LCQ52_RS11020 NONE
LCQ52_RS11025    1529 ..    1563 + -15.2  -4.90266   CTGAGAGACGAAAAA     CGGCACTTTTTGGA CTGACTT TCCGAAAAGTGCCG     TTTTTGGTTGCTCAG 100 69
LCQ52_RS11000 NONE
LCQ52_RS11030 NONE
        dnaN NONE
LCQ52_RS11035 NONE
LCQ52_RS11005 NONE
LCQ52_RS11015 NONE
LCQ52_RS00015 NONE
LCQ52_RS00020 NONE
        gyrB NONE
        gyrA   10126 ..   10140 +  -2.8  -3.01712   CTCGCATACAGCAGA               GGCT ACCGCCA AGCC               TGTTAAGGAGAAACG  43 65
LCQ52_RS00035   10756 ..   10809 + -13.4  -4.42974   ACTCTCCTCAGTGAA CCGCACC-CCGGTTGTTGGA-CTGAA GTAA TTCAGATTCGATGATCGGAGGTGCGG TTTCTTATGTGTGGG 100 59
LCQ52_RS00045 NONE
LCQ52_RS00050   15229 ..   15270 + -14.6   -3.6707   ACCTGAACCACGAAA CCTCGAGTATAAGCGTTG CAATGA CGGCGTTTATACTCGGGG  TTTCCCATATTCAGT  95 150
LCQ52_RS00065   19169 ..   19193 +  -7.2  -2.94872   GCTAGGCCGCCATTC         GGCC-TCG-TCG GCG CGAGCGATGGCC         TGCTTCTTGGCTCGC  56 54
LCQ52_RS00070 NONE
LCQ52_RS00075   20884 ..   20903 +  -7.2  -2.70932   ACGCCGTGAACAGAT            CAT-CGACG TGA CGTCGCATG            TGATTCACAGAACGG  55 61
LCQ52_RS00080   21518 ..   21554 + -16.1  -3.64198   AGAAAATGCAAGAAC    AAAAACCCTTGGAATCG GAC TGATTCCAAGGGTTTTG    TTGTGTCTGTGGAGC 100 336
LCQ52_RS00105   25903 ..   25949 + -28.9  -3.31799   AGCACCGTTCATTGC TGATGGCGGCCCGTTCGGAAC GTTAG GTTCCGGGCGGGCCGCCATCG TTGTCCGCCGTTGTG 100 86
LCQ52_RS00110   26767 ..   26777 +  -4.6  -2.62983   GCGCCGCGACCTCAA                 CCGC CGC GTGG                 TGCTGTGACGATGAC  44 7
LCQ52_RS00115   27681 ..   27693 +  -5.5  -3.05596   CAATCGGCAGCACGT                GATCG TTG CGGTC                TTGGATGAGGAAATC  49 469
        ahpC   32802 ..   32827 +  -9.7  -2.98942   TCAGTCTCACTACGA         CAG-CTCCCCTC AGA GAGGGGAGCCAG         TGTATGTAAGGGAGT  65 152
LCQ52_RS00145   34839 ..   34864 +  -3.9  -4.17048   ATCGATTGATGCGAT         CGATGC-GCCCG ACT CCGGCAGAATCG         TTGTTTTGCGGCAGC  60 101
LCQ52_RS00155   37869 ..   37905 +  -4.6  -3.62775   ACCATCTTGCAATAA    TTCTTACATGTAAGAA CTCTC TGTTAACATGTAAGAA    TTATTGCAAGATGGT  55 174
LCQ52_RS00160   39627 ..   39663 +  -4.6  -3.62775   ATCACCTTTCAATAA    TTCTTTCATGTAAGAA CTCTC TGTTTACATGTAAGAA    TTATTGCAAGATGAT  55 68
LCQ52_RS00185 NONE
LCQ52_RS00190   47139 ..   47169 + -20.6  -3.22841   TCGCATAATGCATTA       TGTGTGGGCAGATG TGT CGTCTGCCCACACA       TTCGCTGTTGTGCTT 100 42
        istB   50452 ..   50465 +  -5.2  -3.25823   TGCGGGATCCGCGCC               GGCG CAGGTC CGCC                TTCCTCTGCGCGGCC  52 124
LCQ52_RS00215   51394 ..   51421 + -15.6  -4.89852   GATGGCGCGGTAATT        CCGGGAGCAAGA CCCA TCGTGCTCCCGG         TTTTTATACATATGG 100 340
LCQ52_RS00220   52173 ..   52207 +  -3.6  -3.85817   AGTTACTGTTTTACG     ATTAGTGAAACGTTTC GAC GAAACGATTCGATAAA     TTTGTCGAACAGGGT  56 123
LCQ52_RS00225 NONE
LCQ52_RS00230   54947 ..   54960 +  -2.3  -4.29738   ATATCCGACATCGCA               CGGGA TTAT TCCGG                TTTTGCTCAGTATCA  60 57
LCQ52_RS00235 NONE
LCQ52_RS00240 NONE
LCQ52_RS00245   58152 ..   58164 +  -7.7  -4.56597   AGATCGTCGCTTCCG                TCAGC CCC GCTGA                TTTTTACCCCCGAAC  83 13
LCQ52_RS00255   60416 ..   60433 +  -2.6  -4.64676   GGTCCCGCTATTTTT             CGTACG GGGCTG CGGACG              TTTTCTTGGAGATAA  65 60
LCQ52_RS00270   63236 ..   63264 +  -9.5  -2.87132   TCGGCTTCATGCTTG        CCGGCTATCGGCC ATC GGCTGATAGCGGA        TATGTCGAAAGCGGC  65 126
LCQ52_RS00275   65109 ..   65145 +  -4.6  -3.62775   ATCACCTTTCAATAA    TTCTTTCATGTAAGAA CTCTC TGTTTACATGTAAGAA    TTATTGCAAGATGAT  55 68
LCQ52_RS00305 NONE
LCQ52_RS00310   73955 ..   73996 + -15.3  -3.07816   ATAGAGGCTAGCTAA TGAATCGGTGAGGAAGATT CCAG AGACTGCCTCACCGATTCA  TTAACTGCATACAGA  91 37
LCQ52_RS00320   75567 ..   75609 +   -15  -2.78816   TCAATCATGATTGTG ATCGCATTGCGTGGAATG ATTCAGC CATTCCACGCAATGCGCC TCTGGTAAAACGTCA  83 41
LCQ52_RS00335   81431 ..   81460 +  -8.5  -2.98823   ACCATCAGGCGAAGT       GCGTTGCGGCCGT ATTC ACGGCTGTGACGG        TCTGTATGACGCCGC  59 135
LCQ52_RS00340   83458 ..   83470 +  -3.3   -4.1899   GGAGGCCAAATCAGC                CCCTT GAA ATGGG                TTTTGAATACCGTAG  58 289
LCQ52_RS00350   86502 ..   86537 + -14.1  -3.13403   GCCGCAATACAAAAA    CGCCGTGTCAGTTGCC CAGTT GG-GGCTGACACGGCG    TCTTGCTACGAGCGG  91 144
LCQ52_RS00360   88197 ..   88226 + -17.3  -4.10612   GTCTTCTCGTAATAA       TCCCCTTGTGCTT GGTT GAGCACAAGGGGA        TTTGTGGTTATGGCT 100 47
LCQ52_RS00370   91374 ..   91421 + -25.2  -2.53876   GTGAGCGAGTTGCTA GCGTGCGGTTTTCACGAAATCA GCCT TGACTTCGTGAAAACCGTACGC TGAGTTGGAGTAAGC 100 41
LCQ52_RS00385   94107 ..   94147 +   -17  -2.98823   CTGTAAAAAAAACGA  TTGATGCCGGGTATTGCG GAACA TGCAGTGCCCGGCATCAG  TGTATGTGCGGAAAG  93 56
LCQ52_RS00400 NONE
LCQ52_RS00405 NONE
LCQ52_RS00410   99513 ..   99551 + -16.2  -3.18913   GGATAGCTCTTTATA  CAGCAAAGGGGAGGGGC GCAGAA GCCCTTCCCCTTTG-TG   TTGCGTGTATGTGTT 100 132
LCQ52_RS00455  112576 ..  112599 + -15.2  -2.87564   CATAATGTCTTCTCT          CCGCCGCCGC GGTT GCGGCCGCGG           TATGTGCCGGCGTGC  86 125
LCQ52_RS00460 NONE
LCQ52_RS00465  114845 ..  114869 +  -2.8  -3.57144   GTGACCAAGGACAAT          TCGGGCGCGT ATCAC ATGTGCTTGA          TTTGGCCGTGAACCA  49 452
LCQ52_RS00475  116033 ..  116048 +  -6.8  -3.53091   GAGGGTGGTCACGGC              GCTCGGC TCG GCCG-GC              TTTACCGGCAGCCAT  60 185
LCQ52_RS00480  116933 ..  116972 + -21.7  -3.40597   GGAAACATAGCCAAT  GC-AAATGCCGGGTAGGG ATTTA CCCTACCCGGCATTTTGC  TGTTTCAATCACCGA 100 201
        yddG  118149 ..  118161 +  -4.7  -4.07885   ACAATTTCTTCAAAC                CGCCC CAT GGGCC                TTTTACCGCCCCATG  62 134
LCQ52_RS00495 NONE
LCQ52_RS00500  122979 ..  123020 + -14.6   -3.6707   ACCTGAACTCTGAAA TCCCGAGTATGAGCGTTG CAATGA CAACGTTTGTACTCGGGG  TTTCCCGTATTCGGT  95 151
        msrB  124457 ..  124474 +  -8.4    -3.272   ATGCGCCGCGCGGAC             CGTGGC ATCGCC GCCACG              TTCGTGTCGCATAAT  62 118
LCQ52_RS00525  129785 ..  129798 +  -3.1  -3.40899   AACTCGTCCATCAAG               CCGCAC TCT GT-CGG               TTATCGTGACGCATT  47 72
LCQ52_RS00530  130546 ..  130579 + -10.4  -3.92869   GCACATATGAGAAAA    CCCCGG-AG-CGTTGG TATT CCAACGTTTTCCGGGG     TTTCTCCCTGCGTGC  83 233
LCQ52_RS00550  134670 ..  134704 + -16.5  -3.83205   TGTCGGACAAGCAAA    GGCCCGTGACAGTGAG CAAA CTC-CTGCCACGGGCC     TTTCGTATGCGCGAT 100 91
LCQ52_RS00555  137243 ..  137264 +  -3.1  -3.56836   GGGCGCCGTAGGTGG           CAGTCTATTA GAC TAA-AGGCTG           TTTGCAGCATCATTT  49 132
LCQ52_RS00560  138689 ..  138721 + -14.9  -4.53705   CGGTGCGATTGGCTT      TGCGCGCCGCG CGAAATGGTAA CGCGGCGCGCA      TTTTATGTAAAAGTT 100 352
LCQ52_RS00580 NONE
LCQ52_RS00585  145722 ..  145776 + -20.9  -3.91352   TACCTGAAGTTGATC TGCGTCGCACTGGCTTGAACCCGAAT CGAT GTTCGGGCT-AAGCCTGTGCGGCGCA TTTCGTTGCGGCTGT 100 96
LCQ52_RS00595  148853 ..  148883 +  -3.8  -3.87869   GCGCGAGCTCGCCCA       CGCCTGACGGCC CGCCCAC GCCCGTCCGGCA       TTTGTCCGGCATTCG  56 19
        htpX NONE
LCQ52_RS00605  150406 ..  150430 +  -9.9   -4.1552   ATGTTCATCTTGATC          ACGCCGTAGCT TAC AGCTTCGGCGA          TTTCTTCCGGGCGTG  81 310
LCQ52_RS00615 NONE
LCQ52_RS00620  154377 ..  154422 + -14.1  -2.53263   CTGGCTGAATTCGGC TGGACTCTGGATGTACGAATC TGCG GAATCGGACATCCAGGGTGCA TACGTTGGCGCTCCG  81 43
LCQ52_RS00625 NONE
LCQ52_RS00630 NONE
LCQ52_RS00635  157537 ..  157560 +  -9.6  -2.98491   AAAATGTGTTCTGTG          TGTCCGATTC TGGA GAATCGGTCA           TGTGTGATGTGAATT  65 188
LCQ52_RS00640  159421 ..  159452 + -21.7   -3.7108   AATGGCATGTCAGGG      GGCCGCGAACCGT CATCGT ACGGTTCGCGGCC       TTTGCATATGCGAAT 100 79
LCQ52_RS00645  161338 ..  161380 + -20.6  -3.33696   ATCAAGTGACGCGAT GGGCCGCGCGGTCCGTTC CGGAGAA GGACGGATCGCACGGCCC TTGCTTCCCGGGCCG 100 32
LCQ52_RS00650  162857 ..  162877 + -13.3  -2.91383   ATCGGCGGCCATCGT            CGTGTCGCC GAT GGTGACACG            TATCTCGCTGCGGGT  70 345
LCQ52_RS00660 NONE
LCQ52_RS00665  164948 ..  164961 +  -6.7  -2.50699   TGGGCGCGGCCAGCA               GTTCG GTGC CGAAC                ATGTATTCGTTGGGA  48 364
        gtfA  168429 ..  168465 +   -21   -4.2349   GCCATGGAAAACAAA   CCGCCCGCAGTGCACTG AAGC CAGTGCGCT-CGGGCGG    TTTTGCATGTGGCGG 100 105
LCQ52_RS00685  170504 ..  170522 + -12.4  -5.80364   GACACAATCGGCACG             GCCCTGCA TGA TGCGGGGC             TTTTTTTGTTGCGCT 100 338
LCQ52_RS00690 NONE
        ilvC  173331 ..  173360 + -18.6  -4.79752   ATTTAAGCTAGCAAA       CCGCCGTTCCCG CCCATA CGGGAGCGGCGG        TTTTGTGTTGTTGCG 100 59
        ilvC  174902 ..  174944 + -22.1  -2.76815   GTCCCCAGTGCATAC CAAAAGGCCGCCGCTCCGA TTCAT TCGGAACGGCGGCCTTTCG CTTATTCCAAGGGAT 100 149
LCQ52_RS00725  181959 ..  181979 +  -8.9  -3.05596   CTGCATGTCCATCGT            CTGGCCGGT CAC GCCGTCCAG            TTCGCTGCACGCCTC  57 403
LCQ52_RS00735  183573 ..  183599 +  -2.9  -3.53811   TCGCCGGCATCGCCA        CCGGCTCTGG CAAGTAAA CCCG-GCCGG         TTTCGGCCGAATCCG  49 9
LCQ52_RS00740  186484 ..  186496 + -10.5   -2.8082   ACCCACGCCGGCGCG                GCCGG GGA CCGGC                GTTATTGACTGGCTG  66 271
        dnaK NONE
        grpE  189926 ..  189955 + -10.7  -3.06312   GTCATCGCTGCGCGA       TGCCACCTCCCTC ATCA GAGGGAGGTGCAA        TTACATAAAGACTTT  69 194
LCQ52_RS00755 NONE
LCQ52_RS00760  191696 ..  191715 +    -5   -4.1822   GAAAAGCACGAATCT            TCTTGACG GAGA TGTCAAGG             TTTGTTACGGTGACG  65 111
LCQ52_RS00765 NONE
LCQ52_RS00770 NONE
LCQ52_RS00775 NONE
LCQ52_RS00780  196722 ..  196749 +    -9  -2.78596   CACGTCGATGGTGGG        CTGACCATGCGC TGAG GCGCAGGGGCGG         TGTGCTGACGCGCTA  60 11
LCQ52_RS00785  197598 ..  197618 +  -3.3  -2.84574   GCTGGTAGGGTATTT            GACGGTT TGCATAT AACTGTC            TGGTTCATTGGGCTG  41 103
LCQ52_RS00790  198443 ..  198472 + -12.2   -4.1899   GTCGTGAAAAATGAA       GGCCCTGACC GTGCATATGA GGTCAGGGCC        TTTTGCATGAGATGG  91 72
LCQ52_RS00795 NONE
LCQ52_RS00800 NONE
        tadB NONE
        tadC  202126 ..  202158 + -16.3  -2.70932   CACTCACACACGCAT      GGGGAAGGTGCGAAG CCA CTGCGCAGCTTCCCC      TCCTTACCGAAAGGA  90 256
LCQ52_RS00815 NONE
LCQ52_RS00820 NONE
LCQ52_RS00825  203296 ..  203307 +  -3.6  -3.65902   ACCGATACTCTGGCG                GGCT TCTG GGCC                 TTTGGCTAAGGTGAG  53 44
LCQ52_RS00830  204502 ..  204516 + -11.4  -3.85817   GAGCCGTAAAGCAAA               CAGCCC AGT GGGCTG               TTTGTAGGCGAGGGT  82 71
LCQ52_RS00840 NONE
        recR  209327 ..  209341 +  -4.3   -3.5594   CCGAAATGCGGTCCA               CTTTG TAGCC CAAAG               TTTCGCCCATGACTT  53 363
LCQ52_RS00855  210798 ..  210822 +  -7.1  -3.14229   AGGAAAAGGGTCTGG          CGATAGGCG GTGATGA CGCCCATCG          TGTTGGTGGCACTGT  54 45
LCQ52_RS00860  212405 ..  212423 +  -3.1  -4.06502   AGTTATGGGGTCTGC             GGAAACC TCGCC GGTTTGC             TTTCGTTTGCCGGTA  56 141
LCQ52_RS00865 NONE
LCQ52_RS00870  214070 ..  214095 + -17.7  -2.64803   TGCGGTATATACGAC         GAAAGCCCTCC TTGC GGAGGGCTTTC          TCAGTTTCGGACTCA  95 59
LCQ52_RS00880  216034 ..  216050 +  -2.1  -3.29511   ACAAGGTCGGCAAGG              TGGATGG CGA CCGCCCG              TTGTCGGCGCATGGG  43 59
LCQ52_RS00885  216229 ..  216244 +  -7.6  -2.73483   TAAGGGATACACGTT              CTACGA TTTC TCGTAG               TGATTCAGCTGCCGT  55 10
LCQ52_RS00890  217886 ..  217899 +  -4.5  -4.16943   TCGTATAGCAGGTTA               TCGGG CTCT TCCGA                TTTTGGCGTGTAGGG  62 110
        leuA  220220 ..  220271 + -17.6  -4.46615   GCTGAGCGCTAGCAG AGCA-AAAACAAGGCTCCCTCTGAT TGC ATCAGAGGGAGCCTTGTTGTCTGTG TTTTACTTACTACTG 100 36
         ffs NONE
LCQ52_RS00915  224293 ..  224307 +  -2.8  -2.54325   ATTCATGAGTATTAT               GACG CCAGAAA CGTC               GTGTGTTTCGCGCAA  40 103
        topA  227555 ..  227566 +  -4.4  -3.59946   CCAACGTCATTCCGC                CGTT TTGG AACG                 TTGTCTACTTGGGCA  52 155
         tmk NONE
LCQ52_RS00930  229502 ..  229555 + -15.6  -3.57651   CCCCCTCTGATTGAA CCGCACC-CCGATTGTTGGA-CTGAA GAAA TTCAGATTCGATGATCGGAGGTGCGG TTCTCTCATATGCGC 100 56
LCQ52_RS00935 NONE
LCQ52_RS00940  230924 ..  230936 +  -3.3  -2.86164   GGAGCATGTCCCTCG                CGGTC TAG GGCTG                TATCCTAATTAACAA  42 18
LCQ52_RS00945  231664 ..  231705 +  -2.9  -2.52635   GGGGCTGTCAGCATC ACTGACTGGGGGTGGGT CAGTACAA AACCACCTTCAGTCCGA  CTTCGTCGTCCAGCT  40 63
LCQ52_RS00950  233416 ..  233430 + -11.4  -4.56597   GAGCCGTTAAGAAAA               CAGCCC AGT GGGCTG               TTTTTAGGCGAAGAG  95 71
LCQ52_RS00955  235111 ..  235160 +   -16  -4.17048   GGGCTCTTCGATTGC GAAATCCGGAGTATGACCATTG AAATTG CAATGTTTATACTCCGGTTTTC TTGTTTTAAAAGCCC 100 117
LCQ52_RS00965  236511 ..  236541 + -12.7  -4.52589   AAGTAGCGTTTTGAC      GTATAAGCCCCCTC GTCA GAGGGGGCTTA-GC       TTTTGTCTCACACAC 100 35
LCQ52_RS00975 NONE
LCQ52_RS00980 NONE
LCQ52_RS00985  241000 ..  241036 + -23.3  -3.33696   ATACAGTGCCGAGAA    TGATGAAGCCCTACTCG CGT TGAGTAGGGCTTCATCA    TTGGTTGCGGGGAAC 100 63
        gltX  244383 ..  244412 + -20.1  -4.90381   TGTAAGGACACTCAA       GGTGGGCGTCTGC ATGT GCAGATGCCCACC        TTTTCTTGTATTCAG 100 70
LCQ52_RS01000 NONE
LCQ52_RS01005  245154 ..  245172 + -12.4  -5.79595   CATCCCAGCCAATGA             CCCTCGCG GAA TGCGAGGG             TTTTTTGTTTTCAGG 100 30
LCQ52_RS01010  245803 ..  245840 + -17.1    -3.745   AGCCTCACCATTGTC   GTCAAAGCCGTCTTGCG GTTG CGCAAGGCGGCTTTTGC    TATTTTGCTCAATCG 100 49
LCQ52_RS01015  252127 ..  252162 + -18.2  -4.99035   CACTCCTTATTATCT    CGGCCGGTGCCGGTCA GCAA TGCCCAGCGCCGGCCG     TTTTTGTATGAATCA 100 76
LCQ52_RS01030 NONE
LCQ52_RS01035  255999 ..  256028 +  -4.3  -2.67456   GAAAGCCATGACCCT       CAGCATGACGCACA GTG TGGGTGTCGT-CTG       CTTCTACTGGTGTGT  44 270
LCQ52_RS01040 NONE
LCQ52_RS01045 NONE
LCQ52_RS01050 NONE
LCQ52_RS01060  260744 ..  260757 +  -5.3  -3.65902   TCCCATATGCGCTGC               GGAAT CCGA ATTCC                TTTGAGTAGGATGGC  58 58
LCQ52_RS01065  264264 ..  264282 +  -6.6  -4.00124   TGGAATGAACCGTTC             CGGCTCCC GTG GGGAGGTG             TTTCCTTATGGGCTG  68 442
LCQ52_RS01070 NONE
LCQ52_RS01075 NONE
LCQ52_RS01080 NONE
LCQ52_RS01085  267296 ..  267328 +  -4.7  -3.80174   GGACCATGCGGTACA      TGAGAGAACGCCTCG AAA CGAGTCGTTCCCAAA      TTGTTGTCACCATGT  58 47
LCQ52_RS01090  268049 ..  268061 +  -5.5  -3.76224   CGTACCGGTCTTTCA                GAGTC TGC GGCTC                TTTCCTAGGTGAGGC  58 93
LCQ52_RS01110 NONE
LCQ52_RS01115  273895 ..  273914 +   -15  -3.56594   TTGACTAAGCAGAAA            GCCCCCTC GTCA GAGGGGGC             TTTACGCCGCTTTAG  95 41
LCQ52_RS01120 NONE
LCQ52_RS01125  276663 ..  276679 +  -3.6  -3.26712   TGTGGAAGGAGGGAA              CCGATG ACCAA CACCGG              TATGTTCTTCAGAAT  47 56
LCQ52_RS01130 NONE
LCQ52_RS01135  278746 ..  278770 +  -2.2  -3.05384   AGGAATACATGGCAA         GCTGA-TGG TCTCTCCC CCAGTCAGC          TTCGCTGACAGCCCC  42 69
LCQ52_RS01140  279662 ..  279672 +  -2.4  -3.28712   TGCCCACGCGCTTGA                 CGTC GAT GTCG                 TTGTCGCGCACCCAA  45 306
LCQ52_RS01160 NONE
        gndA  288538 ..  288565 + -18.6  -3.05816   GTAGCCATAGACGAA        TTAAGCCCCCTC ATCA GAGGGGGCTTAA         TTCACTCACAACTCG 100 399
LCQ52_RS01185  292456 ..  292482 +    -8  -5.95539   AGGGGGCACAACAAA         TCCTCGGAATCG CAA TGGTTCCAAGGA         TTTTTTTGTTTCGAC 100 31
LCQ52_RS01190  294283 ..  294293 +  -2.4  -4.07687   GCCGTTGCGCACGAT                 CCAG CGG CCGG                 TTTTGCCGGGCAGAT  57 150
        ftsY  297608 ..  297640 + -17.9  -3.64371   AACGCACCAAACCCA      GCCCCGAATCATATT CGA AACATGATTCGGGGC      TTTCCCGTATACGTT 100 137
LCQ52_RS01210 NONE
LCQ52_RS01215  299546 ..  299581 + -17.6  -5.42259   GACTGCATAGGAAAG    GTCCCCGCACGCCG-CG AAT TGACGCCGTGCGGGGAC    TTTTTTTGGCAATGA 100 72
LCQ52_RS01220  301414 ..  301427 +  -3.7  -2.87344   CGCGGCATGTATTCC               GCCGC CCGC GCCGC                TATGTAAACGGAATC  44 5
        dnaB NONE
LCQ52_RS01235 NONE
LCQ52_RS01240  306959 ..  306972 +  -3.8   -2.6063   CGCGCAAGGCTGCCG               CCGA ACGTCC TCGG                TGAATTCTCGGTGAG  42 9
LCQ52_RS01245 NONE
LCQ52_RS01250  309343 ..  309368 +  -3.2  -3.69809   TCGACCAAGTATCGT         GCCGCACG CCGTCCAGAA CGTGCTGC          TTGGTTTCTTCGCTA  54 140
LCQ52_RS01260  309991 ..  310003 +  -3.3  -4.13014   CCCCAGTTCCATAGA                GCGTC GAT GACGG                TTTTGAGGCTGTGGC  61 222
LCQ52_RS01270  310892 ..  310922 + -19.9  -3.39327   CTCGCCGAATAAGCA       GCACCCCGAAATC AAAAC GATTTCGGGGTGC       TTGTGCGTGTGGGCA 100 29
LCQ52_RS01275  311197 ..  311221 +  -6.5  -3.92716   TGGCCGAGTGGGGTT          GCAACCAGTTA ACT TAATTGCTTGC          TTTCGATTGTTTTCG  68 9
LCQ52_RS01280 NONE
        tnpB NONE
LCQ52_RS01290  313560 ..  313572 +  -3.3  -2.58544   CTTTGTTCAATAACA                AGCAC TAT GTGCG                ATTATGCGGCTACGA  40 28
LCQ52_RS01295  314470 ..  314496 +  -5.1  -5.52384   AGCTATACGAAAAAA         CACCGCTTG ATCAATAGC CAAGCGGCG         TTTTTTTCGTAAGGA 100 45
        rpsF  316613 ..  316628 +  -5.4  -3.04461   GAATCAAGCGTTTAG              TCAGCT GAAC AGCTGG               TATTCAAGGTAAGTA  50 39
LCQ52_RS01315  317294 ..  317306 +  -5.5  -3.43264   TTTCGGCGGCGACGA                TTCCG ACC CGGAG                TTCTGATCAGTACTT  53 7
        rpsR  317604 ..  317618 +  -5.6  -2.52543   GCCCTGCTGCCGTAC               GCCACC TCG GGTCGC               TGAGTTAGGGAGGCT  46 8
        rplI  318144 ..  318173 + -17.9   -5.0916   TGAGCTTAAGCATCA       TCCCCCGTGCGGT TTGC GCCGCATGGGGGA        TTTTTGTATTAGCAA 100 82
LCQ52_RS01330  318361 ..  318394 + -13.3  -5.07567   ATCCCTGCGGGGGCA     CAGACAACCGGAATC GAAA GATTCCGGTTTTTTG      TTTTTTCCAGTATCA 100 25
LCQ52_RS01335 NONE
        ptsP  320565 ..  320576 +  -5.8  -3.59979   AATCGCGTCGCCGGC                TCCG CGAA CGGA                 TTTCCAGTCACACAG  57 177
LCQ52_RS01345  321408 ..  321436 + -18.9  -3.52652   ATTCATATATGCAAA        TGGCCTCCGCTCG TTT TGGGCGGAGGCCA        TTGTCGTTGAATCAG 100 52
LCQ52_RS01355  324510 ..  324528 +  -8.9  -4.17023   GCGGCCATTGCGCGT             CTCGTCA AATCG TGACGAG             TTTTACCGTCATTCA  80 11
        rmuC NONE
LCQ52_RS01365 NONE
LCQ52_RS01370  327576 ..  327594 +  -5.2  -2.82516   CATGCGCCGACAATC             CTGCCG CATGGAT CGGCGG             TCTCATCGTCACCAG  47 42
        gatC NONE
        gatA NONE
        gatB  331254 ..  331273 +  -9.2  -4.38203   TCAAATCCGTTAGAC            AGCTCCCG CCAG CGGGAGCC             TTTATTGATTCTGTA  85 184
LCQ52_RS01390 NONE
LCQ52_RS01395  332811 ..  332855 + -15.7  -3.14344   TACAGCCTGTATTGA CAATGCGCGGCATTCCGTCAT CTT ACGGCGGGGCGTCGCGCATTG TTCATACAACGCATA  93 56
LCQ52_RS01400  334879 ..  334927 +   -14  -2.87463   AATACCCCTACCTCA CGATTCGATGCGTCGCCTTTCTG CTGA TGGAAAGACGGCGCATCGG-TCG TATATCGGGAGAATT  86 97
LCQ52_RS01405  336655 ..  336674 +  -9.3  -5.79588   ATAAACCTTGTTGAG            CTCCCTC GTCACA GAGGGAG             TTTTTTTGGTTTTCG 100 41
         rho  338936 ..  338974 +   -19  -2.71268   CGCTGAACAATAGTG   TAAGGGCTGCACCCTG ATTGATA CGGGGTGCAGCCCTTG   TCGTATCTGATGCAA 100 47
LCQ52_RS01415  339660 ..  339674 +  -3.5  -2.56596   TCGTCTATAGGGCAA               GTTGC CTGCA GCGAC               TACATTAATACGGGA  42 74
LCQ52_RS01420  341841 ..  341898 +   -20  -3.35798   CGCGTAAAGTGCGTT ATCGGTGTGGGACGCCGCATCAAAAA CTGGCT TTTTCGATGCGGCGTCCCACACCCTC TTGTAAGTCAGAGCT 100 82
LCQ52_RS01465  355325 ..  355378 + -17.5  -3.34192   CTTCTGAGCAGAAGG ACGGGAGCTGGGCACGAAGTCGATTG TGA CATACGACTT-GTGCCCGGCTTCCGC TTCGTTGAGAAACTT 100 93
LCQ52_RS11040  355737 ..  355775 + -16.8  -4.39386   GCCTGACATAACAAA  GCCCCCGAACC-TACCG CACTCA CGGTATGGCTCGGGGGC   TTTTCGTCGTTTAAG 100 35
LCQ52_RS01485  358352 ..  358366 +  -4.2  -4.38712   CGGCTCTCCACACGT               ACACGT CGA ACGTGG               TTTTGTCCACGTACA  68 150
LCQ52_RS01515  361332 ..  361343 +  -5.8  -3.53761   CTCGATGGTCGAACG                CTGG TCCA CCAG                 TTTCAACGCGGCTTC  55 503
LCQ52_RS01620  375173 ..  375204 +  -6.7  -3.90588   TCGATTCAGATTCTG     GCGATGCTTGCC-CA TGTA TGCGGCGAG-ATCGC      TTTGCTTCAGCCCTC  65 263
LCQ52_RS01630 NONE
LCQ52_RS01635 NONE
LCQ52_RS01640  376929 ..  376943 +  -2.7  -4.21773   TTGATTCTTCCTTTC               CCCGC ATGCA GCGGA               TTGTTTGTGTTGCAG  58 431
LCQ52_RS01645 NONE
LCQ52_RS01650 NONE
LCQ52_RS01655  378279 ..  378292 +  -3.7  -2.61274   ATTTAAGGCTTGCCC               GCCGC CATT GCGAC                CTTCCTTCCGATGCG  42 35
LCQ52_RS01660 NONE
LCQ52_RS01665 NONE
LCQ52_RS01670  379858 ..  379871 +  -3.7  -2.57132   ATGTTCGCCGCCGAC               ACCGG CGAC CCGGA                ATTCTAGAAAGGACA  42 5
LCQ52_RS01675  380660 ..  380672 +  -4.7  -3.00994   TATCGCATGTCGTGA                AGGCG GCG CGCCA                TGTCTGTGAACTTCG  47 356
LCQ52_RS01685 NONE
LCQ52_RS01690 NONE
LCQ52_RS01695 NONE
LCQ52_RS01700 NONE
LCQ52_RS01705 NONE
LCQ52_RS01710 NONE
LCQ52_RS01715 NONE
LCQ52_RS01720 NONE
LCQ52_RS01725 NONE
LCQ52_RS01730 NONE
LCQ52_RS01735 NONE
LCQ52_RS01740 NONE
LCQ52_RS01745 NONE
LCQ52_RS01750 NONE
        tnpB NONE
LCQ52_RS01760 NONE
LCQ52_RS01765  388838 ..  388859 + -10.1  -5.58454   CGGAGTATCGGAAAA           GCCTGTCCC ATCG GGGATGGGC            TTTTTTTCGTATCCG 100 78
LCQ52_RS01770  389042 ..  389056 +  -2.7  -4.11363   AACCACCACAGACAG               ACGCC TCGCC GGCGG               TTCTTTCCTCTTCTT  58 86
LCQ52_RS01775  389498 ..  389538 +  -4.6  -5.03145   ACCCCACCCGGCCCC G-CCGGGGCGACCACGG-GC AAA GCGCCGTTTTTCCCCCGGGC TTTTTTCCACACTTG  80 41
LCQ52_RS01780 NONE
LCQ52_RS01785 NONE
LCQ52_RS01790 NONE
LCQ52_RS01795  394129 ..  394146 +  -8.3  -5.14563   TCTAACAGATTTTCA             GCCACCC GCAC GGGCGGC              TTTTTTAATGCCCGG 100 75
LCQ52_RS01800 NONE
LCQ52_RS01805 NONE
LCQ52_RS01810 NONE
LCQ52_RS01815 NONE
LCQ52_RS01820 NONE
LCQ52_RS01825 NONE
LCQ52_RS01830 NONE
LCQ52_RS01835 NONE
LCQ52_RS01840 NONE
LCQ52_RS01845 NONE
LCQ52_RS01850 NONE
LCQ52_RS01855 NONE
LCQ52_RS01860 NONE
LCQ52_RS01865 NONE
LCQ52_RS01870 NONE
LCQ52_RS01875 NONE
LCQ52_RS01880  408857 ..  408908 +  -9.2  -4.26189   TAGCCGCAGTGCGAT GGGGGTGAAGCGCAGCGAGGGGGC GAAA GCCCCCTCATGACGTTTCGCAGCC TTTTGGGATTTGTGG  84 38
LCQ52_RS01885 NONE
LCQ52_RS01890 NONE
LCQ52_RS11055 NONE
LCQ52_RS01895  411098 ..  411128 + -18.3  -3.83026   GCCCCCAAGAAGGTT       TAGCCCTCGCCGG ACATC CCGGCGGGGGCTG       TTTCATATGCCCACC 100 23
LCQ52_RS01900  412423 ..  412453 +  -7.6  -2.53263   CCCGAACCCAACCTG      GGAATCCTGCACC TTGGCC GG-GCGGGGTTCC       TAGGTTCCAAATCAC  53 52
LCQ52_RS01905  412757 ..  412795 + -16.8  -4.39386   GCCTGACATAACAAA  GCCCCCGAACC-TACCG CACTCA CGGTATGGCTCGGGGGC   TTTTCGTCGTTTAAG 100 35
        metA  415684 ..  415702 + -11.7  -3.05266   TCGCCTACGACGACA             GCTCCCC TCGAC GGGGAGC             TCCTTTGCTTCTCCT  76 60
        atpB NONE
        atpE NONE
LCQ52_RS01945 NONE
LCQ52_RS01950 NONE
        atpA NONE
LCQ52_RS01960 NONE
        atpD NONE
LCQ52_RS01970  423128 ..  423155 + -21.4  -4.41353   GAACCAACTCCTTAA        GGGGCTCTCTGG TTTT CCAGAGAGCCCC         TTTTGCTATGTATGC 100 44
LCQ52_RS01975  424616 ..  424635 +  -4.2  -3.68351   TGTCCGCAGCCCCTA            GTGCCCGA AAGG TTGCGCAC             TTTGGATCATGGCCG  55 56
        nucS  426771 ..  426814 + -32.8  -4.25104   TCTCAGGCTGTTCTA GATATAGCAGGGGCTCCCTC ATCA GAGGGAGCCCCTGCTATATC TTTTAGTACGCGGCG 100 25
LCQ52_RS01995 NONE
LCQ52_RS02000  430150 ..  430167 +    -2  -3.29511   CATTACAATCAATGT             CAGCAA ATGTGA TTGTTG              TTGTACGCGAATCGC  43 223
LCQ52_RS02005  431187 ..  431205 +  -8.8  -2.83164   CTAAGTGGTTTTGGT             TCCCCTCT TTG AGAGGGGC             TGTCGTCGTAGATGA  60 37
LCQ52_RS02020  433469 ..  433493 + -13.6  -4.28254   CAAGCCCACCAGCAT          GGCTTTCGGC TAACC GCCGGAAGCC          TTTTGCATATTCGGC 100 30
LCQ52_RS02025  434230 ..  434280 + -29.8  -3.29461   AGTGATTCGAACGTT TTCCCGGCGGCCCGTCTGCGCGCA TGG TGTGTGCAGACGGGCCGCCGCGTA TTGTGCGACACGTTC 100 36
LCQ52_RS02030 NONE
LCQ52_RS02035  436375 ..  436393 + -11.8  -3.35798   TAACGAGAGAAGCGA             CGTATACG TGG CGTATACG             TTGTACGTGCAAAGT  80 38
LCQ52_RS02040  437744 ..  437770 + -20.2  -3.03124   TGAGGTAAGTGTGGT         GCGGAATCGGCC GCA GGCCGGTTCCGC         TATTGACACATCGCC 100 33
LCQ52_RS02045 NONE
LCQ52_RS02050 NONE
LCQ52_RS02055 NONE
LCQ52_RS02060  442327 ..  442380 +  -6.8  -3.03124   CTTATCGGCAATGAT GTG-TGTGGGACGGCG-GCGATTTTT GGGC GATTATCGCGTGCCGTCCCACAGCAA TCTTGCAGAGTAGGG  54 102
LCQ52_RS02070  445164 ..  445180 +  -5.1  -3.90588   GGCTGACCCTCCAGC              GCCAC GTCGGCG GTGGC              TTTGGTTACGCGGTC  60 252
LCQ52_RS02100  450768 ..  450779 +  -5.8  -2.86164   GTTCGAGTCCCGTTG                TCCG CTCT CGGA                 TGGTTGATTCATGCT  51 18
LCQ52_RS02105  450904 ..  450921 +  -9.1  -5.14563   CCACTCGATGAATCG             CCGGCAG AATG TTGCCGG              TTTTTTCATCACAGG 100 35
LCQ52_RS02110  451024 ..  451050 + -12.3   -5.1861   CCCACCCGAGATTCA        CGCTCGTTGGCC ATGT GGCC-GCGAGCG         TTTTTTCATAATCGA 100 35
        rpmB  455145 ..  455179 +  -8.7  -4.06687   CGTACTAACGTGGAG    CAAAACCCGTTTGAGC TTCG GCTTGG-CGGGTTTTG     TTGTTTCTGCGGCCT  76 45
LCQ52_RS02135  458200 ..  458246 +  -9.5  -4.01047   AAGACCATTCGTACA TGAGGTACTCGAAGTGCAT ATATCATTG GTGCGCTTCGAGCACCCCA TTGTTGTTCATGATT  80 157
        rsmD  458915 ..  458925 +  -6.8  -2.56596   CGCGTAGTGAATCTC                 CCAC CGT GTGG                 TGAATTAATCGGCGA  51 34
LCQ52_RS02150 NONE
LCQ52_RS02155 NONE
LCQ52_RS02160  463476 ..  463486 +  -3.2  -2.61582   CCGGCCAGATGCATC                 GCTA GAC TGGC                 ATTATGCGTGAACTC  40 21
LCQ52_RS02165  464313 ..  464325 +  -3.4  -3.58522   GAAAGGAATAAACAG                CGAT GGTGG ATCG                TTTCCCGGTGGTGCT  49 171
LCQ52_RS02170  465926 ..  465958 + -17.2  -3.55866   ACTAGCGGTAAGAAT     TACGGCACCTGCGCT TTCG AGC-CAGGTGCCGTA      TTCGTTTGAATCTGC 100 59
LCQ52_RS02175  467363 ..  467392 +  -4.1   -4.3739   TGACTTCGTCAGCCT       CCCGGAATCGGCC TGAC GGCCAATGCTGTG        TTTTCTCGCAGCCTG  64 38
LCQ52_RS02180  468793 ..  468819 + -15.3  -5.03314   TTGTCTTTGTAAAAA         TGCTCACTGAG ACCCA CTCAGTGAGCA         TTTTTTGCCAATAAC 100 43
LCQ52_RS02185 NONE
        mtnN  471110 ..  471129 + -13.6  -4.85918   GAGCTCCCCATATTA            TGCTCCCG CCAG CGGGAGCA             TTTTGTTATGTCGTC 100 164
LCQ52_RS02195  472640 ..  472653 +  -2.4  -2.71712   CGCGCGTAGCCCAAT               TACG CAATTA CGTA                CTTTCGGGAAACAGC  39 112
