locus-tag class description BBDE_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix BBDE_RS00005 PF00308 Bacterial dnaA protein BBDE_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BBDE_RS00010 PF02767 DNA polymerase III beta subunit, central domain BBDE_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BBDE_RS00015 PF02463 RecF/RecN/SMC N terminal domain BBDE_RS00020 PF05258 Dna[CI] antecedent, DciA BBDE_RS00025 PF00204 DNA gyrase B BBDE_RS00025 PF01751 Toprim domain BBDE_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus BBDE_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A BBDE_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller BBDE_RS00040 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BBDE_RS00040 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BBDE_RS00045 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS00060 PF00294 pfkB family carbohydrate kinase BBDE_RS00065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BBDE_RS00070 PF01380 SIS domain BBDE_RS00075 PF01741 Large-conductance mechanosensitive channel, MscL BBDE_RS00100 PF00210 Ferritin-like domain BBDE_RS00105 PF00571 CBS domain BBDE_RS00105 PF03471 Transporter associated domain BBDE_RS00105 PF01595 Cyclin M transmembrane N-terminal domain BBDE_RS00110 PF00484 Carbonic anhydrase BBDE_RS00120 PF00311 Phosphoenolpyruvate carboxylase BBDE_RS00130 PF00474 Sodium:solute symporter family BBDE_RS00135 PF00579 tRNA synthetases class I (W and Y) BBDE_RS00150 PF00343 Carbohydrate phosphorylase BBDE_RS00170 PF06781 Cell division protein CrgA BBDE_RS00180 PF04203 Sortase domain BBDE_RS00185 PF00117 Glutamine amidotransferase class-I BBDE_RS00190 PF00069 Protein kinase domain BBDE_RS00190 PF03793 PASTA domain BBDE_RS00195 PF00069 Protein kinase domain BBDE_RS00200 PF00905 Penicillin binding protein transpeptidase domain BBDE_RS00205 PF01098 Cell cycle protein BBDE_RS00225 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BBDE_RS00225 PF00326 Prolyl oligopeptidase family BBDE_RS00230 PF01061 ABC-2 type transporter BBDE_RS00235 PF01061 ABC-2 type transporter BBDE_RS00245 PF00155 Aminotransferase class I and II BBDE_RS00250 PF00892 EamA-like transporter family BBDE_RS00255 PF13460 NAD(P)H-binding BBDE_RS00260 PF01638 HxlR-like helix-turn-helix BBDE_RS00270 PF01702 Queuine tRNA-ribosyltransferase BBDE_RS00275 PF17820 PDZ domain BBDE_RS00275 PF13180 PDZ domain BBDE_RS00280 PF00403 Heavy-metal-associated domain BBDE_RS00285 PF00710 Asparaginase, N-terminal BBDE_RS00285 PF17763 Glutaminase/Asparaginase C-terminal domain BBDE_RS00290 PF00324 Amino acid permease BBDE_RS00300 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBDE_RS00310 PF01435 Peptidase family M48 BBDE_RS00320 PF14659 Phage integrase, N-terminal SAM-like domain BBDE_RS00320 PF00589 Phage integrase family BBDE_RS00350 PF03176 MMPL family BBDE_RS00355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BBDE_RS00355 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBDE_RS00385 PF03432 Relaxase/Mobilisation nuclease domain BBDE_RS00400 PF01381 Helix-turn-helix BBDE_RS00405 PF00892 EamA-like transporter family BBDE_RS00415 PF01116 Fructose-bisphosphate aldolase class-II BBDE_RS00420 PF01522 Polysaccharide deacetylase BBDE_RS00425 PF00709 Adenylosuccinate synthetase BBDE_RS00430 PF00654 Voltage gated chloride channel BBDE_RS00435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BBDE_RS00440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BBDE_RS00445 PF02653 Branched-chain amino acid transport system / permease component BBDE_RS00455 PF12399 Branched-chain amino acid ATP-binding cassette transporter BBDE_RS00455 PF00005 ABC transporter BBDE_RS00460 PF00005 ABC transporter BBDE_RS00475 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS00475 PF13407 Periplasmic binding protein domain BBDE_RS00485 PF07286 Protein of unknown function (DUF1445) BBDE_RS00490 PF03746 LamB/YcsF family BBDE_RS00495 PF02626 Carboxyltransferase domain, subdomain A and B BBDE_RS00500 PF02785 Biotin carboxylase C-terminal domain BBDE_RS00500 PF00289 Biotin carboxylase, N-terminal domain BBDE_RS00500 PF00364 Biotin-requiring enzyme BBDE_RS00500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBDE_RS00510 PF09244 Domain of unknown function (DUF1964) BBDE_RS00510 PF00128 Alpha amylase, catalytic domain BBDE_RS00520 PF16657 Maltogenic Amylase, C-terminal domain BBDE_RS00520 PF00128 Alpha amylase, catalytic domain BBDE_RS00530 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS00535 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS00550 PF00083 Sugar (and other) transporter BBDE_RS00550 PF07690 Major Facilitator Superfamily BBDE_RS00555 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BBDE_RS00555 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BBDE_RS00560 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BBDE_RS00560 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BBDE_RS00570 PF13333 Integrase core domain BBDE_RS00570 PF13276 HTH-like domain BBDE_RS00570 PF00665 Integrase core domain BBDE_RS00585 PF00232 Glycosyl hydrolase family 1 BBDE_RS00595 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS00610 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS00630 PF16875 Glycosyl hydrolase family 36 N-terminal domain BBDE_RS00630 PF16874 Glycosyl hydrolase family 36 C-terminal domain BBDE_RS00635 PF00324 Amino acid permease BBDE_RS00640 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS00645 PF01547 Bacterial extracellular solute-binding protein BBDE_RS00650 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS00655 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS00690 PF00324 Amino acid permease BBDE_RS00695 PF05690 Thiazole biosynthesis protein ThiG BBDE_RS00700 PF00899 ThiF family BBDE_RS00715 PF01047 MarR family BBDE_RS00720 PF00005 ABC transporter BBDE_RS00720 PF00664 ABC transporter transmembrane region BBDE_RS00725 PF00664 ABC transporter transmembrane region BBDE_RS00725 PF00005 ABC transporter BBDE_RS00745 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS00755 PF08531 Alpha-L-rhamnosidase N-terminal domain BBDE_RS00755 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain BBDE_RS00755 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain BBDE_RS00755 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain BBDE_RS00765 PF03239 Iron permease FTR1 family BBDE_RS00770 PF10634 Fe2+ transport protein BBDE_RS00785 PF12704 MacB-like periplasmic core domain BBDE_RS00785 PF02687 FtsX-like permease family BBDE_RS00790 PF00005 ABC transporter BBDE_RS00790 PF02687 FtsX-like permease family BBDE_RS00790 PF12704 MacB-like periplasmic core domain BBDE_RS00800 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS00805 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS00810 PF00005 ABC transporter BBDE_RS00815 PF02653 Branched-chain amino acid transport system / permease component BBDE_RS00820 PF13407 Periplasmic binding protein domain BBDE_RS00825 PF05025 RbsD / FucU transport protein family BBDE_RS00830 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS00835 PF01061 ABC-2 type transporter BBDE_RS00860 PF00462 Glutaredoxin BBDE_RS00875 PF03577 Peptidase family C69 BBDE_RS00875 PF03577 Peptidase family C69 BBDE_RS00880 PF00535 Glycosyl transferase family 2 BBDE_RS00885 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS00890 PF02881 SRP54-type protein, helical bundle domain BBDE_RS00890 PF00448 SRP54-type protein, GTPase domain BBDE_RS00895 PF00999 Sodium/hydrogen exchanger family BBDE_RS00900 PF00909 Ammonium Transporter Family BBDE_RS00905 PF00543 Nitrogen regulatory protein P-II BBDE_RS00910 PF08335 GlnD PII-uridylyltransferase BBDE_RS00910 PF01909 Nucleotidyltransferase domain BBDE_RS00910 PF01966 HD domain BBDE_RS00920 PF03796 DnaB-like helicase C terminal domain BBDE_RS00920 PF00772 DnaB-like helicase N terminal domain BBDE_RS00925 PF08245 Mur ligase middle domain BBDE_RS00925 PF08353 Domain of unknown function (DUF1727) BBDE_RS00930 PF07685 CobB/CobQ-like glutamine amidotransferase domain BBDE_RS00940 PF03109 ABC1 family BBDE_RS00965 PF03009 Glycerophosphoryl diester phosphodiesterase family BBDE_RS00980 PF00293 NUDIX domain BBDE_RS00980 PF00300 Histidine phosphatase superfamily (branch 1) BBDE_RS00985 PF13090 Polyphosphate kinase C-terminal domain 2 BBDE_RS00985 PF17941 Polyphosphate kinase C-terminal domain 1 BBDE_RS00985 PF02503 Polyphosphate kinase middle domain BBDE_RS00985 PF13089 Polyphosphate kinase N-terminal domain BBDE_RS00990 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS00995 PF14310 Fibronectin type III-like domain BBDE_RS00995 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS00995 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS01010 PF00437 Type II/IV secretion system protein BBDE_RS01040 PF00781 Diacylglycerol kinase catalytic domain BBDE_RS01045 PF00072 Response regulator receiver domain BBDE_RS01045 PF04397 LytTr DNA-binding domain BBDE_RS01055 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS01055 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS01055 PF14310 Fibronectin type III-like domain BBDE_RS01065 PF02837 Glycosyl hydrolases family 2, sugar binding domain BBDE_RS01065 PF16355 Domain of unknown function (DUF4982) BBDE_RS01065 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BBDE_RS01065 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BBDE_RS01065 PF00703 Glycosyl hydrolases family 2 BBDE_RS01080 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS01080 PF13977 BetI-type transcriptional repressor, C-terminal BBDE_RS01085 PF12833 Helix-turn-helix domain BBDE_RS01085 PF02805 Metal binding domain of Ada BBDE_RS01090 PF16875 Glycosyl hydrolase family 36 N-terminal domain BBDE_RS01090 PF16874 Glycosyl hydrolase family 36 C-terminal domain BBDE_RS01095 PF12169 DNA polymerase III subunits gamma and tau domain III BBDE_RS01100 PF02132 RecR protein BBDE_RS01100 PF13662 Toprim domain BBDE_RS01105 PF00696 Amino acid kinase family BBDE_RS01105 PF13840 ACT domain BBDE_RS01105 PF01842 ACT domain BBDE_RS01110 PF01842 ACT domain BBDE_RS01110 PF00696 Amino acid kinase family BBDE_RS01110 PF13840 ACT domain BBDE_RS01115 PF02774 Semialdehyde dehydrogenase, dimerisation domain BBDE_RS01115 PF01118 Semialdehyde dehydrogenase, NAD binding domain BBDE_RS01130 PF00682 HMGL-like BBDE_RS01130 PF08502 LeuA allosteric (dimerisation) domain BBDE_RS01135 PF16369 C-terminal lipocalin-like domain BBDE_RS01135 PF04616 Glycosyl hydrolases family 43 BBDE_RS01145 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS01150 PF04616 Glycosyl hydrolases family 43 BBDE_RS01150 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain BBDE_RS01160 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS01165 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS01175 PF00912 Transglycosylase BBDE_RS01175 PF00905 Penicillin binding protein transpeptidase domain BBDE_RS01180 PF01658 Myo-inositol-1-phosphate synthase BBDE_RS01185 PF03275 UDP-galactopyranose mutase BBDE_RS01195 PF01131 DNA topoisomerase BBDE_RS01195 PF01751 Toprim domain BBDE_RS01195 PF13368 Topoisomerase C-terminal repeat BBDE_RS01200 PF02223 Thymidylate kinase BBDE_RS01205 PF12169 DNA polymerase III subunits gamma and tau domain III BBDE_RS01210 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS01215 PF00381 PTS HPr component phosphorylation site BBDE_RS01220 PF00391 PEP-utilising enzyme, mobile domain BBDE_RS01220 PF05524 PEP-utilising enzyme, N-terminal BBDE_RS01220 PF02896 PEP-utilising enzyme, TIM barrel domain BBDE_RS01230 PF03577 Peptidase family C69 BBDE_RS01235 PF01268 Formate--tetrahydrofolate ligase BBDE_RS01265 PF05656 Protein of unknown function (DUF805) BBDE_RS01270 PF00749 tRNA synthetases class I (E and Q), catalytic domain BBDE_RS01295 PF00330 Aconitase family (aconitate hydratase) BBDE_RS01300 PF00694 Aconitase C-terminal domain BBDE_RS01320 PF06580 Histidine kinase BBDE_RS01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS01325 PF01180 Dihydroorotate dehydrogenase BBDE_RS01330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBDE_RS01365 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BBDE_RS01365 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BBDE_RS01370 PF01820 D-ala D-ala ligase N-terminus BBDE_RS01370 PF07478 D-ala D-ala ligase C-terminus BBDE_RS01390 PF08402 TOBE domain BBDE_RS01390 PF00005 ABC transporter BBDE_RS01430 PF00155 Aminotransferase class I and II BBDE_RS01435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BBDE_RS01435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BBDE_RS01440 PF02447 GntP family permease BBDE_RS01465 PF11700 Vacuole effluxer Atg22 like BBDE_RS01475 PF00830 Ribosomal L28 family BBDE_RS01480 PF00271 Helicase conserved C-terminal domain BBDE_RS01480 PF00270 DEAD/DEAH box helicase BBDE_RS01480 PF17191 RecG wedge domain BBDE_RS01490 PF01746 tRNA (Guanine-1)-methyltransferase BBDE_RS01495 PF10415 Fumarase C C-terminus