locus-tag	class	description
M9396_RS00005	PF07478	D-ala D-ala ligase C-terminus
M9396_RS00005	PF01820	D-ala D-ala ligase N-terminus
M9396_RS00015	PF01386	Ribosomal L25p family
M9396_RS00020	PF01227	GTP cyclohydrolase I
M9396_RS00030	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
M9396_RS00030	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
M9396_RS00035	PF01502	Phosphoribosyl-AMP cyclohydrolase
M9396_RS00035	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
M9396_RS00040	PF00977	Histidine biosynthesis protein
M9396_RS00045	PF00977	Histidine biosynthesis protein
M9396_RS00055	PF00475	Imidazoleglycerol-phosphate dehydratase
M9396_RS00055	PF08645	Polynucleotide kinase 3 phosphatase
M9396_RS00060	PF00155	Aminotransferase class I and II
M9396_RS00065	PF00815	Histidinol dehydrogenase
M9396_RS00070	PF01634	ATP phosphoribosyltransferase
M9396_RS00070	PF08029	HisG, C-terminal domain
M9396_RS00075	PF08411	Exonuclease C-terminal
M9396_RS00075	PF00929	Exonuclease
M9396_RS00080	PF04363	Protein of unknown function (DUF496)
M9396_RS00085	PF00571	CBS domain
M9396_RS00085	PF01380	SIS domain
M9396_RS00105	PF07690	Major Facilitator Superfamily
M9396_RS00110	PF03023	Lipid II flippase MurJ
M9396_RS00115	PF03485	Arginyl tRNA synthetase N terminal domain
M9396_RS00115	PF05746	DALR anticodon binding domain
M9396_RS00115	PF00750	tRNA synthetases class I (R)
M9396_RS00120	PF01336	OB-fold nucleic acid binding domain
M9396_RS00120	PF00152	tRNA synthetases class II (D, K and N) 
M9396_RS00120	PF02938	GAD domain
M9396_RS00125	PF01476	LysM domain
M9396_RS00125	PF08525	Opacity-associated protein A N-terminal motif
M9396_RS00125	PF01551	Peptidase family M23
M9396_RS00130	PF00224	Pyruvate kinase, barrel domain
M9396_RS00130	PF02887	Pyruvate kinase, alpha/beta domain
M9396_RS00135	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
M9396_RS00135	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
M9396_RS00140	PF01435	Peptidase family M48
M9396_RS00145	PF00313	'Cold-shock' DNA-binding domain
M9396_RS00150	PF03613	PTS system mannose/fructose/sorbose family IID component
M9396_RS00155	PF03609	PTS system sorbose-specific iic component
M9396_RS00160	PF03830	PTS system sorbose subfamily IIB component
M9396_RS00160	PF03610	PTS system fructose IIA component
M9396_RS00165	PF03471	Transporter associated domain
M9396_RS00165	PF03741	Integral membrane protein TerC family
M9396_RS00170	PF04715	Anthranilate synthase component I, N terminal region
M9396_RS00170	PF00425	chorismate binding enzyme
M9396_RS00175	PF00814	Glycoprotease family
M9396_RS00180	PF03776	Septum formation topological specificity factor MinE
M9396_RS00185	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
M9396_RS00190	PF03775	Septum formation inhibitor MinC, C-terminal domain
M9396_RS00190	PF05209	Septum formation inhibitor MinC, N-terminal domain
M9396_RS00195	PF02600	Disulfide bond formation protein DsbB
M9396_RS00200	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
M9396_RS00200	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
M9396_RS00205	PF01343	Peptidase family S49
M9396_RS00210	PF03372	Endonuclease/Exonuclease/phosphatase family
M9396_RS00215	PF00816	H-NS histone family
M9396_RS00220	PF00265	Thymidine kinase
M9396_RS00225	PF13091	PLD-like domain
M9396_RS00225	PF13396	Phospholipase_D-nuclease N-terminal
M9396_RS00240	PF00290	Tryptophan synthase alpha chain
M9396_RS00245	PF00291	Pyridoxal-phosphate dependent enzyme
M9396_RS00250	PF00218	Indole-3-glycerol phosphate synthase
M9396_RS00250	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
M9396_RS00255	PF02885	Glycosyl transferase family, helical bundle domain
M9396_RS00255	PF00591	Glycosyl transferase family, a/b domain
M9396_RS00260	PF02885	Glycosyl transferase family, helical bundle domain
M9396_RS00260	PF00591	Glycosyl transferase family, a/b domain
M9396_RS00260	PF00117	Glutamine amidotransferase class-I
M9396_RS00265	PF04715	Anthranilate synthase component I, N terminal region
M9396_RS00265	PF00425	chorismate binding enzyme
M9396_RS00270	PF00925	GTP cyclohydrolase II
M9396_RS00280	PF00753	Metallo-beta-lactamase superfamily
M9396_RS00285	PF00155	Aminotransferase class I and II
M9396_RS00290	PF00152	tRNA synthetases class II (D, K and N) 
M9396_RS00290	PF01336	OB-fold nucleic acid binding domain
M9396_RS00295	PF07977	FabA-like domain
M9396_RS00300	PF08755	Hemimethylated DNA-binding protein YccV like
M9396_RS00305	PF04358	DsrC like protein
M9396_RS00320	PF01066	CDP-alcohol phosphatidyltransferase
M9396_RS00335	PF17969	L,D-transpeptidase C-terminal domain
M9396_RS00335	PF03734	L,D-transpeptidase catalytic domain
M9396_RS00340	PF03734	L,D-transpeptidase catalytic domain
M9396_RS00340	PF17969	L,D-transpeptidase C-terminal domain
M9396_RS00345	PF03279	Bacterial lipid A biosynthesis acyltransferase
M9396_RS00350	PF12111	Polyribonucleotide phosphorylase C terminal
M9396_RS00350	PF10150	Ribonuclease E/G family
M9396_RS00350	PF00575	S1 RNA binding domain
M9396_RS00355	PF00849	RNA pseudouridylate synthase
M9396_RS00355	PF01479	S4 domain
M9396_RS00360	PF01783	Ribosomal L32p protein family
M9396_RS00365	PF02504	Fatty acid synthesis protein
M9396_RS00370	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
M9396_RS00370	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
M9396_RS00375	PF00698	Acyl transferase domain
M9396_RS00385	PF00550	Phosphopantetheine attachment site
M9396_RS00390	PF01063	Amino-transferase class IV
M9396_RS00395	PF02223	Thymidylate kinase
M9396_RS00400	PF09115	DNA polymerase III, delta subunit, C terminal
M9396_RS00405	PF01026	TatD related DNase
M9396_RS00410	PF01230	HIT domain
M9396_RS00415	PF13036	Peptidoglycan-synthase activator LpoB
M9396_RS00420	PF02687	FtsX-like permease family
M9396_RS00420	PF12704	MacB-like periplasmic core domain
M9396_RS00425	PF00005	ABC transporter
M9396_RS00430	PF02687	FtsX-like permease family
M9396_RS00430	PF12704	MacB-like periplasmic core domain
M9396_RS00435	PF08328	Adenylosuccinate lyase C-terminal
M9396_RS00435	PF00206	Lyase
M9396_RS00445	PF02742	Iron dependent repressor, metal binding and dimerisation domain
M9396_RS00445	PF01325	Iron dependent repressor, N-terminal DNA binding domain
M9396_RS00450	PF01464	Transglycosylase SLT domain
