locus-tag class description DND34_RS00005 PF00308 Bacterial dnaA protein DND34_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DND34_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DND34_RS00010 PF02767 DNA polymerase III beta subunit, central domain DND34_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DND34_RS00015 PF02463 RecF/RecN/SMC N terminal domain DND34_RS00020 PF05258 Dna[CI] antecedent, DciA DND34_RS00025 PF01751 Toprim domain DND34_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DND34_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus DND34_RS00025 PF00204 DNA gyrase B DND34_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DND34_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DND34_RS00035 PF12089 Transmembrane domain of unknown function (DUF3566) DND34_RS00050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DND34_RS00050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DND34_RS00055 PF01037 Lrp/AsnC ligand binding domain DND34_RS00100 PF00155 Aminotransferase class I and II DND34_RS00105 PF00202 Aminotransferase class-III DND34_RS00125 PF00210 Ferritin-like domain DND34_RS00130 PF03471 Transporter associated domain DND34_RS00130 PF00571 CBS domain DND34_RS00130 PF01595 Cyclin M transmembrane N-terminal domain DND34_RS00135 PF00484 Carbonic anhydrase DND34_RS00140 PF10417 C-terminal domain of 1-Cys peroxiredoxin DND34_RS00140 PF00578 AhpC/TSA family DND34_RS00145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DND34_RS00155 PF00356 Bacterial regulatory proteins, lacI family DND34_RS00160 PF00311 Phosphoenolpyruvate carboxylase DND34_RS00170 PF00474 Sodium:solute symporter family DND34_RS00185 PF00579 tRNA synthetases class I (W and Y) DND34_RS00200 PF00343 Carbohydrate phosphorylase DND34_RS00210 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DND34_RS00210 PF01694 Rhomboid family DND34_RS00215 PF06781 Cell division protein CrgA DND34_RS00230 PF00117 Glutamine amidotransferase class-I DND34_RS00235 PF03793 PASTA domain DND34_RS00235 PF00069 Protein kinase domain DND34_RS00245 PF00905 Penicillin binding protein transpeptidase domain DND34_RS00250 PF01098 Cell cycle protein DND34_RS00270 PF00326 Prolyl oligopeptidase family DND34_RS00270 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DND34_RS00300 PF05816 Toxic anion resistance protein (TelA) DND34_RS00305 PF00011 Hsp20/alpha crystallin family DND34_RS00325 PF09924 Uncharacterised conserved protein (DUF2156) DND34_RS00330 PF01625 Peptide methionine sulfoxide reductase DND34_RS00330 PF01641 SelR domain DND34_RS00330 PF08534 Redoxin DND34_RS00345 PF00293 NUDIX domain DND34_RS00350 PF01906 Putative heavy-metal-binding DND34_RS00370 PF01702 Queuine tRNA-ribosyltransferase DND34_RS00375 PF13180 PDZ domain DND34_RS00375 PF17820 PDZ domain DND34_RS00390 PF07992 Pyridine nucleotide-disulphide oxidoreductase DND34_RS00395 PF01435 Peptidase family M48 DND34_RS00405 PF01116 Fructose-bisphosphate aldolase class-II DND34_RS00410 PF00709 Adenylosuccinate synthetase DND34_RS00415 PF00654 Voltage gated chloride channel DND34_RS00420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DND34_RS00425 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DND34_RS00430 PF13407 Periplasmic binding protein domain DND34_RS00430 PF00356 Bacterial regulatory proteins, lacI family DND34_RS00435 PF02705 K+ potassium transporter DND34_RS00440 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DND34_RS00445 PF00356 Bacterial regulatory proteins, lacI family DND34_RS00460 PF09244 Domain of unknown function (DUF1964) DND34_RS00460 PF00128 Alpha amylase, catalytic domain DND34_RS00470 PF00356 Bacterial regulatory proteins, lacI family DND34_RS00470 PF13407 Periplasmic binding protein domain DND34_RS00475 PF00083 Sugar (and other) transporter DND34_RS00475 PF07690 Major Facilitator Superfamily DND34_RS00480 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DND34_RS00480 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DND34_RS00485 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DND34_RS00485 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DND34_RS00490 PF16657 Maltogenic Amylase, C-terminal domain DND34_RS00490 PF00128 Alpha amylase, catalytic domain DND34_RS00495 PF00356 Bacterial regulatory proteins, lacI family DND34_RS00500 PF02446 4-alpha-glucanotransferase DND34_RS00510 PF02806 Alpha amylase, C-terminal all-beta domain DND34_RS00510 PF00128 Alpha amylase, catalytic domain DND34_RS00515 PF00356 Bacterial regulatory proteins, lacI family DND34_RS00520 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS00535 PF00012 Hsp70 protein DND34_RS00540 PF01025 GrpE DND34_RS00545 PF01556 DnaJ C terminal domain DND34_RS00545 PF00226 DnaJ domain DND34_RS00550 PF13411 MerR HTH family regulatory protein DND34_RS00555 PF00860 Permease family DND34_RS00560 PF04443 Acyl-protein synthetase, LuxE DND34_RS00575 PF13419 Haloacid dehalogenase-like hydrolase DND34_RS00580 PF09335 SNARE associated Golgi protein DND34_RS00590 PF00437 Type II/IV secretion system protein DND34_RS00630 PF12169 DNA polymerase III subunits gamma and tau domain III DND34_RS00635 PF02132 RecR protein DND34_RS00635 PF13662 Toprim domain DND34_RS00655 PF13840 ACT domain DND34_RS00655 PF01842 ACT domain DND34_RS00655 PF00696 Amino acid kinase family DND34_RS00660 PF00696 Amino acid kinase family DND34_RS00660 PF01842 ACT domain DND34_RS00660 PF13840 ACT domain DND34_RS00665 PF02774 Semialdehyde dehydrogenase, dimerisation domain DND34_RS00665 PF01118 Semialdehyde dehydrogenase, NAD binding domain DND34_RS00690 PF00682 HMGL-like DND34_RS00690 PF08502 LeuA allosteric (dimerisation) domain DND34_RS00695 PF00912 Transglycosylase DND34_RS00695 PF00905 Penicillin binding protein transpeptidase domain DND34_RS00710 PF13368 Topoisomerase C-terminal repeat DND34_RS00710 PF01751 Toprim domain DND34_RS00710 PF01131 DNA topoisomerase DND34_RS00715 PF02223 Thymidylate kinase DND34_RS00720 PF12169 DNA polymerase III subunits gamma and tau domain III DND34_RS00730 PF03577 Peptidase family C69 DND34_RS00735 PF01268 Formate--tetrahydrofolate ligase DND34_RS00765 PF01263 Aldose 1-epimerase DND34_RS00770 PF05656 Protein of unknown function (DUF805) DND34_RS00775 PF12008 Type I restriction and modification enzyme - subunit R C terminal DND34_RS00775 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DND34_RS00775 PF18766 SWI2/SNF2 ATPase DND34_RS00785 PF01420 Type I restriction modification DNA specificity domain DND34_RS00795 PF12161 HsdM N-terminal domain DND34_RS00795 PF02384 N-6 DNA Methylase DND34_RS00800 PF00749 tRNA synthetases class I (E and Q), catalytic domain DND34_RS00820 PF04650 YSIRK type signal peptide DND34_RS00820 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal DND34_RS00820 PF17451 Glycosyl hydrolase 101 beta sandwich domain DND34_RS00820 PF17974 Galactose-binding domain-like DND34_RS00820 PF18080 Galactose mutarotase-like fold domain DND34_RS00820 PF00754 F5/8 type C domain DND34_RS00820 PF12905 Endo-alpha-N-acetylgalactosaminidase DND34_RS00825 PF06912 Protein of unknown function (DUF1275) DND34_RS00840 PF03239 Iron permease FTR1 family DND34_RS00845 PF10634 Fe2+ transport protein DND34_RS00860 PF12704 MacB-like periplasmic core domain DND34_RS00860 PF02687 FtsX-like permease family DND34_RS00865 PF00005 ABC transporter DND34_RS00875 PF00440 Bacterial regulatory proteins, tetR family DND34_RS00885 PF01061 ABC-2 type transporter DND34_RS00895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DND34_RS00895 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DND34_RS00900 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DND34_RS00910 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DND34_RS00910 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DND34_RS00920 PF03577 Peptidase family C69 DND34_RS00925 PF00535 Glycosyl transferase family 2 DND34_RS00930 PF00440 Bacterial regulatory proteins, tetR family DND34_RS00935 PF02881 SRP54-type protein, helical bundle domain DND34_RS00935 PF00448 SRP54-type protein, GTPase domain DND34_RS00940 PF00909 Ammonium Transporter Family DND34_RS00945 PF00543 Nitrogen regulatory protein P-II DND34_RS00950 PF01966 HD domain DND34_RS00950 PF01909 Nucleotidyltransferase domain DND34_RS00950 PF08335 GlnD PII-uridylyltransferase DND34_RS00960 PF03796 DnaB-like helicase C terminal domain DND34_RS00960 PF00772 DnaB-like helicase N terminal domain DND34_RS00965 PF08245 Mur ligase middle domain DND34_RS00965 PF08353 Domain of unknown function (DUF1727) DND34_RS00970 PF07685 CobB/CobQ-like glutamine amidotransferase domain DND34_RS00980 PF03109 ABC1 family DND34_RS00985 PF01168 Alanine racemase, N-terminal domain DND34_RS00990 PF03575 Peptidase family S51 DND34_RS01000 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DND34_RS01000 PF14572 Phosphoribosyl synthetase-associated domain DND34_RS01010 PF01250 Ribosomal protein S6 DND34_RS01015 PF00436 Single-strand binding protein family DND34_RS01020 PF01084 Ribosomal protein S18 DND34_RS01025 PF03948 Ribosomal protein L9, C-terminal domain DND34_RS01025 PF01281 Ribosomal protein L9, N-terminal domain DND34_RS01035 PF00381 PTS HPr component phosphorylation site DND34_RS01040 PF02896 PEP-utilising enzyme, TIM barrel domain DND34_RS01040 PF00391 PEP-utilising enzyme, mobile domain DND34_RS01040 PF05524 PEP-utilising enzyme, N-terminal DND34_RS01045 PF00230 Major intrinsic protein DND34_RS01050 PF04945 YHS domain DND34_RS01055 PF02583 Metal-sensitive transcriptional repressor DND34_RS01060 PF02646 RmuC family DND34_RS01070 PF12105 SpoU, rRNA methylase, C-terminal DND34_RS01070 PF00588 SpoU rRNA Methylase family DND34_RS01075 PF02686 Glu-tRNAGln amidotransferase C subunit DND34_RS01080 PF01425 Amidase DND34_RS01085 PF02637 GatB domain DND34_RS01085 PF02934 GatB/GatE catalytic domain DND34_RS01095 PF10611 Protein of unknown function (DUF2469) DND34_RS01105 PF01593 Flavin containing amine oxidoreductase DND34_RS01110 PF07497 Rho termination factor, RNA-binding domain DND34_RS01110 PF07498 Rho termination factor, N-terminal domain DND34_RS01110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DND34_RS01115 PF01817 Chorismate mutase type II DND34_RS01115 PF02153 Prephenate dehydrogenase DND34_RS01135 PF00633 Helix-hairpin-helix motif DND34_RS01135 PF00730 HhH-GPD superfamily base excision DNA repair protein DND34_RS01135 PF10576 Iron-sulfur binding domain of endonuclease III DND34_RS01140 PF00486 Transcriptional regulatory protein, C terminal DND34_RS01150 PF02659 Putative manganese efflux pump DND34_RS01155 PF00719 Inorganic pyrophosphatase DND34_RS01160 PF11896 Domain of unknown function (DUF3416) DND34_RS01160 PF00128 Alpha amylase, catalytic domain DND34_RS01185 PF04204 Homoserine O-succinyltransferase DND34_RS01190 PF00119 ATP synthase A chain DND34_RS01195 PF00137 ATP synthase subunit C DND34_RS01200 PF00430 ATP synthase B/B' CF(0) DND34_RS01205 PF00213 ATP synthase delta (OSCP) subunit DND34_RS01210 PF02874 ATP synthase alpha/beta family, beta-barrel domain DND34_RS01210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DND34_RS01210 PF00306 ATP synthase alpha/beta chain, C terminal domain DND34_RS01215 PF00231 ATP synthase DND34_RS01220 PF02874 ATP synthase alpha/beta family, beta-barrel domain DND34_RS01220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DND34_RS01225 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DND34_RS01230 PF01939 Endonuclease NucS DND34_RS01235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DND34_RS01235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DND34_RS01265 PF01042 