BBDE_RS00005	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BBDE_RS00010	SM00480	DNA polymerase III beta subunit
BBDE_RS00025	SM00387	Histidine kinase-like ATPases
BBDE_RS00025	SM00433	TopoisomeraseII
BBDE_RS00030	SM00434	DNA Topoisomerase IV
BBDE_RS00040	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BBDE_RS00045	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS00065	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BBDE_RS00105	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBDE_RS00105	SM01091	Transporter associated domain
BBDE_RS00110	SM00947	Carbonic anhydrase
BBDE_RS00160	SM01160	BBDE_RS00160
BBDE_RS00190	SM00220	Serine/Threonine protein kinases, catalytic domain
BBDE_RS00190	SM00740	BBDE_RS00190
BBDE_RS00195	SM00220	Serine/Threonine protein kinases, catalytic domain
BBDE_RS00210	SM00331	Sigma factor PP2C-like phosphatases
BBDE_RS00210	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BBDE_RS00215	SM00240	Forkhead associated domain
BBDE_RS00220	SM00240	Forkhead associated domain
BBDE_RS00275	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BBDE_RS00285	SM00870	BBDE_RS00285
BBDE_RS00400	SM00530	Helix-turn-helix XRE-family like proteins 
BBDE_RS00425	SM00788	Adenylosuccinate synthetase
BBDE_RS00455	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS00460	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS00475	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS00495	SM00796	Allophanate hydrolase subunit 1
BBDE_RS00495	SM00797	Allophanate hydrolase subunit 2
BBDE_RS00500	SM00878	Biotin carboxylase C-terminal domain
BBDE_RS00510	SM00642	Alpha-amylase domain
BBDE_RS00520	SM00642	Alpha-amylase domain
BBDE_RS00610	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS00640	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS00675	SM00327	von Willebrand factor (vWF) type A domain
BBDE_RS00715	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBDE_RS00720	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS00725	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS00745	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS00790	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS00795	SM00900	BBDE_RS00795
BBDE_RS00800	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS00805	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS00810	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS00890	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS00890	SM00962	SRP54-type protein, GTPase domain
BBDE_RS00890	SM00963	SRP54-type protein, helical bundle domain
BBDE_RS00905	SM00938	Nitrogen regulatory protein P-II
BBDE_RS00980	SM00855	Phosphoglycerate mutase family
BBDE_RS00995	SM01217	BBDE_RS00995
BBDE_RS01040	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BBDE_RS01045	SM00448	cheY-homologous receiver domain
BBDE_RS01045	SM00850	LytTr DNA-binding domain
BBDE_RS01055	SM01217	BBDE_RS01055
BBDE_RS01085	SM00342	helix_turn_helix, arabinose operon control protein
BBDE_RS01095	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS01100	SM00493	BBDE_RS01100
BBDE_RS01115	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BBDE_RS01130	SM00917	LeuA allosteric (dimerisation) domain
BBDE_RS01145	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS01190	SM00014	Acid phosphatase homologues
BBDE_RS01195	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BBDE_RS01195	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BBDE_RS01195	SM00493	BBDE_RS01195
BBDE_RS01205	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS01210	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS01255	SM00855	Phosphoglycerate mutase family
BBDE_RS01290	SM00346	helix_turn_helix isocitrate lyase regulation
BBDE_RS01315	SM00448	cheY-homologous receiver domain
BBDE_RS01320	SM00387	Histidine kinase-like ATPases
BBDE_RS01360	SM00563	Phosphate acyltransferases
BBDE_RS01390	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS01435	SM01350	BBDE_RS01435
BBDE_RS01450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBDE_RS01450	SM00895	BBDE_RS01450
BBDE_RS01480	SM00487	DEAD-like helicases superfamily
BBDE_RS01480	SM00490	helicase superfamily c-terminal domain
