locus-tag	class	description
PMF13cell1_RS00020	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMF13cell1_RS00135	COG3646	Phage regulatory protein
PMF13cell1_RS00135	COG3645	SOS response
PMF13cell1_RS00190	COG1609	Transcriptional regulator
PMF13cell1_RS00195	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
PMF13cell1_RS00195	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PMF13cell1_RS00215	COG2508	Transcriptional regulator
PMF13cell1_RS00220	COG2088	sporulation resulting in formation of a cellular spore
PMF13cell1_RS00225	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PMF13cell1_RS00230	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PMF13cell1_RS00235	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
PMF13cell1_RS00260	COG1175	transmembrane transport
PMF13cell1_RS00270	COG4753	response regulator
PMF13cell1_RS00270	COG2207	Transcriptional regulator
PMF13cell1_RS00275	COG2972	Histidine kinase
PMF13cell1_RS00285	COG4717	serine-type aminopeptidase activity
PMF13cell1_RS00290	COG0420	3'-5' exonuclease activity
PMF13cell1_RS00295	COG0017	Asparaginyl-tRNA synthetase
PMF13cell1_RS00310	COG0445	tRNA wobble uridine modification
PMF13cell1_RS00315	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS00330	COG4753	response regulator
PMF13cell1_RS00330	COG2207	Transcriptional regulator
PMF13cell1_RS00335	COG2972	Histidine kinase
PMF13cell1_RS00380	COG0768	penicillin binding
PMF13cell1_RS00385	COG0544	peptidyl-prolyl cis-trans isomerase activity
PMF13cell1_RS00400	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
PMF13cell1_RS00415	COG0697	spore germination
PMF13cell1_RS00420	COG1802	Transcriptional regulator
PMF13cell1_RS00425	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PMF13cell1_RS00440	COG0534	Mate efflux family protein
PMF13cell1_RS00450	COG0534	Mate efflux family protein
PMF13cell1_RS00455	COG3328	transposase activity
PMF13cell1_RS00500	COG1476	TRANSCRIPTIONal
PMF13cell1_RS00600	COG0551	DNA topoisomerase type I activity
PMF13cell1_RS00600	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PMF13cell1_RS00615	COG0791	NLP P60 protein
PMF13cell1_RS00615	COG0741	lytic transglycosylase activity
PMF13cell1_RS00665	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS00670	COG0582	viral genome integration into host DNA
PMF13cell1_RS00675	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS00745	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS00750	COG0582	viral genome integration into host DNA
PMF13cell1_RS00765	COG4372	Transposase
PMF13cell1_RS00780	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
PMF13cell1_RS00800	COG0463	Glycosyl transferase, family 2
PMF13cell1_RS00800	COG1216	Glycosyl transferase, family 2
PMF13cell1_RS00815	COG0438	transferase activity, transferring glycosyl groups
PMF13cell1_RS00830	COG1215	transferase activity, transferring glycosyl groups
PMF13cell1_RS00840	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PMF13cell1_RS00845	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PMF13cell1_RS00860	COG0582	viral genome integration into host DNA
PMF13cell1_RS00865	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PMF13cell1_RS00875	COG2207	Transcriptional regulator
PMF13cell1_RS00890	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PMF13cell1_RS00900	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
PMF13cell1_RS00900	COG0116	Belongs to the methyltransferase superfamily
PMF13cell1_RS00935	COG0642	Histidine kinase
PMF13cell1_RS00950	COG0252	asparaginase activity
PMF13cell1_RS00970	COG3250	beta-galactosidase activity
PMF13cell1_RS00975	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS00980	COG1175	transmembrane transport
PMF13cell1_RS00995	COG2972	Histidine kinase
PMF13cell1_RS01000	COG2197	response regulator
PMF13cell1_RS01020	COG3426	butyrate kinase activity
PMF13cell1_RS01035	COG0657	acetylesterase activity
PMF13cell1_RS01055	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS01075	COG0457	Tetratricopeptide repeat
PMF13cell1_RS01080	COG1966	Carbon starvation protein
PMF13cell1_RS01095	COG1151	hydroxylamine reductase activity
PMF13cell1_RS01110	COG1509	lysine 2,3-aminomutase activity
PMF13cell1_RS01125	COG0789	Transcriptional regulator
PMF13cell1_RS01135	COG0191	fructose-bisphosphate aldolase activity
PMF13cell1_RS01140	COG0205	6-phosphofructokinase activity
PMF13cell1_RS01145	COG0698	ribose 5-phosphate isomerase
PMF13cell1_RS01150	COG2186	Transcriptional regulator
PMF13cell1_RS01155	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS01160	COG3958	Transketolase
PMF13cell1_RS01165	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PMF13cell1_RS01175	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PMF13cell1_RS01180	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PMF13cell1_RS01190	COG1595	DNA-templated transcription, initiation
PMF13cell1_RS01200	COG1136	(ABC) transporter
PMF13cell1_RS01200	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS01210	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS01220	COG3655	Transcriptional regulator
PMF13cell1_RS01260	COG1609	Transcriptional regulator
PMF13cell1_RS01275	COG0534	Mate efflux family protein
PMF13cell1_RS01280	COG1653	transport
PMF13cell1_RS01285	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS01295	COG3250	beta-galactosidase activity
PMF13cell1_RS01300	COG1609	Transcriptional regulator
PMF13cell1_RS01305	COG2222	sugar isomerase
PMF13cell1_RS01320	COG2188	Transcriptional regulator
PMF13cell1_RS01345	COG1695	Transcriptional regulator
PMF13cell1_RS01350	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS01350	COG2207	Transcriptional regulator
PMF13cell1_RS01355	COG0534	Mate efflux family protein
PMF13cell1_RS01360	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS01375	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS01380	COG4209	transmembrane transport
PMF13cell1_RS01390	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS01395	COG5002	protein histidine kinase activity
PMF13cell1_RS01400	COG0519	Catalyzes the synthesis of GMP from XMP
PMF13cell1_RS01425	COG1136	(ABC) transporter
PMF13cell1_RS01445	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS01445	COG1136	(ABC) transporter
PMF13cell1_RS01450	COG5002	protein histidine kinase activity
PMF13cell1_RS01455	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS01470	COG1193	negative regulation of DNA recombination
PMF13cell1_RS01540	COG2274	protein secretion by the type I secretion system
PMF13cell1_RS01555	COG2208	phosphoserine phosphatase activity
PMF13cell1_RS01570	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PMF13cell1_RS01575	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PMF13cell1_RS01580	COG0049	tRNA binding
PMF13cell1_RS01585	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PMF13cell1_RS01590	COG1472	Belongs to the glycosyl hydrolase 3 family
PMF13cell1_RS01595	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMF13cell1_RS01600	COG0085	RNA polymerase activity
PMF13cell1_RS01630	COG5012	cobalamin binding
PMF13cell1_RS01655	COG1653	transport
PMF13cell1_RS01660	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS01665	COG4209	transmembrane transport
PMF13cell1_RS01675	COG2972	Histidine kinase
PMF13cell1_RS01685	COG0222	ribosome binding
PMF13cell1_RS01705	COG3858	chitin binding
PMF13cell1_RS01705	COG1388	LysM domain
PMF13cell1_RS01715	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS01730	COG3290	protein histidine kinase activity
PMF13cell1_RS01735	COG1501	Belongs to the glycosyl hydrolase 31 family
PMF13cell1_RS01740	COG0641	radical SAM
PMF13cell1_RS01750	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS01755	COG1175	transmembrane transport
PMF13cell1_RS01760	COG1653	transport
PMF13cell1_RS01765	COG1609	Transcriptional regulator
PMF13cell1_RS01775	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS01780	COG0582	viral genome integration into host DNA
PMF13cell1_RS01785	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS01805	COG0081	regulation of translation
PMF13cell1_RS01815	COG0250	Participates in transcription elongation, termination and antitermination
PMF13cell1_RS01825	COG0267	Belongs to the bacterial ribosomal protein bL33 family
PMF13cell1_RS01850	COG1136	(ABC) transporter
PMF13cell1_RS01860	COG1073	alpha beta
PMF13cell1_RS01865	COG2723	6-phospho-beta-galactosidase activity
PMF13cell1_RS01880	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS01890	COG1175	transmembrane transport
PMF13cell1_RS01895	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS01905	COG0346	lactoylglutathione lyase activity
PMF13cell1_RS01910	COG2207	Transcriptional regulator
PMF13cell1_RS01910	COG3708	Transcriptional regulator
PMF13cell1_RS01915	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
PMF13cell1_RS01920	COG4608	Belongs to the ABC transporter superfamily
PMF13cell1_RS01925	COG0444	Belongs to the ABC transporter superfamily
PMF13cell1_RS01935	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMF13cell1_RS01940	COG0601	transmembrane transport
PMF13cell1_RS01945	COG0747	negative chemotaxis
PMF13cell1_RS01990	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS01990	COG1136	(ABC) transporter
PMF13cell1_RS01995	COG2205	protein histidine kinase activity
PMF13cell1_RS02000	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS02010	COG2207	Transcriptional regulator
PMF13cell1_RS02020	COG2205	protein histidine kinase activity
PMF13cell1_RS02035	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS02040	COG2207	Transcriptional regulator
PMF13cell1_RS02065	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMF13cell1_RS02065	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMF13cell1_RS02125	COG0039	L-malate dehydrogenase activity
PMF13cell1_RS02140	COG0148	phosphopyruvate hydratase activity
PMF13cell1_RS02155	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS02195	COG0582	viral genome integration into host DNA
PMF13cell1_RS02200	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS02230	COG0701	Predicted permease
PMF13cell1_RS02270	COG3290	protein histidine kinase activity
PMF13cell1_RS02270	COG0840	transmembrane signaling receptor activity
PMF13cell1_RS02275	COG0840	transmembrane signaling receptor activity
PMF13cell1_RS02275	COG3290	protein histidine kinase activity
PMF13cell1_RS02295	COG2033	superoxide reductase activity
PMF13cell1_RS02305	COG1528	Iron-storage protein
PMF13cell1_RS02310	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PMF13cell1_RS02310	COG1773	rubredoxin
PMF13cell1_RS02370	COG4372	Transposase
PMF13cell1_RS02390	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMF13cell1_RS02435	COG1192	Involved in chromosome partitioning
PMF13cell1_RS02460	COG0500	methyltransferase
PMF13cell1_RS02480	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMF13cell1_RS02480	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMF13cell1_RS02495	COG4176	ABC-type proline glycine betaine transport system permease component
PMF13cell1_RS02505	COG0534	Mate efflux family protein
PMF13cell1_RS02525	COG3328	transposase activity
PMF13cell1_RS02530	COG1151	hydroxylamine reductase activity
PMF13cell1_RS02535	COG1773	rubredoxin
PMF13cell1_RS02555	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PMF13cell1_RS02590	COG1151	hydroxylamine reductase activity
PMF13cell1_RS02615	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PMF13cell1_RS02635	COG0732	type I restriction modification DNA specificity domain
PMF13cell1_RS02645	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS02650	COG0582	viral genome integration into host DNA
PMF13cell1_RS02670	COG1192	Involved in chromosome partitioning
PMF13cell1_RS02690	COG3328	transposase activity
PMF13cell1_RS02760	COG2197	response regulator
PMF13cell1_RS02820	COG1192	Involved in chromosome partitioning
PMF13cell1_RS02845	COG0701	Predicted permease
PMF13cell1_RS02865	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
PMF13cell1_RS02870	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
PMF13cell1_RS02875	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMF13cell1_RS02890	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
PMF13cell1_RS02890	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
PMF13cell1_RS02915	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS02915	COG1136	(ABC) transporter
PMF13cell1_RS02920	COG2252	PERMEase
PMF13cell1_RS02925	COG2205	protein histidine kinase activity
PMF13cell1_RS02930	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS02940	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMF13cell1_RS02945	COG0569	domain protein
PMF13cell1_RS02950	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PMF13cell1_RS02965	COG0500	methyltransferase
PMF13cell1_RS02970	COG2996	Protein conserved in bacteria
PMF13cell1_RS02985	COG0166	Belongs to the GPI family
PMF13cell1_RS02990	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMF13cell1_RS02995	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PMF13cell1_RS03005	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PMF13cell1_RS03015	COG1830	Aldolase
PMF13cell1_RS03020	COG1063	alcohol dehydrogenase
PMF13cell1_RS03025	COG1737	Transcriptional regulator
PMF13cell1_RS03030	COG2198	Histidine kinase
PMF13cell1_RS03030	COG2205	protein histidine kinase activity
PMF13cell1_RS03030	COG0784	Response regulator, receiver
PMF13cell1_RS03035	COG1876	peptidase activity
PMF13cell1_RS03040	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMF13cell1_RS03045	COG2002	toxin-antitoxin pair type II binding
PMF13cell1_RS03055	COG4750	Nucleotidyl transferase
PMF13cell1_RS03060	COG1213	nucleotidyl transferase
PMF13cell1_RS03070	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
PMF13cell1_RS03080	COG1486	melibiose metabolic process
PMF13cell1_RS03085	COG2207	Transcriptional regulator
PMF13cell1_RS03095	COG1063	alcohol dehydrogenase
PMF13cell1_RS03105	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS03110	COG1175	transmembrane transport
PMF13cell1_RS03120	COG0561	phosphatase activity
PMF13cell1_RS03140	COG1486	melibiose metabolic process
PMF13cell1_RS03150	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PMF13cell1_RS03205	COG1116	anion transmembrane transporter activity
PMF13cell1_RS03210	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PMF13cell1_RS03215	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PMF13cell1_RS03215	COG1116	anion transmembrane transporter activity
PMF13cell1_RS03220	COG1151	hydroxylamine reductase activity
PMF13cell1_RS03250	COG4221	oxidoreductase activity
PMF13cell1_RS03255	COG0789	Transcriptional regulator
PMF13cell1_RS03275	COG1132	(ABC) transporter
PMF13cell1_RS03280	COG1132	(ABC) transporter
PMF13cell1_RS03285	COG1129	ABC transporter
PMF13cell1_RS03300	COG4977	sequence-specific DNA binding
PMF13cell1_RS03315	COG3433	isochorismatase activity
PMF13cell1_RS03315	COG2226	methyltransferase
PMF13cell1_RS03315	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
PMF13cell1_RS03320	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
PMF13cell1_RS03320	COG3433	isochorismatase activity
PMF13cell1_RS03320	COG2226	methyltransferase
PMF13cell1_RS03325	COG1021	2,3-dihydroxybenzoate-AMP ligase
PMF13cell1_RS03330	COG2091	lysine biosynthetic process via aminoadipic acid
PMF13cell1_RS03355	COG0642	Histidine kinase
PMF13cell1_RS03360	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS03390	COG0789	Transcriptional regulator
PMF13cell1_RS03410	COG2249	NAD(P)H dehydrogenase (quinone) activity
PMF13cell1_RS03415	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS03425	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS03430	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS03545	COG0366	Alpha amylase catalytic
PMF13cell1_RS03550	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS03555	COG1175	transmembrane transport
PMF13cell1_RS03565	COG1609	Transcriptional regulator
PMF13cell1_RS03595	COG3958	Transketolase
PMF13cell1_RS03600	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PMF13cell1_RS03610	COG1609	Transcriptional regulator
PMF13cell1_RS03615	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PMF13cell1_RS03620	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PMF13cell1_RS03625	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMF13cell1_RS03630	COG0205	6-phosphofructokinase activity
PMF13cell1_RS03645	COG0586	Pfam SNARE associated Golgi protein
PMF13cell1_RS03650	COG0646	methionine synthase
PMF13cell1_RS03650	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
PMF13cell1_RS03655	COG0590	tRNA wobble adenosine to inosine editing
PMF13cell1_RS03665	COG3409	Peptidoglycan-binding domain 1 protein
PMF13cell1_RS03665	COG5632	N-Acetylmuramoyl-L-alanine amidase
PMF13cell1_RS03670	COG4824	toxin secretion phage lysis holin
PMF13cell1_RS03805	COG4916	TIR domain
PMF13cell1_RS03860	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMF13cell1_RS03920	COG1396	sequence-specific DNA binding
PMF13cell1_RS03940	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS03975	COG0622	Phosphoesterase
PMF13cell1_RS03980	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PMF13cell1_RS03985	COG0116	Belongs to the methyltransferase superfamily
PMF13cell1_RS03990	COG0622	Phosphoesterase
PMF13cell1_RS04015	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
PMF13cell1_RS04020	COG1940	carbohydrate kinase activity
PMF13cell1_RS04035	COG1175	transmembrane transport
PMF13cell1_RS04040	COG1653	transport
PMF13cell1_RS04045	COG1940	carbohydrate kinase activity
PMF13cell1_RS04060	COG0436	Aminotransferase
PMF13cell1_RS04065	COG1132	(ABC) transporter
PMF13cell1_RS04075	COG2116	formate transmembrane transporter activity
PMF13cell1_RS04080	COG2759	Belongs to the formate--tetrahydrofolate ligase family
PMF13cell1_RS04090	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
PMF13cell1_RS04095	COG1696	Membrane protein involved in D-alanine export
PMF13cell1_RS04105	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PMF13cell1_RS04110	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS04115	COG2205	protein histidine kinase activity
PMF13cell1_RS04120	COG0569	domain protein
PMF13cell1_RS04125	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PMF13cell1_RS04130	COG0628	permease
PMF13cell1_RS04135	COG0494	nUDIX hydrolase
PMF13cell1_RS04140	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PMF13cell1_RS04170	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS04175	COG1175	transmembrane transport
PMF13cell1_RS04185	COG2972	Histidine kinase
PMF13cell1_RS04190	COG2207	Transcriptional regulator
PMF13cell1_RS04190	COG4753	response regulator
PMF13cell1_RS04200	COG3964	amidohydrolase
PMF13cell1_RS04215	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS04225	COG1653	transport
PMF13cell1_RS04260	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS04265	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PMF13cell1_RS04330	COG3250	beta-galactosidase activity