BBDE_RS01495 PF00206 Lyase BBDE_RS01500 PF01782 RimM N-terminal domain BBDE_RS01510 PF00886 Ribosomal protein S16 BBDE_RS01520 PF02881 SRP54-type protein, helical bundle domain BBDE_RS01520 PF02978 Signal peptide binding domain BBDE_RS01520 PF00448 SRP54-type protein, GTPase domain BBDE_RS01525 PF09190 DALR domain BBDE_RS01525 PF01406 tRNA synthetases class I (C) catalytic domain BBDE_RS01530 PF00117 Glutamine amidotransferase class-I BBDE_RS01530 PF00958 GMP synthase C terminal domain BBDE_RS01530 PF02540 NAD synthase BBDE_RS01535 PF16326 ABC transporter C-terminal domain BBDE_RS01535 PF00005 ABC transporter BBDE_RS01535 PF12848 ABC transporter BBDE_RS01540 PF01842 ACT domain BBDE_RS01540 PF10369 Small subunit of acetolactate synthase BBDE_RS01545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBDE_RS01545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBDE_RS01545 PF00205 Thiamine pyrophosphate enzyme, central domain BBDE_RS01550 PF00035 Double-stranded RNA binding motif BBDE_RS01550 PF14622 Ribonuclease-III-like BBDE_RS01555 PF01783 Ribosomal L32p protein family BBDE_RS01560 PF02620 Large ribosomal RNA subunit accumulation protein YceD BBDE_RS01570 PF01467 Cytidylyltransferase-like BBDE_RS01580 PF00248 Aldo/keto reductase family BBDE_RS01585 PF13411 MerR HTH family regulatory protein BBDE_RS01590 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BBDE_RS01590 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BBDE_RS01595 PF03725 3' exoribonuclease family, domain 2 BBDE_RS01595 PF01138 3' exoribonuclease family, domain 1 BBDE_RS01600 PF01725 Ham1 family BBDE_RS01620 PF00483 Nucleotidyl transferase BBDE_RS01620 PF01050 Mannose-6-phosphate isomerase BBDE_RS01625 PF00342 Phosphoglucose isomerase BBDE_RS01630 PF01245 Ribosomal protein L19 BBDE_RS01635 PF10502 Signal peptidase, peptidase S26 BBDE_RS01640 PF01351 Ribonuclease HII BBDE_RS01645 PF00005 ABC transporter BBDE_RS01660 PF07687 Peptidase dimerisation domain BBDE_RS01660 PF01546 Peptidase family M20/M25/M40 BBDE_RS01665 PF10150 Ribonuclease E/G family BBDE_RS01670 PF00829 Ribosomal prokaryotic L21 protein BBDE_RS01675 PF01016 Ribosomal L27 protein BBDE_RS01680 PF09269 Domain of unknown function (DUF1967) BBDE_RS01680 PF01018 GTP1/OBG BBDE_RS01680 PF01926 50S ribosome-binding GTPase BBDE_RS01685 PF01472 PUA domain BBDE_RS01685 PF00696 Amino acid kinase family BBDE_RS01690 PF00155 Aminotransferase class I and II BBDE_RS01705 PF02357 Transcription termination factor nusG BBDE_RS01710 PF03946 Ribosomal protein L11, N-terminal domain BBDE_RS01710 PF00298 Ribosomal protein L11, RNA binding domain BBDE_RS01715 PF00687 Ribosomal protein L1p/L10e family BBDE_RS01720 PF17853 GGDEF-like domain BBDE_RS01720 PF13556 PucR C-terminal helix-turn-helix domain BBDE_RS01730 PF03099 Biotin/lipoate A/B protein ligase family BBDE_RS01730 PF02237 Biotin protein ligase C terminal domain BBDE_RS01730 PF08279 HTH domain BBDE_RS01735 PF02632 BioY family BBDE_RS01740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBDE_RS01740 PF02785 Biotin carboxylase C-terminal domain BBDE_RS01740 PF00289 Biotin carboxylase, N-terminal domain BBDE_RS01740 PF00364 Biotin-requiring enzyme BBDE_RS01745 PF01039 Carboxyl transferase domain BBDE_RS01755 PF01648 4'-phosphopantetheinyl transferase superfamily BBDE_RS01760 PF00128 Alpha amylase, catalytic domain BBDE_RS01775 PF00312 Ribosomal protein S15 BBDE_RS01780 PF01138 3' exoribonuclease family, domain 1 BBDE_RS01780 PF00575 S1 RNA binding domain BBDE_RS01780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BBDE_RS01780 PF00013 KH domain BBDE_RS01785 PF04011 LemA family BBDE_RS01795 PF00248 Aldo/keto reductase family BBDE_RS01805 PF00392 Bacterial regulatory proteins, gntR family BBDE_RS01805 PF00155 Aminotransferase class I and II BBDE_RS01810 PF13520 Amino acid permease BBDE_RS01815 PF12833 Helix-turn-helix domain BBDE_RS01815 PF14525 AraC-binding-like domain BBDE_RS01820 PF01136 Peptidase family U32 BBDE_RS01820 PF16325 Peptidase family U32 C-terminal domain BBDE_RS01825 PF02578 Multi-copper polyphenol oxidoreductase laccase BBDE_RS01830 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BBDE_RS01835 PF01470 Pyroglutamyl peptidase BBDE_RS01845 PF03051 Peptidase C1-like family BBDE_RS01850 PF00793 DAHP synthetase I family BBDE_RS01855 PF00793 DAHP synthetase I family BBDE_RS01860 PF01048 Phosphorylase superfamily BBDE_RS01865 PF00512 His Kinase A (phospho-acceptor) domain BBDE_RS01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS01870 PF00072 Response regulator receiver domain BBDE_RS01870 PF00486 Transcriptional regulatory protein, C terminal BBDE_RS01875 PF12849 PBP superfamily domain BBDE_RS01885 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS01890 PF00005 ABC transporter BBDE_RS01900 PF00860 Permease family BBDE_RS01905 PF00466 Ribosomal protein L10 BBDE_RS01910 PF00542 Ribosomal protein L7/L12 C-terminal domain BBDE_RS01910 PF16320 Ribosomal protein L7/L12 dimerisation domain BBDE_RS01915 PF01554 MatE BBDE_RS01945 PF01812 5-formyltetrahydrofolate cyclo-ligase family BBDE_RS01960 PF00166 Chaperonin 10 Kd subunit BBDE_RS01965 PF01053 Cys/Met metabolism PLP-dependent enzyme BBDE_RS01985 PF00471 Ribosomal protein L33 BBDE_RS01990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BBDE_RS01990 PF01565 FAD binding domain BBDE_RS01995 PF13520 Amino acid permease BBDE_RS02000 PF00037 4Fe-4S binding domain BBDE_RS02005 PF00155 Aminotransferase class I and II BBDE_RS02010 PF11798 IMS family HHH motif BBDE_RS02010 PF11799 impB/mucB/samB family C-terminal domain BBDE_RS02010 PF00817 impB/mucB/samB family BBDE_RS02015 PF00892 EamA-like transporter family BBDE_RS02030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBDE_RS02030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBDE_RS02035 PF09186 Domain of unknown function (DUF1949) BBDE_RS02035 PF01205 Uncharacterized protein family UPF0029 BBDE_RS02045 PF02446 4-alpha-glucanotransferase BBDE_RS02050 PF00572 Ribosomal protein L13 BBDE_RS02055 PF00380 Ribosomal protein S9/S16 BBDE_RS02060 PF00128 Alpha amylase, catalytic domain BBDE_RS02060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBDE_RS02065 PF00107 Zinc-binding dehydrogenase BBDE_RS02065 PF08240 Alcohol dehydrogenase GroES-like domain BBDE_RS02070 PF07690 Major Facilitator Superfamily BBDE_RS02080 PF00171 Aldehyde dehydrogenase family BBDE_RS02080 PF00465 Iron-containing alcohol dehydrogenase BBDE_RS02090 PF00338 Ribosomal protein S10p/S20e BBDE_RS02095 PF00297 Ribosomal protein L3 BBDE_RS02100 PF00573 Ribosomal protein L4/L1 family BBDE_RS02105 PF00276 Ribosomal protein L23 BBDE_RS02110 PF00181 Ribosomal Proteins L2, RNA binding domain BBDE_RS02110 PF03947 Ribosomal Proteins L2, C-terminal domain BBDE_RS02115 PF00203 Ribosomal protein S19 BBDE_RS02120 PF00237 Ribosomal protein L22p/L17e BBDE_RS02125 PF00189 Ribosomal protein S3, C-terminal domain BBDE_RS02125 PF07650 KH domain BBDE_RS02130 PF00252 Ribosomal protein L16p/L10e BBDE_RS02135 PF00831 Ribosomal L29 protein BBDE_RS02140 PF00366 Ribosomal protein S17 BBDE_RS02145 PF00238 Ribosomal protein L14p/L23e BBDE_RS02150 PF00467 KOW motif BBDE_RS02150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BBDE_RS02155 PF00673 ribosomal L5P family C-terminus BBDE_RS02155 PF00281 Ribosomal protein L5 BBDE_RS02160 PF00253 Ribosomal protein S14p/S29e BBDE_RS02165 PF00410 Ribosomal protein S8 BBDE_RS02170 PF00347 Ribosomal protein L6 BBDE_RS02175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BBDE_RS02180 PF03719 Ribosomal protein S5, C-terminal domain BBDE_RS02180 PF00333 Ribosomal protein S5, N-terminal domain BBDE_RS02185 PF00327 Ribosomal protein L30p/L7e BBDE_RS02190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BBDE_RS02195 PF00344 SecY translocase BBDE_RS02205 PF01176 Translation initiation factor 1A / IF-1 BBDE_RS02210 PF00444 Ribosomal protein L36 BBDE_RS02215 PF00416 Ribosomal protein S13/S18 BBDE_RS02220 PF00411 Ribosomal protein S11 BBDE_RS02225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BBDE_RS02225 PF01000 RNA polymerase Rpb3/RpoA insert domain BBDE_RS02225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BBDE_RS02230 PF01196 Ribosomal protein L17 BBDE_RS02235 PF01416 tRNA pseudouridine synthase BBDE_RS02240 PF14403 Circularly permuted ATP-grasp type 2 BBDE_RS02260 PF13184 NusA-like KH domain BBDE_RS02260 PF08529 NusA N-terminal domain BBDE_RS02265 PF11987 Translation-initiation factor 2 BBDE_RS02265 PF00009 Elongation factor Tu GTP binding domain BBDE_RS02265 PF04760 Translation initiation factor IF-2, N-terminal region BBDE_RS02270 PF02033 Ribosome-binding factor A BBDE_RS02275 PF09142 tRNA Pseudouridine synthase II, C terminal BBDE_RS02275 PF16198 tRNA pseudouridylate synthase B C-terminal domain BBDE_RS02275 PF01509 TruB family pseudouridylate synthase (N terminal domain) BBDE_RS02280 PF06574 FAD synthetase BBDE_RS02280 PF01687 Riboflavin kinase BBDE_RS02285 PF00005 ABC transporter BBDE_RS02290 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS02295 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBDE_RS02305 PF01979 Amidohydrolase family BBDE_RS02310 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BBDE_RS02310 PF05221 S-adenosyl-L-homocysteine hydrolase BBDE_RS02315 PF18073 Rubredoxin metal binding domain BBDE_RS02325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BBDE_RS02330 PF00075 RNase H BBDE_RS02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS02335 PF00989 PAS fold BBDE_RS02335 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BBDE_RS02335 PF17203 Single cache domain 3 BBDE_RS02345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBDE_RS02345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBDE_RS02345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBDE_RS02345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBDE_RS02350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBDE_RS02350 PF02378 Phosphotransferase system, EIIC BBDE_RS02350 PF00367 phosphotransferase system, EIIB BBDE_RS02355 PF00874 PRD domain BBDE_RS02355 PF03123 CAT RNA binding domain BBDE_RS02360 PF02142 MGS-like domain BBDE_RS02360 PF00781 Diacylglycerol kinase catalytic domain BBDE_RS02365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBDE_RS02365 PF02403 Seryl-tRNA synthetase N-terminal domain BBDE_RS02385 PF01547 Bacterial extracellular solute-binding protein BBDE_RS02390 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS02395 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS02400 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS02410 PF01636 Phosphotransferase enzyme family BBDE_RS02420 PF00202 Aminotransferase class-III BBDE_RS02430 PF00072 Response regulator receiver domain BBDE_RS02430 PF00196 Bacterial regulatory proteins, luxR family BBDE_RS02455 PF00005 ABC transporter BBDE_RS02460 PF04954 Siderophore-interacting protein BBDE_RS02460 PF08021 Siderophore-interacting FAD-binding domain BBDE_RS02460 PF00005 ABC transporter BBDE_RS02460 PF00664 ABC transporter transmembrane region BBDE_RS02465 PF07690 Major Facilitator Superfamily BBDE_RS02470 PF00072 Response regulator receiver domain BBDE_RS02470 PF04397 LytTr DNA-binding domain BBDE_RS02485 PF14310 Fibronectin type III-like domain BBDE_RS02485 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS02485 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS02495 PF01336 OB-fold nucleic acid binding domain BBDE_RS02495 PF00152 tRNA synthetases class II (D, K and N) BBDE_RS02505 PF01040 UbiA prenyltransferase family BBDE_RS02510 PF00300 Histidine phosphatase superfamily (branch 1) BBDE_RS02515 PF06100 MCRA family BBDE_RS02520 PF01895 PhoU domain BBDE_RS02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS02525 PF00512 His Kinase A (phospho-acceptor) domain BBDE_RS02535 PF01238 Phosphomannose isomerase type I BBDE_RS02540 PF00266 Aminotransferase class-V BBDE_RS02545 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BBDE_RS02545 PF05257 CHAP domain BBDE_RS02550 PF00877 NlpC/P60 family BBDE_RS02555 PF00582 Universal stress protein family BBDE_RS02560 PF02566 OsmC-like protein BBDE_RS02565 PF00303 Thymidylate synthase BBDE_RS02570 PF00186 Dihydrofolate reductase BBDE_RS02575 PF01451 Low molecular weight phosphotyrosine protein phosphatase BBDE_RS02595 PF16363 GDP-mannose 4,6 dehydratase BBDE_RS02600 PF02390 Putative methyltransferase BBDE_RS02640 PF00465 Iron-containing alcohol dehydrogenase BBDE_RS02645 PF00535 Glycosyl transferase family 2 BBDE_RS02645 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BBDE_RS02660 PF00005 ABC transporter BBDE_RS02660 PF13732 Domain of unknown function (DUF4162) BBDE_RS02670 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BBDE_RS02675 PF01171 PP-loop family BBDE_RS02675 PF09179 TilS substrate binding domain BBDE_RS02680 PF00156 Phosphoribosyl transferase domain BBDE_RS02685 PF17862 AAA+ lid domain BBDE_RS02685 PF01434 Peptidase family M41 BBDE_RS02685 PF00004 