locus-tag	class	description
JQN89_RS00010	COG0297	glycogen (starch) synthase activity
JQN89_RS00015	COG1119	ATPase activity
JQN89_RS00020	COG0561	phosphatase activity
JQN89_RS00025	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JQN89_RS00055	COG4974	Belongs to the 'phage' integrase family
JQN89_RS00120	COG1063	alcohol dehydrogenase
JQN89_RS00130	COG4989	oxidoreductase activity
JQN89_RS00155	COG0588	phosphoglycerate mutase activity
JQN89_RS00165	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JQN89_RS00190	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JQN89_RS00200	COG0543	2 iron, 2 sulfur cluster binding
JQN89_RS00205	COG0167	dihydroorotate dehydrogenase activity
JQN89_RS00225	COG0583	DNA-binding transcription factor activity
JQN89_RS00245	COG2826	transposase and inactivated derivatives, IS30 family
JQN89_RS00255	COG3189	MarR family transcriptional regulator
JQN89_RS00280	COG1122	ATPase activity
JQN89_RS00305	COG0681	Belongs to the peptidase S26 family
JQN89_RS00310	COG0833	amino acid
JQN89_RS00325	COG0706	membrane insertase activity
JQN89_RS00330	COG0706	membrane insertase activity
JQN89_RS00335	COG1051	belongs to the nudix hydrolase family
JQN89_RS00400	COG0745	RESPONSE REGULATOR receiver
JQN89_RS00480	COG0133	tryptophan synthase activity
JQN89_RS00495	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JQN89_RS00510	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JQN89_RS00530	COG1716	ATPase activity
JQN89_RS00590	COG1187	pseudouridine synthase activity
JQN89_RS00595	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JQN89_RS00620	COG0045	succinate-CoA ligase (ADP-forming) activity
JQN89_RS00705	COG4974	Belongs to the 'phage' integrase family
JQN89_RS00745	COG3617	BRO family, N-terminal domain
JQN89_RS00975	COG2826	transposase and inactivated derivatives, IS30 family
JQN89_RS00990	COG2826	transposase and inactivated derivatives, IS30 family
JQN89_RS01025	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JQN89_RS01040	COG0436	Aminotransferase
JQN89_RS01055	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JQN89_RS01080	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JQN89_RS01130	COG1129	ABC transporter
JQN89_RS01145	COG1028	Short-chain dehydrogenase reductase Sdr
JQN89_RS01150	COG0488	(ABC) transporter
JQN89_RS01175	COG0693	protein deglycase activity
JQN89_RS01185	COG0575	Belongs to the CDS family
JQN89_RS01225	COG0516	GMP reductase activity
JQN89_RS01310	COG1192	Involved in chromosome partitioning
JQN89_RS01455	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JQN89_RS01455	COG0551	DNA topoisomerase type I activity
JQN89_RS01475	COG3942	CHAP domain
JQN89_RS01535	COG0456	acetyltransferase
JQN89_RS01545	COG0802	atpase or kinase
JQN89_RS01555	COG1228	amidohydrolase
JQN89_RS01565	COG1555	photosystem II stabilization
JQN89_RS01565	COG1596	polysaccharide export
JQN89_RS01575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JQN89_RS01580	COG0598	Magnesium transport protein CorA
JQN89_RS01585	COG0406	alpha-ribazole phosphatase activity
JQN89_RS01670	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JQN89_RS01670	COG0551	DNA topoisomerase type I activity
JQN89_RS01705	COG3843	relaxase mobilization nuclease domain protein
JQN89_RS01775	COG3942	CHAP domain
JQN89_RS01775	COG1705	Flagellar rod assembly protein muramidase FlgJ
JQN89_RS01815	COG0489	protein tyrosine kinase activity
JQN89_RS01855	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JQN89_RS01865	COG2801	Transposase and inactivated derivatives
JQN89_RS01870	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JQN89_RS01895	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JQN89_RS01905	COG1201	RNA secondary structure unwinding
JQN89_RS01910	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JQN89_RS01920	COG0187	DNA topoisomerase II activity
JQN89_RS01925	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JQN89_RS01935	COG0142	geranyltranstransferase activity
JQN89_RS01955	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JQN89_RS01970	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JQN89_RS01995	COG1396	sequence-specific DNA binding
