locus-tag	class	description
BAV_RS00005	COG0445	tRNA wobble uridine modification
BAV_RS00010	COG0357	Ribosomal RNA small subunit methyltransferase G
BAV_RS00015	COG1192	Involved in chromosome partitioning
BAV_RS00020	COG1475	DNA binding
BAV_RS00025	COG0252	asparaginase activity
BAV_RS00045	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BAV_RS00055	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAV_RS00065	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BAV_RS00070	COG0081	regulation of translation
BAV_RS00075	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BAV_RS00080	COG0222	ribosome binding
BAV_RS00085	COG0085	RNA polymerase activity
BAV_RS00090	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BAV_RS00120	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BAV_RS00125	COG0049	tRNA binding
BAV_RS00130	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BAV_RS00135	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BAV_RS00140	COG0051	transcription antitermination factor activity, RNA binding
BAV_RS00145	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BAV_RS00150	COG0088	Forms part of the polypeptide exit tunnel
BAV_RS00155	COG0089	rRNA binding
BAV_RS00160	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BAV_RS00165	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BAV_RS00170	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BAV_RS00175	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BAV_RS00180	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BAV_RS00185	COG0255	Belongs to the universal ribosomal protein uL29 family
BAV_RS00190	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BAV_RS00200	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAV_RS00240	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BAV_RS00245	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BAV_RS00250	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BAV_RS00255	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BAV_RS00260	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BAV_RS00265	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BAV_RS00270	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BAV_RS00275	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BAV_RS00280	COG1841	ribosomal large subunit assembly
BAV_RS00285	COG0200	Binds to the 23S rRNA
BAV_RS00290	COG0201	protein transport
BAV_RS00295	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BAV_RS00300	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BAV_RS00305	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BAV_RS00310	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BAV_RS00315	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BAV_RS00320	COG0202	RNA polymerase activity
BAV_RS00325	COG0203	ribosomal protein L17
BAV_RS00335	COG1324	tolerance protein
BAV_RS00340	COG4232	protein-disulfide reductase activity
BAV_RS00350	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BAV_RS00360	COG1333	cytochrome c biogenesis protein
BAV_RS00365	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAV_RS00380	COG1965	Belongs to the frataxin family
BAV_RS00390	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BAV_RS00395	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BAV_RS00400	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BAV_RS00420	COG2814	Major facilitator Superfamily
BAV_RS00425	COG0629	single-stranded DNA binding
BAV_RS00485	COG0438	transferase activity, transferring glycosyl groups
BAV_RS00490	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BAV_RS00495	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAV_RS00530	COG1840	ABC-type Fe3 transport system, periplasmic component
BAV_RS00535	COG1175	transmembrane transport
BAV_RS00540	COG3842	ATPase activity
BAV_RS00550	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BAV_RS00560	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BAV_RS00565	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAV_RS00570	COG1956	GAF domain-containing protein
BAV_RS00575	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BAV_RS00600	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BAV_RS00605	COG3568	Endonuclease Exonuclease Phosphatase
BAV_RS00620	COG2814	Major facilitator Superfamily
BAV_RS00630	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS00630	COG3064	Membrane
BAV_RS00630	COG3210	domain, Protein
BAV_RS00650	COG0859	PFAM glycosyl transferase family 9
BAV_RS00660	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BAV_RS00670	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BAV_RS00675	COG1127	ABC transporter
BAV_RS00695	COG1686	Belongs to the peptidase S11 family
BAV_RS00705	COG2921	Belongs to the UPF0250 family
BAV_RS00710	COG0321	lipoyl(octanoyl) transferase activity
BAV_RS00715	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BAV_RS00720	COG2096	Adenosyltransferase
BAV_RS00730	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BAV_RS00735	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BAV_RS00745	COG0523	cobalamin synthesis protein
BAV_RS00750	COG0735	belongs to the Fur family
BAV_RS00760	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAV_RS00765	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAV_RS00785	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BAV_RS00795	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BAV_RS00800	COG1560	Kdo2-lipid A biosynthetic process
BAV_RS00810	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BAV_RS00830	COG1950	PFAM Membrane protein of
BAV_RS00835	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BAV_RS00860	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BAV_RS00870	COG0617	tRNA 3'-terminal CCA addition
BAV_RS00880	COG0513	Belongs to the DEAD box helicase family
BAV_RS00885	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BAV_RS00890	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BAV_RS00985	COG3181	Tripartite tricarboxylate transporter family receptor
BAV_RS00990	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BAV_RS00995	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAV_RS01000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAV_RS01015	COG0758	DNA mediated transformation
BAV_RS01020	COG2197	response regulator
BAV_RS01025	COG1522	sequence-specific DNA binding
BAV_RS01035	COG0242	peptide deformylase activity
BAV_RS01040	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BAV_RS01050	COG0546	phosphoglycolate phosphatase activity
BAV_RS01060	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAV_RS01065	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAV_RS01100	COG2072	flavoprotein involved in K transport
BAV_RS01105	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAV_RS01115	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAV_RS01125	COG0583	DNA-binding transcription factor activity
BAV_RS01130	COG2188	Transcriptional regulator
BAV_RS01155	COG1960	acyl-CoA dehydrogenase activity
BAV_RS01160	COG1280	lysine exporter protein (LysE YggA)
BAV_RS01165	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BAV_RS01180	COG2204	response regulator
BAV_RS01185	COG0569	domain protein
BAV_RS01195	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
BAV_RS01200	COG2226	methyltransferase
BAV_RS01205	COG1040	competence protein
BAV_RS01215	COG3181	Tripartite tricarboxylate transporter family receptor
BAV_RS01220	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BAV_RS01225	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
BAV_RS01230	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BAV_RS01240	COG0588	phosphoglycerate mutase activity
BAV_RS01245	COG4942	peptidase
BAV_RS01250	COG0793	Belongs to the peptidase S41A family
BAV_RS01255	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAV_RS01260	COG2186	Transcriptional regulator
BAV_RS01270	COG0861	Integral membrane protein TerC family
BAV_RS01275	COG0583	DNA-binding transcription factor activity
BAV_RS01280	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BAV_RS01285	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAV_RS01285	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAV_RS01305	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAV_RS01310	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BAV_RS01315	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BAV_RS01320	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BAV_RS01325	COG0142	geranyltranstransferase activity
BAV_RS01340	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS01345	COG4689	acetoacetate decarboxylase
BAV_RS01405	COG1301	dicarboxylic acid transport
BAV_RS01445	COG0154	amidase activity
BAV_RS01450	COG0683	leucine binding
BAV_RS01455	COG0583	DNA-binding transcription factor activity
BAV_RS01510	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BAV_RS01515	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BAV_RS01520	COG2890	protein-(glutamine-N5) methyltransferase activity
BAV_RS01525	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BAV_RS01545	COG0288	reversible hydration of carbon dioxide
BAV_RS01555	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BAV_RS01565	COG4829	muconolactone delta-isomerase
BAV_RS01570	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAV_RS01580	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS01585	COG2031	fatty acid transporter
BAV_RS01590	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAV_RS01595	COG3539	Fimbrial protein
BAV_RS01600	COG3539	Fimbrial protein
BAV_RS01605	COG3539	Fimbrial protein
BAV_RS01615	COG0129	dihydroxy-acid dehydratase activity
BAV_RS01625	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BAV_RS01630	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BAV_RS01640	COG0673	inositol 2-dehydrogenase activity
BAV_RS01645	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
BAV_RS01660	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BAV_RS01665	COG0583	DNA-binding transcription factor activity
BAV_RS01670	COG0628	permease
BAV_RS01675	COG5285	phytanoyl-CoA dioxygenase
BAV_RS01680	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BAV_RS01685	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BAV_RS01765	COG0531	amino acid
BAV_RS01770	COG1113	amino acid transport
BAV_RS01775	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BAV_RS01780	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BAV_RS01790	COG3040	lipid binding
BAV_RS01800	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BAV_RS01805	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BAV_RS01810	COG3171	Protein conserved in bacteria
BAV_RS01850	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BAV_RS01905	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BAV_RS01915	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BAV_RS01965	COG2974	May be involved in recombination
BAV_RS01975	COG3723	Recombinational DNA repair protein, rece pathway
BAV_RS01980	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BAV_RS02220	COG2233	PERMEase
BAV_RS02225	COG0326	Molecular chaperone. Has ATPase activity
BAV_RS02230	COG0625	glutathione transferase activity
BAV_RS02245	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAV_RS02250	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BAV_RS02265	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BAV_RS02285	COG2423	ornithine cyclodeaminase activity
BAV_RS02295	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAV_RS02305	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAV_RS02335	COG2194	sulfuric ester hydrolase activity
BAV_RS02350	COG1054	Belongs to the UPF0176 family
BAV_RS02355	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAV_RS02355	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAV_RS02365	COG0489	protein tyrosine kinase activity
BAV_RS02380	COG0717	Belongs to the dCTP deaminase family
BAV_RS02400	COG2081	HI0933 family
BAV_RS02405	COG1609	Transcriptional regulator