ATPase family associated with various cellular activities (AAA) BBDE_RS02690 PF01227 GTP cyclohydrolase I BBDE_RS02695 PF00809 Pterin binding enzyme BBDE_RS02700 PF02152 Dihydroneopterin aldolase BBDE_RS02715 PF12848 ABC transporter BBDE_RS02715 PF00005 ABC transporter BBDE_RS02725 PF01327 Polypeptide deformylase BBDE_RS02740 PF01053 Cys/Met metabolism PLP-dependent enzyme BBDE_RS02745 PF01261 Xylose isomerase-like TIM barrel BBDE_RS02750 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BBDE_RS02750 PF04616 Glycosyl hydrolases family 43 BBDE_RS02755 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS02760 PF01547 Bacterial extracellular solute-binding protein BBDE_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS02770 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS02775 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BBDE_RS02775 PF04616 Glycosyl hydrolases family 43 BBDE_RS02785 PF13407 Periplasmic binding protein domain BBDE_RS02790 PF00005 ABC transporter BBDE_RS02795 PF02653 Branched-chain amino acid transport system / permease component BBDE_RS02810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BBDE_RS02810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BBDE_RS02815 PF00480 ROK family BBDE_RS02930 PF00589 Phage integrase family BBDE_RS02930 PF02899 Phage integrase, N-terminal SAM-like domain BBDE_RS02940 PF01197 Ribosomal protein L31 BBDE_RS02945 PF03462 PCRF domain BBDE_RS02945 PF00472 RF-1 domain BBDE_RS02950 PF17827 PrmC N-terminal domain BBDE_RS02960 PF02653 Branched-chain amino acid transport system / permease component BBDE_RS02965 PF11862 Domain of unknown function (DUF3382) BBDE_RS02965 PF02653 Branched-chain amino acid transport system / permease component BBDE_RS02970 PF00005 ABC transporter BBDE_RS02970 PF12399 Branched-chain amino acid ATP-binding cassette transporter BBDE_RS02975 PF00005 ABC transporter BBDE_RS02980 PF01300 Telomere recombination BBDE_RS02985 PF00953 Glycosyl transferase family 4 BBDE_RS03010 PF12307 Protein of unknown function (DUF3631) BBDE_RS03030 PF00478 IMP dehydrogenase / GMP reductase domain BBDE_RS03030 PF00571 CBS domain BBDE_RS03040 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS03045 PF00128 Alpha amylase, catalytic domain BBDE_RS03055 PF00929 Exonuclease BBDE_RS03065 PF14493 Helix-turn-helix domain BBDE_RS03065 PF05970 PIF1-like helicase BBDE_RS03075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBDE_RS03075 PF03129 Anticodon binding domain BBDE_RS03075 PF04073 Aminoacyl-tRNA editing domain BBDE_RS03085 PF05649 Peptidase family M13 BBDE_RS03085 PF01431 Peptidase family M13 BBDE_RS03095 PF00557 Metallopeptidase family M24 BBDE_RS03100 PF00285 Citrate synthase, C-terminal domain BBDE_RS03105 PF02590 Predicted SPOUT methyltransferase BBDE_RS03110 PF14602 Hexapeptide repeat of succinyl-transferase BBDE_RS03110 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BBDE_RS03115 PF03462 PCRF domain BBDE_RS03115 PF00472 RF-1 domain BBDE_RS03120 PF00005 ABC transporter BBDE_RS03125 PF02687 FtsX-like permease family BBDE_RS03125 PF18075 FtsX extracellular domain BBDE_RS03130 PF01476 LysM domain BBDE_RS03130 PF05257 CHAP domain BBDE_RS03135 PF01668 SmpB protein BBDE_RS03145 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBDE_RS03155 PF00005 ABC transporter BBDE_RS03160 PF01380 SIS domain BBDE_RS03165 PF00849 RNA pseudouridylate synthase BBDE_RS03170 PF00375 Sodium:dicarboxylate symporter family BBDE_RS03175 PF13416 Bacterial extracellular solute-binding protein BBDE_RS03185 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS03190 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03195 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03200 PF08533 Beta-galactosidase C-terminal domain BBDE_RS03200 PF08532 Beta-galactosidase trimerisation domain BBDE_RS03200 PF02449 Beta-galactosidase BBDE_RS03205 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BBDE_RS03210 PF01547 Bacterial extracellular solute-binding protein BBDE_RS03220 PF03309 Type III pantothenate kinase BBDE_RS03225 PF02441 Flavoprotein BBDE_RS03225 PF04127 DNA / pantothenate metabolism flavoprotein BBDE_RS03230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBDE_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03245 PF00005 ABC transporter BBDE_RS03245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBDE_RS03250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBDE_RS03250 PF00005 ABC transporter BBDE_RS03260 PF00291 Pyridoxal-phosphate dependent enzyme BBDE_RS03260 PF00571 CBS domain BBDE_RS03270 PF09382 RQC domain BBDE_RS03270 PF16124 RecQ zinc-binding BBDE_RS03270 PF00570 HRDC domain BBDE_RS03270 PF00270 DEAD/DEAH box helicase BBDE_RS03270 PF00271 Helicase conserved C-terminal domain BBDE_RS03275 PF02664 S-Ribosylhomocysteinase (LuxS) BBDE_RS03285 PF13520 Amino acid permease BBDE_RS03290 PF00842 Alanine racemase, C-terminal domain BBDE_RS03290 PF01168 Alanine racemase, N-terminal domain BBDE_RS03295 PF13286 Phosphohydrolase-associated domain BBDE_RS03295 PF01966 HD domain BBDE_RS03300 PF08275 DNA primase catalytic core, N-terminal domain BBDE_RS03300 PF13662 Toprim domain BBDE_RS03300 PF08278 DNA primase DnaG DnaB-binding BBDE_RS03300 PF01807 CHC2 zinc finger BBDE_RS03300 PF10410 DnaB-helicase binding domain of primase BBDE_RS03325 PF00009 Elongation factor Tu GTP binding domain BBDE_RS03325 PF14492 Elongation Factor G, domain II BBDE_RS03325 PF03764 Elongation factor G, domain IV BBDE_RS03325 PF00679 Elongation factor G C-terminus BBDE_RS03350 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03355 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03360 PF00005 ABC transporter BBDE_RS03365 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBDE_RS03370 PF08546 Ketopantoate reductase PanE/ApbA C terminal BBDE_RS03370 PF02558 Ketopantoate reductase PanE/ApbA BBDE_RS03375 PF03180 NLPA lipoprotein BBDE_RS03380 PF00005 ABC transporter BBDE_RS03380 PF09383 NIL domain BBDE_RS03390 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03395 PF00155 Aminotransferase class I and II BBDE_RS03400 PF01053 Cys/Met metabolism PLP-dependent enzyme BBDE_RS03405 PF00005 ABC transporter BBDE_RS03410 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBDE_RS03415 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03420 PF00465 Iron-containing alcohol dehydrogenase BBDE_RS03425 PF09383 NIL domain BBDE_RS03425 PF00005 ABC transporter BBDE_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03435 PF03180 NLPA lipoprotein BBDE_RS03445 PF00465 Iron-containing alcohol dehydrogenase BBDE_RS03450 PF01145 SPFH domain / Band 7 family BBDE_RS03460 PF00005 ABC transporter BBDE_RS03460 PF12704 MacB-like periplasmic core domain BBDE_RS03460 PF02687 FtsX-like permease family BBDE_RS03470 PF02687 FtsX-like permease family BBDE_RS03470 PF12704 MacB-like periplasmic core domain BBDE_RS03475 PF02779 Transketolase, pyrimidine binding domain BBDE_RS03475 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BBDE_RS03475 PF02780 Transketolase, C-terminal domain BBDE_RS03485 PF00731 AIR carboxylase BBDE_RS03490 PF02222 ATP-grasp domain BBDE_RS03490 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BBDE_RS03495 PF01475 Ferric uptake regulator family BBDE_RS03505 PF02844 Phosphoribosylglycinamide synthetase, N domain BBDE_RS03505 PF02843 Phosphoribosylglycinamide synthetase, C domain BBDE_RS03505 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BBDE_RS03510 PF02769 AIR synthase related protein, C-terminal domain BBDE_RS03510 PF00586 AIR synthase related protein, N-terminal domain BBDE_RS03515 PF13537 Glutamine amidotransferase domain BBDE_RS03515 PF00156 Phosphoribosyl transferase domain BBDE_RS03520 PF11798 IMS family HHH motif BBDE_RS03520 PF00817 impB/mucB/samB family BBDE_RS03520 PF11799 impB/mucB/samB family C-terminal domain BBDE_RS03535 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BBDE_RS03535 PF02769 AIR synthase related protein, C-terminal domain BBDE_RS03535 PF00586 AIR synthase related protein, N-terminal domain BBDE_RS03540 PF01259 SAICAR synthetase BBDE_RS03545 PF02222 ATP-grasp domain BBDE_RS03565 PF01758 Sodium Bile acid symporter family BBDE_RS03570 PF00164 Ribosomal protein S12/S23 BBDE_RS03575 PF00177 Ribosomal protein S7p/S5e BBDE_RS03580 PF00679 Elongation factor G C-terminus BBDE_RS03580 PF14492 Elongation Factor G, domain II BBDE_RS03580 PF00009 Elongation factor Tu GTP binding domain BBDE_RS03580 PF03764 Elongation factor G, domain IV BBDE_RS03580 PF03144 Elongation factor Tu domain 2 BBDE_RS03585 PF00009 Elongation factor Tu GTP binding domain BBDE_RS03585 PF03143 Elongation factor Tu C-terminal domain BBDE_RS03585 PF03144 Elongation factor Tu domain 2 BBDE_RS03590 PF08207 Elongation factor P (EF-P) KOW-like domain BBDE_RS03590 PF09285 Elongation factor P, C-terminal BBDE_RS03590 PF01132 Elongation factor P (EF-P) OB domain BBDE_RS03595 PF01029 NusB family BBDE_RS03600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BBDE_RS03600 PF00117 Glutamine amidotransferase class-I BBDE_RS03605 PF02142 MGS-like domain BBDE_RS03605 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BBDE_RS03605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBDE_RS03610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BBDE_RS03615 PF00625 Guanylate kinase BBDE_RS03625 PF13276 HTH-like domain BBDE_RS03625 PF13333 Integrase core domain BBDE_RS03625 PF00665 Integrase core domain BBDE_RS03630 PF00920 Dehydratase family BBDE_RS03635 PF01192 RNA polymerase Rpb6 BBDE_RS03640 PF00438 S-adenosylmethionine synthetase, N-terminal domain BBDE_RS03640 PF02772 S-adenosylmethionine synthetase, central domain BBDE_RS03640 PF02773 S-adenosylmethionine synthetase, C-terminal domain BBDE_RS03645 PF17764 3′ DNA-binding domain (3′BD) BBDE_RS03655 PF00551 Formyl transferase BBDE_RS03655 PF02911 Formyl transferase, C-terminal domain BBDE_RS03665 PF17758 Proteasomal ATPase OB N-terminal domain BBDE_RS03665 PF16450 Proteasomal ATPase OB C-terminal domain BBDE_RS03665 PF00004 ATPase family associated with various cellular activities (AAA) BBDE_RS03670 PF03136 Pup-ligase protein BBDE_RS03675 PF00459 Inositol monophosphatase family BBDE_RS03680 PF05639 Pup-like protein BBDE_RS03685 PF03136 Pup-ligase protein BBDE_RS03700 PF00216 Bacterial DNA-binding protein BBDE_RS03710 PF00206 Lyase BBDE_RS03710 PF08328 Adenylosuccinate lyase C-terminal BBDE_RS03750 PF17863 AAA lid domain BBDE_RS03750 PF07726 ATPase family associated with various cellular activities (AAA) BBDE_RS03755 PF03167 Uracil DNA glycosylase superfamily BBDE_RS03765 PF00118 TCP-1/cpn60 chaperonin family BBDE_RS03780 PF00486 Transcriptional regulatory protein, C terminal BBDE_RS03780 PF00072 Response regulator receiver domain BBDE_RS03785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS03785 PF00672 HAMP domain BBDE_RS03785 PF00512 His Kinase A (phospho-acceptor) domain BBDE_RS03790 PF00313 'Cold-shock' DNA-binding domain BBDE_RS03800 PF00582 Universal stress protein family BBDE_RS03805 PF10431 C-terminal, D2-small domain, of ClpB protein BBDE_RS03805 PF02861 Clp amino terminal domain, pathogenicity island component BBDE_RS03805 PF00004 ATPase family associated with various cellular activities (AAA) BBDE_RS03805 PF07724 AAA domain (Cdc48 subfamily) BBDE_RS03805 PF17871 AAA lid domain BBDE_RS03815 PF03993 Domain of Unknown Function (DUF349) BBDE_RS03820 PF13393 Histidyl-tRNA synthetase BBDE_RS03820 PF03129 Anticodon binding domain BBDE_RS03825 PF02938 GAD domain BBDE_RS03825 PF00152 tRNA synthetases class II (D, K and N) BBDE_RS03825 PF01336 OB-fold nucleic acid binding domain BBDE_RS03830 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03835 PF00005 ABC transporter BBDE_RS03840 PF00005 ABC transporter BBDE_RS03845 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBDE_RS03850 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03855 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS03860 PF03976 Polyphosphate kinase 2 (PPK2) BBDE_RS03865 PF08148 DSHCT (NUC185) domain BBDE_RS03865 PF00271 Helicase conserved C-terminal domain BBDE_RS03865 PF00270 DEAD/DEAH box helicase BBDE_RS03870 PF00004 ATPase family associated with various cellular activities (AAA) BBDE_RS03870 PF12002 MgsA AAA+ ATPase C terminal BBDE_RS03870 PF16193 AAA C-terminal domain BBDE_RS03875 PF07690 Major Facilitator Superfamily BBDE_RS03880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBDE_RS03885 PF00574 Clp protease BBDE_RS03890 PF00574 Clp protease BBDE_RS03895 PF07724 AAA domain (Cdc48 subfamily) BBDE_RS03895 PF10431 C-terminal, D2-small domain, of ClpB protein BBDE_RS03895 PF06689 ClpX C4-type zinc finger BBDE_RS03910 PF06965 Na+/H+ antiporter 1 BBDE_RS03920 PF13085 2Fe-2S iron-sulfur cluster binding domain BBDE_RS03925 PF02910 Fumarate reductase flavoprotein C-term BBDE_RS03925 PF00890 FAD binding domain BBDE_RS03930 PF17782 DprA winged helix domain BBDE_RS03930 PF02481 DNA recombination-mediator