JQN89_RS02000	COG1058	Belongs to the CinA family
JQN89_RS02000	COG1546	Belongs to the CinA family
JQN89_RS02030	COG2357	RelA SpoT domain protein
JQN89_RS02040	COG0670	Belongs to the BI1 family
JQN89_RS02055	COG2197	response regulator
JQN89_RS02110	COG0708	Exodeoxyribonuclease III
JQN89_RS02125	COG0601	transmembrane transport
JQN89_RS02130	COG4166	transmembrane transport
JQN89_RS02145	COG0287	Prephenate dehydrogenase
JQN89_RS02150	COG0077	Prephenate dehydratase
JQN89_RS02150	COG1605	Chorismate mutase
JQN89_RS02160	COG1217	gtp-binding protein TYPA
JQN89_RS02165	COG0477	Major facilitator Superfamily
JQN89_RS02170	COG1104	cysteine desulfurase activity
JQN89_RS02180	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JQN89_RS02185	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JQN89_RS02195	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JQN89_RS02200	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JQN89_RS02210	COG0577	efflux transmembrane transporter activity
JQN89_RS02210	COG1136	(ABC) transporter
JQN89_RS02230	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JQN89_RS02255	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JQN89_RS02265	COG2017	converts alpha-aldose to the beta-anomer
JQN89_RS02270	COG2017	converts alpha-aldose to the beta-anomer
JQN89_RS02280	COG1595	DNA-templated transcription, initiation
JQN89_RS02295	COG1196	nuclear chromosome segregation
JQN89_RS02300	COG0285	dihydrofolate synthase activity
JQN89_RS02310	COG0006	proline dipeptidase activity
JQN89_RS02330	COG0601	transmembrane transport
JQN89_RS02335	COG2826	transposase and inactivated derivatives, IS30 family
JQN89_RS02340	COG4166	transmembrane transport
JQN89_RS02360	COG1940	carbohydrate kinase activity
JQN89_RS02420	COG1472	Belongs to the glycosyl hydrolase 3 family
JQN89_RS02430	COG0395	ABC-type sugar transport system, permease component
JQN89_RS02435	COG1175	transmembrane transport
JQN89_RS02465	COG3657	addiction module killer protein
JQN89_RS02470	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JQN89_RS02520	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JQN89_RS02530	COG0768	penicillin binding
JQN89_RS02555	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JQN89_RS02585	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JQN89_RS02590	COG2813	Specifically methylates the guanine in position
JQN89_RS02595	COG1643	Atp-dependent helicase
JQN89_RS02610	COG0174	glutamine synthetase
JQN89_RS02660	COG0656	L-ascorbic acid biosynthetic process
JQN89_RS02685	COG4716	Myosin-crossreactive antigen
JQN89_RS02695	COG0587	DNA-directed DNA polymerase activity
JQN89_RS02710	COG1373	ATPase (AAA superfamily
JQN89_RS02740	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JQN89_RS02770	COG0352	thiamine-phosphate diphosphorylase activity
JQN89_RS02770	COG0351	phosphomethylpyrimidine kinase
JQN89_RS02780	COG2271	Major facilitator Superfamily
JQN89_RS02810	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JQN89_RS02865	COG3480	Lon protease (S16) C-terminal proteolytic domain
JQN89_RS02900	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JQN89_RS02920	COG0765	amino acid transport
JQN89_RS02930	COG1126	abc transporter atp-binding protein
JQN89_RS02945	COG0626	cystathionine gamma-synthase activity
JQN89_RS02955	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JQN89_RS02970	COG0284	orotidine-5'-phosphate decarboxylase activity
JQN89_RS02995	COG0577	efflux transmembrane transporter activity
JQN89_RS02995	COG1136	(ABC) transporter
JQN89_RS03000	COG0390	transport system, permease component
JQN89_RS03015	COG4106	trans-aconitate 2-methyltransferase activity
JQN89_RS03030	COG1250	3-hydroxyacyl-CoA dehydrogenase
JQN89_RS03035	COG1501	Belongs to the glycosyl hydrolase 31 family
JQN89_RS03050	COG0395	ABC-type sugar transport system, permease component
JQN89_RS03090	COG1122	ATPase activity
JQN89_RS03145	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JQN89_RS03150	COG2814	Major facilitator Superfamily
JQN89_RS03185	COG0745	RESPONSE REGULATOR receiver