BAV_RS02410	COG0683	leucine binding
BAV_RS02415	COG0559	Belongs to the binding-protein-dependent transport system permease family
BAV_RS02440	COG0371	Dehydrogenase
BAV_RS02450	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BAV_RS02455	COG0509	glycine decarboxylation via glycine cleavage system
BAV_RS02460	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BAV_RS02460	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BAV_RS02485	COG4172	Belongs to the ABC transporter superfamily
BAV_RS02490	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS02495	COG0601	transmembrane transport
BAV_RS02500	COG0747	negative chemotaxis
BAV_RS02515	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAV_RS02520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAV_RS02530	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BAV_RS02540	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
BAV_RS02545	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BAV_RS02550	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BAV_RS02565	COG0438	transferase activity, transferring glycosyl groups
BAV_RS02580	COG0438	transferase activity, transferring glycosyl groups
BAV_RS02590	COG0166	Belongs to the GPI family
BAV_RS02605	COG0277	FAD linked oxidase domain protein
BAV_RS02610	COG0745	RESPONSE REGULATOR receiver
BAV_RS02615	COG5002	protein histidine kinase activity
BAV_RS02615	COG5000	phosphorelay sensor kinase activity
BAV_RS02620	COG2186	Transcriptional regulator
BAV_RS02625	COG1368	sulfuric ester hydrolase activity
BAV_RS02635	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BAV_RS02650	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAV_RS02660	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BAV_RS02670	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
BAV_RS02675	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BAV_RS02685	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BAV_RS02690	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BAV_RS02695	COG0193	aminoacyl-tRNA hydrolase activity
BAV_RS02705	COG0012	GTP binding
BAV_RS02765	COG0387	Pfam Sodium calcium exchanger
BAV_RS02800	COG3135	benzoate transporter
BAV_RS02805	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BAV_RS02810	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BAV_RS02815	COG0742	ribosomal rna small subunit methyltransferase
BAV_RS02845	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BAV_RS02850	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BAV_RS02855	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BAV_RS02860	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BAV_RS02870	COG0284	orotidine-5'-phosphate decarboxylase activity
BAV_RS02875	COG1252	NADH dehydrogenase
BAV_RS02880	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BAV_RS02885	COG1295	ribonuclease BN
BAV_RS02890	COG0459	protein refolding
BAV_RS02895	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BAV_RS02925	COG1393	Belongs to the ArsC family
BAV_RS02930	COG0431	NADPH-dependent FMN reductase
BAV_RS02940	COG3181	Tripartite tricarboxylate transporter family receptor
BAV_RS02945	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAV_RS02960	COG0346	lactoylglutathione lyase activity
BAV_RS02985	COG4569	acetaldehyde dehydrogenase (acetylating) activity
BAV_RS02990	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAV_RS03000	COG0477	Major facilitator Superfamily
BAV_RS03030	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS03045	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAV_RS03060	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAV_RS03095	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS03105	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BAV_RS03110	COG1802	Transcriptional regulator
BAV_RS03115	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BAV_RS03120	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BAV_RS03125	COG1335	isochorismatase
BAV_RS03130	COG0523	cobalamin synthesis protein
BAV_RS03210	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAV_RS03215	COG1116	anion transmembrane transporter activity
BAV_RS03240	COG3395	kinase activity
BAV_RS03245	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BAV_RS03260	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAV_RS03285	COG2146	nitrite reductase [NAD(P)H] activity
BAV_RS03300	COG3971	2-oxopent-4-enoate hydratase activity
BAV_RS03335	COG0513	Belongs to the DEAD box helicase family
BAV_RS03345	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAV_RS03350	COG0583	DNA-binding transcription factor activity
BAV_RS03370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAV_RS03375	COG1126	abc transporter atp-binding protein
BAV_RS03380	COG0765	amino acid transport
BAV_RS03385	COG0765	amino acid transport
BAV_RS03390	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BAV_RS03400	COG0277	FAD linked oxidase domain protein
BAV_RS03415	COG1522	sequence-specific DNA binding
BAV_RS03420	COG4106	trans-aconitate 2-methyltransferase activity
BAV_RS03425	COG0667	Aldo Keto reductase
BAV_RS03435	COG2154	pterin-4-alpha-carbinolamine dehydratase
BAV_RS03445	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BAV_RS03455	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BAV_RS03460	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAV_RS03465	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BAV_RS03470	COG1929	Belongs to the glycerate kinase type-1 family
BAV_RS03480	COG0700	Nucleoside recognition
BAV_RS03485	COG0242	peptide deformylase activity
BAV_RS03505	COG0583	DNA-binding transcription factor activity
BAV_RS03515	COG0204	Acyl-transferase
BAV_RS03520	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BAV_RS03525	COG0751	glycine-tRNA ligase activity
BAV_RS03530	COG0752	glycyl-tRNA synthetase alpha subunit
BAV_RS03535	COG1024	Enoyl-CoA hydratase
BAV_RS03545	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS03545	COG3210	domain, Protein
BAV_RS03545	COG3064	Membrane
BAV_RS03545	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS03545	COG3064	Membrane
BAV_RS03545	COG3210	domain, Protein
BAV_RS03550	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
BAV_RS03575	COG1335	isochorismatase
BAV_RS03585	COG0617	tRNA 3'-terminal CCA addition
BAV_RS03595	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BAV_RS03600	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BAV_RS03605	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BAV_RS03610	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BAV_RS03615	COG0586	Pfam SNARE associated Golgi protein
BAV_RS03625	COG0028	Belongs to the TPP enzyme family
BAV_RS03630	COG0579	oxidoreductase
BAV_RS03640	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAV_RS03645	COG0802	atpase or kinase
BAV_RS03650	COG0114	fumarate hydratase activity
BAV_RS03660	COG3181	Tripartite tricarboxylate transporter family receptor
BAV_RS03680	COG1116	anion transmembrane transporter activity
BAV_RS03685	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAV_RS03710	COG0625	glutathione transferase activity
BAV_RS03715	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAV_RS03725	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAV_RS03735	COG2885	chlorophyll binding
BAV_RS03750	COG0840	transmembrane signaling receptor activity
BAV_RS03760	COG5265	(ABC) transporter
BAV_RS03770	COG0833	amino acid
BAV_RS03800	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BAV_RS03810	COG1408	metallophosphoesterase
BAV_RS03830	COG2610	gluconate transmembrane transporter activity
BAV_RS03835	COG0625	glutathione transferase activity
BAV_RS03840	COG2070	2-Nitropropane dioxygenase
BAV_RS03850	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BAV_RS03875	COG0783	Belongs to the Dps family
BAV_RS03895	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
BAV_RS03900	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BAV_RS03905	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BAV_RS03910	COG1845	cytochrome c oxidase, subunit III
BAV_RS03915	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BAV_RS03935	COG1666	GTP binding
BAV_RS03955	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BAV_RS03965	COG1136	(ABC) transporter
BAV_RS04015	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS04020	COG5006	permease, DMT superfamily
BAV_RS04035	COG2264	protein methyltransferase activity
BAV_RS04045	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BAV_RS04050	COG3383	formate dehydrogenase (NAD+) activity
BAV_RS04070	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BAV_RS04080	COG0303	'Molybdopterin
BAV_RS04085	COG0521	Mo-molybdopterin cofactor biosynthetic process
BAV_RS04090	COG0314	molybdopterin synthase activity
BAV_RS04095	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BAV_RS04100	COG0315	cyclic pyranopterin monophosphate synthase activity
BAV_RS04110	COG0678	peroxiredoxin activity
BAV_RS04120	COG0697	spore germination
BAV_RS04125	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BAV_RS04175	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAV_RS04180	COG1702	phosphate starvation-inducible protein PhoH
BAV_RS04185	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BAV_RS04190	COG4535	Mg2 and Co2 transporter CorC
BAV_RS04195	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BAV_RS04200	COG0667	Aldo Keto reductase
BAV_RS04220	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAV_RS04225	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAV_RS04230	COG1862	Preprotein translocase
BAV_RS04235	COG0343	queuine tRNA-ribosyltransferase activity
BAV_RS04240	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BAV_RS04245	COG2027	D-alanyl-D-alanine carboxypeptidase
BAV_RS04250	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BAV_RS04255	COG1648	precorrin-2 dehydrogenase activity
BAV_RS04255	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BAV_RS04285	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BAV_RS04300	COG0436	Aminotransferase
BAV_RS04310	COG0281	malic enzyme
BAV_RS04310	COG0280	phosphate acetyltransferase
BAV_RS04325	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BAV_RS04330	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BAV_RS04335	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAV_RS04340	COG0126	phosphoglycerate kinase activity
BAV_RS04350	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BAV_RS04355	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BAV_RS04370	COG0625	glutathione transferase activity
BAV_RS04400	COG0306	phosphate transporter
BAV_RS04405	COG0521	Mo-molybdopterin cofactor biosynthetic process
BAV_RS04415	COG0739	heme binding
BAV_RS04425	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BAV_RS04435	COG0697	spore germination
BAV_RS04450	COG0456	acetyltransferase
BAV_RS04455	COG1301	dicarboxylic acid transport
BAV_RS04465	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BAV_RS04470	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BAV_RS04475	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BAV_RS04480	COG0009	L-threonylcarbamoyladenylate synthase
BAV_RS04485	COG1414	Transcriptional regulator
BAV_RS04495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAV_RS04505	COG1126	abc transporter atp-binding protein
BAV_RS04510	COG0028	Belongs to the TPP enzyme family
BAV_RS04520	COG1960	acyl-CoA dehydrogenase activity
BAV_RS04525	COG0028	Belongs to the TPP enzyme family
BAV_RS04530	COG0583	DNA-binding transcription factor activity
BAV_RS04535	COG4974	Belongs to the 'phage' integrase family
BAV_RS04540	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BAV_RS04555	COG1686	Belongs to the peptidase S11 family
BAV_RS04580	COG1074	ATP-dependent DNA helicase activity
BAV_RS04585	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BAV_RS04590	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BAV_RS04595	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BAV_RS04605	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BAV_RS04610	COG0505	Belongs to the CarA family