BBDE_RS01520	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS01520	SM00962	SRP54-type protein, GTPase domain
BBDE_RS01520	SM00963	SRP54-type protein, helical bundle domain
BBDE_RS01525	SM00840	BBDE_RS01525
BBDE_RS01535	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS01550	SM00358	Double-stranded RNA binding motif
BBDE_RS01550	SM00535	Ribonuclease III family
BBDE_RS01585	SM00422	helix_turn_helix, mercury resistance
BBDE_RS01645	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS01665	SM00316	Ribosomal protein S1-like RNA-binding domain
BBDE_RS01685	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BBDE_RS01705	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BBDE_RS01710	SM00649	Ribosomal protein L11/L12
BBDE_RS01740	SM00878	Biotin carboxylase C-terminal domain
BBDE_RS01750	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BBDE_RS01760	SM00642	Alpha-amylase domain
BBDE_RS01775	SM01387	BBDE_RS01775
BBDE_RS01780	SM00316	Ribosomal protein S1-like RNA-binding domain
BBDE_RS01780	SM00322	K homology RNA-binding domain
BBDE_RS01805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBDE_RS01815	SM00342	helix_turn_helix, arabinose operon control protein
BBDE_RS01865	SM00387	Histidine kinase-like ATPases
BBDE_RS01865	SM00388	His Kinase A (phosphoacceptor) domain
BBDE_RS01870	SM00448	cheY-homologous receiver domain
BBDE_RS01870	SM00862	Transcriptional regulatory protein, C terminal
BBDE_RS01890	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS01935	SM00858	BBDE_RS01935
BBDE_RS01940	SM00834	Putative regulatory protein
BBDE_RS01960	SM00883	Chaperonin 10 Kd subunit
BBDE_RS02025	SM00854	Bacterial capsule synthesis protein PGA_cap
BBDE_RS02060	SM00642	Alpha-amylase domain
BBDE_RS02065	SM00829	Enoylreductase
BBDE_RS02090	SM01403	BBDE_RS02090
BBDE_RS02110	SM01382	BBDE_RS02110
BBDE_RS02110	SM01383	BBDE_RS02110
BBDE_RS02125	SM00322	K homology RNA-binding domain
BBDE_RS02145	SM01374	BBDE_RS02145
BBDE_RS02150	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BBDE_RS02225	SM00662	RNA polymerases D
BBDE_RS02245	SM00460	Transglutaminase/protease-like homologues
BBDE_RS02260	SM00316	Ribosomal protein S1-like RNA-binding domain
BBDE_RS02260	SM00322	K homology RNA-binding domain
BBDE_RS02280	SM00904	Riboflavin kinase
BBDE_RS02285	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02295	SM00062	Bacterial periplasmic substrate-binding proteins
BBDE_RS02295	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BBDE_RS02310	SM00996	S-adenosyl-L-homocysteine hydrolase
BBDE_RS02310	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BBDE_RS02315	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02335	SM00387	Histidine kinase-like ATPases
BBDE_RS02340	SM00448	cheY-homologous receiver domain
BBDE_RS02340	SM00850	LytTr DNA-binding domain
BBDE_RS02355	SM01061	CAT RNA binding domain
BBDE_RS02360	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BBDE_RS02400	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS02425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBDE_RS02425	SM00866	BBDE_RS02425
BBDE_RS02430	SM00421	helix_turn_helix, Lux Regulon
BBDE_RS02430	SM00448	cheY-homologous receiver domain
BBDE_RS02455	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02460	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02470	SM00448	cheY-homologous receiver domain
BBDE_RS02470	SM00850	LytTr DNA-binding domain
BBDE_RS02485	SM01217	BBDE_RS02485
BBDE_RS02510	SM00855	Phosphoglycerate mutase family
BBDE_RS02525	SM00387	Histidine kinase-like ATPases
BBDE_RS02575	SM00226	Low molecular weight phosphatase family
BBDE_RS02660	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02685	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02700	SM00905	Dihydroneopterin aldolase
BBDE_RS02715	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02755	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS02790	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02850	SM00507	HNH nucleases
BBDE_RS02945	SM00937	BBDE_RS02945
BBDE_RS02970	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS02975	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03030	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBDE_RS03030	SM01240	BBDE_RS03030