PMF13cell1_RS04335	COG0534	Mate efflux family protein
PMF13cell1_RS04340	COG1131	(ABC) transporter
PMF13cell1_RS04380	COG4977	sequence-specific DNA binding
PMF13cell1_RS04395	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS04400	COG4209	transmembrane transport
PMF13cell1_RS04405	COG1609	Transcriptional regulator
PMF13cell1_RS04410	COG4753	response regulator
PMF13cell1_RS04410	COG2207	Transcriptional regulator
PMF13cell1_RS04425	COG0006	proline dipeptidase activity
PMF13cell1_RS04430	COG2183	response to ionizing radiation
PMF13cell1_RS04435	COG1070	Carbohydrate kinase
PMF13cell1_RS04470	COG1131	(ABC) transporter
PMF13cell1_RS04490	COG5002	protein histidine kinase activity
PMF13cell1_RS04490	COG3850	Histidine kinase
PMF13cell1_RS04500	COG1070	Carbohydrate kinase
PMF13cell1_RS04505	COG0747	negative chemotaxis
PMF13cell1_RS04510	COG4608	Belongs to the ABC transporter superfamily
PMF13cell1_RS04515	COG0444	Belongs to the ABC transporter superfamily
PMF13cell1_RS04520	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMF13cell1_RS04540	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS04565	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
PMF13cell1_RS04570	COG0460	homoserine dehydrogenase
PMF13cell1_RS04575	COG4492	Belongs to the UPF0735 family
PMF13cell1_RS04590	COG0653	protein targeting
PMF13cell1_RS04595	COG2188	Transcriptional regulator
PMF13cell1_RS04610	COG2207	Transcriptional regulator
PMF13cell1_RS04610	COG3708	Transcriptional regulator
PMF13cell1_RS04625	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
PMF13cell1_RS04630	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMF13cell1_RS04635	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
PMF13cell1_RS04645	COG1217	gtp-binding protein TYPA
PMF13cell1_RS04650	COG1012	belongs to the aldehyde dehydrogenase family
PMF13cell1_RS04650	COG1454	alcohol dehydrogenase
PMF13cell1_RS04665	COG0726	polysaccharide deacetylase
PMF13cell1_RS04670	COG1115	amino acid carrier protein
PMF13cell1_RS04680	COG1971	Probably functions as a manganese efflux pump
PMF13cell1_RS04700	COG5002	protein histidine kinase activity
PMF13cell1_RS04720	COG1472	Belongs to the glycosyl hydrolase 3 family
PMF13cell1_RS04725	COG2207	Transcriptional regulator
PMF13cell1_RS04725	COG4753	response regulator
PMF13cell1_RS04730	COG2972	Histidine kinase
PMF13cell1_RS04760	COG1131	(ABC) transporter
PMF13cell1_RS04770	COG1595	DNA-templated transcription, initiation
PMF13cell1_RS04790	COG2732	(Barnase) inhibitor
PMF13cell1_RS04795	COG4290	ribonuclease
PMF13cell1_RS04800	COG0561	phosphatase activity
PMF13cell1_RS04810	COG3447	MASE1 domain protein
PMF13cell1_RS04810	COG5002	protein histidine kinase activity
PMF13cell1_RS04810	COG5001	Diguanylate cyclase
PMF13cell1_RS04815	COG2267	carboxylic ester hydrolase activity
PMF13cell1_RS04820	COG2814	Major facilitator Superfamily
PMF13cell1_RS04830	COG1131	(ABC) transporter
PMF13cell1_RS04835	COG1309	transcriptional regulator
PMF13cell1_RS04840	COG0534	Mate efflux family protein
PMF13cell1_RS04850	COG0737	Belongs to the 5'-nucleotidase family
PMF13cell1_RS04870	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS04875	COG1175	transmembrane transport
PMF13cell1_RS04885	COG4753	response regulator
PMF13cell1_RS04885	COG2207	Transcriptional regulator
PMF13cell1_RS04890	COG2972	Histidine kinase
PMF13cell1_RS04905	COG2364	Membrane
PMF13cell1_RS04910	COG0813	purine-nucleoside phosphorylase activity
PMF13cell1_RS04915	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PMF13cell1_RS04920	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PMF13cell1_RS04935	COG2211	Major facilitator Superfamily
PMF13cell1_RS04945	COG2186	Transcriptional regulator
PMF13cell1_RS04950	COG4607	ABC-type enterochelin transport system periplasmic component
PMF13cell1_RS04955	COG4604	ABC transporter, ATP-binding protein
PMF13cell1_RS04960	COG4605	iron ion homeostasis
PMF13cell1_RS04970	COG1733	regulation of RNA biosynthetic process
PMF13cell1_RS04995	COG0582	viral genome integration into host DNA
PMF13cell1_RS05000	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS05050	COG3250	beta-galactosidase activity
PMF13cell1_RS05060	COG2211	Major facilitator Superfamily
PMF13cell1_RS05075	COG4753	response regulator
PMF13cell1_RS05075	COG2207	Transcriptional regulator
PMF13cell1_RS05080	COG3408	Glycogen debranching enzyme
PMF13cell1_RS05105	COG0519	Catalyzes the synthesis of GMP from XMP
PMF13cell1_RS05115	COG1609	Transcriptional regulator
PMF13cell1_RS05125	COG0653	protein targeting
PMF13cell1_RS05135	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
PMF13cell1_RS05140	COG0534	Mate efflux family protein
PMF13cell1_RS05145	COG2706	6-phosphogluconolactonase activity
PMF13cell1_RS05160	COG2223	nitrite transmembrane transporter activity
PMF13cell1_RS05165	COG4978	Transcriptional regulator
PMF13cell1_RS05165	COG0789	Transcriptional regulator
PMF13cell1_RS05170	COG1394	ATPase activity, coupled to movement of substances
PMF13cell1_RS05175	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
PMF13cell1_RS05180	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
PMF13cell1_RS05185	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
PMF13cell1_RS05200	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMF13cell1_RS05205	COG1269	ATP hydrolysis coupled proton transport
PMF13cell1_RS05225	COG0564	pseudouridine synthase activity
PMF13cell1_RS05230	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PMF13cell1_RS05235	COG3835	regulator
PMF13cell1_RS05240	COG3842	ATPase activity
PMF13cell1_RS05245	COG5002	protein histidine kinase activity
PMF13cell1_RS05260	COG0166	Belongs to the GPI family
PMF13cell1_RS05270	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PMF13cell1_RS05275	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMF13cell1_RS05310	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PMF13cell1_RS05320	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PMF13cell1_RS05335	COG0129	dihydroxy-acid dehydratase activity
PMF13cell1_RS05415	COG0829	nickel cation binding
PMF13cell1_RS05425	COG0830	nickel cation binding
PMF13cell1_RS05430	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
PMF13cell1_RS05435	COG0804	urea catabolic process
PMF13cell1_RS05445	COG0831	urea catabolic process
PMF13cell1_RS05455	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PMF13cell1_RS05495	COG4753	response regulator
PMF13cell1_RS05495	COG2207	Transcriptional regulator
PMF13cell1_RS05500	COG5002	protein histidine kinase activity
PMF13cell1_RS05500	COG0784	Response regulator, receiver
PMF13cell1_RS05535	COG1131	(ABC) transporter
PMF13cell1_RS05540	COG4585	Histidine kinase
PMF13cell1_RS05545	COG2197	response regulator
PMF13cell1_RS05595	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PMF13cell1_RS05605	COG0537	adenosine 5'-monophosphoramidase activity
PMF13cell1_RS05610	COG5002	protein histidine kinase activity
PMF13cell1_RS05615	COG0457	Tetratricopeptide repeat
PMF13cell1_RS05615	COG0705	Rhomboid family
PMF13cell1_RS05690	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PMF13cell1_RS05700	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
PMF13cell1_RS05715	COG3594	Acyltransferase
PMF13cell1_RS05720	COG0281	malic enzyme
PMF13cell1_RS05740	COG1175	transmembrane transport
PMF13cell1_RS05750	COG3275	phosphorelay sensor kinase activity
PMF13cell1_RS05755	COG2201	protein-glutamate methylesterase activity
PMF13cell1_RS05760	COG0733	neurotransmitter:sodium symporter activity
PMF13cell1_RS05810	COG0220	tRNA (guanine-N7-)-methyltransferase activity
PMF13cell1_RS05825	COG1269	ATP hydrolysis coupled proton transport
PMF13cell1_RS05855	COG1394	ATPase activity, coupled to movement of substances
PMF13cell1_RS05865	COG0573	inorganic phosphate transmembrane transporter activity
PMF13cell1_RS05870	COG0581	inorganic phosphate transmembrane transporter activity
PMF13cell1_RS05875	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
PMF13cell1_RS05880	COG0704	Plays a role in the regulation of phosphate uptake
PMF13cell1_RS05890	COG5002	protein histidine kinase activity
PMF13cell1_RS05900	COG1695	Transcriptional regulator
PMF13cell1_RS05910	COG0492	ferredoxin-NADP+ reductase activity
PMF13cell1_RS05925	COG1846	Transcriptional regulator
PMF13cell1_RS05930	COG1349	DNA-binding transcription factor activity
PMF13cell1_RS05935	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMF13cell1_RS05940	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
PMF13cell1_RS05945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
PMF13cell1_RS05945	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
PMF13cell1_RS05945	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
PMF13cell1_RS05950	COG1105	Belongs to the carbohydrate kinase PfkB family
PMF13cell1_RS05960	COG4869	propanediol catabolic process
PMF13cell1_RS05970	COG1063	alcohol dehydrogenase
PMF13cell1_RS05975	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS05980	COG1486	melibiose metabolic process
PMF13cell1_RS05985	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS05990	COG1175	transmembrane transport
PMF13cell1_RS06005	COG0140	phosphoribosyl-ATP diphosphatase activity
PMF13cell1_RS06010	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PMF13cell1_RS06015	COG0107	imidazoleglycerol-phosphate synthase activity
PMF13cell1_RS06025	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PMF13cell1_RS06030	COG0131	Imidazoleglycerol-phosphate dehydratase
PMF13cell1_RS06035	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PMF13cell1_RS06040	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
PMF13cell1_RS06045	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PMF13cell1_RS06050	COG2205	protein histidine kinase activity
PMF13cell1_RS06050	COG0784	Response regulator, receiver
PMF13cell1_RS06050	COG2198	Histidine kinase
PMF13cell1_RS06055	COG0700	Nucleoside recognition
PMF13cell1_RS06060	COG0534	Mate efflux family protein
PMF13cell1_RS06075	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS06075	COG4977	sequence-specific DNA binding
PMF13cell1_RS06090	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS06100	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PMF13cell1_RS06115	COG0523	cobalamin synthesis protein
PMF13cell1_RS06130	COG1136	(ABC) transporter
PMF13cell1_RS06140	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS06145	COG1757	Na H antiporter
PMF13cell1_RS06155	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PMF13cell1_RS06180	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PMF13cell1_RS06190	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
PMF13cell1_RS06195	COG2022	thiamine diphosphate biosynthetic process
PMF13cell1_RS06205	COG0352	thiamine-phosphate diphosphorylase activity
PMF13cell1_RS06300	COG0515	serine threonine protein kinase
PMF13cell1_RS06300	COG2815	serine threonine protein kinase
PMF13cell1_RS06325	COG0631	protein serine/threonine phosphatase activity
PMF13cell1_RS06330	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PMF13cell1_RS06345	COG1309	transcriptional regulator
PMF13cell1_RS06350	COG0084	hydrolase, TatD family'
PMF13cell1_RS06355	COG0628	permease
PMF13cell1_RS06360	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
PMF13cell1_RS06365	COG2365	Tyrosine phosphatase family
PMF13cell1_RS06380	COG0363	glucosamine-6-phosphate deaminase activity
PMF13cell1_RS06385	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS06390	COG1175	transmembrane transport
PMF13cell1_RS06400	COG2971	BadF BadG BcrA BcrD
PMF13cell1_RS06405	COG1486	melibiose metabolic process
PMF13cell1_RS06440	COG2211	Major facilitator Superfamily
PMF13cell1_RS06445	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS06450	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS06455	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS06460	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS06460	COG2207	Transcriptional regulator
PMF13cell1_RS06480	COG3345	alpha-galactosidase
PMF13cell1_RS06485	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS06490	COG1175	transmembrane transport
PMF13cell1_RS06500	COG2207	Transcriptional regulator
PMF13cell1_RS06500	COG4753	response regulator
PMF13cell1_RS06505	COG2972	Histidine kinase
PMF13cell1_RS06515	COG3706	GGDEF domain
PMF13cell1_RS06535	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PMF13cell1_RS06540	COG2188	Transcriptional regulator
PMF13cell1_RS06555	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS06570	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
PMF13cell1_RS06575	COG1874	Beta-galactosidase
PMF13cell1_RS06580	COG2972	Histidine kinase
PMF13cell1_RS06585	COG4753	response regulator
PMF13cell1_RS06585	COG2207	Transcriptional regulator
PMF13cell1_RS06590	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS06600	COG1653	transport
PMF13cell1_RS06615	COG0534	Mate efflux family protein
PMF13cell1_RS06625	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS06630	COG1175	transmembrane transport
PMF13cell1_RS06635	COG1653	transport
PMF13cell1_RS06640	COG4977	sequence-specific DNA binding
PMF13cell1_RS06645	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS06650	COG2972	Histidine kinase
PMF13cell1_RS06655	COG0069	glutamate synthase activity
PMF13cell1_RS06680	COG0149	triose-phosphate isomerase activity
PMF13cell1_RS06695	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
PMF13cell1_RS06700	COG1063	alcohol dehydrogenase
PMF13cell1_RS06705	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PMF13cell1_RS06710	COG3959	Transketolase, thiamine diphosphate binding domain
PMF13cell1_RS06715	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS06730	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PMF13cell1_RS06735	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PMF13cell1_RS06745	COG1609	Transcriptional regulator
PMF13cell1_RS06750	COG1609	Transcriptional regulator
PMF13cell1_RS06755	COG2715	membrane protein required for spore maturation
PMF13cell1_RS06760	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PMF13cell1_RS06765	COG2843	Capsule synthesis protein
PMF13cell1_RS06770	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PMF13cell1_RS06775	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PMF13cell1_RS06780	COG1774	PSP1 C-terminal conserved region
PMF13cell1_RS06790	COG0194	GDP metabolic process
PMF13cell1_RS06795	COG1982	Orn Lys Arg decarboxylase major
PMF13cell1_RS06800	COG0442	prolyl-tRNA aminoacylation
PMF13cell1_RS06815	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS06820	COG5002	protein histidine kinase activity
PMF13cell1_RS06835	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PMF13cell1_RS06845	COG0129	dihydroxy-acid dehydratase activity
PMF13cell1_RS06855	COG2610	gluconate transmembrane transporter activity
PMF13cell1_RS06865	COG1063	alcohol dehydrogenase
PMF13cell1_RS06880	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS06885	COG1175	transmembrane transport
PMF13cell1_RS06905	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS06910	COG0582	viral genome integration into host DNA
PMF13cell1_RS06915	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS06945	COG4509	Sortase family
PMF13cell1_RS06955	COG1122	ATPase activity
PMF13cell1_RS06995	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMF13cell1_RS07000	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PMF13cell1_RS07005	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PMF13cell1_RS07035	COG2357	RelA SpoT domain protein
PMF13cell1_RS07050	COG2211	Major facilitator Superfamily
PMF13cell1_RS07055	COG3250	beta-galactosidase activity
PMF13cell1_RS07060	COG4977	sequence-specific DNA binding
PMF13cell1_RS07065	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
PMF13cell1_RS07065	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PMF13cell1_RS07085	COG3842	ATPase activity
PMF13cell1_RS07090	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
PMF13cell1_RS07095	COG1418	mRNA catabolic process
PMF13cell1_RS07100	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PMF13cell1_RS07115	COG2195	Cleaves the N-terminal amino acid of tripeptides
PMF13cell1_RS07120	COG1288	antiporter activity
PMF13cell1_RS07125	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS07130	COG0058	SHG alpha-glucan phosphorylase activity
PMF13cell1_RS07135	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PMF13cell1_RS07150	COG1131	(ABC) transporter
PMF13cell1_RS07160	COG1686	Belongs to the peptidase S11 family
PMF13cell1_RS07165	COG2176	DNA-directed DNA polymerase activity
PMF13cell1_RS07175	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMF13cell1_RS07180	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PMF13cell1_RS07185	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PMF13cell1_RS07200	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMF13cell1_RS07205	COG0017	Asparaginyl-tRNA synthetase
PMF13cell1_RS07210	COG0436	Aminotransferase
PMF13cell1_RS07250	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PMF13cell1_RS07265	COG1459	type II secretion system
PMF13cell1_RS07335	COG1131	(ABC) transporter
PMF13cell1_RS07355	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS07375	COG1396	sequence-specific DNA binding
PMF13cell1_RS07375	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS07405	COG0493	'glutamate synthase
PMF13cell1_RS07410	COG0067	glutamate synthase
PMF13cell1_RS07410	COG0069	glutamate synthase activity
PMF13cell1_RS07410	COG0070	glutamate synthase
PMF13cell1_RS07415	COG0504	CTP synthase activity
PMF13cell1_RS07430	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PMF13cell1_RS07435	COG0004	ammonium transporteR
PMF13cell1_RS07455	COG1960	acyl-CoA dehydrogenase activity
PMF13cell1_RS07460	COG1250	3-hydroxyacyl-CoA dehydrogenase
PMF13cell1_RS07465	COG1024	Enoyl-CoA hydratase
PMF13cell1_RS07470	COG0183	Belongs to the thiolase family
PMF13cell1_RS07480	COG2721	sulfolactate sulfo-lyase activity
PMF13cell1_RS07495	COG1063	alcohol dehydrogenase
PMF13cell1_RS07505	COG0698	ribose 5-phosphate isomerase
PMF13cell1_RS07515	COG2376	Dihydroxyacetone kinase
PMF13cell1_RS07530	COG0473	3-isopropylmalate dehydrogenase activity
PMF13cell1_RS07530	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
PMF13cell1_RS07545	COG1653	transport
PMF13cell1_RS07555	COG2197	response regulator
PMF13cell1_RS07560	COG2972	Histidine kinase
PMF13cell1_RS07565	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PMF13cell1_RS07570	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PMF13cell1_RS07600	COG2271	Major facilitator Superfamily
PMF13cell1_RS07605	COG2186	Transcriptional regulator
PMF13cell1_RS07625	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS07640	COG4753	response regulator
PMF13cell1_RS07640	COG2207	Transcriptional regulator