BAV_RS04615	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BAV_RS04620	COG0406	alpha-ribazole phosphatase activity
BAV_RS04630	COG3842	ATPase activity
BAV_RS04650	COG2233	PERMEase
BAV_RS04655	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BAV_RS04665	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BAV_RS04670	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BAV_RS04680	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BAV_RS04700	COG3210	domain, Protein
BAV_RS04700	COG3064	Membrane
BAV_RS04700	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS04725	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAV_RS04745	COG2188	Transcriptional regulator
BAV_RS04775	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BAV_RS04780	COG0066	3-isopropylmalate dehydratase activity
BAV_RS04800	COG1053	succinate dehydrogenase
BAV_RS04800	COG3976	FMN-binding domain protein
BAV_RS04815	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BAV_RS04820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAV_RS04840	COG1473	amidohydrolase
BAV_RS04845	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BAV_RS04850	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAV_RS04865	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAV_RS04890	COG1024	Enoyl-CoA hydratase
BAV_RS04900	COG2267	carboxylic ester hydrolase activity
BAV_RS04910	COG0318	PFAM AMP-dependent synthetase and ligase
BAV_RS04970	COG1271	oxidase subunit
BAV_RS04975	COG1294	oxidase, subunit
BAV_RS04995	COG0154	amidase activity
BAV_RS05000	COG4608	Belongs to the ABC transporter superfamily
BAV_RS05005	COG0444	Belongs to the ABC transporter superfamily
BAV_RS05010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS05015	COG0601	transmembrane transport
BAV_RS05020	COG4166	transmembrane transport
BAV_RS05030	COG3706	GGDEF domain
BAV_RS05050	COG0025	NhaP-type Na H and K H
BAV_RS05080	COG1228	amidohydrolase
BAV_RS05100	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BAV_RS05105	COG0500	methyltransferase
BAV_RS05135	COG2201	protein-glutamate methylesterase activity
BAV_RS05140	COG2203	Gaf domain
BAV_RS05140	COG3706	GGDEF domain
BAV_RS05140	COG4251	negative regulation of phosphorylation
BAV_RS05140	COG5001	Diguanylate cyclase
BAV_RS05145	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
BAV_RS05150	COG4166	transmembrane transport
BAV_RS05165	COG0583	DNA-binding transcription factor activity
BAV_RS05175	COG3181	Tripartite tricarboxylate transporter family receptor
BAV_RS05190	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BAV_RS05215	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BAV_RS05220	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAV_RS05225	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAV_RS05230	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAV_RS05235	COG0649	NAD binding
BAV_RS05240	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BAV_RS05250	COG1034	ATP synthesis coupled electron transport
BAV_RS05255	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BAV_RS05260	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BAV_RS05270	COG0713	ATP synthesis coupled electron transport
BAV_RS05285	COG1007	ATP synthesis coupled electron transport
BAV_RS05300	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BAV_RS05305	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BAV_RS05310	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BAV_RS05315	COG0560	Phosphoserine phosphatase
BAV_RS05320	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BAV_RS05325	COG0450	alkyl hydroperoxide reductase
BAV_RS05340	COG1214	PFAM Peptidase M22, glycoprotease
BAV_RS05345	COG1573	uracil-dna glycosylase
BAV_RS05350	COG0477	Major facilitator Superfamily
BAV_RS05355	COG1196	nuclear chromosome segregation
BAV_RS05365	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BAV_RS05370	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAV_RS05375	COG2917	probably involved in intracellular septation
BAV_RS05380	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BAV_RS05385	COG1122	ATPase activity
BAV_RS05390	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAV_RS05395	COG1268	BioY protein
BAV_RS05455	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BAV_RS05460	COG2878	Part of a membrane complex involved in electron transport
BAV_RS05480	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BAV_RS05485	COG0251	oxidation-reduction process
BAV_RS05495	COG3228	Belongs to the MtfA family
BAV_RS05500	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BAV_RS05515	COG0159	tryptophan synthase activity
BAV_RS05520	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BAV_RS05525	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BAV_RS05540	COG1530	ribonuclease E activity
BAV_RS05550	COG0564	pseudouridine synthase activity
BAV_RS05555	COG0546	phosphoglycolate phosphatase activity
BAV_RS05560	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BAV_RS05565	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
BAV_RS05570	COG3023	N-Acetylmuramoyl-L-alanine amidase
BAV_RS05580	COG0424	maF-like protein
BAV_RS05585	COG1399	metal-binding, possibly nucleic acid-binding protein
BAV_RS05590	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BAV_RS05600	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAV_RS05610	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS05615	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAV_RS05620	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAV_RS05645	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAV_RS05650	COG0481	GTPase activity
BAV_RS05655	COG0681	Belongs to the peptidase S26 family
BAV_RS05660	COG0571	ribonuclease III activity
BAV_RS05665	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BAV_RS05670	COG1381	Involved in DNA repair and RecF pathway recombination
BAV_RS05690	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BAV_RS05700	COG0583	DNA-binding transcription factor activity
BAV_RS05715	COG0583	DNA-binding transcription factor activity
BAV_RS05725	COG0791	NLP P60 protein
BAV_RS05730	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAV_RS05735	COG3193	protein, possibly involved in utilization of glycolate and propanediol
BAV_RS05745	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAV_RS05750	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BAV_RS05785	COG1446	asparaginase
BAV_RS05790	COG4172	Belongs to the ABC transporter superfamily
BAV_RS05795	COG0747	negative chemotaxis
BAV_RS05800	COG0601	transmembrane transport
BAV_RS05805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS05825	COG0504	CTP synthase activity
BAV_RS05830	COG0148	phosphopyruvate hydratase activity
BAV_RS05845	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BAV_RS05855	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAV_RS05875	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAV_RS05890	COG1981	membrane
BAV_RS05905	COG0039	L-malate dehydrogenase activity
BAV_RS05910	COG2188	Transcriptional regulator
BAV_RS05915	COG2009	succinate dehydrogenase
BAV_RS05920	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BAV_RS05925	COG1053	succinate dehydrogenase
BAV_RS05930	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BAV_RS05935	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BAV_RS05940	COG0372	Belongs to the citrate synthase family
BAV_RS05950	COG0583	DNA-binding transcription factor activity
BAV_RS05955	COG3842	ATPase activity
BAV_RS05965	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BAV_RS05970	COG1840	ABC-type Fe3 transport system, periplasmic component
BAV_RS05975	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAV_RS05975	COG2022	thiamine diphosphate biosynthetic process
BAV_RS05985	COG3128	pkhd-type hydroxylase
BAV_RS05990	COG4774	siderophore transport
BAV_RS05995	COG2814	Major facilitator Superfamily
BAV_RS06005	COG0281	malic enzyme
BAV_RS06005	COG0280	phosphate acetyltransferase
BAV_RS06015	COG1297	OPT oligopeptide transporter protein
BAV_RS06020	COG0567	Dehydrogenase, E1 component
BAV_RS06025	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAV_RS06030	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAV_RS06035	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BAV_RS06040	COG1595	DNA-templated transcription, initiation
BAV_RS06045	COG3712	iron ion homeostasis
BAV_RS06050	COG4774	siderophore transport
BAV_RS06075	COG1199	ATP-dependent helicase activity
BAV_RS06080	COG2183	response to ionizing radiation
BAV_RS06090	COG3064	Membrane
BAV_RS06090	COG3210	domain, Protein
BAV_RS06090	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS06100	COG0564	pseudouridine synthase activity
BAV_RS06110	COG3243	poly(R)-hydroxyalkanoic acid synthase
BAV_RS06115	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS06120	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
BAV_RS06135	COG0672	)-iron permease
BAV_RS06160	COG3237	CsbD-like
BAV_RS06165	COG0189	ligase activity
BAV_RS06165	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAV_RS06170	COG0189	ligase activity
BAV_RS06170	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAV_RS06175	COG1132	(ABC) transporter
BAV_RS06185	COG0297	glycogen (starch) synthase activity
BAV_RS06190	COG2833	Protein of unknown function (DUF455)
BAV_RS06195	COG2951	lytic endotransglycosylase activity
BAV_RS06210	COG0586	Pfam SNARE associated Golgi protein
BAV_RS06225	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BAV_RS06230	COG0463	Glycosyl transferase, family 2
BAV_RS06240	COG3958	Transketolase
BAV_RS06245	COG3959	Transketolase, thiamine diphosphate binding domain
BAV_RS06270	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BAV_RS06295	COG3971	2-oxopent-4-enoate hydratase activity
BAV_RS06310	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAV_RS06315	COG1012	belongs to the aldehyde dehydrogenase family
BAV_RS06335	COG0154	amidase activity
BAV_RS06370	COG0582	viral genome integration into host DNA
BAV_RS06405	COG2974	May be involved in recombination
BAV_RS06465	COG1396	sequence-specific DNA binding
BAV_RS06490	COG3756	Protein conserved in bacteria
BAV_RS06535	COG3728	DNA packaging
BAV_RS06540	COG5410	chromosome segregation
BAV_RS06550	COG2369	cell adhesion
BAV_RS06690	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BAV_RS06705	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BAV_RS06715	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAV_RS06725	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BAV_RS06730	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BAV_RS06750	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BAV_RS06755	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
BAV_RS06760	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAV_RS06775	COG2951	lytic endotransglycosylase activity
BAV_RS06795	COG2985	domain, Protein
BAV_RS06800	COG1960	acyl-CoA dehydrogenase activity
BAV_RS06805	COG0450	alkyl hydroperoxide reductase
BAV_RS06825	COG0335	large ribosomal subunit rRNA binding
BAV_RS06835	COG3622	Belongs to the hyi family
BAV_RS06840	COG1162	GTPase activity
BAV_RS06845	COG0501	Belongs to the peptidase M48B family
BAV_RS06850	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BAV_RS06855	COG3327	negative regulation of DNA-templated transcription, initiation
BAV_RS06860	COG3396	Phenylacetate-CoA oxygenase
BAV_RS06865	COG3460	Phenylacetate-CoA oxygenase
BAV_RS06870	COG3396	Phenylacetate-CoA oxygenase
BAV_RS06875	COG2151	metal-sulfur cluster biosynthetic enzyme
BAV_RS06880	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BAV_RS06890	COG1024	Enoyl-CoA hydratase
BAV_RS06895	COG2050	protein possibly involved in aromatic compounds catabolism
BAV_RS06915	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAV_RS06920	COG2197	response regulator