JQN89_RS03195	COG4581	dead DEAH box helicase
JQN89_RS03200	COG2326	polyphosphate kinase activity
JQN89_RS03220	COG0765	amino acid transport
JQN89_RS03225	COG0765	amino acid transport
JQN89_RS03230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JQN89_RS03235	COG1126	abc transporter atp-binding protein
JQN89_RS03255	COG1196	nuclear chromosome segregation
JQN89_RS03270	COG0477	Major facilitator Superfamily
JQN89_RS03280	COG0402	S-adenosylhomocysteine deaminase activity
JQN89_RS03290	COG0589	response to stress
JQN89_RS03300	COG1278	Cold shock
JQN89_RS03305	COG2205	protein histidine kinase activity
JQN89_RS03310	COG0745	RESPONSE REGULATOR receiver
JQN89_RS03330	COG1278	Cold shock
JQN89_RS03345	COG0714	Associated with various cellular activities
JQN89_RS03395	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JQN89_RS03435	COG0586	Pfam SNARE associated Golgi protein
JQN89_RS03440	COG0560	Phosphoserine phosphatase
JQN89_RS03445	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JQN89_RS03475	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
JQN89_RS03520	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JQN89_RS03525	COG3250	beta-galactosidase activity
JQN89_RS03530	COG1609	Transcriptional regulator
JQN89_RS03540	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JQN89_RS03555	COG1132	(ABC) transporter
JQN89_RS03560	COG1132	(ABC) transporter
JQN89_RS03615	COG0602	queuosine metabolic process
JQN89_RS03620	COG1328	CTP reductase activity
JQN89_RS03620	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JQN89_RS03630	COG1570	exodeoxyribonuclease VII activity
JQN89_RS03635	COG1722	exodeoxyribonuclease VII activity
JQN89_RS03640	COG2249	NAD(P)H dehydrogenase (quinone) activity
JQN89_RS03645	COG1022	Amp-dependent synthetase and ligase
JQN89_RS03650	COG1970	mechanosensitive ion channel activity
JQN89_RS03675	COG0248	Ppx GppA phosphatase
JQN89_RS03680	COG0436	Aminotransferase
JQN89_RS03735	COG3590	peptidase
JQN89_RS03770	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JQN89_RS03785	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JQN89_RS03790	COG0009	L-threonylcarbamoyladenylate synthase
JQN89_RS03795	COG0110	maltose O-acetyltransferase activity
JQN89_RS03850	COG1070	Carbohydrate kinase
JQN89_RS03880	COG3507	Belongs to the glycosyl hydrolase 43 family
JQN89_RS03885	COG3507	Belongs to the glycosyl hydrolase 43 family
JQN89_RS03890	COG0395	ABC-type sugar transport system, permease component
JQN89_RS03895	COG1175	transmembrane transport
JQN89_RS03905	COG1609	Transcriptional regulator
JQN89_RS03910	COG1979	alcohol dehydrogenase
JQN89_RS03920	COG2814	Major facilitator Superfamily
JQN89_RS03925	COG2814	Major facilitator Superfamily
JQN89_RS03935	COG0242	peptide deformylase activity
JQN89_RS03940	COG2814	Major facilitator Superfamily
JQN89_RS03955	COG4214	carbohydrate transport
JQN89_RS03975	COG1129	ABC transporter
JQN89_RS03980	COG1940	carbohydrate kinase activity
JQN89_RS03995	COG1946	Acyl-CoA thioesterase
JQN89_RS04005	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JQN89_RS04010	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JQN89_RS04020	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JQN89_RS04025	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JQN89_RS04065	COG1454	alcohol dehydrogenase
JQN89_RS04070	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JQN89_RS04085	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JQN89_RS04100	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JQN89_RS04105	COG1687	branched-chain amino acid
JQN89_RS04110	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JQN89_RS04130	COG0589	response to stress
JQN89_RS04135	COG3883	PFAM NLP P60 protein
JQN89_RS04135	COG0791	NLP P60 protein
JQN89_RS04145	COG3942	CHAP domain
JQN89_RS04145	COG1705	Flagellar rod assembly protein muramidase FlgJ
JQN89_RS04150	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JQN89_RS04160	COG5002	protein histidine kinase activity
JQN89_RS04165	COG0704	Plays a role in the regulation of phosphate uptake
JQN89_RS04175	COG1575	Belongs to the MenA family. Type 1 subfamily
