SAM-like domain RY69_RS06500 PF00665 Integrase core domain RY69_RS06500 PF13333 Integrase core domain RY69_RS06500 PF01527 Transposase RY69_RS06500 PF13276 HTH-like domain RY69_RS06520 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS06525 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS06535 PF00356 Bacterial regulatory proteins, lacI family RY69_RS06540 PF00872 Transposase, Mutator family RY69_RS06575 PF00005 ABC transporter RY69_RS06575 PF17755 UvrA DNA-binding domain RY69_RS06575 PF17760 UvrA interaction domain RY69_RS06590 PF00107 Zinc-binding dehydrogenase RY69_RS06590 PF08240 Alcohol dehydrogenase GroES-like domain RY69_RS06600 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RY69_RS06605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RY69_RS06615 PF03601 Conserved hypothetical protein 698 RY69_RS06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RY69_RS06620 PF03466 LysR substrate binding domain RY69_RS06630 PF03143 Elongation factor Tu C-terminal domain RY69_RS06630 PF03144 Elongation factor Tu domain 2 RY69_RS06630 PF00009 Elongation factor Tu GTP binding domain RY69_RS06635 PF03144 Elongation factor Tu domain 2 RY69_RS06635 PF00679 Elongation factor G C-terminus RY69_RS06635 PF03764 Elongation factor G, domain IV RY69_RS06635 PF14492 Elongation Factor G, domain II RY69_RS06635 PF00009 Elongation factor Tu GTP binding domain RY69_RS06640 PF00177 Ribosomal protein S7p/S5e RY69_RS06645 PF00164 Ribosomal protein S12/S23 RY69_RS06670 PF00155 Aminotransferase class I and II RY69_RS06675 PF02222 ATP-grasp domain RY69_RS06680 PF01259 SAICAR synthetase RY69_RS06685 PF02769 AIR synthase related protein, C-terminal domain RY69_RS06685 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RY69_RS06685 PF00586 AIR synthase related protein, N-terminal domain RY69_RS06690 PF07859 alpha/beta hydrolase fold RY69_RS06740 PF11798 IMS family HHH motif RY69_RS06740 PF11799 impB/mucB/samB family C-terminal domain RY69_RS06740 PF00817 impB/mucB/samB family RY69_RS06745 PF00156 Phosphoribosyl transferase domain RY69_RS06745 PF13537 Glutamine amidotransferase domain RY69_RS06750 PF02769 AIR synthase related protein, C-terminal domain RY69_RS06750 PF00586 AIR synthase related protein, N-terminal domain RY69_RS06755 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RY69_RS06755 PF02844 Phosphoribosylglycinamide synthetase, N domain RY69_RS06755 PF02843 Phosphoribosylglycinamide synthetase, C domain RY69_RS06760 PF00171 Aldehyde dehydrogenase family RY69_RS06780 PF03773 Predicted permease RY69_RS06805 PF00005 ABC transporter RY69_RS06805 PF09383 NIL domain RY69_RS06825 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RY69_RS06825 PF02222 ATP-grasp domain RY69_RS06830 PF00731 AIR carboxylase RY69_RS06835 PF08240 Alcohol dehydrogenase GroES-like domain RY69_RS06835 PF00107 Zinc-binding dehydrogenase RY69_RS06840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RY69_RS06840 PF02779 Transketolase, pyrimidine binding domain RY69_RS06840 PF02780 Transketolase, C-terminal domain RY69_RS06845 PF02687 FtsX-like permease family RY69_RS06845 PF12704 MacB-like periplasmic core domain RY69_RS06845 PF02687 FtsX-like permease family RY69_RS06845 PF12704 MacB-like periplasmic core domain RY69_RS06855 PF12704 MacB-like periplasmic core domain RY69_RS06855 PF02687 FtsX-like permease family RY69_RS06855 PF00005 ABC transporter RY69_RS06860 PF01641 SelR domain RY69_RS06860 PF08534 Redoxin RY69_RS06860 PF01625 Peptide methionine sulfoxide reductase RY69_RS06865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RY69_RS06875 PF00128 Alpha amylase, catalytic domain RY69_RS06880 PF00356 Bacterial regulatory proteins, lacI family RY69_RS06880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RY69_RS06885 PF01547 Bacterial extracellular solute-binding protein RY69_RS06905 PF06964 Alpha-L-arabinofuranosidase C-terminal domain RY69_RS06905 PF02018 Carbohydrate binding domain RY69_RS06915 PF03600 Citrate transporter RY69_RS06920 PF00392 Bacterial regulatory proteins, gntR family RY69_RS06920 PF00155 Aminotransferase class I and II RY69_RS06925 PF01174 SNO glutamine amidotransferase family RY69_RS06930 PF01680 SOR/SNZ family RY69_RS06945 PF01807 CHC2 zinc finger RY69_RS06945 PF08275 DNA primase catalytic core, N-terminal domain RY69_RS06945 PF13662 Toprim domain RY69_RS06945 PF08278 DNA primase DnaG DnaB-binding RY69_RS06945 PF10410 DnaB-helicase binding domain of primase