LCQ52_RS02200  473463 ..  473480 + -10.5  -5.88565   GCGGAGTAAATGGAA             GGCGGCC TTCG GGTCGCC              TTTTTTTGTTGTGGA 100 32
        pstS NONE
        pstC NONE
        pstA NONE
        pstB  477883 ..  477900 + -14.1  -3.66803   AGGAGAAACGGCAAA             GCCCGCC GCAA GGCGGGC              TTTCGCATATTCAGC  95 75
LCQ52_RS02225  478714 ..  478746 +   -14  -3.41024   AGTTCTGACCCGCTT      CAGGCCCGTCCGGT AAGCC GCCGGCCGGGCCCG      TATTGTCTTAAGAGA  95 33
LCQ52_RS02230  481067 ..  481079 +  -4.7  -2.96979   TGCTTACGCTGGAAT                CGGAC ACA GACCG                TCTCATTACTGTTGA  46 52
LCQ52_RS02235  481977 ..  482000 + -16.8  -3.08679   TCGGCTGAACTTTCT          CAGCTCCCCT TGTC AGGGGAGCTG           TCTTGCGTAGCGAGA 100 33
LCQ52_RS02240  483140 ..  483184 + -15.7  -4.07568   ACGGCGGCCGTCCGG TCCGCTCCACGCCGTGGAT GGATATG ACCCACGGCGTGGAGCGCC TTTTCGGGAACCGAC 100 46
LCQ52_RS02245  484978 ..  485009 +  -4.3  -3.55444   CGAGCATATCTTCTG      CGTCGTCGACCTC GCCGTA GAGTTCGACACCG       TTTAGGGCCTCGGCG  53 421
LCQ52_RS02265  487078 ..  487093 +  -2.4  -3.04144   GCAGACGAAGGAGTT              CCGGTG AGCG CGCAGG               TGTTCAAGCTCAGGA  42 19
        pabB  488610 ..  488642 + -20.1  -4.43012   TTATGCTTCGTCATA      CGCCCTGAAATGATG CCA TATCATTTCAGGGCG      TTTTCGTGTTCGCAT 100 160
        ribD NONE
LCQ52_RS02280  490413 ..  490423 +  -8.2  -3.28924   CGCAGGATCTGCTGT                 CCCG GTG CGGG                 TTCTGAGAAAGGATG  62 9
LCQ52_RS02285 NONE
        ribE  492354 ..  492384 +  -4.6   -3.1364   AGCCAGCGCGGGAAG       GTGAGGTTCGGGCC GGC GGCTTGAATCAGAC       TTGCGTCCTTGAATC  48 259
LCQ52_RS02305  496674 ..  496684 +  -5.4  -3.14132   TTGCACCAGACACAT                 TGAC ATC GTCA                 TTCATGGCGGCCACG  48 436
LCQ52_RS02315  498886 ..  498911 +  -3.2  -2.57244   ACAAATAACGTTTGC         GGGCCGCCGCT GGGCA AGCG-TGGCGC         TACATTGGTGAGTCA  40 33
LCQ52_RS02320  501508 ..  501533 +  -5.3  -3.01712   GTATCTGTGTACTTT         CGTCGTTTGCC TTCA GGCATGCGACA          TATTCCGGCCAACAA  47 331
LCQ52_RS02370  508873 ..  508895 + -14.9  -3.65046   TCATCTCGGCCAGCG           TCTGGCCGC GTTCG GCGGCCAGA           TTGTTCAGGTCCACA  85 234
LCQ52_RS02380  510398 ..  510416 +  -6.6  -2.88544   GCACTAAGACCAATG             CGCGTCGA TCG TGGGCGCG             TCTATCCGAGTAAGG  53 105
LCQ52_RS02390  512589 ..  512604 +  -7.6  -3.84825   CCTACGGAGACTCAG              GTTCTC TGAC GAGAAC               TTTCGTCTCCATAGG  68 17
LCQ52_RS02400 NONE
         rph  516671 ..  516690 + -13.6  -2.76696   CCCTAGACTAAGCCA            GCTCCCCT GACA AGGGGAGC             CTTCTTAAAGGAGAA  79 30
LCQ52_RS02410  517595 ..  517623 + -18.2  -3.14132   AAGGGCGATACGAAA        GAAGGCCGGCGC TTAGT GCGTCGGCCTTC        TTGATGAACAAGAGC 100 152
LCQ52_RS02420 NONE
LCQ52_RS02425 NONE
LCQ52_RS02430  521958 ..  521973 +  -2.5  -3.72576   ACCGTGCACCCGCCG              TGTGC CTACTT GCGCA               TTTGCTCACACGCCC  50 86
         pgi  525484 ..  525499 +  -7.6  -4.42653   GCGACTGCCCACGTC              GCGAAT TCTG ATTCGC               TTTTCTAGCTCCCCT  79 107
        rplS  526461 ..  526489 + -21.1  -3.85184   ATAAACCGTGAAATT        CAGCCCGGAACCG TTT CGGTTTCGGGCTG        TTTCCGTATTTTCCA 100 87
        lepB NONE
LCQ52_RS02465 NONE
LCQ52_RS02470  529654 ..  529665 +    -3  -4.15235   TGTGTCGAATGCAGG                TTGT CGGT ACAA                 TGTTTTTTGGAAATT  58 87
LCQ52_RS02475  531404 ..  531423 + -13.6  -2.78738   AGTAAGCCTTTCTGA            CCTCCCTC TATT GAGGGAGG             TCCTTGAGATTTTGA  79 36
LCQ52_RS02480  532260 ..  532282 +  -3.2  -2.76322   ACACACACATCAAAT           CAGCGCTGAC TCC GCCAGCACGG           TGATGTCTTGGCTCC  41 116
        araA  534061 ..  534100 + -15.8  -3.79113   CTGACTGCTACCGCT  GAAAAAGGGCTGTTCCGG GAAA CCGGAGCAGCCCCTTTTG   TTGTTATCGGCAACT 100 166
LCQ52_RS02495  536759 ..  536781 +  -4.1  -4.07568   CGCGGCTAACTAATC           GGCGAAACG CGGCA TGTTTCGCA           TTTTGGGCGAAAAGC  60 114
LCQ52_RS02500 NONE
LCQ52_RS02505 NONE
LCQ52_RS02510  540318 ..  540328 +  -3.2   -3.8512   CCACTTTCAGCGACG                 GTGT CAG GCAC                 TTGTTCTCCTGCGTG  56 289
LCQ52_RS02520  547013 ..  547028 +  -5.4  -3.14931   CATTGCGTTACGTTA              CCGC-GT TGC ACTGCGG              TTCCTCGCGGGTGGC  50 70
LCQ52_RS02530  549828 ..  549853 + -13.3  -3.60627   GCCCGATCTCCCAAA         GCGGGGATGCT CCCC AGTGTCCCCGC          TTTCCCGTGCCCTCG  89 122
LCQ52_RS02535 NONE
LCQ52_RS02540  552026 ..  552047 +  -7.9  -3.02511   TCGCTGACAGCCCCG           CCAGCGGGG GCGG CCTCTCTGG            TGTTCACAACCTGCA  57 129
LCQ52_RS02545 NONE
LCQ52_RS02550  555480 ..  555498 +  -5.9   -3.4489   CATGAGGAAAGGAAG             CGCCAAG CATCA CTGGGCG             TTCGTTCTGAGCGTT  56 165
LCQ52_RS02555  558628 ..  558675 + -19.4  -3.14132   ACCGGGACAACGATT TCTGTCCCGGTAGAAACGTCAA TCGA TTGACGTTTTCACCGGGACAAA TTCGTGCCCGGGAAC 100 424
LCQ52_RS02560  559721 ..  559734 +  -2.4   -3.1505   ACGACCCCCTCACCT               TCAC CTATGC GTGA                TTGATGGCACGTCGT  42 12
LCQ52_RS02565  560753 ..  560763 +  -2.4  -5.32882   AAATCCTGTTCCAGT                 GTGG AAT CCTC                 TTTTTTGTAGTAGTA  84 297
LCQ52_RS02575  563547 ..  563587 + -19.3  -3.05268   TGCGATAGCACAACA  TAATAAGAAGCCCCGGTGT TGG AAACCGGGGTTTCTTATTA  TGTTGAGAATGGTTG 100 60
LCQ52_RS02585 NONE
LCQ52_RS11060  567259 ..  567283 + -17.2   -3.3506   GGAGAGACAAAAGAA          GGGCGTCAGC AAGAA GCTGACGCCC          TTCTCAACATTTCAA 100 76
LCQ52_RS02605  569903 ..  569919 +  -5.1  -3.08283   CGGTCTGACATCAAG              CTGACGT AAG ACGTAAG              TATTCACGTCATTCT  50 33
LCQ52_RS02610 NONE
LCQ52_RS02615 NONE
LCQ52_RS02620  573675 ..  573701 +    -3  -4.08189   AAAATTTAATGTATT         GATGAACATG ATTCTGA CGAGTTCATC         TCTTTTGTTTCCATT  58 100
LCQ52_RS02625 NONE
LCQ52_RS02630 NONE
LCQ52_RS02635 NONE
LCQ52_RS02640 NONE
LCQ52_RS02645  579786 ..  579801 +  -5.4  -3.95435   GCCGCATCGGCGGGC              TGCTTG CCGT CGAGCA               TTGTGTTTTAGCAAG  60 509
        istA NONE
        istB  583564 ..  583580 +  -7.2  -3.53012   GGGCGGATCGAGCTT              TCCCGC CACGC GCGGGG              TTTGACCGCGAGCCG  62 290
        rfbB NONE
LCQ52_RS02695 NONE
        rfbA  590987 ..  590999 +  -4.7  -3.21099   TTATTCTGCCTTTTT                GCGGC CGC GGCGC                TTCATGGTGCCAGCG  49 224
LCQ52_RS02710  593179 ..  593204 + -16.9  -3.97088   GTCTTGCAATATGAA         CCGTGCGGTAC TTCT GTGCCGCACGG          TTTACTGTTATAAGA 100 61
LCQ52_RS02715  595037 ..  595072 +  -8.9   -3.5518   GCTCGGCGTTTGGGC    CGGGTTTCGCTCAGC CTTCTT GCGGCGCGGAACCTG     TTGTGTACGTGTTGA  68 312
LCQ52_RS02735  597442 ..  597455 +  -2.3  -2.50508   GCAGGCGTTGGCCTG               GGCAG GAAT CTGAC                AGTTGTTTTGCTTCC  38 13
LCQ52_RS02740 NONE
        nudC NONE
        gcvH NONE
LCQ52_RS02755  601537 ..  601547 +  -4.6  -2.80113   ATGCGTCCCCGGTGC                 GGTG CCT CGCC                 TATAATCGCGTGGTA  45 62
LCQ52_RS02760 NONE
LCQ52_RS02765 NONE
LCQ52_RS02770  606389 ..  606399 +  -2.4  -4.59773   CGAGCGCGGTAACCG                 CGAC AGT GCCG                 TTTTTCGCGGTAACG  65 97
LCQ52_RS02775  607280 ..  607298 +  -4.5  -3.07043   CGCGGCGCTGACCGT             TCGGCTG ACTTC CAGCCAA             TGTTACGCTAGTGCG  47 30
LCQ52_RS02780  609783 ..  609811 + -21.1  -4.17023   AAATTACGTAGTTTG        CGGGCGTTACCTG TTT CAGGTGACGCCCG        TTTTACAATACTTAA 100 114
LCQ52_RS02785  611360 ..  611389 +  -5.7  -4.07885   AAATTTGGCTAACCG       CCC-CATGGGAC AATCACC GCCCCATGAGGG       TTTTACCGCCCCATG  67 126
LCQ52_RS02795 NONE
        galT NONE
        galK  616370 ..  616409 + -15.8  -5.46657   GATTGTTTTGAAAAT  CGCATGGCGTCTGCCG AAATCACA TGGCAGACACCATGCG   TTTTTTATTGCCGTC 100 137
LCQ52_RS02810  618402 ..  618413 +  -2.2  -3.09878   AGTGGCTGACGGGCT                CGTA CAGG TGCG                 TCTTACATCGGTACG  42 394
LCQ52_RS02815  620125 ..  620135 +  -2.4  -3.65554   CTCCCGTGACTGCCG                 CCGG ACC CCGC                 ATTTTTGTTCCCTAG  50 81
LCQ52_RS02820 NONE
LCQ52_RS02825 NONE
LCQ52_RS02830 NONE
LCQ52_RS02835  623934 ..  623944 +  -5.4  -2.78463   CCGCATCATCGAACG                 CGAT TCC ATCG                 TGTCGTGACGGACGT  47 7
LCQ52_RS02840  626030 ..  626051 + -12.3  -3.16267   GCAAAACAGACGAAA           GGCACGTGT TTTG GCACGTGCC            TTCCCTATACTTGAG  78 94
LCQ52_RS02845  626445 ..  626455 +  -8.2  -3.59979   GCGAGGAGGCGGAAA                 GCCC GGT GGGC                 TTTCCGCTGACGGAG  65 68
LCQ52_RS02850  627978 ..  628029 + -21.8  -2.90496   GGGGTACCTCAATCA AGAAACCCCGAGTACAAGCGTTGA TATT TCAACGCCTATACTCGGGGTTTCG TCCTTTAACAGCCCC 100 101
LCQ52_RS02865 NONE
LCQ52_RS02870  632049 ..  632072 +  -3.9  -3.17901   GAAGAGCGATCCGGT          GACGTTTAC GGTGCA GTAAAAGTC           TTGCCTTAGCGCTAT  47 7
LCQ52_RS02875 NONE
LCQ52_RS02880  640051 ..  640085 + -18.7  -2.56011   GTGTTAATCGCAATA     AGATGGCCCGGAACT ATATC AGTTCCGGGCCATCC     GTATATTTGCCATTG 100 86
LCQ52_RS02925 NONE
LCQ52_RS02930  663531 ..  663557 +  -3.7  -2.60075   ACTGGCCACGTACCG        GTC-CGCGGT-TG AAA CGCGCCGCGTGAC        GTTGCTTGGGAACCG  42 131
LCQ52_RS02935  665104 ..  665114 +  -8.2  -4.65747   GCCCTCACCTAAAAA                 CGCC TCC GGCG                 TTTTCTTCACGGTTC  87 172
        dapB NONE
        dapA NONE
LCQ52_RS02950 NONE
        pepN  671714 ..  671761 + -15.4  -2.52464   CTGATTTCCTTCTGG CTCCCCTCGGGCGCGAGGGGAG CTGT CGCCTCAGGCGACTGAGGGGAG TCGCTTCCGCGAGAA  83 37
LCQ52_RS02960  672845 ..  672857 +  -4.8  -2.73124   GACCCCGATAAGGTG                GCCA ATGTC TGGC                ATTTGGCGACTGCGG  45 103
LCQ52_RS02965 NONE
LCQ52_RS02970  673644 ..  673654 +  -5.4  -3.07575   ATGCTGATTTCCGGT                 TCTG GAG CAGA                 TTCCGTGGCGGTTTT  50 116
        glmM NONE
LCQ52_RS02980 NONE
LCQ52_RS02985 NONE
LCQ52_RS11070  677393 ..  677411 +  -7.3  -2.80236   CGGCTCCCTGGTCAT             CCCGGCG ATTTA CGCGGGG             CTTTGACGTTGCCTT  55 1
        prfB NONE
        ftsE NONE
        ftsX  680947 ..  680967 +  -6.1  -3.33348   TGTGATGACATCGTG            TGCAAGCCT CTC AGGTTCGCA            TGTTATGGTATTGGC  56 65
LCQ52_RS03005  682403 ..  682425 + -16.4   -4.4261   ATATATGCGGTTGAA           GGGTTCCTCT TGA AGAGGAACCC           TTTTCGTATTCGAGG 100 57
        smpB  683041 ..  683058 +  -2.7  -3.53761   GAGCCAAGAGTAGGA             T-GTCCAC GTT GTGGGCCA             TTTCGCCCACGATTA  49 69
LCQ52_RS03015  684130 ..  684156 + -16.6  -5.08178   TTCGGTTACTATGAA         GACTCCCGTTGC CCT GCGGCGGGAGTC         TTTTTGTATATGTAT 100 42
LCQ52_RS03020  685215 ..  685246 + -12.4  -3.16683   TCGCGAAAATTCGAA      TGGGGCGCACTGTTT GTA ACACAGT-CGCCCCA      TTCGTGCACTAAGGT  78 52
LCQ52_RS03025 NONE
LCQ52_RS03030  687277 ..  687303 + -16.7  -4.07568   GTTGCAGCTCCAAAA         GCGTACGCTGA TGAAC TCAGCGTACGC         TTTTCACGAAGGGGC 100 154
        glmS  689272 ..  689292 +  -2.4  -3.00298   TCGCCAAGTCCGTGA            CCGTTGAG TAAGC CACATCGG            TATGTGATTGACGAG  40 15
LCQ52_RS03040  690091 ..  690101 +  -5.4  -3.18681   GAGTGTTTTCGCTCA                 TGGT GTC ACCA                 TTCATAGAGTTCGGC  52 56
LCQ52_RS03055 NONE
LCQ52_RS03060  693718 ..  693732 + -11.4  -4.15044   GAGCCGTTAGGCAAA               CAGCCC TGT GGGCTG               TTTATTCCCGCGGAC  88 170
LCQ52_RS03065  695891 ..  695925 + -16.5  -4.39166   CGCCTAATTACCCAA     CGGCTCCCTTGCTGC TCATC GTAGCAGGGGAGTCG     TTTTCGTATCTCCAG 100 53
LCQ52_RS03070  697033 ..  697076 +   -14  -3.09968   AATATCCGAAGTGAA TGACAAG-GCCCGTCAATCGT ATG GTGATTGACGGGCCCTGGTCG TATTGGACTTGACTG  91 57
LCQ52_RS03080  700419 ..  700442 + -12.4  -4.78237   GTTGCGATAACAGGA          TCGGGCACTC TTCG GAGCGCCCGA           TTTTCTTATGCCATG 100 85
LCQ52_RS03085  702085 ..  702111 + -13.7  -4.28049   CACCTGATACACAAA         GCCCCGTGACG AATCC CGTCACCGGGC         TTTTACCGTTTTAAG 100 76
LCQ52_RS03090  703593 ..  703615 + -10.5  -3.19463   GGGGTTGGGGCGGAA           TCGACCGCG CTATA CGCGGCCGA           TTCCTGCATACTACG  71 47
LCQ52_RS03100  706157 ..  706187 + -20.6  -3.15544   AGTAGTTCGTTACAG       CAATGAGCTCCCTC AGT GAGGGGGCTCATTG       TTAATCCAAGTAAAG 100 36
LCQ52_RS03105 NONE
LCQ52_RS03110 NONE
LCQ52_RS03115 NONE
LCQ52_RS03120  709635 ..  709647 +  -9.1  -3.37589   CACCCGTCAGCTCAT                CGAGG CAG CCTCG                TTATAGACCTTTTTG  66 7
LCQ52_RS03125 NONE
LCQ52_RS03130  712565 ..  712588 +   -16  -4.32482   GGTACCTACAAAAAA          TCCCCGGCCC ACAA GGGTCGGGGA           TTTTCCGTTATCGAT 100 111
        recQ NONE
LCQ52_RS03145  717088 ..  717116 +  -8.7  -4.58085   ATCGGCATGGAAGAA        CCCCGCCCCCG CATACCA CGCGGACGGGG        TTTCTTTGTGCCTAT  89 51
LCQ52_RS03150  718053 ..  718074 +  -2.9  -3.73775   CGGTCGCCGATTGGG           GCGAATGGC TTGT GTGGTTCGC            TTTGGTACCAGTAGG  54 319
         alr  722795 ..  722840 + -16.3  -3.18274   CTGACATGTGCTGAG CGTCACATATTCGGGAAATCG GCCC CAATCTCCCGAATATGTGCCG TTGAGTTGACGTCAG 100 97
LCQ52_RS03175  724318 ..  724333 +  -7.6  -2.89564   AGAAATGATAACCGA              CGGTAA AAAT TTACCG               TGTCTCAGGTGAGGC  56 142
        dnaG  726458 ..  726477 +   -10  -3.14344   CGTTGGCTAATAATC            TCTCCCTC TGAC GAGGGAGG             TTACTGGCCGCAGTC  67 31
LCQ52_RS03185 NONE
LCQ52_RS03190  727791 ..  727808 +  -4.9  -3.64822   AGTTGCGGATTGGCC             CCA-TCCA AAT TGGACTGG             TTTGGGTGGGCCAAT  55 151
        pdxS  728740 ..  728757 +  -4.1  -2.57192   TTCAGACCATCATGG             C-CGCTCG CGG CGAGTGAG             TGCATTACCTTGGCT  42 9
        pdxT  729488 ..  729501 +  -3.1  -2.64794   CGCTGTAGTCGATTC               GTCTG CCGT TAGAC                TGGTATCCGATTGAC  40 33
LCQ52_RS03205  731309 ..  731329 +  -4.7  -3.28712   AAGCCATCATCAGTT            CGCTGTG GCATGCG CATAGCG            TTGTCGGGCGAACGG  49 132
LCQ52_RS03210  732522 ..  732571 + -36.1  -3.32022   CGGCATATATCATAA TGGCCGGTGTGCTGCGGATTCTT GGTA AGGAATCCGCAGCACACCGGCCA TTCATGTATGCGGCA 100 56
LCQ52_RS03215  734537 ..  734556 + -12.8  -2.95116   TCCTTCATCGTTGGC            CGGCGGTC TTCT GGCCGCCG             TGGTTTCCATCCTGC  79 335
LCQ52_RS03230  738174 ..  738192 +  -2.3  -4.11394   TGATCCTTGTTCAGG             CCAAGCG CTTTC TGCATGG             TTTTACGGCTGAGCT  59 230
LCQ52_RS03240  739426 ..  739461 + -11.9  -4.30441   GTCACGATGTAATAA    GCCCTTGGTCCCT-CA TCGTC TGTGGGGGCCAGGGGC    TTTTGAGTATTATGC  93 36
LCQ52_RS03245 NONE
LCQ52_RS03250 NONE
LCQ52_RS03255  743208 ..  743222 +  -4.3   -3.4052   TGTCACCTGCTCCAC               CGTTA GTCCA TAACG               TTCGTTCAGTTCGCC  51 48
LCQ52_RS03265  746598 ..  746625 +  -2.1  -3.36878   AAGGCGTTGCCGAAG        TAAGCGCCCA AGCGTACAG TGGGC-CTTA        TTCTCAATAACTAGG  45 99
        purE NONE
        purK NONE
LCQ52_RS03280  748743 ..  748798 + -25.3  -3.06969   GGCTCAGAAAGCAGT G-AGC-GAATAACAAATGGGATCGGCT TCAA AGCCGATCCCATTTGTTATTCCGCTGC TATTCCACTGACTTC 100 16
LCQ52_RS03290  750305 ..  750333 + -18.9  -3.76125   GCTCCTTATATATCA        GGGTGCTTCGGGG ATG TCCCGAGGCACCC        TTTGCGTTAGGGTGA 100 143
LCQ52_RS03295  752530 ..  752544 +   -10  -2.87344   CTGCCGTAAAGCAGA               CAGCCT AGT AGGCTG               TCTGTAGGCAGCGTG  65 32
LCQ52_RS03300  754260 ..  754314 +  -9.4  -3.44229   GGCCAAACTGTTCGA CATCATCGCCAAAT-TCAGCTAGCG TGATAT CGCTCGCTGATATTGGGTGATGGCG TTGTCATAGTGACGT  66 4
LCQ52_RS03350 NONE
LCQ52_RS03355  767610 ..  767645 + -10.2  -2.72344   TCGGACTGCCAGGTG    GCGCGCGAGCCGGCCG GCAG CGGCTGGCCCTTGCGG     TACTTGCCGGTCAGC  60 345
LCQ52_RS03370  770925 ..  770938 +  -3.8  -3.13403   AAGCGGCCGCGGCAC               GTGC AGAATC GCAC                TATTGATGAACAGCA  47 411
LCQ52_RS03405  781606 ..  781624 +  -2.4  -3.41569   TAGGGGAATAGGAGC             CTTCTC GTTTGCG GAGAGG             TCTTTCCCTCAGTCC  45 30
LCQ52_RS03420  784686 ..  784726 + -16.2   -2.9186   AATGTAACCTCCTTG GC-GGTGCCCCCGT-GTGAC ATA GTCTCCGCGGGGGCACCTGC TGTGTGGCGTTCCCT  93 315
        rpsL NONE
        rpsG NONE
        fusA  788195 ..  788230 + -12.8  -3.42503   GAAGTAGCCAGTGTC    TTCAGTCAGCGGTAATA TCG TA-TACCGCTGACTGGG    TTCTGGCTCTTCAAA  84 56
         tuf  789582 ..  789607 + -15.5  -4.52589   TAGCGTTATAGGAAA         TCCCCTTCGAG GAAA CTCGGAGGGGA          TTTTCTATAACCGCA 100 71
LCQ52_RS03445  790552 ..  790570 +  -4.4  -2.75535   GGTCCAGGTCCGTGG             CCTAGGGC TAC GCCCAAGC             TAATTGAAATATTCG  45 102
LCQ52_RS03450  791497 ..  791516 +  -4.2  -2.56095   CGCCTGCGGCGGCCA            CCTCTCTC ATCA GAGGGAGA             TCAATTAGGTATCGA  44 92
LCQ52_RS03455  793102 ..  793117 +  -3.2  -4.11371   ATTTTGCTTCGGGGT              TGCCGT GCCC GCGGTA               TTTTCCGCAGTATTC  61 463
LCQ52_RS03475  795668 ..  795684 +  -4.3  -3.41341   GGGAGAGATTGGGGG              TGAGCCG GTT CGGTGCA              TGTTTCCATACCGTT  51 130
LCQ52_RS03480  797600 ..  797610 +  -5.4  -3.06915   CCGGTACATCAAACT                 TGAC GTG GTCA                 TTACATCCGGTGCCT  50 470
LCQ52_RS03500  800120 ..  800132 +  -5.5  -3.37056   AAGGATTTTGAGAGT                GCCAT ACA GTGGC                TTGTCGATGCGTCGT  53 56
LCQ52_RS03505  802602 ..  802612 +  -6.8  -2.75481   CGACAATATCGTCAC                 GCTG GTT CAGC                 TAGTTCGAATTGCAG  52 169
LCQ52_RS03510  805404 ..  805417 +  -5.2  -3.64822   TGCGCTGACTCGTAT               GGCG GTAACG CGCC                TTTGCATAGGACCCT  58 33
LCQ52_RS03515 NONE
LCQ52_RS03520 NONE
LCQ52_RS03525 NONE
LCQ52_RS03535  809965 ..  809979 +  -4.3  -3.78934   CTTTTTACCACGAAT               CAGAA CCATT TTCTG               TTGTTCTGGCCGAAA  58 116
LCQ52_RS03540  810358 ..  810391 +  -4.5  -2.79831   AAGTAGAGCTCGTAC     TCGAGCGGGGTCG GGGCCAGG CGAGCCTGGTCGA      TCTCGTCGCGCTTGA  45 128
LCQ52_RS03565  816699 ..  816754 +  -4.8  -3.96327   GCATCGGTAATGGTA GTGAGCCGCCGTCAGGTAGGTCACAG ATGTGG CTATTGCCT-T-TGACGGCGGCTTGC TTTATAGTCGGGAGT  60 48
LCQ52_RS03570  817571 ..  817581 +  -5.4  -3.15544   GCAGCAAGGCGCGCG                 TCTG ATG CAGA                 TTAATCCGGCTGCGG  50 21
LCQ52_RS03575 NONE
LCQ52_RS03580  819888 ..  819898 +  -6.8  -3.60234   GAAAGGCGGCAGACT                 GGCA CAG TGCC                 TTTCAGAGTGTCTGA  60 39
LCQ52_RS03585 NONE
        pheS NONE
        pheT NONE
LCQ52_RS03600 NONE
        argC NONE
        argJ  827773 ..  827787 + -11.4  -3.85698   ACGAAAGCTGACAAA               CAGCCC AGT GGGCTG               TTTGTAGCAGCCGGC  82 30
        argB NONE
LCQ52_RS03620 NONE
        argF NONE
        argR  831619 ..  831636 +  -7.1  -2.76189   CACGCCGTGCATAAA             TATACAG TCTT CTGTATA              TACTTGCATCAGTTC  52 45
LCQ52_RS03635  833012 ..  833033 +  -3.5  -2.50821   TCACACTCCATGTGA           CAGCCCTCG CCAG CGGGGGCAA            CTGTATGTTTGAACA  42 117
        argH  834575 ..  834602 + -10.6  -4.95547   ACGTTCTAGTCCCAA        TGAAGCTCCCTC TGAT GAGGGAGCTCTA         TTTTGTTGTTGTCAC 100 32
        thiS NONE
LCQ52_RS03650  835968 ..  835979 +  -7.2  -2.62613   GGCTGTGCCGTCCAG                CCCG ACTA CGGG                 GTATTTGCACTGACA  54 1
        thiF NONE
LCQ52_RS03660  837285 ..  837306 +  -5.9  -4.22214   TCTTGAAACCCACCA           CGATTAACGG TTC CCGTT-GTCG           TTCTTTTGGATGAGT  67 19
LCQ52_RS03665 NONE
LCQ52_RS03670  838825 ..  838838 +  -8.1  -2.63817   TGCGAAACTTGACTG               TGCCC AATT GGGCA                GTCTTATTCACAATT  56 100
        tyrS NONE
LCQ52_RS03680  842015 ..  842029 +  -2.1  -3.72576   AAACCGAGGAGTGAA              CGGCGT AATG AC-CCG               TTTCCTCAAAGGCAC  50 27
LCQ52_RS03685 NONE
LCQ52_RS03690  843259 ..  843288 +  -2.9  -3.19463   GATGACGTGAAGTGC      TGGATGGTGGCTC CATGCC GAGCCACC--CCG       TTGGTGGATGGTGGG  45 71
LCQ52_RS03695  844142 ..  844185 +  -6.6  -3.06796   TGGAGGTACGGTCGA TGCCTAGTGCGGTGGCACACG TGG CGCTTTCCACCGCACT-GCCG TTGCGTAGCATGGCG  51 75
LCQ52_RS03715 NONE
        recN NONE
LCQ52_RS03725  850851 ..  850879 +  -8.8  -3.63694   GATAAAAAAGTTACA       C-CCCCGCTGGCG GGGC TGTCGGCGGGGCG        TTGTTGGGCATGGGT  70 39
LCQ52_RS03730 NONE
LCQ52_RS03735 NONE
LCQ52_RS03740 NONE
LCQ52_RS03745  853844 ..  853895 + -19.6  -3.18945   CGCGCATTTGTCCGA CCGCGAATGAAAAGAGACCGACAG GAAT CTGTCGGTCTCTTTCCGTTATCGG TGTGTTATCAGTCCA 100 42
LCQ52_RS03765 NONE
LCQ52_RS03770 NONE
        nadD  862575 ..  862587 +  -4.7  -3.34013   AAGCGAAAGCCGGAT                CGGAC TTC GCCCG                TTCGTTGAGGCCGTC  50 200
LCQ52_RS03785  867195 ..  867223 + -20.5  -3.76373   TTACCTCAACTGACA        TAGCCCGTCCTTA TCA TAAGGACGGGCTA        TTTGCGTATTCAAAG 100 108
LCQ52_RS03790 NONE
         pth NONE
         mfd  872142 ..  872174 + -18.6  -3.39449   AGCAGTCGAGCCAGC      TATGGCTCACCGGG CAACA TCCGGTGAGCCATA      TTCATATTCATGCCG 100 55
LCQ52_RS03805  873247 ..  873262 +  -3.2  -3.08201   GGCACACTGGCATTG              TGAGCG CTAA CGCTAA               ATTTTGGGCGTGTTG  43 73
         eno  874691 ..  874726 + -16.3  -4.35116   TCCACTGAAGCTCGA    TACCCGTCGTATTCG TCAAGT CGAATGCGGCGGGTA     TTTTCGTGTGACATG 100 68
LCQ52_RS03815 NONE
LCQ52_RS03820 NONE
LCQ52_RS03825  877021 ..  877035 + -11.4  -3.85698   GAGCCGTTAAGCAAA               CAGCCC GGT GGGCTG               TTTGTAGGCGAGGGG  82 69
LCQ52_RS03830  877218 ..  877242 +  -6.3  -4.61231   CCACCGGAGGCACCT          TGAAATCGGCC TGT GGCCGATGCCG          TTTTTGCGGCTGTGC  75 29
LCQ52_RS03835 NONE
LCQ52_RS03840  879697 ..  879709 +  -3.3  -3.53224   ATGGTGCTAAGGTAG                GGCGC ATT GTGTC                TTTGAAGGAGGACTA  49 139
LCQ52_RS03845  880155 ..  880174 +  -7.8   -4.4767   TCAGCACATGACGAA            CGCCGG GGTCATAG CCGGCG             TTTTGTCATAAATAA  79 48
LCQ52_RS03850  880723 ..  880748 + -19.1  -3.61902   TGAGTTAAGTGACTG         GTATGCCCCCG TAGG CGGGGGCATAC          TTATATGTCGTAGCG 100 38
LCQ52_RS03860  882661 ..  882682 +  -3.6  -3.04263   GCCACGGGCGGGAAG           CCGTGCAA CGCGAT TGGCGCGG            TATTGAAGATGCGAT  45 79
LCQ52_RS03865  884275 ..  884302 +   -20  -2.62184   CGAAGCCCGAAATGA        GGAAACCCTCCC GAGT GGGAGGGTTTCC         TAGTATGACGAAGCG 100 43
LCQ52_RS03885 NONE
LCQ52_RS03890 NONE
LCQ52_RS03895  893431 ..  893475 + -18.7  -3.21276   TCGGCGGCGATATAG CTGCGGGCCGTGCCACT ACCTTATTACA AGTGACACGGCCCGCAG TGTTGTCACAGGCCC 100 78
LCQ52_RS03905 NONE
LCQ52_RS03910  896023 ..  896067 +   -10  -3.53012   GCGCGCGATGGACAG GCCAAGACCGGTGCC-GC-CCG ACT CGGTGCCGGGACCCGTCTTGCC TTTGACAAAGCGCCG  68 512
LCQ52_RS03935  900776 ..  900809 + -10.3  -3.29364   TTTGATTGTTTTGAG     GCCCCGGTCGTGTC CTTATGC GATGCG-CCGGGGC     TTCGTGATTCATAAT  71 41
        ispF  901583 ..  901598 +  -5.4  -3.05384   CAAGCACAGCACGCT              GGCGAT CACC ATTGCC               TTGAATGGGGAGCCG  47 215
LCQ52_RS03960  905586 ..  905597 +    -3  -3.54459   ACGACACGCCTAGAG                TTTC CTAG GAAA                 TTTGGGCAGAGTTGC  49 28
        rpsA  907208 ..  907244 + -10.2   -4.6902   TAGCGCTTAGCGTTT   AAC-GGAAACCCGGTCC GATT GGGCCGGGTTTCTTGTG    TTTTTGGAGTTATCC 100 55
        coaE  907977 ..  907987 +  -2.4  -3.12351   GGTCGCTAAGATGAG                 GCCC TAT GGGA                 TTCAATATCGAGCGC  42 32
        uvrB NONE
LCQ52_RS03980  911336 ..  911347 +  -2.2  -2.72511   ATGAGTCGGCTCGCG                CTAG TAGA CTGG                 GTTTCGGCAAATGGG  39 111
         pyk  912963 ..  913007 + -16.4  -2.69151   GATACAGCCCTAGAC CGCGAGGGACATGCTCCGGA ACTCC TCCGGGGTGCGTCCCTCGAG TCGTATCTGGCGCCG  89 138
LCQ52_RS04005  915392 ..  915403 +  -5.8  -2.70932   GAAATTATTGTGAAC                CCCA TTGT TGGG                 TAATTCAAGAAAGAG  50 59
LCQ52_RS04010 NONE
        polA  919171 ..  919185 +  -6.4  -3.85698   GAGCCGTTGAGCAAA               CAGTCC AGT GGATTG               TTTGTAGGCGAAGGC  63 73
LCQ52_RS04020 NONE
LCQ52_RS04025 NONE
        glgX NONE
LCQ52_RS04035  923504 ..  923517 +  -3.1  -3.29461   TCCGGGATACAAGCG               CGAAC AACG GTTTG                TTGTACCCGCGCTTG  45 63
LCQ52_RS04040 NONE
LCQ52_RS04045  924878 ..  924888 +  -5.4  -3.28712   AGAAGCACGGGTTCC                 TCTC GGA GAGA                 TTCTGCCCGAGCGAC  52 149
LCQ52_RS04065  929643 ..  929653 +    -4  -3.55761   ACGGTGATAAAACTT                 GTAT GCT ATAC                 TTTACAAAATCAATG  51 57
LCQ52_RS04070  931217 ..  931266 + -25.1  -3.40371   TCCCATCCCTCCCAT AAGGCCCGTCCGCC-TGAACCGCA AGA TGCGGTCCGTGGCGGACGGGCCTG TTCGTTCCTGCGGTC 100 49
LCQ52_RS11080 NONE
LCQ52_RS04080  932208 ..  932224 +    -8  -2.79492   GACTCGGATCATCAG              CAACGG ACGCG CCGTTG              ATTTCCACTTCCGGA  57 119
LCQ52_RS04095  933988 ..  934004 +  -2.2   -2.5166   AGATCGAATCCCGCA              TCGCTG CCGAC CGGTGA              ATAATTTGTTTGATA  38 9
        aroA  935460 ..  935497 + -17.1  -3.04144   CTCATGACCATATAC   GAATGGGGGCTGATTCC AATC GGAATCAGCCCCCATAG    TGTTGCAACTAGAGA 100 117
LCQ52_RS04175 NONE
LCQ52_RS04180  950844 ..  950898 + -14.3  -3.46336   AAATGACCGCGTAGC AGGAAACGTCCAGGGCCATTCCGGC ATACG GATGGAAAAGTCCTGGACGTTTCCA TCTTTGCGTTGCGGT  95 54
LCQ52_RS04210  958449 ..  958482 + -19.7  -3.72027   GTTAGTTCGCTAACA     CCAAAGGGCTCGGGA TTCG TCCCGAGCCCTTTGC      TTATTCATAAGCCCT 100 59
LCQ52_RS04220  960593 ..  960633 + -15.6  -3.05384   AGCCATTACCACCAA GCGGAGCGAGTACCCGA GCCAACAA TCGGG-ATTCGCTCCGC  TTCCGTGACCGGACA  93 78
LCQ52_RS04225 NONE
LCQ52_RS04230  962585 ..  962619 + -14.3  -3.26712   TACTGACCCCATAGA     TCGCGGCCCTCGC CAATATGGA GCGAGGGCCGCAA     TATATTCTTCGCGCT  95 48
LCQ52_RS04235  963846 ..  963860 + -11.4  -2.87211   GAGGCGTTAGGCAGA               CAGCCC AGT GGGCTG               TCTGTAGCCGAAGGT  71 69
LCQ52_RS04240 NONE
LCQ52_RS04245  966174 ..  966203 +  -9.4  -3.65425   AATCTCAAGACCGAA       CCGCTCATAC GAACATCACA GTATGAGCGG        TTTCCCATATCTGGA  70 74
        pflB  968800 ..  968830 + -17.6  -3.90744   GCGGCAATGACTAAC       TGAAGGGGTGGGGC ACG GCTCCACCCCTTCC       TTATTTCCCACAGAC 100 59
        pflA  969737 ..  969751 +  -7.1  -3.14878   AACCAGTTCAAGGAC               CACGG CTTCA CCGTG               TATTAAATTGCAGGG  54 5
LCQ52_RS04260 NONE
LCQ52_RS04265 NONE
         tig  973222 ..  973254 + -20.7  -3.41745   TTAGCATGATTGTTT      GAGCCCGGAATCGTG TTT CATGGTTCCGGGCTC      TTCCTATTCTGGCAA 100 57
LCQ52_RS04275 NONE
LCQ52_RS04280  975407 ..  975422 +  -2.6  -2.70932   CTTCAAGGCGGTAGT              CT-GAAC AAT GTTCGAG              TAATTAGAAGGAGAA  39 95