Endoribonuclease L-PSP DND34_RS01275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DND34_RS01275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DND34_RS01280 PF07478 D-ala D-ala ligase C-terminus DND34_RS01280 PF01820 D-ala D-ala ligase N-terminus DND34_RS01300 PF08402 TOBE domain DND34_RS01300 PF00005 ABC transporter DND34_RS01315 PF00206 Lyase DND34_RS01315 PF10415 Fumarase C C-terminus DND34_RS01330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DND34_RS01330 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DND34_RS01350 PF01381 Helix-turn-helix DND34_RS01355 PF01467 Cytidylyltransferase-like DND34_RS01355 PF00294 pfkB family carbohydrate kinase DND34_RS01360 PF00830 Ribosomal L28 family DND34_RS01365 PF00270 DEAD/DEAH box helicase DND34_RS01365 PF00271 Helicase conserved C-terminal domain DND34_RS01365 PF17191 RecG wedge domain DND34_RS01375 PF01746 tRNA (Guanine-1)-methyltransferase DND34_RS01390 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DND34_RS01395 PF01470 Pyroglutamyl peptidase DND34_RS01405 PF03051 Peptidase C1-like family DND34_RS01410 PF00793 DAHP synthetase I family DND34_RS01415 PF00793 DAHP synthetase I family DND34_RS01420 PF01048 Phosphorylase superfamily DND34_RS01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DND34_RS01425 PF00512 His Kinase A (phospho-acceptor) domain DND34_RS01430 PF00072 Response regulator receiver domain DND34_RS01430 PF00486 Transcriptional regulatory protein, C terminal DND34_RS01435 PF12849 PBP superfamily domain DND34_RS01440 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS01445 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS01450 PF00005 ABC transporter DND34_RS01455 PF04011 LemA family DND34_RS01470 PF01156 Inosine-uridine preferring nucleoside hydrolase DND34_RS01475 PF13936 Helix-turn-helix domain DND34_RS01475 PF00665 Integrase core domain DND34_RS01480 PF01782 RimM N-terminal domain DND34_RS01490 PF00886 Ribosomal protein S16 DND34_RS01500 PF02881 SRP54-type protein, helical bundle domain DND34_RS01500 PF02978 Signal peptide binding domain DND34_RS01500 PF00448 SRP54-type protein, GTPase domain DND34_RS01510 PF09190 DALR domain DND34_RS01510 PF01406 tRNA synthetases class I (C) catalytic domain DND34_RS01515 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DND34_RS01515 PF00117 Glutamine amidotransferase class-I DND34_RS01520 PF16326 ABC transporter C-terminal domain DND34_RS01520 PF00005 ABC transporter DND34_RS01520 PF12848 ABC transporter DND34_RS01525 PF01850 PIN domain DND34_RS01535 PF10369 Small subunit of acetolactate synthase DND34_RS01540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DND34_RS01540 PF00205 Thiamine pyrophosphate enzyme, central domain DND34_RS01540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DND34_RS01545 PF00035 Double-stranded RNA binding motif DND34_RS01545 PF14622 Ribonuclease-III-like DND34_RS01550 PF01783 Ribosomal L32p protein family DND34_RS01555 PF02620 Large ribosomal RNA subunit accumulation protein YceD DND34_RS01565 PF01467 Cytidylyltransferase-like DND34_RS01575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DND34_RS01580 PF00795 Carbon-nitrogen hydrolase DND34_RS01610 PF00248 Aldo/keto reductase family DND34_RS01625 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DND34_RS01625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DND34_RS01630 PF01138 3' exoribonuclease family, domain 1 DND34_RS01630 PF03725 3' exoribonuclease family, domain 2 DND34_RS01635 PF01725 Ham1 family DND34_RS01645 PF02388 FemAB family DND34_RS01650 PF02388 FemAB family DND34_RS01675 PF00342 Phosphoglucose isomerase DND34_RS01680 PF01245 Ribosomal protein L19 DND34_RS01685 PF10502 Signal peptidase, peptidase S26 DND34_RS01690 PF01351 Ribonuclease HII DND34_RS01695 PF00356 Bacterial regulatory proteins, lacI family DND34_RS01700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DND34_RS01700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DND34_RS01705 PF00596 Class II Aldolase and Adducin N-terminal domain DND34_RS01710 PF02610 L-arabinose isomerase DND34_RS01710 PF11762 L-arabinose isomerase C-terminal domain DND34_RS01715 PF07722 Peptidase C26 DND34_RS01725 PF02687 FtsX-like permease family DND34_RS01725 PF12704 MacB-like periplasmic core domain DND34_RS01735 PF00005 ABC transporter DND34_RS01740 PF00501 AMP-binding enzyme DND34_RS01750 PF00005 ABC transporter DND34_RS01750 PF00664 ABC transporter transmembrane region DND34_RS01755 PF00083 Sugar (and other) transporter DND34_RS01760 PF02449 Beta-galactosidase DND34_RS01760 PF08532 Beta-galactosidase trimerisation domain DND34_RS01765 PF00356 Bacterial regulatory proteins, lacI family DND34_RS01770 PF00665 Integrase core domain DND34_RS01770 PF13936 Helix-turn-helix domain DND34_RS01780 PF00248 Aldo/keto reductase family DND34_RS01795 PF01566 Natural resistance-associated macrophage protein DND34_RS01795 PF03358 NADPH-dependent FMN reductase DND34_RS01800 PF07690 Major Facilitator Superfamily DND34_RS01810 PF02397 Bacterial sugar transferase DND34_RS01815 PF01451 Low molecular weight phosphotyrosine protein phosphatase DND34_RS01820 PF00535 Glycosyl transferase family 2 DND34_RS01830 PF13439 Glycosyltransferase Family 4 DND34_RS01830 PF00534 Glycosyl transferases group 1 DND34_RS01840 PF00535 Glycosyl transferase family 2 DND34_RS01840 PF01501 Glycosyl transferase family 8 DND34_RS01865 PF13276 HTH-like domain DND34_RS01865 PF01527 Transposase DND34_RS01865 PF00665 Integrase core domain DND34_RS01865 PF13333 Integrase core domain DND34_RS01890 PF13614 AAA domain DND34_RS01905 PF00085 Thioredoxin DND34_RS01925 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DND34_RS01925 PF00293 NUDIX domain DND34_RS01925 PF09297 NADH pyrophosphatase zinc ribbon domain DND34_RS01930 PF01597 Glycine cleavage H-protein DND34_RS01940 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DND34_RS01940 PF00326 Prolyl oligopeptidase family DND34_RS01945 PF00180 Isocitrate/isopropylmalate dehydrogenase DND34_RS01950 PF03099 Biotin/lipoate A/B protein ligase family DND34_RS01950 PF10437 Bacterial lipoate protein ligase C-terminus DND34_RS01955 PF00027 Cyclic nucleotide-binding domain DND34_RS01955 PF13545 Crp-like helix-turn-helix domain DND34_RS01960 PF00912 Transglycosylase DND34_RS01960 PF00905 Penicillin binding protein transpeptidase domain DND34_RS01965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DND34_RS01970 PF01180 Dihydroorotate dehydrogenase DND34_RS01975 PF08220 DeoR-like helix-turn-helix domain DND34_RS01975 PF00455 DeoR C terminal sensor domain DND34_RS01980 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DND34_RS01980 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DND34_RS01985 PF10509 Galactokinase galactose-binding signature DND34_RS01985 PF08544 GHMP kinases C terminal DND34_RS01985 PF00288 GHMP kinases N terminal domain DND34_RS01995 PF05167 Uncharacterised ACR (DUF711) DND34_RS02000 PF00588 SpoU rRNA Methylase family DND34_RS02005 PF00730 HhH-GPD superfamily base excision DNA repair protein DND34_RS02005 PF00633 Helix-hairpin-helix motif DND34_RS02015 PF04561 RNA polymerase Rpb2, domain 2 DND34_RS02015 PF04560 RNA polymerase Rpb2, domain 7 DND34_RS02015 PF00562 RNA polymerase Rpb2, domain 6 DND34_RS02015 PF04565 RNA polymerase Rpb2, domain 3 DND34_RS02015 PF10385 RNA polymerase beta subunit external 1 domain DND34_RS02015 PF04563 RNA polymerase beta subunit DND34_RS02020 PF04998 RNA polymerase Rpb1, domain 5 DND34_RS02020 PF05000 RNA polymerase Rpb1, domain 4 DND34_RS02020 PF04997 RNA polymerase Rpb1, domain 1 DND34_RS02020 PF04983 RNA polymerase Rpb1, domain 3 DND34_RS02020 PF00623 RNA polymerase Rpb1, domain 2 DND34_RS02050 PF07726 ATPase family associated with various cellular activities (AAA) DND34_RS02050 PF17863 AAA lid domain DND34_RS02060 PF03793 PASTA domain DND34_RS02060 PF00069 Protein kinase domain DND34_RS02070 PF00580 UvrD/REP helicase N-terminal domain DND34_RS02070 PF13361 UvrD-like helicase C-terminal domain DND34_RS02080 PF01113 Dihydrodipicolinate reductase, N-terminus DND34_RS02080 PF05173 Dihydrodipicolinate reductase, C-terminus DND34_RS02085 PF00701 Dihydrodipicolinate synthetase family DND34_RS02090 PF12706 Beta-lactamase superfamily domain DND34_RS02090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DND34_RS02090 PF17770 Ribonuclease J C-terminal domain DND34_RS02095 PF01433 Peptidase family M1 domain DND34_RS02095 PF11838 ERAP1-like C-terminal domain DND34_RS02100 PF01925 Sulfite exporter TauE/SafE DND34_RS02115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DND34_RS02115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DND34_RS02115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DND34_RS02115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DND34_RS02120 PF01327 Polypeptide deformylase DND34_RS02130 PF00472 RF-1 domain DND34_RS02130 PF03462 PCRF domain DND34_RS02135 PF00005 ABC transporter DND34_RS02140 PF02687 FtsX-like permease family DND34_RS02140 PF18075 FtsX extracellular domain DND34_RS02145 PF05257 CHAP domain DND34_RS02145 PF01476 LysM domain DND34_RS02150 PF01668 SmpB protein DND34_RS02160 PF00497 Bacterial extracellular solute-binding proteins, family 3 DND34_RS02165 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS02170 PF00005 ABC transporter DND34_RS02175 PF01380 SIS domain DND34_RS02180 PF00849 RNA pseudouridylate synthase DND34_RS02190 PF00356 Bacterial regulatory proteins, lacI family DND34_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS02200 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS02205 PF08532 Beta-galactosidase trimerisation domain DND34_RS02205 PF08533 Beta-galactosidase C-terminal domain DND34_RS02205 PF02449 Beta-galactosidase DND34_RS02210 PF00356 Bacterial regulatory proteins, lacI family DND34_RS02215 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DND34_RS02220 PF01547 Bacterial extracellular solute-binding protein DND34_RS02225 PF01547 Bacterial extracellular solute-binding protein DND34_RS02235 PF03309 Type III pantothenate kinase DND34_RS02240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DND34_RS02245 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS02250 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS02255 PF00005 ABC transporter DND34_RS02255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DND34_RS02260 PF00005 ABC transporter DND34_RS02260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DND34_RS02265 PF00571 CBS domain DND34_RS02265 PF00291 Pyridoxal-phosphate dependent enzyme DND34_RS02270 PF01053 Cys/Met metabolism PLP-dependent enzyme DND34_RS02280 PF09382 RQC domain DND34_RS02280 PF16124 RecQ zinc-binding DND34_RS02280 PF00570 HRDC domain DND34_RS02280 PF00271 Helicase conserved C-terminal domain DND34_RS02280 PF00270 DEAD/DEAH box helicase DND34_RS02285 PF02664 S-Ribosylhomocysteinase (LuxS) DND34_RS02305 PF13520 Amino acid permease DND34_RS02310 PF00842 Alanine racemase, C-terminal domain DND34_RS02310 PF01168 Alanine racemase, N-terminal domain DND34_RS02315 PF01966 HD domain DND34_RS02315 PF13286 Phosphohydrolase-associated domain DND34_RS02320 PF01807 CHC2 zinc finger DND34_RS02320 PF10410 DnaB-helicase binding domain of primase DND34_RS02320 PF08278 DNA primase DnaG DnaB-binding DND34_RS02320 PF13662 Toprim domain DND34_RS02320 PF08275 DNA primase catalytic core, N-terminal domain DND34_RS02330 PF13443 Cro/C1-type HTH DNA-binding domain DND34_RS02335 PF01680 SOR/SNZ family DND34_RS02340 PF01174 SNO glutamine amidotransferase family DND34_RS02345 PF00392 Bacterial regulatory proteins, gntR family DND34_RS02345 PF00155 