M9396_RS00465	PF01176	Translation initiation factor 1A / IF-1
M9396_RS00470	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M9396_RS00475	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
M9396_RS00475	PF17854	FtsK alpha domain
M9396_RS00475	PF09397	Ftsk gamma domain
M9396_RS00475	PF01580	FtsK/SpoIIIE family
M9396_RS00480	PF03548	Outer membrane lipoprotein carrier protein LolA
M9396_RS00485	PF02403	Seryl-tRNA synthetase N-terminal domain
M9396_RS00485	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
M9396_RS00490	PF00266	Aminotransferase class-V
M9396_RS00495	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
M9396_RS00500	PF02224	Cytidylate kinase
M9396_RS00505	PF00575	S1 RNA binding domain
M9396_RS00510	PF00005	ABC transporter
M9396_RS00510	PF00664	ABC transporter transmembrane region
M9396_RS00515	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
M9396_RS00520	PF03966	Trm112p-like protein
M9396_RS00525	PF02348	Cytidylyltransferase
M9396_RS00530	PF02441	Flavoprotein
M9396_RS00540	PF10415	Fumarase C C-terminus
M9396_RS00540	PF00206	Lyase
M9396_RS00545	PF10576	Iron-sulfur binding domain of endonuclease III
M9396_RS00545	PF00633	Helix-hairpin-helix motif
M9396_RS00545	PF00730	HhH-GPD superfamily base excision DNA repair protein
M9396_RS00550	PF00579	tRNA synthetases class I (W and Y)
M9396_RS00555	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
M9396_RS00555	PF01243	Pyridoxamine 5'-phosphate oxidase
M9396_RS00560	PF01047	MarR family
M9396_RS00565	PF00929	Exonuclease
M9396_RS00570	PF00462	Glutaredoxin
M9396_RS00575	PF00677	Lumazine binding domain
M9396_RS00585	PF04728	Lipoprotein leucine-zipper
M9396_RS00590	PF02657	Fe-S metabolism associated domain
M9396_RS00595	PF00266	Aminotransferase class-V
M9396_RS00600	PF01458	Uncharacterized protein family (UPF0051)
M9396_RS00605	PF00005	ABC transporter
M9396_RS00610	PF01458	Uncharacterized protein family (UPF0051)
M9396_RS00615	PF01521	Iron-sulphur cluster biosynthesis
M9396_RS00620	PF03099	Biotin/lipoate A/B protein ligase family
M9396_RS00620	PF10437	Bacterial lipoate protein ligase C-terminus
M9396_RS00625	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
M9396_RS00625	PF01588	Putative tRNA binding domain
M9396_RS00625	PF03484	tRNA synthetase B5 domain
M9396_RS00625	PF03483	B3/4 domain
M9396_RS00625	PF03147	Ferredoxin-fold anticodon binding domain
M9396_RS00630	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
M9396_RS00630	PF01409	tRNA synthetases class II core domain (F)
M9396_RS00635	PF00453	Ribosomal protein L20
M9396_RS00640	PF01632	Ribosomal protein L35
M9396_RS00645	PF00707	Translation initiation factor IF-3, C-terminal domain
M9396_RS00645	PF05198	Translation initiation factor IF-3, N-terminal domain
M9396_RS00650	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
M9396_RS00650	PF03129	Anticodon binding domain
M9396_RS00650	PF02824	TGS domain
M9396_RS00650	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
M9396_RS00655	PF00793	DAHP synthetase I family
M9396_RS00660	PF13847	Methyltransferase domain
M9396_RS00660	PF17827	PrmC N-terminal domain
M9396_RS00665	PF03462	PCRF domain
M9396_RS00665	PF00472	RF-1 domain
M9396_RS00675	PF08544	GHMP kinases C terminal 
M9396_RS00675	PF00288	GHMP kinases N terminal domain
M9396_RS00680	PF14572	Phosphoribosyl synthetase-associated domain
M9396_RS00680	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
M9396_RS00685	PF01195	Peptidyl-tRNA hydrolase
M9396_RS00690	PF01926	50S ribosome-binding GTPase
M9396_RS00690	PF06071	Protein of unknown function (DUF933)
M9396_RS00695	PF01027	Inhibitor of apoptosis-promoting Bax1
M9396_RS00700	PF00300	Histidine phosphatase superfamily (branch 1)
M9396_RS00705	PF10282	Lactonase, 7-bladed beta-propeller
M9396_RS00710	PF16331	TolA binding protein trimerisation
M9396_RS00710	PF13174	Tetratricopeptide repeat
M9396_RS00715	PF00691	OmpA family
M9396_RS00720	PF07676	WD40-like Beta Propeller Repeat
M9396_RS00720	PF04052	TolB amino-terminal domain
M9396_RS00730	PF02472	Biopolymer transport protein ExbD/TolR
M9396_RS00735	PF01618	MotA/TolQ/ExbB proton channel family
M9396_RS00740	PF02629	CoA binding domain
M9396_RS00740	PF00549	CoA-ligase
M9396_RS00745	PF08442	ATP-grasp domain
M9396_RS00745	PF00549	CoA-ligase
M9396_RS00750	PF00364	Biotin-requiring enzyme
M9396_RS00750	PF02817	e3 binding domain
M9396_RS00750	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
M9396_RS00755	PF16078	2-oxoglutarate dehydrogenase N-terminus
M9396_RS00755	PF00676	Dehydrogenase E1 component
M9396_RS00755	PF16870	2-oxoglutarate dehydrogenase C-terminal
M9396_RS00755	PF02779	Transketolase, pyrimidine binding domain
M9396_RS00760	PF13085	2Fe-2S iron-sulfur cluster binding domain
M9396_RS00765	PF00890	FAD binding domain
M9396_RS00765	PF02910	Fumarate reductase flavoprotein C-term
M9396_RS00775	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
M9396_RS00780	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
M9396_RS00780	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
M9396_RS00780	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
M9396_RS00780	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
M9396_RS00785	PF12697	Alpha/beta hydrolase family
M9396_RS00790	PF00258	Flavodoxin
M9396_RS00795	PF00749	tRNA synthetases class I (E and Q), catalytic domain
M9396_RS00795	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
M9396_RS00800	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
M9396_RS00805	PF01979	Amidohydrolase family
M9396_RS00825	PF01494	FAD binding domain
M9396_RS00835	PF02562	PhoH-like protein
M9396_RS00840	PF02130	Uncharacterized protein family UPF0054
M9396_RS00845	PF00571	CBS domain
M9396_RS00845	PF03471	Transporter associated domain
M9396_RS00850	PF00795	Carbon-nitrogen hydrolase
M9396_RS00855	PF00133	tRNA synthetases class I (I, L, M and V)
M9396_RS00855	PF13603	Leucyl-tRNA synthetase, Domain 2
M9396_RS00855	PF08264	Anticodon-binding domain of tRNA
M9396_RS00860	PF04390	Lipopolysaccharide-assembly
M9396_RS00875	PF00905	Penicillin binding protein transpeptidase domain
M9396_RS00875	PF03717	Penicillin-binding Protein dimerisation domain
M9396_RS00880	PF01098	Cell cycle protein
M9396_RS00885	PF00892	EamA-like transporter family