PMF13cell1_RS07645	COG2972	Histidine kinase
PMF13cell1_RS07660	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMF13cell1_RS07670	COG1475	DNA binding
PMF13cell1_RS07675	COG1192	Involved in chromosome partitioning
PMF13cell1_RS07700	COG1131	(ABC) transporter
PMF13cell1_RS07725	COG0357	Ribosomal RNA small subunit methyltransferase G
PMF13cell1_RS07730	COG0445	tRNA wobble uridine modification
PMF13cell1_RS07735	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PMF13cell1_RS07740	COG1847	R3H domain protein
PMF13cell1_RS07745	COG0706	membrane insertase activity
PMF13cell1_RS07755	COG0594	ribonuclease P activity
PMF13cell1_RS07765	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PMF13cell1_RS07770	COG0592	DNA-directed DNA polymerase activity
PMF13cell1_RS07780	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PMF13cell1_RS07785	COG0187	DNA topoisomerase II activity
PMF13cell1_RS07790	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMF13cell1_RS07875	COG0534	Mate efflux family protein
PMF13cell1_RS07885	COG2873	o-acetylhomoserine
PMF13cell1_RS07925	COG2972	Histidine kinase
PMF13cell1_RS07930	COG4753	response regulator
PMF13cell1_RS07930	COG2207	Transcriptional regulator
PMF13cell1_RS07940	COG1175	transmembrane transport
PMF13cell1_RS07945	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS07950	COG1472	Belongs to the glycosyl hydrolase 3 family
PMF13cell1_RS07955	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS07960	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PMF13cell1_RS07965	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PMF13cell1_RS07970	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMF13cell1_RS07975	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PMF13cell1_RS07980	COG2731	YhcH YjgK YiaL family protein
PMF13cell1_RS07990	COG1737	Transcriptional regulator
PMF13cell1_RS07995	COG0735	belongs to the Fur family
PMF13cell1_RS08000	COG1773	rubredoxin
PMF13cell1_RS08000	COG1592	Rubrerythrin
PMF13cell1_RS08005	COG1592	Rubrerythrin
PMF13cell1_RS08015	COG0534	Mate efflux family protein
PMF13cell1_RS08035	COG0363	glucosamine-6-phosphate deaminase activity
PMF13cell1_RS08040	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PMF13cell1_RS08045	COG1940	carbohydrate kinase activity
PMF13cell1_RS08045	COG1846	Transcriptional regulator
PMF13cell1_RS08050	COG1940	carbohydrate kinase activity
PMF13cell1_RS08080	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PMF13cell1_RS08085	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS08110	COG5012	cobalamin binding
PMF13cell1_RS08130	COG5012	cobalamin binding
PMF13cell1_RS08155	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS08160	COG0366	Alpha amylase catalytic
PMF13cell1_RS08170	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS08180	COG1940	carbohydrate kinase activity
PMF13cell1_RS08190	COG1653	transport
PMF13cell1_RS08195	COG1175	transmembrane transport
PMF13cell1_RS08220	COG1175	transmembrane transport
PMF13cell1_RS08225	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS08235	COG2207	Transcriptional regulator
PMF13cell1_RS08245	COG1131	(ABC) transporter
PMF13cell1_RS08285	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS08290	COG2205	protein histidine kinase activity
PMF13cell1_RS08295	COG0039	L-malate dehydrogenase activity
PMF13cell1_RS08310	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
PMF13cell1_RS08340	COG1053	succinate dehydrogenase
PMF13cell1_RS08345	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
PMF13cell1_RS08360	COG2801	Transposase and inactivated derivatives
PMF13cell1_RS08405	COG4209	transmembrane transport
PMF13cell1_RS08410	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS08430	COG1874	Beta-galactosidase
PMF13cell1_RS08435	COG1501	Belongs to the glycosyl hydrolase 31 family
PMF13cell1_RS08440	COG3275	phosphorelay sensor kinase activity
PMF13cell1_RS08465	COG3959	Transketolase, thiamine diphosphate binding domain
PMF13cell1_RS08470	COG3958	Transketolase
PMF13cell1_RS08475	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMF13cell1_RS08480	COG3250	beta-galactosidase activity
PMF13cell1_RS08485	COG1063	alcohol dehydrogenase
PMF13cell1_RS08490	COG0656	L-ascorbic acid biosynthetic process
PMF13cell1_RS08495	COG2207	Transcriptional regulator
PMF13cell1_RS08505	COG4209	transmembrane transport
PMF13cell1_RS08510	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS08555	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PMF13cell1_RS08580	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PMF13cell1_RS08590	COG0789	Transcriptional regulator
PMF13cell1_RS08595	COG3300	MHYT domain
PMF13cell1_RS08595	COG5001	Diguanylate cyclase
PMF13cell1_RS08615	COG0246	Mannitol dehydrogenase
PMF13cell1_RS08620	COG1312	Catalyzes the dehydration of D-mannonate
PMF13cell1_RS08625	COG2207	Transcriptional regulator
PMF13cell1_RS08640	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS08645	COG2855	membrane
PMF13cell1_RS08655	COG1528	Iron-storage protein
PMF13cell1_RS08665	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMF13cell1_RS08680	COG1511	domain protein
PMF13cell1_RS08710	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PMF13cell1_RS08720	COG1994	Peptidase M50
PMF13cell1_RS08735	COG0179	Fumarylacetoacetate (FAA) hydrolase
PMF13cell1_RS08760	COG3940	Belongs to the glycosyl hydrolase 43 family
PMF13cell1_RS08775	COG1653	transport
PMF13cell1_RS08780	COG1175	transmembrane transport
PMF13cell1_RS08785	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS08790	COG3534	alpha-L-arabinofuranosidase
PMF13cell1_RS08795	COG0534	Mate efflux family protein
PMF13cell1_RS08805	COG1691	(AIR) carboxylase
PMF13cell1_RS08815	COG0534	Mate efflux family protein
PMF13cell1_RS08830	COG2080	2 iron, 2 sulfur cluster binding
PMF13cell1_RS08835	COG1529	Aldehyde oxidase and xanthine dehydrogenase
PMF13cell1_RS08835	COG2080	2 iron, 2 sulfur cluster binding
PMF13cell1_RS08840	COG0531	amino acid
PMF13cell1_RS08845	COG1362	aminopeptidase activity
PMF13cell1_RS08880	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PMF13cell1_RS08885	COG0531	amino acid
PMF13cell1_RS08900	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PMF13cell1_RS08905	COG0437	4 iron, 4 sulfur cluster binding
PMF13cell1_RS08905	COG3064	Membrane
PMF13cell1_RS08920	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PMF13cell1_RS08925	COG0791	NLP P60 protein
PMF13cell1_RS08940	COG0426	domain, Protein
PMF13cell1_RS08945	COG0546	phosphoglycolate phosphatase activity
PMF13cell1_RS08950	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS08955	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
PMF13cell1_RS08955	COG0517	IMP dehydrogenase activity
PMF13cell1_RS09005	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS09015	COG1136	(ABC) transporter
PMF13cell1_RS09025	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PMF13cell1_RS09040	COG2182	Extracellular solute-binding protein
PMF13cell1_RS09045	COG4209	transmembrane transport
PMF13cell1_RS09050	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS09055	COG3275	phosphorelay sensor kinase activity
PMF13cell1_RS09080	COG4106	trans-aconitate 2-methyltransferase activity
PMF13cell1_RS09085	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PMF13cell1_RS09090	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
PMF13cell1_RS09090	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PMF13cell1_RS09115	COG1609	Transcriptional regulator
PMF13cell1_RS09135	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS09140	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PMF13cell1_RS09145	COG3408	Glycogen debranching enzyme
PMF13cell1_RS09150	COG0129	dihydroxy-acid dehydratase activity
PMF13cell1_RS09160	COG2972	Histidine kinase
PMF13cell1_RS09165	COG2207	Transcriptional regulator
PMF13cell1_RS09165	COG4753	response regulator
PMF13cell1_RS09180	COG1175	transmembrane transport
PMF13cell1_RS09200	COG0561	phosphatase activity
PMF13cell1_RS09205	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
PMF13cell1_RS09210	COG1074	ATP-dependent DNA helicase activity
PMF13cell1_RS09220	COG1115	amino acid carrier protein
PMF13cell1_RS09225	COG2169	Transcriptional regulator
PMF13cell1_RS09235	COG0601	transmembrane transport
PMF13cell1_RS09240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMF13cell1_RS09245	COG0444	Belongs to the ABC transporter superfamily
PMF13cell1_RS09250	COG4608	Belongs to the ABC transporter superfamily
PMF13cell1_RS09265	COG2972	Histidine kinase
PMF13cell1_RS09275	COG1132	(ABC) transporter
PMF13cell1_RS09300	COG1983	PspC domain protein
PMF13cell1_RS09305	COG2340	Cysteine-rich secretory protein family
PMF13cell1_RS09360	COG2378	regulation of single-species biofilm formation
PMF13cell1_RS09400	COG3835	regulator
PMF13cell1_RS09420	COG2972	Histidine kinase
PMF13cell1_RS09425	COG2207	Transcriptional regulator
PMF13cell1_RS09425	COG4753	response regulator
PMF13cell1_RS09435	COG2207	Transcriptional regulator
PMF13cell1_RS09440	COG2972	Histidine kinase
PMF13cell1_RS09455	COG1796	DNA polymerase
PMF13cell1_RS09455	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
PMF13cell1_RS09465	COG4209	transmembrane transport
PMF13cell1_RS09470	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMF13cell1_RS09475	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS09480	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMF13cell1_RS09485	COG1486	melibiose metabolic process
PMF13cell1_RS09495	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PMF13cell1_RS09535	COG4209	transmembrane transport
PMF13cell1_RS09540	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS09545	COG1653	transport
PMF13cell1_RS09555	COG3250	beta-galactosidase activity
PMF13cell1_RS09560	COG2357	RelA SpoT domain protein
PMF13cell1_RS09580	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
PMF13cell1_RS09585	COG0812	UDP-N-acetylmuramate dehydrogenase activity
PMF13cell1_RS09595	COG1481	regulation of sporulation
PMF13cell1_RS09600	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
PMF13cell1_RS09610	COG2160	L-arabinose isomerase activity
PMF13cell1_RS09645	COG2972	Histidine kinase
PMF13cell1_RS09660	COG1653	transport
PMF13cell1_RS09665	COG1175	transmembrane transport
PMF13cell1_RS09670	COG3833	ABC-type maltose transport systems, permease component
PMF13cell1_RS09675	COG0383	alpha-mannosidase activity
PMF13cell1_RS09680	COG1362	aminopeptidase activity
PMF13cell1_RS09700	COG0039	L-malate dehydrogenase activity
PMF13cell1_RS09705	COG0281	malic enzyme
PMF13cell1_RS09710	COG0051	transcription antitermination factor activity, RNA binding
PMF13cell1_RS09715	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PMF13cell1_RS09730	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PMF13cell1_RS09740	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PMF13cell1_RS09750	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PMF13cell1_RS09755	COG0255	Belongs to the universal ribosomal protein uL29 family
PMF13cell1_RS09760	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PMF13cell1_RS09780	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMF13cell1_RS09785	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PMF13cell1_RS09790	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PMF13cell1_RS09800	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PMF13cell1_RS09810	COG0200	Binds to the 23S rRNA
PMF13cell1_RS09820	COG0563	adenylate kinase activity
PMF13cell1_RS09835	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PMF13cell1_RS09845	COG0257	Belongs to the bacterial ribosomal protein bL36 family
PMF13cell1_RS09850	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PMF13cell1_RS09855	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PMF13cell1_RS09860	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PMF13cell1_RS09865	COG0202	RNA polymerase activity
PMF13cell1_RS09870	COG0203	ribosomal protein L17
PMF13cell1_RS09875	COG1597	lipid kinase activity
PMF13cell1_RS09900	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMF13cell1_RS09910	COG4804	nuclease activity
PMF13cell1_RS09955	COG0840	transmembrane signaling receptor activity
PMF13cell1_RS09970	COG2205	protein histidine kinase activity
PMF13cell1_RS09970	COG0784	Response regulator, receiver
PMF13cell1_RS09980	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PMF13cell1_RS09985	COG2199	diguanylate cyclase activity
PMF13cell1_RS09985	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
PMF13cell1_RS10000	COG0714	Associated with various cellular activities
PMF13cell1_RS10005	COG1073	alpha beta
PMF13cell1_RS10015	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMF13cell1_RS10020	COG3835	regulator
PMF13cell1_RS10025	COG2884	Cell division ATP-binding protein ftsE
PMF13cell1_RS10030	COG2177	Part of the ABC transporter FtsEX involved in
PMF13cell1_RS10045	COG3437	response regulator, receiver
PMF13cell1_RS10055	COG1070	Carbohydrate kinase
PMF13cell1_RS10060	COG4806	L-rhamnose isomerase
PMF13cell1_RS10065	COG0235	Class ii aldolase
PMF13cell1_RS10070	COG2169	Transcriptional regulator
PMF13cell1_RS10085	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS10090	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS10100	COG5002	protein histidine kinase activity
PMF13cell1_RS10100	COG2205	protein histidine kinase activity
PMF13cell1_RS10100	COG0784	Response regulator, receiver
PMF13cell1_RS10120	COG2033	superoxide reductase activity
PMF13cell1_RS10130	COG1013	pyruvate-flavodoxin oxidoreductase activity
PMF13cell1_RS10145	COG1609	Transcriptional regulator
PMF13cell1_RS10155	COG1175	transmembrane transport
PMF13cell1_RS10160	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS10165	COG3507	Belongs to the glycosyl hydrolase 43 family
PMF13cell1_RS10215	COG1757	Na H antiporter
PMF13cell1_RS10220	COG1595	DNA-templated transcription, initiation
PMF13cell1_RS10230	COG1420	regulation of RNA biosynthetic process
PMF13cell1_RS10235	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PMF13cell1_RS10240	COG0443	Heat shock 70 kDa protein
PMF13cell1_RS10245	COG0484	heat shock protein binding
PMF13cell1_RS10255	COG1132	(ABC) transporter
PMF13cell1_RS10260	COG1132	(ABC) transporter
PMF13cell1_RS10295	COG1175	transmembrane transport
PMF13cell1_RS10300	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS10330	COG2264	protein methyltransferase activity
PMF13cell1_RS10335	COG1385	rRNA (uridine-N3-)-methyltransferase activity
PMF13cell1_RS10340	COG1104	cysteine desulfurase activity
PMF13cell1_RS10345	COG0301	tRNA thio-modification
PMF13cell1_RS10355	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PMF13cell1_RS10360	COG4472	Bacterial protein of unknown function (DUF965)
PMF13cell1_RS10375	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMF13cell1_RS10395	COG0826	peptidase U32
PMF13cell1_RS10410	COG2207	Transcriptional regulator
PMF13cell1_RS10415	COG0606	chelatase, subunit chli
PMF13cell1_RS10420	COG0758	DNA mediated transformation
PMF13cell1_RS10425	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PMF13cell1_RS10435	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PMF13cell1_RS10440	COG0459	protein refolding
PMF13cell1_RS10450	COG0516	GMP reductase activity
PMF13cell1_RS10450	COG0517	IMP dehydrogenase activity
PMF13cell1_RS10465	COG2207	Transcriptional regulator
PMF13cell1_RS10465	COG4753	response regulator
PMF13cell1_RS10480	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS10500	COG1501	Belongs to the glycosyl hydrolase 31 family
PMF13cell1_RS10505	COG0393	Putative heavy-metal-binding
PMF13cell1_RS10515	COG1131	(ABC) transporter
PMF13cell1_RS10520	COG1725	Transcriptional regulator
PMF13cell1_RS10530	COG0463	Glycosyl transferase, family 2
PMF13cell1_RS10530	COG0457	Tetratricopeptide repeat
PMF13cell1_RS10540	COG1473	amidohydrolase
PMF13cell1_RS10555	COG3069	C4-dicarboxylate transmembrane transporter activity
PMF13cell1_RS10575	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS10580	COG3870	Protein conserved in bacteria
PMF13cell1_RS10585	COG1811	Na channel or pump
PMF13cell1_RS10600	COG2267	carboxylic ester hydrolase activity
PMF13cell1_RS10605	COG1744	ABC transporter substrate-binding protein PnrA-like
PMF13cell1_RS10610	COG3845	ABC transporter
PMF13cell1_RS10615	COG4603	Belongs to the binding-protein-dependent transport system permease family
PMF13cell1_RS10620	COG1079	Belongs to the binding-protein-dependent transport system permease family
PMF13cell1_RS10635	COG0733	neurotransmitter:sodium symporter activity
PMF13cell1_RS10650	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
PMF13cell1_RS10660	COG3853	Toxic anion resistance protein (TelA)
PMF13cell1_RS10665	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PMF13cell1_RS10680	COG0285	dihydrofolate synthase activity
PMF13cell1_RS10685	COG0302	gtp cyclohydrolase
PMF13cell1_RS10690	COG1418	mRNA catabolic process
PMF13cell1_RS10695	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PMF13cell1_RS10700	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PMF13cell1_RS10700	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PMF13cell1_RS10730	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
PMF13cell1_RS10735	COG0165	Argininosuccinate lyase
PMF13cell1_RS10760	COG1595	DNA-templated transcription, initiation
PMF13cell1_RS10770	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PMF13cell1_RS10775	COG2801	Transposase and inactivated derivatives
PMF13cell1_RS10795	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS10800	COG2986	histidine ammonia-lyase
PMF13cell1_RS10835	COG0191	fructose-bisphosphate aldolase activity
PMF13cell1_RS10840	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS10840	COG2207	Transcriptional regulator
PMF13cell1_RS10850	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS10855	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS10865	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS10870	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS10875	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS10905	COG1609	Transcriptional regulator
PMF13cell1_RS10915	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS10930	COG1312	Catalyzes the dehydration of D-mannonate
PMF13cell1_RS10935	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS10940	COG1175	transmembrane transport
PMF13cell1_RS10945	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS10950	COG1979	alcohol dehydrogenase
PMF13cell1_RS10955	COG3250	beta-galactosidase activity
PMF13cell1_RS10960	COG2207	Transcriptional regulator
PMF13cell1_RS10960	COG4753	response regulator
PMF13cell1_RS10965	COG4555	ABC transporter
PMF13cell1_RS11000	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS11005	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
PMF13cell1_RS11030	COG2207	Transcriptional regulator
PMF13cell1_RS11030	COG4753	response regulator
