CWR61_RS00015    3394 ..    3417 +  -6.8  -2.92246   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCCGTTCC  50 16
CWR61_RS00020 NONE
CWR61_RS00025 NONE
CWR61_RS00030    6178 ..    6213 +  -8.8  -3.27525   AGCCGCTGAAGCCGG    GCGGCGTGCCGGCC-CC GCC GGCGGCCGGAGCGCGGA    TTCCGTTTCAACGCC  59 32
CWR61_RS00035    6455 ..    6476 +  -7.3  -4.09685   CTCGGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  71 116
CWR61_RS00040 NONE
CWR61_RS00045    6696 ..    6711 +  -2.6  -3.00629   CGCGTTCGATCCGCG              TC-ATGG GCA CCATCGA              ATTTCTAGGTTCTTC  41 14
         tuf    7969 ..    8003 + -23.1  -3.72893   AAGACGCGGTTTGCC     CATGGATAGAGGGGC CGGAT GCCCCTCTATCCATG     TTTGCTGGAAAAGTA 100 39
CWR61_RS00055 NONE
        secE NONE
        nusG    9099 ..    9117 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CWR61_RS00075   10343 ..   10364 + -14.5  -2.62184   ATAGAACTTTGGGCC           GCATCCGGA CTCG TCCGGATGC            TGCTGTCAAAGACCG  74 55
CWR61_RS00080   11087 ..   11100 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG TGTC CGGAA                TTCGCTGAACGACAA  42 31
CWR61_RS00085   11561 ..   11593 + -17.7  -4.35524   AGACCTCGCGTCGAC      GCCCGGGGACAGC GCTCTTA GCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 40
        rpoB NONE
        rpoC   20119 ..   20142 + -16.8  -4.45544   CGACAGCCAAAAAAA          GGCCGCTGAT GTGA ATCAGCGGCC           TTTTGCTTGATGCCG 100 82
CWR61_RS00105   22282 ..   22306 +  -4.2  -3.22298   GGAAGATCTGCAGTT          GGTCCTGG GGAGCGATG CCAGGTCC          TTCGTCCTGGATCGA  45 244
CWR61_RS00140 NONE
CWR61_RS00145 NONE
        fusA NONE
         tuf   33581 ..   33606 + -14.7  -4.62203   AGCAGTGCCCAACCA         GCGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CWR61_RS00160   33978 ..   34017 + -20.2  -3.55444   TGTGGCGCGACTCGT  GAAAAATGGCCGCATTCC CTCG GGAGTGCGGCCATTTTGC   TTTGGCGAGTAAACC 100 63
CWR61_RS00165 NONE
CWR61_RS00170 NONE
CWR61_RS00175 NONE
CWR61_RS00180 NONE
CWR61_RS00185 NONE
CWR61_RS00190 NONE
CWR61_RS00195 NONE
CWR61_RS00200 NONE
CWR61_RS00205 NONE
CWR61_RS00210   39099 ..   39121 + -17.8  -6.28967   CGTTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTTGTTTATC 100 70
CWR61_RS00225   42629 ..   42654 +  -6.7  -3.51232   ACGGGGCCGCATTAG         CGCCCTGCCTGC CCC GCCGGC-GGACG         TTGGTTTGAGCCGAC  57 26
CWR61_RS00230 NONE
CWR61_RS00235   43786 ..   43797 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAATT  43 31
CWR61_RS00240 NONE
CWR61_RS00245 NONE
CWR61_RS00250 NONE
CWR61_RS00255 NONE
CWR61_RS00260 NONE
CWR61_RS00265 NONE
CWR61_RS00270 NONE
CWR61_RS00275 NONE
        secY NONE
CWR61_RS00285 NONE
CWR61_RS00290   48880 ..   48899 +  -2.8  -3.08812   GCGTCAAGGCTAACC            CAGTTAGCG GTA CGC-AACGG            ATTTATTCAAGGAAC  43 28
CWR61_RS00295 NONE
CWR61_RS00300   49679 ..   49694 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  45 3
CWR61_RS00305   50410 ..   50439 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  84 99
CWR61_RS00310   51545 ..   51579 + -19.2   -4.2828   CGTCCGTAAGCGGTC     AAGCGCGGCGGGCGCG GCA TGCGCCCGCCGCGATG     TTTTCATGCATCGAA 100 32
CWR61_RS00315   52113 ..   52142 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCCCGCC 100 46
CWR61_RS00325 NONE