M9396_RS00895	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
M9396_RS00895	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
M9396_RS00900	PF09190	DALR domain
M9396_RS00900	PF01406	tRNA synthetases class I (C) catalytic domain
M9396_RS00905	PF00149	Calcineurin-like phosphoesterase
M9396_RS00910	PF05191	Adenylate kinase, active site lid
M9396_RS00915	PF12169	DNA polymerase III subunits gamma and tau domain III
M9396_RS00915	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
M9396_RS00915	PF12170	DNA polymerase III tau subunit V interacting with alpha
M9396_RS00920	PF00156	Phosphoribosyl transferase domain
M9396_RS00930	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
M9396_RS00930	PF00004	ATPase family associated with various cellular activities (AAA)
M9396_RS00930	PF05362	Lon protease (S16) C-terminal proteolytic domain
M9396_RS00935	PF01523	Putative modulator of DNA gyrase
M9396_RS00940	PF01523	Putative modulator of DNA gyrase
M9396_RS00950	PF04085	rod shape-determining protein MreC
M9396_RS00960	PF01220	Dehydroquinase class II
M9396_RS00965	PF00364	Biotin-requiring enzyme
M9396_RS00970	PF02785	Biotin carboxylase C-terminal domain
M9396_RS00970	PF00289	Biotin carboxylase, N-terminal domain
M9396_RS00970	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
M9396_RS00980	PF04073	Aminoacyl-tRNA editing domain
M9396_RS00980	PF03129	Anticodon binding domain
M9396_RS00980	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
M9396_RS00985	PF11734	TilS substrate C-terminal domain
M9396_RS00985	PF01171	PP-loop family
M9396_RS00985	PF09179	TilS substrate binding domain
M9396_RS00990	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
M9396_RS00995	PF07733	Bacterial DNA polymerase III alpha NTPase domain
M9396_RS00995	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
M9396_RS00995	PF14579	Helix-hairpin-helix motif
M9396_RS00995	PF02811	PHP domain
M9396_RS00995	PF01336	OB-fold nucleic acid binding domain
M9396_RS01000	PF01351	Ribonuclease HII
M9396_RS01005	PF02684	Lipid-A-disaccharide synthetase
M9396_RS01010	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
M9396_RS01010	PF00132	Bacterial transferase hexapeptide (six repeats)
M9396_RS01015	PF07977	FabA-like domain
M9396_RS01020	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
M9396_RS01020	PF00132	Bacterial transferase hexapeptide (six repeats)
M9396_RS01020	PF14602	Hexapeptide repeat of succinyl-transferase
M9396_RS01025	PF03938	Outer membrane protein (OmpH-like)
M9396_RS01030	PF01103	Surface antigen
M9396_RS01030	PF07244	Surface antigen variable number repeat
M9396_RS01035	PF17820	PDZ domain
M9396_RS01035	PF02163	Peptidase family M50
M9396_RS01045	PF01255	Putative undecaprenyl diphosphate synthase
M9396_RS01050	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
M9396_RS01050	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
M9396_RS01050	PF13288	DXP reductoisomerase C-terminal domain
M9396_RS01055	PF01765	Ribosome recycling factor
M9396_RS01060	PF00696	Amino acid kinase family
M9396_RS01065	PF00889	Elongation factor TS
M9396_RS01070	PF00318	Ribosomal protein S2
M9396_RS01075	PF00557	Metallopeptidase family M24
M9396_RS01080	PF14602	Hexapeptide repeat of succinyl-transferase
M9396_RS01080	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
M9396_RS01085	PF12705	PD-(D/E)XK nuclease superfamily
M9396_RS01085	PF00580	UvrD/REP helicase N-terminal domain
M9396_RS01085	PF13361	UvrD-like helicase C-terminal domain
M9396_RS01090	PF13538	UvrD-like helicase C-terminal domain
M9396_RS01095	PF17946	RecC C-terminal domain
M9396_RS01100	PF01790	Prolipoprotein diacylglyceryl transferase
M9396_RS01105	PF00293	NUDIX domain
M9396_RS01110	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
M9396_RS01110	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
M9396_RS01115	PF01336	OB-fold nucleic acid binding domain
M9396_RS01115	PF00152	tRNA synthetases class II (D, K and N) 
M9396_RS01125	PF01571	Aminomethyltransferase folate-binding domain
M9396_RS01130	PF01494	FAD binding domain
M9396_RS01135	PF01494	FAD binding domain
M9396_RS01140	PF05164	Cell division protein ZapA
M9396_RS01145	PF01812	5-formyltetrahydrofolate cyclo-ligase family
M9396_RS01150	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
M9396_RS01155	PF01116	Fructose-bisphosphate aldolase class-II
M9396_RS01160	PF00162	Phosphoglycerate kinase
M9396_RS01165	PF00491	Arginase family
M9396_RS01170	PF02773	S-adenosylmethionine synthetase, C-terminal domain
M9396_RS01170	PF02772	S-adenosylmethionine synthetase, central domain
M9396_RS01170	PF00438	S-adenosylmethionine synthetase, N-terminal domain
M9396_RS01175	PF02622	Uncharacterized ACR, COG1678
M9396_RS01180	PF03652	Holliday junction resolvase
M9396_RS01185	PF10576	Iron-sulfur binding domain of endonuclease III
M9396_RS01185	PF00633	Helix-hairpin-helix motif
M9396_RS01185	PF00730	HhH-GPD superfamily base excision DNA repair protein
M9396_RS01185	PF14815	NUDIX domain
M9396_RS01190	PF04362	Bacterial Fe(2+) trafficking
M9396_RS01195	PF07724	AAA domain (Cdc48 subfamily)
M9396_RS01195	PF10431	C-terminal, D2-small domain, of ClpB protein 
M9396_RS01195	PF06689	ClpX C4-type zinc finger
M9396_RS01200	PF00574	Clp protease
M9396_RS01205	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
M9396_RS01205	PF06481	COX Aromatic Rich Motif
M9396_RS01210	PF00115	Cytochrome C and Quinol oxidase polypeptide I
M9396_RS01215	PF00510	Cytochrome c oxidase subunit III
M9396_RS01220	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
M9396_RS01225	PF01040	UbiA prenyltransferase family
M9396_RS01230	PF07690	Major Facilitator Superfamily
M9396_RS01235	PF02568	Thiamine biosynthesis protein (ThiI)
M9396_RS01235	PF02926	THUMP domain
M9396_RS01240	PF00348	Polyprenyl synthetase
M9396_RS01245	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
M9396_RS01245	PF02779	Transketolase, pyrimidine binding domain
M9396_RS01245	PF02780	Transketolase, C-terminal domain
M9396_RS01250	PF04608	Phosphatidylglycerophosphatase A
M9396_RS01255	PF01029	NusB family
M9396_RS01260	PF00885	6,7-dimethyl-8-ribityllumazine synthase
M9396_RS01265	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
M9396_RS01265	PF01872	RibD C-terminal domain
M9396_RS01270	PF02355	Protein export membrane protein