JQN89_RS04180	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JQN89_RS04190	COG2814	Major facilitator Superfamily
JQN89_RS04225	COG2197	response regulator
JQN89_RS04250	COG0395	ABC-type sugar transport system, permease component
JQN89_RS04255	COG1175	transmembrane transport
JQN89_RS04280	COG1803	Methylglyoxal synthase
JQN89_RS04280	COG1597	lipid kinase activity
JQN89_RS04285	COG3711	transcriptional antiterminator
JQN89_RS04315	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JQN89_RS04325	COG0328	RNA-DNA hybrid ribonuclease activity
JQN89_RS04350	COG0196	riboflavin kinase activity
JQN89_RS04385	COG3534	alpha-L-arabinofuranosidase
JQN89_RS04400	COG2308	Evidence 4 Homologs of previously reported genes of
JQN89_RS04505	COG0255	Belongs to the universal ribosomal protein uL29 family
JQN89_RS04560	COG1454	alcohol dehydrogenase
JQN89_RS04560	COG1012	belongs to the aldehyde dehydrogenase family
JQN89_RS04575	COG1063	alcohol dehydrogenase
JQN89_RS04595	COG1063	alcohol dehydrogenase
JQN89_RS04625	COG1739	Uncharacterized protein family UPF0029
JQN89_RS04630	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JQN89_RS04650	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JQN89_RS04665	COG0531	amino acid
JQN89_RS04670	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JQN89_RS04760	COG2252	PERMEase
JQN89_RS04780	COG1122	ATPase activity
JQN89_RS04815	COG2826	transposase and inactivated derivatives, IS30 family
JQN89_RS04830	COG3507	Belongs to the glycosyl hydrolase 43 family
JQN89_RS04835	COG3507	Belongs to the glycosyl hydrolase 43 family
JQN89_RS04860	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JQN89_RS04870	COG1268	BioY protein
JQN89_RS04925	COG0250	Participates in transcription elongation, termination and antitermination
JQN89_RS04930	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JQN89_RS04940	COG0436	Aminotransferase
JQN89_RS04965	COG1530	ribonuclease E activity
JQN89_RS04970	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JQN89_RS04995	COG0083	homoserine kinase activity
JQN89_RS05000	COG0460	homoserine dehydrogenase
JQN89_RS05015	COG1309	transcriptional regulator
JQN89_RS05035	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JQN89_RS05040	COG0446	pyridine nucleotide-disulphide oxidoreductase
JQN89_RS05045	COG0167	dihydroorotate dehydrogenase activity
JQN89_RS05070	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JQN89_RS05075	COG0406	alpha-ribazole phosphatase activity
JQN89_RS05075	COG0494	nUDIX hydrolase
JQN89_RS05100	COG0584	glycerophosphoryl diester phosphodiesterase
JQN89_RS05115	COG2986	histidine ammonia-lyase
JQN89_RS05130	COG0179	Fumarylacetoacetate (FAA) hydrolase
JQN89_RS05150	COG1088	dTDP-glucose 4,6-dehydratase activity
JQN89_RS05165	COG1216	Glycosyl transferase, family 2
JQN89_RS05190	COG1216	Glycosyl transferase, family 2
JQN89_RS05280	COG0860	N-Acetylmuramoyl-L-alanine amidase
JQN89_RS05280	COG2247	cell wall binding repeat
JQN89_RS05290	COG0463	Glycosyl transferase, family 2
JQN89_RS05310	COG1129	ABC transporter
JQN89_RS05330	COG0084	hydrolase, TatD family'
JQN89_RS05340	COG1132	(ABC) transporter
JQN89_RS05345	COG1132	(ABC) transporter
JQN89_RS05355	COG1609	Transcriptional regulator
JQN89_RS05420	COG1132	(ABC) transporter
JQN89_RS05430	COG1846	Transcriptional regulator
JQN89_RS05455	COG1113	amino acid transport
JQN89_RS05475	COG1113	amino acid transport
JQN89_RS05480	COG3547	Transposase (IS116 IS110 IS902 family)
JQN89_RS05485	COG3507	Belongs to the glycosyl hydrolase 43 family
JQN89_RS05525	COG1609	Transcriptional regulator
JQN89_RS05535	COG0588	phosphoglycerate mutase activity
JQN89_RS05545	COG0778	Nitroreductase
JQN89_RS05595	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JQN89_RS05600	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JQN89_RS05605	COG0366	Alpha amylase catalytic
JQN89_RS05615	COG0366	Alpha amylase catalytic
JQN89_RS05620	COG0395	ABC-type sugar transport system, permease component
JQN89_RS05645	COG1609	Transcriptional regulator
JQN89_RS05650	COG1609	Transcriptional regulator
JQN89_RS05655	COG0395	ABC-type sugar transport system, permease component