LCQ52_RS04285 NONE
LCQ52_RS04290  976787 ..  976824 + -21.5  -3.55444   AAAACTTCCGGACAT   TGCAATACCCTCGGTCG GCAA CGACCGGGGGTATTGTA    TTTCAAGGATGACAA 100 39
        clpX  978357 ..  978375 +  -5.9  -3.18274   GTCGGGATGGTGCGA             CTCGCCG CAACA CGCCGAG             TTGCATTCAGCTGAA  54 108
LCQ52_RS04300 NONE
LCQ52_RS04305  978613 ..  978639 +   -13   -4.2361   TCTGGCGCACAGTAA         GCCTCGAAAGCG AAA TGCTTCCGAGGC         TTTTCCAATTGTATT 100 31
LCQ52_RS04310  980260 ..  980286 + -13.1  -3.62046   TTGTTTCGTGAAAAC         CGTACGCTGAG ACGCG CTCAGTGTACG         TTCTTCACGAGATGA  86 73
LCQ52_RS04315  981485 ..  981495 +  -5.4  -2.74192   GGGTGAGCGTGGACT                 CGAA ACC TTCG                 TCATCTTCGACGGTG  44 124
LCQ52_RS04355  991980 ..  992015 + -16.4  -3.17797   TTGACCCAAGGAATA    GAAAGCTCGCACTG-AT GTC ATGCAGTGCGGGCTTTC    TTGCGTCTGTATGCC 100 140
LCQ52_RS04360 NONE
LCQ52_RS04365  996018 ..  996037 + -13.6  -4.15044   GGCGTAGGGCAATAA            GCTCCCTC ATCA GAGGGAGC             TTTGTTACACCAGCC 100 34
LCQ52_RS04380 1000991 .. 1001010 + -13.6   -3.0094   GACTCAAGGAAGCAA            GCTCCCTC TGAT GAGGGAGC             TCTGTATACATGCAC  84 39
        proC 1001903 .. 1001927 + -13.6  -2.82327   CATATCACAGTCAAA          GCCTTCGAGC CGTAT GCTCGGAGGC          CTTTGCATATGGCCG  79 68
        ychF 1003109 .. 1003157 + -12.6   -4.8143   GAACACCCCAGAAAA CGGCGTGATTCCAACGTTTTCGA GTTT TCGGAACTGT-GGAATTGCGCCG TTTTTCGATTATTGA 100 46
LCQ52_RS04395 NONE
LCQ52_RS04400 1005662 .. 1005695 + -21.8  -4.00532   CGATATGTCGCAGGG     CCGCCCCGG-CGCTC GCAAA GAGCGACCGGGGCGG     TTTCGTGTTTAGGGC 100 252
LCQ52_RS04435 1012811 .. 1012841 + -14.1   -3.6053   AGAATGAATGGAATA       TGAGGCTTCCCTT CTCGC GGGGGAAGCCTCA       TTGCTTTGTCCGCGG  95 63
LCQ52_RS04445 1016132 .. 1016148 +  -9.3  -2.64243   CCGGGGCCGTGCCCT              CGCCCGC TTG GCCGGCG              TCATATACAGTCTGA  56 416
LCQ52_RS04460 NONE
LCQ52_RS04465 1020265 .. 1020306 + -18.1  -2.54523   CCAACATGCCAGCAT AACGGCCGGTCTTGCGATT GCAT AGTCGCAAGACCGGCCATG  TGCATTGAGATATCG  95 41
LCQ52_RS04470 1021854 .. 1021864 +  -8.2  -3.25073   GGGCATTGTCGGCAA                 CGGC CTC GCCG                 TCTTGCTCTTGGGCG  58 384
LCQ52_RS04480 NONE
LCQ52_RS04485 NONE
LCQ52_RS04490 1025231 .. 1025258 + -15.6  -3.77087   AGCCCTTTTGCACAA        TGGCCCCTACCT TCAC GGGTGGGGGCCA         TTTGCGTGTTCCATG 100 75
LCQ52_RS04495 1027766 .. 1027801 + -24.9   -3.7511   GACAGCGCGTATGAA    TCAGGCCCGACGACC TTTGAT GGTCGTCGGGCCTGA     TTGTGTTATAGGCCG 100 44
LCQ52_RS04500 1028656 .. 1028682 +  -3.7  -4.19577   GAATGCTGGGCGTCG        GCGCT-CGTCGA ACGA TAGACGAAGTGC         TTGTTTTCCAGCTTC  63 151
LCQ52_RS04510 NONE
LCQ52_RS04515 NONE
LCQ52_RS04520 NONE
LCQ52_RS04525 1034615 .. 1034625 +  -8.2  -4.56775   GAGCTGTGAAGAAAA                 CGCC GGA GGCG                 TTTTTAGGCGAGGGT  87 74
LCQ52_RS04540 NONE
LCQ52_RS04545 NONE
LCQ52_RS04550 1040917 .. 1040929 + -10.5  -3.40371   CGGCGAACTTGACTC                GGGCG ACC CGCCC                TTCCTTCATCAGCTC  68 80
LCQ52_RS04565 1043884 .. 1043894 +  -4.6  -3.65351   CGTGAAGGTGATGGT                 CTGC TCG GCGG                 TTTCGGTGCCGATCC  55 138
LCQ52_RS04575 1045995 .. 1046012 +  -7.1  -3.05343   AAGGTATATCGTTTT             TCGATAT AGTC ATATCGA              TGTTCGCGGTGTCGC  54 113
LCQ52_RS04580 NONE
LCQ52_RS04585 1046594 .. 1046629 + -14.9  -2.71763   CTCTCCCAAAATCAA    TGATGCCCTATCATC CTGCAA GACGATAGGGCATCA     TCATGTGATTATGCG  83 82
LCQ52_RS04600 1051434 .. 1051451 + -12.7  -2.63079   GTTGTAGATAAATTG             GCCCCTC TGAC GAGGGGC              TGAGTTATATACCAA  75 34
LCQ52_RS04605 1051979 .. 1052016 + -15.6   -2.6563   ACTGATCGAGCAGAC   GGCCGGAGCCCAGC CATTCCGAAC GCTGGACTCCGGCC    TCGCTTATTGCAACC  85 36
LCQ52_RS04610 NONE
LCQ52_RS04615 1054420 .. 1054447 + -11.2  -3.18274   GGAGGCCCGACTCAG        CGCTTGCCAGGC ATAT GCAAGGCAAGCG         TTCCGTTCAGATAAC  74 163
        rpsD 1055142 .. 1055186 + -19.4  -3.30159   AAATCCAGGACATAC CGCTCGAACCCCGC-GCTTCT TTCA AGAAGCCGCGGGGTTCCTGCG TTGTAGGGCGATTAC 100 60
LCQ52_RS04630 NONE
LCQ52_RS04635 NONE
LCQ52_RS04640 NONE
        alaS 1061657 .. 1061685 +  -5.9  -2.72591   CACGAGGCGCAGAAA        GCCTGATTCCGCC AGT GGTGTGGTTAGGC        GTTGATTTGGGTAAT  50 20
        ruvX 1062131 .. 1062150 +  -2.8  -4.12599   CCCGGGAGCAGTGAG            GTATCGGT TATG ACCGATGA             TTTTAACGAGTTCTT  58 27
        mltG 1063427 .. 1063470 + -19.8   -2.6063   AATCGCGCCCGCCAA TATCACCGGCACATAC-GGCA CCT TGCCCGCATGTGCCGGTGATG TGCGTTGTGGGTCGA  90 131
        aroC 1065097 .. 1065120 +  -2.4   -2.8372   CTCGTGGCCGGAGCA          CATGCGCT GAACGAAG GGCGTATG           GTTTCGTGACGACTG  39 16
LCQ52_RS04670 1066973 .. 1066990 +  -4.1  -3.35996   AAACAAAAGGAGTCC             CAATGAC CAAA GTCATCG              TTGTCAATGGCCCTA  49 187
        aroQ 1067610 .. 1067625 +    -9  -2.53263   GCGCGCCGTACCAGG              CCATCG TCAC CGATGG               TCCCTTCCCGGTGAA  56 214
LCQ52_RS04685 1068450 .. 1068471 +  -3.8  -2.82623   TGATAGAGTGAAATT           CCATG-GTT AGAAG AACACATGG           TAATTCTCAAGAACA  43 169
LCQ52_RS04690 1070193 .. 1070234 + -26.9  -5.60689   AAGACATACGGTAAA GACGTGGTGGCGAAATATC TAAT GATGTTTCGCCACCACGTC  TTTTTTGTTGTATGA 100 105
LCQ52_RS04695 NONE
        sufB NONE
        sufD NONE
        sufC 1075768 .. 1075786 +  -7.3  -3.38046   TATTCTCGACACGCT             CCGGGCC GCTTA GGCCAGG             TCTTTACGGTCGCGA  61 70
LCQ52_RS04715 NONE
LCQ52_RS04720 NONE
LCQ52_RS04725 1078350 .. 1078368 +   -16  -4.26188   CTCTATACGAGAAAA             GCCCCGCA TGA TGCGGGGC             TTTTCCATGTCTGGA 100 73
LCQ52_RS04745 NONE
LCQ52_RS04750 1082146 .. 1082158 +  -3.3  -3.14211   GCTCGACGAGTAGTA                GGGGA ATA TCCGC                TTCGTGGCAACGACT  43 28
LCQ52_RS04755 NONE
        ybeY NONE
LCQ52_RS04765 NONE
         era 1086469 .. 1086488 + -13.6  -4.35518   GTATAGACGAAAAAA            GCTCCCTC GTCA GAGGGAGC             TTTTGCTATACGGTT 100 44
LCQ52_RS04780 NONE
LCQ52_RS04785 NONE
LCQ52_RS04790 1091956 .. 1091988 +   -15   -4.1523   CCCTCAGTCAGCTTC     GCTGGCGGCTCCCCTC TGT GAGGGGAGCCG--AGC     TTTATATCTACTACA 100 118
LCQ52_RS04800 1094128 .. 1094169 + -20.3  -4.61231   AGAACATAACTGAAA CGTGGAAGCCCGCAGCCGTT GAG AACGG-TGCGGGCTTCTTCG TTTTTCACCATGTGA 100 68
LCQ52_RS04805 1095455 .. 1095500 + -12.7  -3.06583   AGCACCTTTTGTTTC TGACTAAGACCCCTTGGAACAG CAA CAATTCCAAGGGGTCTTGG-CG TATTGGAAATGTTCT  81 44
LCQ52_RS04810 1096663 .. 1096675 +  -9.1  -3.33162   CCCGGCCATACTACT                CAGGC AAG GCCTG                TTGTAGGCTCGGGTA  66 156
LCQ52_RS04815 1097766 .. 1097793 + -15.6  -3.87869   ACGGAGATACAAAAA        GTCCCGCAAGCC AGAT GACTTGCGGGAC         TTTCTAAAACCTTAA 100 223
        lepA 1100084 .. 1100104 +  -3.2  -2.74701   AAAGACAAGATCCGC           GCCGCTCAG AAGA CCGAG-GGC            TAGTGTTCGAGGTCT  41 2
        hemW 1101717 .. 1101750 +  -5.1  -3.53012   TCCCCGTCATCGCGG     TTGGACAGGATGCTG TCCA CGGCGGCCTGGCCCA      TTTCGGCCAGCGGCA  53 205
LCQ52_RS04840 1104186 .. 1104202 +  -6.5  -2.87344   GGAAACCGTGAGCTG              CGGCG AACTGAC CGCCG              TGTATCGCAAAGATA  53 177
LCQ52_RS04855 1109603 .. 1109617 +    -5  -3.01766   ATGCCGAACTGTAAG               CGCTTA CCT TAAGTG               GTTTGTAATATGGTT  50 106
LCQ52_RS04860 1110450 .. 1110469 +  -3.6  -3.88946   GGGGATTGCAATGCG            GGAAATCA TTGC TCATTTCC             TTGTTGTATGCCGTG  56 502
LCQ52_RS04870 1112277 .. 1112302 + -10.5    -4.371   CCCAACGCAGCATTT         CACGATACGGA CGTT TCCGTATCGTA          TTTTCGTGTGGTCAA  90 462
LCQ52_RS04880 1113837 .. 1113852 +  -3.2  -2.94322   GATTTTCTTACGTGC              CCACAA CCAA TTGAGG               TGATTTCGGTGACAT  42 224
        gltB NONE
LCQ52_RS04890 1119990 .. 1120020 + -18.5  -5.42259   ACGCGCTGTTTAGAT       GAATCCTGCGGTA ATATC TACCGCAGGATTC       TTTTTTTGCGGATAA 100 43
LCQ52_RS04895 1120549 .. 1120568 +   -10  -4.84311   GCTTGAAAAGCAAAA            CGCACGAC GGAA GTTGTGCG             TTTTCTTGTATGCGG 100 61
        glgA 1121924 .. 1121963 + -16.6  -4.38712   GCTCGCGCAGCGTGA  CGGAGGGAGAG-ACCGT GCAATAA GCGGTGCTCTCCCTCCG  TTTTGTACCACTGAG 100 57
LCQ52_RS04905 NONE
LCQ52_RS04910 1123790 .. 1123819 +  -2.9  -2.56571   GGCTATGTCGTTTGC       TCTCAG-ACGGAGG ATC CTTTCGTGCTGAAA       TAAGTTGAATATATA  40 41
LCQ52_RS04915 1124164 .. 1124177 +  -2.3  -3.59979   GTGGTCATCTGTCCG               TCGCG GTTG CGCAA                TTTACGGTGGCGGAG  47 160
LCQ52_RS04920 NONE
LCQ52_RS04925 1125305 .. 1125315 +  -3.2  -4.40804   CGGAGTTGCCAATAG                 TAGC GGA GCTG                 TTTTGTAGAGTCGTA  67 376
LCQ52_RS04935 1126889 .. 1126928 +  -7.2  -3.42581   CAGATGCCGGTGCTC  GTATTCCTC-GAAGTCATC ACG GACGGCTTCCGCGGGATAC  TTGCTCTTGGTCTTT  60 347
LCQ52_RS04950 1129756 .. 1129775 +   -10  -2.84634   ATAACGCTCGACAAT            CTCGTGTG CCAG CACACGGG             TCTCCTCATCTCCGA  61 353
LCQ52_RS11095 1132461 .. 1132480 +  -5.8  -3.02471   TCGGTTCCTGCAAGC            TATCATCA AAGT TGGTGATA             TGTCTATGCTGGCCA  52 412
LCQ52_RS04975 1134409 .. 1134428 + -10.6  -5.24129   AGAAAGGCTCCAAGT            CGCCGGGG GCTC CCCCGGCA             TTTTTTGTCAACGGG 100 144
LCQ52_RS04980 1135142 .. 1135154 +  -3.3  -3.09273   ACTGGAATCATAAAT                TTGGC AGT GCCCA                TATATATTCGGGGCA  43 28
LCQ52_RS04995 1138040 .. 1138066 +  -6.6  -3.78775   GATAGGTCAGATGTC        CGGCCCGTTCA AGGACC TG-ATGGGCCG         TTTGCTGGTCGGGCA  62 158
LCQ52_RS05010 1140912 .. 1140936 +  -2.2  -2.78463   TAACCGCCAAACGAT         GA-GTTTGTGA ACGC TCACACACCTC          TATACTGGAAGCAAT  39 38
LCQ52_RS05015 1141613 .. 1141623 +  -8.2  -2.83772   GGCCATTTATAAGGG                 CCGG AAT CCGG                 ATGTTTTGCTACCCT  57 76
        metE 1143985 .. 1144015 + -16.9  -4.03413   CAAGTAGCGGAAATC       ACCGAGCTCCCTC TGGAT GAGGGAGCTCGGG       TTTATGTAAGGAAAT 100 34
        metF 1144896 .. 1144931 + -20.4  -2.57468   CAAGGTTGATGCATA    TCGCGGCGCGGCGCAT CTCA ATGCGCCGCGCCGCAC     GTTAATCTGCTGGCG 100 32
         bsh 1145988 .. 1146013 + -13.4  -3.02649   ATGACTCCTTCCCGG         CTCATGCCCT ATTCGG AGGGCATGAG          TGTATATAGTGGAAT  84 37
LCQ52_RS05035 NONE
        pyrB NONE
LCQ52_RS05045 NONE
LCQ52_RS05050 1152255 .. 1152271 +  -6.5  -2.91264   ACAATCATCGGCTCC              CAGCTGA TGT TCAGCCG              TCTGTAGATAACACA  53 2
        pyrF 1153342 .. 1153361 + -11.4  -3.29947   AACCTGCGGTTGACC            GCTCCCCT GATA GGGGGAGC             TTGATGTGCTGAATA  74 118
LCQ52_RS05060 NONE
LCQ52_RS05065 NONE
        pyrE 1155912 .. 1155929 + -12.7  -5.83226   ATCTAAAAACCAAAA             GCGGGCT TGCG AGCCCGC              TTTTTTTATTACGTT 100 50
LCQ52_RS05075 NONE
LCQ52_RS05080 1157532 .. 1157562 + -16.8  -2.65448   TCTCAATAGCGCAAA       AGCCGGCCCCTGAG ATA CTCAGGAGCCGGCC       CTTACTTCCATTTCC  89 73
LCQ52_RS05115 NONE
LCQ52_RS05120 1165374 .. 1165405 +    -3  -2.61264   CAAACATGGGCGTAG      GTAACGGCATGGTT TGAG GACTATGGTGTTGC       GTTATCGGTCGGAAA  40 51
        lepB 1166301 .. 1166330 +  -7.1  -4.67234   TCGCGCGCGACCCAA       AGCGTATCGAGGTC GTC GGCCTCGGT-CGCC       TTTTTGCGCTTGCGT  78 248
LCQ52_RS11100 1169412 .. 1169433 +  -8.7  -3.35912   GCCGCAGTCGCACGT           CGTCATCGGC GTG GCCG-TGGCG           TTGATGTGTCTGATG  66 210
LCQ52_RS05150 NONE
LCQ52_RS05155 1170716 .. 1170726 +  -2.4   -3.2614   ACACTGACGCCGAAC                 CGTC GAA GCCG                 TTCCTGTGGAAAATC  43 118
LCQ52_RS05160 1171319 .. 1171337 +  -8.9  -3.41745   GTGTGCGTGCTGTGC             GATGCTC CGAAC GAGCATC             TTGATGTTCTGCACG  66 369
LCQ52_RS05175 NONE
LCQ52_RS05180 1174077 .. 1174101 +   -10  -2.57132   ATCAGCGATTGCAGA         CCGGCA-CGCT GCGC GGCGATGCCGG          CTTCTGCGGGCACGG  59 475
LCQ52_RS05220 NONE
LCQ52_RS05225 1180616 .. 1180631 +  -6.1  -3.28712   CAGCACCTCCTTGCG              GCTGG CGACTC CCAGC               TTGTCGGCCACGCGG  52 519
LCQ52_RS05250 NONE
LCQ52_RS05255 1185764 .. 1185776 +  -2.6  -3.31792   CACCGGCACGTCCGG                CCTG GTATG CGGG                TTATGGCAATGCTCG  45 126
LCQ52_RS05260 1186429 .. 1186445 +  -5.1  -2.98823   TGCGATAAACGCATT              GGCAG ACACTTG CTGCC              TATCTGTAAACACAC  49 53
LCQ52_RS05265 1187094 .. 1187108 +  -8.6  -4.33165   CTTGCGTGTAAATGG               CCGATT ATC AATCGG               TTTTAATCGATTTCG  81 49
LCQ52_RS05280 NONE
LCQ52_RS05285 1189517 .. 1189528 +    -3    -3.727   GATACGAATCGCCTT                TCAT CCCA ATGA                 TTTCGCTCTCATGGC  51 251
LCQ52_RS05290 1190827 .. 1190865 +  -6.7  -3.59979   GCAACAGCCAGCCGA  CCATCGCCGGGCATGCTG CGCC CAGTATGCC-GACCGTGG   TTTCAAATACGGCAG  59 197
LCQ52_RS05305 1194150 .. 1194164 +  -6.4  -3.22448   ATACGAGGTTAGCTA               TCAGCG GGG CGTTGA               TTGATCCGTCTTCAT  54 91
LCQ52_RS05315 NONE
        trpA 1198091 .. 1198110 +  -5.7  -3.32844   AACGCCCGGTAAACA            CCCG-GTG CGCCT CACGCGGG            TTGTGCCGTGACACG  56 29
         lgt NONE
         rpe NONE
LCQ52_RS05335 NONE
        hisG NONE
LCQ52_RS05345 NONE
LCQ52_RS05350 NONE
LCQ52_RS05355 NONE
LCQ52_RS05360 NONE
LCQ52_RS05365 1204322 .. 1204342 +  -9.1  -2.90194   AGCACGGGGTTAGAC            TGATTGCAG AAA TTGCAATCA            TGTGATTACACCAGT  62 50
LCQ52_RS05370 1205048 .. 1205077 + -17.9  -4.45484   CATGTATGGTTGTTG       GCGACTTGCCGGC TTTG GTCGGCAGGTCGC        TTTGTTGTATGTGTT 100 43
LCQ52_RS05375 1205671 .. 1205683 +  -6.3  -3.07622   ATGTCAGATTAGTTA                TCCTT GAC AAGGA                TTCGGTCGCCTGTAT  52 128
LCQ52_RS05430 1218477 .. 1218531 + -33.3  -2.76404   ATAGCAGGCGAATAG CAAAGGTGGGATTCCGCTTGGACCCG TTGA CGGGTC-AGGCGGAATCCCACCTTTG TGCGTTTTGGCTGAG 100 279
LCQ52_RS05525 1232510 .. 1232562 +  -6.4  -3.05816   GAGCTGGCTCGCGTA GCGAGACTGAGGGTGGTTCTGCTGG CATATT CCAGT-G-ACCACCCCCAGTCA-GC TTCGCTGACAGCTCC  52 70
LCQ52_RS05535 1234907 .. 1234932 +  -8.3  -3.17763   CCTCCACGCACGTCA         CG-GAACACGCG CTC CTCGTGTTCGCG         TTGCTCGCATATCGG  58 492
LCQ52_RS05545 NONE
LCQ52_RS05550 1236678 .. 1236708 + -12.6  -3.06228   GCTGGATTCTTCAAC       CGCCCTATCGGTGT GCA AGACCGATAGGGCA       ATTCTTTCTAATCGA  81 112
LCQ52_RS05570 NONE
LCQ52_RS05575 1239429 .. 1239457 +  -4.5  -2.70704   GAAGCAGAGGACGGT        GGTCTCAAATGAG CAA CGCATTGCAGACC        CTTCGTTTCGAAGAT  45 14
LCQ52_RS05580 1240282 .. 1240293 +  -4.4   -3.3382   TCTTACAGACATTCC                TTCC CCAT GGAA                 TTGGTATGTGATCCG  51 103
LCQ52_RS05585 NONE
LCQ52_RS05590 NONE
LCQ52_RS05595 NONE
LCQ52_RS05600 NONE
LCQ52_RS05605 NONE
LCQ52_RS05610 1242353 .. 1242381 +  -2.9  -2.91264   GACTACGACTCACCT        CCAAGGACAGGCA TGA TGCCTGACCGGCG        TCTCTGGATGCCGCG  42 3
LCQ52_RS05615 NONE
LCQ52_RS05620 NONE
LCQ52_RS05625 NONE
LCQ52_RS05630 NONE
LCQ52_RS05635 NONE
LCQ52_RS05640 NONE
LCQ52_RS05645 NONE
LCQ52_RS05650 NONE
LCQ52_RS05655 NONE
LCQ52_RS05660 NONE
LCQ52_RS05665 NONE
LCQ52_RS05670 NONE
LCQ52_RS05675 1250770 .. 1250798 + -14.7  -5.39221   ATAGGATTGGCGGGA        GGTTCCGGCTA ATAGGTC TAGCCGGAACC        TTTTTTACTTCTTGT 100 496
LCQ52_RS05690 NONE
LCQ52_RS05695 1251741 .. 1251771 +  -4.6  -3.20573   AAAATCCCAAAACCG      GCCGCCA-CCGGG ACACTA CCCGCATGGCCGC       TCTTCCTCTCCCTCC  49 58
LCQ52_RS05700 NONE
LCQ52_RS05705 NONE
LCQ52_RS05710 NONE
LCQ52_RS05715 NONE
LCQ52_RS05720 NONE
LCQ52_RS05725 NONE
LCQ52_RS05730 NONE
LCQ52_RS05735 NONE
LCQ52_RS05740 NONE
LCQ52_RS05745 1259258 .. 1259280 + -11.3  -4.67038   TTAACCGTTTTCCTA           GACCCTGCA TGCGT TGCGGGGTC           TTTTCATTTTGAAAG  95 49
LCQ52_RS05750 NONE
LCQ52_RS05755 NONE
LCQ52_RS05760 1260722 .. 1260732 +  -2.4  -3.47617   AACCATCAACTAAGA                 GGGG AGT CGCC                 TTATGGCTTTCGGAT  47 43
LCQ52_RS05765 NONE
LCQ52_RS05770 NONE
LCQ52_RS05775 NONE
LCQ52_RS05780 NONE
LCQ52_RS05785 NONE
LCQ52_RS05790 1267988 .. 1267999 +  -7.2  -3.90045   AATATCGCGACCCTC                CCGC ACCA GCGG                 TTGTCTTTGGTGTTC  68 443
LCQ52_RS05810 NONE
LCQ52_RS05815 1270516 .. 1270532 +  -2.1  -4.07568   GCCACCGTGAAGGGA              GCCTGAC CAT GCCAGCC              TTTTACGCCGGCAAA  56 20
LCQ52_RS05820 1271330 .. 1271349 +  -7.1  -3.09516   AACTCTCACAAACAA            GTCCCAC CATCGT GTGGGGC             TTACCTCATAGAAAG  54 136
LCQ52_RS05825 1272340 .. 1272352 +  -6.9  -4.64676   GTGCGCTCGACGAGC                GTGCC GAT GGCGC                TTTTGTTGCGGCTGC  78 496
LCQ52_RS05835 1273693 .. 1273716 + -13.9   -4.2535   AATCGACTGATTCCA          GCCCCACAC CATACC GTGTGGGGC           TTTTCCATATGGTGT 100 31
LCQ52_RS05840 1274919 .. 1274960 +  -4.2  -4.42748   CCTGCCGCTAACCCA AACCGATGCCGCCACCCG ATTATG CGGGTGACGGCATCACCA  TTATTTTTACGATCG  68 30
LCQ52_RS05845 1275425 .. 1275462 +  -8.3  -4.07885   CGGTTAAAACGAAAA   AAGCCGCTCAGCCCTAC TCCC GTAAGGCAAAGCGGCTA    TTTTCCAACCCACTC  77 206
         tkt 1280392 .. 1280431 +  -6.2  -3.05384   CCCTCAGTCCGCGTT  GCGGACAGCTCCCCTCTC CCAG GAGAGGGGAGCCTAGGGC   TTGAATCCAAGGAGA  52 137
         tal 1281603 .. 1281632 + -15.8  -3.38832   ACTGATTAGCTCACA       GAAGCTCCGACC CCAACC GGTCGGGGCTTC        TTACGTTTGTTGCTA 100 72
        brnQ 1283223 .. 1283236 +  -2.3  -3.87994   ATGGAGTCTGCGTCA               CCTCA CCAC TGTGG                TTTATGACGGTGACT  52 226
LCQ52_RS05965 NONE
LCQ52_RS05970 NONE
LCQ52_RS05975 NONE
LCQ52_RS05980 1311119 .. 1311131 +  -5.5   -4.1196   AAAAAATGGCCGATC                TCGTG CAA CACGG                TTTTGCGGATCCGTT  67 133
LCQ52_RS06000 1314115 .. 1314159 + -24.4  -2.53911   CCACTAACGTACAGA CAGCGATGCCCCCGCCGACA ACTTC TGTCAGCGGGGGCATCGCTA TGCGTTGAACGTTAC 100 34
LCQ52_RS06020 1318115 .. 1318128 +  -9.5  -3.10796   CCTGGTCGTTGATGC               CGCGC ATCA GCGCG                TATTCGATACTGACG  60 310
LCQ52_RS06075 1329864 .. 1329901 +  -3.3   -4.8048   TAATACCTCTAATTG   TTCCCGGATATGTGG-CG ATT TGTCCACTGGTCCGGGAC   TTTTTCGTATACGGC  70 164
LCQ52_RS06080 1331675 .. 1331691 +  -4.4  -3.67989   TCCGGCCGACAATCA              CCGTTA AATCA TGACGG              TTTCAGTACGATTTT  55 95
LCQ52_RS06090 NONE
LCQ52_RS06095 1333080 .. 1333102 + -20.6  -4.57581   AGGAGCTCACCTGAA           GCCACCGGCG TGT CGCCGGTGGC           TTTCTTGTTTCCCGT 100 34
LCQ52_RS06100 1333992 .. 1334017 +  -3.2  -4.30576   CAAATGTCTAGTGTA         ACCGAAGTCG CTGTGC CGACTTCTGA          TTTTGATGGTAACGC  62 213
LCQ52_RS06105 NONE
LCQ52_RS06110 NONE
LCQ52_RS06115 NONE
LCQ52_RS06120 NONE
LCQ52_RS06125 1335563 .. 1335586 +  -4.4  -3.48276   CAGGGCGAAGGGAAA          CCCCGGCTCA CATG TGGACCGTGG           TTATGTCGACGGGGA  52 405
LCQ52_RS06135 1336542 .. 1336571 +  -5.7   -2.7263   GGGCCGAAGGAGGTG       CCG-GCATGTTCCT GAA GGGAGAATGCGCGG       ATTTCCCCGACTCGT  50 11
LCQ52_RS06140 NONE
LCQ52_RS06145 NONE
LCQ52_RS06150 NONE
LCQ52_RS06155 NONE
LCQ52_RS06160 NONE
LCQ52_RS06165 1340296 .. 1340321 + -14.7  -5.19261   GATTGGCTGTTTGTG         GCCCGCACTGG GGAA TCGGTGCGGGC          TTTTTTCATGGATTT 100 46
LCQ52_RS06170 NONE
LCQ52_RS06175 NONE
LCQ52_RS06180 NONE
LCQ52_RS06185 NONE
LCQ52_RS06190 1343603 .. 1343625 + -11.3  -5.71983   CATGCAGGCATGAAA           CTCGTCCGA TTCGT TCGGGCGAG           TTTTTTTATCATTCG 100 49
LCQ52_RS06195 1348807 .. 1348840 + -15.3  -4.18018   GCGTGTGAACCCCCA     GGCCCTTCGCCAG CCTCTCCC CCGGCGAAGGGCC      TTTTCCATGCCCGGA 100 147
LCQ52_RS06200 1356791 .. 1356847 + -23.2  -3.06815   GTAAGGCCACGGTAG GCCAGTAGAAAAGGCCGGGCAGGAGAG CGGA TTCCCC-GCCCGGCCTTTTCTTTTGGC TCTGTTAAACCAGCT 100 37
LCQ52_RS06205 NONE
LCQ52_RS06210 NONE
LCQ52_RS06215 1359609 .. 1359625 +  -3.6  -4.00476   TTGCACTATGCATGT              CAACGG CTGCT CCGGTG              TTTCTGGTGGCTTTC  58 302
LCQ52_RS06225 NONE
LCQ52_RS06230 NONE
LCQ52_RS06235 NONE
LCQ52_RS06240 NONE
LCQ52_RS06245 NONE
LCQ52_RS06250 NONE
LCQ52_RS06255 NONE
LCQ52_RS06260 NONE
LCQ52_RS06265 NONE
LCQ52_RS06270 1370362 .. 1370383 +    -5  -3.02511   GGATGATGGGAGTCG           CCGCCGCC ATTGAA GGCGCTGG            TATTCCCCGAATGAA  50 85
LCQ52_RS06275 1371076 .. 1371110 + -16.4  -2.70932   CAAGCCCTGGCGCAT     CGACGGCGGGACCGCT TCC ATCGGTTCCGCCGTCA     TGCTTGAAAGGAGAA  90 49
LCQ52_RS06280 NONE
LCQ52_RS06285 NONE
LCQ52_RS06290 1375060 .. 1375075 +    -4  -2.84634   GTTCGTGGGGTGCGC              CGGC-AT CGG ATGGCCG              TATCATGGTGTCAAC  43 71
LCQ52_RS06295 NONE
LCQ52_RS06300 1376902 .. 1376919 +  -9.1  -3.14647   GGCGGCGATGCAGAA             CGCTTCG GATA CGAGGCG              TTCCATGTCGTGCGT  61 216
LCQ52_RS06310 1379177 .. 1379187 +  -8.2  -3.49114   ATTTCGCGGGGTGTC                 GGGC CGC GCCC                 TTCTGATGTGCTATC  65 264
         dcm 1380206 .. 1380216 +  -8.2  -3.84712   CCTGTCCGACTGATT                 CGCC CGA GGCG                 TTTCCTGTCCGATTG  71 28
LCQ52_RS06325 1381896 .. 1381909 +  -3.7  -4.19577   GGAGCGCTGCGCGCC               GCCGC CTTT GCTGC                TTCTTTTACGCATTA  63 404
LCQ52_RS06350 NONE
LCQ52_RS06355 1386949 .. 1386967 +    -3  -2.65264   CATCGGATCCTCGCG             GCCATGCT CTC GGCGTGCC             TGCTGTCCCTGCTCG  40 55
LCQ52_RS06360 NONE
LCQ52_RS06365 NONE
LCQ52_RS06370 1389965 .. 1389978 +  -9.5  -3.57144   GAATATGACCGATAC               GGCCG GTTC CGGCC                TTTCCAAGTGAGAAA  71 1
LCQ52_RS06375 1390221 .. 1390232 +  -3.6  -2.71364   TTCGACACCGATCCG                CGCG AGGA CGTG                 TAGTTCGAGGCATCC  43 11
LCQ52_RS06380 NONE
LCQ52_RS06385 1392920 .. 1392959 + -16.6  -4.58685   AACGACACGGATAAG  GGCCATGGAATCATCG GACGGCAA CGATGATTCCACGGCC   TTTTTCCAGGACTTT 100 49
LCQ52_RS06390 1393989 .. 1394028 + -14.6  -3.51924   TCAGGATTGTGATAG  GTGTACATGAATATGCGT TTTT ACATATATTCATGTACAC   TTATATGCATGAAGA  95 51
LCQ52_RS06395 NONE
LCQ52_RS06400 NONE
LCQ52_RS06405 1395875 .. 1395918 +   -17  -4.25056   CTCGGTGAGCGGTGT TGGTATACGCCAATATGC GCAAAGAA GCATGTTGGCGTATACCG TTTGTTCATCCGATC 100 33
LCQ52_RS06415 1397226 .. 1397243 + -12.7  -5.83211   CAGGAGCCATCGAAA             GCCTCGG TTCT CCGAGGC              TTTTTTATTTTCATC 100 32
LCQ52_RS06480 1413443 .. 1413455 +  -6.3  -3.45571   TTTCATGATTGCTAC                GGATA ACG TATCC                TTACTCTTTCCAGAG  56 482
LCQ52_RS06490 1414794 .. 1414813 +  -8.6  -4.18018   TTCGCTTGGGCTGCA            TGACGTTC TGCT GAACGTCG             TTTTCGCTCCAAGCG  77 187
LCQ52_RS06495 NONE
LCQ52_RS11115 NONE
LCQ52_RS06500 1417712 .. 1417768 + -14.5  -2.57564   GCATCAAACGGAACA GACCCACGCATCTAAGCGTTGCGGC ATCTGCC GTCGCAACACTTAGATACGTGAGGC GTTATCCGAAAATCA  81 98
LCQ52_RS06515 NONE
LCQ52_RS06520 1420403 .. 1420417 +  -2.8  -3.80858   GTATGGAGGATCGAT               GTAGAT GCA ATCCAC               TTTGCCTTCGTATTC  54 423
        istB 1424189 .. 1424215 +  -2.2  -3.72576   ACACCTCTTCCGATA         CCGGCATG CACATCGTCAC CCTGCCGG         TTTCCTGCGCGGCGG  50 114
LCQ52_RS06545 1425045 .. 1425073 + -17.7  -4.36914   ATCCACCTGCGCGAA        CCGTGATTATACT TTT AGTATAATCACGG        TTTTCTACAGGGCGG 100 514
LCQ52_RS06570 NONE
LCQ52_RS06575 1429810 .. 1429836 + -10.8  -3.40403   ACCCGTCAACGCCCG         CGCAGCGAAACC CGT GGTTTCGACGCG         TTCTCATGACGGAAC  73 305
LCQ52_RS06585 NONE
LCQ52_RS06590 1431756 .. 1431780 + -18.6  -4.54727   CACCAACGACCCACC          GGCCCCGCGA TTTTT TCGCGGGGCC          TTTTCATTTCCCGCG 100 121
LCQ52_RS06595 NONE
LCQ52_RS06600 NONE
LCQ52_RS06605 NONE
LCQ52_RS06610 NONE
        istA 1437535 .. 1437548 +  -2.3  -3.03124   CTTCATCGCCGGCCA               CGACG ACCT CGTCC                TGTTCGGCCCTCCCG  42 372
LCQ52_RS06655 NONE
LCQ52_RS06660 1447950 .. 1448008 +   -22  -3.68351   GGTTCGGTGCGCAAG --GGAAAGGGGTGGCAGGCCGGATCCGA CCTCA TTGGATCCGGCCTGCCACCCCGTTCTGG TTTCCATGGTGCGCG 100 81
LCQ52_RS06705 1458179 .. 1458194 +  -6.8  -3.17319   GCAATCCCACCGGCT              GTCCGG CCAT TCGGAC               TGTTCGTAGATTCCA  53 430
LCQ52_RS06720 1459672 .. 1459725 + -15.6  -4.04318   GGTCCTGATTCTGAA CCGCACC-CCGATTGTTGGA-CTGAA GTAA TTCAGATTCGATGATCGGAGGTGCGG TTTCTCATGTGTAGG 100 62
LCQ52_RS06725 NONE
LCQ52_RS06730 1461536 .. 1461546 +  -3.2  -4.62783   CTTCGACCACACGCT                 CAGG CTG CTTG                 TTTTTCAGATCGATC  69 460
        sepH 1466105 .. 1466128 +    -6  -3.65902   CACCATGCCGTGGTC          GGCTACGATGA CGA TCAGCGT-GCC          TTTGGGTGCGCTGCG  57 434
LCQ52_RS06760 1469997 .. 1470011 + -11.4  -3.85698   GAGCCGTAAAGCAAA               CACCCC AGT GGGGTG               TTTGTAGGCGAGGAG  82 68
LCQ52_RS06765 1471187 .. 1471203 +  -4.3  -3.53012   AGCACGACCGTGGCT              CCGATAC GGC GTGCCGG              TTTACCCGCACCGGC  51 325
LCQ52_RS06800 1484316 .. 1484332 +  -5.1  -3.82031   CCGCGTAACCGGGGC              CATGTAC ACT GAACATG              TTTAGTCGTGATTAA  61 118
LCQ52_RS06805 1486649 .. 1486683 + -19.5  -4.37247   CGTGTGAGATTTGAA    TGAGGCTCCCTCTGTC TTCA GAC-GAGGGAGCCTCA     TTTGTTAATTACTTT 100 34
LCQ52_RS06815 1488210 .. 1488224 + -11.4  -3.86015   GAGCCGTTAAGCGAA               CAGCCC AGT GGGCTG               TTTGTAGGCGAGGTG  82 83
LCQ52_RS06830 1490786 .. 1490821 + -10.4  -2.50816   TGCTGATGAACCGCA    TAGAAAATGGCTCCCC GTGT GGGGAGCCATGAGCTA     GTTACTAACTAGCGA  65 281
        rnpB 1495579 .. 1495598 +  -6.4  -4.68103   GGCCCAATTCCCATG            CGGCATCT TCAA AGATGCCA             TTTTGTTCAGCTTCG  81 177
LCQ52_RS06885 1503884 .. 1503900 +  -2.1  -4.54449   CCATCCCATCTGTTT              GCGGGCG AGT CGCTTGG              TTTTCTGTGCGATGT  68 236
LCQ52_RS06900 1507043 .. 1507057 + -11.4  -3.35867   TGAGGTGCTATGGAA               TCGGCC TGC GGCCGA               TTCATTCACCGTTGC  75 38
LCQ52_RS06920 NONE
LCQ52_RS06925 1512458 .. 1512481 +  -7.4  -3.63073   GAGCGGGCCGATCTG          CCGGCGCGGCT GTA AGTCGT-CCGG          TTGTTGAGCCGTATC  65 11
LCQ52_RS06930 1513184 .. 1513195 +  -4.4  -3.25942   GCAAACACTGGTAGG                CTTG AGCA CAAG                 TTGGTATGCCGGCAT  49 56
LCQ52_RS06935 1515367 .. 1515406 +  -6.4   -4.1822   ACGGTGGCCGGCACA  TCATTGG-TGGCTCCCCTC CGT GAGGGAAGCCAACCGCTCA  TTTATTCCAGTGCCG  67 44
LCQ52_RS06980 1526532 .. 1526579 + -12.2  -2.91276   TCGTGAGAAATCTGC TGTGGGACAACATTCATGTCCA TCGA TTGATGTTGATGTTGTCCCACA ATTTGTGGGACAACA  75 148
LCQ52_RS07015 1535756 .. 1535808 + -12.6  -3.31322   GAACAGCAGGGTCTG CTGCCAGCCGGCTTCGGGGACGGCG AGCT CGCGTTCCGGGAATCCGGC-GGCAG TTGTGCCGGCTTGCG  74 239
LCQ52_RS07115 1558604 .. 1558615 +  -4.4  -3.14931   ACAGAGTCGGCATTA                CAGT AGCA ACTG                 TTGGTAAACAATGGC  47 193