RY69_RS06950 PF01966 HD domain RY69_RS06950 PF13286 Phosphohydrolase-associated domain RY69_RS06955 PF00842 Alanine racemase, C-terminal domain RY69_RS06955 PF01168 Alanine racemase, N-terminal domain RY69_RS06960 PF13520 Amino acid permease RY69_RS06970 PF02664 S-Ribosylhomocysteinase (LuxS) RY69_RS06975 PF00270 DEAD/DEAH box helicase RY69_RS06975 PF00271 Helicase conserved C-terminal domain RY69_RS06975 PF09382 RQC domain RY69_RS06975 PF16124 RecQ zinc-binding RY69_RS06975 PF00570 HRDC domain RY69_RS06980 PF01053 Cys/Met metabolism PLP-dependent enzyme RY69_RS06985 PF00291 Pyridoxal-phosphate dependent enzyme RY69_RS06985 PF00571 CBS domain RY69_RS06990 PF00005 ABC transporter RY69_RS06990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RY69_RS06995 PF00005 ABC transporter RY69_RS06995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RY69_RS07000 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS07005 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS07010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RY69_RS07015 PF03309 Type III pantothenate kinase RY69_RS07025 PF01547 Bacterial extracellular solute-binding protein RY69_RS07030 PF08533 Beta-galactosidase C-terminal domain RY69_RS07030 PF08532 Beta-galactosidase trimerisation domain RY69_RS07030 PF02449 Beta-galactosidase RY69_RS07035 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS07040 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS07045 PF00356 Bacterial regulatory proteins, lacI family RY69_RS07045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RY69_RS07050 PF00849 RNA pseudouridylate synthase RY69_RS07055 PF01380 SIS domain RY69_RS07060 PF00005 ABC transporter RY69_RS07065 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS07070 PF00497 Bacterial extracellular solute-binding proteins, family 3 RY69_RS07080 PF01668 SmpB protein RY69_RS07085 PF01476 LysM domain RY69_RS07085 PF05257 CHAP domain RY69_RS07090 PF02687 FtsX-like permease family RY69_RS07090 PF18075 FtsX extracellular domain RY69_RS07095 PF00005 ABC transporter RY69_RS07100 PF00472 RF-1 domain RY69_RS07100 PF03462 PCRF domain RY69_RS07110 PF01327 Polypeptide deformylase RY69_RS07115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RY69_RS07115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RY69_RS07115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RY69_RS07115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RY69_RS07120 PF11838 ERAP1-like C-terminal domain RY69_RS07120 PF01433 Peptidase family M1 domain RY69_RS07125 PF12706 Beta-lactamase superfamily domain RY69_RS07125 PF17770 Ribonuclease J C-terminal domain RY69_RS07125 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RY69_RS07130 PF00701 Dihydrodipicolinate synthetase family RY69_RS07135 PF01113 Dihydrodipicolinate reductase, N-terminus RY69_RS07135 PF05173 Dihydrodipicolinate reductase, C-terminus RY69_RS07145 PF13361 UvrD-like helicase C-terminal domain RY69_RS07145 PF00580 UvrD/REP helicase N-terminal domain RY69_RS07155 PF03793 PASTA domain RY69_RS07155 PF00069 Protein kinase domain RY69_RS07160 PF07726 ATPase family associated with various cellular activities (AAA) RY69_RS07160 PF17863 AAA lid domain RY69_RS07175 PF04998 RNA polymerase Rpb1, domain 5 RY69_RS07175 PF05000 RNA polymerase Rpb1, domain 4 RY69_RS07175 PF04983 RNA polymerase Rpb1, domain 3 RY69_RS07175 PF00623 RNA polymerase Rpb1, domain 2 RY69_RS07175 PF04997 RNA polymerase Rpb1, domain 1 RY69_RS07180 PF04563 RNA polymerase beta subunit RY69_RS07180 PF04561 RNA polymerase Rpb2, domain 2 RY69_RS07180 PF00562 RNA polymerase Rpb2, domain 6 RY69_RS07180 PF04565 RNA polymerase Rpb2, domain 3 RY69_RS07180 PF04560 RNA polymerase Rpb2, domain 7 RY69_RS07180 PF10385 RNA polymerase beta subunit external 1 domain RY69_RS07190 PF00633 Helix-hairpin-helix motif RY69_RS07190 PF00730 HhH-GPD superfamily base excision DNA repair protein RY69_RS07195 PF00588 SpoU rRNA Methylase family RY69_RS07205 PF05167 Uncharacterised ACR (DUF711) RY69_RS07215 PF00288 GHMP kinases N terminal domain RY69_RS07215 PF08544 GHMP kinases C terminal RY69_RS07215 PF10509 Galactokinase galactose-binding signature RY69_RS07220 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RY69_RS07220 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RY69_RS07225 PF08220 DeoR-like helix-turn-helix domain RY69_RS07225 PF00455 DeoR C terminal sensor domain RY69_RS07230 PF01180 Dihydroorotate dehydrogenase