BBDE_RS03040	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS03045	SM00642	Alpha-amylase domain
BBDE_RS03055	SM00479	BBDE_RS03055
BBDE_RS03065	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03115	SM00937	BBDE_RS03115
BBDE_RS03120	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03140	SM00062	Bacterial periplasmic substrate-binding proteins
BBDE_RS03145	SM00062	Bacterial periplasmic substrate-binding proteins
BBDE_RS03155	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03185	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS03205	SM00813	Alpha-L-arabinofuranosidase C-terminus
BBDE_RS03245	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03250	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03270	SM00341	Helicase and RNase D C-terminal
BBDE_RS03270	SM00487	DEAD-like helicases superfamily
BBDE_RS03270	SM00490	helicase superfamily c-terminal domain
BBDE_RS03270	SM00956	BBDE_RS03270
BBDE_RS03290	SM01005	Alanine racemase, C-terminal domain
BBDE_RS03295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBDE_RS03300	SM00400	zinc finger
BBDE_RS03300	SM00493	BBDE_RS03300
BBDE_RS03325	SM00838	Elongation factor G C-terminus
BBDE_RS03325	SM00889	Elongation factor G, domain IV
BBDE_RS03360	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03365	SM00062	Bacterial periplasmic substrate-binding proteins
BBDE_RS03380	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03405	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03410	SM00062	Bacterial periplasmic substrate-binding proteins
BBDE_RS03425	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03425	SM00930	BBDE_RS03425
BBDE_RS03450	SM00244	prohibitin homologues
BBDE_RS03460	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03475	SM00861	Transketolase, pyrimidine binding domain
BBDE_RS03480	SM00829	Enoylreductase
BBDE_RS03485	SM01001	AIR carboxylase
BBDE_RS03505	SM01209	BBDE_RS03505
BBDE_RS03505	SM01210	BBDE_RS03505
BBDE_RS03535	SM01211	BBDE_RS03535
BBDE_RS03580	SM00838	Elongation factor G C-terminus
BBDE_RS03580	SM00889	Elongation factor G, domain IV
BBDE_RS03590	SM00841	Elongation factor P, C-terminal
BBDE_RS03590	SM01185	BBDE_RS03590
BBDE_RS03600	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BBDE_RS03605	SM00851	MGS-like domain
BBDE_RS03605	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BBDE_RS03610	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BBDE_RS03615	SM00072	Guanylate kinase homologues.
BBDE_RS03635	SM01409	BBDE_RS03635
BBDE_RS03665	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03700	SM00411	bacterial (prokaryotic) histone like domain
BBDE_RS03755	SM00986	Uracil DNA glycosylase superfamily
BBDE_RS03755	SM00987	UreE urease accessory protein, C-terminal domain 
BBDE_RS03780	SM00448	cheY-homologous receiver domain
BBDE_RS03780	SM00862	Transcriptional regulatory protein, C terminal
BBDE_RS03785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBDE_RS03785	SM00387	Histidine kinase-like ATPases
BBDE_RS03785	SM00388	His Kinase A (phosphoacceptor) domain
BBDE_RS03790	SM00357	Cold shock protein domain
BBDE_RS03805	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03805	SM01086	C-terminal, D2-small domain, of ClpB protein
BBDE_RS03830	SM00062	Bacterial periplasmic substrate-binding proteins
BBDE_RS03830	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BBDE_RS03835	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03840	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03845	SM00062	Bacterial periplasmic substrate-binding proteins
BBDE_RS03845	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BBDE_RS03865	SM00487	DEAD-like helicases superfamily
BBDE_RS03865	SM00490	helicase superfamily c-terminal domain
BBDE_RS03870	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03895	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03895	SM00994	ClpX C4-type zinc finger
BBDE_RS03895	SM01086	C-terminal, D2-small domain, of ClpB protein
BBDE_RS03935	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03960	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03970	SM00344	helix_turn_helix ASNC type
BBDE_RS03975	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS03985	SM00421	helix_turn_helix, Lux Regulon