BAV_RS06925	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAV_RS06930	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BAV_RS06945	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAV_RS06950	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BAV_RS06955	COG1914	H( )-stimulated, divalent metal cation uptake system
BAV_RS06960	COG2423	ornithine cyclodeaminase activity
BAV_RS06970	COG0756	dUTP diphosphatase activity
BAV_RS06995	COG1522	sequence-specific DNA binding
BAV_RS07005	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAV_RS07010	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BAV_RS07015	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BAV_RS07020	COG0196	riboflavin kinase activity
BAV_RS07025	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BAV_RS07030	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BAV_RS07030	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BAV_RS07045	COG0210	DNA helicase
BAV_RS07050	COG0488	(ABC) transporter
BAV_RS07055	COG2890	protein-(glutamine-N5) methyltransferase activity
BAV_RS07060	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAV_RS07065	COG2171	N-acyltransferase activity
BAV_RS07080	COG0582	viral genome integration into host DNA
BAV_RS07085	COG3723	Recombinational DNA repair protein, rece pathway
BAV_RS07090	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BAV_RS07220	COG1802	Transcriptional regulator
BAV_RS07220	COG4626	Terminase
BAV_RS07340	COG2944	sequence-specific DNA binding
BAV_RS07370	COG1278	Cold shock
BAV_RS07380	COG1278	Cold shock
BAV_RS07390	COG0544	peptidyl-prolyl cis-trans isomerase activity
BAV_RS07395	COG0740	serine-type endopeptidase activity
BAV_RS07400	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BAV_RS07405	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BAV_RS07415	COG3135	benzoate transporter
BAV_RS07420	COG2814	Major facilitator Superfamily
BAV_RS07425	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BAV_RS07435	COG0556	nucleotide-excision repair
BAV_RS07440	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAV_RS07450	COG1104	cysteine desulfurase activity
BAV_RS07455	COG0822	iron-sulfur transferase activity
BAV_RS07465	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BAV_RS07470	COG0443	Heat shock 70 kDa protein
BAV_RS07475	COG0633	Ferredoxin
BAV_RS07480	COG2975	iron-sulfur cluster assembly
BAV_RS07485	COG1803	Methylglyoxal synthase
BAV_RS07495	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BAV_RS07500	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS07505	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BAV_RS07510	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BAV_RS07525	COG1136	(ABC) transporter
BAV_RS07530	COG0084	hydrolase, TatD family'
BAV_RS07545	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BAV_RS07545	COG2010	Cytochrome c
BAV_RS07550	COG1335	isochorismatase
BAV_RS07555	COG2309	aminopeptidase activity
BAV_RS07560	COG0596	Alpha beta hydrolase
BAV_RS07565	COG3473	Maleate cis-trans isomerase
BAV_RS07575	COG2080	2 iron, 2 sulfur cluster binding
BAV_RS07580	COG2010	Cytochrome c
BAV_RS07580	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BAV_RS07585	COG0477	Major facilitator Superfamily
BAV_RS07590	COG1846	Transcriptional regulator
BAV_RS07600	COG2271	Major facilitator Superfamily
BAV_RS07610	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BAV_RS07620	COG2200	EAL domain
BAV_RS07630	COG0613	PHP domain protein
BAV_RS07640	COG0047	phosphoribosylformylglycinamidine synthase activity
BAV_RS07640	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BAV_RS07655	COG3210	domain, Protein
BAV_RS07655	COG3064	Membrane
BAV_RS07655	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS07655	COG3210	domain, Protein
BAV_RS07655	COG3064	Membrane
BAV_RS07655	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS07695	COG0747	negative chemotaxis
BAV_RS07700	COG4608	Belongs to the ABC transporter superfamily
BAV_RS07710	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS07715	COG0601	transmembrane transport
BAV_RS07720	COG2072	flavoprotein involved in K transport
BAV_RS07740	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BAV_RS07740	COG0519	Catalyzes the synthesis of GMP from XMP
BAV_RS07785	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BAV_RS07795	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BAV_RS07800	COG2146	nitrite reductase [NAD(P)H] activity
BAV_RS07805	COG0446	pyridine nucleotide-disulphide oxidoreductase
BAV_RS07815	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
BAV_RS07820	COG1846	Transcriptional regulator
BAV_RS07825	COG0477	Major facilitator Superfamily
BAV_RS07830	COG3608	succinylglutamate desuccinylase aspartoacylase
BAV_RS07830	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BAV_RS07845	COG3046	protein related to deoxyribodipyrimidine photolyase
BAV_RS07850	COG0415	Belongs to the DNA photolyase family
BAV_RS07855	COG0322	excinuclease ABC activity
BAV_RS07885	COG0302	gtp cyclohydrolase
BAV_RS07890	COG0789	Transcriptional regulator
BAV_RS07895	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BAV_RS07900	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
BAV_RS07910	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BAV_RS07920	COG0596	Alpha beta hydrolase
BAV_RS07930	COG2814	Major facilitator Superfamily
BAV_RS07935	COG0640	Transcriptional regulator
BAV_RS07945	COG0833	amino acid
BAV_RS07950	COG2814	Major facilitator Superfamily
BAV_RS07990	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BAV_RS08015	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
BAV_RS08025	COG0390	transport system, permease component
BAV_RS08065	COG0165	Argininosuccinate lyase
BAV_RS08070	COG0668	transmembrane transport
BAV_RS08105	COG0747	negative chemotaxis
BAV_RS08110	COG0601	transmembrane transport
BAV_RS08115	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS08120	COG4172	Belongs to the ABC transporter superfamily
BAV_RS08125	COG1280	lysine exporter protein (LysE YggA)
BAV_RS08135	COG3161	chorismate lyase activity
BAV_RS08140	COG1187	pseudouridine synthase activity
BAV_RS08150	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BAV_RS08175	COG1999	signal sequence binding
BAV_RS08180	COG0339	signal peptide processing
BAV_RS08185	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BAV_RS08190	COG4566	intracellular signal transduction
BAV_RS08200	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BAV_RS08205	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAV_RS08210	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAV_RS08255	COG0745	RESPONSE REGULATOR receiver
BAV_RS08260	COG0643	Histidine kinase
BAV_RS08260	COG2198	Histidine kinase
BAV_RS08270	COG0840	transmembrane signaling receptor activity
BAV_RS08275	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAV_RS08280	COG2201	protein-glutamate methylesterase activity
BAV_RS08285	COG0745	RESPONSE REGULATOR receiver
BAV_RS08290	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
BAV_RS08315	COG2747	anti-sigma28 factor FlgM
BAV_RS08325	COG1815	bacterial-type flagellum-dependent cell motility
BAV_RS08340	COG1749	Flagellar hook protein flgE
BAV_RS08345	COG4787	bacterial-type flagellum-dependent cell motility
BAV_RS08360	COG1706	bacterial-type flagellum-dependent cell motility
BAV_RS08380	COG0840	transmembrane signaling receptor activity
BAV_RS08385	COG0840	transmembrane signaling receptor activity
BAV_RS08395	COG0840	transmembrane signaling receptor activity
BAV_RS08400	COG0840	transmembrane signaling receptor activity
BAV_RS08435	COG1580	Controls the rotational direction of flagella during chemotaxis
BAV_RS08455	COG1317	bacterial-type flagellum organization
BAV_RS08460	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAV_RS08465	COG1766	The M ring may be actively involved in energy transduction
BAV_RS08470	COG1677	Flagellar hook-basal body complex protein FliE
BAV_RS08480	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAV_RS08500	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BAV_RS08510	COG0285	dihydrofolate synthase activity
BAV_RS08520	COG1286	toxin biosynthetic process
BAV_RS08530	COG5383	Protein conserved in bacteria
BAV_RS08540	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BAV_RS08545	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BAV_RS08550	COG0024	Methionine aminopeptidase
BAV_RS08555	COG0052	Belongs to the universal ribosomal protein uS2 family
BAV_RS08560	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BAV_RS08565	COG0528	UMP kinase activity
BAV_RS08570	COG0233	cytoplasmic translational termination
BAV_RS08575	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BAV_RS08580	COG0575	Belongs to the CDS family
BAV_RS08585	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BAV_RS08590	COG0750	zinc metalloprotease
BAV_RS08595	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BAV_RS08600	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BAV_RS08605	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BAV_RS08610	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BAV_RS08620	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BAV_RS08625	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BAV_RS08630	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAV_RS08640	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BAV_RS08665	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BAV_RS08670	COG2867	negative regulation of translational initiation
BAV_RS08675	COG2914	Belongs to the UPF0125 (RnfH) family
BAV_RS08680	COG1960	acyl-CoA dehydrogenase activity
BAV_RS08685	COG1024	Enoyl-CoA hydratase
BAV_RS08685	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAV_RS08705	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BAV_RS08710	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BAV_RS08720	COG0084	hydrolase, TatD family'
BAV_RS08760	COG3121	Chaperone
BAV_RS08770	COG3539	Fimbrial protein
BAV_RS08780	COG0833	amino acid
BAV_RS08815	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAV_RS08840	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAV_RS08845	COG0456	acetyltransferase
BAV_RS08855	COG2900	Belongs to the SlyX family
BAV_RS08860	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAV_RS08870	COG0519	Catalyzes the synthesis of GMP from XMP
BAV_RS08870	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BAV_RS08875	COG0583	DNA-binding transcription factor activity
BAV_RS08880	COG0477	Major facilitator Superfamily
BAV_RS08905	COG3258	Cytochrome c
BAV_RS08935	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BAV_RS08940	COG1129	ABC transporter
BAV_RS08940	COG0842	Transport permease protein
BAV_RS08945	COG0842	Transport permease protein
BAV_RS08955	COG2259	Doxx family
BAV_RS08980	COG0154	amidase activity
BAV_RS08985	COG0477	Major facilitator Superfamily
BAV_RS08995	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BAV_RS09015	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAV_RS09030	COG0386	Belongs to the glutathione peroxidase family
BAV_RS09040	COG0095	Lipoate-protein ligase
BAV_RS09050	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAV_RS09055	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAV_RS09060	COG0477	Major facilitator Superfamily
BAV_RS09065	COG2391	methyltransferase activity
BAV_RS09070	COG2897	thiosulfate sulfurtransferase activity
BAV_RS09085	COG0431	NADPH-dependent FMN reductase
BAV_RS09090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAV_RS09095	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAV_RS09100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAV_RS09110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS09125	COG1695	Transcriptional regulator
BAV_RS09135	COG2819	hydrolase of the alpha beta superfamily
BAV_RS09185	COG1126	abc transporter atp-binding protein
BAV_RS09190	COG0765	amino acid transport
BAV_RS09195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAV_RS09205	COG2200	EAL domain
BAV_RS09220	COG1253	flavin adenine dinucleotide binding