RY69_RS07235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RY69_RS07240 PF00912 Transglycosylase RY69_RS07240 PF00905 Penicillin binding protein transpeptidase domain RY69_RS07245 PF00027 Cyclic nucleotide-binding domain RY69_RS07245 PF13545 Crp-like helix-turn-helix domain RY69_RS07250 PF10437 Bacterial lipoate protein ligase C-terminus RY69_RS07250 PF03099 Biotin/lipoate A/B protein ligase family RY69_RS07255 PF00180 Isocitrate/isopropylmalate dehydrogenase RY69_RS07260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RY69_RS07260 PF00326 Prolyl oligopeptidase family RY69_RS07270 PF01597 Glycine cleavage H-protein RY69_RS07275 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RY69_RS07275 PF00293 NUDIX domain RY69_RS07275 PF09297 NADH pyrophosphatase zinc ribbon domain RY69_RS07290 PF00085 Thioredoxin RY69_RS07305 PF13614 AAA domain RY69_RS07350 PF13333 Integrase core domain RY69_RS07350 PF13276 HTH-like domain RY69_RS07350 PF00665 Integrase core domain RY69_RS07370 PF00665 Integrase core domain RY69_RS07370 PF13936 Helix-turn-helix domain RY69_RS07375 PF01406 tRNA synthetases class I (C) catalytic domain RY69_RS07375 PF09190 DALR domain RY69_RS07380 PF00535 Glycosyl transferase family 2 RY69_RS07405 PF01501 Glycosyl transferase family 8 RY69_RS07405 PF00535 Glycosyl transferase family 2 RY69_RS07435 PF00535 Glycosyl transferase family 2 RY69_RS07440 PF01695 IstB-like ATP binding protein RY69_RS07450 PF01695 IstB-like ATP binding protein RY69_RS07475 PF00535 Glycosyl transferase family 2 RY69_RS07485 PF00535 Glycosyl transferase family 2 RY69_RS07485 PF01501 Glycosyl transferase family 8 RY69_RS07505 PF01451 Low molecular weight phosphotyrosine protein phosphatase RY69_RS07510 PF02397 Bacterial sugar transferase RY69_RS07520 PF07690 Major Facilitator Superfamily RY69_RS07525 PF03358 NADPH-dependent FMN reductase RY69_RS07525 PF01566 Natural resistance-associated macrophage protein RY69_RS07535 PF00248 Aldo/keto reductase family RY69_RS07540 PF07745 Glycosyl hydrolase family 53 RY69_RS07545 PF00356 Bacterial regulatory proteins, lacI family RY69_RS07550 PF02449 Beta-galactosidase RY69_RS07550 PF08532 Beta-galactosidase trimerisation domain RY69_RS07555 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS07570 PF00083 Sugar (and other) transporter RY69_RS07575 PF00005 ABC transporter RY69_RS07575 PF00664 ABC transporter transmembrane region RY69_RS07580 PF00083 Sugar (and other) transporter RY69_RS07585 PF00501 AMP-binding enzyme RY69_RS07595 PF00356 Bacterial regulatory proteins, lacI family RY69_RS07600 PF01351 Ribonuclease HII RY69_RS07605 PF10502 Signal peptidase, peptidase S26 RY69_RS07610 PF01245 Ribosomal protein L19 RY69_RS07620 PF00005 ABC transporter RY69_RS07625 PF00342 Phosphoglucose isomerase RY69_RS07645 PF01725 Ham1 family RY69_RS07650 PF03725 3' exoribonuclease family, domain 2 RY69_RS07650 PF01138 3' exoribonuclease family, domain 1 RY69_RS07655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RY69_RS07655 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RY69_RS07670 PF00248 Aldo/keto reductase family RY69_RS07680 PF01467 Cytidylyltransferase-like RY69_RS07690 PF02620 Large ribosomal RNA subunit accumulation protein YceD RY69_RS07695 PF01783 Ribosomal L32p protein family RY69_RS07700 PF14622 Ribonuclease-III-like RY69_RS07700 PF00035 Double-stranded RNA binding motif RY69_RS07705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RY69_RS07705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RY69_RS07705 PF00205 Thiamine pyrophosphate enzyme, central domain RY69_RS07710 PF10369 Small subunit of acetolactate synthase RY69_RS07720 PF01850 PIN domain RY69_RS07725 PF12848 ABC transporter RY69_RS07725 PF00005 ABC transporter RY69_RS07725 PF16326 ABC transporter C-terminal domain RY69_RS07730 PF00117 Glutamine amidotransferase class-I RY69_RS07730 PF00958 GMP synthase C terminal domain RY69_RS07735 PF09190 DALR domain RY69_RS07735 PF01406 tRNA synthetases class I (C) catalytic domain RY69_RS07745 PF02978 Signal peptide binding domain RY69_RS07745 PF02881 SRP54-type protein, helical bundle domain RY69_RS07745 PF00448 SRP54-type protein, GTPase domain RY69_RS07755 PF00886 Ribosomal protein S16 RY69_RS07765 PF01782 RimM N-terminal domain RY69_RS07770 PF01156 Inosine-uridine preferring nucleoside hydrolase RY69_RS07800 PF04011 LemA family RY69_RS07810 PF00005 ABC transporter RY69_RS07815 PF00013 KH domain RY69_RS07815 