Aminotransferase class I and II DND34_RS02350 PF01112 Asparaginase DND34_RS02355 PF03600 Citrate transporter DND34_RS02365 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DND34_RS02365 PF02018 Carbohydrate binding domain DND34_RS02370 PF01380 SIS domain DND34_RS02375 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DND34_RS02375 PF17191 RecG wedge domain DND34_RS02375 PF00270 DEAD/DEAH box helicase DND34_RS02390 PF12704 MacB-like periplasmic core domain DND34_RS02390 PF02687 FtsX-like permease family DND34_RS02390 PF00005 ABC transporter DND34_RS02400 PF12704 MacB-like periplasmic core domain DND34_RS02400 PF00005 ABC transporter DND34_RS02400 PF02687 FtsX-like permease family DND34_RS02405 PF02779 Transketolase, pyrimidine binding domain DND34_RS02405 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DND34_RS02405 PF02780 Transketolase, C-terminal domain DND34_RS02415 PF00731 AIR carboxylase DND34_RS02420 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DND34_RS02420 PF02222 ATP-grasp domain DND34_RS02425 PF01475 Ferric uptake regulator family DND34_RS02445 PF00171 Aldehyde dehydrogenase family DND34_RS02450 PF02844 Phosphoribosylglycinamide synthetase, N domain DND34_RS02450 PF02843 Phosphoribosylglycinamide synthetase, C domain DND34_RS02450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DND34_RS02455 PF00586 AIR synthase related protein, N-terminal domain DND34_RS02455 PF02769 AIR synthase related protein, C-terminal domain DND34_RS02460 PF00156 Phosphoribosyl transferase domain DND34_RS02460 PF13537 Glutamine amidotransferase domain DND34_RS02465 PF00005 ABC transporter DND34_RS02470 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS02475 PF00497 Bacterial extracellular solute-binding proteins, family 3 DND34_RS02485 PF01979 Amidohydrolase family DND34_RS02490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DND34_RS02490 PF05221 S-adenosyl-L-homocysteine hydrolase DND34_RS02495 PF00817 impB/mucB/samB family DND34_RS02495 PF11799 impB/mucB/samB family C-terminal domain DND34_RS02495 PF11798 IMS family HHH motif DND34_RS02505 PF00248 Aldo/keto reductase family DND34_RS02510 PF03466 LysR substrate binding domain DND34_RS02510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DND34_RS02530 PF07859 alpha/beta hydrolase fold DND34_RS02535 PF00586 AIR synthase related protein, N-terminal domain DND34_RS02535 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DND34_RS02535 PF02769 AIR synthase related protein, C-terminal domain DND34_RS02540 PF01259 SAICAR synthetase DND34_RS02550 PF02222 ATP-grasp domain DND34_RS02580 PF01758 Sodium Bile acid symporter family DND34_RS02585 PF00164 Ribosomal protein S12/S23 DND34_RS02590 PF00177 Ribosomal protein S7p/S5e DND34_RS02595 PF00679 Elongation factor G C-terminus DND34_RS02595 PF03764 Elongation factor G, domain IV DND34_RS02595 PF14492 Elongation Factor G, domain II DND34_RS02595 PF00009 Elongation factor Tu GTP binding domain DND34_RS02595 PF03144 Elongation factor Tu domain 2 DND34_RS02600 PF03143 Elongation factor Tu C-terminal domain DND34_RS02600 PF03144 Elongation factor Tu domain 2 DND34_RS02600 PF00009 Elongation factor Tu GTP binding domain DND34_RS02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DND34_RS02610 PF03466 LysR substrate binding domain DND34_RS02615 PF03601 Conserved hypothetical protein 698 DND34_RS02625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DND34_RS02630 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DND34_RS02635 PF08240 Alcohol dehydrogenase GroES-like domain DND34_RS02635 PF00107 Zinc-binding dehydrogenase DND34_RS02675 PF17755 UvrA DNA-binding domain DND34_RS02675 PF00005 ABC transporter DND34_RS02675 PF17760 UvrA interaction domain DND34_RS02700 PF00132 Bacterial transferase hexapeptide (six repeats) DND34_RS02700 PF12464 Maltose acetyltransferase DND34_RS02715 PF03951 Glutamine synthetase, beta-Grasp domain DND34_RS02715 PF00120 Glutamine synthetase, catalytic domain DND34_RS02725 PF07992 Pyridine nucleotide-disulphide oxidoreductase DND34_RS02725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DND34_RS02735 PF01546 Peptidase family M20/M25/M40 DND34_RS02735 PF07687 Peptidase dimerisation domain DND34_RS02740 PF09819 ABC-type cobalt transport system, permease component DND34_RS02745 PF00005 ABC transporter DND34_RS02755 PF00588 SpoU rRNA Methylase family DND34_RS02755 PF08032 RNA 2'-O ribose methyltransferase substrate binding DND34_RS02760 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DND34_RS02760 PF01409 tRNA synthetases class II core domain (F) DND34_RS02765 PF03484 tRNA synthetase B5 domain DND34_RS02765 PF03483 B3/4 domain DND34_RS02765 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DND34_RS02765 PF01588 Putative tRNA binding domain DND34_RS02765 PF03147 Ferredoxin-fold anticodon binding domain DND34_RS02775 PF01118 Semialdehyde dehydrogenase, NAD binding domain DND34_RS02775 PF02774 Semialdehyde dehydrogenase, dimerisation domain DND34_RS02780 PF01960 ArgJ family DND34_RS02785 PF00696 Amino acid kinase family DND34_RS02790 PF00202 Aminotransferase class-III DND34_RS02795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DND34_RS02795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DND34_RS02800 PF01316 Arginine repressor, DNA binding domain DND34_RS02800 PF02863 Arginine repressor, C-terminal domain DND34_RS02805 PF00764 Arginosuccinate synthase DND34_RS02810 PF14698 Argininosuccinate lyase C-terminal DND34_RS02810 PF00206 Lyase DND34_RS02820 PF05690 Thiazole biosynthesis protein ThiG DND34_RS02825 PF00899 ThiF family DND34_RS02830 PF00581 Rhodanese-like domain DND34_RS02845 PF01479 S4 domain DND34_RS02845 PF00579 tRNA synthetases class I (W and Y) DND34_RS02865 PF01479 S4 domain DND34_RS02865 PF01728 FtsJ-like methyltransferase DND34_RS02880 PF02386 Cation transport protein DND34_RS02885 PF01513 ATP-NAD kinase DND34_RS02890 PF02463 RecF/RecN/SMC N terminal domain DND34_RS02895 PF13419 Haloacid dehalogenase-like hydrolase DND34_RS02900 PF00392 Bacterial regulatory proteins, gntR family DND34_RS02905 PF00005 ABC transporter DND34_RS02920 PF00690 Cation transporter/ATPase, N-terminus DND34_RS02920 PF00689 Cation transporting ATPase, C-terminus DND34_RS02925 PF00291 Pyridoxal-phosphate dependent enzyme DND34_RS02925 PF14821 Threonine synthase N terminus DND34_RS02930 PF00464 Serine hydroxymethyltransferase DND34_RS02935 PF00171 Aldehyde dehydrogenase family DND34_RS02945 PF01467 Cytidylyltransferase-like DND34_RS02955 PF03699 Uncharacterised protein family (UPF0182) DND34_RS02960 PF00027 Cyclic nucleotide-binding domain DND34_RS02960 PF13302 Acetyltransferase (GNAT) domain DND34_RS02965 PF01195 Peptidyl-tRNA hydrolase DND34_RS02970 PF00271 Helicase conserved C-terminal domain DND34_RS02970 PF17757 UvrB interaction domain DND34_RS02970 PF03461 TRCF domain DND34_RS02970 PF02559 CarD-like/TRCF domain DND34_RS02970 PF00270 DEAD/DEAH box helicase DND34_RS02975 PF00248 Aldo/keto reductase family DND34_RS02980 PF00113 Enolase, C-terminal TIM barrel domain DND34_RS02980 PF03952 Enolase, N-terminal domain DND34_RS02995 PF02541 Ppx/GppA phosphatase family DND34_RS03010 PF03313 Serine dehydratase alpha chain DND34_RS03010 PF03315 Serine dehydratase beta chain DND34_RS03015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DND34_RS03020 PF03449 Transcription elongation factor, N-terminal DND34_RS03020 PF01272 Transcription elongation factor, GreA/GreB, C-term DND34_RS03025 PF03006 Haemolysin-III related DND34_RS03035 PF12282 Signal transduction histidine kinase DND34_RS03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DND34_RS03035 PF07568 Histidine kinase DND34_RS03040 PF02467 Transcription factor WhiB DND34_RS03045 PF12538 DNA transporter DND34_RS03045 PF01580 FtsK/SpoIIIE family DND34_RS03050 PF03816 Cell envelope-related transcriptional attenuator domain DND34_RS03060 PF02467 Transcription factor WhiB DND34_RS03085 PF00156 Phosphoribosyl transferase domain DND34_RS03090 PF00717 Peptidase S24-like DND34_RS03095 PF00512 His Kinase A (phospho-acceptor) domain DND34_RS03095 PF00672 HAMP domain DND34_RS03095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DND34_RS03100 PF00072 Response regulator receiver domain DND34_RS03100 PF00486 Transcriptional regulatory protein, C terminal DND34_RS03105 PF02806 Alpha amylase, C-terminal all-beta domain DND34_RS03105 PF00128 Alpha amylase, catalytic domain DND34_RS03105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DND34_RS03110 PF02559 CarD-like/TRCF domain DND34_RS03115 PF02542 YgbB family DND34_RS03120 PF00950 ABC 3 transport family DND34_RS03125 PF00005 ABC transporter DND34_RS03130 PF01297 Zinc-uptake complex component A periplasmic DND34_RS03135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DND34_RS03135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DND34_RS03140 PF00575 S1 RNA binding domain DND34_RS03145 PF01121 Dephospho-CoA kinase DND34_RS03150 PF17757 UvrB interaction domain DND34_RS03150 PF00271 Helicase conserved C-terminal domain DND34_RS03150 PF04851 Type III restriction enzyme, res subunit DND34_RS03150 PF02151 UvrB/uvrC motif DND34_RS03150 PF12344 Ultra-violet resistance protein B DND34_RS03155 PF03741 Integral membrane protein TerC family DND34_RS03160 PF02887 Pyruvate kinase, alpha/beta domain DND34_RS03160 PF00224 Pyruvate kinase, barrel domain DND34_RS03165 PF00293 NUDIX domain DND34_RS03280 PF00270 DEAD/DEAH box helicase DND34_RS03280 PF00271 Helicase conserved C-terminal domain DND34_RS03280 PF00570 HRDC domain DND34_RS03280 PF16124 RecQ zinc-binding DND34_RS03280 PF09382 RQC domain DND34_RS03390 PF03389 MobA/MobL family DND34_RS03390 PF17841 BID domain of Bartonella effector protein (Bep) DND34_RS03390 PF01443 Viral (Superfamily 1) RNA helicase DND34_RS03460 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DND34_RS03585 PF01476 LysM domain DND34_RS03585 PF05257 CHAP domain DND34_RS03635 PF03861 ANTAR domain DND34_RS03635 PF00072 Response regulator receiver domain DND34_RS03640 PF00476 DNA polymerase family A DND34_RS03640 PF01367 5'-3' exonuclease, C-terminal SAM fold DND34_RS03640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DND34_RS03645 PF01784 NIF3 (NGG1p interacting factor 3) DND34_RS03650 PF00293 NUDIX domain DND34_RS03655 PF00128 Alpha amylase, catalytic domain DND34_RS03655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DND34_RS03680 PF00703 Glycosyl hydrolases family 2 DND34_RS03680 PF16353 Domain of unknown function(DUF4981) DND34_RS03680 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DND34_RS03680 PF02837 Glycosyl hydrolases family 2, sugar binding domain DND34_RS03680 PF02929 Beta galactosidase small chain DND34_RS03685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DND34_RS03690 PF08532 Beta-galactosidase trimerisation domain DND34_RS03690 PF02449 Beta-galactosidase DND34_RS03720 PF00871 Acetokinase family DND34_RS03725 PF01515 Phosphate acetyl/butaryl transferase DND34_RS03725 PF07085 DRTGG domain DND34_RS03740 PF00300 Histidine phosphatase superfamily (branch 1) DND34_RS03750 PF00132 Bacterial transferase hexapeptide (six repeats) DND34_RS03750 PF12804 MobA-like NTP transferase domain DND34_RS03760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DND34_RS03760 PF14572 Phosphoribosyl synthetase-associated domain DND34_RS03765 PF01757 Acyltransferase family DND34_RS03770 PF08903 Domain of unknown function (DUF1846) DND34_RS03810 PF01695 IstB-like ATP binding protein DND34_RS03830 PF00958 GMP synthase C terminal domain DND34_RS03830 PF00117 Glutamine amidotransferase class-I DND34_RS03830 PF02540 NAD