BAV_RS09225	COG5001	Diguanylate cyclase
BAV_RS09225	COG3706	GGDEF domain
BAV_RS09225	COG2203	Gaf domain
BAV_RS09225	COG4251	negative regulation of phosphorylation
BAV_RS09230	COG2197	response regulator
BAV_RS09250	COG2186	Transcriptional regulator
BAV_RS09255	COG0028	Belongs to the TPP enzyme family
BAV_RS09265	COG0688	phosphatidylethanolamine metabolic process
BAV_RS09275	COG1464	Belongs to the NlpA lipoprotein family
BAV_RS09290	COG2363	Small membrane protein
BAV_RS09295	COG0697	spore germination
BAV_RS09300	COG0625	glutathione transferase activity
BAV_RS09305	COG1794	racemase activity, acting on amino acids and derivatives
BAV_RS09325	COG0559	Belongs to the binding-protein-dependent transport system permease family
BAV_RS09340	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BAV_RS09350	COG1653	transport
BAV_RS09355	COG1175	transmembrane transport
BAV_RS09360	COG0395	ABC-type sugar transport system, permease component
BAV_RS09365	COG3842	ATPase activity
BAV_RS09380	COG0783	Belongs to the Dps family
BAV_RS09390	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BAV_RS09405	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAV_RS09415	COG0625	glutathione transferase activity
BAV_RS09435	COG2186	Transcriptional regulator
BAV_RS09450	COG0583	DNA-binding transcription factor activity
BAV_RS09455	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BAV_RS09470	COG1840	ABC-type Fe3 transport system, periplasmic component
BAV_RS09480	COG3842	ATPase activity
BAV_RS09485	COG1741	Belongs to the pirin family
BAV_RS09490	COG1741	Belongs to the pirin family
BAV_RS09495	COG0583	DNA-binding transcription factor activity
BAV_RS09505	COG3852	Histidine kinase
BAV_RS09510	COG0174	glutamine synthetase
BAV_RS09515	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAV_RS09520	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BAV_RS09525	COG5001	Diguanylate cyclase
BAV_RS09525	COG3300	MHYT domain
BAV_RS09530	COG0840	transmembrane signaling receptor activity
BAV_RS09540	COG1561	YicC-like family, N-terminal region
BAV_RS09545	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAV_RS09550	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BAV_RS09560	COG0653	protein targeting
BAV_RS09600	COG4585	Histidine kinase
BAV_RS09615	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BAV_RS09620	COG0791	NLP P60 protein
BAV_RS09625	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS09630	COG0194	GDP metabolic process
BAV_RS09635	COG1758	RNA polymerase activity
BAV_RS09640	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BAV_RS09645	COG1126	abc transporter atp-binding protein
BAV_RS09650	COG0765	amino acid transport
BAV_RS09655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAV_RS09660	COG2831	hemolysin activation secretion protein
BAV_RS09670	COG3188	usher protein
BAV_RS09675	COG3121	Chaperone
BAV_RS09685	COG3210	domain, Protein
BAV_RS09685	COG3210	domain, Protein
BAV_RS09685	COG3064	Membrane
BAV_RS09685	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS09685	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS09685	COG3064	Membrane
BAV_RS09690	COG4181	ATPase activity
BAV_RS09700	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAV_RS09705	COG0584	glycerophosphoryl diester phosphodiesterase
BAV_RS09710	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BAV_RS09720	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BAV_RS09720	COG0678	peroxiredoxin activity
BAV_RS09735	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAV_RS09755	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BAV_RS09760	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BAV_RS09765	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BAV_RS09770	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BAV_RS09775	COG2252	PERMEase
BAV_RS09780	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAV_RS09785	COG3118	belongs to the thioredoxin family
BAV_RS09815	COG0488	(ABC) transporter
BAV_RS09820	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAV_RS09840	COG1320	monovalent cation:proton antiporter activity
BAV_RS09845	COG2212	antiporter activity
BAV_RS09850	COG1863	multisubunit Na H antiporter MnhE subunit
BAV_RS09855	COG0651	ATP synthesis coupled electron transport
BAV_RS09860	COG1006	Multisubunit Na H antiporter MnhC subunit
BAV_RS09865	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAV_RS09865	COG2111	Na H antiporter
BAV_RS09880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAV_RS09900	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAV_RS09910	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BAV_RS09915	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BAV_RS09950	COG0602	queuosine metabolic process
BAV_RS09955	COG0720	synthase
BAV_RS09965	COG1289	transmembrane transporter activity
BAV_RS09975	COG1566	PFAM secretion protein HlyD family protein
BAV_RS09985	COG0400	carboxylic ester hydrolase activity
BAV_RS10000	COG0587	DNA-directed DNA polymerase activity
BAV_RS10005	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAV_RS10020	COG1610	YqeY-like protein
BAV_RS10050	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BAV_RS10100	COG3193	protein, possibly involved in utilization of glycolate and propanediol
BAV_RS10125	COG1522	sequence-specific DNA binding
BAV_RS10140	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAV_RS10165	COG0776	regulation of translation
BAV_RS10170	COG0072	phenylalanine-tRNA ligase activity
BAV_RS10170	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAV_RS10175	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BAV_RS10180	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BAV_RS10185	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BAV_RS10195	COG2960	long-chain fatty acid transporting porin activity
BAV_RS10215	COG0004	ammonium transporteR
BAV_RS10245	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BAV_RS10260	COG1090	epimerase
BAV_RS10265	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BAV_RS10265	COG0506	proline dehydrogenase activity
BAV_RS10265	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BAV_RS10275	COG3008	intermembrane lipid transfer
BAV_RS10280	COG2995	paraquat-inducible protein a
BAV_RS10285	COG0542	response to heat
BAV_RS10290	COG4953	penicillin-binding protein 1C
BAV_RS10300	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BAV_RS10305	COG1278	Cold shock
BAV_RS10315	COG0183	Belongs to the thiolase family
BAV_RS10320	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAV_RS10325	COG1570	exodeoxyribonuclease VII activity
BAV_RS10330	COG0811	peptide transport
BAV_RS10340	COG1663	tetraacyldisaccharide 4'-kinase activity
BAV_RS10345	COG2835	tetraacyldisaccharide 4'-kinase activity
BAV_RS10350	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BAV_RS10355	COG0563	adenylate kinase activity
BAV_RS10365	COG0728	peptidoglycan biosynthetic process
BAV_RS10375	COG0268	Binds directly to 16S ribosomal RNA
BAV_RS10380	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAV_RS10390	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAV_RS10395	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BAV_RS10410	COG3158	transport of potassium into the cell
BAV_RS10415	COG0642	Histidine kinase
BAV_RS10445	COG0776	regulation of translation
BAV_RS10450	COG0626	cystathionine gamma-synthase activity
BAV_RS10455	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAV_RS10460	COG0557	exoribonuclease II activity
BAV_RS10490	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAV_RS10495	COG2391	methyltransferase activity
BAV_RS10505	COG0583	DNA-binding transcription factor activity
BAV_RS10510	COG0069	glutamate synthase activity
BAV_RS10520	COG3706	GGDEF domain
BAV_RS10525	COG3706	GGDEF domain
BAV_RS10535	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAV_RS10560	COG3909	cytochrome
BAV_RS10570	COG0625	glutathione transferase activity
BAV_RS10575	COG0730	response to heat
BAV_RS10580	COG0482	sulfurtransferase activity
BAV_RS10600	COG0247	lactate metabolic process
BAV_RS10605	COG0277	FAD linked oxidase domain protein
BAV_RS10610	COG0277	FAD linked oxidase domain protein
BAV_RS10615	COG0277	FAD linked oxidase domain protein
BAV_RS10620	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BAV_RS10625	COG0312	modulator of DNA gyrase
BAV_RS10640	COG0308	aminopeptidase N
BAV_RS10645	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
BAV_RS10660	COG3064	Membrane
BAV_RS10660	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS10660	COG3210	domain, Protein
BAV_RS10680	COG0436	Aminotransferase
BAV_RS10685	COG3737	Protein of unknown function (DUF498/DUF598)
BAV_RS10690	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BAV_RS10695	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BAV_RS10700	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BAV_RS10710	COG0305	Participates in initiation and elongation during chromosome replication
BAV_RS10720	COG0359	binds to the 23S rRNA
BAV_RS10725	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BAV_RS10730	COG2965	DNA replication, synthesis of RNA primer
BAV_RS10735	COG0360	Binds together with S18 to 16S ribosomal RNA
BAV_RS10740	COG1469	GTP cyclohydrolase I activity
BAV_RS10745	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BAV_RS10750	COG0142	geranyltranstransferase activity
BAV_RS10755	COG1722	exodeoxyribonuclease VII activity
BAV_RS10780	COG0501	Belongs to the peptidase M48B family
BAV_RS10795	COG0697	spore germination
BAV_RS10805	COG1846	Transcriptional regulator
BAV_RS10810	COG1538	Outer membrane efflux protein
BAV_RS10815	COG1566	PFAM secretion protein HlyD family protein
BAV_RS10820	COG2814	Major facilitator Superfamily
BAV_RS10825	COG0473	3-isopropylmalate dehydrogenase activity
BAV_RS10835	COG0747	negative chemotaxis
BAV_RS10840	COG0601	transmembrane transport
BAV_RS10845	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS10855	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAV_RS10880	COG1012	belongs to the aldehyde dehydrogenase family
BAV_RS10885	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BAV_RS10890	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAV_RS10895	COG0217	transcriptional regulatory protein
BAV_RS10900	COG0151	Belongs to the GarS family
BAV_RS10910	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BAV_RS10915	COG0799	negative regulation of ribosome biogenesis
BAV_RS10920	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BAV_RS10925	COG0424	maF-like protein
BAV_RS10945	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAV_RS10945	COG2169	Transcriptional regulator
BAV_RS10950	COG1301	dicarboxylic acid transport
BAV_RS10955	COG4191	Histidine kinase
BAV_RS10960	COG2204	response regulator
BAV_RS10975	COG1418	mRNA catabolic process
BAV_RS10980	COG0500	methyltransferase
BAV_RS10985	COG0477	Major facilitator Superfamily
BAV_RS10995	COG0583	DNA-binding transcription factor activity
BAV_RS11025	COG1530	ribonuclease E activity
BAV_RS11030	COG1132	(ABC) transporter
BAV_RS11045	COG0297	glycogen (starch) synthase activity
BAV_RS11055	COG0297	glycogen (starch) synthase activity
BAV_RS11060	COG0463	Glycosyl transferase, family 2
BAV_RS11065	COG0726	polysaccharide deacetylase
BAV_RS11070	COG0438	transferase activity, transferring glycosyl groups
BAV_RS11085	COG1643	Atp-dependent helicase
BAV_RS11090	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BAV_RS11090	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BAV_RS11095	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BAV_RS11105	COG0704	Plays a role in the regulation of phosphate uptake
BAV_RS11110	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BAV_RS11115	COG1322	Protein conserved in bacteria
BAV_RS11125	COG2094	Belongs to the DNA glycosylase MPG family
BAV_RS11135	COG1177	transmembrane transport
BAV_RS11140	COG1176	ABC-type spermidine putrescine transport system, permease component I