         gap 1559782 .. 1559808 + -15.9  -3.21099   TGAGAACTAAGCTGT         GAGACCCCCGC CTTGT GCGGGGGTTTC         TTCGTAGTAGAACGG 100 72
        ybaK 1560335 .. 1560381 + -24.6  -3.71848   ACCAATCGGCACGTG GTGACCGTTCTTGGCTCCCCTC ACG GAGGGGAGCCAAGAACGACTAC TTCTTCCTGCGCAAC 100 22
LCQ52_RS07135 1562628 .. 1562653 + -13.3  -5.39755   AGTAGTTCTGTTACG         CTGGCTCCCCT CCAG AGGGGAGCCAA          TTTTTTATCCTTATG 100 36
LCQ52_RS07140 1563905 .. 1563939 + -27.4  -3.66727   TTCTTATGGAACGCT     CAAGGCCCGTCTGATG ATA CATCAGACGGGCCTTG     TTGTATATGTCGTTA 100 244
LCQ52_RS07155 NONE
LCQ52_RS07160 1567918 .. 1567943 +  -9.7  -2.90763   GCGAAGCGAAACTGA         GGGTGGTCTTT CGAG ATGGACCACCC          TCTGTCACCTGTGGC  65 74
LCQ52_RS07175 NONE
LCQ52_RS07180 1577320 .. 1577339 + -13.6  -4.35042   AGCGAAGTAACCTAA            GCTCCCTC TGAT GAGGGAGC             TTCTTTTCTACTAAG 100 31
LCQ52_RS07185 1577978 .. 1578021 +    -5   -3.7732   GGTGGGCGCGGTGTT GCTGCTGTTCGCGCGGGTCG GGCA CGGGCAGGGAGGCCAGCAGC TTCTTGGTGTACGGG  58 119
LCQ52_RS07205 1583658 .. 1583680 +  -6.2  -3.26428   ACTCGTCCTTCTCGC           CGGCCTGCTT GAC GATCAGGTCG           TTGACTTCCTTGTTG  52 294
LCQ52_RS07225 1589089 .. 1589112 +  -6.7  -2.63596   CCGCATGGAAGATGC          GGTCTCGGA GACAAA TCTGAGGCC           TCATCTCCCATGCCC  51 111
LCQ52_RS07235 NONE
LCQ52_RS07240 1592486 .. 1592525 + -12.2  -4.08064   AAAACCACCTATTTT  CCCGATGGCTTTGCCG TCCTATAC CGGCAAAGCCATCCTG   TTTTAAAAAGGAGTT  91 44
LCQ52_RS07245 1592989 .. 1593000 +  -4.4  -2.81312   TAGTCATCATCCATT                GATC GATC GATC                 TGTCATACGTCCATT  45 81
LCQ52_RS07250 1593133 .. 1593145 +  -2.6  -3.30124   ATTTTCAATGACTTC                GGTG CTGTT CGCC                TTCTAGGCCATCGCC  43 7
LCQ52_RS07255 1593638 .. 1593671 + -14.8  -5.23316   ATCGACTGACCGCAA     CCGGTGAGATTCTCC GAACA GGA-AATCTCACCGG     TTTTTTCATATGGTG 100 143
LCQ52_RS07260 1595116 .. 1595130 +  -2.8  -3.32946   CCGCCGCATGCGCAT               TGCG CACCCAC CGCA               TGTTCTCATTAAGGA  47 48
LCQ52_RS07265 1596422 .. 1596458 + -25.3  -3.08438   TCGTGATAACGAATA    GGCAAGGTCCGACGGAA AAC TCCCGTCGGACCTTGCC    TATTCCCGTCTCATG 100 52
LCQ52_RS07330 NONE
LCQ52_RS07335 NONE
LCQ52_RS07340 1620826 .. 1620851 + -11.9  -3.81951   AGGATTAGTGTGAAA         GCCTCTGAATC AACC GGTTCAGGGGC          TTTACTCATATCCAC  86 97
LCQ52_RS07345 NONE
LCQ52_RS07350 1621492 .. 1621506 +  -4.2  -4.83169   ACGTGCGTAGTCTGC               TGGCCA AGT TGGCGA               TTTTTCTGCCCCCAT  77 334
LCQ52_RS07420 NONE
        serA 1639875 .. 1639899 + -18.7  -3.77196   TCGATTGATATGAAA          GAGACCCGTCA TCA TGACGGGTCTC          TTTCATAAGTGCTGG 100 53
        lexA 1641767 .. 1641801 + -16.5  -3.02829   ATAGTCACGCACAGC     TTACGAAACCCCGGC CTCGC GCCGGGGTTTCGTCG     TATTCAGACCATATC 100 91
LCQ52_RS07445 1642906 .. 1642939 +    -6  -5.24129   CAAAGGTAGGTCGAG     TC-TTGTGCGGTGCG AAAGG CGCTCCGTACAGCGA     TTTTTTATCAGAAGC  90 126
LCQ52_RS07460 NONE
LCQ52_RS07465 NONE
LCQ52_RS07470 1651662 .. 1651685 +  -3.9  -3.86194   GATCGGTCGAATGTG          GGTCAATGGT TCCAC GCCAT-GACC          TTTGTCGGCCAGCTT  56 183
LCQ52_RS07485 1654831 .. 1654844 +  -8.1   -2.9583   AGGTAGATTAACAGT               CTCGC TAAG GCGAG                TCCTTTGCCTACTTC  59 107
LCQ52_RS07530 1663206 .. 1663237 + -17.4  -3.66787   GTCCAGATACGCAAA      GAGGGAACTCTCCG TCAT TGGAGGGTTCCCTC       TTCTATATGCTTTCG 100 51
LCQ52_RS07555 1671674 .. 1671705 +  -6.6  -3.53444   ACGCGGTGATGTACG      GCATCATGACCGGCA CGG TGTTGG-CGTGGTGC      TTTGCAAGCGCCTCG  57 504
LCQ52_RS07575 1678240 .. 1678255 +  -6.1  -2.62184   AAATTCAGTGCGACG              CCGGT ACCGAA ACCGG               TCATCTCCAAAAGCA  49 377
LCQ52_RS07630 1688838 .. 1688861 +  -2.4   -5.0538   AGTAGTTTCAGTTCC          CTCTGATGAG GGAG CTCATAACAG           TTTTTTCCAATAAGA  74 36
        thiC 1691670 .. 1691696 + -16.6   -3.7941   CAGGAGTAAACCTCT         CTGGCTCCCCTC TCT GAGGGGAGCCAA         TTATTATGCCCGGTG 100 32
        thiD 1692978 .. 1692992 +  -3.5  -2.69151   TCTGGAAGTATCGCT               GAGTC CTACT GGCTC               TCCTCTCTGAGGGGA  42 24
LCQ52_RS07650 1693408 .. 1693442 +  -5.1  -3.66772   AAGCAGGCGAAGTAG    CAAAGCAT-CGCTTCC ACCA GCAAGGGCATGCTTTG     TTATTACACGTTTCA  58 26
LCQ52_RS07655 1695353 .. 1695384 + -12.2   -4.9645   CTGATAATGTCCATT      CGGCGTCTTGCGCG GTGA CATGCAGGGCGCCG       TTTTGTTGTTCTAGT 100 67
LCQ52_RS07665 NONE
LCQ52_RS07670 NONE
LCQ52_RS07675 1698911 .. 1698933 + -14.9   -4.2349   CACACGATTTCTCAA           GGCCTCCGT TCAGC ACGGAGGCC           TTTTGCGTGTCGAAC 100 49
LCQ52_RS07680 NONE
LCQ52_RS07685 1702014 .. 1702033 + -13.6  -5.60993   GGAGTAGCTCTCTCA            CCTCCCTC TGAC GAGGGAGG             TTTTTTTGTGCGCCC 100 34
LCQ52_RS07690 1703103 .. 1703114 +  -2.2  -3.73402   GCGTGTGGCAAACCG                GCTT TCCC GAGC                 TTTCATAGGGAATGT  50 145
LCQ52_RS07695 1704347 .. 1704374 + -14.2  -4.70659   GAATCTACGCAAAAA        TGCGTCCTTCCC ATGA GGAAAGGACGCA         TTTTTGCGTATCGGC 100 60
LCQ52_RS07700 1706057 .. 1706073 +    -3  -4.18018   TGTCCGGATTGTACA              GATGGT CGGCA ATCATC              TTTTCAGTCACACGG  61 384
LCQ52_RS07750 1717228 .. 1717249 +  -8.7  -3.14522   CCTTCAGCCAATTCC           CGCTCCTGA ACGT TCAGGAGCA            TTCAGTATGCATTAC  63 49
LCQ52_RS07760 NONE
LCQ52_RS07765 1721035 .. 1721072 + -16.4   -3.1552   TGACCATGAATCGCG   CATAAGCGGCCTTGGG CATTAT CTCAAGGCCGCTTTTG    TATTGCTGAATCACC 100 38
LCQ52_RS07775 1722976 .. 1723029 + -13.1  -3.53012   AGTGGCTGATGCCGG TCTTGGCCTGCAGCACAATGCCTGTG GCG CACAGGCCG-GTGCCGCAGGACAGGG TTTCACCGCAGCCAC  76 150
        murI 1724643 .. 1724659 +  -3.7  -3.07622   GTCACGCAAATTGCT              GAACG TATGAGC CGTTC              TTGGCTCCCCTCTCT  45 16
LCQ52_RS07790 1725637 .. 1725655 +  -8.1   -3.1355   CATAGCGATAGTGAA             GTCCCTC GCTTG GAGGGGC             TTCACTATCGATGGA  60 36
LCQ52_RS11120 NONE
LCQ52_RS11125 1728069 .. 1728104 + -13.3  -3.31144   CACATAAACAGATAA    GGCGTGCGCCATCAA GACCGA TCGATGACGCACGCC     TTATGCAGCTCAGAC  87 77
LCQ52_RS07850 1734205 .. 1734217 +  -4.1  -3.28712   GATGACCTGTTCGGC                GTCAT GGC ATGGC                TTGTAGCCGCCGAAA  48 181
LCQ52_RS07860 1737416 .. 1737443 +  -4.8  -3.56092   TCGGCGGCGCGCTGC        TTGACGCGGCGGG CAC CCTGCAG-GTCGA        TTTCCAGAATCGTGG  55 274
LCQ52_RS07895 NONE
        fetB 1747033 .. 1747049 +  -3.5  -3.96892   GTCGGCCCCTTCCAG              TCCACGC TTT GCGCGGC              TTTGTCATCGCCGTT  58 517
LCQ52_RS07955 NONE
LCQ52_RS07975 1768125 .. 1768143 + -10.2  -3.21726   CTATAGGACCGGACC             GCTCGGCG ACC CGCCAAGC             TTCAGTATTCTCCCA  71 35
LCQ52_RS07980 NONE
LCQ52_RS07985 1770189 .. 1770199 +  -6.8  -4.59853   GACGTTCTGACTCGG                 GCAC CTT GTGC                 TTTTTCAGCGCTTCG  78 480
LCQ52_RS08005 1773958 .. 1774000 +  -6.3  -2.70932   GTTCATCCATAAGTA ACC-T-GTAGTGACCCCCCTC ATA GAGGGGAGCCACTACTACGGC TACTTCAGCGACGGC  50 25
LCQ52_RS08015 1775986 .. 1776017 + -24.6   -4.1721   CTCAAAGAACCAGAA      CGCAGAATCCCGGC ACGG GCCGGGATTCTGCG       TTTTCGCCTATCAGT 100 93
LCQ52_RS08020 1778503 .. 1778522 +  -3.5  -2.82623   AAACAGCGCAGACAG            CACCGGT TGCTAT GCTGGTG             TGGTTATACGAAAGA  43 47
LCQ52_RS08025 1778890 .. 1778936 + -29.9  -3.01712   TCCCGTAGCTTGATA TGAGTAATGGCGGTTGGAATC AGTCC GATTCCAACCGCCATTACTCA TATTCGCCCAGCGAG 100 57
LCQ52_RS08035 1780158 .. 1780189 + -23.2  -5.13527   CGGGATGCGACACGC      CGGCCGTGTACATG AGTT CATGTACACGGCCG       TTTTCTTTGTTGCTT 100 119
LCQ52_RS08040 1780945 .. 1780988 + -24.2  -3.12327   TCTTTTTCGGATTGC CCGATAAGGGGCGTATAACA ACGG TGTTATACGCCCCTTATCTG TATTCAGTGTCAGGC 100 61
LCQ52_RS08050 1783891 .. 1783947 + -18.3  -3.18768   GAGAAAGAAAGCTTT GGCGGG--CAGTGCCGGCTGCTGTGA CCTTGCCA TCACAGCAGCCGG-GCTGATCCCGCC TATTCAGTTATGGTG 100 140
LCQ52_RS08145 1806403 .. 1806429 + -19.6  -3.58343   CCCGCAAAAAGCAAA         TGGCCCTTGGAA TTA TTCCAAGGGCCA         TTTGCGGCTACTAGC 100 347
LCQ52_RS08160 1811446 .. 1811485 +   -18  -3.98009   CTCCCCTCAGTCGCC  TACGGCGACAGCTCCCCTC AGC GAGGGGAGC-GTCGTCATA  TTTATGCCGTTTTCT 100 118
LCQ52_RS08185 1819022 .. 1819041 + -13.6  -3.81951   TCAGCTTCGCTGACA            GCTCCCCT GTCA AGGGGAGC             TTTGCTGGTATGCGC  93 149
LCQ52_RS08195 1822839 .. 1822889 +   -17  -3.09823   TGCTAACGCACGCCT CGGTGATGGGCTTGCAGGGAGGAA TTC TTTATTCCTGCAACCCCATCACCA TCTACTTTTCGCGGA 100 62
LCQ52_RS08225 1828529 .. 1828548 + -13.6  -2.76492   CCAGAATACAAAAAA            GGGACTCC CGAA GGAGTCCC             CTTTCAGCTCAATCA  79 68
LCQ52_RS08245 NONE
LCQ52_RS08250 1833501 .. 1833519 +  -5.2  -2.55074   CGTCGACAAGATCGT             CGAAACGG TTC CTGTTCCG             TGAGTTCCGATTCCG  46 4
LCQ52_RS08255 NONE
LCQ52_RS08260 NONE
LCQ52_RS08265 NONE
LCQ52_RS08270 NONE
LCQ52_RS08275 1837937 .. 1837957 +  -6.9  -4.20531   TTGGTCGTTCTGGCT            GGACAAG CATGAGT CTTGTCC            TTTTAGCTGGATATA  70 260
LCQ52_RS08280 NONE
LCQ52_RS08285 1840044 .. 1840057 +  -2.4  -2.70476   GGAGTCATGAGATAT               TCCA ACTCGA TGGA                CTTATGATTCCCCAT  39 176
LCQ52_RS08290 1840565 .. 1840578 +  -3.7  -3.56366   AATCACCGCAGAGAC               GCGGC TAGC GCCAC                TTTCCCGGGATTGTT  51 65
        purB NONE
LCQ52_RS08305 1845525 .. 1845542 +  -5.6  -2.86477   GCCATGAAGTGGCTT             GACAAG CATAAT CTTGTC              TGATTCGTCTATTTT  49 5
LCQ52_RS08310 1846016 .. 1846040 + -17.9  -5.22006   ATTACTGACGACAAA          GACCCCGACCG AGA TGGTCGGGGTC          TTTTTGTTGTGGTGC 100 69
        serB NONE
LCQ52_RS08350 1855868 .. 1855880 +  -3.3  -2.68259   CTTCGCTTCCGAGTA                GATCC CAA GGACC                TGATCTAATCGTCTT  40 5
LCQ52_RS08355 NONE
         fmt 1857699 .. 1857731 + -23.6  -3.63805   CGGAAGCACAGTAAA      GGCCCGGCATCTTC ATAAA GAAGATGCCGGGCC      TTTCAGCTATGCAAT 100 63
        rpoZ 1860249 .. 1860280 +   -13  -4.55295   GCGAATAAGACGCAA      GGCTCGCGCC-ACCG CGC TGGTTGGCACGAGCC      TTTATTTATGCCCGC 100 173
        metK 1861612 .. 1861657 + -33.7  -2.93858   TGATATCGACTAGTC CAAGAAGGGGTGTTTCCGCTG ATGC CAGCGGAAACACCCCTTCTTG TATATGAGTCTAGTG 100 38
LCQ52_RS08405 NONE
LCQ52_RS08410 1872939 .. 1872977 +  -2.7  -3.88001   GCTCACAGGCGTGTA  GGCAAT-ATTTTGCAGTAC CTG GTA-TGCAAAATGAATGTC  TTCGTTTTTGTCGCG  54 183
LCQ52_RS08425 1878695 .. 1878741 + -18.9  -2.52464   TGCGGTGTCCTGGAA AGACGAATGCCGTCAACGAGGT TGGT GCC-CGTTGGCGGCATTCGTCA TACGTTGGCCGAACC 100 59
LCQ52_RS08485 1891742 .. 1891761 +  -2.7  -3.07816   TCCCCTCCCCCTTAT            GGGACGG ATACCG CTGACCC             TTCCGTAAATCGCGC  43 9
LCQ52_RS08510 NONE
LCQ52_RS08515 1903762 .. 1903799 + -27.9  -3.40403   CACCAGAACGAATAA   GGCGGGTGTCCCGTTCC ATAC GGAATGGGACACCCGCC    TTGTCGTAGGCCGCA 100 70
        xseA NONE
LCQ52_RS08550 1916162 .. 1916182 +  -6.1  -3.50853   TCCCGCGGCTCGCAC            CTGAGTCCG GAC TGGACTGAG            TTCTGCTTCCCGGCA  57 60
LCQ52_RS08555 1916785 .. 1916809 + -18.6  -4.08557   GACTGAATAAGCTGA          GGCCGGGTGC AAGTC GCACCCGGCC          TTGTTGTTTCGCGGG 100 35
LCQ52_RS08585 1922416 .. 1922446 +  -8.1  -3.13403   GGTGACGCGGCCCGC       GCCAGCCGGGGCG GAAAG CGCTACGGTCGGC       TCTTCGTCGGAGCCC  58 506
LCQ52_RS08600 1925470 .. 1925499 + -19.5  -3.65522   CCGTTTGAGGTCTGA       TTTCAGCTCCCCT CCAG AGGGGAGCTGAAA        TTATTCCGCTGAATC 100 26
LCQ52_RS08610 1926655 .. 1926685 +  -3.3   -3.5393   CCTGAACGGCGAGCA       GAATCGCCCAT TCCCAGAAC ATGGACGGTTC       TTTAAGCAACGTGGT  49 64
LCQ52_RS08615 1927953 .. 1927992 +  -5.6  -3.64703   CACCGCTATCGACTC  CGGTCTCGGCTTAGCGAA CGGG TCCACAAAGCCCAGACTG   TTTCCATCCCCAAGC  58 12
LCQ52_RS08630 NONE
        dapD 1935999 .. 1936027 + -13.1  -3.85698   CTGTACATATAGAAA        GCGCCTCACTGGA ATC TCCAGCGAAGCGC        TTTCTCAAACCAACA  90 194
LCQ52_RS08655 1941935 .. 1941971 + -18.9  -4.79826   TTATGTAAGAGAAAA    CCGCTGTGTTTGCCT CGATTAC AGGCGAACACAGCGG    TTTTTCATGATGTAT 100 47
LCQ52_RS08715 1958530 .. 1958573 + -20.4  -2.56914   GCCGTCAGCGGAGCT GACTGAGGGTGGTTGCCGGA AATC TCCGATAACCACCCTCAGCC TCACTTCGTGAGGTA 100 64
LCQ52_RS08770 NONE
LCQ52_RS08775 NONE
LCQ52_RS08780 1970550 .. 1970575 + -15.5   -4.8622   ACCTATTCGCTGAAA         GCGGGATATCG ACAT CGGTATCCCGC          TTTTTCATTGGCCGC 100 52
LCQ52_RS08825 1982671 .. 1982684 +  -2.3  -3.17075   GCGGTTCAGAGCCAA               CGTGG AATC CCACA                TTGCATTGGAGCGAG  43 475
LCQ52_RS08840 NONE
LCQ52_RS08845 1986129 .. 1986142 +  -5.2  -4.07562   AAAAACCGCACCAGA               CCGG CAAAGT CCGG                TTTATATCCGGTTTC  63 153
LCQ52_RS08895 NONE
LCQ52_RS08900 1996871 .. 1996890 +  -3.5  -3.28712   CGCGGTAGGCGCTGC            CTTCCAG GAAACG CTGGTAG             TTGTAGCGGGCCGGC  46 142
LCQ52_RS08910 1999519 .. 1999540 + -14.5  -3.14132   CAAAAGAACAAAAAA           GCTCCTGAC ATTT GTCAGGAGC            TTGGTGGCGACCCCG  91 164
        ettA 2001680 .. 2001698 + -13.8  -3.63895   CTTTATACGTCGAAA             GCCGTCCC TCA GGGGCGGC             TTTCCCATAATTGCC  89 69
LCQ52_RS08925 2002920 .. 2002939 +   -15  -3.31799   TCGGCTACGCCTACA            GCCCCCTC GTCA GAGGGGGC             TTATCACGGATTATC  95 91
LCQ52_RS08990 2018707 .. 2018736 +    -8  -3.29649   GCCCTCTCTGCTTAT      GCA--AGCTCCCTC TGAT GAGGGAGCTAATGC       TTACTGTCATCGACT  62 53
LCQ52_RS09000 2022144 .. 2022162 + -13.1   -3.4759   GACGGATATGCAAAA             GCCCCGC ACAAG GCGGGGC             TTCATTGTGGTGGCT  85 520
        trmB NONE
LCQ52_RS09025 2024944 .. 2024968 + -11.4   -4.4261   GGGTACTTCACTAAA          GACCACGGTC ATAGC GACCGAGGTC          TTTTCGTATTCGCGG  93 33
LCQ52_RS09030 NONE
LCQ52_RS09035 2026522 .. 2026536 + -11.4  -3.16039   GCGAAACACACAGCA               TCGGCC ACA GGCCGA               TTCCTACAGCTGCTT  74 186
LCQ52_RS09055 2029386 .. 2029407 + -15.9  -3.76775   GGGATATAAATTGAA           GAGGCTCCC TGGC GGGAGCCTC            TTTCCGTATATTCGG 100 44
        serC 2035060 .. 2035090 + -16.2  -3.14602   CCGATTGAATAAATC       GTAGGGAGAGGTGT TTG ACGCCCCTCCCTAC       TCTTACTACAGTGCA 100 105
LCQ52_RS09085 2035454 .. 2035480 + -19.6   -3.3782   GCTCATCAAACAGCA         TTGGTGGCATGC AAG GCATGCCACCAA         TTCCTTACCTCACTG 100 114
        phoU 2037622 .. 2037648 + -12.3  -5.61689   GAGGATGCCCGAAAG        CGGCGATCCGGC TACG GCTGGA-CGCCG         TTTTTTGTTGCTTTT 100 99
LCQ52_RS09115 2041704 .. 2041731 +   -15  -5.02715   AGCCCGACAACTGGA        CCGGATTGTTGA GAAA TCAGCAATCCGG         TTTTTCGTTTCCTGT 100 33
LCQ52_RS09120 NONE
LCQ52_RS09125 NONE
LCQ52_RS09130 2046510 .. 2046522 +  -4.7  -2.62983   ACCAATACAGCCGAT                ACGCC TAC GGCGC                TCATATAGCCGTACA  43 401
LCQ52_RS09150 NONE
LCQ52_RS09155 2052543 .. 2052578 + -20.6  -2.64616   ATCGTGTGATGAACG    ACAGATGAGCTCCCTC ATCA GAGGGAGCTCATCTGC     TCATATCACTCCGCG 100 32
LCQ52_RS09210 2066397 .. 2066435 + -10.3  -3.14051   AGCGTGACGTCGAGC  CGCGCATTGAGCGATGCGA GCA TCGCA-CGCCCC-TGCGCG  TATTCCTGCGGGTAC  64 442
LCQ52_RS09225 NONE
         pgm 2073058 .. 2073092 + -15.9  -5.41143   ACCGCAACTAATAAG     GCTCTGCATTGGATT CATAC AATCCACTGCAGAGC     TTTTTTTAGCGCATA 100 63
LCQ52_RS09240 NONE
LCQ52_RS09245 2077319 .. 2077362 +   -27  -2.83715   AGACTCCCCTAATGC GCGCGAAGGTCCTCATCG ACGTAAAC CGATGAGGACCTTCGCGC TGTCGTCATGATCCG 100 94
LCQ52_RS09255 2078884 .. 2078904 +  -2.6  -4.52589   GCTTGGCCATCTCCT           CGTCCCATAC CTC GT-TGGG-CG           TTTTGTATCCGAGGA  65 136
        rpiA 2080828 .. 2080856 + -18.2  -3.92324   ACTAAGCTTTTCCAA        GCCCGCATCTGC ACATC GCAGGTGCGGGC        TTTACTGTTGCCCGA 100 53
LCQ52_RS09280 2083547 .. 2083566 +  -3.5  -2.79831   GCCCTGAGATATGCC            TCAGGCG GTAAGA CGCTTGG             TCTCCTCGACGTTGC  43 40
LCQ52_RS09310 2091948 .. 2091978 +  -7.5  -2.57564   GATCGATGGTGGTCA      GCGCCGGCA-CCGA GTAC TCGGCTTCCGGCAC       GTTATCGAAGCCTAC  51 215
        truA 2100150 .. 2100177 + -15.6   -3.6215   GAAAACAACGCAAAA        GGGCTGGAACCC AAAC GGATTCCAGCCC         TTTCAGCTAGCTTAG 100 48
LCQ52_RS09490 2116700 .. 2116731 + -15.1  -3.49951   CACCACATATGCAAA      GGAGCCCGGCCCC TGTAAT GGGATCGGGCTCC       TTGTGTCGCGCTATG  95 87
LCQ52_RS09500 2121183 .. 2121197 +  -9.2  -2.91695   GACGATATCTGTGGT               GCTGCG GTA CGCGGC               TGATTTCCGCCTAGG  62 8
        glgX 2131326 .. 2131361 + -27.8  -2.80816   AGCGCGACACAAACA    CAAAGGCTCTCCGCGG AATT CCGCGGAGAGCCTTTG     TATGCTCGGTACAGG 100 55
        dinB 2142309 .. 2142336 +  -3.5  -3.90112   GGGCCAGGGATAATC       TGGCCG-AT-CTG CTTG CGGTATTCGGCCA        TTTCCTTGACCAGCC  56 383
LCQ52_RS09630 2148030 .. 2148056 +  -2.9   -3.1552   TTACGTCTGCCGTCT         CGCTCGGCCAT GACTA ATCGCTGATCG         TGTTCCTCGGTGAGG  43 9
LCQ52_RS09635 2148239 .. 2148295 +   -18  -4.65895   ATTTCGGCCTCTTCC GCCCTGCTGCCGCCGTCAGTGAGTCA CAAGA TGGCTCGGTGACGACGATGGCAGGGC TTTTTACGTCGGCAC 100 59
LCQ52_RS09655 2152502 .. 2152513 +  -2.2  -3.09193   GAAATATGACTTTGT                TGGA GGAA TCCG                 TTGCCTACCTATCAT  42 177
LCQ52_RS09660 2152865 .. 2152888 + -15.4  -4.67942   TTACGAAAAACTTCA          GGTCACCATG GTTG CATGGTGACC           TTTTCGTTTATTAAG 100 191
LCQ52_RS09665 2153533 .. 2153570 + -27.3  -3.01712   GGCCTTCGGCCGATA   CTGTGTTTTCCGCAGCC TGTC GGCTGCGGAAAACACAG    TGTTGGGGCGCACAG 100 52
LCQ52_RS09735 2176903 .. 2176914 +  -5.8  -2.57244   GCTCGGTATCGTTGT                CCAG AGCA CTGG                 TGGGTTCGTCCATAA  46 310
LCQ52_RS09780 NONE
LCQ52_RS09830 2206298 .. 2206327 + -15.7  -3.75378   CAGCACTCCCACATC       GGCGGTGCGGACC GTAT GGTCCGTGCCGTC        TTGTGTTCTCAGGAT 100 75
LCQ52_RS09840 2209443 .. 2209453 +  -5.4   -2.5369   GCGACGCTACACTAG                 TGAC TAT GTCA                 GATTTTCTCGAACTT  46 26
LCQ52_RS09845 2210367 .. 2210385 +  -7.4  -2.62616   ACAGCCTAGCGGGCC             GAATCAGG CTG CCTGAATC             TCGTGTACGCCATCG  54 129
LCQ52_RS09935 2231800 .. 2231816 + -10.1  -3.09516   AGCCCGCCGAAGAAG              CTGGCCA GCG TGGCCGG              TTCGGTCATCGAAGC  62 310
LCQ52_RS09950 2235282 .. 2235312 +  -7.4  -3.56162   GCAGACCAGCGAGTT       CCGCCGAGTCGGCG ATG TGTCTCTTCGGCGG       TTGATTTAGGATTTT  62 451
LCQ52_RS09980 NONE
LCQ52_RS09985 NONE
LCQ52_RS09990 NONE
LCQ52_RS09995 2248143 .. 2248167 +  -2.2  -2.71791   GAACGGCCGAATTAA         TCGAAGTCG GCACCCAA CG-CTTCGA          GTTTGCCGCGGAAGT  39 75
LCQ52_RS10005 2251238 .. 2251251 +  -4.5  -4.57341   GAATCACGGCCCGTA               CAGGC TGTT GCTTG                TTTTTGGAGCCGATT  71 203
LCQ52_RS10020 2254405 .. 2254415 +  -8.2  -3.53091   CAGGGCCTGCTGAAA                 GCCC ACC GGGC                 TTTCAGCAGGCCGAT  65 161
LCQ52_RS10035 2257763 .. 2257779 +  -2.1  -3.88291   AAATCCCGCGAGGTA              TCCGTCG AGA CGCGGGA              TTTCTGCCACTAATA  52 79
LCQ52_RS10045 2261930 .. 2261968 + -24.1  -3.61398   GACTGAGGGTGGTTA  CGATGCCCGGC-TCCTCT TTCG AGAGGATGCCGGGCATCG   TTGTTCAGCGCGCAA 100 72
LCQ52_RS10050 2263227 .. 2263245 +    -3  -2.90941   TCAGAAGGTTCAACC             GCTTGTCT ACT AGACCCGC             ATTTCCTGATTCATC  42 13
LCQ52_RS10055 2264261 .. 2264290 +  -9.1   -4.6313   CCGCGAGCGGCCCTT       GCGCCGACAGGCG CTTT CGCGGTTCGGCGC        TTCTTTTCTTTTACC  89 236
         upp 2266542 .. 2266554 +  -2.6   -2.7795   GGCGACGCCGGTGAC                CGTC TCTAT GGCG                TAATTGACTGATTTC  39 2
        rlmH 2267175 .. 2267185 +  -6.8  -3.35088   CTCATGGGGCGGTAT                 GCCA AAA TGGC                 TTAATTCCGCGGTTT  58 108
LCQ52_RS10095 2275247 .. 2275257 +  -4.6  -2.88634   GCACTTCTGCCGGGA                 GCGT AAG GCGC                 GTTCTTGGTTCCCCT  46 20
LCQ52_RS10115 NONE
LCQ52_RS10125 NONE
LCQ52_RS10130 2282443 .. 2282501 +   -15  -4.41616   CGTGATTCGCGTCAG -AC--GAATAAGCGTTGTCCCGTCTCTTC CTCC GAAGAGGCGGGACAACGCTTATTCCTGCG TTTATTTCCGCACAT 100 85
LCQ52_RS10175 NONE
LCQ52_RS10180 NONE
LCQ52_RS10185 NONE
LCQ52_RS10190 2301492 .. 2301528 +  -7.9  -4.11692   ACCCCTTGCACACTC    CTACCGCTTCGCTCCGG TCA CCGGGTCGAAGTAGTAC    TTTTGCCCGTCGATA  74 85
LCQ52_RS10205 2307003 .. 2307045 + -15.6  -2.81225   CGCATCGAAACCACG CTGTAGGAGGGACCGGCG GCCAGCG TGACGGCCCCTCCTACAG TGCTTGGATTGTATC  86 20
LCQ52_RS10210 2307933 .. 2307965 + -13.4  -4.34402   AGCGACGCACTAAAA      GATGGGGGCGCAAC CGTGA GTCGCACCCCCATC      TTTTAGTGTCAGCCC 100 42
LCQ52_RS10240 2312812 .. 2312845 +  -3.7  -3.82031   GCGCGGTGGAGCTGG     CCCTTGGGGT-CCGTG TTC CGCAGTGCCGCGAGGG     TTTCGTGCTGATTGC  56 433
LCQ52_RS11135 2313555 .. 2313569 +  -3.5  -2.78384   ACGCAACCGTGACCG               TGCGG CCAAC CTGCA               TCTGCTGGCCGGCGA  40 305
LCQ52_RS10265 NONE
LCQ52_RS10270 2319633 .. 2319664 + -16.7  -4.68593   TTCAGACCATAGAGC      CCCCTGTGATTCG TATTGC CGAATCGCAGGGG       TTTTTCAATGCTGCG 100 43
LCQ52_RS10275 2320598 .. 2320611 +  -9.5  -3.40403   AGGAGACCACCACAC               CGGCG GAGT CGCCG                TTGTCGTCGCGCAGC  65 180
LCQ52_RS10295 2326493 .. 2326503 +  -2.4  -3.78953   GCGTCGCCATTCCAC                 CGCG GAC CGAG                 TTTGGTCATGCCGAT  52 123
LCQ52_RS10325 2333180 .. 2333191 +  -3.6  -3.61398   TCCAGCGGCGGCTGC                CCGT CGAT GCGG                 TTCTTCAGCGCGCGC  51 228
LCQ52_RS10340 2338183 .. 2338218 + -22.2  -2.52464   ATTTCTCTTAACGGA    CTTACAGCCGATTTCA CCGG TGAAATCGGCTGTAAG     TCCGTTAAGAGAAAG 100 103
LCQ52_RS10345 2340041 .. 2340076 + -14.2  -2.52464   CTTCCCTCTGACGGA    CATACAGCCGATTTCCG TAT CCGAA-TCGGCTGTATG    TCCGTTGAGAAAGCG  81 59
LCQ52_RS10375 2350628 .. 2350644 +  -4.4  -4.28361   CGCTCCCACGTGGTA             GTGGCGC CCAT GCGC-AC              TTTTCCTAGGGTTAG  66 147
LCQ52_RS10390 2355679 .. 2355730 + -19.8   -3.9941   TTGGCCGCGGCTGAA GTGCTCCTATGTTTTGCCGACTTCT CAC AGA-GTGAGCAAAACATAGGAGCAC TTTAGTTATCCACAG 100 54
LCQ52_RS10395 2357259 .. 2357272 +  -4.5  -3.68619   ACACATCGGCGGAAT               TCCGG GCTT CTGGA                TTTGCATACATTGAG  55 380
LCQ52_RS10405 NONE
LCQ52_RS10410 2361325 .. 2361343 +  -5.8  -2.70932   GCTCAACGTACTGGG             CGCGGCCG CTT CGGCCTCC             TCGTTGGACGCGCCG  46 226
LCQ52_RS10430 2365813 .. 2365853 +  -6.3  -3.31144   CGAGAATCAGAATCG GC-GCGTCCTGCACCATCGC GCGG GCGATGGT-CAGCA-GCTGC TTCTGGCCCTGGGAG  55 434
LCQ52_RS10490 NONE
LCQ52_RS10495 2390786 .. 2390844 + -27.2  -4.24342   GGCGAAGAAGTAAGG CTCCATTTGCGAATAGCTCTCACTGA TGAGCAC TCAGTGAGAGCTATTCGCAAATGGGA TTTATTCATGAAACA 100 28
LCQ52_RS10510 2393785 .. 2393817 + -12.2  -2.53876   ATACATTAAAACGCA      CAGAAAATCACACA TATAC TGTGCGATTTTCTG      TGCGTTGCAGTGAGC  71 94
LCQ52_RS10535 2401407 .. 2401419 +  -3.3  -5.00616   TGTGATTGAGCGGGT                GCGTG CCT CACAC                TTTTTTGCGGCGGAC  76 151
LCQ52_RS10550 NONE
LCQ52_RS10555 2405435 .. 2405446 +  -2.2  -2.65815   ATAGGCTCGGATGGG                CTCG TCAC TGAG                 TCGTCTCAGTCTCAG  38 57
LCQ52_RS10560 NONE
LCQ52_RS10565 2411073 .. 2411085 +  -4.1  -4.64676   TGAACCTGCGCCTTA                TCGTG ATA CATGA                TTTTATTCGACGTAG  72 337
LCQ52_RS10620 2427237 .. 2427291 + -19.5  -4.08216   CTCAGCATAACGAAA GCGCCGGTGGGTGGGTTAAGCAAC TGATGATT GTCGGTTAAC-CACCCACCGGCGC TTTTGCGCCACCTCC 100 43
LCQ52_RS10675 NONE
LCQ52_RS10680 2444165 .. 2444193 +  -7.3  -3.06183   GGCGATATGGGAAAA        GCCCCCCTCGG CGGAAAA CCGAAGGAGGC        TTGGGTGGAGCTGCA  57 40
LCQ52_RS10700 2448724 .. 2448760 + -29.7  -3.33815   GCATATTGGGTAGGC    CGTTCTTGGCTCCCCTC AGA GAGGGGAGCCAAGAACG    TTGCTTCGCCACAGT 100 28
LCQ52_RS10715 2454291 .. 2454301 +  -5.4  -3.69618   GCCAAGCGGCGGTGG                 CGAA CAG TTCG                 TATTTTGGGATTACG  58 359
         dcd 2456846 .. 2456863 + -14.1  -2.97029   TGCGACGTACCATTC             GGCCGGC GGAT GCCGGCC              ATTTGCTTAATCCCA  86 45
LCQ52_RS10735 2458754 .. 2458794 + -32.8  -2.87344   AGCCGTTTGGATATA  GCAGTGGGCCGGGCTCTG AATAC CAGAGCCCGGCCCACTGC  TATATGCCCACAATC 100 169
        rlmB 2465321 .. 2465345 + -15.8  -4.08974   GGTTGTACATACACG          GAAGCCCCTC TATTT GAGGGGCTTC          TTTGTGTGATGGGCT 100 62
LCQ52_RS10830 2489434 .. 2489444 +  -4.6  -3.95554   TGCGGCAGGATCATT                 GTCG CCA CGGC                 TGTTTTCTTCAGTCG  60 106
LCQ52_RS10840 2490719 .. 2490755 + -26.1  -3.85859   CATTCAGATACACAA    TGGACGGCCTGTTGAGT AGC ACTCAGCAGGCCGTCCA    TTCTATTTAGCTATT 100 92
LCQ52_RS10845 2493433 .. 2493445 +  -2.7  -3.37344   CACACATGGCCGTTG                TGTAT CCG ATACG                TTCGTTCCGTCACAC  47 73
LCQ52_RS10850 2494638 .. 2494650 +  -2.7  -3.60792   CGGTATACTAGTCAT                TTGTT CGC AACGA                TTTACGCGTTAAGAA  49 123
LCQ52_RS10855 2494895 .. 2494927 + -10.6  -5.70761   GCTCCGCGCCTTCAG      GGGGGCGGGA ACATCCCCTTCTC TCCCGCCCCC      TTTTTCTTTTCTTTT 100 175
LCQ52_RS10860 2496533 .. 2496545 +  -4.8  -3.23395   AGGCATGGCAACATT                CCGA ACAAG TCGG                TTGGTACTGATCGGT  49 3
        rsmA NONE
LCQ52_RS10870 NONE
LCQ52_RS10875 2499167 .. 2499195 + -14.7  -5.21709   CATCTTCGCGAAAAA        CCGTACGCTGA CACGTAT TCAGCGTACGG        TTTTTTGGTATCGGA 100 55
LCQ52_RS11145 2502064 .. 2502098 +   -20  -2.53581   CTGGCACACGCACTG     GCGGCTGGCGTCGCCG TTG TGGCGATGCTGGCCGC     TCCATTGACCGTCTA 100 73
LCQ52_RS10890 NONE
LCQ52_RS10895 NONE
LCQ52_RS10900 2508185 .. 2508223 + -19.7  -3.66844   TAACTGACCCAAGAA  GGGGCGGTACCGTTCGCA TACA TTCGA-CGGTACCGCCCC   TTCTTCGCATCTGGC 100 57
LCQ52_RS10905 NONE
LCQ52_RS10910 NONE
LCQ52_RS10915 2511194 .. 2511207 +  -5.2  -4.62069   GATCCTCGCGGCGTT               GCGC TTCAGT GCGC                TTTTTGCCATAGAAG  73 375
LCQ52_RS10940 NONE
LCQ52_RS10945 2518897 .. 2518916 +  -9.2  -3.69333   TTGCGCAAAAGCGGT            CTGGCCCG TTGC CGGGTCGG             TTTCAGTCGGTTGTC  70 238
        rpmH NONE
        rnpA 2525765 .. 2525780 -  -2.5   -3.5393   ATCACCGCCTTGAAA              GAAGC TGTCAT GCCTC               AGCCACCTTATGCGC  47 17
        yidD NONE
        yidC 2524394 .. 2524450 -   -14   -4.2074   CCCTGAACAGAGAAA GTAATGTCGGTGCGTGTTGAATGTTTC ACGT GAAACATCGAACTCGCACCGACAT-AG TCGTCACTTCTTTTT 100 29
LCQ52_RS10970 2523680 .. 2523728 - -16.8   -3.9392   TTTCACGTGAAACAA TCAACATGGAGAATGGCGCCGC TCATT ACGACGCCATTCTCCATGCGGT CACTTTAGTTTGTTC 100 94
        rsmG 2522925 .. 2522945 -  -3.3  -4.56775   ATCGTCCCGTAAAAA            TGTGGATAA CTT TTACGCACA            TATGGAAATGTGGAT  67 60
LCQ52_RS10960 NONE
LCQ52_RS10955 2520356 .. 2520366 -  -3.2  -3.77588   ACTGCACAGCAATAA                 TGCC GGC GACA                 ACACGAATGTTCTTA  54 46