M9396_RS01270	PF07549	SecD/SecF GG Motif
M9396_RS01275	PF07549	SecD/SecF GG Motif
M9396_RS01275	PF13721	SecD export protein N-terminal TM region
M9396_RS01275	PF02355	Protein export membrane protein
M9396_RS01280	PF02699	Preprotein translocase subunit
M9396_RS01285	PF01702	Queuine tRNA-ribosyltransferase
M9396_RS01290	PF10417	C-terminal domain of 1-Cys peroxiredoxin
M9396_RS01290	PF00578	AhpC/TSA family
M9396_RS01300	PF13580	SIS domain
M9396_RS01305	PF00929	Exonuclease
M9396_RS01310	PF00075	RNase H
M9396_RS01315	PF16123	Hydroxyacylglutathione hydrolase C-terminus
M9396_RS01315	PF00753	Metallo-beta-lactamase superfamily
M9396_RS01325	PF08501	Shikimate dehydrogenase substrate binding domain
M9396_RS01325	PF01488	Shikimate / quinate 5-dehydrogenase
M9396_RS01330	PF01300	Telomere recombination
M9396_RS01335	PF01327	Polypeptide deformylase
M9396_RS01340	PF02911	Formyl transferase, C-terminal domain
M9396_RS01340	PF00551	Formyl transferase
M9396_RS01345	PF01196	Ribosomal protein L17
M9396_RS01350	PF01000	RNA polymerase Rpb3/RpoA insert domain
M9396_RS01350	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
M9396_RS01350	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
M9396_RS01355	PF00163	Ribosomal protein S4/S9 N-terminal domain
M9396_RS01355	PF01479	S4 domain
M9396_RS01360	PF00411	Ribosomal protein S11
M9396_RS01365	PF00416	Ribosomal protein S13/S18
M9396_RS01370	PF00444	Ribosomal protein L36
M9396_RS01375	PF00344	SecY translocase
M9396_RS01380	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
M9396_RS01385	PF00327	Ribosomal protein L30p/L7e
M9396_RS01390	PF00333	Ribosomal protein S5, N-terminal domain
M9396_RS01390	PF03719	Ribosomal protein S5, C-terminal domain
M9396_RS01395	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
M9396_RS01400	PF00347	Ribosomal protein L6
M9396_RS01405	PF00410	Ribosomal protein S8
M9396_RS01410	PF00253	Ribosomal protein S14p/S29e
M9396_RS01415	PF00281	Ribosomal protein L5
M9396_RS01415	PF00673	ribosomal L5P family C-terminus
M9396_RS01420	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
M9396_RS01420	PF00467	KOW motif
M9396_RS01425	PF00238	Ribosomal protein L14p/L23e
M9396_RS01430	PF00366	Ribosomal protein S17
M9396_RS01435	PF00831	Ribosomal L29 protein
M9396_RS01440	PF00252	Ribosomal protein L16p/L10e
M9396_RS01445	PF07650	KH domain
M9396_RS01445	PF00189	Ribosomal protein S3, C-terminal domain
M9396_RS01450	PF00237	Ribosomal protein L22p/L17e
M9396_RS01455	PF00203	Ribosomal protein S19
M9396_RS01460	PF00181	Ribosomal Proteins L2, RNA binding domain
M9396_RS01460	PF03947	Ribosomal Proteins L2, C-terminal domain
M9396_RS01465	PF00276	Ribosomal protein L23
M9396_RS01470	PF00573	Ribosomal protein L4/L1 family
M9396_RS01475	PF00297	Ribosomal protein L3
M9396_RS01480	PF00338	Ribosomal protein S10p/S20e
M9396_RS01485	PF00210	Ferritin-like domain
M9396_RS01510	PF00485	Phosphoribulokinase / Uridine kinase family
M9396_RS01515	PF02237	Biotin protein ligase C terminal domain
M9396_RS01515	PF03099	Biotin/lipoate A/B protein ligase family
M9396_RS01515	PF08279	HTH domain
M9396_RS01520	PF01565	FAD binding domain 
M9396_RS01520	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
M9396_RS01525	PF00004	ATPase family associated with various cellular activities (AAA)
M9396_RS01525	PF07724	AAA domain (Cdc48 subfamily)
M9396_RS01525	PF17871	AAA lid domain
M9396_RS01525	PF02861	Clp amino terminal domain, pathogenicity island component
M9396_RS01525	PF10431	C-terminal, D2-small domain, of ClpB protein 
M9396_RS01530	PF01479	S4 domain
M9396_RS01530	PF00849	RNA pseudouridylate synthase
M9396_RS01535	PF13525	Outer membrane lipoprotein
M9396_RS01540	PF01817	Chorismate mutase type II
M9396_RS01540	PF00800	Prephenate dehydratase
M9396_RS01545	PF01817	Chorismate mutase type II
M9396_RS01545	PF02153	Prephenate dehydrogenase
M9396_RS01550	PF00793	DAHP synthetase I family
M9396_RS01555	PF01245	Ribosomal protein L19
M9396_RS01560	PF01746	tRNA (Guanine-1)-methyltransferase
M9396_RS01565	PF05239	PRC-barrel domain
M9396_RS01565	PF01782	RimM N-terminal domain
M9396_RS01570	PF00886	Ribosomal protein S16
M9396_RS01575	PF02978	Signal peptide binding domain
M9396_RS01575	PF02881	SRP54-type protein, helical bundle domain
M9396_RS01575	PF00448	SRP54-type protein, GTPase domain
M9396_RS01590	PF02599	Global regulator protein family
M9396_RS01595	PF02272	DHHA1 domain
M9396_RS01595	PF01411	tRNA synthetases class II (A)
M9396_RS01595	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
M9396_RS01600	PF01476	LysM domain
M9396_RS01600	PF01551	Peptidase family M23
M9396_RS01605	PF02542	YgbB family
M9396_RS01610	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
M9396_RS01615	PF04977	Septum formation initiator
M9396_RS01625	PF00009	Elongation factor Tu GTP binding domain
M9396_RS01630	PF01507	Phosphoadenosine phosphosulfate reductase family
M9396_RS01635	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
M9396_RS01635	PF10414	Sirohaem synthase dimerisation region
M9396_RS01640	PF01507	Phosphoadenosine phosphosulfate reductase family
M9396_RS01645	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
M9396_RS01645	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
M9396_RS01650	PF00667	FAD binding domain
M9396_RS01650	PF00258	Flavodoxin
M9396_RS01650	PF00175	Oxidoreductase NAD-binding domain 
M9396_RS01655	PF00113	Enolase, C-terminal TIM barrel domain
M9396_RS01655	PF03952	Enolase, N-terminal domain
M9396_RS01660	PF06418	CTP synthase N-terminus
M9396_RS01660	PF00117	Glutamine amidotransferase class-I
M9396_RS01665	PF01521	Iron-sulphur cluster biosynthesis
M9396_RS01670	PF00912	Transglycosylase
M9396_RS01670	PF00905	Penicillin binding protein transpeptidase domain
M9396_RS01670	PF14812	Transmembrane domain of transglycosylase PBP1 at N-terminal
M9396_RS01670	PF14814	Bifunctional transglycosylase second domain
M9396_RS01675	PF00456	Transketolase, thiamine diphosphate binding domain
M9396_RS01675	PF17831	Pyruvate dehydrogenase E1 component middle domain
M9396_RS01680	PF02817	e3 binding domain
M9396_RS01680	PF00364	Biotin-requiring enzyme
M9396_RS01680	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
M9396_RS01685	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M9396_RS01685	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