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RY69_RS07815 PF01138 3' exoribonuclease family, domain 1 RY69_RS07815 PF00575 S1 RNA binding domain RY69_RS07820 PF00312 Ribosomal protein S15 RY69_RS07860 PF02254 TrkA-N domain RY69_RS07860 PF02080 TrkA-C domain RY69_RS07860 PF00999 Sodium/hydrogen exchanger family RY69_RS07870 PF01648 4'-phosphopantetheinyl transferase superfamily RY69_RS07875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RY69_RS07875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RY69_RS07890 PF00872 Transposase, Mutator family RY69_RS07895 PF13173 AAA domain RY69_RS07895 PF13635 Domain of unknown function (DUF4143) RY69_RS07900 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS07905 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS07915 PF00884 Sulfatase RY69_RS07920 PF00356 Bacterial regulatory proteins, lacI family RY69_RS07925 PF13186 Iron-sulfur cluster-binding domain RY69_RS07925 PF04055 Radical SAM superfamily RY69_RS07930 PF01925 Sulfite exporter TauE/SafE RY69_RS07940 PF00206 Lyase RY69_RS07940 PF10415 Fumarase C C-terminus RY69_RS07955 PF08402 TOBE domain RY69_RS07955 PF00005 ABC transporter RY69_RS07975 PF01820 D-ala D-ala ligase N-terminus RY69_RS07975 PF07478 D-ala D-ala ligase C-terminus RY69_RS07980 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RY69_RS07980 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RY69_RS07990 PF01042 Endoribonuclease L-PSP RY69_RS08020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RY69_RS08025 PF01939 Endonuclease NucS RY69_RS08030 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RY69_RS08035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RY69_RS08035 PF02874 ATP synthase alpha/beta family, beta-barrel domain RY69_RS08040 PF00231 ATP synthase RY69_RS08045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RY69_RS08045 PF02874 ATP synthase alpha/beta family, beta-barrel domain RY69_RS08045 PF00306 ATP synthase alpha/beta chain, C terminal domain RY69_RS08050 PF00213 ATP synthase delta (OSCP) subunit RY69_RS08055 PF00430 ATP synthase B/B' CF(0) RY69_RS08060 PF00137 ATP synthase subunit C RY69_RS08065 PF00119 ATP synthase A chain RY69_RS08070 PF04204 Homoserine O-succinyltransferase RY69_RS08080 PF02899 Phage integrase, N-terminal SAM-like domain RY69_RS08080 PF00589 Phage integrase family RY69_RS08100 PF05257 CHAP domain RY69_RS08100 PF01476 LysM domain RY69_RS08300 PF00436 Single-strand binding protein family RY69_RS08350 PF00128 Alpha amylase, catalytic domain RY69_RS08350 PF11896 Domain of unknown function (DUF3416) RY69_RS08355 PF00719 Inorganic pyrophosphatase RY69_RS08360 PF02659 Putative manganese efflux pump RY69_RS08370 PF00486 Transcriptional regulatory protein, C terminal RY69_RS08375 PF00633 Helix-hairpin-helix motif RY69_RS08375 PF10576 Iron-sulfur binding domain of endonuclease III RY69_RS08375 PF00730 HhH-GPD superfamily base excision DNA repair protein RY69_RS08385 PF00133 tRNA synthetases class I (I, L, M and V) RY69_RS08385 PF08264 Anticodon-binding domain of tRNA RY69_RS08405 PF07497 Rho termination factor, RNA-binding domain RY69_RS08405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RY69_RS08405 PF07498 Rho termination factor, N-terminal domain RY69_RS08405 PF07497 Rho termination factor, RNA-binding domain RY69_RS08405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RY69_RS08405 PF07498 Rho termination factor, N-terminal domain RY69_RS08410 PF01593 Flavin containing amine oxidoreductase RY69_RS08415 PF10611 Protein of unknown function (DUF2469) RY69_RS08425 PF02934 GatB/GatE catalytic domain RY69_RS08425 PF02637 GatB domain RY69_RS08430 PF01425 Amidase RY69_RS08435 PF02686 Glu-tRNAGln amidotransferase C subunit RY69_RS08450 PF00005 ABC transporter RY69_RS08465 PF02646 RmuC family RY69_RS08470 PF02583 Metal-sensitive transcriptional repressor RY69_RS08475 PF00403 Heavy-metal-associated domain RY69_RS08480 PF00230 Major intrinsic protein RY69_RS08490 PF03948 Ribosomal protein L9, C-terminal domain RY69_RS08490 PF01281 Ribosomal protein L9, N-terminal domain RY69_RS08495 PF01084 Ribosomal protein S18 RY69_RS08500 PF00436 Single-strand binding protein family RY69_RS08505 PF01250 Ribosomal protein S6 RY69_RS08510 PF14572 Phosphoribosyl synthetase-associated domain RY69_RS08510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RY69_RS08515 PF01168 Alanine racemase, N-terminal domain RY69_RS08520 PF07944 Beta-L-arabinofuranosidase, GH127 RY69_RS08530 