protein A BBDE_RS03935 PF01078 Magnesium chelatase, subunit ChlI BBDE_RS03935 PF13335 Magnesium chelatase, subunit ChlI C-terminal BBDE_RS03940 PF02021 Uncharacterised protein family UPF0102 BBDE_RS03950 PF01053 Cys/Met metabolism PLP-dependent enzyme BBDE_RS03960 PF00005 ABC transporter BBDE_RS03965 PF02361 Cobalt transport protein BBDE_RS03975 PF00005 ABC transporter BBDE_RS03980 PF02687 FtsX-like permease family BBDE_RS03980 PF00005 ABC transporter BBDE_RS03980 PF12704 MacB-like periplasmic core domain BBDE_RS03985 PF00072 Response regulator receiver domain BBDE_RS03985 PF00196 Bacterial regulatory proteins, luxR family BBDE_RS03990 PF07730 Histidine kinase BBDE_RS03995 PF00561 alpha/beta hydrolase fold BBDE_RS04000 PF03807 NADP oxidoreductase coenzyme F420-dependent BBDE_RS04000 PF14748 Pyrroline-5-carboxylate reductase dimerisation BBDE_RS04005 PF06071 Protein of unknown function (DUF933) BBDE_RS04005 PF01926 50S ribosome-binding GTPase BBDE_RS04010 PF00392 Bacterial regulatory proteins, gntR family BBDE_RS04010 PF07702 UTRA domain BBDE_RS04030 PF03601 Conserved hypothetical protein 698 BBDE_RS04040 PF03466 LysR substrate binding domain BBDE_RS04040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBDE_RS04060 PF01925 Sulfite exporter TauE/SafE BBDE_RS04065 PF12833 Helix-turn-helix domain BBDE_RS04065 PF02311 AraC-like ligand binding domain BBDE_RS04075 PF00860 Permease family BBDE_RS04080 PF00106 short chain dehydrogenase BBDE_RS04085 PF00270 DEAD/DEAH box helicase BBDE_RS04085 PF00271 Helicase conserved C-terminal domain BBDE_RS04090 PF03649 Uncharacterised protein family (UPF0014) BBDE_RS04095 PF00005 ABC transporter BBDE_RS04095 PF00664 ABC transporter transmembrane region BBDE_RS04100 PF00756 Putative esterase BBDE_RS04105 PF09924 Uncharacterised conserved protein (DUF2156) BBDE_RS04110 PF03575 Peptidase family S51 BBDE_RS04115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BBDE_RS04115 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BBDE_RS04120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BBDE_RS04130 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BBDE_RS04130 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BBDE_RS04145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BBDE_RS04145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BBDE_RS04165 PF03466 LysR substrate binding domain BBDE_RS04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBDE_RS04170 PF12464 Maltose acetyltransferase BBDE_RS04170 PF14602 Hexapeptide repeat of succinyl-transferase BBDE_RS04170 PF00132 Bacterial transferase hexapeptide (six repeats) BBDE_RS04175 PF02525 Flavodoxin-like fold BBDE_RS04180 PF03591 AzlC protein BBDE_RS04185 PF05437 Branched-chain amino acid transport protein (AzlD) BBDE_RS04190 PF13722 5TM C-terminal transporter carbon starvation CstA BBDE_RS04190 PF02554 Carbon starvation protein CstA BBDE_RS04195 PF03699 Uncharacterised protein family (UPF0182) BBDE_RS04205 PF01195 Peptidyl-tRNA hydrolase BBDE_RS04210 PF17757 UvrB interaction domain BBDE_RS04210 PF02559 CarD-like/TRCF domain BBDE_RS04210 PF03461 TRCF domain BBDE_RS04210 PF00271 Helicase conserved C-terminal domain BBDE_RS04210 PF00270 DEAD/DEAH box helicase BBDE_RS04215 PF00113 Enolase, C-terminal TIM barrel domain BBDE_RS04215 PF03952 Enolase, N-terminal domain BBDE_RS04230 PF02541 Ppx/GppA phosphatase family BBDE_RS04245 PF03313 Serine dehydratase alpha chain BBDE_RS04245 PF03315 Serine dehydratase beta chain BBDE_RS04250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBDE_RS04255 PF01272 Transcription elongation factor, GreA/GreB, C-term BBDE_RS04255 PF03449 Transcription elongation factor, N-terminal BBDE_RS04260 PF03006 Haemolysin-III related BBDE_RS04265 PF07568 Histidine kinase BBDE_RS04265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS04265 PF12282 Signal transduction histidine kinase BBDE_RS04270 PF02467 Transcription factor WhiB BBDE_RS04275 PF01580 FtsK/SpoIIIE family BBDE_RS04275 PF12538 DNA transporter BBDE_RS04280 PF13399 LytR cell envelope-related transcriptional attenuator BBDE_RS04280 PF03816 Cell envelope-related transcriptional attenuator domain BBDE_RS04285 PF03816 Cell envelope-related transcriptional attenuator domain BBDE_RS04285 PF13399 LytR cell envelope-related transcriptional attenuator BBDE_RS04290 PF02467 Transcription factor WhiB BBDE_RS04315 PF00156 Phosphoribosyl transferase domain BBDE_RS04320 PF00512 His Kinase A (phospho-acceptor) domain BBDE_RS04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS04320 PF00672 HAMP domain BBDE_RS04325 PF00072 Response regulator receiver domain BBDE_RS04325 PF00486 Transcriptional regulatory protein, C terminal BBDE_RS04330 PF00128 Alpha amylase, catalytic domain BBDE_RS04330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBDE_RS04330 PF02806 Alpha amylase, C-terminal all-beta domain BBDE_RS04335 PF02559 CarD-like/TRCF domain BBDE_RS04340 PF02542 YgbB family BBDE_RS04345 PF00950 ABC 3 transport family BBDE_RS04350 PF00005 ABC transporter BBDE_RS04360 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BBDE_RS04360 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BBDE_RS04365 PF00575 S1 RNA binding domain BBDE_RS04370 PF01121 Dephospho-CoA kinase BBDE_RS04375 PF00271 Helicase conserved C-terminal domain BBDE_RS04375 PF17757 UvrB interaction domain BBDE_RS04375 PF12344 Ultra-violet resistance protein B BBDE_RS04375 PF02151 UvrB/uvrC motif BBDE_RS04375 PF04851 Type III restriction enzyme, res subunit BBDE_RS04380 PF03741 Integral membrane protein TerC family BBDE_RS04385 PF02887 Pyruvate kinase, alpha/beta domain BBDE_RS04385 PF00224 Pyruvate kinase, barrel domain BBDE_RS04390 PF00293 NUDIX domain BBDE_RS04450 PF02661 Fic/DOC family BBDE_RS04450 PF13784 Fic/DOC family N-terminal BBDE_RS04545 PF00929 Exonuclease BBDE_RS04550 PF00436 Single-strand binding protein family BBDE_RS04565 PF01443 Viral (Superfamily 1) RNA helicase BBDE_RS04565 PF17841 BID domain of Bartonella effector protein (Bep) BBDE_RS04565 PF03389 MobA/MobL family BBDE_RS04600 PF01051 Initiator Replication protein BBDE_RS04615 PF00232 Glycosyl hydrolase family 1 BBDE_RS04620 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS04625 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS04630 PF01547 Bacterial extracellular solute-binding protein BBDE_RS04635 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS04805 PF00072 Response regulator receiver domain BBDE_RS04805 PF03861 ANTAR domain BBDE_RS04810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BBDE_RS04810 PF00476 DNA polymerase family A BBDE_RS04810 PF01367 5'-3' exonuclease, C-terminal SAM fold BBDE_RS04815 PF01784 NIF3 (NGG1p interacting factor 3) BBDE_RS04820 PF00293 NUDIX domain BBDE_RS04825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBDE_RS04825 PF00128 Alpha amylase, catalytic domain BBDE_RS04840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBDE_RS04855 PF08271 TFIIB zinc-binding BBDE_RS04870 PF00072 Response regulator receiver domain BBDE_RS04870 PF00196 Bacterial regulatory proteins, luxR family BBDE_RS04885 PF00117 Glutamine amidotransferase class-I BBDE_RS04885 PF02540 NAD synthase BBDE_RS04885 PF00958 GMP synthase C terminal domain BBDE_RS04890 PF09364 XFP N-terminal domain BBDE_RS04890 PF09363 XFP C-terminal domain BBDE_RS04890 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BBDE_RS04895 PF07085 DRTGG domain BBDE_RS04895 PF01515 Phosphate acetyl/butaryl transferase BBDE_RS04900 PF00871 Acetokinase family BBDE_RS04905 PF01757 Acyltransferase family BBDE_RS04910 PF00860 Permease family BBDE_RS04915 PF00156 Phosphoribosyl transferase domain BBDE_RS04920 PF13361 UvrD-like helicase C-terminal domain BBDE_RS04920 PF00580 UvrD/REP helicase N-terminal domain BBDE_RS04920 PF13361 UvrD-like helicase C-terminal domain BBDE_RS04920 PF00580 UvrD/REP helicase N-terminal domain BBDE_RS04935 PF00005 ABC transporter BBDE_RS04940 PF01479 S4 domain BBDE_RS04940 PF00163 Ribosomal protein S4/S9 N-terminal domain BBDE_RS04950 PF00300 Histidine phosphatase superfamily (branch 1) BBDE_RS04965 PF02272 DHHA1 domain BBDE_RS04965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BBDE_RS04965 PF01411 tRNA synthetases class II (A) BBDE_RS04970 PF03652 Holliday junction resolvase BBDE_RS04985 PF01264 Chorismate synthase BBDE_RS04990 PF01761 3-dehydroquinate synthase BBDE_RS04990 PF01202 Shikimate kinase BBDE_RS04995 PF01220 Dehydroquinase class II BBDE_RS05000 PF00128 Alpha amylase, catalytic domain BBDE_RS05000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBDE_RS05000 PF17999 Pullulanase N1-terminal domain BBDE_RS05005 PF06418 CTP synthase N-terminus BBDE_RS05005 PF00117 Glutamine amidotransferase class-I BBDE_RS05010 PF01458 Uncharacterized protein family (UPF0051) BBDE_RS05015 PF01458 Uncharacterized protein family (UPF0051) BBDE_RS05020 PF00005 ABC transporter BBDE_RS05025 PF00266 Aminotransferase class-V BBDE_RS05035 PF01883 Iron-sulfur cluster assembly protein BBDE_RS05040 PF00483 Nucleotidyl transferase BBDE_RS05045 PF00588 SpoU rRNA Methylase family BBDE_RS05060 PF01230 HIT domain BBDE_RS05065 PF02562 PhoH-like protein BBDE_RS05070 PF02130 Uncharacterized protein family UPF0054 BBDE_RS05075 PF01595 Cyclin M transmembrane N-terminal domain BBDE_RS05075 PF03471 Transporter associated domain BBDE_RS05075 PF00571 CBS domain BBDE_RS05080 PF01926 50S ribosome-binding GTPase BBDE_RS05080 PF07650 KH domain BBDE_RS05085 PF00501 AMP-binding enzyme BBDE_RS05090 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BBDE_RS05090 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BBDE_RS05095 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BBDE_RS05100 PF02233 NAD(P) transhydrogenase beta subunit BBDE_RS05110 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS05110 PF17922 Tetracyclin repressor-like, C-terminal domain BBDE_RS05115 PF01055 Glycosyl hydrolases family 31 BBDE_RS05120 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS05125 PF01554 MatE BBDE_RS05130 PF00248 Aldo/keto reductase family BBDE_RS05140 PF02687 FtsX-like permease family BBDE_RS05140 PF12704 MacB-like periplasmic core domain BBDE_RS05140 PF00005 ABC transporter BBDE_RS05155 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BBDE_RS05160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BBDE_RS05165 PF17853 GGDEF-like domain BBDE_RS05165 PF13556 PucR C-terminal helix-turn-helix domain BBDE_RS05170 PF00202 Aminotransferase class-III BBDE_RS05180 PF00465 Iron-containing alcohol dehydrogenase BBDE_RS05200 PF01386 Ribosomal L25p family BBDE_RS05200 PF14693 Ribosomal protein TL5, C-terminal domain BBDE_RS05205 PF01063 Amino-transferase class IV BBDE_RS05210 PF03458 UPF0126 domain BBDE_RS05215 PF01649 Ribosomal protein S20 BBDE_RS05220 PF06421 GTP-binding protein LepA C-terminus BBDE_RS05220 PF00009 Elongation factor Tu GTP binding domain BBDE_RS05220 PF03144 Elongation factor Tu domain 2 BBDE_RS05220 PF00679 Elongation factor G C-terminus BBDE_RS05225 PF04055 Radical SAM superfamily BBDE_RS05230 PF01645 Conserved region in glutamate synthase BBDE_RS05230 PF04898 Glutamate synthase central domain BBDE_RS05230 PF00310 Glutamine amidotransferases class-II BBDE_RS05230 PF01493 GXGXG motif BBDE_RS05235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BBDE_RS05235 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBDE_RS05245 PF00534 Glycosyl transferases group 1 BBDE_RS05245 PF13439 Glycosyltransferase Family 4 BBDE_RS05250 PF00005 ABC transporter BBDE_RS05255 PF08704 tRNA methyltransferase complex GCD14 subunit BBDE_RS05265 PF08267 Cobalamin-independent synthase, N-terminal domain BBDE_RS05265 PF01717 Cobalamin-independent synthase, Catalytic domain BBDE_RS05270 PF02219 Methylenetetrahydrofolate reductase BBDE_RS05275 PF03710 Glutamate-ammonia ligase adenylyltransferase BBDE_RS05275 PF08335 GlnD PII-uridylyltransferase BBDE_RS05290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBDE_RS05290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBDE_RS05295 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BBDE_RS05295 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BBDE_RS05300 PF01979 Amidohydrolase family BBDE_RS05305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BBDE_RS05310 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BBDE_RS05315 PF01180 Dihydroorotate dehydrogenase BBDE_RS05320 PF00156 Phosphoribosyl transferase domain BBDE_RS05335 PF07722 Peptidase C26 BBDE_RS05345 PF12704 MacB-like periplasmic core domain BBDE_RS05345 PF02687 FtsX-like permease family BBDE_RS05345 PF00005 ABC transporter BBDE_RS05355 PF03853 YjeF-related protein N-terminus BBDE_RS05355 PF01256 Carbohydrate kinase BBDE_RS05360 PF12704 MacB-like periplasmic core domain BBDE_RS05360 PF02687 FtsX-like permease family BBDE_RS05360 PF00005 ABC transporter BBDE_RS05375 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BBDE_RS05385 PF00107 Zinc-binding dehydrogenase BBDE_RS05385 PF08240 Alcohol