BBDE_RS03985	SM00448	cheY-homologous receiver domain
BBDE_RS03990	SM00387	Histidine kinase-like ATPases
BBDE_RS04010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBDE_RS04065	SM00342	helix_turn_helix, arabinose operon control protein
BBDE_RS04070	SM00855	Phosphoglycerate mutase family
BBDE_RS04085	SM00487	DEAD-like helicases superfamily
BBDE_RS04085	SM00490	helicase superfamily c-terminal domain
BBDE_RS04095	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS04115	SM01350	BBDE_RS04115
BBDE_RS04210	SM00487	DEAD-like helicases superfamily
BBDE_RS04210	SM00490	helicase superfamily c-terminal domain
BBDE_RS04210	SM00982	BBDE_RS04210
BBDE_RS04210	SM01058	CarD-like/TRCF domain
BBDE_RS04215	SM01192	BBDE_RS04215
BBDE_RS04215	SM01193	BBDE_RS04215
BBDE_RS04265	SM00387	Histidine kinase-like ATPases
BBDE_RS04275	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS04320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BBDE_RS04320	SM00387	Histidine kinase-like ATPases
BBDE_RS04320	SM00388	His Kinase A (phosphoacceptor) domain
BBDE_RS04325	SM00448	cheY-homologous receiver domain
BBDE_RS04325	SM00862	Transcriptional regulatory protein, C terminal
BBDE_RS04330	SM00642	Alpha-amylase domain
BBDE_RS04335	SM01058	CarD-like/TRCF domain
BBDE_RS04350	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS04365	SM00316	Ribosomal protein S1-like RNA-binding domain
BBDE_RS04375	SM00487	DEAD-like helicases superfamily
BBDE_RS04375	SM00490	helicase superfamily c-terminal domain
BBDE_RS04520	SM01022	BBDE_RS04520
BBDE_RS04545	SM00479	BBDE_RS04545
BBDE_RS04565	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS04635	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS04805	SM00448	cheY-homologous receiver domain
BBDE_RS04805	SM01012	BBDE_RS04805
BBDE_RS04810	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BBDE_RS04810	SM00475	5'-3' exonuclease
BBDE_RS04810	SM00482	DNA polymerase A domain
BBDE_RS04825	SM00642	Alpha-amylase domain
BBDE_RS04870	SM00421	helix_turn_helix, Lux Regulon
BBDE_RS04870	SM00448	cheY-homologous receiver domain
BBDE_RS04935	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS04940	SM00363	S4 RNA-binding domain
BBDE_RS04940	SM01390	BBDE_RS04940
BBDE_RS04950	SM00855	Phosphoglycerate mutase family
BBDE_RS04965	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BBDE_RS04970	SM00732	Likely ribonuclease with RNase H fold.
BBDE_RS05000	SM00632	BBDE_RS05000
BBDE_RS05000	SM00642	Alpha-amylase domain
BBDE_RS05000	SM01066	Carbohydrate binding domain
BBDE_RS05020	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS05075	SM00116	Domain in cystathionine beta-synthase and other proteins.
BBDE_RS05075	SM01091	Transporter associated domain
BBDE_RS05090	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BBDE_RS05090	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BBDE_RS05120	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS05140	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS05220	SM00838	Elongation factor G C-terminus
BBDE_RS05225	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBDE_RS05250	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS05260	SM00855	Phosphoglycerate mutase family
BBDE_RS05305	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BBDE_RS05345	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS05360	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS05380	SM00422	helix_turn_helix, mercury resistance
BBDE_RS05385	SM00829	Enoylreductase
BBDE_RS05410	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS05415	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS05435	SM00919	Malic enzyme, NAD binding domain
BBDE_RS05435	SM01274	BBDE_RS05435
BBDE_RS05495	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BBDE_RS05495	SM00465	GIY-YIG type nucleases (URI domain)
BBDE_RS05555	SM00861	Transketolase, pyrimidine binding domain
BBDE_RS05565	SM00271	DnaJ molecular chaperone homology domain
BBDE_RS05610	SM00240	Forkhead associated domain
BBDE_RS05615	SM00422	helix_turn_helix, mercury resistance
BBDE_RS05635	SM00487	DEAD-like helicases superfamily
BBDE_RS05635	SM00490	helicase superfamily c-terminal domain