JQN89_RS05660	COG1175	transmembrane transport
JQN89_RS05680	COG0037	tRNA processing
JQN89_RS05680	COG0590	tRNA wobble adenosine to inosine editing
JQN89_RS05685	COG0025	NhaP-type Na H and K H
JQN89_RS05710	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JQN89_RS05725	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JQN89_RS05760	COG3842	ATPase activity
JQN89_RS05765	COG1215	transferase activity, transferring glycosyl groups
JQN89_RS05775	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JQN89_RS05800	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JQN89_RS05830	COG3583	domain protein
JQN89_RS05850	COG0617	tRNA 3'-terminal CCA addition
JQN89_RS05925	COG0592	DNA-directed DNA polymerase activity
JQN89_RS05940	COG0187	DNA topoisomerase II activity
JQN89_RS05945	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JQN89_RS05950	COG3266	domain, Protein
JQN89_RS05955	COG0542	response to heat
JQN89_RS05965	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JQN89_RS05970	COG1522	sequence-specific DNA binding
JQN89_RS05975	COG0436	Aminotransferase
JQN89_RS06075	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JQN89_RS06080	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JQN89_RS06090	COG3265	gluconokinase activity
JQN89_RS06100	COG0783	Belongs to the Dps family
JQN89_RS06105	COG1253	flavin adenine dinucleotide binding
JQN89_RS06155	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JQN89_RS06165	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JQN89_RS06180	COG0180	Tryptophanyl-tRNA synthetase
JQN89_RS06195	COG0058	SHG alpha-glucan phosphorylase activity
JQN89_RS06235	COG0515	serine threonine protein kinase
JQN89_RS06240	COG0768	penicillin binding
JQN89_RS06295	COG0071	Belongs to the small heat shock protein (HSP20) family
JQN89_RS06315	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JQN89_RS06335	COG1216	Glycosyl transferase, family 2
JQN89_RS06365	COG0343	queuine tRNA-ribosyltransferase activity
JQN89_RS06435	COG3534	alpha-L-arabinofuranosidase
JQN89_RS06470	COG0477	Major facilitator Superfamily
JQN89_RS06485	COG0366	Alpha amylase catalytic
JQN89_RS06510	COG1609	Transcriptional regulator
JQN89_RS06515	COG0395	ABC-type sugar transport system, permease component
JQN89_RS06540	COG0789	Transcriptional regulator
JQN89_RS06560	COG1028	Short-chain dehydrogenase reductase Sdr
JQN89_RS06565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JQN89_RS06570	COG0586	Pfam SNARE associated Golgi protein
JQN89_RS06650	COG0527	aspartate kinase activity
JQN89_RS06685	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JQN89_RS06700	COG1754	DNA topoisomerase type I activity
JQN89_RS06700	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JQN89_RS06715	COG2826	transposase and inactivated derivatives, IS30 family
JQN89_RS06765	COG3152	Membrane
JQN89_RS06780	COG0732	type I restriction modification DNA specificity domain
JQN89_RS06815	COG0366	Alpha amylase catalytic
JQN89_RS06820	COG3619	membrane
JQN89_RS06835	COG0672	)-iron permease
JQN89_RS06840	COG3470	protein probably involved in high-affinity Fe2 transport
JQN89_RS06855	COG0577	efflux transmembrane transporter activity
JQN89_RS06860	COG1136	(ABC) transporter
JQN89_RS06890	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JQN89_RS06895	COG0363	glucosamine-6-phosphate deaminase activity
JQN89_RS06920	COG1215	transferase activity, transferring glycosyl groups
JQN89_RS06925	COG1309	transcriptional regulator
JQN89_RS06945	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
JQN89_RS06955	COG0305	Participates in initiation and elongation during chromosome replication
JQN89_RS06960	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JQN89_RS06965	COG3442	glutamine amidotransferase
JQN89_RS06980	COG1609	Transcriptional regulator
JQN89_RS06990	COG1175	transmembrane transport
JQN89_RS06995	COG0395	ABC-type sugar transport system, permease component
JQN89_RS07015	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JQN89_RS07055	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JQN89_RS07060	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JQN89_RS07065	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JQN89_RS07075	COG1937	Protein conserved in bacteria