M9396_RS01690	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
M9396_RS01695	PF01258	Prokaryotic dksA/traR C4-type zinc finger
M9396_RS01700	PF01121	Dephospho-CoA kinase
M9396_RS01705	PF02810	SEC-C motif
M9396_RS01705	PF07517	SecA DEAD-like domain
M9396_RS01705	PF01043	SecA preprotein cross-linking domain
M9396_RS01705	PF07516	SecA Wing and Scaffold domain
M9396_RS01710	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
M9396_RS01715	PF00091	Tubulin/FtsZ family, GTPase domain
M9396_RS01715	PF12327	FtsZ family, C-terminal domain
M9396_RS01720	PF02491	SHS2 domain inserted in FTSA
M9396_RS01725	PF03799	Cell division protein FtsQ
M9396_RS01725	PF08478	POTRA domain, FtsQ-type
M9396_RS01730	PF01225	Mur ligase family, catalytic domain
M9396_RS01730	PF02875	Mur ligase family, glutamate ligase domain
M9396_RS01730	PF08245	Mur ligase middle domain
M9396_RS01735	PF04101	Glycosyltransferase family 28 C-terminal domain
M9396_RS01735	PF03033	Glycosyltransferase family 28 N-terminal domain
M9396_RS01740	PF01098	Cell cycle protein
M9396_RS01745	PF02875	Mur ligase family, glutamate ligase domain
M9396_RS01745	PF08245	Mur ligase middle domain
M9396_RS01750	PF00953	Glycosyl transferase family 4
M9396_RS01755	PF02875	Mur ligase family, glutamate ligase domain
M9396_RS01755	PF08245	Mur ligase middle domain
M9396_RS01755	PF01225	Mur ligase family, catalytic domain
M9396_RS01760	PF01225	Mur ligase family, catalytic domain
M9396_RS01760	PF02875	Mur ligase family, glutamate ligase domain
M9396_RS01760	PF08245	Mur ligase middle domain
M9396_RS01765	PF03717	Penicillin-binding Protein dimerisation domain
M9396_RS01765	PF00905	Penicillin binding protein transpeptidase domain
M9396_RS01770	PF04999	Cell division protein FtsL
M9396_RS01775	PF01795	MraW methylase family
M9396_RS01780	PF00682	HMGL-like
M9396_RS01780	PF08502	LeuA allosteric (dimerisation) domain
M9396_RS01785	PF00180	Isocitrate/isopropylmalate dehydrogenase
M9396_RS01790	PF00330	Aconitase family (aconitate hydratase)
M9396_RS01795	PF00694	Aconitase C-terminal domain
M9396_RS01800	PF03968	OstA-like protein
M9396_RS01800	PF04453	LPS transport system D
M9396_RS01805	PF00639	PPIC-type PPIASE domain
M9396_RS01805	PF09312	SurA N-terminal domain
M9396_RS01810	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
M9396_RS01815	PF00398	Ribosomal RNA adenine dimethylase
M9396_RS01820	PF00149	Calcineurin-like phosphoesterase
M9396_RS01825	PF00186	Dihydrofolate reductase
M9396_RS01830	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
M9396_RS01830	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
M9396_RS01830	PF02142	MGS-like domain
M9396_RS01835	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
M9396_RS01835	PF00117	Glutamine amidotransferase class-I
M9396_RS01840	PF01113	Dihydrodipicolinate reductase, N-terminus
M9396_RS01840	PF05173	Dihydrodipicolinate reductase, C-terminus
M9396_RS01845	PF02401	LytB protein
M9396_RS01850	PF01252	Signal peptidase (SPase) II
M9396_RS01855	PF08264	Anticodon-binding domain of tRNA
M9396_RS01855	PF00133	tRNA synthetases class I (I, L, M and V)
M9396_RS01855	PF06827	Zinc finger found in FPG and IleRS
M9396_RS01860	PF06574	FAD synthetase
M9396_RS01860	PF01687	Riboflavin kinase
M9396_RS01865	PF01649	Ribosomal protein S20
M9396_RS01870	PF00226	DnaJ domain
M9396_RS01870	PF01556	DnaJ C terminal domain
M9396_RS01870	PF00684	DnaJ central domain
M9396_RS01875	PF00012	Hsp70 protein
M9396_RS01880	PF00291	Pyridoxal-phosphate dependent enzyme
M9396_RS01880	PF14821	Threonine synthase N terminus
M9396_RS01885	PF00288	GHMP kinases N terminal domain
M9396_RS01890	PF03447	Homoserine dehydrogenase, NAD binding domain
M9396_RS01890	PF00742	Homoserine dehydrogenase
M9396_RS01890	PF00696	Amino acid kinase family
M9396_RS01890	PF01842	ACT domain
M9396_RS01890	PF13840	ACT domain 
M9396_RS01900	PF03880	DbpA RNA binding domain   
M9396_RS01900	PF00270	DEAD/DEAH box helicase
M9396_RS01900	PF00271	Helicase conserved C-terminal domain
M9396_RS01905	PF00013	KH domain
M9396_RS01905	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
M9396_RS01905	PF01138	3' exoribonuclease family, domain 1
M9396_RS01905	PF03725	3' exoribonuclease family, domain 2
M9396_RS01905	PF00575	S1 RNA binding domain
M9396_RS01910	PF00312	Ribosomal protein S15
M9396_RS01915	PF01509	TruB family pseudouridylate synthase (N terminal domain)
M9396_RS01915	PF16198	tRNA pseudouridylate synthase B C-terminal domain
M9396_RS01920	PF02033	Ribosome-binding factor A
M9396_RS01925	PF00009	Elongation factor Tu GTP binding domain
M9396_RS01925	PF11987	Translation-initiation factor 2
M9396_RS01925	PF08364	Bacterial translation initiation factor IF-2 associated region
M9396_RS01925	PF04760	Translation initiation factor IF-2, N-terminal region
M9396_RS01930	PF13184	NusA-like KH domain
M9396_RS01930	PF08529	NusA N-terminal domain
M9396_RS01930	PF00575	S1 RNA binding domain
M9396_RS01945	PF03840	Preprotein translocase SecG subunit
M9396_RS01950	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
M9396_RS01950	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
M9396_RS01950	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
M9396_RS01950	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
M9396_RS01955	PF00809	Pterin binding enzyme
M9396_RS01960	PF00004	ATPase family associated with various cellular activities (AAA)
M9396_RS01960	PF17862	AAA+ lid domain
M9396_RS01960	PF06480	FtsH Extracellular
M9396_RS01960	PF01434	Peptidase family M41
M9396_RS01965	PF01728	FtsJ-like methyltransferase
M9396_RS01970	PF01272	Transcription elongation factor, GreA/GreB, C-term
M9396_RS01970	PF03449	Transcription elongation factor, N-terminal
M9396_RS01975	PF01018	GTP1/OBG
M9396_RS01975	PF01926	50S ribosome-binding GTPase
M9396_RS01980	PF01016	Ribosomal L27 protein
M9396_RS01985	PF00829	Ribosomal prokaryotic L21 protein
M9396_RS01990	PF00348	Polyprenyl synthetase
M9396_RS01995	PF00719	Inorganic pyrophosphatase
M9396_RS02000	PF04357	TamB, inner membrane protein subunit of TAM complex
M9396_RS02005	PF01103	Surface antigen
M9396_RS02005	PF07244	Surface antigen variable number repeat
M9396_RS02005	PF17243	POTRA domain TamA domain 1
M9396_RS02015	PF00459	Inositol monophosphatase family