BBDE_RS05635	SM01142	BBDE_RS05635
BBDE_RS05670	SM00363	S4 RNA-binding domain
BBDE_RS05680	SM00798	AICARFT/IMPCHase bienzyme
BBDE_RS05680	SM00851	MGS-like domain
BBDE_RS05690	SM00881	CoA binding domain
BBDE_RS05705	SM01323	BBDE_RS05705
BBDE_RS05710	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS05715	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BBDE_RS05745	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BBDE_RS05815	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBDE_RS05860	SM01240	BBDE_RS05860
BBDE_RS05865	SM01329	BBDE_RS05865
BBDE_RS05925	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BBDE_RS05935	SM00062	Bacterial periplasmic substrate-binding proteins
BBDE_RS05945	SM00855	Phosphoglycerate mutase family
BBDE_RS05970	SM00448	cheY-homologous receiver domain
BBDE_RS05990	SM00855	Phosphoglycerate mutase family
BBDE_RS06070	SM00479	BBDE_RS06070
BBDE_RS06100	SM00507	HNH nucleases
BBDE_RS06120	SM00487	DEAD-like helicases superfamily
BBDE_RS06120	SM00490	helicase superfamily c-terminal domain
BBDE_RS06130	SM01400	BBDE_RS06130
BBDE_RS06165	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS06200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBDE_RS06230	SM00363	S4 RNA-binding domain
BBDE_RS06250	SM00363	S4 RNA-binding domain
BBDE_RS06265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBDE_RS06305	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BBDE_RS06315	SM00873	B3/4 domain
BBDE_RS06315	SM00874	tRNA synthetase B5 domain
BBDE_RS06315	SM00896	Ferredoxin-fold anticodon binding domain
BBDE_RS06325	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BBDE_RS06335	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS06360	SM01230	BBDE_RS06360
BBDE_RS06405	SM00342	helix_turn_helix, arabinose operon control protein
BBDE_RS06440	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS06455	SM00292	breast cancer carboxy-terminal domain
BBDE_RS06455	SM00532	Ligase N family
BBDE_RS06475	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS06495	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS06505	SM01103	BBDE_RS06505
BBDE_RS06515	SM00487	DEAD-like helicases superfamily
BBDE_RS06515	SM00490	helicase superfamily c-terminal domain
BBDE_RS06530	SM00894	Excalibur calcium-binding domain
BBDE_RS06580	SM00829	Enoylreductase
BBDE_RS06605	SM00506	Appr-1"-p processing enzyme
BBDE_RS06615	SM01266	BBDE_RS06615
BBDE_RS06660	SM00292	breast cancer carboxy-terminal domain
BBDE_RS06660	SM00479	BBDE_RS06660
BBDE_RS06670	SM00474	3'-5' exonuclease
BBDE_RS06725	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS06780	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBDE_RS06780	SM00954	Region found in RelA / SpoT proteins
BBDE_RS06805	SM00434	DNA Topoisomerase IV
BBDE_RS06810	SM00487	DEAD-like helicases superfamily
BBDE_RS06810	SM00490	helicase superfamily c-terminal domain
BBDE_RS06815	SM00530	Helix-turn-helix XRE-family like proteins 
BBDE_RS06835	SM00387	Histidine kinase-like ATPases
BBDE_RS06835	SM00433	TopoisomeraseII
BBDE_RS06855	SM00220	Serine/Threonine protein kinases, catalytic domain
BBDE_RS06855	SM00740	BBDE_RS06855
BBDE_RS06860	SM00563	Phosphate acyltransferases
BBDE_RS06875	SM00957	SecA DEAD-like domain
BBDE_RS06875	SM00958	SecA preprotein cross-linking domain
BBDE_RS06890	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS06900	SM00530	Helix-turn-helix XRE-family like proteins 
BBDE_RS06915	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS06915	SM00843	BBDE_RS06915
BBDE_RS06935	SM00729	Elongator protein 3, MiaB family, Radical SAM
BBDE_RS06940	SM00954	Region found in RelA / SpoT proteins
BBDE_RS06960	SM00421	helix_turn_helix, Lux Regulon
BBDE_RS06960	SM00448	cheY-homologous receiver domain
BBDE_RS06970	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS06985	SM00342	helix_turn_helix, arabinose operon control protein
BBDE_RS06990	SM01266	BBDE_RS06990
BBDE_RS07015	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BBDE_RS07125	SM00257	Lysin motif
BBDE_RS07125	SM00641	Glycosyl hydrolases family 25
BBDE_RS07125	SM01095	Cpl-7 lysozyme C-terminal domain
BBDE_RS07180	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS07210	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS07240	SM00838	Elongation factor G C-terminus