synthase DND34_RS03835 PF09364 XFP N-terminal domain DND34_RS03835 PF09363 XFP C-terminal domain DND34_RS03835 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DND34_RS03845 PF03180 NLPA lipoprotein DND34_RS03855 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS03860 PF07687 Peptidase dimerisation domain DND34_RS03860 PF01546 Peptidase family M20/M25/M40 DND34_RS03865 PF02540 NAD synthase DND34_RS03865 PF00795 Carbon-nitrogen hydrolase DND34_RS03875 PF02901 Pyruvate formate lyase-like DND34_RS03875 PF01228 Glycine radical DND34_RS03880 PF04055 Radical SAM superfamily DND34_RS03895 PF05697 Bacterial trigger factor protein (TF) DND34_RS03895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DND34_RS03895 PF05698 Bacterial trigger factor protein (TF) C-terminus DND34_RS03910 PF00574 Clp protease DND34_RS03915 PF00574 Clp protease DND34_RS03920 PF07724 AAA domain (Cdc48 subfamily) DND34_RS03920 PF10431 C-terminal, D2-small domain, of ClpB protein DND34_RS03920 PF06689 ClpX C4-type zinc finger DND34_RS03935 PF06965 Na+/H+ antiporter 1 DND34_RS03940 PF03641 Possible lysine decarboxylase DND34_RS03955 PF00890 FAD binding domain DND34_RS03955 PF02910 Fumarate reductase flavoprotein C-term DND34_RS03960 PF17782 DprA winged helix domain DND34_RS03960 PF02481 DNA recombination-mediator protein A DND34_RS03965 PF13335 Magnesium chelatase, subunit ChlI C-terminal DND34_RS03965 PF01078 Magnesium chelatase, subunit ChlI DND34_RS03970 PF02021 Uncharacterised protein family UPF0102 DND34_RS03980 PF01053 Cys/Met metabolism PLP-dependent enzyme DND34_RS03985 PF00005 ABC transporter DND34_RS03990 PF02687 FtsX-like permease family DND34_RS03990 PF00005 ABC transporter DND34_RS03990 PF12704 MacB-like periplasmic core domain DND34_RS03995 PF00072 Response regulator receiver domain DND34_RS03995 PF00196 Bacterial regulatory proteins, luxR family DND34_RS04000 PF07730 Histidine kinase DND34_RS04005 PF00561 alpha/beta hydrolase fold DND34_RS04010 PF14748 Pyrroline-5-carboxylate reductase dimerisation DND34_RS04010 PF03807 NADP oxidoreductase coenzyme F420-dependent DND34_RS04015 PF01926 50S ribosome-binding GTPase DND34_RS04015 PF06071 Protein of unknown function (DUF933) DND34_RS04020 PF02661 Fic/DOC family DND34_RS04020 PF13784 Fic/DOC family N-terminal DND34_RS04060 PF00440 Bacterial regulatory proteins, tetR family DND34_RS04060 PF17932 Tetracyclin repressor-like, C-terminal domain DND34_RS04080 PF01695 IstB-like ATP binding protein DND34_RS04090 PF01695 IstB-like ATP binding protein DND34_RS04120 PF18652 Adhesin P1 N-terminal domain DND34_RS04120 PF17998 Cell surface antigen I/II C2 terminal domain DND34_RS04120 PF16364 Cell surface antigen C-terminus DND34_RS04120 PF08363 Glucan-binding protein C DND34_RS04120 PF00746 LPXTG cell wall anchor motif DND34_RS04150 PF01695 IstB-like ATP binding protein DND34_RS04200 PF01695 IstB-like ATP binding protein DND34_RS04215 PF01464 Transglycosylase SLT domain DND34_RS04215 PF01476 LysM domain DND34_RS04235 PF07690 Major Facilitator Superfamily DND34_RS04260 PF00860 Permease family DND34_RS04265 PF00270 DEAD/DEAH box helicase DND34_RS04265 PF00271 Helicase conserved C-terminal domain DND34_RS04270 PF13305 Tetracyclin repressor-like, C-terminal domain DND34_RS04270 PF00440 Bacterial regulatory proteins, tetR family DND34_RS04275 PF02903 Alpha amylase, N-terminal ig-like domain DND34_RS04275 PF00128 Alpha amylase, catalytic domain DND34_RS04275 PF16657 Maltogenic Amylase, C-terminal domain DND34_RS04280 PF02554 Carbon starvation protein CstA DND34_RS04280 PF13722 5TM C-terminal transporter carbon starvation CstA DND34_RS04290 PF01384 Phosphate transporter family DND34_RS04300 PF00196 Bacterial regulatory proteins, luxR family DND34_RS04300 PF00072 Response regulator receiver domain DND34_RS04305 PF07730 Histidine kinase DND34_RS04310 PF00005 ABC transporter DND34_RS04325 PF17191 RecG wedge domain DND34_RS04325 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DND34_RS04325 PF00270 DEAD/DEAH box helicase DND34_RS04355 PF13443 Cro/C1-type HTH DNA-binding domain DND34_RS04360 PF00860 Permease family DND34_RS04365 PF00156 Phosphoribosyl transferase domain DND34_RS04370 PF00580 UvrD/REP helicase N-terminal domain DND34_RS04370 PF13361 UvrD-like helicase C-terminal domain DND34_RS04370 PF13361 UvrD-like helicase C-terminal domain DND34_RS04370 PF00580 UvrD/REP helicase N-terminal domain DND34_RS04385 PF12704 MacB-like periplasmic core domain DND34_RS04385 PF02687 FtsX-like permease family DND34_RS04385 PF00005 ABC transporter DND34_RS04390 PF00163 Ribosomal protein S4/S9 N-terminal domain DND34_RS04390 PF01479 S4 domain DND34_RS04395 PF01757 Acyltransferase family DND34_RS04400 PF00300 Histidine phosphatase superfamily (branch 1) DND34_RS04415 PF02272 DHHA1 domain DND34_RS04415 PF01411 tRNA synthetases class II (A) DND34_RS04415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DND34_RS04420 PF03652 Holliday junction resolvase DND34_RS04435 PF01264 Chorismate synthase DND34_RS04440 PF01202 Shikimate kinase DND34_RS04440 PF01761 3-dehydroquinate synthase DND34_RS04445 PF01220 Dehydroquinase class II DND34_RS04450 PF07687 Peptidase dimerisation domain DND34_RS04450 PF01546 Peptidase family M20/M25/M40 DND34_RS04455 PF00117 Glutamine amidotransferase class-I DND34_RS04455 PF06418 CTP synthase N-terminus DND34_RS04465 PF01458 Uncharacterized protein family (UPF0051) DND34_RS04470 PF01458 Uncharacterized protein family (UPF0051) DND34_RS04475 PF00005 ABC transporter DND34_RS04480 PF00266 Aminotransferase class-V DND34_RS04490 PF01883 Iron-sulfur cluster assembly protein DND34_RS04495 PF00483 Nucleotidyl transferase DND34_RS04500 PF00588 SpoU rRNA Methylase family DND34_RS04510 PF04452 RNA methyltransferase DND34_RS04515 PF01230 HIT domain DND34_RS04520 PF02562 PhoH-like protein DND34_RS04525 PF02130 Uncharacterized protein family UPF0054 DND34_RS04530 PF01595 Cyclin M transmembrane N-terminal domain DND34_RS04530 PF00571 CBS domain DND34_RS04530 PF03471 Transporter associated domain DND34_RS04535 PF01926 50S ribosome-binding GTPase DND34_RS04535 PF07650 KH domain DND34_RS04540 PF00501 AMP-binding enzyme DND34_RS04545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DND34_RS04545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DND34_RS04550 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DND34_RS04555 PF02233 NAD(P) transhydrogenase beta subunit DND34_RS04565 PF01386 Ribosomal L25p family DND34_RS04565 PF14693 Ribosomal protein TL5, C-terminal domain DND34_RS04570 PF01063 Amino-transferase class IV DND34_RS04620 PF00665 Integrase core domain DND34_RS04620 PF13936 Helix-turn-helix domain DND34_RS05065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DND34_RS05065 PF07733 Bacterial DNA polymerase III alpha NTPase domain DND34_RS05065 PF11490 DNA polymerase III polC-type N-terminus II DND34_RS05065 PF02811 PHP domain DND34_RS05065 PF00929 Exonuclease DND34_RS05065 PF14579 Helix-hairpin-helix motif DND34_RS05085 PF03819 MazG nucleotide pyrophosphohydrolase domain DND34_RS05095 PF01649 Ribosomal protein S20 DND34_RS05100 PF06421 GTP-binding protein LepA C-terminus DND34_RS05100 PF00009 Elongation factor Tu GTP binding domain DND34_RS05100 PF00679 Elongation factor G C-terminus DND34_RS05105 PF04055 Radical SAM superfamily DND34_RS05110 PF00356 Bacterial regulatory proteins, lacI family DND34_RS05115 PF02595 Glycerate kinase family DND34_RS05120 PF01554 MatE DND34_RS05130 PF00356 Bacterial regulatory proteins, lacI family DND34_RS05145 PF01113 Dihydrodipicolinate reductase, N-terminus DND34_RS05145 PF05173 Dihydrodipicolinate reductase, C-terminus DND34_RS05155 PF01493 GXGXG motif DND34_RS05155 PF04898 Glutamate synthase central domain DND34_RS05155 PF01645 Conserved region in glutamate synthase DND34_RS05155 PF00310 Glutamine amidotransferases class-II DND34_RS05160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DND34_RS05160 PF07992 Pyridine nucleotide-disulphide oxidoreductase DND34_RS05175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DND34_RS05190 PF00534 Glycosyl transferases group 1 DND34_RS05190 PF13439 Glycosyltransferase Family 4 DND34_RS05195 PF00005 ABC transporter DND34_RS05205 PF00795 Carbon-nitrogen hydrolase DND34_RS05210 PF00578 AhpC/TSA family DND34_RS05230 PF01695 IstB-like ATP binding protein DND34_RS05260 PF00107 Zinc-binding dehydrogenase DND34_RS05260 PF08240 Alcohol dehydrogenase GroES-like domain DND34_RS05265 PF12146 Serine aminopeptidase, S33 DND34_RS05270 PF00248 Aldo/keto reductase family DND34_RS05290 PF08704 tRNA methyltransferase complex GCD14 subunit DND34_RS05295 PF00300 Histidine phosphatase superfamily (branch 1) DND34_RS05300 PF08267 Cobalamin-independent synthase, N-terminal domain DND34_RS05300 PF01717 Cobalamin-independent synthase, Catalytic domain DND34_RS05305 PF02219 Methylenetetrahydrofolate reductase DND34_RS05310 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DND34_RS05315 PF08335 GlnD PII-uridylyltransferase DND34_RS05315 PF03710 Glutamate-ammonia ligase adenylyltransferase DND34_RS05320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DND34_RS05320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DND34_RS05325 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DND34_RS05325 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DND34_RS05330 PF01979 Amidohydrolase family DND34_RS05335 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DND34_RS05340 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DND34_RS05345 PF01180 Dihydroorotate dehydrogenase DND34_RS05350 PF00156 Phosphoribosyl transferase domain DND34_RS05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DND34_RS05365 PF03466 LysR substrate binding domain DND34_RS05375 PF01256 Carbohydrate kinase DND34_RS05375 PF03853 YjeF-related protein N-terminus DND34_RS05380 PF00155 Aminotransferase class I and II DND34_RS05405 PF10502 Signal peptidase, peptidase S26 DND34_RS05415 PF00324 Amino acid permease DND34_RS05430 PF02096 60Kd inner membrane protein DND34_RS05435 PF02096 60Kd inner membrane protein DND34_RS05440 PF00293 NUDIX domain DND34_RS05445 PF00795 Carbon-nitrogen hydrolase DND34_RS05475 PF12704 MacB-like periplasmic core domain DND34_RS05475 PF02687 FtsX-like permease family DND34_RS05475 PF00005 ABC transporter DND34_RS05485 PF07730 Histidine kinase DND34_RS05490 PF00072 Response regulator receiver domain DND34_RS05490 PF00196 Bacterial regulatory proteins, luxR family DND34_RS05500 PF00005 ABC transporter DND34_RS05530 PF00005 ABC transporter DND34_RS05590 PF01261 Xylose isomerase-like TIM barrel DND34_RS05595 PF00291 Pyridoxal-phosphate dependent enzyme DND34_RS05600 PF00290 Tryptophan synthase alpha chain DND34_RS05605 PF01790 Prolipoprotein diacylglyceryl transferase DND34_RS05610 PF00834 Ribulose-phosphate 3 epimerase family DND34_RS05620 PF08029 HisG, C-terminal domain DND34_RS05620 PF01634 ATP phosphoribosyltransferase DND34_RS05625 PF01066 CDP-alcohol phosphatidyltransferase DND34_RS05630 PF05949 Bacterial protein of unknown function (DUF881) DND34_RS05635 PF06947 Protein of unknown function (DUF1290) DND34_RS05645 PF00498 FHA domain DND34_RS05650 PF13411 MerR HTH family regulatory protein DND34_RS05670 PF13397 RNA polymerase-binding protein DND34_RS05675 PF08148 DSHCT (NUC185) domain DND34_RS05675 PF00270 DEAD/DEAH box helicase DND34_RS05675 PF00271 Helicase conserved C-terminal domain DND34_RS05700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DND34_RS05700 PF01926 50S ribosome-binding GTPase DND34_RS05705 PF00849 RNA pseudouridylate synthase DND34_RS05705 PF01479 S4 domain DND34_RS05710 PF00230 