LCQ52_RS10950 2518717 .. 2518747 - -18.4  -4.43477   GCCATGGAACGAAAA       GTATGGCCCGTGCT ACA AGTACGGGCCATAC       GCATATACATGATCT 100 197
LCQ52_RS10935 NONE
LCQ52_RS10930 NONE
LCQ52_RS10925 2511353 .. 2511375 -  -2.6  -4.99435   CGGAACAACGAAAAA           CCTCTCACCA GAA TCATGCGAGG           CTGCACCTTTTAAGA  74 236
LCQ52_RS10880 2499167 .. 2499195 - -14.7  -4.57073   CATCTTCGCGAAAAA        CCGTACGCTGA CACGTAT TCAGCGTACGG        TTTTTTGGTATCGGA 100 52
LCQ52_RS10835 2489297 .. 2489339 -  -6.3  -3.14564   CTATTGCGCGAGGAA GTGC-GTGAGCTGACC-GCTA CGG TAGCCGGTCTGCGCACCGAAC TTGAGCGACGTTGAT  52 84
LCQ52_RS10825 NONE
LCQ52_RS10820 2486983 .. 2487020 - -24.9  -3.35679   CGTGTGGAGCCAGAA   GGCCCGGCCGGATGTCC AAAC GAGCATCCGGCCGGGCC    TTAAAAGTAGTTGTT 100 82
LCQ52_RS10815 NONE
        nrdI 2485713 .. 2485757 -  -2.8  -3.05384   GCTCCCCTCAGTCAA CTTCGTTG-A-CAGCTCCCCTC GGA GAGGGGAGCCAATACCTCGAGG GGGTCAAGATTTACT  43 36
        nrdE NONE
        nrdF NONE
LCQ52_RS10795 2480738 .. 2480748 -  -6.8  -2.87963   CCGAGAACTACTATA                 CACG GAC CGTG                 GACCAAGGCAAGTGG  53 193
        ugpC 2479323 .. 2479352 - -17.3  -4.65895   TTTTCTAGGCAAAAA       GAAAAGCCCCGCA GCTA TGCAGGGCTTTTC        CAACGAGGTCATAAG 100 102
LCQ52_RS10785 2470918 .. 2470938 -  -8.9  -2.64107   GAAATCTTGACATCA            CGAGACCGC GTG GCGTCCTCG            TTTTCGGGATGAGCC  59 2
LCQ52_RS10780 NONE
LCQ52_RS10775 NONE
LCQ52_RS10770 NONE
LCQ52_RS10765 NONE
LCQ52_RS10760 2465324 .. 2465342 - -11.7  -3.17797   TGTACATACACGGAA             GCCCCTC TATTT GAGGGGC             TTCTTTGTGTGATGG  78 74
LCQ52_RS10750 2462903 .. 2462913 -  -6.8  -3.77832   CTCCAAACCGAATAA                 CGCT TAC AGCG                 AATCGTGAAGACTGC  65 18
LCQ52_RS10745 2461957 .. 2461967 -  -2.4  -3.34043   GCCATTATTCCATAA                 CCGC GTG GCGC                 ACTTGGCGCACAGCG  45 55
LCQ52_RS10740 2458754 .. 2458794 - -33.5  -2.87211   AGCCGTTTGGATATA  GCAGTGGGCCGGGCTCTGA ATA CCAGAGCCCGGCCCACTGC  TATATGCCCACAATC 100 58
LCQ52_RS10725 NONE
LCQ52_RS10720 2454141 .. 2454163 -  -9.9  -3.18681   CGCCAATTCCAGTAA          TGGCG-GCTG ACTA CAGCACGCCA           GAAGTAATGTCGTTG  68 13
LCQ52_RS10710 NONE
LCQ52_RS10705 2448714 .. 2448771 - -14.9  -2.90723   TGATTGTGAAGCATA TTGGGTAG-GCCGTTCTTGGCTCCCCTC AGA GAGGGGAGCCAAGAACGTTGCTTCGCCA CAGTTACTCCGCCAC  86 140
LCQ52_RS10695 NONE
LCQ52_RS10690 NONE
LCQ52_RS10685 2444165 .. 2444193 - -12.4  -4.16943   GGCGATATGGGAAAA        GCCCCCCTCGGC GGAAA ACCGAAGGAGGC        TTGGGTGGAGCTGCA  91 41
LCQ52_RS10670 NONE
LCQ52_RS10665 NONE
LCQ52_RS10660 2437841 .. 2437863 -  -4.8  -4.16016   CGATTCCCGAAGAAA           TGAGGAAGGC TTG ACGTTCCCCA           TAGGCAAGCACTTCC  62 92
LCQ52_RS10655 2436271 .. 2436298 -  -9.9  -3.18199   GAACTGGGAATCGAA        CATCGCACACA ACGTCG TGCGCGCGATG         GGAAGGAACCAGGCG  68 85
LCQ52_RS10650 NONE
LCQ52_RS10645 NONE
LCQ52_RS10640 NONE
LCQ52_RS10635 2430750 .. 2430767 -  -3.5  -3.38378   TCACAGTCTAAAAAT             TGGCGAAT TAC ATTC-CCA             TTGGAGAACTGCGTT  49 80
LCQ52_RS10630 2428748 .. 2428788 - -19.9  -4.93968   ACCGAGAAGCAAAAA  CCCCGGGTATAAGCCTTGA TTT TCAATGCTTATACCTGGGG  TTTCGACGTTACGGT 100 115
        ilvA 2427237 .. 2427291 - -21.7  -4.02108   CTCAGCATAACGAAA GCGCCGGTGGGTGGGTTAAGCAAC TGATGATT GTCGGTTAA-CCACCCACCGGCGC TTTTGCGCCACCTCC 100 99
LCQ52_RS10615 2424286 .. 2424318 - -12.8  -3.24747   CTTCCACACCAGCAA     CCCCGCCGCCATCGCA CCA TGCGAC-GCG-CGGGG     CGCACACCGTCGGAC  83 66
LCQ52_RS10610 2420835 .. 2420847 -  -9.1  -2.50016   TTGCAGGAGGAAGAT                GCGGT CCA ACCGC                CAGGGGTTGGAATGT  59 40
         rrf 2420533 .. 2420560 - -12.6  -3.59262   TCGGATATGGGGAAA        GCCCCTTGGGGC GTGT GCTCCGAGGGGC         TTCCTGTACGTGTGG  85 40
LCQ52_RS10600 2418068 .. 2418100 - -12.8  -3.24747   CTTCCACACCAGCAA     CCCCGCCGCCATCGCA CCA TGCGAC-GCG-CGGGG     CGCACACCGTCGGAC  83 66
LCQ52_RS10595 2414617 .. 2414629 -  -9.1  -2.50016   TTGCAGGAGGAAGAT                GCGGT CCA ACCGC                CAGGGGTTGGAATGT  59 40
         rrf 2414315 .. 2414342 -   -17  -3.59979   TTCGGGTATGCGAAA        GCCCCTTGGGGC GTGT GCTCCAAGGGGC         TTCCTGTACGTGTGA 100 40
LCQ52_RS10585 NONE
LCQ52_RS10580 2412613 .. 2412631 -  -4.5  -2.85351   CGTCCGCACAGCAGA             CCGGG GGGAGGAGG CCCGG             GCGTCGGGATTCCAC  45 224
LCQ52_RS10575 2411163 .. 2411173 -  -6.8  -3.45118   CGACCCCATAACCAA                 GCCA GTT TGGC                 AGATTCTAGTGGTGG  58 99
LCQ52_RS10570 2410746 .. 2410758 -  -4.1  -4.14392   CCGCAACCTTGAAAA                CACCA AGG TGATG                TAAGTGTTGGACGAA  60 144
LCQ52_RS10545 2403221 .. 2403246 - -19.7  -4.63952   ACCACAAACAATAAA         GGCCCGCCCGC AGCA GCGGGCAGGCC          AGCGCAATCGCAGCG 100 50
LCQ52_RS10540 2401463 .. 2401499 -   -13  -4.24075   ACTCAGCAATACAAA    GCGGCGCCCCCG GAGAAGGAAATGG CAGGGGCGCCGC    GGATTGTTACTTATC 100 62
LCQ52_RS10530 NONE
LCQ52_RS10525 NONE
LCQ52_RS10520 2397177 .. 2397217 -  -3.1  -2.89793   TTATGTATATAAGCA  CTTACGGGGGGCAACCG CCCAGCC CGAACACTCCCCGTATG  CCAAAAGCCCCCTTC  42 183
LCQ52_RS10515 2393781 .. 2393821 - -22.2  -4.39166   TGTTATACATTAAAA  CGCACAGAAAATCACACA TATAC TGTGCGATTTTCTGTGCG  TTGCAGTGAGCAGCT 100 47
LCQ52_RS10500 2390785 .. 2390843 - -22.3  -2.72013   AGGCGAAGAAGTAAG GCTCCATTTGCGAATAGCTCTCACTGA TGAGCAC TCAGTGAGAGCTATTCGCAAATGG-G- ATTTATTCATGAAAC 100 28
LCQ52_RS10485 NONE
LCQ52_RS10480 2383865 .. 2383891 -  -2.4  -4.57837   ATATTCCGCCAAAAA         GTTCAATTCA TCAACAC CAAATTGAAC         TTCTACCTCTATTCC  65 34
LCQ52_RS10475 2381918 .. 2381957 - -18.3  -3.09834   TATTTTAGCATCTAA  TTAGTACATTAGGACAT TGTTTT ATGTCCTAATGTACTAA   TTAGGCGGCTAATTG 100 257
LCQ52_RS10470 2380171 .. 2380184 -  -3.9  -4.18018   TCGGCGCAGCCAAAA               TGTTT ACGC AAACA                TTTTGATATGAGCGA  60 194
LCQ52_RS10465 2375438 .. 2375490 - -15.6  -3.59315   CCAATTATGCTCAAA GAGCGGAGGAACCGGCCGGCAATA GTCAA TATTGCCGGCTTGTTCCTTCCCCC ATTACTGTGCGAGGG 100 43
LCQ52_RS11140 2371264 .. 2371322 - -36.4  -2.88663   ATGTACTTGCAGACA CAATGGCCGGTCTGAGCCAGCTGCCC TCGCATG GAGCAGCTGGCTCAGACCGGCCATTA TTGTTGCTTTGTACT 100 163
LCQ52_RS10450 2370563 .. 2370607 -  -6.6  -2.74756   AAACCATTGCAATTA TTGGCTTTGACCATTTTCGTG GAGT CACGAAAATGGTCAT-GAAAA ACATAAGGACACACC  52 17
LCQ52_RS10445 NONE
LCQ52_RS10440 2367545 .. 2367555 -  -8.2  -3.01712   CTTCGCCTGGGAACA                 GCCC ACT GGGC                 TGTTCCCTTTACGGC  60 79
LCQ52_RS10435 2365174 .. 2365198 -  -7.1  -3.16553   ATAACCACGAAGACA          TCGACGCATGG CAG CAATGCCTCGA          CAACGGCAAACCGCG  53 383
LCQ52_RS10425 2362605 .. 2362615 -  -5.4  -3.26712   ACTCGCAACAATATA                 GTAC GGA GTAC                 GGTCAAACGCAATTT  52 268
LCQ52_RS10420 2362455 .. 2362486 -  -8.8  -4.76478   GAAAACAAATGAAAA      GACCCTCTGC GGTGGAATGAAT GCAGAGGGTC       TCGTGGAGCTGACGG  93 27
        rsmI 2361011 .. 2361023 -  -4.8  -3.57561   CCCGAACTGCGTAAA                TGGC TGGTT GCCA                ATCCCAAAGCCGACG  55 153
        metG 2357628 .. 2357649 - -14.4  -4.45765   CCCAAAACGAAGAAA           CCCGGCGG AGGGGG CCGCCGGG            TGAGAGAGAAGAGAG 100 303
LCQ52_RS10385 2351672 .. 2351682 -  -2.4  -2.69871   GCCGAGAGCAAATAT                 CAGC CGC GCAG                 CCAGACGGTCATTTC  38 14
LCQ52_RS10380 2350515 .. 2350532 -  -5.5  -3.61268   CAGGTAACGCTGAAA             CGCCG AAATAGGG CGGCG              ATTCCCGACTGCCGC  55 171
LCQ52_RS10370 2347267 .. 2347301 - -14.4  -4.26188   GTGAGATACGCAAAA     GTGCCGCACACTGA ATGGTGA TCAGCGTACGGCAC     TGCGCGAAACGCGTG 100 290
LCQ52_RS10365 NONE
LCQ52_RS10360 2342886 .. 2342901 -  -4.8  -3.83026   CTTCTGCACATCAAA              TATGTA ACGG TACATA               TTCTAAACTATCTGC  58 209
LCQ52_RS10355 NONE
LCQ52_RS10350 2340045 .. 2340072 -  -9.2  -2.91264   CCTCTGACGGACATA        CAGCCGATTTCCG TAT CCGAA-TCGGCTG        TATGTCCGTTGAGAA  62 114
LCQ52_RS10335 2334181 .. 2334194 -  -5.9  -3.34398   TGTTCTCGGTAAATA               GCGGC TTAC GCCAC                GTACTGCACTGCACG  56 93
LCQ52_RS10330 2333023 .. 2333041 -  -5.8  -2.56596   TCCCGTACGAACGTA             CGACGACG AGA CGACGGCG             GCAGTGCGGTGTCGT  49 73
LCQ52_RS10320 2330600 .. 2330620 -  -6.1  -3.78022   TTCACATCGATGAAA            CCGACGTTT CAC ACACGTCGA            ATGTTCTGTTATGGG  63 140
LCQ52_RS10315 2328909 .. 2328949 - -11.1  -3.75153   TGTCGGGAATGGAAA  CGTTCCCCTTCCCTTTC GGGAATT GGCTGGGAAGGGGAACG  TCGGTCAGCTGCTGT  79 78
LCQ52_RS10310 NONE
LCQ52_RS10305 2326763 .. 2326796 - -19.6  -4.46155   CACATACCCACAAAA     GGCCGCCACCGCGG GAGGAG CCACGGTGACGGCC      TGCCCCGGCGCCCTG 100 216
LCQ52_RS10300 2325927 .. 2325938 -  -7.2  -2.71483   ACATCCGTTCAATGA                CGGC AATG GCCG                 TATGAGTCGGCTACT  55 411
LCQ52_RS10290 NONE
LCQ52_RS10285 2321410 .. 2321421 -  -7.2  -2.87931   GGCATTCTTTATAGA                GCGC ATCA GCGC                 CGCTGCAAACTGGTA  56 43
LCQ52_RS10280 2320360 .. 2320371 -  -5.8  -4.38927   GGCGGAGAGAACAAA                CAGC GATG GCTG                 GATCTGGTGGCCAAG  71 139
LCQ52_RS10260 NONE
LCQ52_RS10255 NONE
LCQ52_RS10245 2312265 .. 2312279 -  -4.2  -2.83403   CTGTTGTTATCAAAG               GAACAG ATG CTGATC               AATCCGGACAAACCA  44 218
LCQ52_RS10235 2311526 .. 2311552 - -11.6  -2.76696   CCGCCTCGGAAGAAT         CGGGAACCCC GAGCTGG GAGGTTCCCG         TCTTCGTGCGATTGC  69 199
LCQ52_RS10230 2308934 .. 2308985 - -23.4  -3.09538   TATATAAATGAGACA CAAACAAGAATGGCCACCTG-CACA ATG CGCGGCAGATGGCCATTCTTGTTTG GCATTACTTCACTGT 100 29
LCQ52_RS10225 2308663 .. 2308680 -  -3.4   -3.1355   TGCATCGACAGTGAA             GCCG-TG CGGAT CATCGGC             CAGTGGCCTATTTCC  43 54
LCQ52_RS10215 2307933 .. 2307965 - -18.5  -4.28548   AGCGACGCACTAAAA      GATGGGGGCGCAACC GTG AGTCGCACCCCCATC      TTTTAGTGTCAGCCC 100 350
LCQ52_RS10200 2303854 .. 2303871 -  -4.7  -4.11484   GCGAAGCGGGCAAAA             TCGGCGG AGCT CCGCCAT              ACATTCCAGCGACGG  62 48
LCQ52_RS10195 2301166 .. 2301184 -  -4.6  -3.05498   CACGCCATATATATA             GTATATTG CGA CATTATAC             AGAATATTATCTATA  47 333
        rfbB NONE
LCQ52_RS10165 2290759 .. 2290790 - -18.9  -3.36073   GACAGTGGCGAAACA      GAAAACCGCGCAG GTCATT CTGCGCGGTTTTC       ACACTGACATCAGGC 100 85
        rfbA NONE
LCQ52_RS10155 NONE
LCQ52_RS10150 NONE
LCQ52_RS10145 NONE
LCQ52_RS10140 2284202 .. 2284243 - -12.5  -3.36952   AAAAGCACATACGAA TTGAGGCCGGCAATAGTCAC TTA GCTA-TATTGCCGACCTCAA TCGAGCTGCAGACAC  84 69
LCQ52_RS10135 2282448 .. 2282493 - -27.9  -3.25823   TTCGCGTCAGACGAA TAAGCGTTGTCCCGTCTCTTC CTCC GAAGAGGCGGGACAACGCTTA TTCCTGCGTTTATTT 100 35
LCQ52_RS10120 2280008 .. 2280020 -  -5.5  -3.05816   GGAGCCTGCACGGAA                GAGAC CAC GTCCC                CCGACTTCAACCTGC  49 278
         glf 2277604 .. 2277616 -  -4.7  -4.98672   TCCAAAAACACAAAA                GCCTG AAA CCGGC                TATTGCCTCAGCAAT  80 90
LCQ52_RS10105 NONE
LCQ52_RS10100 2275322 .. 2275334 -  -2.6  -3.36505   AGAGGGGAGCCAGAA                CGAG TCACG CCCG                AACGATTACGTTGCG  45 17
        hutH 2272536 .. 2272555 - -11.4  -2.74523   GGAGGGTGAACAGTA            GCCCCCTC TGAT GAGGGAGC             TCACATCTATTTCAG  69 32
        clpB 2269574 .. 2269597 - -16.8   -4.1899   CCATGGTAGCGAAAA          GGCTCTCCTC CTCA GAGGAGAGCC           AATATAGTGAAGCTC 100 107
LCQ52_RS10080 NONE
LCQ52_RS10075 2267120 .. 2267150 - -10.4  -2.71924   CATGGGGCGGGAAAT       CCCCCATGGGGC GGTAATT GCCCCATGAGGC       GGCAAAATCCTCATG  66 163
LCQ52_RS10060 2264051 .. 2264091 -  -8.2  -3.14564   GGACGGTTGGAGTAA CCCCGCTCCAGGCTCCCTC TGAT GAGGGAGC-TGTCACGGGC  GATGCCCATGACTGA  60 244
LCQ52_RS10040 2257871 .. 2257892 -  -5.1  -4.18488   AGTTACCTGAATAAA           CCGGGTTAC CTGA ATAAACCGG            ACAGTTGACTCCATA  65 9
        leuC 2255219 .. 2255232 -  -2.3  -2.91912   GTATTGACTCAGAGA               TCGGC GGGG GACGA                GATTGTGCCGCGGAT  40 5
        leuD 2254305 .. 2254321 - -10.1  -3.01041   AATCTCAATCAGACA              CAGAGCC AAC GGCCCTG              GGCCTGCAATTATGG  67 140
LCQ52_RS10015 2252441 .. 2252455 -  -2.8  -2.56095   CGCACACTCAACCCA               TCATCG CGC CGACAA               ACGAAATAATGGCGA  40 3
LCQ52_RS10010 2251089 .. 2251111 - -13.4  -5.05153   ACCGCAAAAAAGAAA           CCCCGGCG TGATGGG CGCCGGGG           AGAGAAAGGAGAGAA 100 180
        murA 2248098 .. 2248129 -    -8  -4.36914   GGCTGTTGTAGAAAA      TTGT-GGCTCCCCTC AGA GAGGGGAGCCGAGGA      ACGGCCGAATTAATC  81 35
        argS NONE
LCQ52_RS09970 NONE
LCQ52_RS09965 2238575 .. 2238594 - -13.6  -3.23708   GTTCCTTAAAAAGGA            GCTCCCTC ATCA GAGGGAGC             TTGGGTATTCAGCTT  87 81
LCQ52_RS09960 2237355 .. 2237397 -  -9.2  -2.60244   TGTCGAACGAAGTGA GACTGAGGGTGGTCTCTGCC GGTAT GGC-G-GACCACTCTCAGAC CGCCTGCGGCGGCCA  59 71
LCQ52_RS09955 2235508 .. 2235539 - -20.3  -2.92389   CAATCGATCGACATA      CGAACCGGGACAG ATTCGG CTGTCCCGGTTCG       GGATTTCGGCCTCTT 100 338
LCQ52_RS09945 NONE
LCQ52_RS09940 2231248 .. 2231259 -  -7.2  -3.46602   GCCGCTACAGCAGAA                GGGC GATC GCCC                 GGCCATCTTCACGGT  60 457
        dapE NONE
LCQ52_RS09925 2225768 .. 2225782 -  -2.8  -3.02144   CTACCTTGCCTAACA               CGCA CCGAGCT TGCG               GTCAGACACCGAATT  43 121
        rplU 2225418 .. 2225434 -    -3  -2.57132   GGTCCTTTCTATAAC             TCA-GGC AATC GCCGTGA              TCTTGACGATAGTCA  40 9
        rpmA 2225099 .. 2225120 - -12.9  -5.26316   TTACCTTACAAAAAA           GCCGCGTCC TTAC GGGCGCGGC            TTGAAAAAAGCTTGA 100 52
        obgE NONE
        proB 2222200 .. 2222222 -  -2.6  -4.79223   CTACAGCACGAAAAA           TCGCCAGAGC CGC ACTATGGTGA           TGGAATCTGTCGTGT  68 56
LCQ52_RS09900 2220836 .. 2220880 -  -7.8  -4.13767   TTCCCTAGGTGAAAA TCCACCTCGGCG-TGCGTTCC GTAG AGAACGCTTCGCCACGGCGAA ACCGCCAAGTCGTTA  74 102
LCQ52_RS09895 NONE
        secE 2220497 .. 2220509 -  -3.3  -3.07043   CGGATCAGCCGAACA                CCCAC AGC GTGGC                CTTGCTTAGACCGAA  43 2
        nusG 2219525 .. 2219545 - -16.9   -5.1523   CGGACAACACAAAAA            GCCCGACCA CGA TGGTCGGGC            TCTGCAAAGTTTGGG 100 43
        rplK NONE
        rplA 2218108 .. 2218132 - -15.8  -4.70659   TCGCATATGCAAAAA          GGGACTTCCC TTTAC GGGAAGTCCC          TTTCAGTAGCTATTG 100 54
LCQ52_RS09870 2215988 .. 2216020 - -12.8  -3.24747   CTTCCACACCAGCAA     CCCCGCCGCCATCGCA CCA TGCGAC-GCG-CGGGG     CGCACACCGTCGGAC  83 66
LCQ52_RS09865 2212537 .. 2212549 -  -9.1  -2.50016   TTGCAGGAGGAAGAT                GCGGT CCA ACCGC                CAGGGGTTGGAATGT  59 40
         rrf 2212073 .. 2212114 - -15.1  -4.07568   GGTTGCCGCCCAAAA CGCACTGGGCCCCGGCAGGA GTA TCCCGTCGGGGCCCAA-GAG GTTTCTGGCTCCCCT 100 188
LCQ52_RS09855 NONE
LCQ52_RS09850 2210340 .. 2210373 -  -4.5  -3.50393   GCTGACCGGACATAA     CCG-TCCAGCCCGACA GCC TAGCGGGCCGAATCAG     GCTGCCTGAATCTCG  52 22
LCQ52_RS09835 2206197 .. 2206228 -  -9.3  -3.16564   TGGCGACGCCATCAA      GGCC-GTGGTGGCC TCTCT GGCCGCCGCCGGCC      TGTCCAAGCTCGGTC  65 77
LCQ52_RS09825 NONE
LCQ52_RS09820 NONE
LCQ52_RS09815 2191820 .. 2191847 -   -15  -2.64155   GCCCCTTGAAACGCA        GAAAGCCCACTCC GAG GGAG-GGGCTTTC        GTATGTTCTGCATAT  83 178
LCQ52_RS09810 NONE
LCQ52_RS09805 2190876 .. 2190888 -  -5.5  -3.26932   ATAATCACAACCCAA                GACTC GCC GAGCC                ACCGGCGCTATTCCA  52 33
LCQ52_RS09800 NONE
LCQ52_RS09795 2189992 .. 2190004 -  -3.4  -3.18023   CCATGAGTACTAATA                CTAC TCGGG GTAG                CTCACCCTTCCGGTA  45 71
LCQ52_RS09790 2189194 .. 2189204 -  -5.4  -3.57309   GAAAATCCCCGTAAA                 GCAT ACT ATGC                 TCTGCTTTTGATGAT  55 97
LCQ52_RS09785 2187661 .. 2187708 -  -4.8  -3.53563   AGACCGCCGGGGAAA GCGT-CGGGGC-GCGGCTGGCGA TGTTC TCGCC-GCTGCCGGCCGGCACGC GCGTCAGCGTCACGC  53 423
LCQ52_RS09775 NONE
LCQ52_RS09770 NONE
LCQ52_RS09765 2184440 .. 2184484 -  -8.6   -3.8917   CCTTAACGATAACAA GTGTCAGGTATGGGTCGGAT GTTTT ACGCAATCCATACCTGACCC ATGTAAAGCAACGTT  71 40
LCQ52_RS09760 NONE
LCQ52_RS09755 2182885 .. 2182914 -  -4.9  -2.90813   TACTGTCGCAAAGCA       TCCG-GCATAGCGG TTG CCGCCATGCACCGT       TCCTCAAGGGTCGTG  46 90
LCQ52_RS09750 NONE
LCQ52_RS09745 NONE
LCQ52_RS09740 2176414 .. 2176428 -  -9.2  -3.44274   CAACGAGAACAGGAA               CGGCAG GAT CCGCCG               CTATCTGCCCAAAGG  65 300
LCQ52_RS09730 2172200 .. 2172217 -  -7.7  -3.40899   AACCTTTCATGATAA             GCACTCA ACAT CGAGTGC              GTATTCCAATAGCAT  61 206
LCQ52_RS09725 2169190 .. 2169236 - -15.3  -3.41024   GGTCTCAACATAACA GGATGGGTTGTACGAATCCACG TTGC CGAGCATTCGCACAACCCA-CC ATTGCGACACATCAC  95 88
LCQ52_RS09720 2168034 .. 2168047 -  -2.3  -2.55606   CCAGACACCACGAAT               CAGAC CAAC GTCAG                CAGGCCGCCAAACAT  38 11
        rpsO 2167610 .. 2167639 - -17.2   -4.2349   TGGCGATATGTAAAA       CGCCCGAGCACC ATCCTA GGTACTCGGGCG        GAAGTCTTCAATTAT 100 37
LCQ52_RS09710 2164452 .. 2164496 - -18.9  -3.41291   AAGAAGCCGAAAAAC CAAAAAGGCTTCTATACCG AATGAAA CGGTATAGAAGCCTTTTGG TTTGCGATCAAGCCC 100 163
LCQ52_RS09705 2162893 .. 2162918 - -16.1  -3.91144   GCCATACGGCATAAA         GGCCGGGCTCT CACA AGGGCCCGGCC          TTTGTTGTTGCCACA 100 193
LCQ52_RS09695 2160153 .. 2160172 -  -7.1   -5.4505   CCGGGCAACAAAAAA            GCCCTGC GCACAG GCAGAGC             AATATAATCTCGCGA 100 211
        rplJ 2159543 .. 2159571 -  -8.2  -2.56288   AAATTATCGAAGCGA        CTGATTCATGCC GTGAG GGCGTAAATCAG        GCAGCCTTCTCCTGC  56 22
        rplL 2159012 .. 2159039 - -13.5  -3.58343   CTCAGTATGCGGAAA        CCCCGCAGCCTG AAACA CAGG-TGCGGGG        TTCCTCGAAAAGCTG  89 65
LCQ52_RS09680 NONE
LCQ52_RS09675 NONE
LCQ52_RS09670 2153566 .. 2153603 - -13.5  -4.07568   GTCGGCTGCGGAAAA   CACAGTGTTGGGGCGCAC AGA GTGCGCCCCAACTCC-TA   CTCGCGCTCGTTAAA 100 23
LCQ52_RS09650 2150815 .. 2150825 -  -2.4   -2.7044   GAGTCAAGGATAGGA                 GACG TGC CGAC                 GAACTGGGGCTTTCC  39 79
LCQ52_RS09645 2149221 .. 2149232 -  -5.8  -2.57211   ATGCCGCGCCAGAAC                GCCT CAAG AGGC                 TGACGATCACTTGCG  49 137
       groES 2148825 .. 2148852 - -17.8  -4.66537   CCTGGCAAGAGAAAA        CCCCGACTGTCC GTGG GAACAGTCGGGG         TTGTTGAAGTTCGCT 100 51
LCQ52_RS09625 NONE
LCQ52_RS09620 NONE
LCQ52_RS09615 NONE
        rpmG 2146840 .. 2146858 - -13.1  -4.74706   GTCAATACGCAAAAA             CCCGGCC GAATG GGCCGGG             TTTTGTAAAGCTGTG 100 51
LCQ52_RS09605 2145330 .. 2145340 -  -5.4  -3.71848   CTTGTCTATTAATAA                 GACT CAG AGTC                 CGCAATATATGGGAT  58 72
LCQ52_RS09600 2143679 .. 2143702 -  -2.2  -2.73028   AAATACTGATACAAG          GGTACGCGCC TGTT GGGACGCTCC           TCGCTCTCAGCCGTT  39 32
LCQ52_RS09595 2143253 .. 2143284 - -14.5   -2.7535   GTTCCTAAGATACGA      CGAACCCTCGGCC GTGATA GACCGAGGGTTCA       ATCCGAACTATGCGC  83 69
        dapC 2141548 .. 2141574 -  -8.6  -3.39895   CCTGCGACGAAGTAA         CCAGCACGCTGC GGC GCAAGGGGCTGG         TGGCGCGCACGCTGA  63 429
LCQ52_RS09580 2139509 .. 2139525 -  -5.8  -3.12606   CGACACATTATTGAA             CGTCCGC GGGT GCGG-CG              TCGCCGGAGAACGTA  52 1
LCQ52_RS09575 2139312 .. 2139333 -  -8.7  -5.79595   CCGGAAAACAAAAAA           GTTCCGAGC TTTC ACCCGGAAC            CTTAATCGGCGGAGT 100 35
LCQ52_RS09570 2137616 .. 2137636 -  -3.9  -3.25823   CCTCCTTGAGACCAA            GCCGAGCAA CTA TTGCTTTGC            CGCCTGCTCCTGCGT  47 14
LCQ52_RS09565 NONE
LCQ52_RS09560 2135828 .. 2135838 -  -2.4  -2.91582   CAGCTTAGTCATACA                 GGCG TCA CGCG                 AGCGGAACCGGAATG  40 19
LCQ52_RS09555 2135051 .. 2135063 -  -6.3  -3.53444   TGATTGCCGGCCAAA                TTTGC GCG GCAAA                ACACAGCAATAGTGT  57 43
        malQ 2132625 .. 2132639 -   -10  -2.52543   ACTTCGGCTAACCGA               CTCACC TAC GGTGAG               GCAATTCCCTGCCTT  63 134
        rplM NONE
        rpsI 2131324 .. 2131363 - -27.4  -4.04474   ACAGCGCGACACAAA  CACAAAGGCTCTCCGCGG AATT CCGCGGAGAGCCTTTGTA   TGCTCGGTACAGGAC 100 49
LCQ52_RS09530 2127269 .. 2127281 -  -3.3  -4.65895   TGGTGCAGGGAAAAA                TGCGG CCG CCGGA                AGAAAAAGGGAAAGC  67 212
LCQ52_RS09525 2125755 .. 2125787 -  -9.7  -3.32521   AGGATAGTCGGACAA      GGTATGCGGCGCGGC AGA ACCATGCCGCACTCC      TAGTCAATTCTCGAT  70 120
LCQ52_RS09520 2125172 .. 2125195 -   -16  -5.53991   CAGGCACTAAAAAAA          CGACCGGCGC ATGT GCACCGGTCG           TTGAATGTTAGTTAT 100 127
LCQ52_RS09515 2123710 .. 2123726 -  -2.9  -2.56271   TTTTGACGAGAACAG              TCAGCGA GCA CCGCTCA              GTTCGCCGCCACTTT  40 23
LCQ52_RS09510 2122473 .. 2122493 -  -7.5  -2.94872   CCGATGGAACAACTA            CGGCGAG ATGATTG CCCGCCG            GAATCCTACGGATAT  56 130
LCQ52_RS09505 2121257 .. 2121271 -  -2.1  -3.44443   GTCATAGAACACCAA              TCACGG CAAA CCG-GA               TGTCACCAGCCATGG  45 267
        adhE 2116700 .. 2116731 - -15.1  -3.74792   CACCACATATGCAAA      GGAGCCCGGCCCC TGTAAT GGGATCGGGCTCC       TTGTGTCGCGCTATG  95 109
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 2110138 .. 2110150 -  -3.3  -2.72043   AATGCCCCGGTAAAT                GGCGA GCC TTGCC                GAACTTTACTTACTT  41 35
        rplN 2109705 .. 2109718 -  -3.8  -2.63596   TGCCATGTCAGATCA               CCTC CGGGGC GAGG                GACACGATCTTCATG  42 4
        rplX NONE
        rplE NONE
LCQ52_RS09415 NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO 2105746 .. 2105783 -  -3.1    -4.386   CAATTTTTTAGAAAA   GGGTACCCCCGTCCACC TATT GGCGGGCGGGGGTTGTA    CAGCCTATTGCGCTC  64 54
        secY 2104113 .. 2104135 -  -4.1  -4.17556   TATATGCGGAAGAAA           GATTGCTCC GTCGT GGAACAGTC           CACTGGACTGTTCCA  60 91
LCQ52_RS09375 2103374 .. 2103407 - -14.7  -2.94354   CTATATACGCACATA     CCCCTGTACGA-ACAC TCG GCGTGTCGCACAGGGG     TATGGAAACGTTGAT  86 89
        infA NONE
        rpmJ NONE
        rpsM 2102404 .. 2102425 -  -4.3  -2.70932   CCGTGGCCCGAATCA           TGCCACCGA CTAC TTGGTGGCC            TTCTTCTTTCCGGCG  45 13
        rpsK NONE
LCQ52_RS09350 2100854 .. 2100869 -  -4.6  -2.67501   CAAAGAGGCAGATCA              CTCGTC TTCC GGCGAG               AAGAACGTGCCACCT  44 7
        rplQ 2100144 .. 2100184 - -17.8  -3.14672   TTCTATGAAAACAAC GC-AAAAGGGCTGGAACCC AAAC GGATTCCAGCCCTTTCAGC  TAGCTTAGCGAAACG 100 50
LCQ52_RS09335 2096578 .. 2096590 - -10.5  -2.62983   TGCACTTGCACACGA                GCCGG CAA CCGGC                ATATTCTCGGGATAA  66 195
LCQ52_RS09330 2095698 .. 2095708 -  -8.2  -4.56597   GCCTTCGCCTAAAAA                 CGCC TCC GGCG                 TTTTCTTCACGGCTC  87 70
LCQ52_RS09325 2095240 .. 2095264 - -17.2  -5.65496   TATCAAAAACAAAAA          GGGTTCCGGG ACAAA CCCGGAACCC          TAAAGGCGGATAAGG 100 32
LCQ52_RS09320 2092982 .. 2092994 -  -4.8  -3.10905   TCAGAATTCAGCCAA                GGAG CTTTC CTCC                GTTGGACCCCATGCA  47 406
LCQ52_RS09315 2091512 .. 2091528 -  -5.1  -4.08216   CGACCCCCGCCAAAA              GGTCTAT GCC ATCGACC              AACTACTGGCCAACC  63 296
        nusA NONE
        infB 2086483 .. 2086499 -  -2.2  -4.54047   CCAGGGGAGAGAAAA              TCATGG AACTA CCATGT              CTCTCCCCCAGTCAG  65 84
        rbfA NONE
LCQ52_RS09290 NONE
LCQ52_RS09285 2083314 .. 2083342 -  -2.9  -4.13767   GCCGCCACGTCAAAA        CCCATTGCGCGAG CCA CGTGCGCCATTGG        TGAGATTTCCCTGAC  61 230
LCQ52_RS09275 2081156 .. 2081192 - -24.7  -2.52676   TATGCCCTGAACGCA    GTTGGGGCATCCACATC AGC AATGTGGATGCCCCAAC    GTTCATAAGTTTGTG 100 67
LCQ52_RS09270 2080895 .. 2080931 - -14.5  -4.45151   AAGAGCCAAGCAAAA    GAGAAACCCCGCGACCA TAA CGATCACGGGGTTTCTA    ATGCCTTGATTGCAG 100 47
LCQ52_RS09260 2078605 .. 2078615 -  -8.2  -3.53811   CGTACCCCCCGCAAA                 GCCC AGT GGGC                 TGACGGTATCCGGTA  65 229
LCQ52_RS09250 2077147 .. 2077161 -  -4.2   -3.1478   ACGAGGTGATCAATA               TCGTCA AGT TGGCGA               TGGATCTTGACGCGC  47 273
LCQ52_RS09235 2073324 .. 2073345 -  -8.7  -3.04144   GGTCGAGTTTTAACA           TCGTTGTGG GACG CCACGACGA            ATTTGCCCATTCCAG  63 430
LCQ52_RS09215 2065791 .. 2065815 -  -4.2  -4.18058   AATCACATTGGAAAA          GCCGGCCA AAGCGCAGG TGGACGGC          GACATGCTACCGGAG  63 195
        serS NONE
LCQ52_RS09200 2062983 .. 2063007 - -15.7  -5.98675   CAGAAAAAGAAAAAA          GGGCCTGGGCA TGT TGCCCAGGCCT          CGGTTCGCGGACAGG 100 33
LCQ52_RS09195 2062299 .. 2062322 -  -3.2  -3.64703   TCCTTCGTAGTGAAA          TCA-TCATCTC AGT GTGATGACTGA          TTACTAATGTATGCC  51 333
LCQ52_RS09190 2060854 .. 2060885 - -13.7  -3.55202   TACCCCCAAACAATA      CGGAAGGCCGGAG TATGTG CCCCGGCCTTTCG       CTATGGTGATGCGAG  89 102
LCQ52_RS09185 NONE
LCQ52_RS09180 2058675 .. 2058690 - -10.4  -4.35405   CAAAAAAACTACAAA              GCGACG AATT CGTCGC               ATACAAAATGACCGG  90 185
        gnpA 2056381 .. 2056401 -  -4.6  -2.73123   AAAACGCGGGAATCA            GGCTTCAC GCCAT GCGATGCC            GCTGTCGGGCAGGTC  45 2
        nahK NONE
LCQ52_RS09165 2053602 .. 2053631 -  -2.1   -2.8333   GTAACCAGAACAGTA       GTCATATTCCCTCC TTT GGAAGGACT-TGCC       TTCGGTTTTTCCTTC  39 70
        galE 2052541 .. 2052581 -   -20  -3.14564   GCATCGTGTGATGAA CGA-CAGATGAGCTCCCTC ATCA GAGGGAGCTCATCTGCTCA  TATCACTCCGCGTCG 100 28
LCQ52_RS09145 NONE
LCQ52_RS09140 NONE
LCQ52_RS09135 2046242 .. 2046256 -  -7.1  -2.58272   CAGACCACCAACGCA               GCCTG CCCGC CAGGC               CCCATTTACCAGCGC  51 53
        lysS 2039696 .. 2039725 - -18.7  -3.58726   CCCTTTCATATATAA       CTC-GGCTCCCCTC AGG GAGGGGAGCCAGAG       TATGCCTAATCAGCC 100 35
        menA NONE
LCQ52_RS09100 2037848 .. 2037876 - -18.2  -3.84825   GGCAGGCATAGCAAA        GGGGAGCCGCAC GTTAT GTGCGACTCCCC        TTACAGCTTGTACCG 100 57
LCQ52_RS09090 2035451 .. 2035483 - -19.3  -3.44848   GTCGCTCATCAAACA      GCATTGGTGGCATGC AAG GCATGCCACCAATTC      CTTACCTCACTGCGC 100 32
LCQ52_RS09075 2032386 .. 2032397 -  -2.2  -3.14931   GTCAGTTCGGACTAA                TACG CGGC CGCA                 ACACTTGAAATGTCA  42 116
LCQ52_RS09070 2031470 .. 2031503 - -23.3  -3.25072   GGCAGGAGAACGCAA     CAGGCCTCGGATACC GATC GGCATCCGAGGCCTG      CAATAAATCAATCAA 100 51
LCQ52_RS09065 2030577 .. 2030598 - -10.1   -4.8048   CGCGTATACGAAAAA           GGCACACCC CAAA GGACGTGCC            TTAATACGAATTCGC  95 58