PMF13cell1_RS11035	COG2972	Histidine kinase
PMF13cell1_RS11065	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS11070	COG0653	protein targeting
PMF13cell1_RS11085	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PMF13cell1_RS11095	COG0733	neurotransmitter:sodium symporter activity
PMF13cell1_RS11100	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PMF13cell1_RS11120	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PMF13cell1_RS11120	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PMF13cell1_RS11130	COG0726	polysaccharide deacetylase
PMF13cell1_RS11135	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
PMF13cell1_RS11145	COG1242	4 iron, 4 sulfur cluster binding
PMF13cell1_RS11165	COG1070	Carbohydrate kinase
PMF13cell1_RS11175	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
PMF13cell1_RS11180	COG4496	protein, YerC YecD
PMF13cell1_RS11210	COG1395	domain, Protein
PMF13cell1_RS11265	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
PMF13cell1_RS11330	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PMF13cell1_RS11360	COG1802	Transcriptional regulator
PMF13cell1_RS11360	COG4626	Terminase
PMF13cell1_RS11365	COG4695	Portal protein
PMF13cell1_RS11465	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PMF13cell1_RS11480	COG0582	viral genome integration into host DNA
PMF13cell1_RS11540	COG0488	(ABC) transporter
PMF13cell1_RS11545	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PMF13cell1_RS11545	COG0456	acetyltransferase
PMF13cell1_RS11555	COG4804	nuclease activity
PMF13cell1_RS11575	COG0534	Mate efflux family protein
PMF13cell1_RS11605	COG0534	Mate efflux family protein
PMF13cell1_RS11620	COG0513	Belongs to the DEAD box helicase family
PMF13cell1_RS11625	COG2198	Histidine kinase
PMF13cell1_RS11625	COG0784	Response regulator, receiver
PMF13cell1_RS11625	COG2205	protein histidine kinase activity
PMF13cell1_RS11630	COG2207	Transcriptional regulator
PMF13cell1_RS11630	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS11635	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS11640	COG0534	Mate efflux family protein
PMF13cell1_RS11645	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS11650	COG2205	protein histidine kinase activity
PMF13cell1_RS11655	COG1136	(ABC) transporter
PMF13cell1_RS11655	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS11675	COG2207	Transcriptional regulator
PMF13cell1_RS11685	COG0640	Transcriptional regulator
PMF13cell1_RS11700	COG3835	regulator
PMF13cell1_RS11705	COG1929	Belongs to the glycerate kinase type-1 family
PMF13cell1_RS11715	COG2080	2 iron, 2 sulfur cluster binding
PMF13cell1_RS11715	COG1529	Aldehyde oxidase and xanthine dehydrogenase
PMF13cell1_RS11730	COG1757	Na H antiporter
PMF13cell1_RS11755	COG0674	pyruvate-flavodoxin oxidoreductase activity
PMF13cell1_RS11755	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PMF13cell1_RS11780	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PMF13cell1_RS11800	COG3708	Transcriptional regulator
PMF13cell1_RS11800	COG2207	Transcriptional regulator
PMF13cell1_RS11815	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS11820	COG5002	protein histidine kinase activity
PMF13cell1_RS11855	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS11860	COG3622	Belongs to the hyi family
PMF13cell1_RS11865	COG2211	Major facilitator Superfamily
PMF13cell1_RS11875	COG2226	methyltransferase
PMF13cell1_RS11880	COG1309	transcriptional regulator
PMF13cell1_RS11890	COG1073	alpha beta
PMF13cell1_RS11890	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
PMF13cell1_RS11890	COG3064	Membrane
PMF13cell1_RS11900	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMF13cell1_RS11905	COG0318	PFAM AMP-dependent synthetase and ligase
PMF13cell1_RS11915	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
PMF13cell1_RS11920	COG1070	Carbohydrate kinase
PMF13cell1_RS11925	COG0235	Class ii aldolase
PMF13cell1_RS11930	COG4154	Belongs to the RbsD FucU family
PMF13cell1_RS11935	COG1720	tRNA m6t6A37 methyltransferase activity
PMF13cell1_RS11940	COG0789	Transcriptional regulator
PMF13cell1_RS11940	COG4978	Transcriptional regulator
PMF13cell1_RS11970	COG1205	dead DEAH box helicase
PMF13cell1_RS11970	COG1111	helicase
PMF13cell1_RS11975	COG0210	DNA helicase
PMF13cell1_RS12005	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS12010	COG1070	Carbohydrate kinase
PMF13cell1_RS12025	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PMF13cell1_RS12040	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PMF13cell1_RS12050	COG2205	protein histidine kinase activity
PMF13cell1_RS12050	COG0784	Response regulator, receiver
PMF13cell1_RS12070	COG5001	Diguanylate cyclase
PMF13cell1_RS12075	COG1940	carbohydrate kinase activity
PMF13cell1_RS12080	COG1063	alcohol dehydrogenase
PMF13cell1_RS12100	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PMF13cell1_RS12105	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PMF13cell1_RS12115	COG1316	TRANSCRIPTIONal
PMF13cell1_RS12125	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
PMF13cell1_RS12130	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PMF13cell1_RS12135	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PMF13cell1_RS12150	COG0254	rRNA binding
PMF13cell1_RS12155	COG3872	metal-dependent enzyme
PMF13cell1_RS12160	COG2890	protein-(glutamine-N5) methyltransferase activity
PMF13cell1_RS12165	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PMF13cell1_RS12175	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMF13cell1_RS12185	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS12190	COG2205	protein histidine kinase activity
PMF13cell1_RS12195	COG1136	(ABC) transporter
PMF13cell1_RS12210	COG1725	Transcriptional regulator
PMF13cell1_RS12225	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PMF13cell1_RS12230	COG1328	CTP reductase activity
PMF13cell1_RS12230	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMF13cell1_RS12255	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PMF13cell1_RS12260	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PMF13cell1_RS12265	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
PMF13cell1_RS12270	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PMF13cell1_RS12285	COG1940	carbohydrate kinase activity
PMF13cell1_RS12290	COG1653	transport
PMF13cell1_RS12295	COG1175	transmembrane transport
PMF13cell1_RS12315	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS12325	COG2221	Nitrite and sulphite reductase 4Fe-4S
PMF13cell1_RS12335	COG4862	establishment of competence for transformation
PMF13cell1_RS12355	COG5001	Diguanylate cyclase
PMF13cell1_RS12360	COG0860	N-Acetylmuramoyl-L-alanine amidase
PMF13cell1_RS12365	COG0009	L-threonylcarbamoyladenylate synthase
PMF13cell1_RS12370	COG0698	ribose 5-phosphate isomerase
PMF13cell1_RS12385	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PMF13cell1_RS12390	COG0617	tRNA 3'-terminal CCA addition
PMF13cell1_RS12395	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PMF13cell1_RS12405	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMF13cell1_RS12415	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
PMF13cell1_RS12440	COG0037	tRNA processing
PMF13cell1_RS12450	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMF13cell1_RS12520	COG0440	acetolactate synthase activity
PMF13cell1_RS12525	COG0028	Belongs to the TPP enzyme family
PMF13cell1_RS12530	COG2315	Protein conserved in bacteria
PMF13cell1_RS12550	COG0723	plastoquinol--plastocyanin reductase activity
PMF13cell1_RS12550	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PMF13cell1_RS12570	COG2972	Histidine kinase
PMF13cell1_RS12575	COG1653	transport
PMF13cell1_RS12590	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS12600	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PMF13cell1_RS12625	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
PMF13cell1_RS12635	COG0138	bifunctional purine biosynthesis protein purh
PMF13cell1_RS12640	COG1063	alcohol dehydrogenase
PMF13cell1_RS12645	COG1609	Transcriptional regulator
PMF13cell1_RS12655	COG1175	transmembrane transport
PMF13cell1_RS12660	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS12665	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
PMF13cell1_RS12670	COG1473	amidohydrolase
PMF13cell1_RS12675	COG3681	Belongs to the UPF0597 family
PMF13cell1_RS12680	COG1486	melibiose metabolic process
PMF13cell1_RS12685	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMF13cell1_RS12715	COG4209	transmembrane transport
PMF13cell1_RS12720	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS12725	COG0733	neurotransmitter:sodium symporter activity
PMF13cell1_RS12730	COG1748	Saccharopine dehydrogenase
PMF13cell1_RS12735	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMF13cell1_RS12765	COG1309	transcriptional regulator
PMF13cell1_RS12770	COG1132	(ABC) transporter
PMF13cell1_RS12770	COG2375	cellular response to nickel ion
PMF13cell1_RS12775	COG1132	(ABC) transporter
PMF13cell1_RS12795	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PMF13cell1_RS12805	COG0708	Exodeoxyribonuclease III
PMF13cell1_RS12820	COG1408	metallophosphoesterase
PMF13cell1_RS12825	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PMF13cell1_RS12845	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PMF13cell1_RS12855	COG2015	COG2015, Alkyl sulfatase and related hydrolases
PMF13cell1_RS12865	COG1937	Protein conserved in bacteria
PMF13cell1_RS12885	COG1199	ATP-dependent helicase activity
PMF13cell1_RS12890	COG1609	Transcriptional regulator
PMF13cell1_RS12895	COG1175	transmembrane transport
PMF13cell1_RS12900	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS12925	COG0251	oxidation-reduction process
PMF13cell1_RS12930	COG1073	alpha beta
PMF13cell1_RS12930	COG2226	methyltransferase
PMF13cell1_RS12935	COG3608	succinylglutamate desuccinylase aspartoacylase
PMF13cell1_RS12940	COG0601	transmembrane transport
PMF13cell1_RS12945	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMF13cell1_RS12955	COG0444	Belongs to the ABC transporter superfamily
PMF13cell1_RS12965	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS12995	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMF13cell1_RS13005	COG3835	regulator
PMF13cell1_RS13020	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PMF13cell1_RS13025	COG0717	Belongs to the dCTP deaminase family
PMF13cell1_RS13060	COG2204	response regulator
PMF13cell1_RS13065	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
PMF13cell1_RS13075	COG1063	alcohol dehydrogenase
PMF13cell1_RS13080	COG1063	alcohol dehydrogenase
PMF13cell1_RS13115	COG5598	trimethylamine methyltransferase
PMF13cell1_RS13125	COG3708	Transcriptional regulator
PMF13cell1_RS13125	COG2207	Transcriptional regulator
PMF13cell1_RS13130	COG0444	Belongs to the ABC transporter superfamily
PMF13cell1_RS13135	COG4608	Belongs to the ABC transporter superfamily
PMF13cell1_RS13145	COG0165	Argininosuccinate lyase
PMF13cell1_RS13155	COG0601	transmembrane transport
PMF13cell1_RS13160	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMF13cell1_RS13175	COG0601	transmembrane transport
PMF13cell1_RS13205	COG1414	Transcriptional regulator
PMF13cell1_RS13210	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
PMF13cell1_RS13220	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PMF13cell1_RS13225	COG0674	pyruvate-flavodoxin oxidoreductase activity
PMF13cell1_RS13225	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PMF13cell1_RS13245	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
PMF13cell1_RS13255	COG2207	Transcriptional regulator
PMF13cell1_RS13255	COG4753	response regulator
PMF13cell1_RS13260	COG2972	Histidine kinase
PMF13cell1_RS13275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMF13cell1_RS13300	COG4209	transmembrane transport
PMF13cell1_RS13305	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS13320	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS13330	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS13340	COG4989	oxidoreductase activity
PMF13cell1_RS13360	COG0789	Transcriptional regulator
PMF13cell1_RS13360	COG4978	Transcriptional regulator
PMF13cell1_RS13380	COG0456	acetyltransferase
PMF13cell1_RS13405	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMF13cell1_RS13410	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMF13cell1_RS13415	COG1120	ATPase activity
PMF13cell1_RS13450	COG3077	Addiction module antitoxin, RelB DinJ family
PMF13cell1_RS13485	COG1609	Transcriptional regulator
PMF13cell1_RS13490	COG1069	ribulokinase activity
PMF13cell1_RS13510	COG1234	tRNA 3'-trailer cleavage
PMF13cell1_RS13540	COG1937	Protein conserved in bacteria
PMF13cell1_RS13555	COG0488	(ABC) transporter
PMF13cell1_RS13560	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
PMF13cell1_RS13565	COG0784	Response regulator, receiver
PMF13cell1_RS13565	COG2198	Histidine kinase
PMF13cell1_RS13565	COG2205	protein histidine kinase activity
PMF13cell1_RS13570	COG5001	Diguanylate cyclase
PMF13cell1_RS13570	COG2203	Gaf domain
PMF13cell1_RS13570	COG3706	GGDEF domain
PMF13cell1_RS13570	COG4251	negative regulation of phosphorylation
PMF13cell1_RS13575	COG3706	GGDEF domain
PMF13cell1_RS13580	COG1045	serine acetyltransferase
PMF13cell1_RS13585	COG0215	cysteine-tRNA ligase activity
PMF13cell1_RS13595	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMF13cell1_RS13610	COG1253	flavin adenine dinucleotide binding
PMF13cell1_RS13615	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PMF13cell1_RS13650	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS13660	COG1063	alcohol dehydrogenase
PMF13cell1_RS13665	COG1063	alcohol dehydrogenase
PMF13cell1_RS13675	COG1070	Carbohydrate kinase
PMF13cell1_RS13695	COG2186	Transcriptional regulator
PMF13cell1_RS13700	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PMF13cell1_RS13705	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PMF13cell1_RS13710	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PMF13cell1_RS13710	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PMF13cell1_RS13715	COG3959	Transketolase, thiamine diphosphate binding domain
PMF13cell1_RS13720	COG3958	Transketolase
PMF13cell1_RS13725	COG0287	Prephenate dehydrogenase
PMF13cell1_RS13730	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMF13cell1_RS13735	COG0549	Belongs to the carbamate kinase family
PMF13cell1_RS13740	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PMF13cell1_RS13745	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
PMF13cell1_RS13780	COG3608	succinylglutamate desuccinylase aspartoacylase
PMF13cell1_RS13780	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PMF13cell1_RS13785	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PMF13cell1_RS13795	COG5001	Diguanylate cyclase
PMF13cell1_RS13795	COG5002	protein histidine kinase activity
PMF13cell1_RS13800	COG1854	S-ribosylhomocysteine lyase activity
PMF13cell1_RS13805	COG2205	protein histidine kinase activity
PMF13cell1_RS13810	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS13820	COG1175	transmembrane transport
PMF13cell1_RS13860	COG0564	pseudouridine synthase activity
PMF13cell1_RS13865	COG1177	transmembrane transport
PMF13cell1_RS13870	COG1176	ABC-type spermidine putrescine transport system, permease component I
PMF13cell1_RS13875	COG3842	ATPase activity
PMF13cell1_RS13900	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PMF13cell1_RS13940	COG0640	Transcriptional regulator
PMF13cell1_RS13970	COG2205	protein histidine kinase activity
PMF13cell1_RS13990	COG1131	(ABC) transporter
PMF13cell1_RS13995	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PMF13cell1_RS14000	COG0617	tRNA 3'-terminal CCA addition
PMF13cell1_RS14015	COG0534	Mate efflux family protein
PMF13cell1_RS14030	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS14035	COG2972	Histidine kinase
PMF13cell1_RS14040	COG1653	transport
PMF13cell1_RS14045	COG1175	transmembrane transport
PMF13cell1_RS14055	COG0366	Alpha amylase catalytic
PMF13cell1_RS14060	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PMF13cell1_RS14065	COG1396	sequence-specific DNA binding
PMF13cell1_RS14080	COG2198	Histidine kinase
PMF13cell1_RS14080	COG0784	Response regulator, receiver
PMF13cell1_RS14080	COG2205	protein histidine kinase activity
PMF13cell1_RS14090	COG1012	belongs to the aldehyde dehydrogenase family
PMF13cell1_RS14105	COG0840	transmembrane signaling receptor activity
PMF13cell1_RS14140	COG1131	(ABC) transporter
PMF13cell1_RS14155	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS14200	COG2972	Histidine kinase
PMF13cell1_RS14205	COG4753	response regulator
PMF13cell1_RS14205	COG2207	Transcriptional regulator
PMF13cell1_RS14210	COG1653	transport
PMF13cell1_RS14215	COG1653	transport
PMF13cell1_RS14220	COG1175	transmembrane transport
PMF13cell1_RS14225	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS14250	COG1695	Transcriptional regulator
PMF13cell1_RS14255	COG2972	Histidine kinase
PMF13cell1_RS14260	COG2207	Transcriptional regulator
PMF13cell1_RS14260	COG4753	response regulator
PMF13cell1_RS14270	COG1175	transmembrane transport
PMF13cell1_RS14305	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
PMF13cell1_RS14310	COG1132	(ABC) transporter
PMF13cell1_RS14315	COG1132	(ABC) transporter
PMF13cell1_RS14320	COG1733	regulation of RNA biosynthetic process
PMF13cell1_RS14330	COG0534	Mate efflux family protein
PMF13cell1_RS14340	COG2207	Transcriptional regulator
PMF13cell1_RS14340	COG4753	response regulator
PMF13cell1_RS14345	COG2972	Histidine kinase
PMF13cell1_RS14355	COG1175	transmembrane transport
PMF13cell1_RS14385	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS14390	COG0582	viral genome integration into host DNA
PMF13cell1_RS14395	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS14400	COG3344	reverse transcriptase
PMF13cell1_RS14420	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS14435	COG4667	esterase of the alpha-beta hydrolase superfamily
PMF13cell1_RS14450	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS14455	COG2508	Transcriptional regulator
PMF13cell1_RS14465	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PMF13cell1_RS14485	COG2878	Part of a membrane complex involved in electron transport
PMF13cell1_RS14490	COG2414	aldehyde ferredoxin oxidoreductase
PMF13cell1_RS14525	COG2207	Transcriptional regulator
PMF13cell1_RS14545	COG0534	Mate efflux family protein
PMF13cell1_RS14555	COG2207	Transcriptional regulator
PMF13cell1_RS14555	COG4753	response regulator
PMF13cell1_RS14560	COG2972	Histidine kinase
PMF13cell1_RS14570	COG2182	Extracellular solute-binding protein
PMF13cell1_RS14575	COG1175	transmembrane transport
PMF13cell1_RS14580	COG3833	ABC-type maltose transport systems, permease component
PMF13cell1_RS14595	COG0457	Tetratricopeptide repeat
PMF13cell1_RS14610	COG1574	metal-dependent hydrolase with the TIM-barrel fold
PMF13cell1_RS14615	COG2610	gluconate transmembrane transporter activity