Major intrinsic protein DND34_RS05715 PF02142 MGS-like domain DND34_RS05715 PF01808 AICARFT/IMPCHase bienzyme DND34_RS05725 PF02629 CoA binding domain DND34_RS05725 PF00549 CoA-ligase DND34_RS05730 PF00549 CoA-ligase DND34_RS05730 PF08442 ATP-grasp domain DND34_RS05735 PF00156 Phosphoribosyl transferase domain DND34_RS05745 PF05496 Holliday junction DNA helicase RuvB P-loop domain DND34_RS05745 PF05491 RuvB C-terminal winged helix domain DND34_RS05745 PF17864 RuvB AAA lid domain DND34_RS05750 PF01330 RuvA N terminal domain DND34_RS05750 PF07499 RuvA, C-terminal domain DND34_RS05755 PF02075 Crossover junction endodeoxyribonuclease RuvC DND34_RS05760 PF01709 Transcriptional regulator DND34_RS05765 PF01230 HIT domain DND34_RS05770 PF03129 Anticodon binding domain DND34_RS05770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DND34_RS05770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DND34_RS05805 PF02673 Bacitracin resistance protein BacA DND34_RS05815 PF00589 Phage integrase family DND34_RS05815 PF02899 Phage integrase, N-terminal SAM-like domain DND34_RS06090 PF01556 DnaJ C terminal domain DND34_RS06090 PF00226 DnaJ domain DND34_RS06090 PF00684 DnaJ central domain DND34_RS06095 PF01628 HrcA protein C terminal domain DND34_RS06100 PF02780 Transketolase, C-terminal domain DND34_RS06100 PF02779 Transketolase, pyrimidine binding domain DND34_RS06100 PF00456 Transketolase, thiamine diphosphate binding domain DND34_RS06105 PF00923 Transaldolase/Fructose-6-phosphate aldolase DND34_RS06110 PF05525 Branched-chain amino acid transport protein DND34_RS06120 PF00155 Aminotransferase class I and II DND34_RS06130 PF00056 lactate/malate dehydrogenase, NAD binding domain DND34_RS06130 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DND34_RS06135 PF03840 Preprotein translocase SecG subunit DND34_RS06140 PF00121 Triosephosphate isomerase DND34_RS06145 PF00162 Phosphoglycerate kinase DND34_RS06150 PF14527 WhiA LAGLIDADG-like domain DND34_RS06150 PF10298 WhiA N-terminal LAGLIDADG-like domain DND34_RS06150 PF02650 WhiA C-terminal HTH domain DND34_RS06155 PF03668 P-loop ATPase protein family DND34_RS06160 PF08501 Shikimate dehydrogenase substrate binding domain DND34_RS06160 PF01488 Shikimate / quinate 5-dehydrogenase DND34_RS06160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DND34_RS06165 PF01541 GIY-YIG catalytic domain DND34_RS06165 PF08459 UvrC Helix-hairpin-helix N-terminal DND34_RS06165 PF02151 UvrB/uvrC motif DND34_RS06170 PF17760 UvrA interaction domain DND34_RS06170 PF00005 ABC transporter DND34_RS06170 PF17755 UvrA DNA-binding domain DND34_RS06210 PF00005 ABC transporter DND34_RS06230 PF12848 ABC transporter DND34_RS06230 PF16326 ABC transporter C-terminal domain DND34_RS06230 PF00005 ABC transporter DND34_RS06240 PF00425 chorismate binding enzyme DND34_RS06240 PF04715 Anthranilate synthase component I, N terminal region DND34_RS06250 PF00977 Histidine biosynthesis protein DND34_RS06255 PF01965 DJ-1/PfpI family DND34_RS06260 PF04055 Radical SAM superfamily DND34_RS06270 PF01765 Ribosome recycling factor DND34_RS06275 PF00696 Amino acid kinase family DND34_RS06280 PF00889 Elongation factor TS DND34_RS06285 PF00318 Ribosomal protein S2 DND34_RS06290 PF01327 Polypeptide deformylase DND34_RS06295 PF00501 AMP-binding enzyme DND34_RS06305 PF00478 IMP dehydrogenase / GMP reductase domain DND34_RS06310 PF00180 Isocitrate/isopropylmalate dehydrogenase DND34_RS06365 PF02467 Transcription factor WhiB DND34_RS06370 PF13614 AAA domain DND34_RS06445 PF00398 Ribosomal RNA adenine dimethylase DND34_RS06465 PF00398 Ribosomal RNA adenine dimethylase DND34_RS06585 PF00145 C-5 cytosine-specific DNA methylase DND34_RS06585 PF18284 DNA methylase N-terminal domain DND34_RS06590 PF09019 EcoRII C terminal DND34_RS06590 PF09217 Restriction endonuclease EcoRII, N-terminal DND34_RS06600 PF07804 HipA-like C-terminal domain DND34_RS06615 PF01131 DNA topoisomerase DND34_RS06615 PF01751 Toprim domain DND34_RS06635 PF01476 LysM domain DND34_RS06635 PF05257 CHAP domain DND34_RS06660 PF02661 Fic/DOC family DND34_RS06660 PF13784 Fic/DOC family N-terminal DND34_RS06680 PF00589 Phage integrase family DND34_RS06680 PF02899 Phage integrase, N-terminal SAM-like domain DND34_RS06695 PF00814 Glycoprotease family DND34_RS06700 PF00583 Acetyltransferase (GNAT) family DND34_RS06705 PF00814 Glycoprotease family DND34_RS06710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DND34_RS06720 PF01979 Amidohydrolase family DND34_RS06730 PF10531 SLBB domain DND34_RS06735 PF08264 Anticodon-binding domain of tRNA DND34_RS06735 PF13603 Leucyl-tRNA synthetase, Domain 2 DND34_RS06735 PF09334 tRNA synthetases class I (M) DND34_RS06740 PF00497 Bacterial extracellular solute-binding proteins, family 3 DND34_RS06745 PF01544 CorA-like Mg2+ transporter protein DND34_RS06750 PF00300 Histidine phosphatase superfamily (branch 1) DND34_RS06775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DND34_RS06785 PF00665 Integrase core domain DND34_RS06785 PF13276 HTH-like domain DND34_RS06785 PF13333 Integrase core domain DND34_RS06790 PF13291 ACT domain DND34_RS06790 PF02824 TGS domain DND34_RS06790 PF04607 Region found in RelA / SpoT proteins DND34_RS06795 PF00692 dUTPase DND34_RS06815 PF00521 DNA gyrase/topoisomerase IV, subunit A DND34_RS06815 PF03989 DNA gyrase C-terminal domain, beta-propeller DND34_RS06825 PF00271 Helicase conserved C-terminal domain DND34_RS06825 PF08494 DEAD/H associated DND34_RS06825 PF00270 DEAD/DEAH box helicase DND34_RS06830 PF00294 pfkB family carbohydrate kinase DND34_RS06840 PF00204 DNA gyrase B DND34_RS06840 PF00986 DNA gyrase B subunit, carboxyl terminus DND34_RS06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DND34_RS06840 PF01751 Toprim domain DND34_RS06845 PF04542 Sigma-70 region 2 DND34_RS06845 PF04539 Sigma-70 region 3 DND34_RS06845 PF04545 Sigma-70, region 4 DND34_RS06845 PF00140 Sigma-70 factor, region 1.2 DND34_RS06855 PF00348 Polyprenyl synthetase DND34_RS06860 PF00069 Protein kinase domain DND34_RS06860 PF03793 PASTA domain DND34_RS06865 PF01553 Acyltransferase DND34_RS06875 PF02885 Glycosyl transferase family, helical bundle domain DND34_RS06875 PF00591 Glycosyl transferase family, a/b domain DND34_RS06880 PF01610 Transposase DND34_RS06880 PF13542 Helix-turn-helix domain of transposase family ISL3 DND34_RS06880 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DND34_RS06885 PF07516 SecA Wing and Scaffold domain DND34_RS06885 PF07517 SecA DEAD-like domain DND34_RS06885 PF02810 SEC-C motif DND34_RS06885 PF01043 SecA preprotein cross-linking domain DND34_RS06890 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DND34_RS06890 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DND34_RS06905 PF00154 recA bacterial DNA recombination protein DND34_RS06920 PF02464 Competence-damaged protein DND34_RS06920 PF18146 Damage-inducible protein CinA KH domain DND34_RS06920 PF00994 Probable molybdopterin binding domain DND34_RS06925 PF01066 CDP-alcohol phosphatidyltransferase DND34_RS06930 PF17854 FtsK alpha domain DND34_RS06930 PF09397 Ftsk gamma domain DND34_RS06930 PF01580 FtsK/SpoIIIE family DND34_RS06930 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DND34_RS06945 PF04055 Radical SAM superfamily DND34_RS06945 PF00919 Uncharacterized protein family UPF0004 DND34_RS06950 PF04607 Region found in RelA / SpoT proteins DND34_RS06960 PF01027 Inhibitor of apoptosis-promoting Bax1 DND34_RS06975 PF00196 Bacterial regulatory proteins, luxR family DND34_RS06975 PF00072 Response regulator receiver domain DND34_RS07000 PF00330 Aconitase family (aconitate hydratase) DND34_RS07000 PF00694 Aconitase C-terminal domain DND34_RS07015 PF05958 tRNA (Uracil-5-)-methyltransferase DND34_RS07030 PF03372 Endonuclease/Exonuclease/phosphatase family DND34_RS07035 PF00005 ABC transporter DND34_RS07035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DND34_RS07040 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07040 PF12911 N-terminal TM domain of oligopeptide transport permease C DND34_RS07045 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DND34_RS07055 PF02899 Phage integrase, N-terminal SAM-like domain DND34_RS07055 PF00589 Phage integrase family DND34_RS07065 PF02153 Prephenate dehydrogenase DND34_RS07070 PF01817 Chorismate mutase type II DND34_RS07070 PF00800 Prephenate dehydratase DND34_RS07070 PF01842 ACT domain DND34_RS07085 PF07690 Major Facilitator Superfamily DND34_RS07090 PF00266 Aminotransferase class-V DND34_RS07095 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DND34_RS07095 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DND34_RS07100 PF00890 FAD binding domain DND34_RS07100 PF02910 Fumarate reductase flavoprotein C-term DND34_RS07105 PF02445 Quinolinate synthetase A protein DND34_RS07115 PF04079 Segregation and condensation complex subunit ScpB DND34_RS07120 PF02616 Segregation and condensation protein ScpA DND34_RS07125 PF13614 AAA domain DND34_RS07130 PF00005 ABC transporter DND34_RS07130 PF12704 MacB-like periplasmic core domain DND34_RS07130 PF02687 FtsX-like permease family DND34_RS07135 PF02899 Phage integrase, N-terminal SAM-like domain DND34_RS07135 PF00589 Phage integrase family DND34_RS07140 PF00453 Ribosomal protein L20 DND34_RS07145 PF01632 Ribosomal protein L35 DND34_RS07150 PF05198 Translation initiation factor IF-3, N-terminal domain DND34_RS07150 PF00707 Translation initiation factor IF-3, C-terminal domain DND34_RS07170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DND34_RS07170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DND34_RS07175 PF04073 Aminoacyl-tRNA editing domain DND34_RS07180 PF02401 LytB protein DND34_RS07185 PF01263 Aldose 1-epimerase DND34_RS07190 PF01263 Aldose 1-epimerase DND34_RS07200 PF08281 Sigma-70, region 4 DND34_RS07200 PF04542 Sigma-70 region 2 DND34_RS07205 PF02875 Mur ligase family, glutamate ligase domain DND34_RS07205 PF08245 Mur ligase middle domain DND34_RS07220 PF08245 Mur ligase middle domain DND34_RS07220 PF02875 Mur ligase family, glutamate ligase domain DND34_RS07230 PF05195 Aminopeptidase P, N-terminal domain DND34_RS07230 PF00557 Metallopeptidase family M24 DND34_RS07235 PF13344 Haloacid dehalogenase-like hydrolase DND34_RS07235 PF00293 NUDIX domain DND34_RS07240 PF00005 ABC transporter DND34_RS07240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DND34_RS07245 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07245 PF12911 N-terminal TM domain of oligopeptide transport permease C DND34_RS07250 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DND34_RS07260 PF01979 Amidohydrolase family DND34_RS07265 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DND34_RS07270 PF00480 ROK family DND34_RS07275 PF00480 ROK family DND34_RS07280 PF00480 ROK family DND34_RS07300 PF00356 Bacterial regulatory proteins, lacI family DND34_RS07310 PF01915 Glycosyl hydrolase family 3 C-terminal domain DND34_RS07310 PF07691 PA14 domain DND34_RS07310 PF00933 Glycosyl hydrolase family 3 N terminal domain DND34_RS07310 PF14310 Fibronectin type III-like domain DND34_RS07320 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07325 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07345 PF02580 D-Tyr-tRNA(Tyr) deacylase DND34_RS07355 PF01661 Macro domain DND34_RS07370 PF08245 Mur ligase middle domain DND34_RS07370 PF02875 Mur ligase family, glutamate ligase domain DND34_RS07370 PF01225 Mur ligase family, catalytic domain DND34_RS07375 PF04101 Glycosyltransferase family 28 C-terminal domain DND34_RS07375 PF03033 Glycosyltransferase family 28 N-terminal domain DND34_RS07380 PF01098 Cell cycle protein DND34_RS07385 