LCQ52_RS09060 2029386 .. 2029407 - -15.9  -3.35695   GGGATATAAATTGAA           GAGGCTCCC TGGC GGGAGCCTC            TTTCCGTATATTCGG 100 44
LCQ52_RS09050 2027926 .. 2027940 -  -2.1  -2.62983   GTCACCTTCACAGTA               TTCGC TGTCC ACGAA               ACGGTAATCAGCATC  38 39
LCQ52_RS09045 2027132 .. 2027178 - -16.1  -3.33696   TTGGGGTCGAATGAA TATGAATCCGGCTCATGCCGCT ATAA AG-GGCATAAGCCGGATTCGCA TGCTTACTTGGTTTT 100 29
LCQ52_RS09040 2026519 .. 2026539 - -11.1  -3.18839   ACTGCGAAACACACA            GCATCGGCC ACA GGCCGATTC            CTACAGCTGCTTCGC  74 26
        galE 2022507 .. 2022547 - -12.6  -4.48877   CAAACATCCACAAAA CGACGAAGGGCGCGACCGG AACC CCGGCCACGCCCTT-ATGG  ACGGAAACGCTTCGC 100 69
LCQ52_RS09010 2022261 .. 2022275 - -11.4  -4.75308   ATGAACAGTCAAAAA               CCCGGA TAA TCCGGG               CTTCATAACCATTCC 100 42
LCQ52_RS09005 2022144 .. 2022162 - -13.1  -4.24204   GACGGATATGCAAAA             GCCCCGC ACAAG GCGGGGC             TTCATTGTGGTGGCT 100 33
        fucO 2018711 .. 2018730 - -13.6  -3.05384   TCTCTGCTTATGCAA            GCTCCCTC TGAT GAGGGAGC             TAATGCTTACTGTCA  84 49
LCQ52_RS08985 2016154 .. 2016177 -  -3.1  -3.68827   TATCGAGTACGGAAA          GCAGGGT CATCAGCGCC ACCCCGC           CCTAGGATTGCTGGA  51 11
LCQ52_RS08980 2014870 .. 2014918 -  -6.6  -3.09834   TACCCCACCAGTCAA CCCTCAGCGAAGCAAACC-CCGG GTTG CTGTTGGATTGCCCCGCTGAGCG GCTCCGGACTAGCGG  54 47
LCQ52_RS08975 NONE
LCQ52_RS08970 NONE
        dacB NONE
        tilS NONE
         hpt NONE
        ftsH 2006742 .. 2006798 -   -13  -3.30124   TGTCATTGTCCACAA CGACGTCGGCCCGGCCTGCGTACGTGA GAAA CCACATGAACAGGTCGGGCCGA-ATCG TCATCGTGTCTACTC  83 35
        folE 2006084 .. 2006103 -  -9.3  -2.52896   GTAGGTCCCAAGTGA            GCTCCCT ATGATG AGGGAGC             TTAGTAGACACTATT  59 36
        folP 2005160 .. 2005170 -  -2.4   -4.9445   AGAAGCAACCAAAAA                 CAGG GAG CCAG                 GGGAATCATGCGTAT  72 31
        folK NONE
LCQ52_RS08930 2002539 .. 2002549 -  -8.2  -3.14344   GATGGTGTGGATGAA                 GGCC GAT GGCC                 ACGTCGATGTGCCGC  58 426
LCQ52_RS08915 1999519 .. 1999540 - -14.5  -5.77677   CAAAAGAACAAAAAA           GCTCCTGAC ATTT GTCAGGAGC            TTGGTGGCGACCCCG 100 30
LCQ52_RS08905 1996755 .. 1996772 - -10.5  -3.30443   TCACCATTAGACTAA             CGCCCCG TTGC CGGAGCG              GCATCGTCAGCGCAG  71 32
        chvE 1993152 .. 1993177 -  -4.7  -3.04144   TTTCCATCGTCAAGA         TGGTGTCATTT GATG ACATGTCACCA          CTCCTCGTCACAGTT  47 119
        gguA NONE
        gguB 1990336 .. 1990380 - -14.3  -3.51137   AATGACGGCAGATAA CAGTGTGGGATCCGCACCAGC GGC ACCGGCACGAATCCCACATCG AGGAGGAGAAAGGGG  95 45
LCQ52_RS08875 1989953 .. 1989970 - -12.7  -5.60993   TTCGGCATAAAAAAA             GCCAGGG GGAT CCCTGGC              TTGCAATGCACATAT 100 95
LCQ52_RS08870 NONE
LCQ52_RS08865 NONE
LCQ52_RS08860 NONE
LCQ52_RS08855 1987649 .. 1987700 - -20.3  -4.86001   ACCAGTGCACAAAAA GGCTGGTCATAGCGGTTGCGATG TAATCG CATCGTAATCGCGATGACCAGCC TCGGGAGTTGGGCTG 100 60
LCQ52_RS08850 1985842 .. 1985873 -  -7.1  -2.50492   CACCATCATGAACAC      GCACACCGCGGCG GCCATG CGCACCGGAGTGC       CGGAAGCGGCGGCAT  48 163
        xylA 1983581 .. 1983624 - -11.7  -3.29144   CCAGCCCCGCCACAA CCAGAAAACCGCCCTTGGC GACGTT GCCTCAGGCGGTTTTCCAG CGGAAGGAGAGAAAG  78 186
LCQ52_RS08830 1982097 .. 1982114 -  -4.7  -3.08992   AGCCATTGCAAGACA             TGGCCGC CACT GCAGCCC              GCATGGTCATCGATA  47 141
LCQ52_RS08820 1979464 .. 1979502 -  -6.5  -2.69906   CTAAGAAAACAAATT   GGGCCGCGGTTGTTGCT GTGCA AGCATTCGCCGCAGCCC   GGGAATTACGGTCGG  51 52
LCQ52_RS08815 NONE
LCQ52_RS08810 1977451 .. 1977470 -  -4.2  -3.35522   GAATCGGCCCAAAGA            GCCATGTA CCTT TCCACGGC             ACGGTTATGGTTGCT  51 45
LCQ52_RS08805 1975711 .. 1975750 - -16.6  -3.03124   CCCCAGTGCCGAATA  GTCAGGCGACTTTCCCTGA TTA TCAGG-AAAGCCGCCTGGC  GTCATCATATTTCCA 100 30
LCQ52_RS08800 1973867 .. 1973877 -    -4  -3.84246   TGTTTAACGATTAAA                 CAAT ATG ATTG                 TACAATATTGTAGAG  56 54
LCQ52_RS08795 1973201 .. 1973217 -  -8.7  -2.88849   GCCAGAGCAGCAAAC              CTACCGA CCC TCGGCAG              CGGCCCGCTCTTCAG  62 9
LCQ52_RS08790 1971070 .. 1971104 -   -20  -4.37198   AATGCAAATCGAAAA     GGGGCCGGCCTGCCAA ATA CTGGCAGCCCAGCCCC     ACTCAGTGCCACACA 100 80
LCQ52_RS08785 1970733 .. 1970751 - -13.1  -5.45802   CGGTCAAAAGAAAAA             GCCCGGC GAGCG GCCGGGC             TTAAAAGGAGAAGAG 100 60
LCQ52_RS08765 1966576 .. 1966611 -  -6.6  -2.74322   GCCAACTTGCCAAAG    TGTAGCACGAGCCCGC TAAT GCCGGCACGCGCGCCA     TGCACCCATACCATG  52 73
LCQ52_RS08760 1966433 .. 1966453 -  -3.2  -3.05963   ATCTGGACGTGAAGA           CGCGCTGCG CCGC CGCAG-GAG            ACGACGCAAAAGAGT  43 39
        rpmE 1966056 .. 1966108 -  -7.9  -5.57729   AAAGAATACAAAAAA CGCCAGTCC--T-CGATCGGGTATGC CGGA GCATGCCAAATCGAATCGGACTGGCG TGAAGTATGCTACTT 100 35
        prfA 1964816 .. 1964864 - -10.1  -2.63596   GTTGATCGGACATTA GGCTCCCCTCAGTCAGCTTCGCT GAC AGCTCCCCTCACAGAGGGGAGCC ATCCGGCAAAGTCAT  63 37
        prmC 1963683 .. 1963699 -  -6.5  -3.34344   TCATCTGTCAACCAA              CGCGC GGGATGT GCGCG              TGAGACGTTCCACTC  58 231
LCQ52_RS08740 1962350 .. 1962395 - -14.1  -4.08767   CCGAGCCCGTGAAAA CACGAAAGGGAGAG-GACCGGC AAA ACCGGTCGCTCTCCTGTTCATG CGGAAGTCACGCTAG 100 75
LCQ52_RS08735 NONE
LCQ52_RS08730 NONE
LCQ52_RS08725 NONE
LCQ52_RS08720 1958501 .. 1958528 -   -12  -2.59475   CAGTGATATATGAAT        GCTCCCGCTGGCG AGC CGTCAGC-GGAGC        TGACTGAGGGTGGTT  72 120
LCQ52_RS08710 NONE
LCQ52_RS08705 1955672 .. 1955683 -  -5.8  -2.94416   GACCTTCACGACACA                CGCT TGTG AGCG                 CTCACTTATCCGCTG  51 27
        guaB 1953999 .. 1954034 -   -17  -2.91383   ATCTCGAGCCACATA    CGCGAAAAGGGCCTGC ATAA GCAGACCCTTTTCACA     AGGAATCAACCCCTA  93 70
         orn 1953218 .. 1953256 - -11.6  -3.25823   TTTGGCGCATATCAA   CCTCTCTAGACTCCCCTC AGG GAGGGGAGCCAAGTACGG   CGGACTACTTATTGA  74 30
LCQ52_RS08690 1951664 .. 1951685 - -17.3  -3.46534   TAACTGTACGAAACA           GGGCGAGCC AAAT GGCTCGCCC            CTAGCAGTTGCCTGC 100 134
LCQ52_RS08685 NONE
        cas1 NONE
        cas2 1946914 .. 1946930 -  -2.2  -5.03314   CCTACGTTCAAAAAA              GCGTGA GAAAG TCAGGC              GTTTCTTCCTCAATC  74 1
LCQ52_RS08670 1944837 .. 1944849 -  -4.1  -2.55565   ATAGTTTAAAGATAT                TCAGT TGA ACCGA                CAAGCCTGCATATGT  42 80
LCQ52_RS08665 1942943 .. 1942972 -   -18  -3.84825   GTTATCCACAGCAAA       GCGCCATTCTGC GACTGG GCAGAATGGCGC        TTGATGCGATTAACG 100 62
LCQ52_RS08660 1941928 .. 1941977 - -17.5  -3.05463   ATCCCCGTTATGTAA GAGAAAACCGCTGTGTTTGCCT CGATTAC AGGCGAACACAGCGGTTTT-TC ATGATGTATGGTTGG 100 44
LCQ52_RS08650 1938509 .. 1938539 - -11.9   -4.8543   CAAGGCCGAGAAAAA      GCGCCCG-GCAGCAC ATA GC-CTGCACGGGCGC      TTTGGATTGATTGTC 100 68
         map 1937462 .. 1937502 - -12.1  -3.88498   GGTCGATACACGAAA GCCGAAGTGCGCTCATGCT ATCAA AGCA-AA-CGCACTTCGGC TTGTTACGTCTCGAA  86 133
LCQ52_RS08640 1935995 .. 1936031 - -22.5  -2.98823   TGCGCTGTACATATA    GAAAGCGCCTCACTGGA ATC TCCAGCGAAGCGCTTTC    TCAAACCAACAATCA 100 38
LCQ52_RS08625 NONE
LCQ52_RS08620 1927742 .. 1927767 -  -5.3  -3.43965   AAAGCCAACGCACAA         GCGGC-TGCCGA ATC CCGACTCGCCGC         ACAGGCCCTACGCAA  53 290
LCQ52_RS08605 1925374 .. 1925407 -  -3.8  -3.19026   GATGGCAAGATCGAA     TGCGAGGCGATGCCG CACGC CGACACCATC-CGCA     TCATGGAGCTGATGG  47 118
LCQ52_RS08595 1922963 .. 1922987 -  -2.7  -3.62597   GTGATGGCCGAACAA          CGGGCCGACCA TCG CAATCAGCCAG          CCGTGCGCCACCATG  51 135
LCQ52_RS08590 1921962 .. 1921974 -  -4.7   -2.7242   AGGACTAGAAACCGA                GGCGG GTG CGGCC                GAATTGGTCGAGCCA  45 2
LCQ52_RS08580 NONE
LCQ52_RS08575 NONE
LCQ52_RS08570 1919497 .. 1919538 - -20.3  -2.63479   AATACCCCTATACCA CTGCGGCGTTCCCGTACAT GACT ATGTACGAGAACGCCGCCA  ACCCTGCTTGCAGAG 100 57
        mscL 1918802 .. 1918860 - -11.1  -3.80877   GGATGCTACAAAACA CGCCGCGAAACAATGGATTGTCCAGACC AAAT GGCCCCGGCAATCCGTTATTTCG-GGCA AACCAGGTAAATCTG  82 62
LCQ52_RS08560 1916781 .. 1916812 -   -13  -2.80344   TTTGGACTGAATAAG      CTGAGGCCGGGTGCA AGT CGCACCCGGCCTT-G      TTGTTTCGCGGGCTA  76 124
LCQ52_RS08540 1913959 .. 1913981 -  -4.9  -2.57132   CCCCTTTCCTATAAG          GCGAACACTC TCCT GAGT-TCCGC           ATTTTGGCCGCACTC  44 280
        nrdD 1911419 .. 1911448 - -13.5  -3.45737   CAACGATCACTAGAA       CCCGCCGTCCGTC ATCA GACGGACTGAGGG        TGGTCAACACCATAA  88 106
LCQ52_RS08530 1909995 .. 1910026 -  -4.2  -2.78679   CCTCCTTACGGAAAG      CATTAGCCCCCCCC CGCT GGCGGGAGCTGTCG       GCGGATTCTAGTGGT  45 101
        nrdG 1909071 .. 1909084 -  -3.8  -3.22298   TTCAGGCATCATGAA               CCGT TTCGGG ACGG                CTGGCAGATACCCTG  47 187
LCQ52_RS08520 1903762 .. 1903799 - -25.7  -3.86981   CACCAGAACGAATAA   GGCGGGTGTCCCGTTCC ATAC GGAATGGGACACCCGCC    TTGTCGTAGGCCGCA 100 106
LCQ52_RS08505 1896148 .. 1896179 -   -18  -3.40403   CGGCCGGTACGACAA      GGGCCAGAACGCCC GCCA GGACGCTCCGGCCC       GAATCACGGCCGGCA 100 51
LCQ52_RS08500 NONE
LCQ52_RS08495 1893225 .. 1893257 - -20.6  -3.05997   TCCGCACAAACGACA      CCGCCCGCTCCAGC ATACG ACCGGAGCGGGCGG      AAACATATGAGGCCC 100 99
LCQ52_RS08490 1891771 .. 1891787 -  -2.1  -3.53444   TGACCCTTCCGTAAA              TCGCGCG TCT CGCACAT              CACCTCCGCCACCGC  47 183
LCQ52_RS08475 NONE
LCQ52_RS08470 NONE
LCQ52_RS08465 1885721 .. 1885773 - -13.6  -4.67943   TCTCAACATAGAAAA CCGCACCTCAACCACCGGATGAGAA TTGC TTCA-ACCCGATAATCGAGGTGCGG TTTTTGCAGGCGTAC 100 44
LCQ52_RS08460 1884587 .. 1884604 -  -6.9  -4.03611   AAAATACTGAAACAA             TCAGCCG GCGA CGGCTGC              GGAGGGGCCCTGCTT  68 8
LCQ52_RS08455 NONE
LCQ52_RS08450 1881920 .. 1881969 -  -8.6  -3.00298   TTTCTGAATGATAGA TGCTGCTGGTGCGGCAGTCTGTT TGATC AACATGCT-CCGCACCAGCAGGC GCAATCAGACATTGC  59 30
LCQ52_RS08445 1880843 .. 1880864 -  -3.7  -3.21276   TCCGCGCCGAGAACA           TTCGACACT GCAT AGCGTCTAA            ATGGACGTGTTAGGT  47 82
LCQ52_RS08440 1880468 .. 1880485 -  -5.6  -2.54702   ACATAGTGTAACTCA             CGTCAT GCGGGT ATGACG              CCATATGGTTGCAGC  46 94
LCQ52_RS08435 1879324 .. 1879365 - -29.1  -3.03159   GGAACTGTTCTAACA GCGATAAAGAAGCTCCCTC TGAC GAGGGAGCTTCTTTATCGC  ACAGAGGGAGCTTCT 100 41
        ileS 1873523 .. 1873576 - -29.3  -4.78764   TAAACGCACGAAAAA TGCGGGCATCCGATATGCAGTG-TTC ATT GAATCACTGTATATCGGATGCCCGCA ATTGTTTCAGACCAA 100 68
LCQ52_RS08415 1872740 .. 1872751 -  -2.2  -4.33248   GAATTGGAGAACAAA                GACG TTGA CATC                 GTGATGAGAGCCCTA  62 48
LCQ52_RS08400 NONE
LCQ52_RS08395 NONE
LCQ52_RS08390 NONE
LCQ52_RS08385 NONE
LCQ52_RS08380 1861618 .. 1861651 - -25.5  -3.66018   CGACTAGTCCAAGAA     GGGGTGTTTCCGCTG ATGC CAGCGGAAACACCCC      TTCTTGTATATGAGT 100 41
        ilvD 1857699 .. 1857731 - -23.6    -3.889   CGGAAGCACAGTAAA      GGCCCGGCATCTTC ATAAA GAAGATGCCGGGCC      TTTCAGCTATGCAAT 100 47
LCQ52_RS08340 NONE
         arc NONE
         dop NONE
LCQ52_RS08325 1847777 .. 1847833 -  -2.8  -3.53012   TCTTGGGCTGTCAAA CTCCCCTCAGTCAGCCTTCGGCCGACGG CTC CCCTCACCCGAGGGGAG-CCG-GAGGAG TCAAAAAATTATCGC  49 34
LCQ52_RS08320 NONE
        pafA 1846016 .. 1846040 - -17.2  -3.98214   ATTACTGACGACAAA          GACCCCGACC GAGAT GGTCGGGGTC          TTTTTGTTGTGGTGC 100 73
LCQ52_RS08295 1840405 .. 1840429 - -11.3  -3.14522   GGAATGCAGATCGAA          CGCAGCGCGGG AAA CTCGCGCCGCA          GCACAAGAACTACAT  67 256
LCQ52_RS08240 1830747 .. 1830763 -  -4.3  -3.98083   TAGGGAACGTAGAAA              GAACCGC ATC GCGCTCC              CCCTACCTCGCGACT  60 177
LCQ52_RS08235 1830390 .. 1830415 - -13.3  -4.72272   TTTGGGCATGAAAAA         GCCCCAACCGT CGAA ACGGTCAGGGC          CTTCAATGCACATCC 100 56
        groL 1828529 .. 1828548 - -13.6   -5.5208   CCAGAATACAAAAAA            GGGACTCC CGAA GGAGTCCC             CTTTCAGCTCAATCA 100 60
LCQ52_RS08220 NONE
LCQ52_RS08215 NONE
LCQ52_RS08210 1824531 .. 1824552 -  -5.2  -3.46068   TCCTCAATGGAAATA           GTAAACCG AAGGTA CAGTTTAC            CTCACAGGGCTTGAC  53 42
LCQ52_RS08205 NONE
LCQ52_RS08200 1822455 .. 1822473 -  -3.7  -3.65046   TTCGCACTGGAAGAA             GCACGAC TGCAC GACGCGC             CGCTGCATGTGATGT  53 466
LCQ52_RS08190 1818918 .. 1818937 - -13.6  -2.92495   CCGACACAAACAGTA            GCTCCCCT TGAC AGGGGAGC             TGTCGCCAGAGGCAA  81 166
LCQ52_RS08180 1815905 .. 1815919 -  -6.4  -2.57132   CGTTCGGCGTAGAAG               TGGACA GGT TGCCCA               GTGGTGCTGACGCAT  49 40
LCQ52_RS08175 1814329 .. 1814360 -   -13   -3.1372   GATGGTCGATGAATA      CGC-CCGGCTCCCTC GGG GAAGGAGCCGGAGCT      GAGGAGATCAGATGT  81 33
LCQ52_RS08170 1813453 .. 1813482 - -13.7  -3.59979   TCTTGGGATGGGAAA       GGCCTGACCCC-AT ACT ATCAGGGTCAGGCC       TTTGCAACCCGAGTC  89 67
LCQ52_RS08165 1811396 .. 1811445 - -26.7  -3.14931   GGGAGCTGGCAGCAA GGCTGACTGAGGGGAGTTTACGGT TAT ACCGCAAGCTCCCCTCAGTC-GCC TACGGCGACAGCTCC 100 139
        hisS 1808391 .. 1808405 -  -3.5  -3.01712   TTTTTCGCGCGAATA               CGTCA GATTT CGACG               GTTTGCTGGGCAACC  45 13
        aspS 1806398 .. 1806434 - -26.9  -4.59773   CCCCACCCGCAAAAA    GCAAATGGCCCTTGGAA TTA TTCCAAGGGCCATTTGC    GGCTACTAGCACCGG 100 149
LCQ52_RS08140 NONE
LCQ52_RS08135 NONE
LCQ52_RS08130 NONE
LCQ52_RS08125 1800952 .. 1800999 - -13.8  -4.87626   TCGCAATAGCAAAAA CGGAGGATAGGTGCCGGAACAT CTTCAT ATGTTCC-A-ACCTATCCTCCG TGAAGGCTACGTAGC 100 103
LCQ52_RS08120 NONE
LCQ52_RS08115 NONE
LCQ52_RS08110 NONE
LCQ52_RS08105 1798556 .. 1798566 -  -3.2  -2.57423   AGACCCAGCAACGTA                 GCGA CAT TCAC                 ATTCCACTTGTTACT  40 36
LCQ52_RS08100 1797399 .. 1797422 -  -3.7  -3.02144   GGAGCCGTGCGAAGA          GCCGTGCCA TGCGCT TGGCTCCGC           CAGTGGGAGGATCGC  45 41
LCQ52_RS08095 NONE
LCQ52_RS08090 NONE
        mtrA NONE
        mtrB NONE
LCQ52_RS08075 1788764 .. 1788778 -  -4.2  -3.52678   AATTCTTCATAAATA               CTCCTC CTC GAGCAG               TGTTTATTTTTTGGA  52 321
LCQ52_RS08070 1787691 .. 1787735 -   -19  -2.91582   TATTTGAGCCACACA TGA-GTGATGGTGTG-GAAGGA ACA TCCTTCTCACACCATCACATCA ATTATTTGGTTCAGT 100 65
LCQ52_RS08065 NONE
LCQ52_RS08060 NONE
LCQ52_RS08055 1783810 .. 1783858 - -34.7  -3.54424   TCCCAGCTTTCCAAA CACGTGTGGGGCGTGCCCCGGGA GAA CCCCGGGGCACGCCCCACACGCT AATGAAAGGAAGAAA 100 169
LCQ52_RS08045 1780952 .. 1780981 - -19.5  -3.29511   CGGATTGCCCGATAA       GGGGCGTATAACA ACGG TGTTATACGCCCC        TTATCTGTATTCAGT 100 78
LCQ52_RS08030 1778893 .. 1778933 - -26.5  -2.62983   CGTAGCTTGATATGA  GTAATGGCGGTTGGAATCA GTC CGATTCCAACCGCCATTAC  TCATATTCGCCCAGC 100 49
LCQ52_RS08010 1773955 .. 1774003 -   -17  -3.35679   CCTGTTCATCCATAA GTAACC-T-GTAGTGACCCCCCTC ATA GAGGGGAGCCACTACTACGGCTAC TTCAGCGACGGCATG 100 22
LCQ52_RS08000 1772091 .. 1772114 -   -16  -4.28774   CTATGCAATGCAAAA          GGCCGCCCGA CTAG TCGGACGGCC           TGAAGCATATTCGCG 100 71
LCQ52_RS07995 NONE
LCQ52_RS07990 1769518 .. 1769540 -  -8.5  -2.53213   GAACGCCGGAACCTA           CACCGAAGT GCAGG ACTTCGATG           TGCCGTATTCGCCGT  56 276
LCQ52_RS07970 NONE
        ligA 1759252 .. 1759262 -  -6.8  -3.61178   CCCAGTCAGCCTAAA                 GGCT GAC AGCC                 CCCCTCATCAGAGGG  60 69
LCQ52_RS07960 1757996 .. 1758019 -  -9.6  -4.37092   ACGCCGCCTACAAAA          GTGTGAGGCT GCGC AGGCTCACAC           TGCCAACAGCCGTTC  86 20
LCQ52_RS07950 NONE
LCQ52_RS07945 1753184 .. 1753200 -  -2.2  -5.08824   GCTTTATGCAAAAAA              TGTGAG GCATA CGCACA              TTTCCCATCAAACGC  74 149
LCQ52_RS07940 NONE
        yicI 1750796 .. 1750833 - -20.7  -4.49981   CATATCAGCACAAAA   GCGTGGTGCCGCAACAC CGAA GTGTTCCAGCACCACGC    TGAAATGTTCATGTC 100 42
LCQ52_RS07930 NONE
LCQ52_RS07925 NONE
LCQ52_RS07920 1748970 .. 1748999 -  -7.3  -2.91912   TCAGCCATTCACATA       TCGGCCGATATTAT CTC ACAAT-TCAGCCGA       GCAGGGCGTCGCGGC  56 18
LCQ52_RS07915 1748127 .. 1748143 -  -3.5  -3.53012   TGGCGGCGCGGGAAA              CAGGTCG CGC CGCCCAG              TACGCGAATCCGGCG  51 46
LCQ52_RS07910 1747346 .. 1747358 -  -4.8  -3.96148   TCTTCTCACCACAAA                GACC ATTCG GGTC                GATTGTAAACAGGCA  60 51
LCQ52_RS07905 1746564 .. 1746583 - -13.6  -3.28791   AGCTCCCTCTGATAA            GCTCCCTC TGAC GAGGGAGC             TGTCGAACGCAACGA  87 60
         efp NONE
        nusB 1743625 .. 1743643 - -11.7  -4.72272   TCCGCCCATGAAAAA             GCCTCCC GAATG GGGAGGC             TGAACAACAAATGAC 100 40
        carA NONE
        carB NONE
        pyrF 1737901 .. 1737916 -  -3.2  -2.94747   GTACGCGATGAGATA              GACACG TACG CATGCC               GCGACATCTGATTCC  42 48
         gmk 1736870 .. 1736890 -  -8.9  -3.40522   ATTCCTGGATTACAA            CACCCGGCA TAT CGCCGGCTG            CGGCTTTGCCTGCGC  63 304
LCQ52_RS07855 1733894 .. 1733907 -  -5.2  -3.54129   GACATCTTCCCGAAA               GCCG ATGTGA CGGC                GATGGGTGAGTTCTG  55 176
LCQ52_RS07845 NONE
LCQ52_RS07840 NONE
LCQ52_RS07835 1731061 .. 1731073 -  -4.1  -3.57651   GTCGATATGACACAA                TCGAA TCA CTCGA                ATTCGAAGGTGTGCA  51 18
LCQ52_RS07830 1729940 .. 1729959 - -16.4   -4.2803   GACCTTAACGCAAAA            CGCCGGCC CGAA GGCCGGCG             TTGCTATATGTGTTG 100 164
LCQ52_RS07825 1728562 .. 1728591 - -10.7  -5.34555   CCAGAGCATAAAAAA       GCGGCTCCGG-TGT GGC ACAACCGACGCCGC       TCCCCAGGAGTAGAA 100 58
LCQ52_RS07820 1728062 .. 1728112 - -16.4   -4.0641   TCTGATCCACATAAA CAG-ATAAGGCGTGCGCCATCAA GACCGA TCGATGACGCACGCCTTATGCAG CTCAGACCACGGATT 100 42
LCQ52_RS07810 1727503 .. 1727514 -  -3.6  -2.83273   TCAAATCAGCAATCA                GCGC AAAG ACGC                 TCGGTCACTCCATCC  43 11
LCQ52_RS07805 1727157 .. 1727172 -  -4.6   -3.3247   AATGGCTATAGAATA              TCCGCC GAAT GCCGGA               ACACACCAAGCTGCC  51 40
LCQ52_RS07800 1726681 .. 1726700 -  -2.8  -2.90982   ACAAAGCGGTAGACA            TCGTACGC ATAT GTGTACAA             CTGTTCACTATGTGT  42 77
LCQ52_RS07795 1725498 .. 1725513 -    -4  -3.75629   GAGGCGGAAGGCAAA              GTGCTGA TCC TC-GCAC              CCGAAGACCTGTATG  56 205
        dapF 1722766 .. 1722781 -    -9   -3.0263   ATTACCGCCTCAACA              TCGACC TCAT GGTCGA               TATACTGTGGATCGT  60 101
LCQ52_RS07770 1720650 .. 1720701 - -15.9  -3.98075   ACATCATCCAAATAA TGTCGTGTACGGTGTTCCGCGCC ACGCCG AGCGCGTAACACCGCACATGACG ACGCAGACACGCGGC 100 407
LCQ52_RS07755 1717266 .. 1717296 - -16.2  -2.81464   TCAGTATGCATTACA       GACGCCCGTCACAA AAA TCGTGATGGGCGTC       TGCGCTGCGCTCCAT  90 3
LCQ52_RS07745 1714342 .. 1714358 -  -2.1  -3.06228   CTCATCAGAAACAAC              GACTGGC CGC GCATGTC              AGGCCTCGCAATGAG  42 24
LCQ52_RS07740 1713676 .. 1713732 -  -2.2  -3.93216   CGCAAATGACAACAA TAGCG-TATGGCCGGCACTGCGCGACAC GTG GTGTCGCATA-CGCGTGCCGTAGCGCTC AATCGCGATGACATT  54 118
LCQ52_RS07735 1713598 .. 1713611 -  -2.3  -2.72855   GAAAGTGGGCAATGA               GGGAC TCGA ACCCC                CGACATCCACCGTGT  39 1
LCQ52_RS07730 NONE
         dxr NONE
        ispG NONE
LCQ52_RS07715 NONE
        recO NONE
LCQ52_RS07705 1705800 .. 1705810 -  -2.4  -3.51934   CTTCGCCTACAAACA                 GTCC ACC GGGC                 GTTTGCTTTACGGCT  47 69
LCQ52_RS07660 1695559 .. 1695574 -  -6.2  -2.70932   CCCTGCCTTCAATCA              CATCAA TGAC TTGATG               CGTGCGGTCCAATGC  50 12
LCQ52_RS07640 1691623 .. 1691635 - -10.5  -3.11281   TGAGCGAAAAGTACA                CCGCC CAG GGCGG                CAAGCTCTACTCCAC  64 90
LCQ52_RS07625 1685850 .. 1685880 - -13.2  -4.43307   TTCCTAAGAAAATAA       GTAGGGGCTCCCCT GAG AGAGGAGCCCCGGC       GTCTATCGCCGCCAC 100 120
        dusB 1684542 .. 1684563 -  -7.2  -2.78679   CTCTTGGAGGGAAAT           TCACGCGC AGAATG GCGCGTGT            TGCGTGTATTTTCAG  55 48
        ftsZ 1683242 .. 1683253 -  -2.2  -3.14132   CGCGTTTTTCATGAA                CCCA GCCA TGGA                 TCAATCCTTTCAGCG  42 35
LCQ52_RS07610 1682702 .. 1682731 - -19.4  -4.05004   GGAGCACAATAAGAA       TCGGCCGACTCC TTGCTG GGAGTCGGCCGA        ATACCGATATAACGT 100 65
LCQ52_RS07605 1682322 .. 1682332 -  -2.4  -3.00022   TTTATGCCAGATATA                 TGCC TCC GGCG                 GGTCAAAAACGGCCT  40 40
LCQ52_RS07600 NONE
        lspA NONE
LCQ52_RS07590 1679238 .. 1679252 - -11.4  -3.14564   TTATTCTGGGATGAA               TCCGGC GAA GCCGGA               ACTGAATCTAAATAT  72 69
LCQ52_RS07585 NONE
LCQ52_RS07580 1677667 .. 1677685 -  -4.4  -3.45737   GAATCACCAGCAGAA             GGCATTCC CGA GGACAGCC             CAAACTTCTCTCCCG  51 309
        dnaE 1673896 .. 1673910 -  -8.5  -2.73124   GGCCAGGGGCGAAAC               CCGCC AATCA GGCGG               CAGGCAAGCAGCTGG  57 18
LCQ52_RS07565 1673225 .. 1673235 -  -5.4  -3.02043   AACTCTTCTTGAATA                 GACA TCA TGTC                 GCATTATTGACGAAC  50 170
LCQ52_RS07560 1671162 .. 1671184 -  -6.2  -2.73701   GTTCATGAAACCAAG           CGAGAAGATC ATC GAACTGCTCG           ACGCCGCGTGATAAC  50 138
LCQ52_RS07550 1669250 .. 1669264 -   -10  -5.00616   CCTTCGTCTAAAAAA               CAGTCC ACC GGACTG               TTTTTTAGACGCCTC 100 69
LCQ52_RS07545 1667079 .. 1667111 - -12.8  -3.24747   CTTCCACACCAGCAA     CCCCGCCGCCATCGCA CCA TGCGAC-GCG-CGGGG     CGCACACCGTCGGAC  83 66
LCQ52_RS07540 1663628 .. 1663640 -  -9.1  -2.50016   TTGCAGGAGGAAGAT                GCGGT CCA ACCGC                CAGGGGTTGGAATGT  59 40
         rrf 1663206 .. 1663237 - -14.5  -3.74077   GTCCAGATACGCAAA      GAGGGAACTCTCC GTCATT GGAGGGTTCCCTC       TTCTATATGCTTTCG  95 156
LCQ52_RS07525 NONE
LCQ52_RS07520 NONE
        hisD NONE
LCQ52_RS07510 NONE
        hisB NONE
LCQ52_RS07500 NONE
        hisH 1655613 .. 1655640 -  -8.4  -2.75993   TTACTTATACACAAT        TTGAGCTCCCTC GTCA GAGGGAGCTTCA         TGCTTTTTTACAGCG  57 33
        priA 1654829 .. 1654846 -  -6.9  -3.21288   GAAGGTAGATTAACA             GTCTCGC TAAG GCGAGTC              CTTTGCCTACTTCGC  56 32
        glnA 1651777 .. 1651804 - -17.8  -4.54449   ACACGCCATAGAAAA        CCCCGCCGATGA CCAA TCATCGACGGGG         TTCGGCACATGTGCA 100 51
        hflX 1643920 .. 1643933 -  -3.1  -3.19463   GCCATGATGGATGAA               CCTCT CTTC AAAGG                CGGTCTGCTGATGAA  45 182
LCQ52_RS07450 1642810 .. 1642826 - -12.3   -5.5112   TCCACGAATAAAAAA              TGCTCCC AAC GGGAGCA              TTCAGCAGGGTATAA 100 146
LCQ52_RS07435 NONE
        nrdR 1639875 .. 1639899 - -18.7  -3.84825   TCGATTGATATGAAA          GAGACCCGTCA TCA TGACGGGTCTC          TTTCATAAGTGCTGG 100 108
        mraZ NONE
        rsmH NONE
LCQ52_RS07405 NONE
LCQ52_RS07400 NONE
LCQ52_RS07395 NONE
LCQ52_RS07390 NONE
        mraY NONE
        murD NONE
        ftsW NONE
LCQ52_RS07370 NONE
        murC 1623030 .. 1623041 -  -3.6  -3.14564   GGACTTCCGGACGAA                CGAC GTGA GCCG                 TTGTCATTGCCCCCG  45 63
LCQ52_RS07360 1621951 .. 1621969 - -10.2  -3.23216   TGTCAGCAGGACCAA             CGGAGCGA ACG CCGCCCCG             GAACCAACGGAACCA  71 71
        ssrA 1621368 .. 1621401 - -16.1  -4.90079   ACGGGAATAAGAAAA     GCCGCTCAGCCTTAC TTTC GTAAAGCCAAGCGGC      TTGTTTCCGCCGAGG 100 46
         dtd 1619129 .. 1619142 -  -3.9  -3.21276   CTCGCCCGCAGAAGA               CTAAA GCGC TTTAG                TAACATATTGGAGGG  47 73
LCQ52_RS07320 1615863 .. 1615895 - -15.7  -3.00923   CCGTAATACGACATA      CTTCTGCCCCCTCAT GGT ACAAGGAGGCAGAAG      CGTCAGGCGAAAATT  93 40
LCQ52_RS07315 1612554 .. 1612567 -  -9.5  -3.29144   CCATCCCCGCCATAA               CGCGC AATC GCGCG                CGACCATGCAGCATC  68 106
LCQ52_RS07310 1609243 .. 1609277 -  -9.9  -3.05596   GACGGTTGGAGGCAA     GGACCATGCCCGGGT TCAGG ACCCGGGCCGAATCC     GTATCAGGCGCGGCT  67 29
LCQ52_RS07305 NONE
LCQ52_RS07300 NONE
LCQ52_RS07295 NONE
LCQ52_RS07290 1604477 .. 1604508 - -15.9  -2.76815   ATGTGTGTGAACAAT      GGCGCACCGATAC CGGTAC GCACCGGTGCGCC       GGATGCGCAAATGTA  86 230
LCQ52_RS07285 NONE
LCQ52_RS07280 1599076 .. 1599100 -  -4.2  -4.30987   ATTCGTCAGAACAAA         CAGCG-GCTCC TAGA GGATCGCGCCG          TCTGCGCCACGTACC  66 10
LCQ52_RS07275 1597670 .. 1597697 -    -2  -2.87132   TCCCGTTTCGAGATA        TGTTGGTTCCC TGCAATG GGGAACCT-CA        AAAAACGGACTTCGA  40 117
LCQ52_RS07270 1596416 .. 1596464 - -29.9  -3.31799   TACAATTCGTGATAA CGAATAGGCAAGGTCCGACGGAA AAC TCCCGTCGGACCTTGCCTATTCC CGTCTCATGCCGTTT 100 78
LCQ52_RS07230 1589006 .. 1589020 -  -8.5  -4.86731   CTTGGCCAAATAAAA               GCCGG TCACC CCGGC               AACGAAACGCGCAAG  95 148
        nagB NONE
LCQ52_RS07215 1585298 .. 1585343 - -12.9  -3.66018   TTACGACGTGAATAA CGGTCACATGATGAGACAAATA TAC TATC-ATCTCACCATGTGACCA TGTTCGTAGACGAAT  86 72
LCQ52_RS07210 1582971 .. 1582983 -  -6.9  -4.64676   GCAGCCGCAACAAAA                GCGCC ATC GGCAC                GCTCGTCGAGCGCAC  78 518
LCQ52_RS07200 NONE
LCQ52_RS07195 NONE
LCQ52_RS07190 1577837 .. 1577857 -  -3.9  -5.56673   ATCGAGAACAAAAAA            CACGGCG ACGCCCA CGCCCTG            TTCCAGTTCGATGGG 100 102
LCQ52_RS07170 NONE
         smc 1567914 .. 1567947 -  -9.6  -3.76952   TCGAGCGAAGCGAAA     CTGAGGGTGGTC TTTCGAGATG GACCACCCTCTG      TCACCTGTGGCGCCA  76 66
LCQ52_RS07150 NONE
LCQ52_RS07145 1563901 .. 1563942 - -16.7  -3.05384   GCGTTTCTTATGGAA CGCTCAAGGCCCGTCTGATG ATA CATCAGACGGGCCTTGTT-G TATATGTCGTTACTT 100 35
LCQ52_RS07130 1560110 .. 1560122 -  -6.2  -3.62597   CGTAGGTGCCAAGAA                GGCC TCTAT GGCC                GATCCCAAGGTGGCG  57 281
LCQ52_RS07110 1556478 .. 1556492 -  -7.8  -2.52464   CGTGTGTCGAACCTA               CTGCAC GGC GCGCAG               CAGACCGCCGAAGCC  53 8
        infC NONE
        rpmI 1555307 .. 1555317 -  -6.8  -3.29511   CTCACTTCTGCAGAA                 GCTG GTG CAGC                 TTCTTGGCCTGGCCG  56 1
        rplT 1554805 .. 1554830 - -17.7  -3.89346   TGCCCATGGTACAAA         GAAACCCCGCT CGGA AGCGGGGTTTC          TAGTGTGAAGTCACG 100 52
        xerD 1553853 .. 1553865 -  -4.8  -3.04715   GACGCGTCGCAAAAT                GGTG TGTCT CACC                GCGCTCTGGGATGTG  47 21
LCQ52_RS07085 1550615 .. 1550635 -  -3.9  -2.94329   CACGTCCAAGCAAAT            CGGTAGGCA TAC TGTCTACCT            TATCAACATCCGGGT  44 277
LCQ52_RS07080 1549782 .. 1549795 -  -2.4  -3.96216   CGTTTATCGAAATAA               TCGT TACGCC ACGA                TGCCGCGAGCAATGA  54 15
LCQ52_RS07075 NONE
        scpB 1548042 .. 1548070 -  -2.5  -2.68612   ATTGAGAGCATAGCA        CTACTTATAGTCA CAA TGACCATAAATCA        CATATCGGATGGTCT  38 78
LCQ52_RS07065 NONE