PMF13cell1_RS14620	COG0697	spore germination
PMF13cell1_RS14630	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMF13cell1_RS14640	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PMF13cell1_RS14650	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PMF13cell1_RS14650	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PMF13cell1_RS14655	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMF13cell1_RS14660	COG1070	Carbohydrate kinase
PMF13cell1_RS14680	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
PMF13cell1_RS14690	COG0561	phosphatase activity
PMF13cell1_RS14695	COG2207	Transcriptional regulator
PMF13cell1_RS14705	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS14710	COG1063	alcohol dehydrogenase
PMF13cell1_RS14715	COG4213	ABC transporter substrate-binding protein
PMF13cell1_RS14720	COG1129	ABC transporter
PMF13cell1_RS14725	COG1172	Belongs to the binding-protein-dependent transport system permease family
PMF13cell1_RS14730	COG1882	Formate acetyltransferase
PMF13cell1_RS14735	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMF13cell1_RS14740	COG2207	Transcriptional regulator
PMF13cell1_RS14740	COG4753	response regulator
PMF13cell1_RS14745	COG2972	Histidine kinase
PMF13cell1_RS14755	COG0346	lactoylglutathione lyase activity
PMF13cell1_RS14760	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
PMF13cell1_RS14765	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS14785	COG2211	Major facilitator Superfamily
PMF13cell1_RS14800	COG0582	viral genome integration into host DNA
PMF13cell1_RS14835	COG4667	esterase of the alpha-beta hydrolase superfamily
PMF13cell1_RS14845	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMF13cell1_RS14850	COG2972	Histidine kinase
PMF13cell1_RS14860	COG1175	transmembrane transport
PMF13cell1_RS14865	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS14870	COG4753	response regulator
PMF13cell1_RS14870	COG2207	Transcriptional regulator
PMF13cell1_RS14880	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PMF13cell1_RS14905	COG0613	PHP domain protein
PMF13cell1_RS14910	COG0534	Mate efflux family protein
PMF13cell1_RS14940	COG0671	phosphoesterase, PA-phosphatase related
PMF13cell1_RS14945	COG0561	phosphatase activity
PMF13cell1_RS14950	COG0187	DNA topoisomerase II activity
PMF13cell1_RS14955	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMF13cell1_RS14960	COG0598	Magnesium transport protein CorA
PMF13cell1_RS14975	COG0195	Participates in both transcription termination and antitermination
PMF13cell1_RS14980	COG2740	Nucleic-acid-binding protein implicated in transcription termination
PMF13cell1_RS14990	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PMF13cell1_RS14995	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PMF13cell1_RS15000	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
PMF13cell1_RS15005	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PMF13cell1_RS15010	COG0196	riboflavin kinase activity
PMF13cell1_RS15015	COG0704	Plays a role in the regulation of phosphate uptake
PMF13cell1_RS15020	COG0791	NLP P60 protein
PMF13cell1_RS15025	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PMF13cell1_RS15030	COG1185	polyribonucleotide nucleotidyltransferase activity
PMF13cell1_RS15035	COG0602	queuosine metabolic process
PMF13cell1_RS15040	COG0756	dUTP diphosphatase activity
PMF13cell1_RS15050	COG1309	transcriptional regulator
PMF13cell1_RS15055	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PMF13cell1_RS15080	COG1523	belongs to the glycosyl hydrolase 13 family
PMF13cell1_RS15095	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PMF13cell1_RS15100	COG4894	glucomannan catabolic process
PMF13cell1_RS15115	COG2721	sulfolactate sulfo-lyase activity
PMF13cell1_RS15120	COG1609	Transcriptional regulator
PMF13cell1_RS15140	COG1904	glucuronate isomerase
PMF13cell1_RS15145	COG2233	PERMEase
PMF13cell1_RS15165	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS15200	COG1959	2 iron, 2 sulfur cluster binding
PMF13cell1_RS15220	COG0330	HflC and HflK could
PMF13cell1_RS15245	COG1757	Na H antiporter
PMF13cell1_RS15250	COG5426	von Willebrand factor, type A
PMF13cell1_RS15255	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PMF13cell1_RS15285	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PMF13cell1_RS15305	COG0544	peptidyl-prolyl cis-trans isomerase activity
PMF13cell1_RS15315	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PMF13cell1_RS15320	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PMF13cell1_RS15325	COG0218	Necessary for normal cell division and for the maintenance of normal septation
PMF13cell1_RS15330	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PMF13cell1_RS15335	COG1122	ATPase activity
PMF13cell1_RS15345	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMF13cell1_RS15385	COG1278	Cold shock
PMF13cell1_RS15390	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PMF13cell1_RS15395	COG0284	orotidine-5'-phosphate decarboxylase activity
PMF13cell1_RS15405	COG0167	dihydroorotate dehydrogenase activity
PMF13cell1_RS15410	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PMF13cell1_RS15435	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PMF13cell1_RS15440	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
PMF13cell1_RS15445	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PMF13cell1_RS15450	COG0151	Belongs to the GarS family
PMF13cell1_RS15460	COG0542	response to heat
PMF13cell1_RS15470	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PMF13cell1_RS15505	COG1309	transcriptional regulator
PMF13cell1_RS15525	COG1288	antiporter activity
PMF13cell1_RS15530	COG1473	amidohydrolase
PMF13cell1_RS15570	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PMF13cell1_RS15600	COG1194	a g-specific adenine glycosylase
PMF13cell1_RS15605	COG1216	Glycosyl transferase, family 2
PMF13cell1_RS15615	COG0584	glycerophosphoryl diester phosphodiesterase
PMF13cell1_RS15620	COG1597	lipid kinase activity
PMF13cell1_RS15625	COG1803	Methylglyoxal synthase
PMF13cell1_RS15635	COG0534	Mate efflux family protein
PMF13cell1_RS15645	COG2357	RelA SpoT domain protein
PMF13cell1_RS15655	COG0484	heat shock protein binding
PMF13cell1_RS15665	COG3681	Belongs to the UPF0597 family
PMF13cell1_RS15680	COG2843	Capsule synthesis protein
PMF13cell1_RS15685	COG1473	amidohydrolase
PMF13cell1_RS15700	COG2964	Protein conserved in bacteria
PMF13cell1_RS15705	COG0251	oxidation-reduction process
PMF13cell1_RS15710	COG2515	1-aminocyclopropane-1-carboxylate deaminase
PMF13cell1_RS15715	COG1757	Na H antiporter
PMF13cell1_RS15745	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PMF13cell1_RS15750	COG3835	regulator
PMF13cell1_RS15760	COG1309	transcriptional regulator
PMF13cell1_RS15795	COG1247	-acetyltransferase
PMF13cell1_RS15800	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PMF13cell1_RS15820	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
PMF13cell1_RS15825	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PMF13cell1_RS15845	COG2986	histidine ammonia-lyase
PMF13cell1_RS15870	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PMF13cell1_RS15875	COG2207	Transcriptional regulator
PMF13cell1_RS15880	COG1653	transport
PMF13cell1_RS15885	COG1175	transmembrane transport
PMF13cell1_RS15900	COG1115	amino acid carrier protein
PMF13cell1_RS15915	COG0251	oxidation-reduction process
PMF13cell1_RS15920	COG5598	trimethylamine methyltransferase
PMF13cell1_RS15940	COG2986	histidine ammonia-lyase
PMF13cell1_RS15970	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
PMF13cell1_RS15975	COG2986	histidine ammonia-lyase
PMF13cell1_RS15985	COG0492	ferredoxin-NADP+ reductase activity
PMF13cell1_RS16005	COG1473	amidohydrolase
PMF13cell1_RS16015	COG1073	alpha beta
PMF13cell1_RS16020	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PMF13cell1_RS16025	COG1228	amidohydrolase
PMF13cell1_RS16035	COG3404	Formiminotransferase-cyclodeaminase
PMF13cell1_RS16040	COG3052	prosthetic group binding
PMF13cell1_RS16095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PMF13cell1_RS16115	COG0460	homoserine dehydrogenase
PMF13cell1_RS16125	COG1735	metal-dependent hydrolase with the TIM-barrel fold
PMF13cell1_RS16135	COG0488	(ABC) transporter
PMF13cell1_RS16145	COG1733	regulation of RNA biosynthetic process
PMF13cell1_RS16150	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PMF13cell1_RS16155	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
PMF13cell1_RS16160	COG2207	Transcriptional regulator
PMF13cell1_RS16175	COG2211	Major facilitator Superfamily
PMF13cell1_RS16180	COG0493	'glutamate synthase
PMF13cell1_RS16205	COG0747	negative chemotaxis
PMF13cell1_RS16210	COG0601	transmembrane transport
PMF13cell1_RS16215	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMF13cell1_RS16220	COG0444	Belongs to the ABC transporter superfamily
PMF13cell1_RS16225	COG4608	Belongs to the ABC transporter superfamily
PMF13cell1_RS16230	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PMF13cell1_RS16240	COG0205	6-phosphofructokinase activity
PMF13cell1_RS16245	COG1982	Orn Lys Arg decarboxylase major
PMF13cell1_RS16275	COG3534	alpha-L-arabinofuranosidase
PMF13cell1_RS16280	COG1653	transport
PMF13cell1_RS16285	COG1175	transmembrane transport
PMF13cell1_RS16290	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS16300	COG1115	amino acid carrier protein
PMF13cell1_RS16320	COG1653	transport
PMF13cell1_RS16325	COG1175	transmembrane transport
PMF13cell1_RS16330	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS16335	COG3250	beta-galactosidase activity
PMF13cell1_RS16345	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
PMF13cell1_RS16355	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PMF13cell1_RS16360	COG1309	transcriptional regulator
PMF13cell1_RS16365	COG0534	Mate efflux family protein
PMF13cell1_RS16370	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PMF13cell1_RS16380	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
PMF13cell1_RS16390	COG0402	S-adenosylhomocysteine deaminase activity
PMF13cell1_RS16395	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
PMF13cell1_RS16395	COG0493	'glutamate synthase
PMF13cell1_RS16400	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PMF13cell1_RS16405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PMF13cell1_RS16415	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PMF13cell1_RS16420	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PMF13cell1_RS16425	COG1116	anion transmembrane transporter activity
PMF13cell1_RS16435	COG0561	phosphatase activity
PMF13cell1_RS16445	COG0546	phosphoglycolate phosphatase activity
PMF13cell1_RS16450	COG0561	phosphatase activity
PMF13cell1_RS16460	COG1012	belongs to the aldehyde dehydrogenase family
PMF13cell1_RS16465	COG4106	trans-aconitate 2-methyltransferase activity
PMF13cell1_RS16470	COG3250	beta-galactosidase activity
PMF13cell1_RS16485	COG1175	transmembrane transport
PMF13cell1_RS16490	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS16510	COG3850	Histidine kinase
PMF13cell1_RS16510	COG5002	protein histidine kinase activity
PMF13cell1_RS16515	COG1136	(ABC) transporter
PMF13cell1_RS16525	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMF13cell1_RS16530	COG1882	Formate acetyltransferase
PMF13cell1_RS16535	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS16535	COG4977	sequence-specific DNA binding
PMF13cell1_RS16540	COG2207	Transcriptional regulator
PMF13cell1_RS16540	COG4753	response regulator
PMF13cell1_RS16555	COG1175	transmembrane transport
PMF13cell1_RS16565	COG2972	Histidine kinase
PMF13cell1_RS16570	COG2201	protein-glutamate methylesterase activity
PMF13cell1_RS16590	COG2972	Histidine kinase
PMF13cell1_RS16600	COG1653	transport
PMF13cell1_RS16625	COG2972	Histidine kinase
PMF13cell1_RS16630	COG4753	response regulator
PMF13cell1_RS16630	COG2207	Transcriptional regulator
PMF13cell1_RS16645	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS16680	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS16685	COG5002	protein histidine kinase activity
PMF13cell1_RS16695	COG1136	(ABC) transporter
PMF13cell1_RS16700	COG2816	NAD+ diphosphatase activity
PMF13cell1_RS16730	COG0534	Mate efflux family protein
PMF13cell1_RS16735	COG2388	GCN5-related N-acetyl-transferase
PMF13cell1_RS16740	COG3250	beta-galactosidase activity
PMF13cell1_RS16760	COG4536	flavin adenine dinucleotide binding
PMF13cell1_RS16790	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PMF13cell1_RS16790	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PMF13cell1_RS16795	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
PMF13cell1_RS16805	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PMF13cell1_RS16810	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PMF13cell1_RS16815	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PMF13cell1_RS16825	COG0124	histidyl-tRNA synthetase
PMF13cell1_RS16830	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PMF13cell1_RS16865	COG1175	transmembrane transport
PMF13cell1_RS16875	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMF13cell1_RS16880	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS16895	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS16905	COG1307	EDD domain protein, DegV family
PMF13cell1_RS16915	COG0515	serine threonine protein kinase
PMF13cell1_RS16935	COG0052	Belongs to the universal ribosomal protein uS2 family
PMF13cell1_RS16985	COG0463	Glycosyl transferase, family 2
PMF13cell1_RS17015	COG1215	transferase activity, transferring glycosyl groups
PMF13cell1_RS17020	COG1216	Glycosyl transferase, family 2
PMF13cell1_RS17020	COG1442	glycosyl transferase family 8
PMF13cell1_RS17030	COG2207	Transcriptional regulator
PMF13cell1_RS17050	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PMF13cell1_RS17060	COG4948	Mandelate Racemase Muconate Lactonizing
PMF13cell1_RS17070	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS17080	COG0778	Nitroreductase
PMF13cell1_RS17100	COG4129	membrane
PMF13cell1_RS17110	COG0714	Associated with various cellular activities
PMF13cell1_RS17125	COG1278	Cold shock
PMF13cell1_RS17130	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PMF13cell1_RS17195	COG1191	sigma factor activity
PMF13cell1_RS17205	COG0789	Transcriptional regulator
PMF13cell1_RS17215	COG1136	(ABC) transporter
PMF13cell1_RS17220	COG2205	protein histidine kinase activity
PMF13cell1_RS17225	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS17235	COG0534	Mate efflux family protein
PMF13cell1_RS17250	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
PMF13cell1_RS17255	COG2207	Transcriptional regulator
PMF13cell1_RS17305	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS17310	COG1027	Aspartate ammonia-lyase
PMF13cell1_RS17315	COG3588	fructose-bisphosphate aldolase
PMF13cell1_RS17320	COG1349	DNA-binding transcription factor activity
PMF13cell1_RS17325	COG1653	transport
PMF13cell1_RS17335	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS17340	COG3842	ATPase activity
PMF13cell1_RS17345	COG3842	ATPase activity
PMF13cell1_RS17355	COG1070	Carbohydrate kinase
PMF13cell1_RS17360	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PMF13cell1_RS17365	COG1070	Carbohydrate kinase
PMF13cell1_RS17400	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMF13cell1_RS17410	COG5001	Diguanylate cyclase
PMF13cell1_RS17420	COG0564	pseudouridine synthase activity
PMF13cell1_RS17425	COG2508	Transcriptional regulator
PMF13cell1_RS17435	COG0443	Heat shock 70 kDa protein
PMF13cell1_RS17440	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS17450	COG1132	(ABC) transporter
PMF13cell1_RS17455	COG1132	(ABC) transporter
PMF13cell1_RS17465	COG3254	rhamnose metabolic process
PMF13cell1_RS17490	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS17505	COG2414	aldehyde ferredoxin oxidoreductase
PMF13cell1_RS17510	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
PMF13cell1_RS17520	COG2135	peptidase activity
PMF13cell1_RS17525	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PMF13cell1_RS17555	COG2508	Transcriptional regulator
PMF13cell1_RS17560	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMF13cell1_RS17565	COG1882	Formate acetyltransferase
PMF13cell1_RS17570	COG1393	Belongs to the ArsC family
PMF13cell1_RS17575	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PMF13cell1_RS17580	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PMF13cell1_RS17595	COG0351	phosphomethylpyrimidine kinase
PMF13cell1_RS17595	COG0352	thiamine-phosphate diphosphorylase activity
PMF13cell1_RS17600	COG1882	Formate acetyltransferase
PMF13cell1_RS17605	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMF13cell1_RS17620	COG1278	Cold shock
PMF13cell1_RS17630	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PMF13cell1_RS17635	COG2203	Gaf domain
PMF13cell1_RS17635	COG2199	diguanylate cyclase activity
PMF13cell1_RS17645	COG0534	Mate efflux family protein
PMF13cell1_RS17665	COG1192	Involved in chromosome partitioning
PMF13cell1_RS17700	COG0732	type I restriction modification DNA specificity domain
PMF13cell1_RS17705	COG0732	type I restriction modification DNA specificity domain
PMF13cell1_RS17760	COG0494	nUDIX hydrolase
PMF13cell1_RS17785	COG1401	restriction endodeoxyribonuclease activity
PMF13cell1_RS17810	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMF13cell1_RS17815	COG2755	lipolytic protein G-D-S-L family
PMF13cell1_RS17815	COG0657	acetylesterase activity
PMF13cell1_RS17820	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PMF13cell1_RS17830	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS17835	COG0582	viral genome integration into host DNA
PMF13cell1_RS17875	COG3118	belongs to the thioredoxin family
PMF13cell1_RS17880	COG0492	ferredoxin-NADP+ reductase activity
PMF13cell1_RS17885	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PMF13cell1_RS17890	COG0356	it plays a direct role in the translocation of protons across the membrane
PMF13cell1_RS17905	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMF13cell1_RS17910	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PMF13cell1_RS17915	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PMF13cell1_RS17920	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PMF13cell1_RS17925	COG0355	proton-transporting ATP synthase activity, rotational mechanism
PMF13cell1_RS17935	COG1131	(ABC) transporter
PMF13cell1_RS17945	COG3620	sequence-specific DNA binding
PMF13cell1_RS17955	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS17965	COG0601	transmembrane transport
PMF13cell1_RS17970	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMF13cell1_RS17975	COG0747	negative chemotaxis
PMF13cell1_RS17980	COG4172	Belongs to the ABC transporter superfamily
PMF13cell1_RS18010	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PMF13cell1_RS18015	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS18020	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PMF13cell1_RS18025	COG0066	3-isopropylmalate dehydratase activity