BBDE_RS07295	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BBDE_RS07300	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BBDE_RS07355	SM01011	Aminopeptidase P, N-terminal domain
BBDE_RS07365	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS07395	SM01149	BBDE_RS07395
BBDE_RS07485	SM00257	Lysin motif
BBDE_RS07515	SM00487	DEAD-like helicases superfamily
BBDE_RS07515	SM00490	helicase superfamily c-terminal domain
BBDE_RS07515	SM00847	Helicase associated domain (HA2)  Add an annotation
BBDE_RS07530	SM01230	BBDE_RS07530
BBDE_RS07535	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS07540	SM00240	Forkhead associated domain
BBDE_RS07635	SM00481	DNA polymerase alpha chain like domain
BBDE_RS07670	SM00864	Tubulin/FtsZ family, GTPase domain
BBDE_RS07670	SM00865	Tubulin/FtsZ family, C-terminal domain
BBDE_RS07690	SM00422	helix_turn_helix, mercury resistance
BBDE_RS07715	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS07725	SM00640	Glycosyl hydrolases family 32
BBDE_RS07735	SM00421	helix_turn_helix, Lux Regulon
BBDE_RS07735	SM00448	cheY-homologous receiver domain
BBDE_RS07740	SM00093	SERine  Proteinase INhibitors
BBDE_RS07840	SM00481	DNA polymerase alpha chain like domain
BBDE_RS07845	SM00756	BBDE_RS07845
BBDE_RS07875	SM00530	Helix-turn-helix XRE-family like proteins 
BBDE_RS07885	SM00530	Helix-turn-helix XRE-family like proteins 
BBDE_RS07915	SM00487	DEAD-like helicases superfamily
BBDE_RS07915	SM00490	helicase superfamily c-terminal domain
BBDE_RS07935	SM01038	Beta galactosidase small chain
BBDE_RS07940	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS07950	SM00342	helix_turn_helix, arabinose operon control protein
BBDE_RS07960	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS07965	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBDE_RS07970	SM01266	BBDE_RS07970
BBDE_RS07975	SM01217	BBDE_RS07975
BBDE_RS08000	SM00822	BBDE_RS08000
BBDE_RS08005	SM00422	helix_turn_helix, mercury resistance
BBDE_RS08020	SM00347	helix_turn_helix multiple antibiotic resistance protein
BBDE_RS08045	SM01217	BBDE_RS08045
BBDE_RS08060	SM00448	cheY-homologous receiver domain
BBDE_RS08060	SM00850	LytTr DNA-binding domain
BBDE_RS08065	SM01217	BBDE_RS08065
BBDE_RS08120	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS08205	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS08265	SM00487	DEAD-like helicases superfamily
BBDE_RS08265	SM00490	helicase superfamily c-terminal domain
BBDE_RS08290	SM01217	BBDE_RS08290
BBDE_RS08330	SM00479	BBDE_RS08330
BBDE_RS08420	SM00479	BBDE_RS08420
BBDE_RS08450	SM00849	Metallo-beta-lactamase superfamily
BBDE_RS08455	SM01130	BBDE_RS08455
BBDE_RS08465	SM00746	metallochaperone-like domain
BBDE_RS08515	SM00530	Helix-turn-helix XRE-family like proteins 
BBDE_RS08520	SM00220	Serine/Threonine protein kinases, catalytic domain
BBDE_RS08525	SM00060	Fibronectin type 3 domain
BBDE_RS08540	SM00460	Transglutaminase/protease-like homologues
BBDE_RS08545	SM00331	Sigma factor PP2C-like phosphatases
BBDE_RS08545	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BBDE_RS08555	SM00240	Forkhead associated domain
BBDE_RS08565	SM00663	RNA polymerase I subunit A N-terminus
BBDE_RS08580	SM00478	endonuclease III
BBDE_RS08580	SM00525	BBDE_RS08580
BBDE_RS08635	SM00420	helix_turn_helix, Deoxyribose operon repressor
BBDE_RS08635	SM01134	BBDE_RS08635
BBDE_RS08665	SM00100	Cyclic nucleotide-monophosphate binding domain
BBDE_RS08665	SM00419	helix_turn_helix, cAMP Regulatory protein
BBDE_RS08680	SM01329	BBDE_RS08680
BBDE_RS08725	SM01208	BBDE_RS08725
BBDE_RS08730	SM00226	Low molecular weight phosphatase family
BBDE_RS08990	SM00530	Helix-turn-helix XRE-family like proteins 
BBDE_RS09065	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09095	SM00226	Low molecular weight phosphatase family
BBDE_RS09135	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS09170	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09185	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS09200	SM01007	Class II Aldolase and Adducin N-terminal domain
BBDE_RS09210	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS09240	SM00836	DALR anticodon binding domain