M9396_RS02020	PF03948	Ribosomal protein L9, C-terminal domain
M9396_RS02020	PF01281	Ribosomal protein L9, N-terminal domain
M9396_RS02025	PF01084	Ribosomal protein S18
M9396_RS02030	PF01250	Ribosomal protein S6
M9396_RS02035	PF00588	SpoU rRNA Methylase family
M9396_RS02035	PF08032	RNA 2'-O ribose methyltransferase substrate binding
M9396_RS02040	PF00709	Adenylosuccinate synthetase
M9396_RS02045	PF01145	SPFH domain / Band 7 family
M9396_RS02050	PF12221	Bacterial membrane protein N terminal
M9396_RS02050	PF01145	SPFH domain / Band 7 family
M9396_RS02055	PF16360	GTP-binding GTPase Middle Region
M9396_RS02055	PF13167	GTP-binding GTPase N-terminal
M9396_RS02055	PF01926	50S ribosome-binding GTPase
M9396_RS02070	PF01520	N-acetylmuramoyl-L-alanine amidase
M9396_RS02075	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
M9396_RS02085	PF00929	Exonuclease
M9396_RS02090	PF02666	Phosphatidylserine decarboxylase
M9396_RS02095	PF00924	Mechanosensitive ion channel
M9396_RS02095	PF12795	Mechanosensitive ion channel porin domain
M9396_RS02095	PF12794	Mechanosensitive ion channel inner membrane domain 1
M9396_RS02100	PF09285	Elongation factor P, C-terminal
M9396_RS02100	PF01132	Elongation factor P (EF-P) OB domain
M9396_RS02100	PF08207	Elongation factor P (EF-P) KOW-like domain
M9396_RS02105	PF00118	TCP-1/cpn60 chaperonin family
M9396_RS02110	PF00166	Chaperonin 10 Kd subunit
M9396_RS02115	PF03091	CutA1 divalent ion tolerance protein
M9396_RS02125	PF01053	Cys/Met metabolism PLP-dependent enzyme
M9396_RS02130	PF01553	Acyltransferase
M9396_RS02135	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
M9396_RS02140	PF01467	Cytidylyltransferase-like
M9396_RS02140	PF00294	pfkB family carbohydrate kinase
M9396_RS02145	PF01743	Poly A polymerase head domain
M9396_RS02145	PF12627	Probable RNA and SrmB- binding site of polymerase A
M9396_RS02150	PF02673	Bacitracin resistance protein BacA
M9396_RS02160	PF02660	Glycerol-3-phosphate acyltransferase
M9396_RS02165	PF00814	Glycoprotease family
M9396_RS02170	PF01165	Ribosomal protein S21
M9396_RS02175	PF01807	CHC2 zinc finger
M9396_RS02175	PF08275	DNA primase catalytic core, N-terminal domain
M9396_RS02175	PF08278	DNA primase DnaG DnaB-binding 
M9396_RS02175	PF10410	DnaB-helicase binding domain of primase
M9396_RS02180	PF04546	Sigma-70, non-essential region
M9396_RS02180	PF03979	Sigma-70 factor, region 1.1
M9396_RS02180	PF00140	Sigma-70 factor, region 1.2
M9396_RS02180	PF04542	Sigma-70 region 2 
M9396_RS02180	PF04539	Sigma-70 region 3
M9396_RS02180	PF04545	Sigma-70, region 4
M9396_RS02190	PF09335	SNARE associated Golgi protein
M9396_RS02200	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
M9396_RS02205	PF04972	BON domain
M9396_RS02210	PF00380	Ribosomal protein S9/S16
M9396_RS02215	PF00572	Ribosomal protein L13
M9396_RS02225	PF13180	PDZ domain
M9396_RS02225	PF00595	PDZ domain
M9396_RS02230	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
M9396_RS02235	PF01722	BolA-like protein
M9396_RS02240	PF06835	Lipopolysaccharide-assembly, LptC-related
M9396_RS02250	PF00005	ABC transporter
M9396_RS02250	PF12399	Branched-chain amino acid ATP-binding cassette transporter
M9396_RS02255	PF00950	ABC 3 transport family
M9396_RS02260	PF00005	ABC transporter
M9396_RS02270	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M9396_RS02270	PF03466	LysR substrate binding domain
M9396_RS02275	PF03739	Lipopolysaccharide export system permease LptF/LptG
M9396_RS02280	PF03739	Lipopolysaccharide export system permease LptF/LptG
M9396_RS02285	PF00883	Cytosol aminopeptidase family, catalytic domain
M9396_RS02285	PF02789	Cytosol aminopeptidase family, N-terminal domain
M9396_RS02290	PF04364	DNA polymerase III chi subunit, HolC
M9396_RS02295	PF08264	Anticodon-binding domain of tRNA
M9396_RS02295	PF00133	tRNA synthetases class I (I, L, M and V)
M9396_RS02300	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
M9396_RS02300	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
M9396_RS02305	PF01042	Endoribonuclease L-PSP
M9396_RS02310	PF00375	Sodium:dicarboxylate symporter family
M9396_RS02315	PF00999	Sodium/hydrogen exchanger family
M9396_RS02320	PF00436	Single-strand binding protein family
M9396_RS02325	PF00772	DnaB-like helicase N terminal domain
M9396_RS02325	PF03796	DnaB-like helicase C terminal domain
M9396_RS02330	PF01475	Ferric uptake regulator family
M9396_RS02335	PF01040	UbiA prenyltransferase family
M9396_RS02340	PF01384	Phosphate transporter family
M9396_RS02345	PF01432	Peptidase family M3
M9396_RS02355	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
M9396_RS02355	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
M9396_RS02360	PF05746	DALR anticodon binding domain
M9396_RS02360	PF02092	Glycyl-tRNA synthetase beta subunit
M9396_RS02365	PF02091	Glycyl-tRNA synthetase alpha subunit
M9396_RS02375	PF00011	Hsp20/alpha crystallin family
M9396_RS02380	PF00204	DNA gyrase B
M9396_RS02380	PF00986	DNA gyrase B subunit, carboxyl terminus
M9396_RS02380	PF18053	DNA gyrase B subunit insert domain
M9396_RS02380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M9396_RS02380	PF01751	Toprim domain
M9396_RS02385	PF02767	DNA polymerase III beta subunit, central domain
M9396_RS02385	PF02768	DNA polymerase III beta subunit, C-terminal domain
M9396_RS02385	PF00712	DNA polymerase III beta subunit, N-terminal domain
M9396_RS02390	PF00468	Ribosomal protein L34
M9396_RS02395	PF00825	Ribonuclease P
M9396_RS02400	PF02096	60Kd inner membrane protein
M9396_RS02400	PF14849	YidC periplasmic domain
M9396_RS02405	PF01926	50S ribosome-binding GTPase
M9396_RS02405	PF12631	MnmE helical domain
M9396_RS02405	PF10396	GTP-binding protein TrmE N-terminus
M9396_RS02410	PF00132	Bacterial transferase hexapeptide (six repeats)
M9396_RS02410	PF14602	Hexapeptide repeat of succinyl-transferase
M9396_RS02410	PF12804	MobA-like NTP transferase domain
M9396_RS02415	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
M9396_RS02415	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
M9396_RS02420	PF02874	ATP synthase alpha/beta family, beta-barrel domain
M9396_RS02420	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M9396_RS02425	PF00231	ATP synthase