PF08245 Mur ligase middle domain DND34_RS07390 PF00953 Glycosyl transferase family 4 DND34_RS07395 PF01225 Mur ligase family, catalytic domain DND34_RS07395 PF02875 Mur ligase family, glutamate ligase domain DND34_RS07395 PF08245 Mur ligase middle domain DND34_RS07405 PF00905 Penicillin binding protein transpeptidase domain DND34_RS07405 PF03717 Penicillin-binding Protein dimerisation domain DND34_RS07415 PF01795 MraW methylase family DND34_RS07420 PF02381 MraZ protein, putative antitoxin-like DND34_RS07430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DND34_RS07430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DND34_RS07435 PF03477 ATP cone domain DND34_RS07445 PF00717 Peptidase S24-like DND34_RS07445 PF01726 LexA DNA binding domain DND34_RS07450 PF01545 Cation efflux family DND34_RS07455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DND34_RS07455 PF00056 lactate/malate dehydrogenase, NAD binding domain DND34_RS07460 PF16360 GTP-binding GTPase Middle Region DND34_RS07460 PF13167 GTP-binding GTPase N-terminal DND34_RS07460 PF01926 50S ribosome-binding GTPase DND34_RS07465 PF05175 Methyltransferase small domain DND34_RS07470 PF00270 DEAD/DEAH box helicase DND34_RS07470 PF11898 Domain of unknown function (DUF3418) DND34_RS07470 PF04408 Helicase associated domain (HA2) DND34_RS07470 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DND34_RS07470 PF00271 Helicase conserved C-terminal domain DND34_RS07485 PF00120 Glutamine synthetase, catalytic domain DND34_RS07485 PF03951 Glutamine synthetase, beta-Grasp domain DND34_RS07495 PF00977 Histidine biosynthesis protein DND34_RS07500 PF00117 Glutamine amidotransferase class-I DND34_RS07510 PF00475 Imidazoleglycerol-phosphate dehydratase DND34_RS07515 PF00155 Aminotransferase class I and II DND34_RS07520 PF00815 Histidinol dehydrogenase DND34_RS07525 PF00708 Acylphosphatase DND34_RS07530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DND34_RS07530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DND34_RS07535 PF00248 Aldo/keto reductase family DND34_RS07560 PF06100 MCRA family DND34_RS07565 PF13811 Domain of unknown function (DUF4186) DND34_RS07570 PF02811 PHP domain DND34_RS07570 PF14579 Helix-hairpin-helix motif DND34_RS07570 PF07733 Bacterial DNA polymerase III alpha NTPase domain DND34_RS07570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DND34_RS07610 PF00580 UvrD/REP helicase N-terminal domain DND34_RS07610 PF13361 UvrD-like helicase C-terminal domain DND34_RS07610 PF12705 PD-(D/E)XK nuclease superfamily DND34_RS07615 PF12705 PD-(D/E)XK nuclease superfamily DND34_RS07635 PF13173 AAA domain DND34_RS07635 PF13635 Domain of unknown function (DUF4143) DND34_RS07640 PF00849 RNA pseudouridylate synthase DND34_RS07645 PF01252 Signal peptidase (SPase) II DND34_RS07660 PF04472 Cell division protein SepF DND34_RS07665 PF00091 Tubulin/FtsZ family, GTPase domain DND34_RS07665 PF12327 FtsZ family, C-terminal domain DND34_RS07670 PF01207 Dihydrouridine synthase (Dus) DND34_RS07675 PF03129 Anticodon binding domain DND34_RS07675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DND34_RS07680 PF02110 Hydroxyethylthiazole kinase family DND34_RS07685 PF13667 ThiC-associated domain DND34_RS07685 PF02581 Thiamine monophosphate synthase DND34_RS07685 PF01964 Radical SAM ThiC family DND34_RS07695 PF08543 Phosphomethylpyrimidine kinase DND34_RS07695 PF02581 Thiamine monophosphate synthase DND34_RS07700 PF01910 Thiamine-binding protein DND34_RS07705 PF07690 Major Facilitator Superfamily DND34_RS07720 PF00356 Bacterial regulatory proteins, lacI family DND34_RS07725 PF01306 LacY proton/sugar symporter DND34_RS07730 PF08244 Glycosyl hydrolases family 32 C terminal DND34_RS07730 PF00251 Glycosyl hydrolases family 32 N-terminal domain DND34_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07745 PF01156 Inosine-uridine preferring nucleoside hydrolase DND34_RS07750 PF01255 Putative undecaprenyl diphosphate synthase DND34_RS07755 PF11967 Recombination protein O N terminal DND34_RS07755 PF02565 Recombination protein O C terminal DND34_RS07765 PF04551 GcpE protein DND34_RS07770 PF13288 DXP reductoisomerase C-terminal domain DND34_RS07770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DND34_RS07770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DND34_RS07785 PF11253 Protein of unknown function (DUF3052) DND34_RS07790 PF13180 PDZ domain DND34_RS07790 PF05362 Lon protease (S16) C-terminal proteolytic domain DND34_RS07800 PF00580 UvrD/REP helicase N-terminal domain DND34_RS07800 PF00570 HRDC domain DND34_RS07800 PF13361 UvrD-like helicase C-terminal domain DND34_RS07825 PF01678 Diaminopimelate epimerase DND34_RS07830 PF01177 Asp/Glu/Hydantoin racemase DND34_RS07845 PF01053 Cys/Met metabolism PLP-dependent enzyme DND34_RS07850 PF09383 NIL domain DND34_RS07850 PF00005 ABC transporter DND34_RS07870 PF01053 Cys/Met metabolism PLP-dependent enzyme DND34_RS07880 PF00005 ABC transporter DND34_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS07900 PF03764 Elongation factor G, domain IV DND34_RS07900 PF00009 Elongation factor Tu GTP binding domain DND34_RS07900 PF03144 Elongation factor Tu domain 2 DND34_RS07900 PF14492 Elongation Factor G, domain II DND34_RS07900 PF00679 Elongation factor G C-terminus DND34_RS07905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DND34_RS07905 PF00929 Exonuclease DND34_RS07905 PF01336 OB-fold nucleic acid binding domain DND34_RS07905 PF14579 Helix-hairpin-helix motif DND34_RS07905 PF11490 DNA polymerase III polC-type N-terminus II DND34_RS07905 PF02811 PHP domain DND34_RS07905 PF07733 Bacterial DNA polymerase III alpha NTPase domain DND34_RS07910 PF00625 Guanylate kinase DND34_RS07915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DND34_RS07920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DND34_RS07920 PF02142 MGS-like domain DND34_RS07920 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DND34_RS07925 PF00117 Glutamine amidotransferase class-I DND34_RS07925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DND34_RS07930 PF01029 NusB family DND34_RS07935 PF01132 Elongation factor P (EF-P) OB domain DND34_RS07935 PF08207 Elongation factor P (EF-P) KOW-like domain DND34_RS07935 PF09285 Elongation factor P, C-terminal DND34_RS07940 PF12704 MacB-like periplasmic core domain DND34_RS07940 PF02687 FtsX-like permease family DND34_RS07940 PF00005 ABC transporter DND34_RS07945 PF03649 Uncharacterised protein family (UPF0014) DND34_RS07950 PF03734 L,D-transpeptidase catalytic domain DND34_RS07975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DND34_RS07975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DND34_RS07980 PF13802 Galactose mutarotase-like DND34_RS07980 PF01055 Glycosyl hydrolases family 31 DND34_RS07995 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS08010 PF01883 Iron-sulfur cluster assembly protein DND34_RS08010 PF10609 NUBPL iron-transfer P-loop NTPase DND34_RS08015 PF01653 NAD-dependent DNA ligase adenylation domain DND34_RS08015 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DND34_RS08015 PF12826 Helix-hairpin-helix motif DND34_RS08015 PF03120 NAD-dependent DNA ligase OB-fold domain DND34_RS08015 PF00533 BRCA1 C Terminus (BRCT) domain DND34_RS08035 PF00005 ABC transporter DND34_RS08045 PF00480 ROK family DND34_RS08065 PF00005 ABC transporter DND34_RS08065 PF02361 Cobalt transport protein DND34_RS08090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DND34_RS08095 PF07690 Major Facilitator Superfamily DND34_RS08100 PF02653 Branched-chain amino acid transport system / permease component DND34_RS08105 PF02653 Branched-chain amino acid transport system / permease component DND34_RS08110 PF00005 ABC transporter DND34_RS08115 PF13407 Periplasmic binding protein domain DND34_RS08120 PF10647 Lipoprotein LpqB beta-propeller domain DND34_RS08125 PF00672 HAMP domain DND34_RS08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DND34_RS08125 PF00512 His Kinase A (phospho-acceptor) domain DND34_RS08130 PF00486 Transcriptional regulatory protein, C terminal DND34_RS08130 PF00072 Response regulator receiver domain DND34_RS08135 PF12002 MgsA AAA+ ATPase C terminal DND34_RS08135 PF16193 AAA C-terminal domain DND34_RS08135 PF00004 ATPase family associated with various cellular activities (AAA) DND34_RS08140 PF08148 DSHCT (NUC185) domain DND34_RS08140 PF00270 DEAD/DEAH box helicase DND34_RS08140 PF00271 Helicase conserved C-terminal domain DND34_RS08145 PF03976 Polyphosphate kinase 2 (PPK2) DND34_RS08165 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS08170 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS08175 PF00497 Bacterial extracellular solute-binding proteins, family 3 DND34_RS08180 PF00005 ABC transporter DND34_RS08190 PF00152 tRNA synthetases class II (D, K and N) DND34_RS08190 PF02938 GAD domain DND34_RS08190 PF01336 OB-fold nucleic acid binding domain DND34_RS08195 PF03129 Anticodon binding domain DND34_RS08195 PF13393 Histidyl-tRNA synthetase DND34_RS08200 PF03993 Domain of Unknown Function (DUF349) DND34_RS08210 PF02633 Creatinine amidohydrolase DND34_RS08215 PF08946 Osmosensory transporter coiled coil DND34_RS08215 PF00083 Sugar (and other) transporter DND34_RS08225 PF07969 Amidohydrolase family DND34_RS08230 PF00004 ATPase family associated with various cellular activities (AAA) DND34_RS08230 PF10431 C-terminal, D2-small domain, of ClpB protein DND34_RS08230 PF07724 AAA domain (Cdc48 subfamily) DND34_RS08230 PF17871 AAA lid domain DND34_RS08230 PF02861 Clp amino terminal domain, pathogenicity island component DND34_RS08235 PF00582 Universal stress protein family DND34_RS08240 PF11228 Protein of unknown function (DUF3027) DND34_RS08245 PF00313 'Cold-shock' DNA-binding domain DND34_RS08250 PF00672 HAMP domain DND34_RS08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DND34_RS08250 PF00512 His Kinase A (phospho-acceptor) domain DND34_RS08255 PF00486 Transcriptional regulatory protein, C terminal DND34_RS08255 PF00072 Response regulator receiver domain DND34_RS08270 PF00118 TCP-1/cpn60 chaperonin family DND34_RS08275 PF00313 'Cold-shock' DNA-binding domain DND34_RS08285 PF03167 Uracil DNA glycosylase superfamily DND34_RS08290 PF17863 AAA lid domain DND34_RS08290 PF07726 ATPase family associated with various cellular activities (AAA) DND34_RS08340 PF00206 Lyase DND34_RS08340 PF08328 Adenylosuccinate lyase C-terminal DND34_RS08350 PF00216 Bacterial DNA-binding protein DND34_RS08355 PF03136 Pup-ligase protein DND34_RS08360 PF05639 Pup-like protein DND34_RS08365 PF00459 Inositol monophosphatase family DND34_RS08370 PF03136 Pup-ligase protein DND34_RS08375 PF17758 Proteasomal ATPase OB N-terminal domain DND34_RS08375 PF16450 Proteasomal ATPase OB C-terminal domain DND34_RS08375 PF00004 ATPase family associated with various cellular activities (AAA) DND34_RS08380 PF09335 SNARE associated Golgi protein DND34_RS08390 PF17764 3′ DNA-binding domain (3′BD) DND34_RS08400 PF00551 Formyl transferase DND34_RS08400 PF02911 Formyl transferase, C-terminal domain DND34_RS08405 PF00920 Dehydratase family DND34_RS08410 PF01192 RNA polymerase Rpb6 DND34_RS08415 PF02772 S-adenosylmethionine synthetase, central domain DND34_RS08415 PF00438 S-adenosylmethionine synthetase, N-terminal domain DND34_RS08415 PF02773 S-adenosylmethionine synthetase, C-terminal domain DND34_RS08420 PF18766 SWI2/SNF2 ATPase DND34_RS08420 PF12008 Type I restriction and modification enzyme - subunit R C terminal DND34_RS08420 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DND34_RS08435 PF02384 N-6 DNA Methylase DND34_RS08435 PF12161 HsdM N-terminal domain DND34_RS08450 PF02899 