        dsbD   55087 ..   55140 +  -7.5  -3.04144   GCTCCTGACGCCGCC TCGCATC-GCC-C-CGGGCGCGCC CGGGGCGAT GGCGTGCCCGAGAGGCTGGTACGA TGTTGCCCATACCAG  54 33
CWR61_RS00335   56342 ..   56352 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGCCGC  52 207
CWR61_RS00350   58803 ..   58829 +  -6.4  -5.14563   GCCCGTTGTCTATGA         GGGGGGAAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAACGC  93 110
CWR61_RS00355 NONE
        ccsB   62297 ..   62326 + -22.3  -3.53012   CGTCGTGCCCCCAAA       GACAATGCCCCGC GGAT GCGGGGCATTGTC        TTTGGGGGCGCCGCC 100 45
        cyaY   64671 ..   64724 + -15.1  -2.80816   CGATGTCGCCGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCGCGCAGCA TATCGTCCATGACGA  70 513
CWR61_RS00385 NONE
CWR61_RS00390 NONE
CWR61_RS00395   69764 ..   69819 +   -11  -5.14563   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCTGGCGGA TTTTTTCGTCCGCGC 100 120
CWR61_RS00410   74873 ..   74891 +   -16  -3.44848   GCTTCACCCAGCATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  90 142
         ssb   75522 ..   75537 + -10.4  -5.75342   CGCTGGATGCGAAAA              CCCTGC CTCG GCAGGG               TTTTTTTTCGGCCGC 100 57
CWR61_RS00420   77854 ..   77883 + -17.1  -2.72461   TGAAATTCTAGAAAA       CGGCGGCGGGCCGC CTG GCGGCCCGCC-CGG       GTTTACCCGGCATTG  81 30
CWR61_RS00425 NONE
CWR61_RS00430 NONE
CWR61_RS00435 NONE
CWR61_RS00440   81452 ..   81510 +  -9.6  -3.28924   GCACCTGCACCGCCA CGTCGCGCGTGACGCCCAGGCGTTGCAGG GTGT CCTGCAATAC--GCGC-TCGCGCGCGCCG TTCTGGCGCGGCATG  63 297
CWR61_RS00450 NONE
CWR61_RS00455   85030 ..   85060 +  -3.2  -2.63301   GGATCTTTCCTACCA       GCAGTGTGTCTATG TAC TACATTCACACTGC       TACTCTCAGAATGTC  39 143
CWR61_RS00460 NONE
CWR61_RS00465   87081 ..   87100 + -12.1  -3.19463   GGCGCGGGGCGCGAG            GCGGCCG CAACGC CGGCCGC             TTGCTGCCTGCTCAC  71 65
CWR61_RS00470 NONE
CWR61_RS00475   89219 ..   89242 + -16.7  -3.97331   GACACGATTGTCCTG          CCGGCGGGC CAGGTC GCCCGCCGG           TTCTTTGCCTGGATT  95 44
CWR61_RS00480 NONE
CWR61_RS00485 NONE
CWR61_RS00490   92387 ..   92404 +  -9.9  -3.72576   TCATGGTTCCCTCTT             TTCGCAC GATC GTGCGAA              TTTAATCGAAAAAAA  71 255
        glcC   96356 ..   96414 +  -5.1  -3.28791   GCGCCGGGCCTTGGG TCGTGGCCGGCGCGTCCCGCGCCGG-CAG CGG CTGGCCGGCGTAG-ATGCGGCCGTAGCGG TTGTCCAGCAGGGCT  49 66
CWR61_RS00535  101192 ..  101207 +  -8.2  -2.53382   CCGCCGATTGACAAG              CCCGGC CGGC GCTGGG               TAGATTGCGCCTACT  53 30
        dapA  102457 ..  102482 +  -7.5   -2.7317   CTGGGAGGGACCGGG         GCGCCCG-TGCA TCG TGAGGCGGGCGC         TAATTCCGAATATCT  51 108
CWR61_RS00545 NONE
CWR61_RS00550  104208 ..  104225 +  -2.5  -2.89602   CGCACACATACGCTG             ATGCGGC CCTA GCCGCCC              GTTTCCTATGCCACA  40 14
CWR61_RS00555 NONE
CWR61_RS00560  107449 ..  107503 +  -6.4  -3.21099   CAGCGGCCGCAGGCG CGGCA-CGTCGTGCCCCAGCGCGC TATAGACCC GCGCGCCGGT-CAGGATGGTGCCG TTGATGGTCGACAGC  50 428
CWR61_RS00575  111197 ..  111207 +  -4.6  -4.11484   ACACATGAAGGGCCT                 TGCG TCT CGCG                 TTTTCACGGGTTCGC  64 33
CWR61_RS00580  112621 ..  112643 + -11.2  -2.90075   AGGGCAGGGCCGCGC           CGCCGTCAGG CGG CCTGGCGGCC           TCTCCTTGAAAAACC  64 44
CWR61_RS00585 NONE
CWR61_RS00590 NONE