dehydrogenase GroES-like domain BBDE_RS05395 PF01717 Cobalamin-independent synthase, Catalytic domain BBDE_RS05410 PF12848 ABC transporter BBDE_RS05410 PF16326 ABC transporter C-terminal domain BBDE_RS05410 PF00005 ABC transporter BBDE_RS05415 PF00005 ABC transporter BBDE_RS05420 PF00857 Isochorismatase family BBDE_RS05430 PF12848 ABC transporter BBDE_RS05430 PF16326 ABC transporter C-terminal domain BBDE_RS05430 PF00005 ABC transporter BBDE_RS05435 PF00390 Malic enzyme, N-terminal domain BBDE_RS05435 PF03949 Malic enzyme, NAD binding domain BBDE_RS05490 PF17755 UvrA DNA-binding domain BBDE_RS05490 PF00005 ABC transporter BBDE_RS05490 PF17760 UvrA interaction domain BBDE_RS05495 PF02151 UvrB/uvrC motif BBDE_RS05495 PF01541 GIY-YIG catalytic domain BBDE_RS05495 PF08459 UvrC Helix-hairpin-helix N-terminal BBDE_RS05500 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BBDE_RS05500 PF08501 Shikimate dehydrogenase substrate binding domain BBDE_RS05505 PF03668 P-loop ATPase protein family BBDE_RS05510 PF10298 WhiA N-terminal LAGLIDADG-like domain BBDE_RS05510 PF02650 WhiA C-terminal HTH domain BBDE_RS05510 PF14527 WhiA LAGLIDADG-like domain BBDE_RS05515 PF00162 Phosphoglycerate kinase BBDE_RS05525 PF13333 Integrase core domain BBDE_RS05525 PF00665 Integrase core domain BBDE_RS05525 PF13276 HTH-like domain BBDE_RS05530 PF00121 Triosephosphate isomerase BBDE_RS05535 PF03840 Preprotein translocase SecG subunit BBDE_RS05545 PF00155 Aminotransferase class I and II BBDE_RS05550 PF00923 Transaldolase/Fructose-6-phosphate aldolase BBDE_RS05555 PF00456 Transketolase, thiamine diphosphate binding domain BBDE_RS05555 PF02780 Transketolase, C-terminal domain BBDE_RS05555 PF02779 Transketolase, pyrimidine binding domain BBDE_RS05560 PF01628 HrcA protein C terminal domain BBDE_RS05565 PF00226 DnaJ domain BBDE_RS05565 PF01556 DnaJ C terminal domain BBDE_RS05565 PF00684 DnaJ central domain BBDE_RS05575 PF02673 Bacitracin resistance protein BacA BBDE_RS05610 PF00498 FHA domain BBDE_RS05615 PF13411 MerR HTH family regulatory protein BBDE_RS05630 PF13397 RNA polymerase-binding protein BBDE_RS05635 PF00271 Helicase conserved C-terminal domain BBDE_RS05635 PF00270 DEAD/DEAH box helicase BBDE_RS05635 PF08148 DSHCT (NUC185) domain BBDE_RS05665 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BBDE_RS05665 PF01926 50S ribosome-binding GTPase BBDE_RS05670 PF01479 S4 domain BBDE_RS05670 PF00849 RNA pseudouridylate synthase BBDE_RS05675 PF00230 Major intrinsic protein BBDE_RS05680 PF02142 MGS-like domain BBDE_RS05680 PF01808 AICARFT/IMPCHase bienzyme BBDE_RS05690 PF00549 CoA-ligase BBDE_RS05690 PF02629 CoA binding domain BBDE_RS05695 PF00549 CoA-ligase BBDE_RS05695 PF08442 ATP-grasp domain BBDE_RS05700 PF00156 Phosphoribosyl transferase domain BBDE_RS05710 PF05496 Holliday junction DNA helicase RuvB P-loop domain BBDE_RS05710 PF05491 RuvB C-terminal winged helix domain BBDE_RS05710 PF17864 RuvB AAA lid domain BBDE_RS05715 PF01330 RuvA N terminal domain BBDE_RS05715 PF07499 RuvA, C-terminal domain BBDE_RS05720 PF02075 Crossover junction endodeoxyribonuclease RuvC BBDE_RS05725 PF01709 Transcriptional regulator BBDE_RS05730 PF13439 Glycosyltransferase Family 4 BBDE_RS05735 PF03279 Bacterial lipid A biosynthesis acyltransferase BBDE_RS05740 PF01066 CDP-alcohol phosphatidyltransferase BBDE_RS05745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBDE_RS05745 PF03129 Anticodon binding domain BBDE_RS05745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BBDE_RS05755 PF06947 Protein of unknown function (DUF1290) BBDE_RS05760 PF05949 Bacterial protein of unknown function (DUF881) BBDE_RS05765 PF01066 CDP-alcohol phosphatidyltransferase BBDE_RS05770 PF08029 HisG, C-terminal domain BBDE_RS05770 PF01634 ATP phosphoribosyltransferase BBDE_RS05775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BBDE_RS05780 PF00834 Ribulose-phosphate 3 epimerase family BBDE_RS05785 PF01790 Prolipoprotein diacylglyceryl transferase BBDE_RS05790 PF00290 Tryptophan synthase alpha chain BBDE_RS05795 PF00291 Pyridoxal-phosphate dependent enzyme BBDE_RS05800 PF00425 chorismate binding enzyme BBDE_RS05800 PF04715 Anthranilate synthase component I, N terminal region BBDE_RS05805 PF01502 Phosphoribosyl-AMP cyclohydrolase BBDE_RS05810 PF00977 Histidine biosynthesis protein BBDE_RS05815 PF04055 Radical SAM superfamily BBDE_RS05825 PF01765 Ribosome recycling factor BBDE_RS05830 PF00696 Amino acid kinase family BBDE_RS05835 PF00889 Elongation factor TS BBDE_RS05840 PF00318 Ribosomal protein S2 BBDE_RS05845 PF01327 Polypeptide deformylase BBDE_RS05850 PF00501 AMP-binding enzyme BBDE_RS05860 PF00478 IMP dehydrogenase / GMP reductase domain BBDE_RS05865 PF00180 Isocitrate/isopropylmalate dehydrogenase BBDE_RS05875 PF00501 AMP-binding enzyme BBDE_RS05895 PF00814 Glycoprotease family BBDE_RS05900 PF00583 Acetyltransferase (GNAT) family BBDE_RS05905 PF00814 Glycoprotease family BBDE_RS05910 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BBDE_RS05925 PF10531 SLBB domain BBDE_RS05930 PF09334 tRNA synthetases class I (M) BBDE_RS05930 PF13603 Leucyl-tRNA synthetase, Domain 2 BBDE_RS05930 PF08264 Anticodon-binding domain of tRNA BBDE_RS05940 PF01544 CorA-like Mg2+ transporter protein BBDE_RS05945 PF00300 Histidine phosphatase superfamily (branch 1) BBDE_RS05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS05965 PF07694 5TMR of 5TMR-LYT BBDE_RS05965 PF06580 Histidine kinase BBDE_RS05970 PF00072 Response regulator receiver domain BBDE_RS05970 PF04397 LytTr DNA-binding domain BBDE_RS05990 PF00300 Histidine phosphatase superfamily (branch 1) BBDE_RS06000 PF12804 MobA-like NTP transferase domain BBDE_RS06000 PF00132 Bacterial transferase hexapeptide (six repeats) BBDE_RS06055 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BBDE_RS06070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBDE_RS06070 PF14579 Helix-hairpin-helix motif BBDE_RS06070 PF00929 Exonuclease BBDE_RS06070 PF01336 OB-fold nucleic acid binding domain BBDE_RS06070 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBDE_RS06070 PF11490 DNA polymerase III polC-type N-terminus II BBDE_RS06070 PF02811 PHP domain BBDE_RS06090 PF09827 CRISPR associated protein Cas2 BBDE_RS06100 PF18470 Cas9 alpha-helical lobe domain BBDE_RS06100 PF17893 CRISPR-associated endonuclease Cas9 beta-hairpin domain BBDE_RS06100 PF18525 Cas9 C-terminal domain BBDE_RS06100 PF17894 Topo homolgy domain in CRISPR-associated endonuclease Cas9 BBDE_RS06100 PF01844 HNH endonuclease BBDE_RS06100 PF18541 RuvC endonuclease subdomain 3 BBDE_RS06120 PF00271 Helicase conserved C-terminal domain BBDE_RS06120 PF00176 SNF2 family N-terminal domain BBDE_RS06130 PF14572 Phosphoribosyl synthetase-associated domain BBDE_RS06130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BBDE_RS06135 PF01467 Cytidylyltransferase-like BBDE_RS06145 PF00171 Aldehyde dehydrogenase family BBDE_RS06150 PF00464 Serine hydroxymethyltransferase BBDE_RS06155 PF14821 Threonine synthase N terminus BBDE_RS06155 PF00291 Pyridoxal-phosphate dependent enzyme BBDE_RS06160 PF07690 Major Facilitator Superfamily BBDE_RS06165 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS06180 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS06200 PF00392 Bacterial regulatory proteins, gntR family BBDE_RS06205 PF13419 Haloacid dehalogenase-like hydrolase BBDE_RS06210 PF02463 RecF/RecN/SMC N terminal domain BBDE_RS06215 PF01513 ATP-NAD kinase BBDE_RS06220 PF02386 Cation transport protein BBDE_RS06225 PF02254 TrkA-N domain BBDE_RS06225 PF02080 TrkA-C domain BBDE_RS06230 PF01728 FtsJ-like methyltransferase BBDE_RS06230 PF01479 S4 domain BBDE_RS06250 PF01479 S4 domain BBDE_RS06250 PF00579 tRNA synthetases class I (W and Y) BBDE_RS06270 PF00206 Lyase BBDE_RS06270 PF14698 Argininosuccinate lyase C-terminal BBDE_RS06275 PF00764 Arginosuccinate synthase BBDE_RS06280 PF02863 Arginine repressor, C-terminal domain BBDE_RS06280 PF01316 Arginine repressor, DNA binding domain BBDE_RS06285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBDE_RS06285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBDE_RS06290 PF00202 Aminotransferase class-III BBDE_RS06295 PF00696 Amino acid kinase family BBDE_RS06300 PF01960 ArgJ family BBDE_RS06305 PF02774 Semialdehyde dehydrogenase, dimerisation domain BBDE_RS06305 PF01118 Semialdehyde dehydrogenase, NAD binding domain BBDE_RS06315 PF03483 B3/4 domain BBDE_RS06315 PF03484 tRNA synthetase B5 domain BBDE_RS06315 PF03147 Ferredoxin-fold anticodon binding domain BBDE_RS06315 PF01588 Putative tRNA binding domain BBDE_RS06315 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BBDE_RS06320 PF01409 tRNA synthetases class II core domain (F) BBDE_RS06320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BBDE_RS06325 PF08032 RNA 2'-O ribose methyltransferase substrate binding BBDE_RS06325 PF00588 SpoU rRNA Methylase family BBDE_RS06330 PF12704 MacB-like periplasmic core domain BBDE_RS06330 PF02687 FtsX-like permease family BBDE_RS06335 PF00005 ABC transporter BBDE_RS06350 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBDE_RS06350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBDE_RS06360 PF00120 Glutamine synthetase, catalytic domain BBDE_RS06360 PF03951 Glutamine synthetase, beta-Grasp domain BBDE_RS06400 PF00083 Sugar (and other) transporter BBDE_RS06430 PF03641 Possible lysine decarboxylase BBDE_RS06440 PF00005 ABC transporter BBDE_RS06450 PF10609 NUBPL iron-transfer P-loop NTPase BBDE_RS06450 PF01883 Iron-sulfur cluster assembly protein BBDE_RS06455 PF03120 NAD-dependent DNA ligase OB-fold domain BBDE_RS06455 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BBDE_RS06455 PF00533 BRCA1 C Terminus (BRCT) domain BBDE_RS06455 PF01653 NAD-dependent DNA ligase adenylation domain BBDE_RS06455 PF12826 Helix-hairpin-helix motif BBDE_RS06475 PF00005 ABC transporter BBDE_RS06480 PF00155 Aminotransferase class I and II BBDE_RS06485 PF00480 ROK family BBDE_RS06495 PF00005 ABC transporter BBDE_RS06495 PF02361 Cobalt transport protein BBDE_RS06500 PF01979 Amidohydrolase family BBDE_RS06510 PF03070 TENA/THI-4/PQQC family BBDE_RS06515 PF00271 Helicase conserved C-terminal domain BBDE_RS06515 PF00176 SNF2 family N-terminal domain BBDE_RS06515 PF04434 SWIM zinc finger BBDE_RS06520 PF03051 Peptidase C1-like family BBDE_RS06525 PF03819 MazG nucleotide pyrophosphohydrolase domain BBDE_RS06535 PF07885 Ion channel BBDE_RS06540 PF01554 MatE BBDE_RS06545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBDE_RS06550 PF04343 Protein of unknown function, DUF488 BBDE_RS06555 PF02580 D-Tyr-tRNA(Tyr) deacylase BBDE_RS06580 PF08240 Alcohol dehydrogenase GroES-like domain BBDE_RS06580 PF00107 Zinc-binding dehydrogenase BBDE_RS06595 PF02580 D-Tyr-tRNA(Tyr) deacylase BBDE_RS06600 PF00962 Adenosine/AMP deaminase BBDE_RS06605 PF01661 Macro domain BBDE_RS06610 PF00561 alpha/beta hydrolase fold BBDE_RS06615 PF00132 Bacterial transferase hexapeptide (six repeats) BBDE_RS06615 PF12464 Maltose acetyltransferase BBDE_RS06650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BBDE_RS06650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BBDE_RS06660 PF04851 Type III restriction enzyme, res subunit BBDE_RS06660 PF13307 Helicase C-terminal domain BBDE_RS06660 PF00929 Exonuclease BBDE_RS06665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBDE_RS06665 PF05698 Bacterial trigger factor protein (TF) C-terminus BBDE_RS06665 PF05697 Bacterial trigger factor protein (TF) BBDE_RS06680 PF04055 Radical SAM superfamily BBDE_RS06685 PF02901 Pyruvate formate lyase-like BBDE_RS06685 PF01228 Glycine radical BBDE_RS06690 PF02595 Glycerate kinase family BBDE_RS06695 PF02447 GntP family permease BBDE_RS06700 PF13556 PucR C-terminal helix-turn-helix domain BBDE_RS06700 PF17853 GGDEF-like domain BBDE_RS06700 PF05651 Putative sugar diacid recognition BBDE_RS06710 PF00795 Carbon-nitrogen hydrolase BBDE_RS06710 PF02540 NAD synthase BBDE_RS06715 PF07687 Peptidase dimerisation domain BBDE_RS06715 PF01546 Peptidase family M20/M25/M40 BBDE_RS06720 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS06725 PF09383 NIL domain BBDE_RS06725 PF00005 ABC transporter BBDE_RS06730 PF03180 NLPA lipoprotein BBDE_RS06770 PF13276 HTH-like domain BBDE_RS06770 PF00665 Integrase core domain BBDE_RS06775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BBDE_RS06780 PF13291 ACT domain BBDE_RS06780 PF04607 Region found in RelA / SpoT proteins BBDE_RS06780 PF02824 TGS domain BBDE_RS06785 PF00692 dUTPase BBDE_RS06805 PF00521 DNA gyrase/topoisomerase IV, subunit A BBDE_RS06805 PF03989 DNA gyrase C-terminal domain, beta-propeller BBDE_RS06810 PF08494 DEAD/H associated BBDE_RS06810 PF00270 DEAD/DEAH box helicase BBDE_RS06810 PF00271 Helicase conserved C-terminal domain BBDE_RS06815 PF13443 Cro/C1-type HTH DNA-binding domain BBDE_RS06835 PF01751 Toprim domain BBDE_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBDE_RS06835 PF00204 DNA gyrase B BBDE_RS06835 PF00986 DNA gyrase B subunit, carboxyl