PMF13cell1_RS18060	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
PMF13cell1_RS18065	COG2508	Transcriptional regulator
PMF13cell1_RS18085	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PMF13cell1_RS18105	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PMF13cell1_RS18135	COG2385	sporulation resulting in formation of a cellular spore
PMF13cell1_RS18135	COG2247	cell wall binding repeat
PMF13cell1_RS18145	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PMF13cell1_RS18150	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMF13cell1_RS18150	COG0072	phenylalanine-tRNA ligase activity
PMF13cell1_RS18155	COG0406	alpha-ribazole phosphatase activity
PMF13cell1_RS18160	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PMF13cell1_RS18220	COG1104	cysteine desulfurase activity
PMF13cell1_RS18230	COG1074	ATP-dependent DNA helicase activity
PMF13cell1_RS18245	COG0514	ATP-dependent DNA helicase (RecQ)
PMF13cell1_RS18265	COG3513	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PMF13cell1_RS18300	COG1442	glycosyl transferase family 8
PMF13cell1_RS18315	COG1132	(ABC) transporter
PMF13cell1_RS18355	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PMF13cell1_RS18365	COG2239	Acts as a magnesium transporter
PMF13cell1_RS18400	COG1131	(ABC) transporter
PMF13cell1_RS18405	COG1131	(ABC) transporter
PMF13cell1_RS18415	COG1309	transcriptional regulator
PMF13cell1_RS18430	COG3706	GGDEF domain
PMF13cell1_RS18440	COG5002	protein histidine kinase activity
PMF13cell1_RS18445	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS18445	COG1136	(ABC) transporter
PMF13cell1_RS18455	COG0426	domain, Protein
PMF13cell1_RS18455	COG1773	rubredoxin
PMF13cell1_RS18480	COG5001	Diguanylate cyclase
PMF13cell1_RS18480	COG3300	MHYT domain
PMF13cell1_RS18505	COG0784	Response regulator, receiver
PMF13cell1_RS18505	COG2205	protein histidine kinase activity
PMF13cell1_RS18510	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS18515	COG5002	protein histidine kinase activity
PMF13cell1_RS18520	COG1136	(ABC) transporter
PMF13cell1_RS18530	COG4716	Myosin-crossreactive antigen
PMF13cell1_RS18540	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
PMF13cell1_RS18545	COG0287	Prephenate dehydrogenase
PMF13cell1_RS18550	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PMF13cell1_RS18560	COG0495	leucyl-tRNA aminoacylation
PMF13cell1_RS18580	COG2201	protein-glutamate methylesterase activity
PMF13cell1_RS18585	COG0840	transmembrane signaling receptor activity
PMF13cell1_RS18590	COG1776	CheC inhibitor of MCP methylation
PMF13cell1_RS18595	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
PMF13cell1_RS18605	COG2198	Histidine kinase
PMF13cell1_RS18605	COG0643	Histidine kinase
PMF13cell1_RS18615	COG2199	diguanylate cyclase activity
PMF13cell1_RS18625	COG0443	Heat shock 70 kDa protein
PMF13cell1_RS18635	COG1293	RNA-binding protein homologous to eukaryotic snRNP
PMF13cell1_RS18640	COG1561	YicC-like family, N-terminal region
PMF13cell1_RS18645	COG2052	Domain of unknown function (DUF370)
PMF13cell1_RS18650	COG0194	GDP metabolic process
PMF13cell1_RS18655	COG1758	RNA polymerase activity
PMF13cell1_RS18660	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PMF13cell1_RS18665	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PMF13cell1_RS18670	COG1058	Belongs to the CinA family
PMF13cell1_RS18670	COG1546	Belongs to the CinA family
PMF13cell1_RS18700	COG1404	Belongs to the peptidase S8 family
PMF13cell1_RS18705	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PMF13cell1_RS18710	COG1802	Transcriptional regulator
PMF13cell1_RS18720	COG1131	(ABC) transporter
PMF13cell1_RS18730	COG0488	(ABC) transporter
PMF13cell1_RS18735	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PMF13cell1_RS18740	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PMF13cell1_RS18740	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
PMF13cell1_RS18745	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PMF13cell1_RS18750	COG2337	Toxic component of a toxin-antitoxin (TA) module
PMF13cell1_RS18760	COG1253	flavin adenine dinucleotide binding
PMF13cell1_RS18765	COG0217	transcriptional regulatory protein
PMF13cell1_RS18775	COG0740	serine-type endopeptidase activity
PMF13cell1_RS18780	COG1968	undecaprenyl-diphosphatase activity
PMF13cell1_RS18785	COG1674	ftsk spoiiie
PMF13cell1_RS18810	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PMF13cell1_RS18820	COG1011	Hydrolase
PMF13cell1_RS18830	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMF13cell1_RS18870	COG5002	protein histidine kinase activity
PMF13cell1_RS18870	COG0784	Response regulator, receiver
PMF13cell1_RS18870	COG2205	protein histidine kinase activity
PMF13cell1_RS18875	COG2203	Gaf domain
PMF13cell1_RS18875	COG5001	Diguanylate cyclase
PMF13cell1_RS18875	COG4251	negative regulation of phosphorylation
PMF13cell1_RS18875	COG3706	GGDEF domain
PMF13cell1_RS18880	COG5001	Diguanylate cyclase
PMF13cell1_RS18880	COG3300	MHYT domain
PMF13cell1_RS18885	COG0693	protein deglycase activity
PMF13cell1_RS18960	COG2176	DNA-directed DNA polymerase activity
PMF13cell1_RS19025	COG1408	metallophosphoesterase
PMF13cell1_RS19045	COG1702	phosphate starvation-inducible protein PhoH
PMF13cell1_RS19075	COG5012	cobalamin binding
PMF13cell1_RS19080	COG0646	methionine synthase
PMF13cell1_RS19080	COG1410	methionine synthase
PMF13cell1_RS19085	COG1410	methionine synthase
PMF13cell1_RS19085	COG0646	methionine synthase
PMF13cell1_RS19095	COG5598	trimethylamine methyltransferase
PMF13cell1_RS19100	COG1125	glycine betaine transport
PMF13cell1_RS19100	COG0517	IMP dehydrogenase activity
PMF13cell1_RS19105	COG1174	glycine betaine transport
PMF13cell1_RS19120	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PMF13cell1_RS19125	COG4224	UPF0291 protein
PMF13cell1_RS19135	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PMF13cell1_RS19140	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PMF13cell1_RS19150	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PMF13cell1_RS19155	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
PMF13cell1_RS19160	COG2081	HI0933 family
PMF13cell1_RS19165	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
PMF13cell1_RS19190	COG0768	penicillin binding
PMF13cell1_RS19195	COG2894	cell division
PMF13cell1_RS19200	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
PMF13cell1_RS19205	COG0772	Belongs to the SEDS family
PMF13cell1_RS19210	COG1803	Methylglyoxal synthase
PMF13cell1_RS19215	COG1686	Belongs to the peptidase S11 family
PMF13cell1_RS19225	COG2155	Conserved Protein
PMF13cell1_RS19235	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PMF13cell1_RS19245	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PMF13cell1_RS19250	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PMF13cell1_RS19260	COG0564	pseudouridine synthase activity
PMF13cell1_RS19270	COG0037	tRNA processing
PMF13cell1_RS19275	COG0628	permease
PMF13cell1_RS19280	COG1490	D-aminoacyl-tRNA deacylase activity
PMF13cell1_RS19290	COG5002	protein histidine kinase activity
PMF13cell1_RS19295	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS19305	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS19310	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS19325	COG3708	Transcriptional regulator
PMF13cell1_RS19325	COG2207	Transcriptional regulator
PMF13cell1_RS19330	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS19335	COG5002	protein histidine kinase activity
PMF13cell1_RS19340	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS19340	COG1136	(ABC) transporter
PMF13cell1_RS19345	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS19360	COG0534	Mate efflux family protein
PMF13cell1_RS19370	COG1201	RNA secondary structure unwinding
PMF13cell1_RS19380	COG1733	regulation of RNA biosynthetic process
PMF13cell1_RS19415	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS19420	COG3706	GGDEF domain
PMF13cell1_RS19435	COG2205	protein histidine kinase activity
PMF13cell1_RS19440	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS19470	COG0655	NAD(P)H dehydrogenase (quinone) activity
PMF13cell1_RS19480	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS19490	COG5002	protein histidine kinase activity
PMF13cell1_RS19495	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS19515	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS19530	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS19545	COG1472	Belongs to the glycosyl hydrolase 3 family
PMF13cell1_RS19555	COG1216	Glycosyl transferase, family 2
PMF13cell1_RS19580	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS19580	COG1136	(ABC) transporter
PMF13cell1_RS19610	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
PMF13cell1_RS19635	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS19640	COG0642	Histidine kinase
PMF13cell1_RS19640	COG5002	protein histidine kinase activity
PMF13cell1_RS19645	COG0667	Aldo Keto reductase
PMF13cell1_RS19650	COG1971	Probably functions as a manganese efflux pump
PMF13cell1_RS19655	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS19660	COG0642	Histidine kinase
PMF13cell1_RS19670	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS19670	COG1136	(ABC) transporter
PMF13cell1_RS19680	COG1136	(ABC) transporter
PMF13cell1_RS19685	COG5002	protein histidine kinase activity
PMF13cell1_RS19690	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS19700	COG0038	chloride channel
PMF13cell1_RS19725	COG0697	spore germination
PMF13cell1_RS19730	COG2207	Transcriptional regulator
PMF13cell1_RS19730	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS19760	COG2378	regulation of single-species biofilm formation
PMF13cell1_RS19765	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
PMF13cell1_RS19770	COG3507	Belongs to the glycosyl hydrolase 43 family
PMF13cell1_RS19790	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS19795	COG1136	(ABC) transporter
PMF13cell1_RS19800	COG5002	protein histidine kinase activity
PMF13cell1_RS19805	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS19815	COG2059	Chromate
PMF13cell1_RS19825	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS19845	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PMF13cell1_RS19860	COG0488	(ABC) transporter
PMF13cell1_RS19865	COG1686	Belongs to the peptidase S11 family
PMF13cell1_RS19900	COG1131	(ABC) transporter
PMF13cell1_RS19920	COG0371	Dehydrogenase
PMF13cell1_RS19930	COG1349	DNA-binding transcription factor activity
PMF13cell1_RS19935	COG1609	Transcriptional regulator
PMF13cell1_RS19950	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMF13cell1_RS19955	COG0799	negative regulation of ribosome biogenesis
PMF13cell1_RS19960	COG1713	HD superfamily hydrolase involved in NAD metabolism
PMF13cell1_RS19965	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PMF13cell1_RS19970	COG1534	Rna-binding protein
PMF13cell1_RS19975	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PMF13cell1_RS19980	COG0211	Belongs to the bacterial ribosomal protein bL27 family
PMF13cell1_RS19990	COG0261	This protein binds to 23S rRNA in the presence of protein L20
PMF13cell1_RS20000	COG1051	belongs to the nudix hydrolase family
PMF13cell1_RS20005	COG1530	ribonuclease E activity
PMF13cell1_RS20035	COG1331	Highly conserved protein containing a thioredoxin domain
PMF13cell1_RS20045	COG2188	Transcriptional regulator
PMF13cell1_RS20075	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS20080	COG0488	(ABC) transporter
PMF13cell1_RS20085	COG0534	Mate efflux family protein
PMF13cell1_RS20100	COG1357	PFAM Pentapeptide repeats (8 copies)
PMF13cell1_RS20155	COG0242	peptide deformylase activity
PMF13cell1_RS20165	COG0789	Transcriptional regulator
PMF13cell1_RS20175	COG2207	Transcriptional regulator
PMF13cell1_RS20175	COG3708	Transcriptional regulator
PMF13cell1_RS20185	COG1733	regulation of RNA biosynthetic process
PMF13cell1_RS20190	COG1396	sequence-specific DNA binding
PMF13cell1_RS20205	COG0596	Alpha beta hydrolase
PMF13cell1_RS20230	COG1131	(ABC) transporter
PMF13cell1_RS20250	COG2207	Transcriptional regulator
PMF13cell1_RS20250	COG3708	Transcriptional regulator
PMF13cell1_RS20255	COG1136	(ABC) transporter
PMF13cell1_RS20270	COG2205	protein histidine kinase activity
PMF13cell1_RS20275	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS20300	COG2205	protein histidine kinase activity
PMF13cell1_RS20305	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS20315	COG0784	Response regulator, receiver
PMF13cell1_RS20315	COG2205	protein histidine kinase activity
PMF13cell1_RS20330	COG0737	Belongs to the 5'-nucleotidase family
PMF13cell1_RS20350	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PMF13cell1_RS20355	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PMF13cell1_RS20375	COG0789	Transcriptional regulator
PMF13cell1_RS20380	COG2205	protein histidine kinase activity
PMF13cell1_RS20390	COG1874	Beta-galactosidase
PMF13cell1_RS20395	COG2207	Transcriptional regulator
PMF13cell1_RS20415	COG1802	Transcriptional regulator
PMF13cell1_RS20430	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PMF13cell1_RS20430	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PMF13cell1_RS20440	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PMF13cell1_RS20465	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PMF13cell1_RS20470	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PMF13cell1_RS20480	COG0534	Mate efflux family protein
PMF13cell1_RS20500	COG2207	Transcriptional regulator
PMF13cell1_RS20500	COG3708	Transcriptional regulator
PMF13cell1_RS20505	COG2382	esterase
PMF13cell1_RS20505	COG3693	PFAM glycoside hydrolase, family 10
PMF13cell1_RS20520	COG1309	transcriptional regulator
PMF13cell1_RS20530	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS20540	COG0719	Fe-S assembly protein
PMF13cell1_RS20550	COG3192	ethanolamine utilization protein
PMF13cell1_RS20555	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
PMF13cell1_RS20565	COG4869	propanediol catabolic process
PMF13cell1_RS20580	COG1454	alcohol dehydrogenase
PMF13cell1_RS20580	COG1012	belongs to the aldehyde dehydrogenase family
PMF13cell1_RS20590	COG4302	ethanolamine ammonia-lyase activity
PMF13cell1_RS20595	COG4303	Ethanolamine ammonia lyase large subunit
PMF13cell1_RS20600	COG4819	ethanolamine utilization protein
PMF13cell1_RS20630	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS20635	COG1136	(ABC) transporter
PMF13cell1_RS20640	COG2205	protein histidine kinase activity
PMF13cell1_RS20675	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMF13cell1_RS20680	COG3331	DNA recombination
PMF13cell1_RS20685	COG0681	Belongs to the peptidase S26 family
PMF13cell1_RS20690	COG0564	pseudouridine synthase activity
PMF13cell1_RS20700	COG4221	oxidoreductase activity
PMF13cell1_RS20715	COG1187	pseudouridine synthase activity
PMF13cell1_RS20720	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PMF13cell1_RS20720	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
PMF13cell1_RS20725	COG2357	RelA SpoT domain protein
PMF13cell1_RS20730	COG0739	heme binding
PMF13cell1_RS20735	COG2195	Cleaves the N-terminal amino acid of tripeptides
PMF13cell1_RS20745	COG3314	Sporulation integral membrane protein YlbJ
PMF13cell1_RS20755	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PMF13cell1_RS20760	COG0742	ribosomal rna small subunit methyltransferase
PMF13cell1_RS20765	COG1803	Methylglyoxal synthase
PMF13cell1_RS20785	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PMF13cell1_RS20790	COG1461	Dihydroxyacetone kinase
PMF13cell1_RS20800	COG0227	Belongs to the bacterial ribosomal protein bL28 family
PMF13cell1_RS20825	COG1051	belongs to the nudix hydrolase family
PMF13cell1_RS20835	COG0768	penicillin binding
PMF13cell1_RS20845	COG0826	peptidase U32
PMF13cell1_RS20855	COG2255	four-way junction helicase activity
PMF13cell1_RS20860	COG0632	four-way junction helicase activity
PMF13cell1_RS20880	COG2878	Part of a membrane complex involved in electron transport
PMF13cell1_RS20880	COG1245	4Fe-4S binding domain
PMF13cell1_RS20885	COG4657	Part of a membrane complex involved in electron transport
PMF13cell1_RS20890	COG4660	Part of a membrane complex involved in electron transport
PMF13cell1_RS20895	COG4659	FMN binding
PMF13cell1_RS20900	COG4658	electron transport chain
PMF13cell1_RS20905	COG4656	Part of a membrane complex involved in electron transport
PMF13cell1_RS20920	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PMF13cell1_RS20920	COG0539	negative regulation of cytoplasmic translation
PMF13cell1_RS20925	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PMF13cell1_RS20930	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
PMF13cell1_RS20935	COG2081	HI0933 family
PMF13cell1_RS20940	COG1737	Transcriptional regulator
PMF13cell1_RS20950	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
PMF13cell1_RS20955	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PMF13cell1_RS20965	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
PMF13cell1_RS20970	COG0159	tryptophan synthase activity
PMF13cell1_RS20980	COG0135	phosphoribosylanthranilate isomerase activity
PMF13cell1_RS20985	COG0134	indole-3-glycerol-phosphate synthase activity
PMF13cell1_RS20990	COG0512	Glutamine amidotransferase of anthranilate synthase
PMF13cell1_RS20990	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PMF13cell1_RS21010	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PMF13cell1_RS21030	COG1115	amino acid carrier protein
PMF13cell1_RS21050	COG2084	Dehydrogenase
PMF13cell1_RS21055	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMF13cell1_RS21060	COG1022	Amp-dependent synthetase and ligase
PMF13cell1_RS21065	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
PMF13cell1_RS21070	COG3852	Histidine kinase
PMF13cell1_RS21090	COG0071	Belongs to the small heat shock protein (HSP20) family
PMF13cell1_RS21105	COG1686	Belongs to the peptidase S11 family
PMF13cell1_RS21110	COG2270	Major facilitator Superfamily
PMF13cell1_RS21120	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PMF13cell1_RS21140	COG0714	Associated with various cellular activities
PMF13cell1_RS21145	COG1408	metallophosphoesterase
PMF13cell1_RS21150	COG0534	Mate efflux family protein
PMF13cell1_RS21155	COG1686	Belongs to the peptidase S11 family
PMF13cell1_RS21170	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMF13cell1_RS21175	COG0828	Belongs to the bacterial ribosomal protein bS21 family
PMF13cell1_RS21180	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PMF13cell1_RS21195	COG2226	methyltransferase
PMF13cell1_RS21200	COG2211	Major facilitator Superfamily
PMF13cell1_RS21205	COG0328	RNA-DNA hybrid ribonuclease activity
PMF13cell1_RS21215	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