JQN89_RS07080	COG1322	Protein conserved in bacteria
JQN89_RS07090	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JQN89_RS07135	COG0287	Prephenate dehydrogenase
JQN89_RS07135	COG1605	Chorismate mutase
JQN89_RS07160	COG0745	RESPONSE REGULATOR receiver
JQN89_RS07175	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
JQN89_RS07205	COG0356	it plays a direct role in the translocation of protons across the membrane
JQN89_RS07240	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JQN89_RS07250	COG0545	Peptidyl-prolyl cis-trans isomerase
JQN89_RS07280	COG0251	oxidation-reduction process
JQN89_RS07315	COG3842	ATPase activity
JQN89_RS07330	COG1027	Aspartate ammonia-lyase
JQN89_RS07345	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JQN89_RS07395	COG2270	Major facilitator Superfamily
JQN89_RS07400	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JQN89_RS07400	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JQN89_RS07415	COG0742	ribosomal rna small subunit methyltransferase
JQN89_RS07425	COG0826	peptidase U32
JQN89_RS07430	COG1496	oxidoreductase activity
JQN89_RS07440	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JQN89_RS07450	COG3579	cysteine-type endopeptidase activity
JQN89_RS07455	COG3579	cysteine-type endopeptidase activity
JQN89_RS07470	COG1653	transport
JQN89_RS07475	COG1175	transmembrane transport
JQN89_RS07480	COG0395	ABC-type sugar transport system, permease component
JQN89_RS07485	COG1554	hydrolase, family 65, central catalytic
JQN89_RS07495	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JQN89_RS07500	COG3250	beta-galactosidase activity
JQN89_RS07510	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JQN89_RS07515	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JQN89_RS07520	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JQN89_RS07525	COG5002	protein histidine kinase activity
JQN89_RS07530	COG0745	RESPONSE REGULATOR receiver
JQN89_RS07555	COG1704	LemA family
JQN89_RS07570	COG1957	nucleoside hydrolase
JQN89_RS07580	COG1653	transport
JQN89_RS07585	COG1175	transmembrane transport
JQN89_RS07590	COG0395	ABC-type sugar transport system, permease component
JQN89_RS07615	COG1837	Belongs to the UPF0109 family
JQN89_RS07645	COG0505	Belongs to the CarA family
JQN89_RS07650	COG0488	(ABC) transporter
JQN89_RS07665	COG0440	acetolactate synthase activity
JQN89_RS07705	COG0667	Aldo Keto reductase
JQN89_RS07745	COG2348	transferase activity, transferring amino-acyl groups
JQN89_RS07785	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JQN89_RS07790	COG1609	Transcriptional regulator
JQN89_RS07810	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JQN89_RS07820	COG0577	efflux transmembrane transporter activity
JQN89_RS07845	COG4988	ABC transporter
JQN89_RS07850	COG2814	Major facilitator Superfamily
JQN89_RS07855	COG1653	transport
JQN89_RS07860	COG1175	transmembrane transport
JQN89_RS07865	COG0395	ABC-type sugar transport system, permease component
JQN89_RS07880	COG3867	Arabinogalactan endo-beta-1,4-galactanase
JQN89_RS07885	COG0656	L-ascorbic acid biosynthetic process
JQN89_RS07905	COG2814	Major facilitator Superfamily
JQN89_RS07910	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JQN89_RS07920	COG0489	protein tyrosine kinase activity
JQN89_RS07925	COG0438	transferase activity, transferring glycosyl groups
JQN89_RS07930	COG0438	transferase activity, transferring glycosyl groups
JQN89_RS07960	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JQN89_RS07975	COG4641	Protein conserved in bacteria
JQN89_RS07975	COG0438	transferase activity, transferring glycosyl groups
JQN89_RS08010	COG2801	Transposase and inactivated derivatives
JQN89_RS08030	COG1088	dTDP-glucose 4,6-dehydratase activity
JQN89_RS08060	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JQN89_RS08085	COG0492	ferredoxin-NADP+ reductase activity
JQN89_RS08085	COG3118	belongs to the thioredoxin family
JQN89_RS08125	COG0095	Lipoate-protein ligase
JQN89_RS08135	COG4499	WXG100 protein secretion system (Wss), protein YukC