terminus BBDE_RS06840 PF04545 Sigma-70, region 4 BBDE_RS06840 PF04539 Sigma-70 region 3 BBDE_RS06840 PF04542 Sigma-70 region 2 BBDE_RS06840 PF00140 Sigma-70 factor, region 1.2 BBDE_RS06850 PF00348 Polyprenyl synthetase BBDE_RS06855 PF00069 Protein kinase domain BBDE_RS06855 PF03793 PASTA domain BBDE_RS06870 PF02885 Glycosyl transferase family, helical bundle domain BBDE_RS06870 PF00591 Glycosyl transferase family, a/b domain BBDE_RS06875 PF07516 SecA Wing and Scaffold domain BBDE_RS06875 PF02810 SEC-C motif BBDE_RS06875 PF01043 SecA preprotein cross-linking domain BBDE_RS06875 PF07517 SecA DEAD-like domain BBDE_RS06880 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BBDE_RS06880 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BBDE_RS06885 PF02631 RecX family BBDE_RS06890 PF00154 recA bacterial DNA recombination protein BBDE_RS06905 PF02464 Competence-damaged protein BBDE_RS06905 PF18146 Damage-inducible protein CinA KH domain BBDE_RS06905 PF00994 Probable molybdopterin binding domain BBDE_RS06910 PF01066 CDP-alcohol phosphatidyltransferase BBDE_RS06915 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BBDE_RS06915 PF17854 FtsK alpha domain BBDE_RS06915 PF01580 FtsK/SpoIIIE family BBDE_RS06915 PF09397 Ftsk gamma domain BBDE_RS06920 PF02156 Glycosyl hydrolase family 26 BBDE_RS06920 PF03425 Carbohydrate binding domain (family 11) BBDE_RS06935 PF00919 Uncharacterized protein family UPF0004 BBDE_RS06935 PF04055 Radical SAM superfamily BBDE_RS06940 PF04607 Region found in RelA / SpoT proteins BBDE_RS06950 PF01027 Inhibitor of apoptosis-promoting Bax1 BBDE_RS06960 PF00196 Bacterial regulatory proteins, luxR family BBDE_RS06960 PF00072 Response regulator receiver domain BBDE_RS06965 PF07730 Histidine kinase BBDE_RS06970 PF00005 ABC transporter BBDE_RS06985 PF12833 Helix-turn-helix domain BBDE_RS06985 PF12852 Cupin BBDE_RS06990 PF14602 Hexapeptide repeat of succinyl-transferase BBDE_RS06990 PF12464 Maltose acetyltransferase BBDE_RS06995 PF01554 MatE BBDE_RS07000 PF00694 Aconitase C-terminal domain BBDE_RS07000 PF00330 Aconitase family (aconitate hydratase) BBDE_RS07005 PF14659 Phage integrase, N-terminal SAM-like domain BBDE_RS07005 PF00589 Phage integrase family BBDE_RS07135 PF00145 C-5 cytosine-specific DNA methylase BBDE_RS07135 PF12728 Helix-turn-helix domain BBDE_RS07160 PF05958 tRNA (Uracil-5-)-methyltransferase BBDE_RS07175 PF03372 Endonuclease/Exonuclease/phosphatase family BBDE_RS07180 PF00005 ABC transporter BBDE_RS07180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBDE_RS07185 PF12911 N-terminal TM domain of oligopeptide transport permease C BBDE_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS07190 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS07195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBDE_RS07200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBDE_RS07205 PF02899 Phage integrase, N-terminal SAM-like domain BBDE_RS07205 PF00589 Phage integrase family BBDE_RS07210 PF12704 MacB-like periplasmic core domain BBDE_RS07210 PF02687 FtsX-like permease family BBDE_RS07210 PF00005 ABC transporter BBDE_RS07215 PF00005 ABC transporter BBDE_RS07215 PF12704 MacB-like periplasmic core domain BBDE_RS07215 PF02687 FtsX-like permease family BBDE_RS07225 PF02153 Prephenate dehydrogenase BBDE_RS07230 PF00800 Prephenate dehydratase BBDE_RS07230 PF01817 Chorismate mutase type II BBDE_RS07230 PF01842 ACT domain BBDE_RS07240 PF03144 Elongation factor Tu domain 2 BBDE_RS07240 PF14492 Elongation Factor G, domain II BBDE_RS07240 PF00679 Elongation factor G C-terminus BBDE_RS07240 PF00009 Elongation factor Tu GTP binding domain BBDE_RS07250 PF13333 Integrase core domain BBDE_RS07250 PF13276 HTH-like domain BBDE_RS07250 PF00665 Integrase core domain BBDE_RS07255 PF07690 Major Facilitator Superfamily BBDE_RS07265 PF13614 AAA domain BBDE_RS07270 PF02899 Phage integrase, N-terminal SAM-like domain BBDE_RS07270 PF00589 Phage integrase family BBDE_RS07275 PF00453 Ribosomal protein L20 BBDE_RS07280 PF01632 Ribosomal protein L35 BBDE_RS07285 PF05198 Translation initiation factor IF-3, N-terminal domain BBDE_RS07285 PF00707 Translation initiation factor IF-3, C-terminal domain BBDE_RS07290 PF13537 Glutamine amidotransferase domain BBDE_RS07290 PF00733 Asparagine synthase BBDE_RS07300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BBDE_RS07300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BBDE_RS07305 PF04073 Aminoacyl-tRNA editing domain BBDE_RS07310 PF02401 LytB protein BBDE_RS07325 PF08281 Sigma-70, region 4 BBDE_RS07325 PF04542 Sigma-70 region 2 BBDE_RS07330 PF08245 Mur ligase middle domain BBDE_RS07330 PF02875 Mur ligase family, glutamate ligase domain BBDE_RS07335 PF08245 Mur ligase middle domain BBDE_RS07335 PF02875 Mur ligase family, glutamate ligase domain BBDE_RS07345 PF01177 Asp/Glu/Hydantoin racemase BBDE_RS07350 PF02875 Mur ligase family, glutamate ligase domain BBDE_RS07350 PF08245 Mur ligase middle domain BBDE_RS07355 PF05195 Aminopeptidase P, N-terminal domain BBDE_RS07355 PF00557 Metallopeptidase family M24 BBDE_RS07360 PF00293 NUDIX domain BBDE_RS07365 PF00005 ABC transporter BBDE_RS07365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBDE_RS07370 PF12911 N-terminal TM domain of oligopeptide transport permease C BBDE_RS07370 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS07375 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS07380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBDE_RS07385 PF00480 ROK family BBDE_RS07385 PF01325 Iron dependent repressor, N-terminal DNA binding domain BBDE_RS07390 PF01467 Cytidylyltransferase-like BBDE_RS07390 PF00294 pfkB family carbohydrate kinase BBDE_RS07415 PF08245 Mur ligase middle domain BBDE_RS07415 PF02875 Mur ligase family, glutamate ligase domain BBDE_RS07415 PF01225 Mur ligase family, catalytic domain BBDE_RS07420 PF03033 Glycosyltransferase family 28 N-terminal domain BBDE_RS07420 PF04101 Glycosyltransferase family 28 C-terminal domain BBDE_RS07425 PF01098 Cell cycle protein BBDE_RS07430 PF08245 Mur ligase middle domain BBDE_RS07430 PF02875 Mur ligase family, glutamate ligase domain BBDE_RS07435 PF00953 Glycosyl transferase family 4 BBDE_RS07440 PF01225 Mur ligase family, catalytic domain BBDE_RS07440 PF02875 Mur ligase family, glutamate ligase domain BBDE_RS07440 PF08245 Mur ligase middle domain BBDE_RS07450 PF03717 Penicillin-binding Protein dimerisation domain BBDE_RS07450 PF00905 Penicillin binding protein transpeptidase domain BBDE_RS07460 PF01795 MraW methylase family BBDE_RS07465 PF02381 MraZ protein, putative antitoxin-like BBDE_RS07475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBDE_RS07475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBDE_RS07480 PF03477 ATP cone domain BBDE_RS07490 PF01726 LexA DNA binding domain BBDE_RS07490 PF00717 Peptidase S24-like BBDE_RS07495 PF01545 Cation efflux family BBDE_RS07500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BBDE_RS07500 PF00056 lactate/malate dehydrogenase, NAD binding domain BBDE_RS07505 PF16360 GTP-binding GTPase Middle Region BBDE_RS07505 PF13167 GTP-binding GTPase N-terminal BBDE_RS07505 PF01926 50S ribosome-binding GTPase BBDE_RS07510 PF05175 Methyltransferase small domain BBDE_RS07515 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BBDE_RS07515 PF00271 Helicase conserved C-terminal domain BBDE_RS07515 PF04408 Helicase associated domain (HA2) BBDE_RS07515 PF11898 Domain of unknown function (DUF3418) BBDE_RS07515 PF00270 DEAD/DEAH box helicase BBDE_RS07520 PF07690 Major Facilitator Superfamily BBDE_RS07530 PF03951 Glutamine synthetase, beta-Grasp domain BBDE_RS07530 PF00120 Glutamine synthetase, catalytic domain BBDE_RS07535 PF01580 FtsK/SpoIIIE family BBDE_RS07570 PF00082 Subtilase family BBDE_RS07595 PF00082 Subtilase family BBDE_RS07600 PF00977 Histidine biosynthesis protein BBDE_RS07605 PF00117 Glutamine amidotransferase class-I BBDE_RS07615 PF00475 Imidazoleglycerol-phosphate dehydratase BBDE_RS07620 PF00155 Aminotransferase class I and II BBDE_RS07625 PF00815 Histidinol dehydrogenase BBDE_RS07635 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBDE_RS07635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBDE_RS07635 PF14579 Helix-hairpin-helix motif BBDE_RS07635 PF02811 PHP domain BBDE_RS07645 PF00849 RNA pseudouridylate synthase BBDE_RS07650 PF01252 Signal peptidase (SPase) II BBDE_RS07665 PF04472 Cell division protein SepF BBDE_RS07670 PF12327 FtsZ family, C-terminal domain BBDE_RS07670 PF00091 Tubulin/FtsZ family, GTPase domain BBDE_RS07675 PF01207 Dihydrouridine synthase (Dus) BBDE_RS07680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBDE_RS07680 PF03129 Anticodon binding domain BBDE_RS07685 PF00248 Aldo/keto reductase family BBDE_RS07695 PF02110 Hydroxyethylthiazole kinase family BBDE_RS07700 PF01964 Radical SAM ThiC family BBDE_RS07700 PF13667 ThiC-associated domain BBDE_RS07700 PF02581 Thiamine monophosphate synthase BBDE_RS07705 PF08543 Phosphomethylpyrimidine kinase BBDE_RS07705 PF02581 Thiamine monophosphate synthase BBDE_RS07710 PF01910 Thiamine-binding protein BBDE_RS07715 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS07720 PF01306 LacY proton/sugar symporter BBDE_RS07725 PF08244 Glycosyl hydrolases family 32 C terminal BBDE_RS07725 PF00251 Glycosyl hydrolases family 32 N-terminal domain BBDE_RS07735 PF00072 Response regulator receiver domain BBDE_RS07735 PF00196 Bacterial regulatory proteins, luxR family BBDE_RS07745 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS07755 PF01156 Inosine-uridine preferring nucleoside hydrolase BBDE_RS07765 PF01255 Putative undecaprenyl diphosphate synthase BBDE_RS07770 PF11967 Recombination protein O N terminal BBDE_RS07770 PF02565 Recombination protein O C terminal BBDE_RS07780 PF04551 GcpE protein BBDE_RS07785 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BBDE_RS07785 PF13288 DXP reductoisomerase C-terminal domain BBDE_RS07785 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BBDE_RS07800 PF01638 HxlR-like helix-turn-helix BBDE_RS07810 PF11253 Protein of unknown function (DUF3052) BBDE_RS07815 PF05362 Lon protease (S16) C-terminal proteolytic domain BBDE_RS07815 PF13180 PDZ domain BBDE_RS07825 PF00580 UvrD/REP helicase N-terminal domain BBDE_RS07825 PF00570 HRDC domain BBDE_RS07825 PF13361 UvrD-like helicase C-terminal domain BBDE_RS07840 PF02811 PHP domain BBDE_RS07850 PF01678 Diaminopimelate epimerase BBDE_RS07855 PF01177 Asp/Glu/Hydantoin racemase BBDE_RS07865 PF02245 Methylpurine-DNA glycosylase (MPG) BBDE_RS07890 PF09827 CRISPR associated protein Cas2 BBDE_RS07895 PF01867 CRISPR associated protein Cas1 BBDE_RS07925 PF00133 tRNA synthetases class I (I, L, M and V) BBDE_RS07925 PF08264 Anticodon-binding domain of tRNA BBDE_RS07930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBDE_RS07935 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BBDE_RS07935 PF02837 Glycosyl hydrolases family 2, sugar binding domain BBDE_RS07935 PF16353 Domain of unknown function(DUF4981) BBDE_RS07935 PF00703 Glycosyl hydrolases family 2 BBDE_RS07935 PF02929 Beta galactosidase small chain BBDE_RS07940 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS07945 PF07690 Major Facilitator Superfamily BBDE_RS07950 PF12833 Helix-turn-helix domain BBDE_RS07950 PF02311 AraC-like ligand binding domain BBDE_RS07960 PF00005 ABC transporter BBDE_RS07960 PF00664 ABC transporter transmembrane region BBDE_RS07970 PF14602 Hexapeptide repeat of succinyl-transferase BBDE_RS07970 PF12464 Maltose acetyltransferase BBDE_RS07975 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS07975 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS07975 PF14310 Fibronectin type III-like domain BBDE_RS07985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BBDE_RS07985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BBDE_RS07995 PF07690 Major Facilitator Superfamily BBDE_RS08005 PF07739 TipAS antibiotic-recognition domain BBDE_RS08005 PF13411 MerR HTH family regulatory protein BBDE_RS08015 PF07690 Major Facilitator Superfamily BBDE_RS08035 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS08045 PF14310 Fibronectin type III-like domain BBDE_RS08045 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS08045 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS08050 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS08060 PF04397 LytTr DNA-binding domain BBDE_RS08060 PF00072 Response regulator receiver domain BBDE_RS08065 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS08065 PF14310 Fibronectin type III-like domain BBDE_RS08065 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS08070 PF04616 Glycosyl hydrolases family 43 BBDE_RS08070 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BBDE_RS08100 PF02449 Beta-galactosidase BBDE_RS08100 PF08532 Beta-galactosidase trimerisation domain BBDE_RS08100 PF08533 Beta-galactosidase C-terminal domain BBDE_RS08105 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS08110 