PF03109 ABC1 family RY69_RS08540 PF07685 CobB/CobQ-like glutamine amidotransferase domain RY69_RS08545 PF08353 Domain of unknown function (DUF1727) RY69_RS08545 PF08245 Mur ligase middle domain RY69_RS08550 PF00772 DnaB-like helicase N terminal domain RY69_RS08550 PF03796 DnaB-like helicase C terminal domain RY69_RS08560 PF08335 GlnD PII-uridylyltransferase RY69_RS08560 PF01909 Nucleotidyltransferase domain RY69_RS08560 PF01966 HD domain RY69_RS08565 PF00543 Nitrogen regulatory protein P-II RY69_RS08570 PF00909 Ammonium Transporter Family RY69_RS08575 PF00448 SRP54-type protein, GTPase domain RY69_RS08575 PF02881 SRP54-type protein, helical bundle domain RY69_RS08580 PF00440 Bacterial regulatory proteins, tetR family RY69_RS08585 PF01501 Glycosyl transferase family 8 RY69_RS08585 PF00535 Glycosyl transferase family 2 RY69_RS08590 PF03577 Peptidase family C69 RY69_RS08605 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RY69_RS08605 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RY69_RS08615 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RY69_RS08620 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RY69_RS08620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RY69_RS08630 PF01061 ABC-2 type transporter RY69_RS08635 PF01061 ABC-2 type transporter RY69_RS08640 PF00440 Bacterial regulatory proteins, tetR family RY69_RS08650 PF00005 ABC transporter RY69_RS08655 PF12704 MacB-like periplasmic core domain RY69_RS08655 PF02687 FtsX-like permease family RY69_RS08670 PF10634 Fe2+ transport protein RY69_RS08675 PF03239 Iron permease FTR1 family RY69_RS08700 PF00749 tRNA synthetases class I (E and Q), catalytic domain RY69_RS08740 PF01268 Formate--tetrahydrofolate ligase RY69_RS08745 PF03577 Peptidase family C69 RY69_RS08755 PF00391 PEP-utilising enzyme, mobile domain RY69_RS08755 PF05524 PEP-utilising enzyme, N-terminal RY69_RS08755 PF02896 PEP-utilising enzyme, TIM barrel domain RY69_RS08770 PF00356 Bacterial regulatory proteins, lacI family RY69_RS08775 PF12169 DNA polymerase III subunits gamma and tau domain III RY69_RS08780 PF02223 Thymidylate kinase RY69_RS08785 PF13368 Topoisomerase C-terminal repeat RY69_RS08785 PF01751 Toprim domain RY69_RS08785 PF01131 DNA topoisomerase RY69_RS08800 PF17092 Penicillin-binding protein OB-like domain RY69_RS08800 PF00905 Penicillin binding protein transpeptidase domain RY69_RS08800 PF00912 Transglycosylase RY69_RS08805 PF08502 LeuA allosteric (dimerisation) domain RY69_RS08805 PF00682 HMGL-like RY69_RS08815 PF07729 FCD domain RY69_RS08815 PF00392 Bacterial regulatory proteins, gntR family RY69_RS08835 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RY69_RS08840 PF00701 Dihydrodipicolinate synthetase family RY69_RS08845 PF00005 ABC transporter RY69_RS08845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RY69_RS08850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RY69_RS08850 PF00005 ABC transporter RY69_RS08855 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS08860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RY69_RS08870 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RY69_RS08875 PF00480 ROK family RY69_RS08890 PF02774 Semialdehyde dehydrogenase, dimerisation domain RY69_RS08890 PF01118 Semialdehyde dehydrogenase, NAD binding domain RY69_RS08895 PF00696 Amino acid kinase family RY69_RS08895 PF13840 ACT domain RY69_RS08895 PF01842 ACT domain RY69_RS08900 PF00696 Amino acid kinase family RY69_RS08900 PF01842 ACT domain RY69_RS08900 PF13840 ACT domain RY69_RS08920 PF13662 Toprim domain RY69_RS08920 PF02132 RecR protein RY69_RS08925 PF12169 DNA polymerase III subunits gamma and tau domain III RY69_RS08930 PF00440 Bacterial regulatory proteins, tetR family RY69_RS08930 PF16925 Tetracyclin repressor-like, C-terminal domain RY69_RS08935 PF00781 Diacylglycerol kinase catalytic domain RY69_RS08965 PF00437 Type II/IV secretion system protein RY69_RS08975 PF09335 SNARE associated Golgi protein RY69_RS08980 PF13419 Haloacid dehalogenase-like hydrolase RY69_RS09000 PF13411 MerR HTH family regulatory protein RY69_RS09005 PF01556 DnaJ C terminal domain RY69_RS09005 PF00226 DnaJ domain RY69_RS09010 PF01025 GrpE RY69_RS09015 PF00012 Hsp70 protein RY69_RS09020 PF12323 Helix-turn-helix domain RY69_RS09020 PF01385 Probable transposase RY69_RS09020 PF07282 Putative transposase DNA-binding domain RY69_RS09025 PF00239 Resolvase, N terminal domain RY69_RS09030 PF00356 Bacterial regulatory proteins, lacI