JQN89_RS08135	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JQN89_RS08140	COG1902	pentaerythritol trinitrate reductase activity
JQN89_RS08145	COG0167	dihydroorotate dehydrogenase activity
JQN89_RS08150	COG1349	DNA-binding transcription factor activity
JQN89_RS08160	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JQN89_RS08175	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JQN89_RS08180	COG1194	a g-specific adenine glycosylase
JQN89_RS08225	COG0714	Associated with various cellular activities
JQN89_RS08265	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JQN89_RS08305	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JQN89_RS08310	COG2884	Cell division ATP-binding protein ftsE
JQN89_RS08315	COG2177	Part of the ABC transporter FtsEX involved in
JQN89_RS08320	COG3942	CHAP domain
JQN89_RS08320	COG1388	LysM domain
JQN89_RS08355	COG0564	pseudouridine synthase activity
JQN89_RS08360	COG3547	Transposase (IS116 IS110 IS902 family)
JQN89_RS08365	COG2826	transposase and inactivated derivatives, IS30 family
JQN89_RS08370	COG3550	peptidyl-serine autophosphorylation
JQN89_RS08385	COG1175	transmembrane transport
JQN89_RS08390	COG0395	ABC-type sugar transport system, permease component
JQN89_RS08400	COG1609	Transcriptional regulator
JQN89_RS08405	COG3534	alpha-L-arabinofuranosidase
JQN89_RS08410	COG1653	transport
JQN89_RS08415	COG1653	transport
JQN89_RS08430	COG0747	negative chemotaxis
JQN89_RS08435	COG0601	transmembrane transport
JQN89_RS08440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JQN89_RS08450	COG4608	Belongs to the ABC transporter superfamily
JQN89_RS08460	COG0626	cystathionine gamma-synthase activity
JQN89_RS08470	COG0514	ATP-dependent DNA helicase (RecQ)
JQN89_RS08490	COG2826	transposase and inactivated derivatives, IS30 family
JQN89_RS08500	COG0531	amino acid
JQN89_RS08505	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JQN89_RS08515	COG0358	DNA primase activity
JQN89_RS08530	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JQN89_RS08540	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JQN89_RS08555	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JQN89_RS08570	COG0577	efflux transmembrane transporter activity
JQN89_RS08570	COG1136	(ABC) transporter
JQN89_RS08580	COG0577	efflux transmembrane transporter activity
JQN89_RS08580	COG1136	(ABC) transporter
JQN89_RS08585	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JQN89_RS08595	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JQN89_RS08600	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JQN89_RS08625	COG1012	belongs to the aldehyde dehydrogenase family
JQN89_RS08655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JQN89_RS08665	COG0402	S-adenosylhomocysteine deaminase activity
JQN89_RS08670	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
JQN89_RS08675	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JQN89_RS08685	COG0667	Aldo Keto reductase
JQN89_RS08715	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JQN89_RS08745	COG0385	Bile acid
JQN89_RS08775	COG0583	DNA-binding transcription factor activity
JQN89_RS08800	COG1063	alcohol dehydrogenase
JQN89_RS08840	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JQN89_RS08860	COG0110	maltose O-acetyltransferase activity
JQN89_RS08865	COG0110	maltose O-acetyltransferase activity
JQN89_RS08875	COG3250	beta-galactosidase activity
JQN89_RS08900	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JQN89_RS08905	COG4721	ABC-type cobalt transport system, permease component
JQN89_RS08910	COG1122	ATPase activity
JQN89_RS08920	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JQN89_RS08995	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JQN89_RS09000	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JQN89_RS09045	COG0569	domain protein
JQN89_RS09050	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JQN89_RS09060	COG0497	DNA recombination
JQN89_RS09065	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JQN89_RS09075	COG1131	(ABC) transporter