Phage integrase, N-terminal SAM-like domain DND34_RS08450 PF00589 Phage integrase family DND34_RS08460 PF00133 tRNA synthetases class I (I, L, M and V) DND34_RS08460 PF08264 Anticodon-binding domain of tRNA DND34_RS08465 PF00155 Aminotransferase class I and II DND34_RS08470 PF02929 Beta galactosidase small chain DND34_RS08470 PF00703 Glycosyl hydrolases family 2 DND34_RS08470 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DND34_RS08470 PF16353 Domain of unknown function(DUF4981) DND34_RS08470 PF02837 Glycosyl hydrolases family 2, sugar binding domain DND34_RS08475 PF00356 Bacterial regulatory proteins, lacI family DND34_RS08490 PF00465 Iron-containing alcohol dehydrogenase DND34_RS08495 PF13419 Haloacid dehalogenase-like hydrolase DND34_RS08500 PF01156 Inosine-uridine preferring nucleoside hydrolase DND34_RS08505 PF00294 pfkB family carbohydrate kinase DND34_RS08510 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DND34_RS08515 PF00005 ABC transporter DND34_RS08520 PF00005 ABC transporter DND34_RS08525 PF02361 Cobalt transport protein DND34_RS08535 PF00294 pfkB family carbohydrate kinase DND34_RS08540 PF00005 ABC transporter DND34_RS08540 PF00664 ABC transporter transmembrane region DND34_RS08545 PF00664 ABC transporter transmembrane region DND34_RS08545 PF00005 ABC transporter DND34_RS08550 PF01047 MarR family DND34_RS08555 PF00933 Glycosyl hydrolase family 3 N terminal domain DND34_RS08555 PF14310 Fibronectin type III-like domain DND34_RS08555 PF01915 Glycosyl hydrolase family 3 C-terminal domain DND34_RS08570 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DND34_RS08570 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DND34_RS08605 PF02308 MgtC family DND34_RS08615 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain DND34_RS08615 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DND34_RS08615 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain DND34_RS08615 PF08531 Alpha-L-rhamnosidase N-terminal domain DND34_RS08625 PF00356 Bacterial regulatory proteins, lacI family DND34_RS08635 PF01425 Amidase DND34_RS08645 PF13416 Bacterial extracellular solute-binding protein DND34_RS08655 PF13340 Putative transposase of IS4/5 family (DUF4096) DND34_RS08665 PF01915 Glycosyl hydrolase family 3 C-terminal domain DND34_RS08665 PF14310 Fibronectin type III-like domain DND34_RS08665 PF00933 Glycosyl hydrolase family 3 N terminal domain DND34_RS08670 PF00440 Bacterial regulatory proteins, tetR family DND34_RS08690 PF13597 Anaerobic ribonucleoside-triphosphate reductase DND34_RS08690 PF03477 ATP cone domain DND34_RS08700 PF13742 OB-fold nucleic acid binding domain DND34_RS08700 PF02601 Exonuclease VII, large subunit DND34_RS08705 PF02609 Exonuclease VII small subunit DND34_RS08710 PF02525 Flavodoxin-like fold DND34_RS08715 PF00501 AMP-binding enzyme DND34_RS08720 PF01741 Large-conductance mechanosensitive channel, MscL DND34_RS08745 PF02541 Ppx/GppA phosphatase family DND34_RS08750 PF00155 Aminotransferase class I and II DND34_RS08755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DND34_RS08755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DND34_RS08760 PF03852 DNA mismatch endonuclease Vsr DND34_RS08775 PF00176 SNF2 family N-terminal domain DND34_RS08775 PF00271 Helicase conserved C-terminal domain DND34_RS08775 PF04434 SWIM zinc finger DND34_RS08785 PF14602 Hexapeptide repeat of succinyl-transferase DND34_RS08785 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DND34_RS08790 PF00285 Citrate synthase, C-terminal domain DND34_RS08795 PF00557 Metallopeptidase family M24 DND34_RS08805 PF05649 Peptidase family M13 DND34_RS08805 PF01431 Peptidase family M13 DND34_RS08815 PF04073 Aminoacyl-tRNA editing domain DND34_RS08815 PF03129 Anticodon binding domain DND34_RS08815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DND34_RS08830 PF01875 Memo-like protein DND34_RS08845 PF00478 IMP dehydrogenase / GMP reductase domain DND34_RS08845 PF00571 CBS domain DND34_RS08850 PF00953 Glycosyl transferase family 4 DND34_RS08855 PF01300 Telomere recombination DND34_RS08860 PF12464 Maltose acetyltransferase DND34_RS08860 PF00132 Bacterial transferase hexapeptide (six repeats) DND34_RS08865 PF00005 ABC transporter DND34_RS08870 PF12399 Branched-chain amino acid ATP-binding cassette transporter DND34_RS08870 PF00005 ABC transporter DND34_RS08875 PF11862 Domain of unknown function (DUF3382) DND34_RS08875 PF02653 Branched-chain amino acid transport system / permease component DND34_RS08880 PF02653 Branched-chain amino acid transport system / permease component DND34_RS08885 PF13458 Periplasmic binding protein DND34_RS08890 PF17827 PrmC N-terminal domain DND34_RS08895 PF00472 RF-1 domain DND34_RS08895 PF03462 PCRF domain DND34_RS08900 PF01197 Ribosomal protein L31 DND34_RS08910 PF00480 ROK family DND34_RS08915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DND34_RS08915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DND34_RS08940 PF14602 Hexapeptide repeat of succinyl-transferase DND34_RS08940 PF12464 Maltose acetyltransferase DND34_RS08945 PF04616 Glycosyl hydrolases family 43 DND34_RS08945 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DND34_RS08950 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DND34_RS08950 PF04616 Glycosyl hydrolases family 43 DND34_RS08955 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS08960 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS08965 PF01547 Bacterial extracellular solute-binding protein DND34_RS08970 PF00356 Bacterial regulatory proteins, lacI family DND34_RS08975 PF00465 Iron-containing alcohol dehydrogenase DND34_RS08980 PF01261 Xylose isomerase-like TIM barrel DND34_RS08985 PF07690 Major Facilitator Superfamily DND34_RS09000 PF01327 Polypeptide deformylase DND34_RS09005 PF07690 Major Facilitator Superfamily DND34_RS09020 PF02653 Branched-chain amino acid transport system / permease component DND34_RS09025 PF00005 ABC transporter DND34_RS09030 PF13407 Periplasmic binding protein domain DND34_RS09035 PF00480 ROK family DND34_RS09040 PF00005 ABC transporter DND34_RS09045 PF00480 ROK family DND34_RS09055 PF00005 ABC transporter DND34_RS09055 PF12848 ABC transporter DND34_RS09070 PF02152 Dihydroneopterin aldolase DND34_RS09075 PF00809 Pterin binding enzyme DND34_RS09080 PF01227 GTP cyclohydrolase I DND34_RS09085 PF01434 Peptidase family M41 DND34_RS09085 PF17862 AAA+ lid domain DND34_RS09085 PF00004 ATPase family associated with various cellular activities (AAA) DND34_RS09095 PF01171 PP-loop family DND34_RS09095 PF09179 TilS substrate binding domain DND34_RS09110 PF00005 ABC transporter DND34_RS09110 PF13732 Domain of unknown function (DUF4162) DND34_RS09115 PF00535 Glycosyl transferase family 2 DND34_RS09125 PF00535 Glycosyl transferase family 2 DND34_RS09130 PF00465 Iron-containing alcohol dehydrogenase DND34_RS09155 PF16363 GDP-mannose 4,6 dehydratase DND34_RS09160 PF02390 Putative methyltransferase DND34_RS09170 PF03591 AzlC protein DND34_RS09175 PF05437 Branched-chain amino acid transport protein (AzlD) DND34_RS09180 PF01451 Low molecular weight phosphotyrosine protein phosphatase DND34_RS09190 PF00303 Thymidylate synthase DND34_RS09195 PF02566 OsmC-like protein DND34_RS09200 PF00582 Universal stress protein family DND34_RS09205 PF00877 NlpC/P60 family DND34_RS09215 PF05257 CHAP domain DND34_RS09215 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DND34_RS09220 PF00266 Aminotransferase class-V DND34_RS09230 PF00512 His Kinase A (phospho-acceptor) domain DND34_RS09230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DND34_RS09235 PF01895 PhoU domain DND34_RS09240 PF00300 Histidine phosphatase superfamily (branch 1) DND34_RS09245 PF01040 UbiA prenyltransferase family DND34_RS09250 PF00152 tRNA synthetases class II (D, K and N) DND34_RS09250 PF01336 OB-fold nucleic acid binding domain DND34_RS09260 PF07690 Major Facilitator Superfamily DND34_RS09295 PF00196 Bacterial regulatory proteins, luxR family DND34_RS09295 PF00072 Response regulator receiver domain DND34_RS09300 PF16363 GDP-mannose 4,6 dehydratase DND34_RS09305 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DND34_RS09305 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DND34_RS09310 PF01636 Phosphotransferase enzyme family DND34_RS09315 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain DND34_RS09315 PF17386 Lacto-N-biose phosphorylase C-terminal domain DND34_RS09315 PF17385 Lacto-N-biose phosphorylase central domain DND34_RS09320 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS09325 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS09345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DND34_RS09345 PF02403 Seryl-tRNA synthetase N-terminal domain DND34_RS09350 PF02142 MGS-like domain DND34_RS09350 PF00781 Diacylglycerol kinase catalytic domain DND34_RS09355 PF00874 PRD domain DND34_RS09355 PF03123 CAT RNA binding domain DND34_RS09360 PF02378 Phosphotransferase system, EIIC DND34_RS09360 PF00367 phosphotransferase system, EIIB DND34_RS09360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DND34_RS09365 PF00083 Sugar (and other) transporter DND34_RS09385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DND34_RS09385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DND34_RS09395 PF00075 RNase H DND34_RS09400 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DND34_RS09420 PF06574 FAD synthetase DND34_RS09420 PF01687 Riboflavin kinase DND34_RS09425 PF01509 TruB family pseudouridylate synthase (N terminal domain) DND34_RS09425 PF09142 tRNA Pseudouridine synthase II, C terminal DND34_RS09425 PF16198 tRNA pseudouridylate synthase B C-terminal domain DND34_RS09430 PF02033 Ribosome-binding factor A DND34_RS09435 PF00009 Elongation factor Tu GTP binding domain DND34_RS09435 PF04760 Translation initiation factor IF-2, N-terminal region DND34_RS09435 PF11987 Translation-initiation factor 2 DND34_RS09440 PF13184 NusA-like KH domain DND34_RS09440 PF08529 NusA N-terminal domain DND34_RS09450 PF00356 Bacterial regulatory proteins, lacI family DND34_RS09455 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DND34_RS09470 PF14403 Circularly permuted ATP-grasp type 2 DND34_RS09475 PF01416 tRNA pseudouridine synthase DND34_RS09480 PF01196 Ribosomal protein L17 DND34_RS09485 PF01000 RNA polymerase Rpb3/RpoA insert domain DND34_RS09485 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DND34_RS09485 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DND34_RS09490 PF00411 Ribosomal protein S11 DND34_RS09495 PF00416 Ribosomal protein S13/S18 DND34_RS09500 PF00444 Ribosomal protein L36 DND34_RS09505 PF01176 Translation initiation factor 1A / IF-1 DND34_RS09515 PF00344 SecY translocase DND34_RS09520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DND34_RS09525 PF00327 Ribosomal protein L30p/L7e DND34_RS09530 PF00333 Ribosomal protein S5, N-terminal domain DND34_RS09530 PF03719 Ribosomal protein S5, C-terminal domain DND34_RS09535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DND34_RS09540 PF00347 Ribosomal protein L6 DND34_RS09545 PF00410 Ribosomal protein S8 DND34_RS09550 PF00253 Ribosomal protein S14p/S29e DND34_RS09555 PF00281 Ribosomal protein L5 DND34_RS09555 PF00673 ribosomal L5P family C-terminus DND34_RS09560 PF00467 KOW motif DND34_RS09560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DND34_RS09565 PF00238 Ribosomal protein L14p/L23e DND34_RS09570 PF00366 Ribosomal protein S17 DND34_RS09575 PF00831 Ribosomal L29 protein DND34_RS09580 PF00252 Ribosomal protein L16p/L10e DND34_RS09585 PF00189 Ribosomal protein S3, C-terminal domain DND34_RS09585 PF07650 KH domain DND34_RS09590 PF00237 