family RY69_RS09045 PF00128 Alpha amylase, catalytic domain RY69_RS09045 PF03714 Bacterial pullanase-associated domain RY69_RS09045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RY69_RS09050 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS09055 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS09065 PF16657 Maltogenic Amylase, C-terminal domain RY69_RS09065 PF00128 Alpha amylase, catalytic domain RY69_RS09070 PF02446 4-alpha-glucanotransferase RY69_RS09090 PF00356 Bacterial regulatory proteins, lacI family RY69_RS09095 PF00128 Alpha amylase, catalytic domain RY69_RS09095 PF16657 Maltogenic Amylase, C-terminal domain RY69_RS09110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RY69_RS09110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RY69_RS09115 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RY69_RS09115 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RY69_RS09120 PF00083 Sugar (and other) transporter RY69_RS09120 PF07690 Major Facilitator Superfamily RY69_RS09125 PF00356 Bacterial regulatory proteins, lacI family RY69_RS09135 PF00128 Alpha amylase, catalytic domain RY69_RS09135 PF09244 Domain of unknown function (DUF1964) RY69_RS09140 PF00356 Bacterial regulatory proteins, lacI family RY69_RS09140 PF13407 Periplasmic binding protein domain RY69_RS09145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RY69_RS09150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RY69_RS09155 PF00654 Voltage gated chloride channel RY69_RS09160 PF00709 Adenylosuccinate synthetase RY69_RS09165 PF01116 Fructose-bisphosphate aldolase class-II RY69_RS09180 PF01435 Peptidase family M48 RY69_RS09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase RY69_RS09195 PF17820 PDZ domain RY69_RS09195 PF13180 PDZ domain RY69_RS09200 PF01702 Queuine tRNA-ribosyltransferase RY69_RS09215 PF01906 Putative heavy-metal-binding RY69_RS09220 PF00293 NUDIX domain RY69_RS09245 PF01641 SelR domain RY69_RS09245 PF08534 Redoxin RY69_RS09245 PF01625 Peptide methionine sulfoxide reductase RY69_RS09250 PF09924 Uncharacterised conserved protein (DUF2156) RY69_RS09255 PF00756 Putative esterase RY69_RS09270 PF00011 Hsp20/alpha crystallin family RY69_RS09280 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region RY69_RS09280 PF00326 Prolyl oligopeptidase family RY69_RS09300 PF01098 Cell cycle protein RY69_RS09305 PF00905 Penicillin binding protein transpeptidase domain RY69_RS09310 PF00069 Protein kinase domain RY69_RS09315 PF00069 Protein kinase domain RY69_RS09315 PF03793 PASTA domain RY69_RS09320 PF00117 Glutamine amidotransferase class-I RY69_RS09335 PF06781 Cell division protein CrgA RY69_RS09350 PF00343 Carbohydrate phosphorylase RY69_RS09370 PF00196 Bacterial regulatory proteins, luxR family RY69_RS09370 PF00072 Response regulator receiver domain RY69_RS09380 PF00579 tRNA synthetases class I (W and Y) RY69_RS09395 PF00474 Sodium:solute symporter family RY69_RS09405 PF00311 Phosphoenolpyruvate carboxylase RY69_RS09420 PF00990 Diguanylate cyclase, GGDEF domain RY69_RS09420 PF01590 GAF domain RY69_RS09420 PF00563 EAL domain RY69_RS09420 PF00360 Phytochrome region RY69_RS09465 PF07992 Pyridine nucleotide-disulphide oxidoreductase RY69_RS09470 PF00578 AhpC/TSA family RY69_RS09470 PF10417 C-terminal domain of 1-Cys peroxiredoxin RY69_RS09475 PF00484 Carbonic anhydrase RY69_RS09485 PF00571 CBS domain RY69_RS09485 PF01595 Cyclin M transmembrane N-terminal domain RY69_RS09485 PF03471 Transporter associated domain RY69_RS09490 PF00210 Ferritin-like domain RY69_RS09500 PF00356 Bacterial regulatory proteins, lacI family RY69_RS09525 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS09530 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS09545 PF00356 Bacterial regulatory proteins, lacI family RY69_RS09565 PF00356 Bacterial regulatory proteins, lacI family RY69_RS09580 PF13936 Helix-turn-helix domain RY69_RS09585 PF00210 Ferritin-like domain RY69_RS09620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RY69_RS09620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RY69_RS09630 PF16353 Domain of unknown function(DUF4981) RY69_RS09630 PF00703 Glycosyl hydrolases family 2 RY69_RS09630 PF02929 Beta galactosidase small chain RY69_RS09630 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RY69_RS09630 PF02837 Glycosyl hydrolases family 2, sugar binding domain RY69_RS09640 PF00356 Bacterial regulatory proteins, lacI family RY69_RS09650 PF03989 DNA gyrase C-terminal