JQN89_RS09090	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JQN89_RS09115	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JQN89_RS09130	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JQN89_RS09130	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JQN89_RS09145	COG0667	Aldo Keto reductase
JQN89_RS09180	COG1760	l-serine dehydratase
JQN89_RS09190	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JQN89_RS09225	COG1316	TRANSCRIPTIONal
JQN89_RS09260	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JQN89_RS09270	COG2205	protein histidine kinase activity
JQN89_RS09275	COG0745	RESPONSE REGULATOR receiver
JQN89_RS09285	COG1329	Transcriptional regulator
JQN89_RS09300	COG1121	(ABC) transporter
JQN89_RS09305	COG0803	Belongs to the bacterial solute-binding protein 9 family
JQN89_RS09315	COG0539	negative regulation of cytoplasmic translation
JQN89_RS09335	COG0469	pyruvate kinase activity
JQN89_RS09340	COG0494	nUDIX hydrolase
JQN89_RS09360	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JQN89_RS09365	COG1051	belongs to the nudix hydrolase family
JQN89_RS09400	COG3250	beta-galactosidase activity
JQN89_RS09445	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JQN89_RS09450	COG0280	phosphate acetyltransferase
JQN89_RS09450	COG0857	belongs to the CobB CobQ family
JQN89_RS09465	COG0406	alpha-ribazole phosphatase activity
JQN89_RS09470	COG0799	negative regulation of ribosome biogenesis
JQN89_RS09490	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JQN89_RS09490	COG2755	lipolytic protein G-D-S-L family
JQN89_RS09580	COG2011	ABC-type metal ion transport system permease component
JQN89_RS09585	COG1473	amidohydrolase
JQN89_RS09600	COG1882	Formate acetyltransferase
JQN89_RS09605	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JQN89_RS09665	COG1611	Belongs to the LOG family
JQN89_RS09680	COG1053	succinate dehydrogenase
JQN89_RS09685	COG0758	DNA mediated transformation
JQN89_RS09705	COG2873	o-acetylhomoserine
JQN89_RS09710	COG1136	(ABC) transporter
JQN89_RS09715	COG0577	efflux transmembrane transporter activity
JQN89_RS09715	COG1136	(ABC) transporter
JQN89_RS09720	COG2197	response regulator
JQN89_RS09735	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JQN89_RS09740	COG0012	GTP binding
JQN89_RS09815	COG2814	Major facilitator Superfamily
JQN89_RS09825	COG0515	serine threonine protein kinase
JQN89_RS09825	COG2815	serine threonine protein kinase
JQN89_RS09870	COG2233	PERMEase
JQN89_RS09875	COG0513	Belongs to the DEAD box helicase family
JQN89_RS09880	COG1309	transcriptional regulator
JQN89_RS09890	COG1966	Carbon starvation protein
JQN89_RS09900	COG0306	phosphate transporter
JQN89_RS09910	COG2197	response regulator
JQN89_RS09915	COG4585	Histidine kinase
JQN89_RS09920	COG1131	(ABC) transporter
JQN89_RS09965	COG3655	Transcriptional regulator
JQN89_RS09995	COG0577	efflux transmembrane transporter activity
JQN89_RS09995	COG1136	(ABC) transporter
JQN89_RS10005	COG2755	lipolytic protein G-D-S-L family
JQN89_RS10005	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JQN89_RS10010	COG0588	phosphoglycerate mutase activity
JQN89_RS10055	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JQN89_RS10080	COG0719	Fe-S assembly protein
JQN89_RS10085	COG0396	ATPase activity
JQN89_RS10090	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JQN89_RS10100	COG2151	metal-sulfur cluster biosynthetic enzyme
JQN89_RS10120	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JQN89_RS10125	COG0537	adenosine 5'-monophosphoramidase activity
JQN89_RS10130	COG1702	phosphate starvation-inducible protein PhoH
JQN89_RS10150	COG1022	Amp-dependent synthetase and ligase
JQN89_RS10155	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
JQN89_RS10180	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JQN89_RS10190	COG2860	membrane
JQN89_RS10215	COG1929	Belongs to the glycerate kinase type-1 family
JQN89_RS10230	COG1609	Transcriptional regulator
JQN89_RS10245	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JQN89_RS10255	COG0069	glutamate synthase activity
JQN89_RS10255	COG0067	glutamate synthase
JQN89_RS10255	COG0070	glutamate synthase
JQN89_RS10270	COG4166	transmembrane transport