PMF13cell1_RS21220	COG0113	porphobilinogen synthase activity
PMF13cell1_RS21230	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PMF13cell1_RS21230	COG1648	precorrin-2 dehydrogenase activity
PMF13cell1_RS21235	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PMF13cell1_RS21240	COG0310	cobalt ion transport
PMF13cell1_RS21275	COG1492	cobalamin metabolic process
PMF13cell1_RS21280	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PMF13cell1_RS21300	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PMF13cell1_RS21310	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
PMF13cell1_RS21345	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
PMF13cell1_RS21350	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PMF13cell1_RS21370	COG3885	ferrous iron binding
PMF13cell1_RS21370	COG2078	PFAM AMMECR1 domain protein
PMF13cell1_RS21375	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMF13cell1_RS21380	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMF13cell1_RS21385	COG3404	Formiminotransferase-cyclodeaminase
PMF13cell1_RS21430	COG1151	hydroxylamine reductase activity
PMF13cell1_RS21440	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
PMF13cell1_RS21460	COG0420	3'-5' exonuclease activity
PMF13cell1_RS21465	COG0656	L-ascorbic acid biosynthetic process
PMF13cell1_RS21470	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS21470	COG1136	(ABC) transporter
PMF13cell1_RS21480	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS21480	COG1136	(ABC) transporter
PMF13cell1_RS21485	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
PMF13cell1_RS21490	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
PMF13cell1_RS21495	COG1160	GTP binding
PMF13cell1_RS21505	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMF13cell1_RS21515	COG1496	oxidoreductase activity
PMF13cell1_RS21520	COG0792	nuclease activity
PMF13cell1_RS21525	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMF13cell1_RS21535	COG0681	Belongs to the peptidase S26 family
PMF13cell1_RS21540	COG0335	large ribosomal subunit rRNA binding
PMF13cell1_RS21555	COG1091	dTDP-4-dehydrorhamnose reductase activity
PMF13cell1_RS21560	COG0789	Transcriptional regulator
PMF13cell1_RS21560	COG4978	Transcriptional regulator
PMF13cell1_RS21575	COG1316	TRANSCRIPTIONal
PMF13cell1_RS21580	COG4509	Sortase family
PMF13cell1_RS21595	COG4464	protein tyrosine phosphatase activity
PMF13cell1_RS21675	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS21690	COG1215	transferase activity, transferring glycosyl groups
PMF13cell1_RS21695	COG0535	radical SAM domain protein
PMF13cell1_RS21705	COG0438	transferase activity, transferring glycosyl groups
PMF13cell1_RS21710	COG0438	transferase activity, transferring glycosyl groups
PMF13cell1_RS21730	COG0336	Belongs to the RNA methyltransferase TrmD family
PMF13cell1_RS21735	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PMF13cell1_RS21740	COG1837	Belongs to the UPF0109 family
PMF13cell1_RS21755	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PMF13cell1_RS21765	COG0758	DNA mediated transformation
PMF13cell1_RS21780	COG1606	tRNA processing
PMF13cell1_RS21785	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PMF13cell1_RS21790	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
PMF13cell1_RS21800	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PMF13cell1_RS21805	COG0552	protein localization to endoplasmic reticulum
PMF13cell1_RS21810	COG1196	nuclear chromosome segregation
PMF13cell1_RS21815	COG0571	ribonuclease III activity
PMF13cell1_RS21820	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMF13cell1_RS21825	COG0416	fatty acid biosynthetic process
PMF13cell1_RS21835	COG0333	Belongs to the bacterial ribosomal protein bL32 family
PMF13cell1_RS21850	COG1323	Belongs to the UPF0348 family
PMF13cell1_RS21860	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
PMF13cell1_RS21860	COG1918	ferrous iron import across plasma membrane
PMF13cell1_RS21875	COG2848	UPF0210 protein
PMF13cell1_RS21885	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
PMF13cell1_RS21890	COG0237	dephospho-CoA kinase activity
PMF13cell1_RS21900	COG1607	acyl-coa hydrolase
PMF13cell1_RS21925	COG4152	abc transporter atp-binding protein
PMF13cell1_RS21930	COG1725	Transcriptional regulator
PMF13cell1_RS21935	COG0824	Thioesterase
PMF13cell1_RS21945	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMF13cell1_RS21950	COG0527	aspartate kinase activity
PMF13cell1_RS21955	COG0436	Aminotransferase
PMF13cell1_RS21960	COG1522	sequence-specific DNA binding
PMF13cell1_RS21970	COG4149	molybdate abc transporter
PMF13cell1_RS21975	COG0725	ABC transporter, periplasmic molybdate-binding protein
PMF13cell1_RS21990	COG0697	spore germination
PMF13cell1_RS22010	COG0534	Mate efflux family protein
PMF13cell1_RS22025	COG0540	Belongs to the ATCase OTCase family
PMF13cell1_RS22035	COG0642	Histidine kinase
PMF13cell1_RS22040	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS22050	COG1136	(ABC) transporter
PMF13cell1_RS22055	COG0077	Prephenate dehydratase
PMF13cell1_RS22055	COG1605	Chorismate mutase
PMF13cell1_RS22085	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PMF13cell1_RS22090	COG0358	DNA primase activity
PMF13cell1_RS22095	COG0232	Belongs to the dGTPase family. Type 2 subfamily
PMF13cell1_RS22100	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PMF13cell1_RS22115	COG2972	Histidine kinase
PMF13cell1_RS22120	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PMF13cell1_RS22120	COG2207	Transcriptional regulator
PMF13cell1_RS22125	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS22130	COG1175	transmembrane transport
PMF13cell1_RS22145	COG4977	sequence-specific DNA binding
PMF13cell1_RS22170	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS22190	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
PMF13cell1_RS22230	COG3158	transport of potassium into the cell
PMF13cell1_RS22235	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PMF13cell1_RS22235	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PMF13cell1_RS22270	COG5632	N-Acetylmuramoyl-L-alanine amidase
PMF13cell1_RS22270	COG3409	Peptidoglycan-binding domain 1 protein
PMF13cell1_RS22270	COG1388	LysM domain
PMF13cell1_RS22425	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMF13cell1_RS22450	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMF13cell1_RS22510	COG1396	sequence-specific DNA binding
PMF13cell1_RS22525	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
PMF13cell1_RS22535	COG0750	zinc metalloprotease
PMF13cell1_RS22545	COG4589	Belongs to the CDS family
PMF13cell1_RS22550	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PMF13cell1_RS22555	COG0233	cytoplasmic translational termination
PMF13cell1_RS22560	COG0528	UMP kinase activity
PMF13cell1_RS22570	COG0733	neurotransmitter:sodium symporter activity
PMF13cell1_RS22585	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
PMF13cell1_RS22605	COG0534	Mate efflux family protein
PMF13cell1_RS22615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PMF13cell1_RS22630	COG0784	Response regulator, receiver
PMF13cell1_RS22630	COG2198	Histidine kinase
PMF13cell1_RS22630	COG2205	protein histidine kinase activity
PMF13cell1_RS22640	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PMF13cell1_RS22660	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS22665	COG1136	(ABC) transporter
PMF13cell1_RS22700	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
PMF13cell1_RS22705	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PMF13cell1_RS22715	COG1131	(ABC) transporter
PMF13cell1_RS22720	COG1725	Transcriptional regulator
PMF13cell1_RS22745	COG0746	molybdenum cofactor guanylyltransferase activity
PMF13cell1_RS22755	COG3383	formate dehydrogenase (NAD+) activity
PMF13cell1_RS22785	COG0438	transferase activity, transferring glycosyl groups
PMF13cell1_RS22790	COG0438	transferase activity, transferring glycosyl groups
PMF13cell1_RS22830	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PMF13cell1_RS22845	COG0165	Argininosuccinate lyase
PMF13cell1_RS22850	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PMF13cell1_RS22855	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMF13cell1_RS22860	COG1116	anion transmembrane transporter activity
PMF13cell1_RS22865	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PMF13cell1_RS22890	COG1136	(ABC) transporter
PMF13cell1_RS22915	COG3279	Response regulator of the LytR AlgR family
PMF13cell1_RS22920	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMF13cell1_RS22945	COG1177	transmembrane transport
PMF13cell1_RS22955	COG3842	ATPase activity
PMF13cell1_RS22985	COG0668	transmembrane transport
PMF13cell1_RS22990	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PMF13cell1_RS22995	COG0516	GMP reductase activity
PMF13cell1_RS22995	COG0517	IMP dehydrogenase activity
PMF13cell1_RS23010	COG1309	transcriptional regulator
PMF13cell1_RS23035	COG0456	acetyltransferase
PMF13cell1_RS23040	COG1160	GTP binding
PMF13cell1_RS23050	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PMF13cell1_RS23060	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PMF13cell1_RS23065	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PMF13cell1_RS23070	COG0028	Belongs to the TPP enzyme family
PMF13cell1_RS23075	COG0129	dihydroxy-acid dehydratase activity
PMF13cell1_RS23095	COG0493	'glutamate synthase
PMF13cell1_RS23095	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
PMF13cell1_RS23100	COG3708	Transcriptional regulator
PMF13cell1_RS23100	COG2207	Transcriptional regulator
PMF13cell1_RS23105	COG1760	l-serine dehydratase
PMF13cell1_RS23110	COG1760	l-serine dehydratase
PMF13cell1_RS23120	COG0343	queuine tRNA-ribosyltransferase activity
PMF13cell1_RS23140	COG5002	protein histidine kinase activity
PMF13cell1_RS23145	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS23180	COG2205	protein histidine kinase activity
PMF13cell1_RS23205	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PMF13cell1_RS23210	COG0557	exoribonuclease II activity
PMF13cell1_RS23215	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
PMF13cell1_RS23220	COG0148	phosphopyruvate hydratase activity
PMF13cell1_RS23255	COG4977	sequence-specific DNA binding
PMF13cell1_RS23260	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMF13cell1_RS23265	COG1126	abc transporter atp-binding protein
PMF13cell1_RS23285	COG0149	triose-phosphate isomerase activity
PMF13cell1_RS23300	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
PMF13cell1_RS23310	COG0482	sulfurtransferase activity
PMF13cell1_RS23315	COG0822	iron-sulfur transferase activity
PMF13cell1_RS23325	COG1959	2 iron, 2 sulfur cluster binding
PMF13cell1_RS23330	COG2244	polysaccharide biosynthetic process
PMF13cell1_RS23335	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PMF13cell1_RS23340	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS23350	COG1418	mRNA catabolic process
PMF13cell1_RS23360	COG2137	regulation of response to DNA damage stimulus
PMF13cell1_RS23365	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PMF13cell1_RS23385	COG1136	(ABC) transporter
PMF13cell1_RS23395	COG0446	pyridine nucleotide-disulphide oxidoreductase
PMF13cell1_RS23400	COG5002	protein histidine kinase activity
PMF13cell1_RS23405	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS23410	COG0297	glycogen (starch) synthase activity
PMF13cell1_RS23415	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS23420	COG0750	zinc metalloprotease
PMF13cell1_RS23425	COG0497	DNA recombination
PMF13cell1_RS23430	COG1438	arginine binding
PMF13cell1_RS23435	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PMF13cell1_RS23440	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
PMF13cell1_RS23445	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PMF13cell1_RS23455	COG1722	exodeoxyribonuclease VII activity
PMF13cell1_RS23460	COG1570	exodeoxyribonuclease VII activity
PMF13cell1_RS23465	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PMF13cell1_RS23470	COG1302	Protein conserved in bacteria
PMF13cell1_RS23500	COG2894	cell division
PMF13cell1_RS23510	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PMF13cell1_RS23550	COG3854	ATPases associated with a variety of cellular activities
PMF13cell1_RS23565	COG1609	Transcriptional regulator
PMF13cell1_RS23565	COG2207	Transcriptional regulator
PMF13cell1_RS23570	COG0789	Transcriptional regulator
PMF13cell1_RS23575	COG0667	Aldo Keto reductase
PMF13cell1_RS23585	COG0210	DNA helicase
PMF13cell1_RS23590	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PMF13cell1_RS23610	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS23615	COG1175	transmembrane transport
PMF13cell1_RS23620	COG1653	transport
PMF13cell1_RS23625	COG1609	Transcriptional regulator
PMF13cell1_RS23625	COG2207	Transcriptional regulator
PMF13cell1_RS23630	COG2080	2 iron, 2 sulfur cluster binding
PMF13cell1_RS23635	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
PMF13cell1_RS23640	COG1529	Aldehyde oxidase and xanthine dehydrogenase
PMF13cell1_RS23655	COG1501	Belongs to the glycosyl hydrolase 31 family
PMF13cell1_RS23660	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS23665	COG1175	transmembrane transport
PMF13cell1_RS23670	COG2972	Histidine kinase
PMF13cell1_RS23675	COG4753	response regulator
PMF13cell1_RS23675	COG2207	Transcriptional regulator
PMF13cell1_RS23695	COG2070	2-Nitropropane dioxygenase
PMF13cell1_RS23705	COG0439	Biotin carboxylase
PMF13cell1_RS23710	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PMF13cell1_RS23715	COG0511	ligase activity, forming carbon-carbon bonds
PMF13cell1_RS23720	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
PMF13cell1_RS23730	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
PMF13cell1_RS23735	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMF13cell1_RS23740	COG0772	Belongs to the SEDS family
PMF13cell1_RS23745	COG0584	glycerophosphoryl diester phosphodiesterase
PMF13cell1_RS23775	COG3546	catalase activity
PMF13cell1_RS23795	COG1028	Short-chain dehydrogenase reductase Sdr
PMF13cell1_RS23800	COG1063	alcohol dehydrogenase
PMF13cell1_RS23805	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PMF13cell1_RS23805	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PMF13cell1_RS23815	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PMF13cell1_RS23820	COG4948	Mandelate Racemase Muconate Lactonizing
PMF13cell1_RS23835	COG2207	Transcriptional regulator
PMF13cell1_RS23835	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS23865	COG3546	catalase activity
PMF13cell1_RS23870	COG2032	superoxide dismutase activity
PMF13cell1_RS23880	COG1979	alcohol dehydrogenase
PMF13cell1_RS23895	COG1501	Belongs to the glycosyl hydrolase 31 family
PMF13cell1_RS23905	COG0513	Belongs to the DEAD box helicase family
PMF13cell1_RS23915	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PMF13cell1_RS23925	COG2378	regulation of single-species biofilm formation
PMF13cell1_RS23935	COG1285	pathogenesis
PMF13cell1_RS23945	COG0688	phosphatidylethanolamine metabolic process
PMF13cell1_RS23950	COG1183	phosphatidylcholine synthase activity
PMF13cell1_RS23970	COG1609	Transcriptional regulator
PMF13cell1_RS23980	COG4977	sequence-specific DNA binding
PMF13cell1_RS23980	COG1917	Cupin 2, conserved barrel domain protein
PMF13cell1_RS23985	COG0574	Belongs to the PEP-utilizing enzyme family
PMF13cell1_RS23985	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMF13cell1_RS23990	COG4989	oxidoreductase activity
PMF13cell1_RS24000	COG3681	Belongs to the UPF0597 family
PMF13cell1_RS24005	COG2207	Transcriptional regulator
PMF13cell1_RS24005	COG4753	response regulator
PMF13cell1_RS24010	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS24015	COG1175	transmembrane transport
PMF13cell1_RS24020	COG1653	transport
PMF13cell1_RS24030	COG2972	Histidine kinase
PMF13cell1_RS24035	COG0205	6-phosphofructokinase activity
PMF13cell1_RS24060	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS24065	COG1175	transmembrane transport
PMF13cell1_RS24070	COG1653	transport
PMF13cell1_RS24075	COG1621	beta-fructofuranosidase activity
PMF13cell1_RS24080	COG1609	Transcriptional regulator
PMF13cell1_RS24085	COG0423	glycine-tRNA ligase activity
PMF13cell1_RS24090	COG1381	Involved in DNA repair and RecF pathway recombination
PMF13cell1_RS24095	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PMF13cell1_RS24115	COG0584	glycerophosphoryl diester phosphodiesterase
PMF13cell1_RS24130	COG1959	2 iron, 2 sulfur cluster binding
PMF13cell1_RS24135	COG0488	(ABC) transporter
PMF13cell1_RS24140	COG0019	diaminopimelate decarboxylase activity
PMF13cell1_RS24145	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS24160	COG1846	Transcriptional regulator
PMF13cell1_RS24175	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMF13cell1_RS24180	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMF13cell1_RS24185	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PMF13cell1_RS24190	COG0753	catalase activity
PMF13cell1_RS24210	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
PMF13cell1_RS24215	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMF13cell1_RS24220	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMF13cell1_RS24225	COG1187	pseudouridine synthase activity
PMF13cell1_RS24230	COG0726	polysaccharide deacetylase
PMF13cell1_RS24250	COG3344	reverse transcriptase
PMF13cell1_RS24255	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS24260	COG0582	viral genome integration into host DNA
PMF13cell1_RS24265	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS24280	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMF13cell1_RS24285	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
PMF13cell1_RS24290	COG0372	Belongs to the citrate synthase family
PMF13cell1_RS24295	COG0640	Transcriptional regulator
PMF13cell1_RS24305	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
PMF13cell1_RS24310	COG1132	(ABC) transporter
PMF13cell1_RS24325	COG0534	Mate efflux family protein
PMF13cell1_RS24335	COG0436	Aminotransferase
PMF13cell1_RS24340	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PMF13cell1_RS24345	COG4608	Belongs to the ABC transporter superfamily
PMF13cell1_RS24350	COG0444	Belongs to the ABC transporter superfamily
PMF13cell1_RS24355	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMF13cell1_RS24375	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMF13cell1_RS24385	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PMF13cell1_RS24390	COG1363	Peptidase, m42
PMF13cell1_RS24410	COG2197	response regulator
PMF13cell1_RS24415	COG3275	phosphorelay sensor kinase activity
PMF13cell1_RS24420	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS24425	COG1175	transmembrane transport
PMF13cell1_RS24430	COG1653	transport
PMF13cell1_RS24435	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS24440	COG1191	sigma factor activity
PMF13cell1_RS24455	COG1968	undecaprenyl-diphosphatase activity