domain, beta-propeller RY69_RS09650 PF00521 DNA gyrase/topoisomerase IV, subunit A RY69_RS09655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RY69_RS09655 PF00204 DNA gyrase B RY69_RS09655 PF00986 DNA gyrase B subunit, carboxyl terminus RY69_RS09655 PF01751 Toprim domain RY69_RS09660 PF05258 Dna[CI] antecedent, DciA RY69_RS09665 PF02463 RecF/RecN/SMC N terminal domain RY69_RS09670 PF02767 DNA polymerase III beta subunit, central domain RY69_RS09670 PF02768 DNA polymerase III beta subunit, C-terminal domain RY69_RS09670 PF00712 DNA polymerase III beta subunit, N-terminal domain RY69_RS09675 PF00308 Bacterial dnaA protein RY69_RS09675 PF08299 Bacterial dnaA protein helix-turn-helix RY69_RS09680 PF00468 Ribosomal protein L34 RY69_RS09685 PF00825 Ribonuclease P RY69_RS09690 PF02096 60Kd inner membrane protein RY69_RS09695 PF01424 R3H domain RY69_RS09695 PF14804 Jag N-terminus RY69_RS09700 PF02527 rRNA small subunit methyltransferase G RY69_RS09705 PF13614 AAA domain RY69_RS09710 PF17762 HTH domain found in ParB protein RY69_RS09710 PF02195 ParB-like nuclease domain RY69_RS09715 PF07992 Pyridine nucleotide-disulphide oxidoreductase RY69_RS09730 PF00293 NUDIX domain RY69_RS09735 PF01743 Poly A polymerase head domain RY69_RS09735 PF12627 Probable RNA and SrmB- binding site of polymerase A RY69_RS09735 PF13735 tRNA nucleotidyltransferase domain 2 putative RY69_RS09745 PF00288 GHMP kinases N terminal domain RY69_RS09745 PF08544 GHMP kinases C terminal RY69_RS09750 PF00398 Ribosomal RNA adenine dimethylase RY69_RS09755 PF07501 G5 domain RY69_RS09755 PF06737 Transglycosylase-like domain RY69_RS09755 PF03990 G5-linked-Ubiquitin-like domain RY69_RS09770 PF00400 WD domain, G-beta repeat RY69_RS09770 PF00069 Protein kinase domain RY69_RS09775 PF00933 Glycosyl hydrolase family 3 N terminal domain RY69_RS09775 PF01915 Glycosyl hydrolase family 3 C-terminal domain RY69_RS09775 PF14310 Fibronectin type III-like domain RY69_RS09785 PF07972 NrdI Flavodoxin like RY69_RS09790 PF08343 Ribonucleotide reductase N-terminal RY69_RS09790 PF02867 Ribonucleotide reductase, barrel domain RY69_RS09790 PF00317 Ribonucleotide reductase, all-alpha domain RY69_RS09795 PF00268 Ribonucleotide reductase, small chain RY69_RS09800 PF00535 Glycosyl transferase family 2 RY69_RS09805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RY69_RS09815 PF03611 PTS system sugar-specific permease component RY69_RS09820 PF00392 Bacterial regulatory proteins, gntR family RY69_RS09820 PF07702 UTRA domain RY69_RS09825 PF00005 ABC transporter RY69_RS09825 PF17912 MalK OB fold domain RY69_RS09835 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RY69_RS09835 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RY69_RS09840 PF01263 Aldose 1-epimerase RY69_RS09845 PF08032 RNA 2'-O ribose methyltransferase substrate binding RY69_RS09845 PF00588 SpoU rRNA Methylase family RY69_RS09855 PF00367 phosphotransferase system, EIIB RY69_RS09855 PF02378 Phosphotransferase system, EIIC RY69_RS09860 PF02378 Phosphotransferase system, EIIC RY69_RS09860 PF00367 phosphotransferase system, EIIB RY69_RS09860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RY69_RS09870 PF00690 Cation transporter/ATPase, N-terminus RY69_RS09870 PF00689 Cation transporting ATPase, C-terminus RY69_RS09880 PF00692 dUTPase RY69_RS09895 PF01925 Sulfite exporter TauE/SafE RY69_RS09900 PF00999 Sodium/hydrogen exchanger family RY69_RS09905 PF14437 MafB19-like deaminase RY69_RS09905 PF11734 TilS substrate C-terminal domain RY69_RS09905 PF01171 PP-loop family RY69_RS09910 PF16874 Glycosyl hydrolase family 36 C-terminal domain RY69_RS09910 PF16875 Glycosyl hydrolase family 36 N-terminal domain RY69_RS09925 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS09930 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS09935 PF00128 Alpha amylase, catalytic domain RY69_RS09940 PF13291 ACT domain RY69_RS09940 PF00291 Pyridoxal-phosphate dependent enzyme RY69_RS09945 PF02146 Sir2 family RY69_RS09985 PF01061 ABC-2 type transporter RY69_RS09990 PF01061 ABC-2 type transporter RY69_RS09995 PF00881 Nitroreductase family RY69_RS10005 PF00300 Histidine phosphatase superfamily (branch 1) RY69_RS10015 PF00356 Bacterial regulatory proteins, lacI family RY69_RS10020 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS10035 PF00324 Amino acid permease RY69_RS10040 PF12704 MacB-like periplasmic core domain RY69_RS10040 PF02687 FtsX-like permease family RY69_RS10040 