M9396_RS02430	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M9396_RS02430	PF00306	ATP synthase alpha/beta chain, C terminal domain
M9396_RS02430	PF02874	ATP synthase alpha/beta family, beta-barrel domain
M9396_RS02435	PF00213	ATP synthase delta (OSCP) subunit
M9396_RS02440	PF00430	ATP synthase B/B' CF(0)
M9396_RS02445	PF00137	ATP synthase subunit C
M9396_RS02450	PF00119	ATP synthase A chain
M9396_RS02455	PF01134	Glucose inhibited division protein A
M9396_RS02455	PF13932	GidA associated domain
M9396_RS02465	PF04204	Homoserine O-succinyltransferase 
M9396_RS02470	PF00342	Phosphoglucose isomerase
M9396_RS02480	PF02881	SRP54-type protein, helical bundle domain
M9396_RS02480	PF00448	SRP54-type protein, GTPase domain
M9396_RS02485	PF00140	Sigma-70 factor, region 1.2
M9396_RS02485	PF04542	Sigma-70 region 2 
M9396_RS02485	PF04545	Sigma-70, region 4
M9396_RS02490	PF08267	Cobalamin-independent synthase, N-terminal domain
M9396_RS02490	PF01717	Cobalamin-independent synthase, Catalytic domain
M9396_RS02495	PF01048	Phosphorylase superfamily
M9396_RS02500	PF02646	RmuC family
M9396_RS02505	PF01209	ubiE/COQ5 methyltransferase family
M9396_RS02510	PF03109	ABC1 family
M9396_RS02515	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
M9396_RS02520	PF01323	DSBA-like thioredoxin domain
M9396_RS02525	PF01612	3'-5' exonuclease
M9396_RS02525	PF00476	DNA polymerase family A
M9396_RS02525	PF01367	5'-3' exonuclease, C-terminal SAM fold
M9396_RS02525	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
M9396_RS02530	PF01926	50S ribosome-binding GTPase
M9396_RS02535	PF00120	Glutamine synthetase, catalytic domain
M9396_RS02535	PF03951	Glutamine synthetase, beta-Grasp domain
M9396_RS02545	PF00625	Guanylate kinase
M9396_RS02550	PF01047	MarR family
M9396_RS02555	PF08340	Domain of unknown function (DUF1732)
M9396_RS02555	PF03755	YicC-like family, N-terminal region 
M9396_RS02560	PF00692	dUTPase
M9396_RS02565	PF04127	DNA / pantothenate metabolism flavoprotein
M9396_RS02565	PF02441	Flavoprotein
M9396_RS02570	PF00830	Ribosomal L28 family
M9396_RS02575	PF00471	Ribosomal protein L33
M9396_RS02580	PF01467	Cytidylyltransferase-like
M9396_RS02585	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
M9396_RS02590	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
M9396_RS02595	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
M9396_RS02600	PF01370	NAD dependent epimerase/dehydratase family
M9396_RS02605	PF00581	Rhodanese-like domain
M9396_RS02610	PF00462	Glutaredoxin
M9396_RS02615	PF02556	Preprotein translocase subunit SecB
M9396_RS02620	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
M9396_RS02620	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
M9396_RS02625	PF00132	Bacterial transferase hexapeptide (six repeats)
M9396_RS02625	PF06426	Serine acetyltransferase, N-terminal 
M9396_RS02630	PF00365	Phosphofructokinase
M9396_RS02635	PF00121	Triosephosphate isomerase
M9396_RS02640	PF00175	Oxidoreductase NAD-binding domain 
M9396_RS02640	PF00970	Oxidoreductase FAD-binding domain
M9396_RS02645	PF01197	Ribosomal protein L31
M9396_RS02650	PF01053	Cys/Met metabolism PLP-dependent enzyme
M9396_RS02655	PF02219	Methylenetetrahydrofolate reductase
M9396_RS02660	PF01177	Asp/Glu/Hydantoin racemase
M9396_RS02680	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
M9396_RS02680	PF00205	Thiamine pyrophosphate enzyme, central domain
M9396_RS02680	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
M9396_RS02690	PF01063	Amino-transferase class IV
M9396_RS02695	PF00920	Dehydratase family
M9396_RS02700	PF00291	Pyridoxal-phosphate dependent enzyme
M9396_RS02700	PF00585	C-terminal regulatory domain of Threonine dehydratase
M9396_RS02705	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
M9396_RS02705	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
M9396_RS02710	PF00085	Thioredoxin
M9396_RS02715	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M9396_RS02715	PF07498	Rho termination factor, N-terminal domain
M9396_RS02715	PF07497	Rho termination factor, RNA-binding domain
M9396_RS02740	PF02602	Uroporphyrinogen-III synthase HemD
M9396_RS02745	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
M9396_RS02745	PF03900	Porphobilinogen deaminase, C-terminal domain
M9396_RS02750	PF01678	Diaminopimelate epimerase
M9396_RS02755	PF13419	Haloacid dehalogenase-like hydrolase
M9396_RS02775	PF00580	UvrD/REP helicase N-terminal domain
M9396_RS02775	PF13361	UvrD-like helicase C-terminal domain
M9396_RS02780	PF00580	UvrD/REP helicase N-terminal domain
M9396_RS02780	PF13361	UvrD-like helicase C-terminal domain
M9396_RS02785	PF01544	CorA-like Mg2+ transporter protein
M9396_RS02795	PF01914	MarC family integral membrane protein
M9396_RS02800	PF01118	Semialdehyde dehydrogenase, NAD binding domain
M9396_RS02800	PF02774	Semialdehyde dehydrogenase, dimerisation domain
M9396_RS02805	PF01521	Iron-sulphur cluster biosynthesis
M9396_RS02805	PF01106	NifU-like domain
M9396_RS02810	PF01202	Shikimate kinase
M9396_RS02815	PF01761	3-dehydroquinate synthase
M9396_RS02820	PF00834	Ribulose-phosphate 3 epimerase family
M9396_RS02825	PF00579	tRNA synthetases class I (W and Y)
M9396_RS02830	PF00117	Glutamine amidotransferase class-I
M9396_RS02835	PF00164	Ribosomal protein S12/S23
M9396_RS02840	PF00177	Ribosomal protein S7p/S5e
M9396_RS02845	PF03144	Elongation factor Tu domain 2
M9396_RS02845	PF00009	Elongation factor Tu GTP binding domain
M9396_RS02845	PF14492	Elongation Factor G, domain II
M9396_RS02845	PF00679	Elongation factor G C-terminus
M9396_RS02845	PF03764	Elongation factor G, domain IV
M9396_RS02850	PF00009	Elongation factor Tu GTP binding domain
M9396_RS02850	PF03144	Elongation factor Tu domain 2
M9396_RS02850	PF03143	Elongation factor Tu C-terminal domain
M9396_RS02855	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
M9396_RS02860	PF00467	KOW motif
M9396_RS02860	PF02357	Transcription termination factor nusG
M9396_RS02865	PF00298	Ribosomal protein L11, RNA binding domain
M9396_RS02865	PF03946	Ribosomal protein L11, N-terminal domain
M9396_RS02870	PF00687	Ribosomal protein L1p/L10e family
M9396_RS02875	PF00466	Ribosomal protein L10
M9396_RS02880	PF16320	Ribosomal protein L7/L12 dimerisation domain
M9396_RS02880	PF00542	Ribosomal protein L7/L12 C-terminal domain
M9396_RS02885	PF04563	RNA polymerase beta subunit