BBDE_RS09240	SM01016	Arginyl tRNA synthetase N terminal dom
BBDE_RS09305	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09325	SM00421	helix_turn_helix, Lux Regulon
BBDE_RS09345	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09410	SM00642	Alpha-amylase domain
BBDE_RS09430	SM00862	Transcriptional regulatory protein, C terminal
BBDE_RS09435	SM00478	endonuclease III
BBDE_RS09435	SM00525	BBDE_RS09435
BBDE_RS09455	SM00830	Chorismate mutase type II
BBDE_RS09460	SM00344	helix_turn_helix ASNC type
BBDE_RS09465	SM00357	Cold shock protein domain
BBDE_RS09465	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09465	SM00959	Rho termination factor, N-terminal domain
BBDE_RS09490	SM00845	GatB domain
BBDE_RS09530	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09530	SM01086	C-terminal, D2-small domain, of ClpB protein
BBDE_RS09550	SM00327	von Willebrand factor (vWF) type A domain
BBDE_RS09590	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09625	SM00421	helix_turn_helix, Lux Regulon
BBDE_RS09625	SM00448	cheY-homologous receiver domain
BBDE_RS09660	SM01400	BBDE_RS09660
BBDE_RS09680	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS09700	SM00984	UDP binding domain
BBDE_RS09770	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09875	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09890	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS09910	SM00487	DEAD-like helicases superfamily
BBDE_RS09910	SM00490	helicase superfamily c-terminal domain
BBDE_RS09975	SM00813	Alpha-L-arabinofuranosidase C-terminus
BBDE_RS09985	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10005	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS10015	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10070	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10080	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS10085	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS10135	SM01068	Putative carbohydrate binding domain
BBDE_RS10150	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10185	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS10190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBDE_RS10245	SM01217	BBDE_RS10245
BBDE_RS10250	SM00812	Alpha-L-fucosidase
BBDE_RS10300	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10320	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10340	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10345	SM00640	Glycosyl hydrolases family 32
BBDE_RS10380	SM00422	helix_turn_helix, mercury resistance
BBDE_RS10385	SM00271	DnaJ molecular chaperone homology domain
BBDE_RS10400	SM00098	Alkaline phosphatase homologues
BBDE_RS10425	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10460	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10475	SM00642	Alpha-amylase domain
BBDE_RS10495	SM00642	Alpha-amylase domain
BBDE_RS10505	SM00642	Alpha-amylase domain
BBDE_RS10525	SM00354	helix_turn _helix lactose operon repressor
BBDE_RS10535	SM00855	Phosphoglycerate mutase family
BBDE_RS10560	SM01217	BBDE_RS10560
BBDE_RS10565	SM00448	cheY-homologous receiver domain
BBDE_RS10565	SM00850	LytTr DNA-binding domain
BBDE_RS10610	SM00642	Alpha-amylase domain
BBDE_RS10665	SM00831	Cation transporter/ATPase, N-terminus
BBDE_RS10670	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BBDE_RS10680	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS10685	SM00448	cheY-homologous receiver domain
BBDE_RS10685	SM00850	LytTr DNA-binding domain
BBDE_RS10710	SM00382	ATPases associated with a variety of cellular activities
BBDE_RS10730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BBDE_RS10730	SM00895	BBDE_RS10730
BBDE_RS10735	SM01266	BBDE_RS10735
BBDE_RS10755	SM01217	BBDE_RS10755
BBDE_RS10760	SM01217	BBDE_RS10760
BBDE_RS10765	SM00014	Acid phosphatase homologues
BBDE_RS10785	SM01217	BBDE_RS10785
BBDE_RS10790	SM00220	Serine/Threonine protein kinases, catalytic domain
BBDE_RS10805	SM01208	BBDE_RS10805
BBDE_RS10810	SM00650	Ribosomal RNA adenine dimethylases
BBDE_RS10825	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BBDE_RS10855	SM00470	ParB-like nuclease domain
BBDE_RS10870	SM00393	Putative single-stranded nucleic acids-binding domain