PF00005 ABC transporter RY69_RS10050 PF00324 Amino acid permease RY69_RS10055 PF01047 MarR family RY69_RS10060 PF00664 ABC transporter transmembrane region RY69_RS10060 PF00005 ABC transporter RY69_RS10065 PF00664 ABC transporter transmembrane region RY69_RS10065 PF00005 ABC transporter RY69_RS10085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RY69_RS10095 PF09334 tRNA synthetases class I (M) RY69_RS10095 PF08264 Anticodon-binding domain of tRNA RY69_RS10105 PF03051 Peptidase C1-like family RY69_RS10110 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS10115 PF12911 N-terminal TM domain of oligopeptide transport permease C RY69_RS10115 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS10120 PF00005 ABC transporter RY69_RS10120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RY69_RS10125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RY69_RS10150 PF08532 Beta-galactosidase trimerisation domain RY69_RS10150 PF08533 Beta-galactosidase C-terminal domain RY69_RS10150 PF02449 Beta-galactosidase RY69_RS10155 PF00356 Bacterial regulatory proteins, lacI family RY69_RS10165 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS10170 PF00528 Binding-protein-dependent transport system inner membrane component RY69_RS10190 PF00005 ABC transporter RY69_RS10190 PF00664 ABC transporter transmembrane region RY69_RS10195 PF00005 ABC transporter RY69_RS10195 PF00664 ABC transporter transmembrane region RY69_RS10200 PF01026 TatD related DNase RY69_RS10205 PF02705 K+ potassium transporter RY69_RS10220 PF00005 ABC transporter RY69_RS10225 PF02687 FtsX-like permease family RY69_RS10225 PF12704 MacB-like periplasmic core domain RY69_RS10230 PF00872 Transposase, Mutator family RY69_RS10240 PF03816 Cell envelope-related transcriptional attenuator domain RY69_RS10245 PF13173 AAA domain RY69_RS10245 PF13635 Domain of unknown function (DUF4143) RY69_RS10250 PF01183 Glycosyl hydrolases family 25 RY69_RS10250 PF01471 Putative peptidoglycan binding domain RY69_RS10255 PF00483 Nucleotidyl transferase RY69_RS10260 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RY69_RS10265 PF16363 GDP-mannose 4,6 dehydratase RY69_RS10270 PF01061 ABC-2 type transporter RY69_RS10275 PF00005 ABC transporter RY69_RS10275 PF14524 Wzt C-terminal domain RY69_RS10285 PF00535 Glycosyl transferase family 2 RY69_RS10300 PF01695 IstB-like ATP binding protein RY69_RS10335 PF01370 NAD dependent epimerase/dehydratase family RY69_RS10340 PF13333 Integrase core domain RY69_RS10340 PF00665 Integrase core domain RY69_RS10340 PF01527 Transposase RY69_RS10340 PF13276 HTH-like domain RY69_RS10345 PF13276 HTH-like domain RY69_RS10345 PF00665 Integrase core domain RY69_RS10345 PF13333 Integrase core domain RY69_RS10345 PF01527 Transposase RY69_RS10365 PF00872 Transposase, Mutator family RY69_RS10375 PF01501 Glycosyl transferase family 8 RY69_RS10375 PF00535 Glycosyl transferase family 2 RY69_RS10385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RY69_RS10385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RY69_RS10395 PF00005 ABC transporter RY69_RS10400 PF02653 Branched-chain amino acid transport system / permease component RY69_RS10405 PF02653 Branched-chain amino acid transport system / permease component RY69_RS10410 PF01418 Helix-turn-helix domain, rpiR family RY69_RS10410 PF01380 SIS domain RY69_RS10430 PF12728 Helix-turn-helix domain RY69_RS10435 PF03275 UDP-galactopyranose mutase RY69_RS10450 PF01557 Fumarylacetoacetate (FAA) hydrolase family RY69_RS10460 PF00004 ATPase family associated with various cellular activities (AAA) RY69_RS10460 PF07724 AAA domain (Cdc48 subfamily) RY69_RS10460 PF10431 C-terminal, D2-small domain, of ClpB protein RY69_RS10460 PF17871 AAA lid domain RY69_RS10460 PF02861 Clp amino terminal domain, pathogenicity island component RY69_RS10465 PF00749 tRNA synthetases class I (E and Q), catalytic domain RY69_RS10470 PF03009 Glycerophosphoryl diester phosphodiesterase family RY69_RS10475 PF02590 Predicted SPOUT methyltransferase RY69_RS10500 PF00293 NUDIX domain RY69_RS10500 PF00300 Histidine phosphatase superfamily (branch 1) RY69_RS10505 PF13089 Polyphosphate kinase N-terminal domain RY69_RS10505 PF17941 Polyphosphate kinase C-terminal domain 1 RY69_RS10505 PF13090 Polyphosphate kinase C-terminal domain 2 RY69_RS10505 PF02503 Polyphosphate kinase middle domain RY69_RS10520 PF00330 Aconitase family (aconitate hydratase) RY69_RS10525 PF00694 Aconitase C-terminal domain