        nadA NONE
        nadB NONE
        nadC NONE
LCQ52_RS07045 NONE
LCQ52_RS07040 1540486 .. 1540532 - -35.4  -3.53811   TTTACGGCCTTCAAA CGGCAGAACCCCCGCGTCCC TTTCGCC GGGACGCGGGGGTTCTGCCG GTAATCAGGCAAATA 100 66
        typA 1538270 .. 1538299 - -15.9  -4.24342   TTGGTGAGGAATAAA       CT-TAGCTCCCCTC AGA GAGGGGAGCTAGAG       AGAATGGTCGGCTAC 100 53
LCQ52_RS07030 NONE
LCQ52_RS07025 NONE
LCQ52_RS07020 1535575 .. 1535598 -  -4.5  -4.25104   GTCTTCTCACGAAAA          CAAGCGGGA ACTTCA TCCCCCTCG           CGCGGCCTTCTTCGT  66 90
LCQ52_RS07010 NONE
LCQ52_RS07005 1532880 .. 1532896 -  -6.5  -3.34013   GAGTTTGTTAACCAA              TGTCCAC ATA GTGGTCA              TGCCCGCGGAAAGGC  58 23
LCQ52_RS07000 1530930 .. 1530955 - -14.7  -5.24796   CGCACACAACAAAAA         GGGCGGGGATC TTGC GATCCTCGCCC          TTTATTTCCGAACTA 100 70
LCQ52_RS06995 NONE
LCQ52_RS06990 NONE
LCQ52_RS06985 1526660 .. 1526695 - -20.8  -3.25942   ACCTGCGCATACGAA    TATTGGGTTCTTTCCA CGGA TGGAAAGAACCCAATA     CAATGCGCTCAAACG 100 48
LCQ52_RS06975 NONE
LCQ52_RS06970 NONE
LCQ52_RS06965 NONE
LCQ52_RS06960 NONE
LCQ52_RS06955 1519214 .. 1519241 -  -7.6  -3.57731   TGAAGTATGAGACAA        TCGCGCCGCCGT CTCA ATGCCGACGCGA         GAGCTTGCCCGTCAG  62 11
        acnA 1516318 .. 1516345 - -21.4  -4.08767   GGCATGCGTGGAAAA        GGCCGGTATCCG TTGG CGGATACCGGCC         TTGCTCTCCTCAGTC 100 87
LCQ52_RS06945 NONE
LCQ52_RS06940 1514950 .. 1514964 -   -10  -3.14344   GAGGCGCGGCAGGAA               GAGTCG GTC CGACTC               ATCGTGGAATACTGG  64 469
LCQ52_RS06915 1509122 .. 1509134 -  -4.8   -2.6186   ACCGAATGTCATAAT                CGCT CCTTT AGCG                TTTGTTCCAGTACCA  44 190
LCQ52_RS06910 1508145 .. 1508167 - -14.8  -4.86133   GACAGACATGAAAAA           GCCCGGCCAC AAT GTGGTCGGGC           TGTGACGTTTGACGG 100 77
LCQ52_RS06905 1507043 .. 1507057 - -11.4  -3.05816   TGAGGTGCTATGGAA               TCGGCC TGC GGCCGA               TTCATTCACCGTTGC  72 31
        miaB NONE
        miaA 1503244 .. 1503259 -  -4.6  -3.59979   GTTGCGTACCTCAAA              CACCAC ACGT GAGGTG               ACGAACGACCGGGCT  55 473
LCQ52_RS06880 NONE
        pgsA 1498987 .. 1499014 -  -4.8  -3.05844   TCCCGCATTGGAATA        TCCGTCACTTCCG CTT CGGG-GCGACGAA        CGTGTTGTACAGGTA  47 2
LCQ52_RS06870 NONE
LCQ52_RS06865 1497797 .. 1497821 - -14.3  -4.82667   GCAGGACAGCAAAAA          CCCGCATCGCC ACA AGCGATACGGG          TTCACAGCTAGACAT 100 75
LCQ52_RS06860 1497447 .. 1497460 -  -6.7  -3.07104   CTATAACCACACACA               CGAAC ATTT GTTCG                AATTTGGCGTGCAAC  54 91
        recA 1495993 .. 1496030 -    -5  -3.05384   TGTCTTGCGACGCAA  CAGGATT-GCGCCGCAAG AACG CTT-CGGCACTAATCATG   TTCAGGCCTTAGCTG  50 27
LCQ52_RS06850 1495211 .. 1495231 -  -7.5  -3.60792   CGGGTAAGGGTGAAA            CGGCGGTGT AAG AGACCACCG            GGCCTCTGGTAACAG  62 230
        raiA 1493832 .. 1493860 - -19.7  -5.14563   CTTCTTACGAAAAAA        TGGACCGCCTCCA TAT TGGAAGCGGTCCA        TGCGGTATCAGCTGA 100 62
        secA 1490793 .. 1490814 - -15.9  -4.55118   GAACCGCATAGAAAA           TGGCTCCCC GTGT GGGGAGCCA            TGAGCTAGTTACTAA 100 52
        trpD 1488507 .. 1488527 -  -5.4  -3.67967   CATATAGACACATAA           GCCCCCCTC ATCA GAGGAGG-C            TGAGTACGGTGTATC  58 39
LCQ52_RS06820 1488210 .. 1488224 - -11.4  -3.17392   GAGCCGTTAAGCGAA               CAGCCC AGT GGGCTG               TTTGTAGGCGAGGTG  74 107
LCQ52_RS06810 1486652 .. 1486680 - -15.4  -2.74563   GTGAGATTTGAATGA       GGCTCCCTCTGTC TTCA GAC-GAGGGAGCC        TCATTTGTTAATTAC  83 37
LCQ52_RS06795 NONE
LCQ52_RS06790 1480611 .. 1480641 - -11.3  -3.53091   ATTTTTCTCTTCAAA      TGCTTGGCTCCCCTC ACA GAGGGGAGCCA-G-A      TGATCATTGATCCAG  77 29
LCQ52_RS06785 1478150 .. 1478170 -  -8.9  -2.66695   CCTCTGACGAAATAG            CTGTCCGCC AAA GACGGACTG            AGGGGAGAGAAATAC  59 124
LCQ52_RS06780 NONE
LCQ52_RS06775 NONE
LCQ52_RS06770 1470477 .. 1470501 -  -2.8  -3.68222   GCCGAAGCCGAACAA         CGCTCG-GACA ATGC TGCCTCTAGCG          CACAAGCTAACGTAC  54 422
LCQ52_RS06755 1465189 .. 1465213 -  -5.7  -3.65812   GCTCGGCGAACAGAA          TCCGGAATCAG CCA CGGATTCCAAA          CTCAAGCCGACGATT  57 518
LCQ52_RS06745 NONE
         dut 1463663 .. 1463676 -  -5.2  -3.07935   ACCTTAGTCATTCAA               CCGG CCTAAT CCGG                TCAGGACGCCACTCC  50 26
LCQ52_RS06735 1461051 .. 1461096 - -15.6  -2.69151   CGCCGCCAGATACGA CTG-GAGGGACACACCCCGGA GGAAT TCCGGAACATGTCCCTCACAG CCTAATCAGGTACCC  85 148
LCQ52_RS06715 NONE
LCQ52_RS06710 1457791 .. 1457813 -  -6.3   -2.9155   GTTCCGAAGACCATA          CCGTCGATGA ATGT TC-CCGACGG           GTCGCGGGAGAAGAC  51 61
LCQ52_RS06700 NONE
LCQ52_RS06695 NONE
LCQ52_RS06690 NONE
LCQ52_RS06685 NONE
LCQ52_RS06680 NONE
LCQ52_RS06675 NONE
LCQ52_RS06670 1452592 .. 1452623 - -19.5  -3.89956   GCAGGAGACAGGAAA      GGGCCGTCCCACG GATGTT CGTGGAACGGCCC       TGAAAGAGAAACGGA 100 51
LCQ52_RS06665 1447955 .. 1448001 - -33.2  -3.75153   GGTGCGCAAGGGAAA GGGGTGGCAGGCCGGATCCGAC CTC ATTGGATCCGGCCTGCCACCCC GTTCTGGTTTCCATG 100 237
LCQ52_RS06650 NONE
LCQ52_RS06645 1442915 .. 1442927 -  -2.6  -3.84825   CTCACCCACACCAAA                CAGC GAAAG GCCG                AAATTTTTCTTCCCC  52 455
LCQ52_RS06640 1441294 .. 1441326 - -16.5  -4.89393   CAAAGGGCATAAAAA      TCCCCAGCAGTAAAA TAC TTTTACCACTGGGGA      TTATAAGTTGCGGAC 100 325
LCQ52_RS06630 1439300 .. 1439319 -  -6.3   -4.1466   ACTCAACCTTGAAAA            CGCTGCC GCATAG GGCGGCG             CCCCCCTGTTCCCCA  67 96
LCQ52_RS06580 1429533 .. 1429543 -  -2.4   -4.4261   CGTCGAAGACTAAAA                 CGTC ATC GCCG                 TTCCCGGCCAAGGGA  62 371
LCQ52_RS06565 1427637 .. 1427651 -  -5.6  -3.07113   CACGATCCGACGGAA               GATGGC CTC GCCCTC               ACGGTCGGGATCGCA  50 378
LCQ52_RS06555 1425025 .. 1425039 -  -2.7  -4.38927   CCCGGATATAAGAAA               GCCGG ATCCA CCTGC               GCGAACCGTGATTAT  64 120
LCQ52_RS06550 1424276 .. 1424296 -  -4.6  -3.28712   TGGGCCGTTCGAGAA            TCCACTCG GCGAA CGTGCGGA            TAAGGATGGACGCGA  50 318
LCQ52_RS06530 NONE
LCQ52_RS06525 1419816 .. 1419838 -  -3.3  -4.03204   GAGGAAACGCAGAAA           GCGGCTTCA TTACC TGGAGTCGC           TAAGCCGATGCGTCT  58 251
LCQ52_RS06510 NONE
LCQ52_RS06505 1417712 .. 1417768 - -19.6  -3.21807   GCATCAAACGGAACA GACCCACGCATCTAAGCGTTGCGGCA TCTGC CGTCGCAACACTTAGATACGTGAGGC GTTATCCGAAAATCA 100 38
LCQ52_RS06485 1412973 .. 1412998 - -15.5  -4.92239   CTAAAAAGCGAAAAA         GTGGCTCCCTC TGAC GAGGAAGCCAC          CAATACGTCAGCTAA 100 41
LCQ52_RS06475 1410788 .. 1410798 -  -5.4  -2.67694   ACCATCACCAGACGA                 TTGG CTG CCAA                 CTTGGCATGTGCGGT  46 4
LCQ52_RS06470 1409632 .. 1409660 -  -9.6   -3.6502   CAGTCGGGAGCGAAA       TCCGCGC-CGC ATCGGACG GCGAGCGCGGA        GCATGCTACGGCTGG  74 77
LCQ52_RS06465 1408735 .. 1408749 -  -7.8  -3.02745   GTCACTCATAAATCA               GCAAGG TAG CCTCGC               AACTGGACACGTCGT  57 47
        leuS 1405598 .. 1405631 - -16.1  -3.96624   GATGGTTATGAGAAA     CGCCCATGCATCCAC GCTG ATGGATTCATGGGCG      TTTGTCCAGCTGAAA 100 159
LCQ52_RS06455 NONE
LCQ52_RS06450 1403065 .. 1403081 -  -2.2  -3.08679   TTGCTGCACCGAATA              CCGCAT TGGCT ATTCGG              CTTGCCGCCGCGTAA  42 18
LCQ52_RS06445 1401554 .. 1401578 -  -4.2   -2.8294   CAGGTTGGACAATGA          CCTGCCGG CATAACGGC CCGGCAGC          ACTCCGCGATTAGGC  45 35
        holA NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD 1397226 .. 1397243 - -12.7  -3.67296   CAGGAGCCATCGAAA             GCCTCGG TTCT CCGAGGC              TTTTTTATTTTCATC  86 192
LCQ52_RS06410 1395829 .. 1395841 -  -4.7  -3.05022   CTGGGGATAGACATA                GCCGC GTT GCCGC                TTTCCAGTCTCGGGA  47 108
LCQ52_RS06345 1385073 .. 1385100 -  -6.2  -3.64703   GGCCCTGGATGGAAA        GGCGTCGCCA AGGTCAGG CGGCGAAGCC         GAGCAGCGGCGCGAA  60 11
LCQ52_RS06340 NONE
LCQ52_RS06335 1382125 .. 1382143 -  -8.9  -2.91912   GTATCCATGGACATA             TCCATGG GGTAT CCATGGA             CATATCCATGTGGGT  62 188
LCQ52_RS06330 1381485 .. 1381497 -  -9.1  -3.47494   ATCCAAGGACTACAA                GCGGA CCG TCCGC                AAAGCCTGACCCTCC  68 7
        mobC 1378638 .. 1378648 -  -8.2  -3.65046   TTCGGACGGCAACAA                 GCGC ACC GCGC                 TGATGGTTGCCAACC  65 355
LCQ52_RS06305 1376260 .. 1376280 -  -5.4  -3.01712   GGCTGGCCTTCAACA           CGTCGTCCG CCAA CAG-CGACG            CACATGCGAAGAACT  47 476
LCQ52_RS06220 1359077 .. 1359116 - -11.4  -3.17763   TGGAGATGTCATCAA  GTCGGCTCCGACCCGC AAGGAAGA GCGGGCCATAGCCAAC   CATCCGTCTTTGAAA  67 222
LCQ52_RS06085 1331400 .. 1331411 -  -2.2  -3.10895   TGGAAGACAGACAGA                CCAT CGCC ACGG                 ATATCGCTCAGGCCT  41 297
LCQ52_RS06070 1327161 .. 1327191 - -13.4   -3.8572   TACAACATCACGAAA      GGCGCGC-CAAGT CAAACT ACTTGAGCGCGCC       TTCGGGCAAGTTAAG  93 87
LCQ52_RS06065 1326542 .. 1326559 -  -5.5  -2.80291   AACCAGCCTATGACA             CGGCAGA ACCG TCTTCCG              CTACCAGCGTAGGAA  47 66
LCQ52_RS06060 NONE
         def 1323802 .. 1323827 - -14.1  -6.15828   GGTACTAAAAAAAAA         CAGGCTCCCCTC TCT GAGGGGAG-CTG         TCGCCGTAGGCGACT 100 125
        rpsB 1322684 .. 1322717 - -14.7  -3.18264   TTGCTTACCCATGAA     CGATGGGAAGCGC TCATTCAG GCACTTCCCATCG      TAGAGCATCACTCGG  95 33
         tsf 1321716 .. 1321758 -   -23  -3.02829   GACACCCTTGGAATA GCGAAACGCCATCCGATTAT TGA ATAACCGGATGGCGTTTCGT TGAAATTACGCTAAG 100 62
        pyrH NONE
         frr NONE
LCQ52_RS06030 1319182 .. 1319226 -  -7.3  -2.87564   TGATTTCCCCATATA TG-GC-ATGTGGCACCGTGCG ATATA CACACGATGCCACATTGTTCA TGCACGAGACATGCG  56 43
        rlmN 1317831 .. 1317854 - -11.8  -2.52676   GATGCGCTGAAGTGA          CGGAATC-GCC GCA GGCCGATTCCG          TCACCGAAACTACCG  71 35
        hisF 1316293 .. 1316307 -  -2.8  -3.15544   GCGCACTGCCACGAA               CAATTC ACT GGATTG               TTCGTCCAGCGGGAG  43 55
        hisI 1315801 .. 1315824 -  -2.2  -3.07816   CCCCCAGTCAGGGAA          GCCCGTTCTA CTGC TCGGCCGGGC           GATGGCCTTCGACCA  42 9
        trpE 1314117 .. 1314157 - -29.9  -3.03006   ACTAACGTACAGACA  GCGATGCCCCCGCCGACAA CTT CTGTCAGCGGGGGCATCGC  TATGCGTTGAACGTT 100 39
LCQ52_RS05995 NONE
LCQ52_RS05990 1311453 .. 1311479 - -10.2  -2.77962   CTCCACACGCGAAAT         GCCTTGGCAC CAAGTAT GTACCAAGGC         GCTGAAATCTCAGAC  66 49
LCQ52_RS05985 1310768 .. 1310786 -  -5.9  -3.01712   TCCGGCCGCCGAAGA             CAGCCCG TTCCG CTGGCTG             CTTGCCATCAATCCG  49 303
LCQ52_RS05960 NONE
LCQ52_RS05955 NONE
LCQ52_RS05950 1301306 .. 1301318 -  -6.9  -3.03159   CGAATCGTCTTAATA                CCGGC GAC GCCAG                GACTGCTCATTCGGC  54 32
LCQ52_RS05945 1299934 .. 1299948 -  -2.8  -2.82253   AACGCAAAACAACAG               TTCGAT AGT ATCGGA               TAGCAGTGCCGGACC  41 144
LCQ52_RS05940 1299241 .. 1299275 - -15.1  -3.29324   TGGACCGAAACGCAA    GAGCCGG-C-CCCCAAG ATA CTCGGGGCGTCCGGCTC    TCACTTCCATTTCCC  95 84
        uvrA 1295908 .. 1295927 -  -2.1  -3.14132   CCTCCTCGCTATTAA            GCCAATC ATCAGG GATTGGG             TGGGTTGGGGTGTGT  42 132
        uvrC 1293477 .. 1293514 -  -6.9  -2.92018   AATATGTCAACCACA   GGCCCCGCAACCGAAAA TTTA CTCTGGGCTGCTGGACC    GGGCCGGCTCACTGC  53 34
LCQ52_RS05925 NONE
        rapZ NONE
        whiA 1290220 .. 1290250 - -14.9  -4.63932   CATTCCGGAACAAAA      CACCGCATTC-GTC TACT GACTGAATGCGGTG       TTTTGTCACATCGTT 100 83
LCQ52_RS05910 1288899 .. 1288925 - -15.2  -4.22949   CTTCTAAAAAAAAAC         GTAGCTCCCCTC AAG GAGGGGAGCTAG         AAAATGGATTACTCA 100 34
        tpiA NONE
        secG 1287689 .. 1287733 - -17.9  -3.52079   TAATACTCGATAGAA CGCATACGACCCATGACCG ACGGTAA CGGTCATGGGTCGCGAGCG ACAAGTCTATATGGC 100 52
LCQ52_RS05895 NONE
LCQ52_RS05890 NONE
LCQ52_RS05885 1284193 .. 1284215 -  -2.8  -2.77899   CGCCTGTACCAAGGA          TCAGCT-CT GCCAGT AGTAGCTGA           AGAAGTCGGAGATCT  41 3
LCQ52_RS05880 1283586 .. 1283601 -  -3.2  -3.81951   CTTCATATCACGAAA              CAACGG GCAC CCGTTT               TGCGAGGCATTCTAT  54 2
        hrcA NONE
        dnaJ 1275420 .. 1275467 - -18.6  -3.07685   AAAACCGGTTAAAAC GAAAAAAGCCGCTCAGCCCTAC TCCC GTAAGGCAAAGCGGCTATTTTC CAACCCACTCTCAGC 100 36
LCQ52_RS05830 1271684 .. 1271710 -  -2.9  -3.59979   TTCCTCGACGCCAAA         GGCGAGCCG CTGGGAGGC CAGCTCGTC         TCGAACGGCGCTGCC  51 249
LCQ52_RS05805 NONE
LCQ52_RS05800 1267945 .. 1267955 -  -3.2  -2.95081   TTAGGGAAAATATTA                 CCTG TTC CAGA                 TTGCGATCCAGCTTC  42 12
LCQ52_RS05795 1267197 .. 1267210 -  -8.1  -2.69799   GCACCGGATATACCA               GCCGA TTCG TCGGC                ATATCCGGCTGCTGG  54 437
LCQ52_RS05685 NONE
LCQ52_RS05680 1250342 .. 1250360 -  -7.4  -4.60255   AGAAGTGTCGAAAAA             CCCAGC TCATGTG GCTGGG             TTTTTCGCGTATCTA  83 38
LCQ52_RS05565 NONE
LCQ52_RS05560 NONE
LCQ52_RS05555 1236450 .. 1236462 -  -5.5  -3.62046   GGATCCGCGCAACAA                GCCCA GCA TGGAC                CTGTTCACACGATTC  57 279
LCQ52_RS05540 1234441 .. 1234477 - -17.3  -3.34895   TCCATGCTGAAGTAA    CAGACTTGGCTCCCCTC TCT GAGGGGAGCCAAGAACG    CATCCACTCTCAGCT 100 112
        uppP 1232482 .. 1232497 - -10.4  -3.39896   CCTATACACACAATA              CTCCCG CTGA CGGGAG               CTGGCTCGCGTAGCG  73 148
LCQ52_RS05520 1231371 .. 1231393 -  -4.1  -2.52464   CGCTTGGCTAACCCA           CCGTAAGGT CTGTC AACTCACGG           ACCTAGAGCGGACAA  42 30
LCQ52_RS05515 NONE
LCQ52_RS05510 NONE
LCQ52_RS05505 1231040 .. 1231065 -  -6.8  -3.54543   AGCTATGTCCGCAAA         GGAATCCGCC GTGAGA AGCGGAATCC          AGTGGGCGATGTAGG  60 26
LCQ52_RS05500 1230937 .. 1230952 - -10.4  -5.28683   ACCAATACGAAAAAA              CCTCGC CGAA GCGAGG               TTTCGTTGTGGAGCG 100 34
        thrS NONE
LCQ52_RS05490 1228004 .. 1228014 -  -5.4  -3.51137   AATGACCTGACATAA                 TGCT CCT AGCA                 ATTATTGAAACGGAT  55 153
LCQ52_RS05485 1227240 .. 1227255 -    -9  -2.89447   CGCCAAGGATAATCA              CGAGGA TTAC TCCTCG               TCGAGCTGGGCCATC  62 16
        ruvC 1226632 .. 1226649 -  -6.3  -3.10796   CTCCAGGATTCAAGA             CTCGAAC AACT GTTCGAA              AGTATACTACATGCC  52 32
        ruvA NONE
        ruvB 1224864 .. 1224884 -  -5.4  -2.90992   AACTCCTTCAAACGA            GCGACATT GACGA AACGCCGC            CAAGTGTGCAAACAG  49 49
LCQ52_RS05465 NONE
LCQ52_RS05460 1223690 .. 1223730 - -13.4  -3.09516   TCCCTGACTATGTAA TTGGTCCGGCATGTAACTG TACA CAGT-ACATGCCGGACCTT  GAAAACTGACTGTAC  84 59
        sucC NONE
        sucD NONE
LCQ52_RS05445 NONE
        purH 1218476 .. 1218532 - -27.6  -3.07787   AATAGCAGGCGAATA GCAAAGGTGGGATTCCGCTTGGACCCG TTGA CGGGTC-AGGCGGAATCCCACCTTTGT GCGTTTTGGCTGAGC 100 63
LCQ52_RS05435 1217920 .. 1217936 -  -2.1  -4.18018   GGGTCTTACGCAAAA              TCCGCTG CAG CAGCTGT              GGGTATTCTGGATTA  59 211
LCQ52_RS05425 1216296 .. 1216308 -  -3.4  -3.01041   AACGCGAATCACAGA                CCAA CCTCC TTGG                ACAGCGAACGGACTT  43 6
         der 1214122 .. 1214154 - -10.1  -2.82208   AAAGCACCGAGTAGA      TAATTTACCAGATAT TTG AAATCTGGCAAATTA      CGCGCGTGTCACTTC  64 34
LCQ52_RS05415 1213977 .. 1214016 - -12.8  -4.87318   CTGAAAACGGAAAAA  CCCCGGAAGACAACCACT CAAA AGTGGCAGAATTCCGGGG   CTAATCGGTCGGGCC 100 33
LCQ52_RS05410 1212173 .. 1212198 -  -6.1  -3.28791   ATTGTTTCGTTATAA         GTGCGTATGAG TTTC CCCACACTCAC          TCTATCTTAGAGGCT  54 106
LCQ52_RS05405 1210212 .. 1210233 -  -2.9  -2.52015   GCCATATCCACCAAG           GCATGAAAG GCTC CTTACTTGC            TCTCGCTGATGCTCA  40 18
LCQ52_RS05400 NONE
LCQ52_RS05395 NONE
LCQ52_RS05390 1206777 .. 1206805 - -11.8  -2.93073   TTGTTCCAACAATGA        TTATGCCCAGTC GGGAT GACTGGGCATCA        AGTTCACGTGTTGTT  75 51
LCQ52_RS05385 NONE
LCQ52_RS05380 1205275 .. 1205293 -  -8.1  -3.57144   CTGTTCACGCCGAAA            CG-CCGGC GGCC GCCGGTCG             ATCCGGTCGACTGGT  65 434
LCQ52_RS05310 1193751 .. 1193775 -  -5.7  -3.78934   CGGCGTGGAGAACAA          GGCGAACGT CGGCGTC ACGTTCGAC          ACCTGCCATGTGTTG  60 464
LCQ52_RS05300 1191659 .. 1191674 -    -9   -3.5393   ATCAGCCCCTTGAAA              CGGAGA TAGA TCTCCG               GCAAGTGCCAAATCA  68 57
LCQ52_RS05295 1190492 .. 1190518 -  -4.3  -3.64866   ATATGACAGTGGAAA        CCCGGCCGCGAG AAGG CTGGCGG-CGTG         CGGCGTTCTATGTGG  53 185
LCQ52_RS05275 1187406 .. 1187417 -  -4.4  -3.35597   CTCACTGTTCAAAGA                CATG GCTT CATG                 GTAGCGCCGGACGCG  51 59
LCQ52_RS05270 1186848 .. 1186873 - -12.5  -3.01712   TGTCGCCCGCGAATA         CCGCGGTCACG GCTA CGCGACCGCCG          GGCTCAAGCTCACGC  71 263
LCQ52_RS05240 1181666 .. 1181692 - -10.1  -3.12803   CACCGACAGCCAATA        GCGTGCGCCCTC CGCG GCGGGCG-ACGC         CCAGATGCCCAGCAC  67 391
LCQ52_RS05230 1180505 .. 1180519 -  -9.2  -3.24924   CCGCCACGTACAATA               CGGCGC AGG ACGCCG               CGATCACCGGATGCC  65 29
LCQ52_RS05215 NONE
LCQ52_RS05210 1176271 .. 1176326 -  -8.8  -2.84634   TCGCAGATCAGCAGA TCGGGA-TCGCCCACCAGCGCTCGGGC GAT GGCCACGCGCTGCTGTTCGCCTCCCGA CAGGCGCGACGGCAT  60 467
LCQ52_RS05200 1174864 .. 1174889 -  -8.3  -3.06796   GTTTACCGGATGCAA         TCGATGATCGG AATG CCGACCATCCA          GCTGTCGGCGGGCTT  60 60
LCQ52_RS05195 NONE
LCQ52_RS05190 1174137 .. 1174147 -  -2.4  -2.78679   CTGCCGCACTCAAAT                 CGCC GTC GGCT                 GGTTCAAAGCAGGAT  39 9
LCQ52_RS05185 1173383 .. 1173400 -  -4.7   -3.1978   ACCGGGACATCAAGA             CCGCCCG CACC CAGGAGG              CGCAGAATCAAACCG  48 455
LCQ52_RS05170 NONE
LCQ52_RS05165 1171398 .. 1171410 -  -7.7  -3.55761   CATGCAGTCTTGAAA                GATGC GAT GCATC                GCATTATGCTCGGCC  62 241
LCQ52_RS05140 NONE
LCQ52_RS05135 1167962 .. 1167979 -  -2.7  -4.18494   GATGCTGAGTCAAAA             TCAGC TTCAAGGG GCTGA              TTTGGCGTTTGCCGG  58 223
LCQ52_RS05130 1166253 .. 1166266 -  -3.1  -3.16881   TACGTACTTCAGGAA               GTGAC GTGT ATCAC                ACTATGGTCATGTGT  45 41
LCQ52_RS05110 NONE
LCQ52_RS05105 1162604 .. 1162622 -  -3.8  -4.07687   ACGGCGGGCGGAAAA            CGGC-CG AATCCG CGTGCCG             TCCCACACCTCGTGC  60 163
LCQ52_RS05100 NONE
LCQ52_RS05095 1159345 .. 1159399 - -11.4  -2.80816   CTGCGATTTAGTATA GGGGGTTTCATACGTTGGCTCCCCTC TCT GAGGGGAGCCAACATACGGAATCATG CGATGACGTCGGCGA  69 21
LCQ52_RS05090 NONE
LCQ52_RS05085 1157533 .. 1157561 - -22.5   -4.1964   CTCAATAGCGCAAAA        GCCGGCCCCTGAG ATA CTCAGGAGCCGGC        CCTTACTTCCATTTC 100 103
LCQ52_RS05005 NONE
LCQ52_RS05000 1137807 .. 1137839 -  -5.6  -2.70932   TGCTCGGCTCAATGA     CACCGG-AGCGCATCC GCC AGATG-GCGGCCGGTG     CCGATATCGAACTCG  46 134
LCQ52_RS04990 1135649 .. 1135661 -  -4.1  -3.22951   GACAGTCTTAGAACA                CAGTC TAG AACTG                TCATGGCATGTTCAC  47 120
LCQ52_RS04985 1135217 .. 1135231 -  -2.8  -3.51924   CCCGGACCTACACAA               TCATCG CCA CGACAA               TCTCAGAAAACACCG  49 3
LCQ52_RS04970 1132553 .. 1132563 -    -4  -3.68222   CCTTAATGCGAACAA                 CATA CGG TATG                 TGGAAGGCGCTCAGT  53 453
LCQ52_RS04955 1129458 .. 1129476 -  -8.8  -4.08216   TTACTGTGCTGAAAA             TGCACGCG AAG CGCACGCA             AATGATGTTGAATGC  80 245
LCQ52_RS04945 1126794 .. 1126813 -  -2.8  -2.70932   GTGGTGTCGGAATCA            CGGCATGGT GAT AGCA-GCCG            CATGGGAACAAGCTA  41 38
LCQ52_RS04940 1126060 .. 1126081 -  -4.4  -3.36515   CGTTATCCTGAAATA           CATAGGGC AAGGAG GCCGTATG            ACAGCAGAAGTGGAT  48 474
LCQ52_RS04930 1124703 .. 1124720 -  -7.7  -3.86015   GACTCGCTTGACAAA             CTGCGCA AGTT TGCACAG              CGCGATCATCTCACA  68 362
LCQ52_RS04875 1111863 .. 1111888 - -16.1  -3.27476   ATTTTCAAGGATGAA         GGCCGGCACTC ATAA GGGTGCCGGCC          GGTATCAGGCGGCCA 100 30
LCQ52_RS04865 1109718 .. 1109732 -  -3.4  -4.09511   AACAGTTTTCGAAAA               GTCCGC ATG ACGGGC               GACTGTGAGCACGCT  58 323
LCQ52_RS04850 1106885 .. 1106911 -  -6.6  -3.62046   TCATCTCGTGAAGAA         CGTACGCTGA GTCGTCG TAAGCGTACG         GTTTTCACGAAATGG  62 50
LCQ52_RS11090 NONE
LCQ52_RS11085 1105994 .. 1106007 -  -3.8  -2.65007   AAAGAAAGAATATAT               GGAC CCCGTT GTCC                CGGTTATTGTTCAGT  42 159
LCQ52_RS04845 1104121 .. 1104137 - -13.7  -2.89564   TCGCTATGCGAGACA              GCTCCCG CAG CGGGAGC              GAGTACCGGAAAGGA  81 298
LCQ52_RS04835 1101457 .. 1101479 -  -9.8  -2.59683   ACCGTATCCGATAAT           CATCGAGTGG TGC CCACTCGTCG           TGGCCGGTTGCTCAA  59 163
        rpsT 1097760 .. 1097799 - -18.8  -2.94912   CTTTGAACGGAGATA  CAAAAAGTCCCGCAAGCC AGAT GACTTGCGGGACTTTCTA   AAACCTTAAGAGGCT 100 46
LCQ52_RS04795 1091590 .. 1091606 -  -7.9  -3.29471   TCTTGATGAGATCAA              CCCGCAG TTC CCGCAGG              CCAACGTGGCTCTGG  58 418
LCQ52_RS04775 1086469 .. 1086488 - -13.6  -5.24989   GTATAGACGAAAAAA            GCTCCCTC GTCA GAGGGAGC             TTTTGCTATACGGTT 100 40
LCQ52_RS04740 1080749 .. 1080767 - -14.6  -4.96646   GCAGATAACGAAAAA             CCCCTTGC AAT GCAAGGGG             TTTATCTGTGCCCGA 100 34
LCQ52_RS04735 1079808 .. 1079822 -  -2.8  -2.72049   TAGATTTGTTAAGGA               TCCG GCCTTTT CGGA               GCGCGTGCGATTCCT  41 40
        glgC 1078345 .. 1078373 - -21.9  -2.62983   GGGAGCTCTATACGA        GAAAAGCCCCGCA TGA TGCGGGGCTTTTC        CATGTCTGGACTGGT 100 44
LCQ52_RS04680 1067144 .. 1067162 -  -9.6  -3.68244   ACGACGAAGCCGAAA             TGGTGCAC TGG ATGCACCA             AGCCGCCGACGAGAA  71 343
LCQ52_RS04660 1062962 .. 1062976 -  -4.2   -4.1822   GCCGAGGTCAACAAA               GCCG ATTACTA CGGC               AAAGTGACGCGAGTC  63 437
LCQ52_RS04625 1055141 .. 1055187 - -15.9  -2.96984   CAAATCCAGGACATA CCGCTCGAACCCCGC-GCTTCT TTCA AGAAGCCGCGGGGTTCCTGCGT TGTAGGGCGATTACT  87 36
LCQ52_RS04595 NONE
LCQ52_RS04590 1046594 .. 1046629 - -17.8  -3.66908   CTCTCCCAAAATCAA    TGATGCCCTATCATCC TGCA AGACGATAGGGCATCA     TCATGTGATTATGCG 100 63
LCQ52_RS04570 1043432 .. 1043443 -  -3.6  -3.54447   CACATTCTACAAACA                GGCG CTCG CACC                 GCTCGGCTATATCGT  51 442
LCQ52_RS04560 1042446 .. 1042460 -  -2.8  -2.91144   TCATGGGCCAAACCA               GACG AAACGAA CGTC               GATGTAGGGTTCGGT  42 162
LCQ52_RS04555 1040714 .. 1040732 -  -5.2  -3.53444   GCACGGCGGCGGAAA             CCGGCA TAAGCGT CGCCGG             CTGGTCCGGCTCGCT  53 160
LCQ52_RS04535 NONE
LCQ52_RS04530 1034615 .. 1034625 -  -8.2  -4.63932   GAGCTGTGAAGAAAA                 CGCC GGA GGCG                 TTTTTAGGCGAGGGT  87 150
LCQ52_RS04505 1028451 .. 1028474 - -11.6  -2.57132   TGCGTTCCGCACAAC          CCCGCACACG CGGC CGCGAGCGGG           TCGACCGGTCGTACG  65 110
LCQ52_RS04475 1021460 .. 1021470 -    -4   -3.9461   CTCTCCCAAGAAGAA                 TTTG ATG CAAA                 AAAGCACGAAATTCT  58 170
LCQ52_RS04455 NONE
LCQ52_RS04450 1015277 .. 1015291 -  -4.2  -3.85817   ACCGCCTCCGATAAA               CTCGCC GCC AACGAG               CTGGGATGGAGCATC  58 513
LCQ52_RS04440 1012811 .. 1012841 - -12.7  -3.18536   AGAATGAATGGAATA       TGAGGCTTCCC TTCTCGCGG GGGAAGCCTCA       TTGCTTTGTCCGCGG  83 68
LCQ52_RS04430 1009694 .. 1009732 - -20.4  -5.36441   GTTGTATATAAAAAA   GTCCGGTGCAACGCACGA TGA TAATGCGCTGCACCGGAC   CTACTGCAGAAACAA 100 44
LCQ52_RS04425 NONE
LCQ52_RS04420 1008352 .. 1008373 -  -8.7  -2.87146   TCCTCGCAGAATAAT           GAGCTTTGC CATA GCCAAGCTC            CTTTCGTTGTGCTGT  62 99
LCQ52_RS04415 1006737 .. 1006751 -  -4.3  -3.44229   ACGGCATCAGTACAA               TGTTC GTAAT GAACA               GTTGTTCGCGCAAGG  51 195
LCQ52_RS04410 1006268 .. 1006315 - -14.3  -3.01428   GCGAAACACAAGAAC CAAGGACTCATCCCGGTG-CTC GCGGT GAGTCGTCGGGATGAGTCCTTA TATGGCTCGGAAGCT  91 23
LCQ52_RS04405 1005626 .. 1005658 -  -4.8  -4.67982   CGGCAGTCAAGAAAA      TGCGACAGATTGTC TAATC GTCGATATGTCGCA      GGGCCGCCCCGGCGC  71 99
LCQ52_RS04375 NONE
LCQ52_RS04370  996018 ..  996037 - -13.6  -3.65046   GGCGTAGGGCAATAA            GCTCCCTC ATCA GAGGGAGC             TTTGTTACACCAGCC  89 30
LCQ52_RS04350  989138 ..  989152 -  -6.4  -5.14563   CCTGTGACGAAAAAA               CAACCC ATC GGATTG               TTCGCTGAATACGTC  90 76
LCQ52_RS04345 NONE
LCQ52_RS04340 NONE
LCQ52_RS04335  985169 ..  985195 -  -8.6  -3.05463   AGCCGTGTCATGGAA         GCCGATTAGCCG ACA CGGCTGCTCAGC         TTGAGTATGCCGGCA  60 4
LCQ52_RS04330  983220 ..  983235 -  -4.6  -2.57564   CTATTGTGCCACAAG              CCCTAG GCGG CTTGGG               TATTACCACCAGCGG  44 42
LCQ52_RS04325 NONE
LCQ52_RS04320  981397 ..  981423 - -16.6  -3.02739   GGTAAGCGAGATAGA         GTGGCTCCCCTC TCC GAGGGGAGCCAA         GGACAGAGTTACTTT 100 34
LCQ52_RS04215  958449 ..  958482 - -19.7  -3.02511   GTTAGTTCGCTAACA     CCAAAGGGCTCGGGA TTCG TCCCGAGCCCTTTGC      TTATTCATAAGCCCT 100 80
        guaA  953787 ..  953814 - -17.1  -5.29846   AACGGCAAAGAAAAA        GCCTCCGTTCC AACGAG GGAACGGAGGC         TAGGAAATCGTTTTT 100 141
LCQ52_RS04195  952314 ..  952348 - -20.2  -4.06179   GTCAAAAGGCATAAA     GAGACCCCCTGAAAAC GTT GTTTCCAGAGGGTCTC     AATAGTTTTTACTCA 100 342
LCQ52_RS04190 NONE
LCQ52_RS04185  950850 ..  950892 -  -8.3  -3.78775   CCGCGTAGCAGGAAA CGTCCAGGGCCATTCCGGC ATACG GATGGAAAAGTCCTGGACG TTTCCATCTTTGCGT  71 68
LCQ52_RS04170 NONE
LCQ52_RS04165 NONE
LCQ52_RS04160  946851 ..  946875 - -18.7   -5.4505   GTCGGCAACAAAAAA          TGGGATTCCCC GAT GGGGAATCCCA          TTCGTCATAGAGAGC 100 175
LCQ52_RS04155  945184 ..  945196 -  -3.3  -4.42851   CCAACAAACGGAAAA                CAAGC CCA GCATG                GCCGAGGGGAGAGAC  64 126
LCQ52_RS04150  943203 ..  943217 -  -3.5  -2.78816   GCAGTCTTCAGCATA               GCCGT TCTTC ACGAC               TGGTTGGACAACTCA  43 55
LCQ52_RS04145  942063 ..  942082 -  -6.4   -2.8655   TTCATTTATACCATA            CTGTCGGT ATTT ACCGAAAG             GCTACGCCATGTCGC  51 82
LCQ52_RS04140  941916 ..  941947 - -14.5   -4.2142   AACACCTCAAAACAA      TAGACGGCCGCCCG GATGT CGAGCGGCCGTC-A      GCCGTTCCCCCACCT 100 26
        glmU NONE
        rsfS  939966 ..  940018 -  -7.6    -4.946   AGGAAACAGGAAAAA GGGGAGGGCTGCCTGATGCC GTCAATGATGTTT GGCAACAGGCAGCCCGACAC GCGAATATCAGCGAA  91 65
LCQ52_RS04125  939190 ..  939207 -  -7.7  -3.06696   GGTTTTTCGAATACA             CTGAACC TGTT GGCTCAG              CAGGGGAGCCGTGAC  57 45
LCQ52_RS04120  938904 ..  938927 -    -6  -3.91032   GAACCAGCGGAGAAA          CCACCATATC GCCT GATTTGATGG           CTTCGTCGTGGAGCT  63 32