BAV_RS11145	COG3842	ATPase activity
BAV_RS11155	COG3642	lipopolysaccharide core region biosynthetic process
BAV_RS11165	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BAV_RS11170	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BAV_RS11205	COG0135	phosphoribosylanthranilate isomerase activity
BAV_RS11210	COG0101	tRNA pseudouridine synthase activity
BAV_RS11220	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BAV_RS11225	COG0473	3-isopropylmalate dehydrogenase activity
BAV_RS11230	COG0066	3-isopropylmalate dehydratase activity
BAV_RS11240	COG0501	Belongs to the peptidase M48B family
BAV_RS11245	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BAV_RS11255	COG2205	protein histidine kinase activity
BAV_RS11265	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BAV_RS11270	COG1295	ribonuclease BN
BAV_RS11280	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAV_RS11285	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAV_RS11345	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BAV_RS11360	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BAV_RS11380	COG0181	hydroxymethylbilane synthase activity
BAV_RS11390	COG0861	Integral membrane protein TerC family
BAV_RS11395	COG0861	Integral membrane protein TerC family
BAV_RS11400	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BAV_RS11405	COG0045	succinate-CoA ligase (ADP-forming) activity
BAV_RS11415	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BAV_RS11425	COG2137	regulation of response to DNA damage stimulus
BAV_RS11430	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BAV_RS11445	COG0477	Major facilitator Superfamily
BAV_RS11450	COG2974	May be involved in recombination
BAV_RS11455	COG0540	Belongs to the ATCase OTCase family
BAV_RS11485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAV_RS11500	COG3437	response regulator, receiver
BAV_RS11500	COG2770	Histidine kinase
BAV_RS11515	COG1278	Cold shock
BAV_RS11540	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BAV_RS11550	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BAV_RS11555	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BAV_RS11560	COG0330	HflC and HflK could
BAV_RS11565	COG0330	HflC and HflK could
BAV_RS11570	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAV_RS11575	COG1923	regulation of RNA biosynthetic process
BAV_RS11580	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAV_RS11585	COG1160	GTP binding
BAV_RS11590	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BAV_RS11595	COG2976	Protein conserved in bacteria
BAV_RS11600	COG0124	histidyl-tRNA synthetase
BAV_RS11615	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BAV_RS11620	COG0105	UTP biosynthetic process
BAV_RS11625	COG0525	valine-tRNA ligase activity
BAV_RS11630	COG0336	Belongs to the RNA methyltransferase TrmD family
BAV_RS11635	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BAV_RS11640	COG0228	four-way junction DNA binding
BAV_RS11650	COG0425	Belongs to the sulfur carrier protein TusA family
BAV_RS11655	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BAV_RS11705	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAV_RS11710	COG0543	2 iron, 2 sulfur cluster binding
BAV_RS11710	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BAV_RS11715	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BAV_RS11720	COG2076	Multidrug Resistance protein
BAV_RS11725	COG0633	Ferredoxin
BAV_RS11725	COG3217	Mosc domain protein beta barrel domain protein
BAV_RS11730	COG5285	phytanoyl-CoA dioxygenase
BAV_RS11735	COG0662	Cupin 2, conserved barrel domain protein
BAV_RS11745	COG0456	acetyltransferase
BAV_RS11775	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BAV_RS11785	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BAV_RS11790	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BAV_RS11795	COG1760	l-serine dehydratase
BAV_RS11800	COG1283	sodium-dependent phosphate transmembrane transporter activity
BAV_RS11805	COG0412	Dienelactone hydrolase
BAV_RS11815	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAV_RS11815	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAV_RS11820	COG1611	Belongs to the LOG family
BAV_RS11830	COG1217	gtp-binding protein TYPA
BAV_RS11835	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BAV_RS11840	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BAV_RS11845	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BAV_RS11850	COG2251	uridine kinase activity
BAV_RS11850	COG0195	Participates in both transcription termination and antitermination
BAV_RS11855	COG0779	Required for maturation of 30S ribosomal subunits
BAV_RS11865	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BAV_RS11875	COG0523	cobalamin synthesis protein
BAV_RS11890	COG0625	glutathione transferase activity
BAV_RS11895	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BAV_RS11905	COG2003	Belongs to the UPF0758 family
BAV_RS11910	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BAV_RS11915	COG3483	tryptophan 2,3-dioxygenase activity
BAV_RS11955	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS11960	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAV_RS11965	COG1562	ergosterol biosynthetic process
BAV_RS11970	COG1562	ergosterol biosynthetic process
BAV_RS11975	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
BAV_RS11980	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAV_RS11990	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BAV_RS11995	COG0583	DNA-binding transcription factor activity
BAV_RS12000	COG0542	response to heat
BAV_RS12005	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAV_RS12020	COG0494	nUDIX hydrolase
BAV_RS12030	COG0583	DNA-binding transcription factor activity
BAV_RS12035	COG3530	Putative quorum-sensing-regulated virulence factor
BAV_RS12070	COG2814	Major facilitator Superfamily
BAV_RS12075	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
BAV_RS12085	COG0628	permease
BAV_RS12090	COG0842	Transport permease protein
BAV_RS12095	COG1131	(ABC) transporter
BAV_RS12100	COG1764	response to oxidative stress
BAV_RS12105	COG1846	Transcriptional regulator
BAV_RS12110	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAV_RS12115	COG0156	8-amino-7-oxononanoate synthase activity
BAV_RS12125	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BAV_RS12125	COG4106	trans-aconitate 2-methyltransferase activity
BAV_RS12140	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BAV_RS12140	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BAV_RS12150	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BAV_RS12155	COG0322	excinuclease ABC activity
BAV_RS12160	COG1472	Belongs to the glycosyl hydrolase 3 family
BAV_RS12165	COG0736	holo-[acyl-carrier-protein] synthase activity
BAV_RS12170	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BAV_RS12180	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAV_RS12185	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BAV_RS12190	COG0745	RESPONSE REGULATOR receiver
BAV_RS12205	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BAV_RS12210	COG4149	molybdate abc transporter
BAV_RS12215	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAV_RS12220	COG1122	ATPase activity
BAV_RS12225	COG4120	Belongs to the binding-protein-dependent transport system permease family
BAV_RS12230	COG2984	ABC transporter substrate binding protein
BAV_RS12240	COG2032	superoxide dismutase activity
BAV_RS12255	COG0183	Belongs to the thiolase family
BAV_RS12265	COG4175	Glycine betaine
BAV_RS12265	COG3448	diguanylate cyclase activity
BAV_RS12270	COG4176	ABC-type proline glycine betaine transport system permease component
BAV_RS12280	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BAV_RS12285	COG2814	Major facilitator Superfamily
BAV_RS12290	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BAV_RS12295	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BAV_RS12320	COG2814	Major facilitator Superfamily
BAV_RS12325	COG0495	leucyl-tRNA aminoacylation
BAV_RS12340	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BAV_RS12355	COG0154	amidase activity
BAV_RS12395	COG0427	acetyl-CoA hydrolase
BAV_RS12400	COG0583	DNA-binding transcription factor activity
BAV_RS12405	COG3264	Mechanosensitive ion channel
BAV_RS12405	COG1511	domain protein
BAV_RS12415	COG0697	spore germination
BAV_RS12440	COG0243	molybdopterin cofactor binding
BAV_RS12460	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BAV_RS12465	COG3384	dioxygenase
BAV_RS12480	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BAV_RS12485	COG4221	oxidoreductase activity
BAV_RS12495	COG2814	Major facilitator Superfamily
BAV_RS12565	COG3300	MHYT domain
BAV_RS12565	COG5001	Diguanylate cyclase
BAV_RS12585	COG4172	Belongs to the ABC transporter superfamily
BAV_RS12590	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS12595	COG0601	transmembrane transport
BAV_RS12600	COG0747	negative chemotaxis
BAV_RS12610	COG0598	Magnesium transport protein CorA
BAV_RS12615	COG0210	DNA helicase
BAV_RS12620	COG1801	Protein of unknown function DUF72
BAV_RS12630	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAV_RS12635	COG1012	belongs to the aldehyde dehydrogenase family
BAV_RS12640	COG0483	inositol monophosphate 1-phosphatase activity
BAV_RS12645	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BAV_RS12650	COG1045	serine acetyltransferase
BAV_RS12655	COG1024	Enoyl-CoA hydratase
BAV_RS12655	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAV_RS12660	COG0183	Belongs to the thiolase family
BAV_RS12675	COG1902	pentaerythritol trinitrate reductase activity
BAV_RS12700	COG0527	aspartate kinase activity
BAV_RS12710	COG0825	malonyl-CoA metabolic process
BAV_RS12720	COG0215	cysteine-tRNA ligase activity
BAV_RS12730	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BAV_RS12735	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BAV_RS12740	COG1968	undecaprenyl-diphosphatase activity
BAV_RS12745	COG1253	flavin adenine dinucleotide binding
BAV_RS12750	COG0483	inositol monophosphate 1-phosphatase activity
BAV_RS12780	COG0668	transmembrane transport
BAV_RS12825	COG1802	Transcriptional regulator
BAV_RS12845	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BAV_RS12850	COG2850	peptidyl-arginine hydroxylation
BAV_RS12860	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BAV_RS12865	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BAV_RS12870	COG1994	Peptidase M50
BAV_RS12875	COG0009	L-threonylcarbamoyladenylate synthase
BAV_RS12905	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BAV_RS12920	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAV_RS12925	COG1404	Belongs to the peptidase S8 family
BAV_RS12975	COG1522	sequence-specific DNA binding
BAV_RS12985	COG0531	amino acid
BAV_RS13025	COG0457	Tetratricopeptide repeat
BAV_RS13030	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BAV_RS13035	COG1215	transferase activity, transferring glycosyl groups
BAV_RS13040	COG1215	transferase activity, transferring glycosyl groups
BAV_RS13045	COG1215	transferase activity, transferring glycosyl groups
BAV_RS13050	COG1192	Involved in chromosome partitioning
BAV_RS13080	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
BAV_RS13085	COG1596	polysaccharide export
BAV_RS13110	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS13150	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BAV_RS13160	COG4604	ABC transporter, ATP-binding protein
BAV_RS13165	COG4605	iron ion homeostasis
BAV_RS13170	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAV_RS13175	COG4607	ABC-type enterochelin transport system periplasmic component
BAV_RS13180	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAV_RS13185	COG0149	triose-phosphate isomerase activity
BAV_RS13190	COG3321	synthase
BAV_RS13190	COG0604	alcohol dehydrogenase
BAV_RS13190	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS13220	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BAV_RS13230	COG0154	amidase activity
BAV_RS13235	COG1185	polyribonucleotide nucleotidyltransferase activity