M9396_RS02885	PF04561	RNA polymerase Rpb2, domain 2
M9396_RS02885	PF04565	RNA polymerase Rpb2, domain 3
M9396_RS02885	PF10385	RNA polymerase beta subunit external 1 domain
M9396_RS02885	PF00562	RNA polymerase Rpb2, domain 6
M9396_RS02885	PF04560	RNA polymerase Rpb2, domain 7
M9396_RS02890	PF04997	RNA polymerase Rpb1, domain 1
M9396_RS02890	PF00623	RNA polymerase Rpb1, domain 2
M9396_RS02890	PF04983	RNA polymerase Rpb1, domain 3
M9396_RS02890	PF05000	RNA polymerase Rpb1, domain 4
M9396_RS02890	PF04998	RNA polymerase Rpb1, domain 5
M9396_RS02895	PF02142	MGS-like domain
M9396_RS02895	PF01808	AICARFT/IMPCHase bienzyme
M9396_RS02915	PF13091	PLD-like domain
M9396_RS02920	PF00893	Small Multidrug Resistance protein
M9396_RS02930	PF01668	SmpB protein
M9396_RS02935	PF03364	Polyketide cyclase / dehydrase and lipid transport
M9396_RS02945	PF01513	ATP-NAD kinase
M9396_RS02950	PF01025	GrpE
M9396_RS02955	PF03167	Uracil DNA glycosylase superfamily
M9396_RS02960	PF00679	Elongation factor G C-terminus
M9396_RS02960	PF00009	Elongation factor Tu GTP binding domain
M9396_RS02960	PF06421	GTP-binding protein LepA C-terminus
M9396_RS02965	PF10502	Signal peptidase, peptidase S26 
M9396_RS02970	PF14622	Ribonuclease-III-like
M9396_RS02970	PF00035	Double-stranded RNA binding motif
M9396_RS02975	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
M9396_RS02980	PF01648	4'-phosphopantetheinyl transferase superfamily
M9396_RS02985	PF14437	MafB19-like deaminase
M9396_RS02990	PF00464	Serine hydroxymethyltransferase
M9396_RS02995	PF00459	Inositol monophosphatase family
M9396_RS03000	PF00266	Aminotransferase class-V
M9396_RS03005	PF00334	Nucleoside diphosphate kinase
M9396_RS03010	PF04055	Radical SAM superfamily
M9396_RS03015	PF04551	GcpE protein
M9396_RS03020	PF13393	Histidyl-tRNA synthetase
M9396_RS03025	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
M9396_RS03025	PF01926	50S ribosome-binding GTPase
M9396_RS03030	PF06039	Malate:quinone oxidoreductase (Mqo)
M9396_RS03035	PF00571	CBS domain
M9396_RS03035	PF00478	IMP dehydrogenase / GMP reductase domain
M9396_RS03040	PF02540	NAD synthase
M9396_RS03040	PF00117	Glutamine amidotransferase class-I
M9396_RS03040	PF00958	GMP synthase C terminal domain
M9396_RS03045	PF01774	UreD urease accessory protein
M9396_RS03050	PF00547	Urease, gamma subunit
M9396_RS03055	PF00699	Urease beta subunit
M9396_RS03060	PF01979	Amidohydrolase family
M9396_RS03060	PF00449	Urease alpha-subunit, N-terminal domain
M9396_RS03065	PF01730	UreF
M9396_RS03070	PF02492	CobW/HypB/UreG, nucleotide-binding domain
M9396_RS03080	PF00578	AhpC/TSA family
M9396_RS03085	PF00701	Dihydrodipicolinate synthetase family
M9396_RS03095	PF01546	Peptidase family M20/M25/M40
M9396_RS03095	PF07687	Peptidase dimerisation domain
M9396_RS03100	PF00456	Transketolase, thiamine diphosphate binding domain
M9396_RS03100	PF02779	Transketolase, pyrimidine binding domain
M9396_RS03100	PF02780	Transketolase, C-terminal domain
M9396_RS03115	PF00528	Binding-protein-dependent transport system inner membrane component
M9396_RS03120	PF00528	Binding-protein-dependent transport system inner membrane component
M9396_RS03125	PF00005	ABC transporter
M9396_RS03130	PF05524	PEP-utilising enzyme, N-terminal
M9396_RS03130	PF00391	PEP-utilising enzyme, mobile domain
M9396_RS03130	PF02896	PEP-utilising enzyme, TIM barrel domain
M9396_RS03135	PF00381	PTS HPr component phosphorylation site
M9396_RS03140	PF00291	Pyridoxal-phosphate dependent enzyme
M9396_RS03145	PF01653	NAD-dependent DNA ligase adenylation domain
M9396_RS03145	PF03120	NAD-dependent DNA ligase OB-fold domain
M9396_RS03145	PF12826	Helix-hairpin-helix motif
M9396_RS03160	PF00749	tRNA synthetases class I (E and Q), catalytic domain
M9396_RS03170	PF07670	Nucleoside recognition
M9396_RS03170	PF07662	Na+ dependent nucleoside transporter C-terminus
M9396_RS03170	PF01773	Na+ dependent nucleoside transporter N-terminus
M9396_RS03175	PF01566	Natural resistance-associated macrophage protein
M9396_RS03185	PF01264	Chorismate synthase
M9396_RS03190	PF05175	Methyltransferase small domain
M9396_RS03195	PF00109	Beta-ketoacyl synthase, N-terminal domain
M9396_RS03195	PF02801	Beta-ketoacyl synthase, C-terminal domain
M9396_RS03200	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
M9396_RS03200	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
M9396_RS03200	PF11890	Domain of unknown function (DUF3410)
M9396_RS03205	PF01416	tRNA pseudouridine synthase
M9396_RS03210	PF17848	Acetyl-coA carboxylase zinc finger domain
M9396_RS03210	PF01039	Carboxyl transferase domain
M9396_RS03215	PF02875	Mur ligase family, glutamate ligase domain
M9396_RS03215	PF08245	Mur ligase middle domain
M9396_RS03220	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
M9396_RS03225	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
M9396_RS03230	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
M9396_RS03230	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
M9396_RS03240	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
M9396_RS03240	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
M9396_RS03240	PF10531	SLBB domain
M9396_RS03245	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
M9396_RS03245	PF00384	Molybdopterin oxidoreductase
M9396_RS03245	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
M9396_RS03250	PF00146	NADH dehydrogenase
M9396_RS03255	PF12838	4Fe-4S dicluster domain
M9396_RS03260	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
M9396_RS03265	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
M9396_RS03270	PF00361	Proton-conducting membrane transporter
M9396_RS03270	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
M9396_RS03275	PF00361	Proton-conducting membrane transporter
M9396_RS03280	PF00361	Proton-conducting membrane transporter
M9396_RS03285	PF00111	2Fe-2S iron-sulfur cluster binding domain
M9396_RS03290	PF00268	Ribonucleotide reductase, small chain
M9396_RS03295	PF02867	Ribonucleotide reductase, barrel domain
M9396_RS03295	PF03477	ATP cone domain
M9396_RS03295	PF00317	Ribonucleotide reductase, all-alpha domain
M9396_RS03305	PF00521	DNA gyrase/topoisomerase IV, subunit A
M9396_RS03305	PF03989	DNA gyrase C-terminal domain, beta-propeller
M9396_RS03310	PF00267	Gram-negative porin