Ribosomal protein L22p/L17e DND34_RS09595 PF00203 Ribosomal protein S19 DND34_RS09600 PF00181 Ribosomal Proteins L2, RNA binding domain DND34_RS09600 PF03947 Ribosomal Proteins L2, C-terminal domain DND34_RS09605 PF00276 Ribosomal protein L23 DND34_RS09610 PF00573 Ribosomal protein L4/L1 family DND34_RS09615 PF00297 Ribosomal protein L3 DND34_RS09620 PF00338 Ribosomal protein S10p/S20e DND34_RS09630 PF00465 Iron-containing alcohol dehydrogenase DND34_RS09630 PF00171 Aldehyde dehydrogenase family DND34_RS09640 PF00128 Alpha amylase, catalytic domain DND34_RS09640 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DND34_RS09645 PF00380 Ribosomal protein S9/S16 DND34_RS09650 PF00572 Ribosomal protein L13 DND34_RS09655 PF02446 4-alpha-glucanotransferase DND34_RS09665 PF09186 Domain of unknown function (DUF1949) DND34_RS09665 PF01205 Uncharacterized protein family UPF0029 DND34_RS09670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DND34_RS09670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DND34_RS09670 PF01842 ACT domain DND34_RS09685 PF00892 EamA-like transporter family DND34_RS09690 PF11799 impB/mucB/samB family C-terminal domain DND34_RS09690 PF00817 impB/mucB/samB family DND34_RS09695 PF00128 Alpha amylase, catalytic domain DND34_RS09700 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS09715 PF00356 Bacterial regulatory proteins, lacI family DND34_RS09720 PF00155 Aminotransferase class I and II DND34_RS09725 PF00037 4Fe-4S binding domain DND34_RS09730 PF13520 Amino acid permease DND34_RS09735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DND34_RS09735 PF01565 FAD binding domain DND34_RS09740 PF00471 Ribosomal protein L33 DND34_RS09760 PF01053 Cys/Met metabolism PLP-dependent enzyme DND34_RS09765 PF00166 Chaperonin 10 Kd subunit DND34_RS09810 PF00542 Ribosomal protein L7/L12 C-terminal domain DND34_RS09810 PF16320 Ribosomal protein L7/L12 dimerisation domain DND34_RS09815 PF00466 Ribosomal protein L10 DND34_RS09825 PF00860 Permease family DND34_RS09830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DND34_RS09830 PF01138 3' exoribonuclease family, domain 1 DND34_RS09830 PF00575 S1 RNA binding domain DND34_RS09830 PF00013 KH domain DND34_RS09835 PF00312 Ribosomal protein S15 DND34_RS09845 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DND34_RS09845 PF04616 Glycosyl hydrolases family 43 DND34_RS09850 PF04616 Glycosyl hydrolases family 43 DND34_RS09850 PF03422 Carbohydrate binding module (family 6) DND34_RS09860 PF01695 IstB-like ATP binding protein DND34_RS09910 PF01648 4'-phosphopantetheinyl transferase superfamily DND34_RS09920 PF01039 Carboxyl transferase domain DND34_RS09925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DND34_RS09925 PF00364 Biotin-requiring enzyme DND34_RS09925 PF02785 Biotin carboxylase C-terminal domain DND34_RS09925 PF00289 Biotin carboxylase, N-terminal domain DND34_RS09930 PF02632 BioY family DND34_RS09945 PF17853 GGDEF-like domain DND34_RS09945 PF13556 PucR C-terminal helix-turn-helix domain DND34_RS09975 PF00687 Ribosomal protein L1p/L10e family DND34_RS09980 PF03946 Ribosomal protein L11, N-terminal domain DND34_RS09980 PF00298 Ribosomal protein L11, RNA binding domain DND34_RS09985 PF02357 Transcription termination factor nusG DND34_RS09990 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DND34_RS10000 PF00155 Aminotransferase class I and II DND34_RS10005 PF01472 PUA domain DND34_RS10005 PF00696 Amino acid kinase family DND34_RS10010 PF01926 50S ribosome-binding GTPase DND34_RS10010 PF01018 GTP1/OBG DND34_RS10010 PF09269 Domain of unknown function (DUF1967) DND34_RS10015 PF01016 Ribosomal L27 protein DND34_RS10020 PF00829 Ribosomal prokaryotic L21 protein DND34_RS10025 PF10150 Ribonuclease E/G family DND34_RS10030 PF07687 Peptidase dimerisation domain DND34_RS10030 PF01546 Peptidase family M20/M25/M40 DND34_RS10055 PF02545 Maf-like protein DND34_RS10055 PF00293 NUDIX domain DND34_RS10060 PF00288 GHMP kinases N terminal domain DND34_RS10065 PF01842 ACT domain DND34_RS10065 PF00742 Homoserine dehydrogenase DND34_RS10065 PF03447 Homoserine dehydrogenase, NAD binding domain DND34_RS10070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DND34_RS10070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DND34_RS10075 PF00750 tRNA synthetases class I (R) DND34_RS10075 PF05746 DALR anticodon binding domain DND34_RS10075 PF03485 Arginyl tRNA synthetase N terminal domain DND34_RS10080 PF17932 Tetracyclin repressor-like, C-terminal domain DND34_RS10080 PF00440 Bacterial regulatory proteins, tetR family DND34_RS10090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DND34_RS10090 PF03466 LysR substrate binding domain DND34_RS10095 PF00155 Aminotransferase class I and II DND34_RS10100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DND34_RS10105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DND34_RS10105 PF07992 Pyridine nucleotide-disulphide oxidoreductase DND34_RS10110 PF01180 Dihydroorotate dehydrogenase DND34_RS10125 PF00694 Aconitase C-terminal domain DND34_RS10130 PF00330 Aconitase family (aconitate hydratase) DND34_RS10145 PF13090 Polyphosphate kinase C-terminal domain 2 DND34_RS10145 PF17941 Polyphosphate kinase C-terminal domain 1 DND34_RS10145 PF02503 Polyphosphate kinase middle domain DND34_RS10145 PF13089 Polyphosphate kinase N-terminal domain DND34_RS10150 PF00293 NUDIX domain DND34_RS10150 PF00300 Histidine phosphatase superfamily (branch 1) DND34_RS10170 PF02590 Predicted SPOUT methyltransferase DND34_RS10175 PF03009 Glycerophosphoryl diester phosphodiesterase family DND34_RS10180 PF00749 tRNA synthetases class I (E and Q), catalytic domain DND34_RS10185 PF17871 AAA lid domain DND34_RS10185 PF00004 ATPase family associated with various cellular activities (AAA) DND34_RS10185 PF10431 C-terminal, D2-small domain, of ClpB protein DND34_RS10185 PF07724 AAA domain (Cdc48 subfamily) DND34_RS10185 PF02861 Clp amino terminal domain, pathogenicity island component DND34_RS10190 PF00221 Aromatic amino acid lyase DND34_RS10195 PF01614 Bacterial transcriptional regulator DND34_RS10195 PF09339 IclR helix-turn-helix domain DND34_RS10205 PF01557 Fumarylacetoacetate (FAA) hydrolase family DND34_RS10215 PF03275 UDP-galactopyranose mutase DND34_RS10225 PF16363 GDP-mannose 4,6 dehydratase DND34_RS10230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DND34_RS10230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DND34_RS10230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DND34_RS10240 PF17994 Galactofuranosyltransferase 2 N-terminal DND34_RS10265 PF00535 Glycosyl transferase family 2 DND34_RS10270 PF01061 ABC-2 type transporter DND34_RS10275 PF00005 ABC transporter DND34_RS10275 PF14524 Wzt C-terminal domain DND34_RS10305 PF01695 IstB-like ATP binding protein DND34_RS10350 PF01520 N-acetylmuramoyl-L-alanine amidase DND34_RS10350 PF04122 Putative cell wall binding repeat 2 DND34_RS10360 PF00535 Glycosyl transferase family 2 DND34_RS10385 PF00884 Sulfatase DND34_RS10420 PF00005 ABC transporter DND34_RS10435 PF02705 K+ potassium transporter DND34_RS10440 PF01026 TatD related DNase DND34_RS10465 PF01695 IstB-like ATP binding protein DND34_RS10470 PF01695 IstB-like ATP binding protein DND34_RS10480 PF00009 Elongation factor Tu GTP binding domain DND34_RS10480 PF14492 Elongation Factor G, domain II DND34_RS10480 PF00679 Elongation factor G C-terminus DND34_RS10480 PF03764 Elongation factor G, domain IV DND34_RS10495 PF00356 Bacterial regulatory proteins, lacI family DND34_RS10500 PF12833 Helix-turn-helix domain DND34_RS10500 PF02311 AraC-like ligand binding domain DND34_RS10505 PF07944 Beta-L-arabinofuranosidase, GH127 DND34_RS10510 PF03051 Peptidase C1-like family DND34_RS10525 PF09334 tRNA synthetases class I (M) DND34_RS10525 PF08264 Anticodon-binding domain of tRNA DND34_RS10540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DND34_RS10565 PF00664 ABC transporter transmembrane region DND34_RS10565 PF00005 ABC transporter DND34_RS10570 PF00664 ABC transporter transmembrane region DND34_RS10570 PF00005 ABC transporter DND34_RS10575 PF01047 MarR family DND34_RS10600 PF00324 Amino acid permease DND34_RS10610 PF12704 MacB-like periplasmic core domain DND34_RS10610 PF02687 FtsX-like permease family DND34_RS10610 PF00005 ABC transporter DND34_RS10620 PF00324 Amino acid permease DND34_RS10650 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS10655 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS10660 PF00356 Bacterial regulatory proteins, lacI family DND34_RS10670 PF00300 Histidine phosphatase superfamily (branch 1) DND34_RS10680 PF00881 Nitroreductase family DND34_RS10685 PF01061 ABC-2 type transporter DND34_RS10730 PF02146 Sir2 family DND34_RS10735 PF00291 Pyridoxal-phosphate dependent enzyme DND34_RS10735 PF13291 ACT domain DND34_RS10740 PF00128 Alpha amylase, catalytic domain DND34_RS10750 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS10755 PF00528 Binding-protein-dependent transport system inner membrane component DND34_RS10770 PF16875 Glycosyl hydrolase family 36 N-terminal domain DND34_RS10770 PF16874 Glycosyl hydrolase family 36 C-terminal domain DND34_RS10775 PF01171 PP-loop family DND34_RS10775 PF14437 MafB19-like deaminase DND34_RS10775 PF11734 TilS substrate C-terminal domain DND34_RS10780 PF00999 Sodium/hydrogen exchanger family DND34_RS10795 PF00692 dUTPase DND34_RS10810 PF00331 Glycosyl hydrolase family 10 DND34_RS10810 PF07859 alpha/beta hydrolase fold DND34_RS10820 PF08032 RNA 2'-O ribose methyltransferase substrate binding DND34_RS10820 PF00588 SpoU rRNA Methylase family DND34_RS10845 PF00746 LPXTG cell wall anchor motif DND34_RS10845 PF04650 YSIRK type signal peptide DND34_RS10845 PF17961 Bacterial Ig domain DND34_RS10845 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DND34_RS10845 PF17210 SdrD B-like domain DND34_RS10860 PF17912 MalK OB fold domain DND34_RS10860 PF00005 ABC transporter DND34_RS10865 PF00535 Glycosyl transferase family 2 DND34_RS10870 PF00268 Ribonucleotide reductase, small chain DND34_RS10875 PF00317 Ribonucleotide reductase, all-alpha domain DND34_RS10875 PF08343 Ribonucleotide reductase N-terminal DND34_RS10875 PF02867 Ribonucleotide reductase, barrel domain DND34_RS10880 PF07972 NrdI Flavodoxin like DND34_RS10900 PF07885 Ion channel DND34_RS10900 PF00027 Cyclic nucleotide-binding domain DND34_RS10915 PF14310 Fibronectin type III-like domain DND34_RS10915 PF01915 Glycosyl hydrolase family 3 C-terminal domain DND34_RS10915 PF00933 Glycosyl hydrolase family 3 N terminal domain DND34_RS10920 PF00069 Protein kinase domain DND34_RS10920 PF00400 WD domain, G-beta repeat DND34_RS10935 PF03990 G5-linked-Ubiquitin-like domain DND34_RS10935 PF07501 G5 domain DND34_RS10935 PF06737 Transglycosylase-like domain DND34_RS10940 PF00398 Ribosomal RNA adenine dimethylase DND34_RS10945 PF08544 GHMP kinases C terminal DND34_RS10945 PF00288 GHMP kinases N terminal domain DND34_RS10955 PF01743 Poly A polymerase head domain DND34_RS10955 PF12627 Probable RNA and SrmB- binding site of polymerase A DND34_RS10955 PF13735 tRNA nucleotidyltransferase domain 2 putative DND34_RS10960 PF00293 NUDIX domain DND34_RS10975 PF07992 Pyridine nucleotide-disulphide oxidoreductase DND34_RS10980 PF17762 HTH domain found in ParB protein DND34_RS10980 PF02195 ParB-like nuclease domain DND34_RS10985 PF13614 AAA domain DND34_RS10990 PF02527 rRNA small subunit methyltransferase G DND34_RS11000 PF02096 60Kd inner membrane protein DND34_RS11005 PF01809 Putative membrane protein insertion efficiency factor DND34_RS11010 PF00825 Ribonuclease P DND34_RS11015 PF00468 Ribosomal protein L34