PF00248 Aldo/keto reductase family BBDE_RS08120 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS08130 PF02447 GntP family permease BBDE_RS08150 PF13597 Anaerobic ribonucleoside-triphosphate reductase BBDE_RS08150 PF03477 ATP cone domain BBDE_RS08155 PF13742 OB-fold nucleic acid binding domain BBDE_RS08155 PF02601 Exonuclease VII, large subunit BBDE_RS08160 PF02609 Exonuclease VII small subunit BBDE_RS08175 PF05368 NmrA-like family BBDE_RS08180 PF07532 Bacterial Ig-like domain (group 4) BBDE_RS08185 PF07944 Beta-L-arabinofuranosidase, GH127 BBDE_RS08190 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS08195 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS08200 PF13416 Bacterial extracellular solute-binding protein BBDE_RS08205 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS08230 PF07690 Major Facilitator Superfamily BBDE_RS08240 PF02541 Ppx/GppA phosphatase family BBDE_RS08245 PF00155 Aminotransferase class I and II BBDE_RS08250 PF03852 DNA mismatch endonuclease Vsr BBDE_RS08255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BBDE_RS08255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BBDE_RS08260 PF00293 NUDIX domain BBDE_RS08285 PF07691 PA14 domain BBDE_RS08285 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS08285 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS08285 PF14310 Fibronectin type III-like domain BBDE_RS08295 PF14310 Fibronectin type III-like domain BBDE_RS08295 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS08295 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS08365 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BBDE_RS08425 PF00282 Pyridoxal-dependent decarboxylase conserved domain BBDE_RS08430 PF13520 Amino acid permease BBDE_RS08435 PF01327 Polypeptide deformylase BBDE_RS08440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBDE_RS08440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBDE_RS08440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBDE_RS08440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBDE_RS08445 PF11838 ERAP1-like C-terminal domain BBDE_RS08445 PF01433 Peptidase family M1 domain BBDE_RS08450 PF12706 Beta-lactamase superfamily domain BBDE_RS08450 PF17770 Ribonuclease J C-terminal domain BBDE_RS08450 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BBDE_RS08455 PF00701 Dihydrodipicolinate synthetase family BBDE_RS08460 PF07690 Major Facilitator Superfamily BBDE_RS08465 PF04945 YHS domain BBDE_RS08470 PF02583 Metal-sensitive transcriptional repressor BBDE_RS08480 PF01113 Dihydrodipicolinate reductase, N-terminus BBDE_RS08480 PF05173 Dihydrodipicolinate reductase, C-terminus BBDE_RS08495 PF13361 UvrD-like helicase C-terminal domain BBDE_RS08495 PF00580 UvrD/REP helicase N-terminal domain BBDE_RS08520 PF13191 AAA ATPase domain BBDE_RS08520 PF00069 Protein kinase domain BBDE_RS08530 PF17863 AAA lid domain BBDE_RS08530 PF07726 ATPase family associated with various cellular activities (AAA) BBDE_RS08565 PF05000 RNA polymerase Rpb1, domain 4 BBDE_RS08565 PF00623 RNA polymerase Rpb1, domain 2 BBDE_RS08565 PF04997 RNA polymerase Rpb1, domain 1 BBDE_RS08565 PF04998 RNA polymerase Rpb1, domain 5 BBDE_RS08565 PF04983 RNA polymerase Rpb1, domain 3 BBDE_RS08570 PF04561 RNA polymerase Rpb2, domain 2 BBDE_RS08570 PF00562 RNA polymerase Rpb2, domain 6 BBDE_RS08570 PF04563 RNA polymerase beta subunit BBDE_RS08570 PF04565 RNA polymerase Rpb2, domain 3 BBDE_RS08570 PF10385 RNA polymerase beta subunit external 1 domain BBDE_RS08570 PF04560 RNA polymerase Rpb2, domain 7 BBDE_RS08580 PF00730 HhH-GPD superfamily base excision DNA repair protein BBDE_RS08580 PF00633 Helix-hairpin-helix motif BBDE_RS08580 PF10576 Iron-sulfur binding domain of endonuclease III BBDE_RS08585 PF00588 SpoU rRNA Methylase family BBDE_RS08590 PF05167 Uncharacterised ACR (DUF711) BBDE_RS08600 PF07690 Major Facilitator Superfamily BBDE_RS08610 PF00834 Ribulose-phosphate 3 epimerase family BBDE_RS08615 PF00480 ROK family BBDE_RS08625 PF08544 GHMP kinases C terminal BBDE_RS08625 PF00288 GHMP kinases N terminal domain BBDE_RS08625 PF10509 Galactokinase galactose-binding signature BBDE_RS08630 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BBDE_RS08630 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BBDE_RS08635 PF00455 DeoR C terminal sensor domain BBDE_RS08635 PF08220 DeoR-like helix-turn-helix domain BBDE_RS08640 PF00535 Glycosyl transferase family 2 BBDE_RS08650 PF01180 Dihydroorotate dehydrogenase BBDE_RS08655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BBDE_RS08660 PF00912 Transglycosylase BBDE_RS08660 PF00905 Penicillin binding protein transpeptidase domain BBDE_RS08665 PF13545 Crp-like helix-turn-helix domain BBDE_RS08665 PF00027 Cyclic nucleotide-binding domain BBDE_RS08670 PF10437 Bacterial lipoate protein ligase C-terminus BBDE_RS08670 PF03099 Biotin/lipoate A/B protein ligase family BBDE_RS08680 PF00180 Isocitrate/isopropylmalate dehydrogenase BBDE_RS08685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BBDE_RS08685 PF00326 Prolyl oligopeptidase family BBDE_RS08695 PF01597 Glycine cleavage H-protein BBDE_RS08700 PF17969 L,D-transpeptidase C-terminal domain BBDE_RS08700 PF03734 L,D-transpeptidase catalytic domain BBDE_RS08705 PF00293 NUDIX domain BBDE_RS08705 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BBDE_RS08705 PF09297 NADH pyrophosphatase zinc ribbon domain BBDE_RS08710 PF00561 alpha/beta hydrolase fold BBDE_RS08710 PF00106 short chain dehydrogenase BBDE_RS08720 PF00085 Thioredoxin BBDE_RS08730 PF01451 Low molecular weight phosphotyrosine protein phosphatase BBDE_RS08745 PF13439 Glycosyltransferase Family 4 BBDE_RS08745 PF00534 Glycosyl transferases group 1 BBDE_RS08755 PF00535 Glycosyl transferase family 2 BBDE_RS08765 PF01501 Glycosyl transferase family 8 BBDE_RS08765 PF00535 Glycosyl transferase family 2 BBDE_RS08770 PF00535 Glycosyl transferase family 2 BBDE_RS08810 PF00535 Glycosyl transferase family 2 BBDE_RS08810 PF01501 Glycosyl transferase family 8 BBDE_RS08825 PF01501 Glycosyl transferase family 8 BBDE_RS08825 PF00535 Glycosyl transferase family 2 BBDE_RS08840 PF00535 Glycosyl transferase family 2 BBDE_RS08840 PF01501 Glycosyl transferase family 8 BBDE_RS08855 PF00535 Glycosyl transferase family 2 BBDE_RS08855 PF01501 Glycosyl transferase family 8 BBDE_RS08860 PF00535 Glycosyl transferase family 2 BBDE_RS08860 PF01501 Glycosyl transferase family 8 BBDE_RS08865 PF13439 Glycosyltransferase Family 4 BBDE_RS08865 PF00534 Glycosyl transferases group 1 BBDE_RS08870 PF00534 Glycosyl transferases group 1 BBDE_RS08870 PF13439 Glycosyltransferase Family 4 BBDE_RS08880 PF00535 Glycosyl transferase family 2 BBDE_RS08885 PF00535 Glycosyl transferase family 2 BBDE_RS08885 PF01501 Glycosyl transferase family 8 BBDE_RS08890 PF00534 Glycosyl transferases group 1 BBDE_RS08900 PF00534 Glycosyl transferases group 1 BBDE_RS08900 PF13439 Glycosyltransferase Family 4 BBDE_RS08910 PF13614 AAA domain BBDE_RS08920 PF02397 Bacterial sugar transferase BBDE_RS08930 PF13614 AAA domain BBDE_RS08935 PF00483 Nucleotidyl transferase BBDE_RS08940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BBDE_RS08945 PF16363 GDP-mannose 4,6 dehydratase BBDE_RS08980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBDE_RS09020 PF01297 Zinc-uptake complex component A periplasmic BBDE_RS09020 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BBDE_RS09030 PF00253 Ribosomal protein S14p/S29e BBDE_RS09035 PF00471 Ribosomal protein L33 BBDE_RS09040 PF00830 Ribosomal L28 family BBDE_RS09065 PF00005 ABC transporter BBDE_RS09070 PF12704 MacB-like periplasmic core domain BBDE_RS09070 PF02687 FtsX-like permease family BBDE_RS09075 PF12704 MacB-like periplasmic core domain BBDE_RS09075 PF02687 FtsX-like permease family BBDE_RS09095 PF01451 Low molecular weight phosphotyrosine protein phosphatase BBDE_RS09105 PF07690 Major Facilitator Superfamily BBDE_RS09110 PF03358 NADPH-dependent FMN reductase BBDE_RS09110 PF01566 Natural resistance-associated macrophage protein BBDE_RS09120 PF00248 Aldo/keto reductase family BBDE_RS09135 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS09140 PF08532 Beta-galactosidase trimerisation domain BBDE_RS09140 PF02449 Beta-galactosidase BBDE_RS09145 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS09150 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS09160 PF01174 SNO glutamine amidotransferase family BBDE_RS09165 PF01680 SOR/SNZ family BBDE_RS09170 PF00664 ABC transporter transmembrane region BBDE_RS09170 PF00005 ABC transporter BBDE_RS09175 PF00501 AMP-binding enzyme BBDE_RS09180 PF07690 Major Facilitator Superfamily BBDE_RS09185 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS09190 PF01156 Inosine-uridine preferring nucleoside hydrolase BBDE_RS09195 PF11762 L-arabinose isomerase C-terminal domain BBDE_RS09195 PF02610 L-arabinose isomerase BBDE_RS09200 PF00596 Class II Aldolase and Adducin N-terminal domain BBDE_RS09210 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS09215 PF02545 Maf-like protein BBDE_RS09215 PF00293 NUDIX domain BBDE_RS09220 PF00288 GHMP kinases N terminal domain BBDE_RS09225 PF03447 Homoserine dehydrogenase, NAD binding domain BBDE_RS09225 PF01842 ACT domain BBDE_RS09225 PF00742 Homoserine dehydrogenase BBDE_RS09230 PF02378 Phosphotransferase system, EIIC BBDE_RS09230 PF00367 phosphotransferase system, EIIB BBDE_RS09230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BBDE_RS09235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BBDE_RS09235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BBDE_RS09240 PF00750 tRNA synthetases class I (R) BBDE_RS09240 PF05746 DALR anticodon binding domain BBDE_RS09240 PF03485 Arginyl tRNA synthetase N terminal domain BBDE_RS09245 PF00324 Amino acid permease BBDE_RS09250 PF01042 Endoribonuclease L-PSP BBDE_RS09285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBDE_RS09285 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BBDE_RS09295 PF13276 HTH-like domain BBDE_RS09295 PF13333 Integrase core domain BBDE_RS09295 PF00665 Integrase core domain BBDE_RS09305 PF00005 ABC transporter BBDE_RS09335 PF01939 Endonuclease NucS BBDE_RS09340 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BBDE_RS09345 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBDE_RS09345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBDE_RS09350 PF00231 ATP synthase BBDE_RS09355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBDE_RS09355 PF00306 ATP synthase alpha/beta chain, C terminal domain BBDE_RS09355 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBDE_RS09360 PF00213 ATP synthase delta (OSCP) subunit BBDE_RS09365 PF00430 ATP synthase B/B' CF(0) BBDE_RS09370 PF00137 ATP synthase subunit C BBDE_RS09375 PF00119 ATP synthase A chain BBDE_RS09380 PF04204 Homoserine O-succinyltransferase BBDE_RS09390 PF02515 CoA-transferase family III BBDE_RS09395 PF03547 Membrane transport protein BBDE_RS09400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBDE_RS09400 PF00205 Thiamine pyrophosphate enzyme, central domain BBDE_RS09400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBDE_RS09410 PF00128 Alpha amylase, catalytic domain BBDE_RS09410 PF11896 Domain of unknown function (DUF3416) BBDE_RS09415 PF00719 Inorganic pyrophosphatase BBDE_RS09420 PF02659 Putative manganese efflux pump BBDE_RS09430 PF00486 Transcriptional regulatory protein, C terminal BBDE_RS09435 PF10576 Iron-sulfur binding domain of endonuclease III BBDE_RS09435 PF00730 HhH-GPD superfamily base excision DNA repair protein BBDE_RS09440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBDE_RS09445 PF00133 tRNA synthetases class I (I, L, M and V) BBDE_RS09445 PF08264 Anticodon-binding domain of tRNA BBDE_RS09455 PF02153 Prephenate dehydrogenase BBDE_RS09455 PF01817 Chorismate mutase type II BBDE_RS09460 PF01037 Lrp/AsnC ligand binding domain BBDE_RS09465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBDE_RS09465 PF07497 Rho termination factor, RNA-binding domain BBDE_RS09465 PF07498 Rho termination factor, N-terminal domain BBDE_RS09470 PF01593 Flavin containing amine oxidoreductase BBDE_RS09480 PF10611 Protein of unknown function (DUF2469) BBDE_RS09490 PF02934 GatB/GatE catalytic domain BBDE_RS09490 PF02637 GatB domain BBDE_RS09495 PF01425 Amidase BBDE_RS09500 PF02686 Glu-tRNAGln amidotransferase C subunit BBDE_RS09520 PF02646 RmuC family BBDE_RS09525 PF00403 Heavy-metal-associated domain BBDE_RS09530 PF17871 AAA lid domain BBDE_RS09530 PF02861 Clp amino terminal domain, pathogenicity island component BBDE_RS09530 PF07724 AAA domain (Cdc48 subfamily) BBDE_RS09530 PF00004 ATPase family associated with various cellular activities (AAA) BBDE_RS09530 PF10431 C-terminal, D2-small domain, of ClpB protein BBDE_RS09535 PF01557 Fumarylacetoacetate (FAA) hydrolase family BBDE_RS09555 PF04203 Sortase domain BBDE_RS09560 PF01168 Alanine racemase, N-terminal domain BBDE_RS09570 PF00749 tRNA synthetases class I (E and Q), catalytic domain BBDE_RS09580 