BAV_RS13240	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BAV_RS13250	COG1183	phosphatidylcholine synthase activity
BAV_RS13255	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BAV_RS13260	COG0440	acetolactate synthase activity
BAV_RS13265	COG0028	Belongs to the TPP enzyme family
BAV_RS13270	COG1289	transmembrane transporter activity
BAV_RS13275	COG3022	response to hydroperoxide
BAV_RS13280	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS13290	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAV_RS13295	COG0640	Transcriptional regulator
BAV_RS13315	COG5002	protein histidine kinase activity
BAV_RS13315	COG5001	Diguanylate cyclase
BAV_RS13335	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BAV_RS13340	COG0531	amino acid
BAV_RS13345	COG1982	Orn Lys Arg decarboxylase major
BAV_RS13360	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BAV_RS13370	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BAV_RS13375	COG1674	ftsk spoiiie
BAV_RS13380	COG0492	ferredoxin-NADP+ reductase activity
BAV_RS13385	COG1193	negative regulation of DNA recombination
BAV_RS13395	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAV_RS13410	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BAV_RS13415	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BAV_RS13420	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
BAV_RS13425	COG2205	protein histidine kinase activity
BAV_RS13430	COG0745	RESPONSE REGULATOR receiver
BAV_RS13445	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BAV_RS13460	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BAV_RS13475	COG0612	Peptidase, M16
BAV_RS13480	COG0484	heat shock protein binding
BAV_RS13485	COG0443	Heat shock 70 kDa protein
BAV_RS13495	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BAV_RS13500	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BAV_RS13505	COG1420	regulation of RNA biosynthetic process
BAV_RS13510	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAV_RS13515	COG0497	DNA recombination
BAV_RS13520	COG0735	belongs to the Fur family
BAV_RS13525	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BAV_RS13550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAV_RS13555	COG1683	Conserved Protein
BAV_RS13570	COG2828	Protein conserved in bacteria
BAV_RS13575	COG1280	lysine exporter protein (LysE YggA)
BAV_RS13615	COG1335	isochorismatase
BAV_RS13620	COG2309	aminopeptidase activity
BAV_RS13625	COG0596	Alpha beta hydrolase
BAV_RS13630	COG3473	Maleate cis-trans isomerase
BAV_RS13660	COG0583	DNA-binding transcription factor activity
BAV_RS13670	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
BAV_RS13675	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BAV_RS13680	COG0167	dihydroorotate dehydrogenase activity
BAV_RS13695	COG1414	Transcriptional regulator
BAV_RS13700	COG1058	Belongs to the CinA family
BAV_RS13700	COG1546	Belongs to the CinA family
BAV_RS13715	COG0513	Belongs to the DEAD box helicase family
BAV_RS13740	COG0429	hydrolase of the alpha beta-hydrolase fold
BAV_RS13745	COG4783	chaperone-mediated protein folding
BAV_RS13755	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BAV_RS13775	COG0006	proline dipeptidase activity
BAV_RS13780	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAV_RS13800	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BAV_RS13805	COG0632	four-way junction helicase activity
BAV_RS13815	COG2255	four-way junction helicase activity
BAV_RS13820	COG0514	ATP-dependent DNA helicase (RecQ)
BAV_RS13850	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BAV_RS13855	COG0850	regulation of cytokinetic process
BAV_RS13860	COG2894	cell division
BAV_RS13865	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BAV_RS13880	COG0488	(ABC) transporter
BAV_RS13885	COG2066	Belongs to the glutaminase family
BAV_RS13890	COG0531	amino acid
BAV_RS13900	COG0076	glutamate decarboxylase activity
BAV_RS13915	COG4608	Belongs to the ABC transporter superfamily
BAV_RS13920	COG0444	Belongs to the ABC transporter superfamily
BAV_RS13925	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS13930	COG0601	transmembrane transport
BAV_RS13935	COG0747	negative chemotaxis
BAV_RS13940	COG1215	transferase activity, transferring glycosyl groups
BAV_RS13950	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAV_RS13955	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BAV_RS13965	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BAV_RS13970	COG1538	Outer membrane efflux protein
BAV_RS13975	COG0577	efflux transmembrane transporter activity
BAV_RS13975	COG1136	(ABC) transporter
BAV_RS13990	COG0405	Gamma-glutamyltransferase
BAV_RS14010	COG0579	oxidoreductase
BAV_RS14015	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAV_RS14020	COG0259	pyridoxamine-phosphate oxidase activity
BAV_RS14085	COG1368	sulfuric ester hydrolase activity
BAV_RS14145	COG2982	Protein involved in outer membrane biogenesis
BAV_RS14150	COG2818	Glycosylase
BAV_RS14155	COG0727	PFAM Uncharacterised protein family (UPF0153)
BAV_RS14165	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BAV_RS14175	COG1464	Belongs to the NlpA lipoprotein family
BAV_RS14180	COG2011	ABC-type metal ion transport system permease component
BAV_RS14185	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAV_RS14190	COG1501	Belongs to the glycosyl hydrolase 31 family
BAV_RS14195	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BAV_RS14195	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAV_RS14205	COG0318	PFAM AMP-dependent synthetase and ligase
BAV_RS14210	COG1473	amidohydrolase
BAV_RS14215	COG0583	DNA-binding transcription factor activity
BAV_RS14220	COG2855	membrane
BAV_RS14230	COG2239	Acts as a magnesium transporter
BAV_RS14245	COG1522	sequence-specific DNA binding
BAV_RS14260	COG0653	protein targeting
BAV_RS14265	COG0739	heme binding
BAV_RS14280	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
BAV_RS14295	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BAV_RS14300	COG1181	Belongs to the D-alanine--D-alanine ligase family
BAV_RS14305	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BAV_RS14310	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BAV_RS14320	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BAV_RS14325	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BAV_RS14330	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BAV_RS14340	COG3116	cell division
BAV_RS14345	COG0275	rRNA processing
BAV_RS14350	COG2001	Belongs to the MraZ family
BAV_RS14355	COG0488	(ABC) transporter
BAV_RS14360	COG0418	dihydroorotase activity
BAV_RS14365	COG1473	amidohydrolase
BAV_RS14420	COG4654	Cytochrome c, class I
BAV_RS14425	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BAV_RS14455	COG2084	Dehydrogenase
BAV_RS14460	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAV_RS14490	COG0442	prolyl-tRNA aminoacylation
BAV_RS14495	COG0824	Thioesterase
BAV_RS14500	COG0811	peptide transport
BAV_RS14505	COG0848	biopolymer transport protein
BAV_RS14515	COG0823	Involved in the tonB-independent uptake of proteins
BAV_RS14535	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BAV_RS14550	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAV_RS14555	COG0697	spore germination
BAV_RS14580	COG0463	Glycosyl transferase, family 2
BAV_RS14600	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BAV_RS14605	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAV_RS14610	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BAV_RS14615	COG0328	RNA-DNA hybrid ribonuclease activity
BAV_RS14620	COG2226	methyltransferase
BAV_RS14625	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAV_RS14630	COG0741	lytic transglycosylase activity
BAV_RS14630	COG1388	LysM domain
BAV_RS14675	COG2816	NAD+ diphosphatase activity
BAV_RS14710	COG2719	SpoVR family
BAV_RS14715	COG2718	Belongs to the UPF0229 family
BAV_RS14720	COG2766	serine protein kinase
BAV_RS14730	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAV_RS14730	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAV_RS14745	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BAV_RS14750	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BAV_RS14760	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BAV_RS14770	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BAV_RS14775	COG0316	Belongs to the HesB IscA family
BAV_RS14785	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BAV_RS14790	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BAV_RS14795	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BAV_RS14800	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BAV_RS14810	COG0312	modulator of DNA gyrase
BAV_RS14815	COG3028	Belongs to the UPF0307 family
BAV_RS14825	COG0045	succinate-CoA ligase (ADP-forming) activity
BAV_RS14825	COG0045	succinate-CoA ligase (ADP-forming) activity
BAV_RS14825	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAV_RS14825	COG1042	CoA-binding domain protein
BAV_RS14825	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAV_RS14825	COG1042	CoA-binding domain protein
BAV_RS14830	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BAV_RS14870	COG5539	protein K27-linked deubiquitination
BAV_RS14870	COG3774	pathogenesis
BAV_RS14880	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAV_RS14885	COG1696	Membrane protein involved in D-alanine export
BAV_RS14915	COG2264	protein methyltransferase activity
BAV_RS14920	COG0439	Biotin carboxylase
BAV_RS14925	COG0511	ligase activity, forming carbon-carbon bonds
BAV_RS14930	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BAV_RS14935	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAV_RS14940	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BAV_RS14945	COG3150	esterase
BAV_RS14950	COG0557	exoribonuclease II activity
BAV_RS14960	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BAV_RS14965	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAV_RS14975	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BAV_RS14990	COG0540	Belongs to the ATCase OTCase family
BAV_RS14995	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BAV_RS15000	COG1678	Uncharacterized ACR, COG1678
BAV_RS15010	COG0351	phosphomethylpyrimidine kinase
BAV_RS15015	COG0352	thiamine-phosphate diphosphorylase activity
BAV_RS15020	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BAV_RS15045	COG1960	acyl-CoA dehydrogenase activity
BAV_RS15050	COG1024	Enoyl-CoA hydratase
BAV_RS15055	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS15085	COG0410	ABC transporter
BAV_RS15135	COG3539	Fimbrial protein
BAV_RS15160	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
BAV_RS15165	COG0237	dephospho-CoA kinase activity
BAV_RS15170	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BAV_RS15180	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BAV_RS15185	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BAV_RS15195	COG0477	Major facilitator Superfamily
BAV_RS15215	COG1126	abc transporter atp-binding protein
BAV_RS15220	COG0765	amino acid transport
BAV_RS15225	COG4597	amino acid ABC transporter
BAV_RS15230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAV_RS15235	COG2884	Cell division ATP-binding protein ftsE
BAV_RS15240	COG2177	Part of the ABC transporter FtsEX involved in
BAV_RS15245	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
BAV_RS15265	COG2226	methyltransferase
BAV_RS15275	COG4206	TonB-dependent receptor
BAV_RS15280	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAV_RS15285	COG2022	thiamine diphosphate biosynthetic process
BAV_RS15290	COG0351	phosphomethylpyrimidine kinase
BAV_RS15300	COG1538	Outer membrane efflux protein
BAV_RS15305	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BAV_RS15315	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BAV_RS15325	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAV_RS15330	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BAV_RS15360	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAV_RS15385	COG2226	methyltransferase