PMF13cell1_RS24460	COG3534	alpha-L-arabinofuranosidase
PMF13cell1_RS24475	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMF13cell1_RS24485	COG0800	Aldolase
PMF13cell1_RS24490	COG1414	Transcriptional regulator
PMF13cell1_RS24495	COG1191	sigma factor activity
PMF13cell1_RS24505	COG0710	3-dehydroquinate dehydratase activity
PMF13cell1_RS24510	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMF13cell1_RS24525	COG0521	Mo-molybdopterin cofactor biosynthetic process
PMF13cell1_RS24545	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMF13cell1_RS24550	COG0772	Belongs to the SEDS family
PMF13cell1_RS24555	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PMF13cell1_RS24565	COG0768	penicillin binding
PMF13cell1_RS24570	COG0768	penicillin binding
PMF13cell1_RS24585	COG2001	Belongs to the MraZ family
PMF13cell1_RS24600	COG0012	GTP binding
PMF13cell1_RS24605	COG1564	THIamine pyrophosphokinase
PMF13cell1_RS24610	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
PMF13cell1_RS24625	COG0631	protein serine/threonine phosphatase activity
PMF13cell1_RS24630	COG0820	rRNA (adenine-C2-)-methyltransferase activity
PMF13cell1_RS24650	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PMF13cell1_RS24655	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PMF13cell1_RS24660	COG0549	Belongs to the carbamate kinase family
PMF13cell1_RS24680	COG0446	pyridine nucleotide-disulphide oxidoreductase
PMF13cell1_RS24680	COG1902	pentaerythritol trinitrate reductase activity
PMF13cell1_RS24685	COG1968	undecaprenyl-diphosphatase activity
PMF13cell1_RS24720	COG1368	sulfuric ester hydrolase activity
PMF13cell1_RS24740	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PMF13cell1_RS24750	COG1134	teichoic acid transport
PMF13cell1_RS24760	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
PMF13cell1_RS24765	COG1216	Glycosyl transferase, family 2
PMF13cell1_RS24770	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PMF13cell1_RS24775	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PMF13cell1_RS24775	COG0463	Glycosyl transferase, family 2
PMF13cell1_RS24785	COG1216	Glycosyl transferase, family 2
PMF13cell1_RS24790	COG1216	Glycosyl transferase, family 2
PMF13cell1_RS24790	COG0438	transferase activity, transferring glycosyl groups
PMF13cell1_RS24795	COG0463	Glycosyl transferase, family 2
PMF13cell1_RS24805	COG1216	Glycosyl transferase, family 2
PMF13cell1_RS24805	COG0438	transferase activity, transferring glycosyl groups
PMF13cell1_RS24830	COG1682	transport, permease protein
PMF13cell1_RS24835	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
PMF13cell1_RS24840	COG1686	Belongs to the peptidase S11 family
PMF13cell1_RS24870	COG3475	LICD family
PMF13cell1_RS24875	COG0562	UDP-galactopyranose mutase
PMF13cell1_RS24880	COG1442	glycosyl transferase family 8
PMF13cell1_RS24895	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PMF13cell1_RS24910	COG0463	Glycosyl transferase, family 2
PMF13cell1_RS24920	COG0151	Belongs to the GarS family
PMF13cell1_RS24925	COG1376	ErfK ybiS ycfS ynhG family protein
PMF13cell1_RS24950	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PMF13cell1_RS24965	COG1040	competence protein
PMF13cell1_RS24970	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
PMF13cell1_RS25000	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PMF13cell1_RS25005	COG0481	GTPase activity
PMF13cell1_RS25015	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PMF13cell1_RS25020	COG0268	Binds directly to 16S ribosomal RNA
PMF13cell1_RS25040	COG5002	protein histidine kinase activity
PMF13cell1_RS25045	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS25050	COG0322	excinuclease ABC activity
PMF13cell1_RS25060	COG1459	type II secretion system
PMF13cell1_RS25090	COG1476	TRANSCRIPTIONal
PMF13cell1_RS25115	COG0305	Participates in initiation and elongation during chromosome replication
PMF13cell1_RS25120	COG0359	binds to the 23S rRNA
PMF13cell1_RS25125	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
PMF13cell1_RS25145	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PMF13cell1_RS25150	COG0629	single-stranded DNA binding
PMF13cell1_RS25155	COG0360	Binds together with S18 to 16S ribosomal RNA
PMF13cell1_RS25170	COG4509	Sortase family
PMF13cell1_RS25185	COG1472	Belongs to the glycosyl hydrolase 3 family
PMF13cell1_RS25195	COG0366	Alpha amylase catalytic
PMF13cell1_RS25205	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS25210	COG1408	metallophosphoesterase
PMF13cell1_RS25215	COG0275	rRNA processing
PMF13cell1_RS25240	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS25245	COG1175	transmembrane transport
PMF13cell1_RS25255	COG4753	response regulator
PMF13cell1_RS25255	COG2207	Transcriptional regulator
PMF13cell1_RS25260	COG2972	Histidine kinase
PMF13cell1_RS25290	COG0110	maltose O-acetyltransferase activity
PMF13cell1_RS25300	COG0151	Belongs to the GarS family
PMF13cell1_RS25310	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PMF13cell1_RS25315	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PMF13cell1_RS25335	COG3250	beta-galactosidase activity
PMF13cell1_RS25340	COG0667	Aldo Keto reductase
PMF13cell1_RS25350	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS25355	COG1175	transmembrane transport
PMF13cell1_RS25365	COG2972	Histidine kinase
PMF13cell1_RS25370	COG2207	Transcriptional regulator
PMF13cell1_RS25370	COG4753	response regulator
PMF13cell1_RS25375	COG1268	BioY protein
PMF13cell1_RS25395	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
PMF13cell1_RS25410	COG0295	cytidine deaminase activity
PMF13cell1_RS25425	COG1744	ABC transporter substrate-binding protein PnrA-like
PMF13cell1_RS25430	COG1079	Belongs to the binding-protein-dependent transport system permease family
PMF13cell1_RS25435	COG4603	Belongs to the binding-protein-dependent transport system permease family
PMF13cell1_RS25440	COG3845	ABC transporter
PMF13cell1_RS25445	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
PMF13cell1_RS25450	COG2188	Transcriptional regulator
PMF13cell1_RS25455	COG1501	Belongs to the glycosyl hydrolase 31 family
PMF13cell1_RS25465	COG4974	Belongs to the 'phage' integrase family
PMF13cell1_RS25470	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
PMF13cell1_RS25475	COG3835	regulator
PMF13cell1_RS25480	COG2211	Major facilitator Superfamily
PMF13cell1_RS25495	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS25505	COG0697	spore germination
PMF13cell1_RS25510	COG1115	amino acid carrier protein
PMF13cell1_RS25515	COG0686	Belongs to the AlaDH PNT family
PMF13cell1_RS25560	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
PMF13cell1_RS25590	COG0151	Belongs to the GarS family
PMF13cell1_RS25595	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PMF13cell1_RS25610	COG0582	viral genome integration into host DNA
PMF13cell1_RS25615	COG5001	Diguanylate cyclase
PMF13cell1_RS25615	COG2203	Gaf domain
PMF13cell1_RS25615	COG4251	negative regulation of phosphorylation
PMF13cell1_RS25615	COG3706	GGDEF domain
PMF13cell1_RS25625	COG2972	Histidine kinase
PMF13cell1_RS25630	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS25635	COG1175	transmembrane transport
PMF13cell1_RS25645	COG3507	Belongs to the glycosyl hydrolase 43 family
PMF13cell1_RS25650	COG1132	(ABC) transporter
PMF13cell1_RS25655	COG1132	(ABC) transporter
PMF13cell1_RS25660	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PMF13cell1_RS25680	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMF13cell1_RS25685	COG3958	Transketolase
PMF13cell1_RS25690	COG3959	Transketolase, thiamine diphosphate binding domain
PMF13cell1_RS25700	COG1609	Transcriptional regulator
PMF13cell1_RS25710	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS25715	COG1175	transmembrane transport
PMF13cell1_RS25730	COG1609	Transcriptional regulator
PMF13cell1_RS25735	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PMF13cell1_RS25745	COG1346	cytolysis
PMF13cell1_RS25760	COG1874	Beta-galactosidase
PMF13cell1_RS25765	COG3250	beta-galactosidase activity
PMF13cell1_RS25785	COG3708	Transcriptional regulator
PMF13cell1_RS25785	COG2207	Transcriptional regulator
PMF13cell1_RS25790	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PMF13cell1_RS25805	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PMF13cell1_RS25810	COG0367	asparagine synthase
PMF13cell1_RS25815	COG1720	tRNA m6t6A37 methyltransferase activity
PMF13cell1_RS25830	COG2199	diguanylate cyclase activity
PMF13cell1_RS25880	COG1131	(ABC) transporter
PMF13cell1_RS25890	COG1131	(ABC) transporter
PMF13cell1_RS25900	COG1595	DNA-templated transcription, initiation
PMF13cell1_RS25905	COG1288	antiporter activity
PMF13cell1_RS25910	COG1288	antiporter activity
PMF13cell1_RS25935	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS25940	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS25955	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS25960	COG1609	Transcriptional regulator
PMF13cell1_RS25970	COG1136	(ABC) transporter
PMF13cell1_RS25985	COG2972	Histidine kinase
PMF13cell1_RS25990	COG4753	response regulator
PMF13cell1_RS25990	COG2207	Transcriptional regulator
PMF13cell1_RS25995	COG4211	Belongs to the binding-protein-dependent transport system permease family
PMF13cell1_RS26000	COG1129	ABC transporter
PMF13cell1_RS26005	COG1879	ABC-type sugar transport system periplasmic component
PMF13cell1_RS26010	COG1136	(ABC) transporter
PMF13cell1_RS26010	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS26040	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS26045	COG1175	transmembrane transport
PMF13cell1_RS26055	COG1609	Transcriptional regulator
PMF13cell1_RS26070	COG0402	S-adenosylhomocysteine deaminase activity
PMF13cell1_RS26075	COG0251	oxidation-reduction process
PMF13cell1_RS26105	COG5598	trimethylamine methyltransferase
PMF13cell1_RS26110	COG1414	Transcriptional regulator
PMF13cell1_RS26120	COG5598	trimethylamine methyltransferase
PMF13cell1_RS26125	COG5012	cobalamin binding
PMF13cell1_RS26130	COG2207	Transcriptional regulator
PMF13cell1_RS26135	COG2738	Putative neutral zinc metallopeptidase
PMF13cell1_RS26150	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
PMF13cell1_RS26165	COG2205	protein histidine kinase activity
PMF13cell1_RS26170	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS26195	COG1131	(ABC) transporter
PMF13cell1_RS26210	COG1136	(ABC) transporter
PMF13cell1_RS26210	COG0577	efflux transmembrane transporter activity
PMF13cell1_RS26250	COG1131	(ABC) transporter
PMF13cell1_RS26260	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
PMF13cell1_RS26275	COG1131	(ABC) transporter
PMF13cell1_RS26285	COG1595	DNA-templated transcription, initiation
PMF13cell1_RS26325	COG2508	Transcriptional regulator
PMF13cell1_RS26325	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PMF13cell1_RS26345	COG4753	response regulator
PMF13cell1_RS26345	COG2207	Transcriptional regulator
PMF13cell1_RS26350	COG2972	Histidine kinase
PMF13cell1_RS26360	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS26395	COG2205	protein histidine kinase activity
PMF13cell1_RS26410	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS26415	COG3250	beta-galactosidase activity
PMF13cell1_RS26430	COG0242	peptide deformylase activity
PMF13cell1_RS26495	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
PMF13cell1_RS26505	COG1234	tRNA 3'-trailer cleavage
PMF13cell1_RS26515	COG0456	acetyltransferase
PMF13cell1_RS26520	COG1214	PFAM Peptidase M22, glycoprotease
PMF13cell1_RS26525	COG0802	atpase or kinase
PMF13cell1_RS26530	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PMF13cell1_RS26535	COG1739	Uncharacterized protein family UPF0029
PMF13cell1_RS26560	COG4948	Mandelate Racemase Muconate Lactonizing
PMF13cell1_RS26565	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS26570	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS26575	COG1175	transmembrane transport
PMF13cell1_RS26585	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS26595	COG1940	carbohydrate kinase activity
PMF13cell1_RS26600	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PMF13cell1_RS26605	COG0322	excinuclease ABC activity
PMF13cell1_RS26615	COG4868	Belongs to the UPF0371 family
PMF13cell1_RS26620	COG2801	Transposase and inactivated derivatives
PMF13cell1_RS26630	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
PMF13cell1_RS26650	COG0363	glucosamine-6-phosphate deaminase activity
PMF13cell1_RS26655	COG1668	transmembrane transport
PMF13cell1_RS26660	COG4152	abc transporter atp-binding protein
PMF13cell1_RS26670	COG1476	TRANSCRIPTIONal
PMF13cell1_RS26680	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PMF13cell1_RS26690	COG2217	Heavy metal translocating P-type atpase
PMF13cell1_RS26700	COG0569	domain protein
PMF13cell1_RS26710	COG3546	catalase activity
PMF13cell1_RS26735	COG5002	protein histidine kinase activity
PMF13cell1_RS26745	COG1283	sodium-dependent phosphate transmembrane transporter activity
PMF13cell1_RS26750	COG0456	acetyltransferase
PMF13cell1_RS26755	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS26760	COG4753	response regulator
PMF13cell1_RS26760	COG2207	Transcriptional regulator
PMF13cell1_RS26765	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS26770	COG1175	transmembrane transport
PMF13cell1_RS26780	COG2972	Histidine kinase
PMF13cell1_RS26795	COG1827	regulation of RNA biosynthetic process
PMF13cell1_RS26800	COG0157	Belongs to the NadC ModD family
PMF13cell1_RS26810	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PMF13cell1_RS26825	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
PMF13cell1_RS26830	COG0534	Mate efflux family protein
PMF13cell1_RS26860	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS26865	COG2205	protein histidine kinase activity
PMF13cell1_RS26895	COG2205	protein histidine kinase activity
PMF13cell1_RS26900	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PMF13cell1_RS26905	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PMF13cell1_RS26910	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PMF13cell1_RS26935	COG1285	pathogenesis
PMF13cell1_RS26940	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PMF13cell1_RS26955	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PMF13cell1_RS27030	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PMF13cell1_RS27045	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PMF13cell1_RS27050	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMF13cell1_RS27065	COG1063	alcohol dehydrogenase
PMF13cell1_RS27075	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS27080	COG1175	transmembrane transport
PMF13cell1_RS27090	COG1063	alcohol dehydrogenase
PMF13cell1_RS27095	COG1869	D-ribose catabolic process
PMF13cell1_RS27100	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS27105	COG1609	Transcriptional regulator
PMF13cell1_RS27110	COG1940	carbohydrate kinase activity
PMF13cell1_RS27115	COG0572	uridine kinase
PMF13cell1_RS27130	COG2252	PERMEase
PMF13cell1_RS27140	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS27145	COG1063	alcohol dehydrogenase
PMF13cell1_RS27165	COG2972	Histidine kinase
PMF13cell1_RS27170	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS27175	COG1175	transmembrane transport
PMF13cell1_RS27180	COG1653	transport
PMF13cell1_RS27205	COG1131	(ABC) transporter
PMF13cell1_RS27225	COG3290	protein histidine kinase activity
PMF13cell1_RS27230	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS27270	COG5001	Diguanylate cyclase
PMF13cell1_RS27270	COG3706	GGDEF domain
PMF13cell1_RS27270	COG4251	negative regulation of phosphorylation
PMF13cell1_RS27270	COG2203	Gaf domain
PMF13cell1_RS27275	COG1215	transferase activity, transferring glycosyl groups
PMF13cell1_RS27310	COG1687	branched-chain amino acid
PMF13cell1_RS27315	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
PMF13cell1_RS27340	COG1121	(ABC) transporter
PMF13cell1_RS27350	COG1595	DNA-templated transcription, initiation
PMF13cell1_RS27355	COG3620	sequence-specific DNA binding
PMF13cell1_RS27380	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PMF13cell1_RS27385	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PMF13cell1_RS27390	COG2706	6-phosphogluconolactonase activity
PMF13cell1_RS27395	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PMF13cell1_RS27410	COG0454	-acetyltransferase
PMF13cell1_RS27435	COG0596	Alpha beta hydrolase
PMF13cell1_RS27435	COG2945	thiolester hydrolase activity
PMF13cell1_RS27455	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMF13cell1_RS27460	COG3481	metal-dependent phosphohydrolase, HD sub domain
PMF13cell1_RS27465	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PMF13cell1_RS27470	COG1193	negative regulation of DNA recombination
PMF13cell1_RS27475	COG0745	RESPONSE REGULATOR receiver
PMF13cell1_RS27480	COG5002	protein histidine kinase activity
PMF13cell1_RS27490	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMF13cell1_RS27500	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PMF13cell1_RS27525	COG0475	glutathione-regulated potassium exporter activity
PMF13cell1_RS27530	COG1328	CTP reductase activity
PMF13cell1_RS27530	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMF13cell1_RS27535	COG0534	Mate efflux family protein
PMF13cell1_RS27540	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PMF13cell1_RS27550	COG0446	pyridine nucleotide-disulphide oxidoreductase
PMF13cell1_RS27555	COG0583	DNA-binding transcription factor activity
PMF13cell1_RS27560	COG1773	rubredoxin
PMF13cell1_RS27570	COG1757	Na H antiporter
PMF13cell1_RS27575	COG2986	histidine ammonia-lyase
PMF13cell1_RS27605	COG1175	transmembrane transport
PMF13cell1_RS27610	COG1653	transport
PMF13cell1_RS27620	COG2223	nitrite transmembrane transporter activity
PMF13cell1_RS27630	COG2223	nitrite transmembrane transporter activity
PMF13cell1_RS27635	COG1349	DNA-binding transcription factor activity
PMF13cell1_RS27645	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS27665	COG0730	response to heat
PMF13cell1_RS27670	COG1082	Xylose isomerase domain protein TIM barrel
PMF13cell1_RS27675	COG2197	response regulator
PMF13cell1_RS27680	COG2972	Histidine kinase
PMF13cell1_RS27685	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS27695	COG2211	Major facilitator Superfamily
PMF13cell1_RS27715	COG3962	Belongs to the TPP enzyme family
PMF13cell1_RS27720	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMF13cell1_RS27730	COG1063	alcohol dehydrogenase
PMF13cell1_RS27735	COG0673	inositol 2-dehydrogenase activity
PMF13cell1_RS27740	COG0395	ABC-type sugar transport system, permease component
PMF13cell1_RS27745	COG1175	transmembrane transport
PMF13cell1_RS27755	COG1609	Transcriptional regulator
PMF13cell1_RS27765	COG2508	Transcriptional regulator
PMF13cell1_RS28055	COG0582	viral genome integration into host DNA
PMF13cell1_RS28075	COG4824	toxin secretion phage lysis holin