PF00230 Major intrinsic protein BBDE_RS09585 PF08341 Thioester domain BBDE_RS09585 PF17802 Prealbumin-like fold domain BBDE_RS09590 PF00005 ABC transporter BBDE_RS09620 PF00005 ABC transporter BBDE_RS09625 PF00072 Response regulator receiver domain BBDE_RS09625 PF00196 Bacterial regulatory proteins, luxR family BBDE_RS09640 PF03948 Ribosomal protein L9, C-terminal domain BBDE_RS09640 PF01281 Ribosomal protein L9, N-terminal domain BBDE_RS09645 PF01084 Ribosomal protein S18 BBDE_RS09650 PF00436 Single-strand binding protein family BBDE_RS09655 PF01250 Ribosomal protein S6 BBDE_RS09660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BBDE_RS09660 PF14572 Phosphoribosyl synthetase-associated domain BBDE_RS09665 PF00294 pfkB family carbohydrate kinase BBDE_RS09670 PF07690 Major Facilitator Superfamily BBDE_RS09675 PF01156 Inosine-uridine preferring nucleoside hydrolase BBDE_RS09680 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS09690 PF00884 Sulfatase BBDE_RS09700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BBDE_RS09700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BBDE_RS09700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BBDE_RS09705 PF00535 Glycosyl transferase family 2 BBDE_RS09715 PF14307 Glycosyltransferase WbsX BBDE_RS09715 PF05045 Rhamnan synthesis protein F BBDE_RS09720 PF00535 Glycosyl transferase family 2 BBDE_RS09730 PF02397 Bacterial sugar transferase BBDE_RS09740 PF00535 Glycosyl transferase family 2 BBDE_RS09750 PF17994 Galactofuranosyltransferase 2 N-terminal BBDE_RS09755 PF13784 Fic/DOC family N-terminal BBDE_RS09755 PF02661 Fic/DOC family BBDE_RS09770 PF00005 ABC transporter BBDE_RS09785 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BBDE_RS09795 PF17994 Galactofuranosyltransferase 2 N-terminal BBDE_RS09800 PF07745 Glycosyl hydrolase family 53 BBDE_RS09805 PF01757 Acyltransferase family BBDE_RS09820 PF00535 Glycosyl transferase family 2 BBDE_RS09835 PF01183 Glycosyl hydrolases family 25 BBDE_RS09855 PF03773 Predicted permease BBDE_RS09870 PF02653 Branched-chain amino acid transport system / permease component BBDE_RS09875 PF00005 ABC transporter BBDE_RS09880 PF13407 Periplasmic binding protein domain BBDE_RS09885 PF00480 ROK family BBDE_RS09890 PF00005 ABC transporter BBDE_RS09895 PF01979 Amidohydrolase family BBDE_RS09905 PF04545 Sigma-70, region 4 BBDE_RS09905 PF04539 Sigma-70 region 3 BBDE_RS09905 PF04542 Sigma-70 region 2 BBDE_RS09905 PF00140 Sigma-70 factor, region 1.2 BBDE_RS09945 PF02687 FtsX-like permease family BBDE_RS09945 PF12704 MacB-like periplasmic core domain BBDE_RS09945 PF00005 ABC transporter BBDE_RS09960 PF02705 K+ potassium transporter BBDE_RS09965 PF01026 TatD related DNase BBDE_RS09975 PF02018 Carbohydrate binding domain BBDE_RS09975 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BBDE_RS09985 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS09995 PF13407 Periplasmic binding protein domain BBDE_RS10000 PF02653 Branched-chain amino acid transport system / permease component BBDE_RS10005 PF00005 ABC transporter BBDE_RS10010 PF03702 Anhydro-N-acetylmuramic acid kinase BBDE_RS10030 PF07944 Beta-L-arabinofuranosidase, GH127 BBDE_RS10050 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10055 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10070 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS10075 PF00703 Glycosyl hydrolases family 2 BBDE_RS10075 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BBDE_RS10075 PF02837 Glycosyl hydrolases family 2, sugar binding domain BBDE_RS10080 PF00005 ABC transporter BBDE_RS10080 PF00664 ABC transporter transmembrane region BBDE_RS10085 PF00005 ABC transporter BBDE_RS10085 PF00664 ABC transporter transmembrane region BBDE_RS10095 PF00083 Sugar (and other) transporter BBDE_RS10105 PF08264 Anticodon-binding domain of tRNA BBDE_RS10105 PF09334 tRNA synthetases class I (M) BBDE_RS10120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BBDE_RS10125 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BBDE_RS10125 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase BBDE_RS10130 PF03425 Carbohydrate binding domain (family 11) BBDE_RS10130 PF02156 Glycosyl hydrolase family 26 BBDE_RS10135 PF06165 Glycosyltransferase family 36 BBDE_RS10135 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BBDE_RS10140 PF00331 Glycosyl hydrolase family 10 BBDE_RS10140 PF07859 alpha/beta hydrolase fold BBDE_RS10150 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BBDE_RS10150 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS10155 PF13305 Tetracyclin repressor-like, C-terminal domain BBDE_RS10155 PF00440 Bacterial regulatory proteins, tetR family BBDE_RS10160 PF00171 Aldehyde dehydrogenase family BBDE_RS10165 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10170 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10175 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10180 PF13416 Bacterial extracellular solute-binding protein BBDE_RS10185 PF08402 TOBE domain BBDE_RS10185 PF00005 ABC transporter BBDE_RS10190 PF07729 FCD domain BBDE_RS10190 PF00392 Bacterial regulatory proteins, gntR family BBDE_RS10200 PF00465 Iron-containing alcohol dehydrogenase BBDE_RS10205 PF00202 Aminotransferase class-III BBDE_RS10215 PF00480 ROK family BBDE_RS10220 PF08532 Beta-galactosidase trimerisation domain BBDE_RS10220 PF02449 Beta-galactosidase BBDE_RS10220 PF08533 Beta-galactosidase C-terminal domain BBDE_RS10225 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BBDE_RS10225 PF04616 Glycosyl hydrolases family 43 BBDE_RS10230 PF00150 Cellulase (glycosyl hydrolase family 5) BBDE_RS10235 PF00150 Cellulase (glycosyl hydrolase family 5) BBDE_RS10235 PF18448 Carbohydrate binding domain BBDE_RS10235 PF03442 Carbohydrate binding domain X2 BBDE_RS10240 PF01055 Glycosyl hydrolases family 31 BBDE_RS10240 PF13802 Galactose mutarotase-like BBDE_RS10245 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS10245 PF14310 Fibronectin type III-like domain BBDE_RS10245 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS10255 PF13472 GDSL-like Lipase/Acylhydrolase family BBDE_RS10265 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10270 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10280 PF13802 Galactose mutarotase-like BBDE_RS10280 PF01055 Glycosyl hydrolases family 31 BBDE_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10290 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10295 PF01547 Bacterial extracellular solute-binding protein BBDE_RS10300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BBDE_RS10300 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS10310 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10320 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS10325 PF09335 SNARE associated Golgi protein BBDE_RS10335 PF13635 Domain of unknown function (DUF4143) BBDE_RS10335 PF13173 AAA domain BBDE_RS10340 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS10345 PF00251 Glycosyl hydrolases family 32 N-terminal domain BBDE_RS10345 PF08244 Glycosyl hydrolases family 32 C terminal BBDE_RS10355 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10360 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10365 PF01547 Bacterial extracellular solute-binding protein BBDE_RS10370 PF13419 Haloacid dehalogenase-like hydrolase BBDE_RS10380 PF13411 MerR HTH family regulatory protein BBDE_RS10385 PF01556 DnaJ C terminal domain BBDE_RS10385 PF00226 DnaJ domain BBDE_RS10390 PF01025 GrpE BBDE_RS10395 PF00012 Hsp70 protein BBDE_RS10400 PF00245 Alkaline phosphatase BBDE_RS10405 PF17137 Domain of unknown function (DUF5110) BBDE_RS10405 PF16338 Domain of unknown function (DUF4968) BBDE_RS10405 PF01055 Glycosyl hydrolases family 31 BBDE_RS10410 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10415 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10425 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS10430 PF01925 Sulfite exporter TauE/SafE BBDE_RS10440 PF05738 Cna protein B-type domain BBDE_RS10440 PF17802 Prealbumin-like fold domain BBDE_RS10440 PF05737 Collagen binding domain BBDE_RS10460 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS10475 PF03714 Bacterial pullanase-associated domain BBDE_RS10475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBDE_RS10475 PF00128 Alpha amylase, catalytic domain BBDE_RS10480 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10485 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10495 PF16657 Maltogenic Amylase, C-terminal domain BBDE_RS10495 PF00128 Alpha amylase, catalytic domain BBDE_RS10500 PF02446 4-alpha-glucanotransferase BBDE_RS10505 PF00128 Alpha amylase, catalytic domain BBDE_RS10515 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10520 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10525 PF00356 Bacterial regulatory proteins, lacI family BBDE_RS10535 PF00300 Histidine phosphatase superfamily (branch 1) BBDE_RS10550 PF16355 Domain of unknown function (DUF4982) BBDE_RS10550 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BBDE_RS10550 PF02837 Glycosyl hydrolases family 2, sugar binding domain BBDE_RS10550 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BBDE_RS10550 PF00703 Glycosyl hydrolases family 2 BBDE_RS10560 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS10560 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS10560 PF14310 Fibronectin type III-like domain BBDE_RS10565 PF00486 Transcriptional regulatory protein, C terminal BBDE_RS10565 PF00072 Response regulator receiver domain BBDE_RS10575 PF00881 Nitroreductase family BBDE_RS10600 PF02146 Sir2 family BBDE_RS10605 PF13291 ACT domain BBDE_RS10605 PF00291 Pyridoxal-phosphate dependent enzyme BBDE_RS10610 PF00128 Alpha amylase, catalytic domain BBDE_RS10615 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10620 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10625 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10635 PF00480 ROK family BBDE_RS10640 PF16874 Glycosyl hydrolase family 36 C-terminal domain BBDE_RS10640 PF16875 Glycosyl hydrolase family 36 N-terminal domain BBDE_RS10645 PF01171 PP-loop family BBDE_RS10645 PF11734 TilS substrate C-terminal domain BBDE_RS10645 PF14437 MafB19-like deaminase BBDE_RS10650 PF00999 Sodium/hydrogen exchanger family BBDE_RS10660 PF00692 dUTPase BBDE_RS10665 PF00690 Cation transporter/ATPase, N-terminus BBDE_RS10665 PF00689 Cation transporting ATPase, C-terminus BBDE_RS10670 PF00588 SpoU rRNA Methylase family BBDE_RS10670 PF08032 RNA 2'-O ribose methyltransferase substrate binding BBDE_RS10680 PF17912 MalK OB fold domain BBDE_RS10680 PF00005 ABC transporter BBDE_RS10685 PF04397 LytTr DNA-binding domain BBDE_RS10685 PF00072 Response regulator receiver domain BBDE_RS10700 PF00654 Voltage gated chloride channel BBDE_RS10710 PF00005 ABC transporter BBDE_RS10715 PF00528 Binding-protein-dependent transport system inner membrane component BBDE_RS10725 PF03069 Acetamidase/Formamidase family BBDE_RS10730 PF07729 FCD domain BBDE_RS10730 PF00392 Bacterial regulatory proteins, gntR family BBDE_RS10735 PF00132 Bacterial transferase hexapeptide (six repeats) BBDE_RS10735 PF12464 Maltose acetyltransferase BBDE_RS10740 PF00155 Aminotransferase class I and II BBDE_RS10755 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS10755 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS10755 PF14310 Fibronectin type III-like domain BBDE_RS10760 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS10760 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS10760 PF14310 Fibronectin type III-like domain BBDE_RS10785 PF01915 Glycosyl hydrolase family 3 C-terminal domain BBDE_RS10785 PF14310 Fibronectin type III-like domain BBDE_RS10785 PF00933 Glycosyl hydrolase family 3 N terminal domain BBDE_RS10790 PF00400 WD domain, G-beta repeat BBDE_RS10790 PF00069 Protein kinase domain BBDE_RS10805 PF06737 Transglycosylase-like domain BBDE_RS10805 PF07501 G5 domain BBDE_RS10805 PF03990 G5-linked-Ubiquitin-like domain BBDE_RS10810 PF00398 Ribosomal RNA adenine dimethylase BBDE_RS10815 PF08544 GHMP kinases C terminal BBDE_RS10815 PF00288 GHMP kinases N terminal domain BBDE_RS10825 PF13735 tRNA nucleotidyltransferase domain 2 putative BBDE_RS10825 PF12627 Probable RNA and SrmB- binding site of polymerase A BBDE_RS10825 PF01743 Poly A polymerase head domain BBDE_RS10830 PF00293 NUDIX domain BBDE_RS10845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BBDE_RS10845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBDE_RS10845 PF00205 Thiamine pyrophosphate enzyme, central domain BBDE_RS10850 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBDE_RS10855 PF17762 HTH domain found in ParB protein BBDE_RS10855 PF02195 ParB-like nuclease domain BBDE_RS10860 PF13614 AAA domain BBDE_RS10865 PF02527 rRNA small subunit methyltransferase G BBDE_RS10870 PF14804 Jag N-terminus BBDE_RS10870 PF01424 R3H domain BBDE_RS10875 PF02096 60Kd inner membrane protein BBDE_RS10880 PF00825 Ribonuclease P