LCQ52_RS04115  938744 ..  938766 - -16.3   -4.2408   CCAGAAAACGAGAAA           GGCCGGTGC ATGAA GCACCGGCC           TTGATTGTGGAGCTA 100 31
         pta  936851 ..  936895 - -13.6  -4.36914   TTGCTTGCTACAAAA TAAGCATTACGGTGGCTCCCG CTGG CGGGAGCCACCGGGA-GCTAA GCCGGGCTCACTGCG 100 33
LCQ52_RS04105  935463 ..  935494 - -23.2  -3.34088   ATGACCATATACGAA      TGGGGGCTGATTCC AATC GGAATCAGCCCCCA       TAGTGTTGCAACTAG 100 70
LCQ52_RS04060  926216 ..  926260 - -37.5  -3.56568   CAAGGACCGTGCAAA CGATGTGGCCCCCGACTTCCT GCG AGGAAGTCGGGGGCCACATCG TTTGCACGGTGGACT 100 57
LCQ52_RS04055  925909 ..  925933 -  -8.6  -4.26938   CGGATAAAAGAAGAA          GCCCAGAATC GTTGA GATTCCAGGC          TTTTTTGTTTGTCGG  81 36
LCQ52_RS04050  924572 ..  924591 -  -7.1  -3.92373   CAGGTCATGCACAAA            GGCCCGT ACGACG ACGAGCC             CGCAACCGTGACGAT  65 358
LCQ52_RS04000  914333 ..  914386 - -15.6  -3.57651   GCGCATATGAGAGAA CCGCACCTCCGATCATCGAATCTGAA TTTC TTCAG-TCCAACAATCGG-GGTGCGG TTCAAAGTGGATGGG 100 119
LCQ52_RS03995 NONE
LCQ52_RS03990  912763 ..  912797 -  -5.6  -3.31144   TGCTGACGGCGACAA     GATCGTCATCCTGAGC TCT GCTCAGGGCGATCACC     AGCCGGGCCGCACTG  52 185
LCQ52_RS03955  903304 ..  903350 - -24.7  -3.99678   ATGGTGATAACCAAA GAGAAGGGTTGTGCGGCCATC TCGAC AATGGTCGCACAACCCTTCTC ATGCAAGGCGTCTAT 100 83
LCQ52_RS03950 NONE
LCQ52_RS03945  901398 ..  901426 -   -11  -4.47158   AGAAGATATAACAAA        GCCCCCGCTA TGAATTCGC CAGCGGGGGC        AAGAAAAAATGGATG  93 44
        glgB NONE
LCQ52_RS03925 NONE
LCQ52_RS03920 NONE
LCQ52_RS03915  895293 ..  895332 -  -7.9  -3.14344   GAGCTCCTCCACCAA GGCACGCTCCGTGCAGCAG GTCT CTTCGGCAC--AGCGTGCC  CGTCGTATCACCGGT  57 145
LCQ52_RS03900  893430 ..  893476 - -17.4  -2.87132   TTCGGCGGCGATATA GCTGCGGGCCGTGCCACT ACCTTATTACA AGTGACACGGCCCGCAGT GTTGTCACAGGCCCC  93 30
LCQ52_RS03880  886571 ..  886581 -  -3.2  -2.52464   GCGTGGGGGAACGCA                 TGCC GAA AGCA                 CAAGCCGAATCAAGG  40 162
LCQ52_RS03875  884670 ..  884682 -  -9.1  -3.21695   CCAGTACCAAGGTAA                CCACG AAC CGTGG                TGATTTTCAAGAGGT  65 65
LCQ52_RS03870  884272 ..  884304 - -15.8  -3.60971   ATGCGAAGCCCGAAA     TGAGGAAACCCTCCC GAGT GGGAGGGTTTCCT-A      GTATGACGAAGCGAT 100 51
LCQ52_RS03855  880325 ..  880372 -  -8.5  -3.72695   AGCTGCGTGAGGAAA TCGCGCACAAGATCGCCGT-GGC GCGT GCCGAGGGCGA-CTTGTCCGAGA ACGGCGGCTACCAGG  69 418
LCQ52_RS03780 NONE
        thrC  857146 ..  857174 - -16.2  -5.86976   TCAGAAAACAAAAAA        CCGATACATGCT GGTAA AGCATGTATCGG        TTGGGAATTGTCAGT 100 60
LCQ52_RS03750  853857 ..  853882 - -17.7  -4.41494   GACCGCGAATGAAAA         GAGACCGACAG GAAT CTGTCGGTCTC          TTTCCGTTATCGGTG 100 46
LCQ52_RS03710  845592 ..  845605 -  -4.5  -3.05384   TGGGCGCCGATTGAA               TGGCC GATC AGCCA                ACGATAATGTTTTCC  47 19
LCQ52_RS03705 NONE
LCQ52_RS03700  843673 ..  843687 -  -2.8  -3.55444   GGGGGAGCGGCCAAA               GTCG TAGCGCT CGAC               GTTGGGCACGGCCAG  51 412
LCQ52_RS03560  814470 ..  814495 - -13.4  -2.78197   CTTGATACATATAAG         TATGGCTCCC ACGCTA GGGAGCCATA          TGCGGCTATCGCCGC  79 124
LCQ52_RS03555 NONE
LCQ52_RS03550  812029 ..  812059 - -14.8  -3.27259   GAGACATATGACGAA      GCCCCGGAA-CCG ATTGAA CGGATTCCGGGGC       TTCTGTGCGATTTGG  95 55
        glnA  810219 ..  810248 - -18.1  -3.60296   TATGTCCAGCCTAAA       GAACCTCGTGAAA CGAA TTTCACGAGGTTC        TTTCTAGTTACGCTG 100 110
LCQ52_RS03530  808236 ..  808255 -  -5.6  -3.02263   ACATCCCCGCCAACA            CGGTC-GCC TAT GGCAGCCCG            TGCAAGGTAATTCGC  49 128
LCQ52_RS03495 NONE
LCQ52_RS03490  797653 ..  797664 -  -5.8  -3.43546   CGATGAAAATCAATA                TCCC TTAT GGGA                 GTAGCATTTTCTGCC  56 235
LCQ52_RS03470 NONE
LCQ52_RS03465  793294 ..  793306 -  -3.3  -4.50976   GGTCAGACGAGAAAA                CCGCA GGC CGCAG                CAACGACCGGCACAC  64 0
LCQ52_RS03460  792252 ..  792273 -  -9.3  -3.72576   CTTCCCTGCACGAAA           TCGCCCACG CGGT CGCGGGCGG            CGACGCGTTCGGCGC  71 473
LCQ52_RS03415  782892 ..  782921 - -15.9  -5.28176   TTCAGGGAGAAAAAA       CAAAACCCTTCCG CGAA CGGAAGGGTTTTA        CTGGGGTGGCCAACG 100 27
LCQ52_RS03410  781684 ..  781703 - -13.6   -5.1675   GGATCTACGAAAAAA            CCTCCCTC TGAT GAGGGAGG             TGGCATCGCGAAGCG 100 70
        purT  778612 ..  778655 -  -2.6  -2.68545   GGGCTACAACAACAC TCAGCATGACGCTACGATGCG GCCGG CGCATCATA-CGTC--GCTGC ATCGAACGGCCATAC  38 300
LCQ52_RS03395  777751 ..  777776 - -13.3  -3.93578   TGAAATTAAAGACAA         TTGGCTCCCCT CGAG AGGGGAGCCAG          ATAATGCATTACTCG 100 34
LCQ52_RS03390  773928 ..  773953 - -14.1   -5.5112   GGCATGAACAAAAAA         GGGAAGGAACC CGAG AGTTCCTTCCC          TGTGTGCCGTATCAG 100 60
LCQ52_RS03385 NONE
LCQ52_RS03380 NONE
LCQ52_RS03375  770336 ..  770358 -  -5.4  -2.52516   CTTGCCACCATCAAC           GCGCCCACAC TCA GCCTGGCCGC           CGCGACCTTCCTCTA  43 220
LCQ52_RS03360  767233 ..  767285 - -18.6  -5.32699   GCAAACAGCAAAAAA CGCCGAAACCGCCATCG-CTCAGGC CGAA GCCCAAGGCGATACCGATTTCGGCG CTTGACAATCGCTCT 100 64
LCQ52_RS03345 NONE
LCQ52_RS03340 NONE
LCQ52_RS03335 NONE
LCQ52_RS03330 NONE
LCQ52_RS03325 NONE
LCQ52_RS03320  758954 ..  758981 - -18.5  -3.67864   CAACGCAATTTGAAA        GGCTCCGACGG TATTAT CCGTCGGAGCC         TTTCGTCGTATGAAT 100 66
        purF NONE
        purM NONE
        purD  754581 ..  754628 - -16.4   -4.9725   ACCGGGACAGAAAAA TCTGGCCCGGTAGCCACGTCAA TCGA TTGACATGTCTGCCAGGCCAAA AATATGCAGCAGATG 100 52
LCQ52_RS03285  748750 ..  748789 - -25.4  -3.09208   AAAGCAGTGAGCGAA  TAACAAATGGGATCGGCT TCAA AGCCGATCCCATTTGTTA   TTCCGCTGCTATTCC 100 23
LCQ52_RS03260  743141 ..  743157 -  -2.2  -4.15044   GGCCCGGCCAATAAA              GCCG TTAAAATCC CGGC              CCTAGACGCCATCAA  59 37
LCQ52_RS03235  737754 ..  737773 -  -9.2  -2.66452   ATCGCCATAACCAAT            GCCATCGG CGCG CCGCTGGC             CAGCTGGGCCGACGT  56 308
LCQ52_RS03225  734671 ..  734686 - -10.4  -3.54489   CTAACGGCAAAGGAA              TCGGCC TAAT GGCCGA               TGTCGATCAGCGCGA  74 32
LCQ52_RS03220  734138 ..  734152 -    -7  -4.31433   TACCCGCACAAGAAA               GGCCGG TAT CTGGCC               GTCTACTCCGCCGTC  73 125
LCQ52_RS11075  732522 ..  732571 - -33.9  -3.49777   CGGCATATATCATAA TGGCCGGTGTGCTGCGGATTCTT GGTA AGGAATCCGCAGCACACCGGCCA TTCATGTATGCGGCA 100 70
LCQ52_RS03165  719644 ..  719672 - -15.4  -4.64766   CTCATATCGCAAAAA        CCGTACGCTGAA AGTGA CTCAGCGTACGG        TTTTCACGAAAGCAG 100 69
LCQ52_RS03155  717959 ..  718017 - -25.5  -3.42354   CAGGTGAATGGAGAA GACAT-GGCGATGCCTGTCGGCCGATGG AGCC CCATCGGCCGACAGGCATCGAGGAAGTC ACCGTGGCCGGCGGA 100 24
LCQ52_RS03135  712565 ..  712588 - -13.8  -5.28176   GGTACCTACAAAAAA          TCCCCGGCCC ACAA GGGTCGGGGA           TTTTCCGTTATCGAT 100 54
LCQ52_RS03095  703216 ..  703237 -  -5.1  -4.37092   ATTTTCTGGATAAAA           CCACGATTA CCAA TGACCGTGG            CATTGAAATCCCGTA  68 419
LCQ52_RS03075  697036 ..  697072 - -18.9  -2.78891   ATCCGAAGTGAATGA    CAAGGCCCGTCAATC GTATGGT GATTGACGGGCCCTG    GTCGTATTGGACTTG 100 74
LCQ52_RS03050  690296 ..  690317 -  -3.7  -2.77899   GTTGCCTATGAATCA           CTGGCAGGTG GAT CAC-TGGCAG           GTACCAGTGGATGCC  43 56
LCQ52_RS03045  689556 ..  689598 -  -7.7  -3.28924   GATGCTGTTCCAGAA CCGGCAGGCCGTCAAG-ATC TATG AATGCCTGGCACCCTGCCGG CCGATCAGCGGCCCG  58 523
LCQ52_RS02920  653527 ..  653539 -  -7.7  -3.12999   TGATGCGATACGCAA                TGCCA GGG TGGCA                TGCCCGGCAGTGGCG  57 47
LCQ52_RS02915 NONE
LCQ52_RS02910 NONE
LCQ52_RS02905 NONE
LCQ52_RS02900 NONE
LCQ52_RS02895 NONE
LCQ52_RS02890 NONE
LCQ52_RS02885  640052 ..  640084 - -22.9  -3.68222   TGTTAATCGCAATAA      GATGGCCCGGAACTA TAT CAGTTCCGGGCCATC      CGTATATTTGCCATT 100 90
LCQ52_RS02860  629404 ..  629417 -  -3.8  -4.11484   GTCAATCCGTGAAAA               TCCG CGATTC CGGA                CACACTTTTTGACCC  60 210
LCQ52_RS02855  627979 ..  628028 - -29.7  -3.35813   GGGTACCTCAATCAA GAAACCCCGAGTACAAGCGTTGA TATT TCAACGCCTATACTCGGGGTTTC GTCCTTTAACAGCCC 100 97
LCQ52_RS02790  611094 ..  611108 -  -4.2  -3.21099   GGGTCTTATCACCAA               GCCG AAGCAGG CGGC               CAAGATTTTGGCCCG  47 344
LCQ52_RS02730 NONE
        trxA  596145 ..  596171 -  -7.9   -5.5112   TGGATGAATAAAAAA         CCGTGGTGGGT GTTCG ACCTGCCACGG         ATGGCATATGTAGTA 100 107
LCQ52_RS02720  594972 ..  595011 - -15.8  -2.93715   ATAAGGCGCAGAAAT  GC-CGATGCCGGTCCCCGA TGA TTGGGAACCGGCATCATGC  GCATGAGTTCGCTCG  87 112
LCQ52_RS02705  590900 ..  590931 - -18.1  -4.44797   TCATCAATAGTAAAA      GGGGCTGCCGCAT TGCAGT ATGCAGCAGCCCC       CCTATAGCGTGCAAT 100 66
        istB NONE
LCQ52_RS11065  579280 ..  579291 -  -4.4   -3.6215   GGAAGGCAGCGGAAA                CAGT GACC ACTG                 TGATTCGGTGATATC  55 414
LCQ52_RS02600  567256 ..  567286 - -21.3  -4.61868   GAGGGAGAGACAAAA       GAAGGGCGTCAGC AAGAA GCTGACGCCCTTC       TCAACATTTCAACAT 100 54
LCQ52_RS02580  563542 ..  563592 - -24.4  -2.62515   AATCCTGCGATAGCA CAACATAATAAGAAGCCCCGGTGT TGG AAACCGGGGTTTCTTATTATGTTG AGAATGGTTGGATCT 100 45
LCQ52_RS02570  560421 ..  560440 -  -5.6  -4.63932   CACCTCCCAAGAAAA            GGACGCCA TGCT CGCCGTCC             TCCACACCTGCCCGG  76 70
LCQ52_RS02525  547207 ..  547225 -    -3  -3.05066   AATAACGCGGTAACA             TGGCAACG TAG CGATGCAA             TAACGCGGTAACATG  43 74
LCQ52_RS02515  540139 ..  540192 -   -17   -4.0162   CCTGGACATGAGAAA CCGCACCTCCGATCATCGAATCTGGA TTAC TCCAG-TCCAACAATCGG-GGTGCGG TTCAAAAGGCCCTTT 100 68
LCQ52_RS02490  534067 ..  534094 -   -17  -4.58395   GCTACCGCTGAAAAA        GGGCTGTTCCGG GAAA CCGGAGCAGCCC         CTTTTGTTGTTATCG 100 35
LCQ52_RS02445  523295 ..  523334 - -15.7  -4.26188   GGGAGATATGCAAAA  CCCTAGGCCGGACAGCC ATTACA GACCGACCAGCCTAGGG   CATCCGAGCCACTTG 100 30
LCQ52_RS02440  523124 ..  523163 - -19.4  -4.39166   GCGCATATACGAAAA  GCCTCCCGGAAGCGTTGG CAAT CCAATGCTTCCAAGAGGC   TCAAGCCGGTGCGCG 100 35
LCQ52_RS02435  521882 ..  521901 -  -7.8  -3.29461   CAATCTGGCGCACAA            GCTGCTGC GCCG GTAGCAGC             TGCGGTCGGGGGACG  59 103
LCQ52_RS02415  517595 ..  517623 -   -16   -3.8377   AAGGGCGATACGAAA        GAAGGCCGGCGC TTAGT GCGTCGGCCTTC        TTGATGAACAAGAGC 100 36
LCQ52_RS02395 NONE
LCQ52_RS02385  510243 ..  510257 -  -2.8  -3.26471   CTATGGCGACATCAA               GCGT GCCATCG ACGC               CGGTGAAGACTGGCC  46 186
LCQ52_RS02375  508666 ..  508710 -  -9.4  -3.56836   AAATGACGCGCTAAA GGTG-GTA-CTTGGCTCCCCTC AGC GAGGGGAGCCAAAATGGTCACC GAGCGGAAATCTCGT  68 21
        coaD NONE
LCQ52_RS02360 NONE
LCQ52_RS02355 NONE
        rpmF  505647 ..  505670 - -12.4  -3.06492   GCACTTATGCGAAGA          CCCCGCCACC CGTC GATGGCAGGG           CCTTCATTCAAGCCG  76 53
         rnc NONE
LCQ52_RS02340 NONE
        ilvN  502054 ..  502080 -   -13   -5.1675   GCACGCATGAAAAAA         GGCGGATATGCA TCA TGCGCATCCGCC         TTTTGAGCTTGGACT 100 63
LCQ52_RS02330 NONE
LCQ52_RS02325  501227 ..  501249 - -14.8  -3.33261   CCGTAACGTTCACAA           GGCCTCGGCA GTT TGCCGGGGCC           TCCCGCTATGCAAAC  95 31
        cysS  496192 ..  496232 - -12.7  -3.06796   GCTGACCTCATCGAA  TGCAAGCGCTCGCTG GAAAAGGAGCT CAGCAAGCGCCTGCA  CATCGTGGACGTGGA  71 75
         ffh  493361 ..  493389 - -23.3  -3.61983   TGAACCGAGATATAA        CTTGGCTCCCCTC TGC GAGGGGAGCCAAG        TTGTGAGATCAGCGG 100 34
LCQ52_RS02295  492131 ..  492142 -  -7.2  -2.72344   TCTGACGGCGAACCA                CCCG GCTG CGGG                 CGGGGGTCTTCCAGA  55 95
        rpsP NONE
LCQ52_RS02255 NONE
        rimM  484164 ..  484176 -  -6.9  -4.64676   GCAGCCGCAACAAAA                GCGCC ATC GGCAC                GCTCGTCGAGCGCAC  78 477
        trmD  458613 ..  458630 -  -3.4  -5.00616   GTGCTGGTCAAAAAA             GCCGAGC AAGTG GCT-GGC             GGCTTCGGCGAACCA  78 325
LCQ52_RS02125  453435 ..  453459 - -14.3  -4.81551   GAGCCAGAGCAAAAA          TAGCTCCCCTC GCT GAGGGGAGCTG          GCCGCGAAGCGGACT 100 63
LCQ52_RS02120  452013 ..  452031 -  -5.2  -2.87132   CGCCCTCGGCACAGA             GTTGCCGA GGG CCGGCAAA             TCACTCCCGCGTCGG  49 26
LCQ52_RS02095  449835 ..  449873 -  -2.3  -4.07568   TCGGCTTGTCGAAAA   TTGTCGGGTAGCAGG GTTGCGATG CCAGCCAGCCGACCA   CCCTCCGGCGCTACG  56 108
LCQ52_RS02090 NONE
LCQ52_RS02085  447355 ..  447375 -  -3.9  -3.85698   GCGCCTTGTGAGAAA            CCTCACG CGGGGTT CGTGCGG            CGGAAACAATCCAGA  56 56
LCQ52_RS02080  445829 ..  445855 - -16.6  -3.85817   ACGGGGTGGCAGAAA         GCGGAATCGGCC TAC GGTCGATTCCGC         TACTCCTGGCGTTCG 100 25
LCQ52_RS02075  444799 ..  444827 -  -3.2  -3.21099   GCTGCTTATCACCAA        GCGCAAGA GCTGGGAGTTCTA TCTTGCGC        CAGAGGAGTTGCCTG  44 175
LCQ52_RS02065  442136 ..  442173 -  -9.1  -3.62046   CCAGCGCTGGAACAA   GGGCGAACAGCT-CAAGG CCA CCGTGCAGCTGCCCGCCA   GCGAGCTGCCGGCCG  68 338
LCQ52_RS02015 NONE
LCQ52_RS02010  431123 ..  431136 -  -2.3  -2.52896   CCATCCCCGAACCCA               CCGAC CCGC GTCTG                ACCCGCGCCCGTCGT  37 246
LCQ52_RS01990  426775 ..  426810 - -27.8  -2.87211   AGGCTGTTCTAGATA    TAGCAGGGGCTCCCTC ATCA GAGGGAGCCCCTGCTA     TATCTTTTAGTACGC 100 32
LCQ52_RS01980  424423 ..  424435 -  -9.1  -3.21099   CTTCGGCAGGATGAA                GACCG AGG CGGTC                TACCCCGAGAAGTGG  61 256
LCQ52_RS01925  414289 ..  414314 - -16.9  -4.13995   GGCGGATAAACGAAA         GGCCGCCACGA ATAA TCGTGACGGCC          TCCGCCCGCAGTAGC 100 36
LCQ52_RS01920  413404 ..  413421 -  -2.6  -2.65751   GCATCAATACAACAT             CATGCG GCGAGG CGCGTG              GCTTCCACTGCGGCG  38 7
LCQ52_RS01915 NONE
LCQ52_RS01910  412757 ..  412795 - -19.7  -4.38927   GCCTGACATAACAAA  GCCCCCGAACC-TACCGC ACTC ACGGTATGGCTCGGGGGC   TTTTCGTCGTTTAAG 100 43
LCQ52_RS01680  380373 ..  380392 - -10.7  -5.65927   CAGGCAAACAAAAAA            GCCACCC GCAACG GGGTGGC             TCAGGAAAAGATGTG 100 48
LCQ52_RS01625  374859 ..  374886 - -11.3  -4.87037   AACAGATATTAAAAA        CCGCCG-CCCCA GATGA TGGGAACGGCGG        TCAATCAGTAGCGGG 100 93
LCQ52_RS01615  374250 ..  374273 -  -3.8  -2.66695   CTTCCTACCAAACAT          CACTACACCT CCAA AGGTTTGGTG           TAATCGGAATTACCA  42 4
LCQ52_RS01610  373927 ..  373938 -  -5.8  -3.86944   CCTATAATCACCAAA                CGCA TCAT TGCG                 CCACCTCACTTGGTT  63 52
LCQ52_RS01605 NONE
LCQ52_RS01600  373242 ..  373261 -  -7.2  -4.66833   CCCTAAGCGGAAAAA            CAAGAATC CGAA GATTCCTG             AATTTCCGAAGGGTT  83 353
LCQ52_RS01595 NONE
LCQ52_RS01585  371837 ..  371864 -  -6.9  -5.00616   TTGCGGCTTAAAAAA        CGGGCGGCTACC AGCGA GGCCGC-GCCCG        AACCGGCGGCGAAGA  86 5
LCQ52_RS01580 NONE
LCQ52_RS01575  369862 ..  369875 -  -3.7  -3.31515   AAATACCGGCCATAA               GCGGC CATA GCGGC                CATAAGCGGACACGT  49 51
LCQ52_RS01570 NONE
LCQ52_RS01565 NONE
LCQ52_RS01560 NONE
LCQ52_RS01555 NONE
LCQ52_RS01550 NONE
LCQ52_RS01545 NONE
LCQ52_RS01540 NONE
LCQ52_RS01535  365047 ..  365067 -  -8.9  -3.69482   GCAGGCAAGAGAGAA            GGCCTAGCG AGT CGTCAGGCC            ACGCGGTCAGAGCGT  70 32
LCQ52_RS01530 NONE
LCQ52_RS01525 NONE
LCQ52_RS01520 NONE
LCQ52_RS01510 NONE
LCQ52_RS01505 NONE
LCQ52_RS01500 NONE
LCQ52_RS01495 NONE
LCQ52_RS11050 NONE
LCQ52_RS11045  357913 ..  357927 -  -3.4  -3.89614   GGCAAGGGCGACAAA               CAGCGC ATA GTGCCG               TTGCCGGACGACTTG  56 317
LCQ52_RS01480  356384 ..  356401 -  -2.6  -2.65751   GCATCAATACAACAT             CATGCG GCGAGG CGCGTG              GCTTCCACTGCGGCG  38 7
LCQ52_RS01475 NONE
LCQ52_RS01470  355737 ..  355775 - -19.7  -4.38927   GCCTGACATAACAAA  GCCCCCGAACC-TACCGC ACTC ACGGTATGGCTCGGGGGC   TTTTCGTCGTTTAAG 100 43
LCQ52_RS01460  350682 ..  350709 - -18.6  -2.54801   TATGCCCAAACAGAC        GAAATCCTCCCC TTGA GGGGAGGATTTC         TAGCGGTTTACGCGC 100 98
LCQ52_RS01455  350020 ..  350035 - -11.8  -4.96657   ACAAATACAACAAAA              GGCCCC CGAA GGGGCC               TCCTGTCAACGATTC 100 50
LCQ52_RS01450  349207 ..  349230 -   -11  -5.04868   TGAAATCAAACAAAA          TAGCCCCTTC TGGT GAAGGGGCTT           ATGGCACTAAATCAG 100 37
LCQ52_RS01445  348416 ..  348435 -  -4.2   -3.1855   TTGCGGAATATGGAA            CGGTGGAC GTCC ATCAACCG             ATGATACGGCCGAGC  49 19
LCQ52_RS01440 NONE
         nth NONE
LCQ52_RS01430  345041 ..  345055 -  -7.8  -3.84712   GAACTGTACAGTAAA               CAGCCC AGT AGGCTG               TTCGCAGGCGAGGTA  68 105
        valS  342087 ..  342125 - -24.9  -5.09426   CCGAACGTCAAAAAA   CAAAAGAGGGGAACCTC AATAG GAGGTTCCCCTCTTTTG   TTGTTGTGCGCAACG 100 156
LCQ52_RS01350  321408 ..  321436 -   -16  -3.74345   ATTCATATATGCAAA        TGGCCTCCGCTC GTTTT GGGCGGAGGCCA        TTGTCGTTGAATCAG 100 54
LCQ52_RS01305  315597 ..  315630 - -23.9  -3.35015   TTAACCAGTGTACAA     GCACCCCGCCGCAGC GAAC GCCACGGCGGGGTGC      TTATTTCGTAAGAGT 100 57
LCQ52_RS01300  314470 ..  314496 -    -8  -5.22312   AGCTATACGAAAAAA         CACCGCTTGA TCAATAG CCAAGCGGCG         TTTTTTTCGTAAGGA 100 56
LCQ52_RS01265  309643 ..  309663 -  -3.9  -4.10744   TCAGCGAAAGAACAA            CGATAATGC TCA GCAATAACG            CGGTAGTGGTGTACT  63 307
LCQ52_RS01255  308992 ..  309018 -  -8.7   -3.1855   CGCGTCAACATGGAA        CTGG-TCGGCTC TGAA GAGCCGTTCCAG         CTGCTTTCGGATATG  58 192
LCQ52_RS01225  301437 ..  301468 - -10.8  -2.78679   CGCCGCTATGTAAAC      GGAATCGCCCAGCGC TTC GCGC-GGCCGATACC      TACCTCATCCATGCG  66 25
LCQ52_RS01200 NONE
LCQ52_RS01195  294164 ..  294178 -  -2.8  -4.30576   GGCCGAGTAGCAAAA               CCTC GACTGGG GAGG               TAATAGGGATGCCCT  62 79
         zwf NONE
LCQ52_RS01175  289568 ..  289615 - -25.8  -3.26473   GGAAACGATGAGCAA CGGCGTTGGCATG-GCTCGGCCA CAA TTGCCGAACTCATGCCAACGCCG CTGTGGCAACGGGTT 100 50
LCQ52_RS01170  288534 ..  288569 - -21.4  -2.91383   AGGCGTAGCCATAGA    CGAATTAAGCCCCCTC ATCA GAGGGGGCTTAATTCA     CTCACAACTCGGTGA 100 27
LCQ52_RS01155 NONE
LCQ52_RS01150  280005 ..  280032 -  -3.2  -2.60496   TTCTCTTCGAAATAT        GCTCCCGTACGC TCCC GCTGGCGAGAGC         TGGCTGGCAAAGCCA  40 94
LCQ52_RS01145  279247 ..  279258 -  -3.6  -3.54741   GACGACTTCGCCAAA                GCCA TTAA CGGC                 GTGGTGGACGGCAAA  51 154
LCQ52_RS01105  270513 ..  270537 -  -7.9  -5.38054   TTCGAGAAAGAAAAA          GGGCTTTGG TGCGAAG CCAAAACCC          TGATGGCGGAGGATA 100 29
LCQ52_RS01100 NONE
LCQ52_RS01095  267989 ..  268006 -  -4.1  -3.84451   GCTTCTAAATGCAAA             CGCAGAT GTTC ATCTGGG              TAGTGTTCCGAAACG  56 65
LCQ52_RS01025  253261 ..  253274 -  -3.1  -2.94695   CCATCATGAAGCACA               TCAGA ACGA CCTGA                ACTACAGCAGTGAGT  42 90
LCQ52_RS01020  252105 ..  252120 -  -6.2  -2.78463   AGGTTCGCGACCACA              TAAGGA GCAC TCCTTA               TTATCTCGGCCGGTG  50 80
LCQ52_RS00990  241000 ..  241036 - -22.6   -3.3095   ATACAGTGCCGAGAA    TGATGAAGCCCTACTC GCGTT GAGTAGGGCTTCATCA    TTGGTTGCGGGGAAC 100 69
LCQ52_RS00970  236517 ..  236536 -   -15  -3.35679   CGTTTTGACGTATAA            GCCCCCTC GTCA GAGGGGGC             TTAGCTTTTGTCTCA  95 38
LCQ52_RS00960  235351 ..  235373 - -17.8  -3.55444   CCCTGAGCCGTTAAA           CGGAAAGCCC ACC GGGCTTTCCG           TAGGCGATGCGAGCA 100 68
LCQ52_RS00905  220228 ..  220262 -   -26  -4.82667   CTAGCAGAGCAAAAA     CAAGGCTCCCTCTGAT TGC ATCAGAGGGAGCCTTG     TTGTCTGTGTTTTAC 100 44
         asd  214074 ..  214091 - -12.7  -3.83409   GTATATACGACGAAA             GCCCTCC TTGC GGAGGGC              TTTCTCAGTTTCGGA  90 52
LCQ52_RS00850  208780 ..  208792 -  -3.3  -3.53012   CCCGGTCTGCTCAAA                CGCTT AGA AGGCG                ATGAGGTCAAGGAAG  49 219
LCQ52_RS00835  204498 ..  204520 - -16.4  -2.74144   GGCTGAGCCGTAAAG           CAAACAGCCC AGT GGGCTGTTTG           TAGGCGAGGGTTCGA  90 159
LCQ52_RS00730  181443 ..  181458 -  -4.6  -3.57561   CGCCAAGTCCGGAAA              GGCAAC GTCC GATGCC               ATCCGCCGCGCCGCA  55 160
LCQ52_RS00720  180475 ..  180491 -  -2.9  -3.40071   AACTCATATTGACAA              CGATTGC AAT ACATTCG              GTGAGTTGGACGAGG  47 133
        malQ  177999 ..  178016 -  -4.9  -3.61715   TACCGTCGCGAACAA             TCATTGT CATG ACAACGA              TAACATGCCCATAAC  55 110
LCQ52_RS00710  176900 ..  176913 -  -2.3  -4.20084   ATTACGCATGCAAAA               GTCGA TTTA TCGGC                GTTTTGCGGTGGTAA  56 46
LCQ52_RS00705  174907 ..  174939 - -22.8  -4.35116   CAGTGCATACCAAAA      GGCCGCCGCTCCGA TTCAT TCGGAACGGCGGCC      TTTCGCTTATTCCAA 100 46
LCQ52_RS00675 NONE
LCQ52_RS00670  164559 ..  164603 - -16.4  -2.69151   CGGCGCCAGATACGA CTCGAGGGACGCACCCCGGA GGAGT TCCGGAGCATGTCCCTCGCG GTCTAGGGCTGTATC  89 74
LCQ52_RS00655  162104 ..  162128 -  -6.3  -3.53091   AGTCGCGGCCCGAAA          CCACCAGCACG ATG CGTACCCGCGG          CTATGTGTTGGCCCA  57 520
        fbaA  150075 ..  150085 -  -5.4  -3.99678   ATCGGTAGAATGAAA                 GCTT CCC AAGC                 TTTAGAGGCGGGTTC  63 123
LCQ52_RS00590  145540 ..  145570 -  -4.7  -3.85864   CCAGCAGCAGAAGAA      CGCTACTACCACTG CCCC CACGGGTAGT-GCG       GTGGCTGCCGTTGCT  60 496
LCQ52_RS00575 NONE
        tatC NONE
LCQ52_RS00565  138141 ..  138157 -  -2.9  -2.57013   TTGGAACGTAACGGA              TGTCGCG TGC CGCAAGA              CGTAGCGGTTATCGG  39 236
         tgt  130693 ..  130706 -  -4.5  -2.57721   CAATCGACTAACTTA               CACCC GGCT GGGTA                ATCATGCAATCTTCG  44 166
LCQ52_RS00540  130546 ..  130579 -  -8.2  -4.53163   GCACATATGAGAAAA    CCCCGG--AGCGTTGG TATT CCAACGTTTTCCGGGG     TTTCTCCCTGCGTGC  87 38
LCQ52_RS00520 NONE
LCQ52_RS00515  124419 ..  124458 -  -8.7  -2.83715   GTGAGGATGAGCACA CGGT-CGC-CGGCG-AGCAT CGC ATGATGCGCCGCGCGGACCG TGGCATCGCCGCCAC  60 218
LCQ52_RS00490  118186 ..  118231 - -11.8  -3.02745   CCCATGGATAAATTA CCGCCCGATGGGCAGCAGCAA CTTAC TCGCCGCGGCGC-TCGGACGG GCGGCGAATCGGGTC  76 2
LCQ52_RS00470  113981 ..  114001 -  -3.9  -3.55761   GACCCAGCCGTCAAA            GCCGAAGCC AAC GACTTCATC            GCCGCTACCAAAGAT  53 454
LCQ52_RS00450  108750 ..  108765 -    -4   -3.5594   AATTCAGGGCGGAAA              TGGGTGC GGC GCACC-A              CCCGAGGTGCTTTAC  51 82
LCQ52_RS00445 NONE
LCQ52_RS00440 NONE
LCQ52_RS00435 NONE
LCQ52_RS00430 NONE
LCQ52_RS00425 NONE
LCQ52_RS00420 NONE
        pknB   99520 ..   99545 - -11.8  -3.88498   TCTTTATACAGCAAA         GGGGAGGGGC GCAGAA GCCCTTCCCC          TTTGTGTTGCGTGTA  86 110
        crgA   96005 ..   96047 - -20.8     -2.55   GAACAGGCTAAGGCA CGAAAAAGGCCGACCTCC GCATACG GGAGGTCGGCCTTTCTCA TAAGAATTAAGGACA 100 94
LCQ52_RS00390   94104 ..   94149 -  -6.9  -5.75342   TGGCTGTAAAAAAAA CGATTGATGCCGGGTATTGC GGAACAT GCAGTGCCCGGCATCAGT-G TATGTGCGGAAAGCG 100 511
LCQ52_RS00375   91632 ..   91688 - -37.2  -3.09749   GACGCCCAAGACATA CAAGAAAGCCCCGCAATGATATATCG ATCGA CGATATATCATTGCGGGGCTTTCTTG TGTTGAAAGAAGAGA 100 48
LCQ52_RS00365   88197 ..   88226 - -16.6  -3.61398   GTCTTCTCGTAATAA       TCCCCTTGTGCT TGGTTG AGCACAAGGGGA        TTTGTGGTTATGGCT 100 80
        trpS   86502 ..   86537 - -10.5   -5.0916   GCCGCAATACAAAAA   CGCCGTGTCAGTTGCCC AGTT GGGG--CTGACACGGCG    TCTTGCTACGAGCGG 100 49
LCQ52_RS00345   83433 ..   83449 - -10.1  -2.81888   CTTGAAACGGAAGTA              GACCTCC GGC GGAGGCC              AAATCAGCCCCTTGA  64 100
LCQ52_RS00330   76405 ..   76421 -  -2.9  -2.70932   GTCGGCCGGGAATCA              GCCCG TGTTCTG CAGGC              CCGCGGCGACGCCGG  41 6
LCQ52_RS00325   75336 ..   75352 -  -2.1  -3.96387   ACGAATCGAATTAAA              CGGTTCT ATC AGTCCCG              GTTCAAGGGAAGTGC  54 295
LCQ52_RS00315   73955 ..   73996 - -13.2  -3.07622   ATAGAGGCTAGCTAA TGAATCGGTGAGGAAG ATTCCAGAGA CTGCCTCACCGATTCA  TTAACTGCATACAGA  84 70
LCQ52_RS00300   68352 ..   68391 -  -8.6  -4.08064   AATTCCGGCTGAAAA  CCTATGCC-ATCGACGAGA ATA TCACGTCCATCGGCATTGG  CTTTGAGGACTGATA  77 120
LCQ52_RS00295 NONE
LCQ52_RS00290   67331 ..   67348 -  -2.6  -2.55999   GCATGTGAGATTAAT             GGCGGA TTCCAC TCCGTC              CTTTCTGATTGCCGA  38 64
LCQ52_RS00285 NONE
LCQ52_RS00280   65178 ..   65214 - -14.4  -4.56961   AAGATGCACACAAAA    CGGGGAAGCTCTGCTC GATGT GAGCGGGGCTTCCCCA    TATGCGCTGGTGTGT 100 44
LCQ52_RS00265   60761 ..   60782 -    -8  -3.28712   TGCCTGGTCGGATAA           CCCAGATG CTCCAC CACCTGGG            CCGTCGTCATCGGCG  62 366
LCQ52_RS00250   58319 ..   58331 -  -4.8  -3.55444   TGCGTAGGTGGGAAA                TGCG ACTTG CGCA                GACGGGGTTAGATAT  52 61
LCQ52_RS00195   47133 ..   47174 - -13.1  -2.57931   GGTAGCTCGCATAAT GCATTATGTGTGGGCAGATG TGT CGTCTGCCCACACATT-CGC TGTTGTGCTTTCGAT  75 73
LCQ52_RS00180 NONE
LCQ52_RS00175   41849 ..   41866 -  -2.6  -2.55999   GCATGTGAGATTAAT             GGCGGA TTCCAC TCCGTC              CTTTCTGATTGCCGA  38 64
LCQ52_RS00170   39696 ..   39732 - -14.4  -4.56961   AAGATGCACACAAAA    CGGGGAAGCTCTGCTC GATGT GAGCGGGGCTTCCCCA    TATGCGCTGGTGTGT 100 369
LCQ52_RS00150   34727 ..   34745 -    -6  -4.59853   CGAATTCGGCAAAAA             GAGCATCC CCC AAATGCTC             GAACTGGTCGGCGCG  75 160
LCQ52_RS00135   30953 ..   30965 -  -3.3  -3.58522   AGGAGGATGTTCAAA                CCAAG TGA CATGG                CTTCAACTCTAGGGG  49 283
LCQ52_RS00130 NONE
LCQ52_RS00125   29001 ..   29027 - -22.4  -3.83998   TCACGTGAGACGAAA         GTGGCTCCCCTC TTT GAGGGGAGCCAC         GGAATACTGCTTTTA 100 42
LCQ52_RS00120   27422 ..   27447 -  -9.8  -3.09015   TTCAGACCGACCTAA         CTGATCAGAG CGGGCC CTCTGACCAG          TCCGAACCATCTGAC  67 74
LCQ52_RS00100   22466 ..   22485 -  -6.3   -2.8805   ATCACCCCGTACAGA            CGGGGCG GCTCCT CGCCGCG             CGTACGAACGCAGTT  51 50
LCQ52_RS00095   21791 ..   21801 -  -3.2  -3.29161   CAAGTGATTACAATA                 CCAT TGA ACGG                 CGGTATGTCAATAAC  45 7
LCQ52_RS00090   21649 ..   21667 -  -5.9  -5.60993   CCCGTGAGAAAAAAA             GAGCGGC TCGCG GCCGCTT             CATTTTTCCTGTGGG 100 36
LCQ52_RS00085   21523 ..   21549 - -15.3  -5.30348   ATGCAAGAACAAAAA         CCCTTGGAATC GGACT GATTCCAAGGG         TTTTGTTGTGTCTGT 100 38
LCQ52_RS00060 NONE
        gdhA   15399 ..   15438 - -19.5  -2.98823   CTCGTTGTACATATA  GCAATGCCCTTGCCTCC TCACGG GGAAGCAAGGGCATTAC   GCTACTGCTTAGTAC 100 88
LCQ52_RS00040 NONE
LCQ52_RS11010    3500 ..    3541 -  -3.8  -4.07687   ACGGTCTGGGCAAAA CCAATCTGGTGGA-AGC CGTCGAAGT GCTGTCCACCGGATCGA GCCATCGCACGTCCA  61 304
LCQ52_RS11150    1529 ..    1563 -   -13  -4.84527   CTGAGAGACGAAAAA     CGGCACTTTTTGGA CTGACTT TCCGAAAAGTGCCG     TTTTTGGTTGCTCAG 100 423