BAV_RS15390	COG0745	RESPONSE REGULATOR receiver
BAV_RS15395	COG5002	protein histidine kinase activity
BAV_RS15405	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BAV_RS15410	COG0583	DNA-binding transcription factor activity
BAV_RS15420	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BAV_RS15425	COG1984	allophanate hydrolase subunit 2
BAV_RS15435	COG1802	Transcriptional regulator
BAV_RS15445	COG1238	metal cluster binding
BAV_RS15450	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BAV_RS15455	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BAV_RS15465	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BAV_RS15470	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BAV_RS15475	COG4988	ABC transporter
BAV_RS15480	COG4890	Cyd operon protein YbgT
BAV_RS15485	COG1294	oxidase, subunit
BAV_RS15500	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BAV_RS15510	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BAV_RS15525	COG1137	ATPase activity
BAV_RS15530	COG0443	Heat shock 70 kDa protein
BAV_RS15535	COG2169	Transcriptional regulator
BAV_RS15535	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAV_RS15540	COG3145	DNA-N1-methyladenine dioxygenase activity
BAV_RS15545	COG0583	DNA-binding transcription factor activity
BAV_RS15555	COG1473	amidohydrolase
BAV_RS15560	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BAV_RS15580	COG1120	ATPase activity
BAV_RS15585	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAV_RS15590	COG4558	Periplasmic binding protein
BAV_RS15595	COG3720	iron ion transport
BAV_RS15610	COG1595	DNA-templated transcription, initiation
BAV_RS15630	COG1607	acyl-coa hydrolase
BAV_RS15640	COG3383	formate dehydrogenase (NAD+) activity
BAV_RS15640	COG0243	molybdopterin cofactor binding
BAV_RS15645	COG0243	molybdopterin cofactor binding
BAV_RS15645	COG3383	formate dehydrogenase (NAD+) activity
BAV_RS15650	COG0437	4 iron, 4 sulfur cluster binding
BAV_RS15655	COG2864	formate dehydrogenase
BAV_RS15670	COG3276	selenocysteine insertion sequence binding
BAV_RS15685	COG0583	DNA-binding transcription factor activity
BAV_RS15695	COG0134	indole-3-glycerol-phosphate synthase activity
BAV_RS15700	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BAV_RS15710	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BAV_RS15720	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BAV_RS15725	COG1660	Displays ATPase and GTPase activities
BAV_RS15730	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BAV_RS15735	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAV_RS15740	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BAV_RS15745	COG0792	nuclease activity
BAV_RS15750	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BAV_RS15755	COG2823	Periplasmic or secreted lipoprotein
BAV_RS15770	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BAV_RS15780	COG1309	transcriptional regulator
BAV_RS15785	COG0471	metal ion transport
BAV_RS15790	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BAV_RS15795	COG0772	Belongs to the SEDS family
BAV_RS15800	COG0768	penicillin binding
BAV_RS15810	COG1792	Involved in formation and maintenance of cell shape
BAV_RS15815	COG1077	Cell shape determining protein MreB Mrl
BAV_RS15820	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BAV_RS15825	COG0154	amidase activity
BAV_RS15830	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BAV_RS15835	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BAV_RS15845	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAV_RS15850	COG2860	membrane
BAV_RS15860	COG2223	nitrite transmembrane transporter activity
BAV_RS15870	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BAV_RS15905	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAV_RS15915	COG1960	acyl-CoA dehydrogenase activity
BAV_RS15925	COG2070	2-Nitropropane dioxygenase
BAV_RS15930	COG1024	Enoyl-CoA hydratase
BAV_RS15935	COG1024	Enoyl-CoA hydratase
BAV_RS15940	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BAV_RS15950	COG0747	negative chemotaxis
BAV_RS15955	COG0601	transmembrane transport
BAV_RS15960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS15965	COG0444	Belongs to the ABC transporter superfamily
BAV_RS15970	COG4608	Belongs to the ABC transporter superfamily
BAV_RS15985	COG0210	DNA helicase
BAV_RS15990	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BAV_RS15995	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BAV_RS16005	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BAV_RS16010	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BAV_RS16015	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BAV_RS16020	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BAV_RS16025	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BAV_RS16030	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BAV_RS16040	COG0356	it plays a direct role in the translocation of protons across the membrane
BAV_RS16050	COG1024	Enoyl-CoA hydratase
BAV_RS16060	COG0492	ferredoxin-NADP+ reductase activity
BAV_RS16070	COG0037	tRNA processing
BAV_RS16080	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAV_RS16085	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BAV_RS16090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAV_RS16095	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BAV_RS16100	COG2967	ApaG domain
BAV_RS16105	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BAV_RS16110	COG0546	phosphoglycolate phosphatase activity
BAV_RS16120	COG1671	Belongs to the UPF0178 family
BAV_RS16135	COG0583	DNA-binding transcription factor activity
BAV_RS16145	COG0129	dihydroxy-acid dehydratase activity
BAV_RS16150	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAV_RS16155	COG2326	polyphosphate kinase activity
BAV_RS16160	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BAV_RS16190	COG3181	Tripartite tricarboxylate transporter family receptor
BAV_RS16195	COG0583	DNA-binding transcription factor activity
BAV_RS16200	COG1053	succinate dehydrogenase
BAV_RS16200	COG3976	FMN-binding domain protein
BAV_RS16220	COG0431	NADPH-dependent FMN reductase
BAV_RS16220	COG1053	succinate dehydrogenase
BAV_RS16220	COG3976	FMN-binding domain protein
BAV_RS16240	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BAV_RS16250	COG1053	succinate dehydrogenase
BAV_RS16285	COG1522	sequence-specific DNA binding
BAV_RS16300	COG2814	Major facilitator Superfamily
BAV_RS16305	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BAV_RS16320	COG1999	signal sequence binding
BAV_RS16325	COG0109	protoheme IX farnesyltransferase activity
BAV_RS16330	COG1612	heme a metabolic process
BAV_RS16345	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BAV_RS16350	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BAV_RS16365	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
BAV_RS16380	COG0067	glutamate synthase
BAV_RS16380	COG0069	glutamate synthase activity
BAV_RS16380	COG0070	glutamate synthase
BAV_RS16410	COG1984	allophanate hydrolase subunit 2
BAV_RS16425	COG0511	ligase activity, forming carbon-carbon bonds
BAV_RS16430	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BAV_RS16440	COG3047	cAMP biosynthetic process
BAV_RS16445	COG1127	ABC transporter
BAV_RS16450	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BAV_RS16455	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BAV_RS16460	COG2853	Lipoprotein
BAV_RS16470	COG1131	(ABC) transporter
BAV_RS16475	COG0842	Transport permease protein
BAV_RS16485	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAV_RS16490	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BAV_RS16495	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BAV_RS16500	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BAV_RS16505	COG0131	Imidazoleglycerol-phosphate dehydratase
BAV_RS16515	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BAV_RS16520	COG0107	imidazoleglycerol-phosphate synthase activity
BAV_RS16525	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BAV_RS16530	COG0140	phosphoribosyl-ATP diphosphatase activity
BAV_RS16535	COG0537	adenosine 5'-monophosphoramidase activity
BAV_RS16540	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAV_RS16545	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAV_RS16555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAV_RS16560	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAV_RS16565	COG1970	mechanosensitive ion channel activity
BAV_RS16570	COG0723	plastoquinol--plastocyanin reductase activity
BAV_RS16575	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BAV_RS16580	COG2857	Cytochrome c1
BAV_RS16585	COG0625	glutathione transferase activity
BAV_RS16590	COG2969	positive regulation of protein catabolic process
BAV_RS16615	COG1160	GTP binding
BAV_RS16625	COG0601	transmembrane transport
BAV_RS16630	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAV_RS16640	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BAV_RS16650	COG0513	Belongs to the DEAD box helicase family
BAV_RS16655	COG1280	lysine exporter protein (LysE YggA)
BAV_RS16660	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BAV_RS16680	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BAV_RS16690	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAV_RS16695	COG0154	amidase activity
BAV_RS16700	COG1609	Transcriptional regulator
BAV_RS16720	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BAV_RS16725	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BAV_RS16740	COG0018	arginyl-trna synthetase
BAV_RS16750	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BAV_RS16755	COG2200	EAL domain
BAV_RS16765	COG1280	lysine exporter protein (LysE YggA)
BAV_RS16780	COG1960	acyl-CoA dehydrogenase activity
BAV_RS16785	COG0183	Belongs to the thiolase family
BAV_RS16790	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAV_RS16805	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAV_RS16815	COG1629	transport
BAV_RS16820	COG2922	Belongs to the Smg family
BAV_RS16825	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BAV_RS16840	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAV_RS16845	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BAV_RS16850	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAV_RS16855	COG1028	Short-chain dehydrogenase reductase Sdr
BAV_RS16870	COG0028	Belongs to the TPP enzyme family
BAV_RS16875	COG1522	sequence-specific DNA binding
BAV_RS16880	COG3781	membrane
BAV_RS16905	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAV_RS16910	COG1744	ABC transporter substrate-binding protein PnrA-like
BAV_RS16915	COG3845	ABC transporter
BAV_RS16920	COG4603	Belongs to the binding-protein-dependent transport system permease family
BAV_RS16925	COG1079	Belongs to the binding-protein-dependent transport system permease family
BAV_RS16930	COG0402	S-adenosylhomocysteine deaminase activity
BAV_RS16945	COG1254	Belongs to the acylphosphatase family
BAV_RS16950	COG2010	Cytochrome c
BAV_RS16950	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BAV_RS16960	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BAV_RS16975	COG1690	Belongs to the RtcB family
BAV_RS16980	COG4650	regulator
BAV_RS16995	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BAV_RS17000	COG0230	Belongs to the bacterial ribosomal protein bL34 family
BAV_RS17005	COG0594	ribonuclease P activity
BAV_RS17010	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BAV_RS17015	COG0706	membrane insertase activity
BAV_RS17020	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BAV_RS17025	COG1473	amidohydrolase
BAV_RS17030	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BAV_RS17035	COG1505	serine-type exopeptidase activity
BAV_RS17045	COG0281	malic enzyme
BAV_RS17045	COG0280	phosphate acetyltransferase
BAV_RS17050	COG0436	Aminotransferase
BAV_RS17055	COG1278	Cold shock
BAV_RS17110	COG3706	GGDEF domain
BAV_RS17165	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BAV_RS17165	COG4797	methyltransferase