        aspS  115640 ..  115672 +  -9.8  -3.64703   GCCAGCGGCCGGAAT     CGGGC-AGGCCGGGC AATG GCGTGGCCTCGTCCG      TTTCGATAACGCGCC  68 81
CWR61_RS00600 NONE
        clsB  117855 ..  117867 +  -6.2  -3.14132   CGCCGGCCAGGATGC                GCGG CGTCA CCGC                TTCGTCCAGGAACCA  50 115
CWR61_RS00670  133740 ..  133767 +  -6.2  -3.80625   GATGTGAAACGTCAA        TGGTGACCAGGC ACCT GGCTGGTTTCCA         TTTCCCTTCTGACAG  60 20
CWR61_RS00675 NONE
CWR61_RS00680 NONE
CWR61_RS00685  136336 ..  136346 +  -6.8  -3.54653   GTCGGGGTGCAACGC                 CGCT TGC AGCG                 TTGTGTACTCCGGAT  57 55
        waaC  150504 ..  150530 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ATA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CWR61_RS00755  152085 ..  152123 +  -5.9  -3.14344   GGGCCGCGGCGTGGC  GCCGAA-GGCGGC-GCCGG TGG CCGCCAGCAGGCGTTCGGC  TTCCTGCCGCACCTC  50 306
CWR61_RS00775 NONE
CWR61_RS00780 NONE
CWR61_RS00785 NONE
CWR61_RS00790 NONE
CWR61_RS00795  157934 ..  157944 +  -8.2  -3.20991   ATTGCGCTGGGTTGA                 CGCG GTT CGCG                 TTGCATTGCGTTGCA  59 26
CWR61_RS00800 NONE
CWR61_RS00805  160279 ..  160304 + -13.2  -3.63895   CTCTAGCGGCCGGCA         GGCGGGCGGC CTTGGC GCCGCCCGCG          TTTCGCGTCCTTCAC  81 35
CWR61_RS00810 NONE
        lipB  161314 ..  161336 + -10.5  -3.31792   CTTTTTTGTCTCGAA           CCGGACCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  67 49
        lipA  162389 ..  162409 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
CWR61_RS00850  167419 ..  167441 +  -9.1  -2.70932   CCGTGTACAGGCGCC           GTGCGCCGA TGTTC TCGGTGCGC           TCGTTGACCGAGAAG  52 223
CWR61_RS00880 NONE
CWR61_RS00885 NONE
CWR61_RS00890  174703 ..  174759 +  -7.8  -2.91264   AACTCGCCGCCGCCT TGCGGCCCTG-AC-GGCGCTGGGCGCGC TGT GGGCGGCCGGCGCCGGTGCGCATCCGCA TATGTGGATCGACGC  52 15
CWR61_RS00895 NONE
CWR61_RS00900  176429 ..  176454 +  -6.1  -3.17075   GATTCGAACGGCATC         CGTTGAGCGCCG CCC TGGCGCT-GGCG         TTGGCTTGGCAAGGC  49 153
CWR61_RS00935  184393 ..  184417 + -21.5  -2.70932   TCACCCGGTGTCGCA          GAACGCCCCGC CTG GCGGGGCGTTC          TGCTTGGCCGCGCCG 100 46
CWR61_RS00940  184735 ..  184748 +  -4.5  -3.08371   CCGCAACAACTGAGC               GG-CGC ACG GCGGCC               TGTCTTGGCCATGTC  45 28
CWR61_RS00945  186001 ..  186025 +  -4.9  -2.93393   CGCGCCGCGCATCGC         GCG-GCGCCG CAGCAA CGGCGCTCAC          CTTTGTCGCATGAAG  46 174
CWR61_RS00950 NONE
CWR61_RS00955 NONE
        metF  188987 ..  189019 + -16.3  -3.64703   GGGTGAACGCCGGGT      CTTTCAGCGCGGCGC GCA GCGCGGCGTTGAAGG      TTTCGATGGCCGCCG  85 214
CWR61_RS00990 NONE
CWR61_RS00995  197854 ..  197884 +  -8.2  -2.66316   CCAGCCAGCGCGGCA       TCGGCCATGGCGGT GAA ATCGACGTGGCTGG       TGATGTCCTGCAGGC  51 296
CWR61_RS01030  204557 ..  204582 +  -4.7  -3.53012   CAGCCGGACCTTCTG         CCGCCATTGGCC CAG GGT-AATGCCGG         TTTCGCCGCGAAAGC  52 193
CWR61_RS01040 NONE
CWR61_RS01045  206621 ..  206643 +  -4.7  -3.53224   GCCAGCGCCACCCCG           GCCAGCGTG GCGTG CACGCCGGA           TTTCAGGACGAAATA  52 522
CWR61_RS01055 NONE
CWR61_RS01060  209321 ..  209371 + -10.2  -3.05384   GGTCATTTCGGCGAT GTGGGCGTTCCAGACCACGCGGGT GAA GCCCGGGTAGTCGGGGTCGTCGAC TTCGATCACGCGCAG  59 362
CWR61_RS01085 NONE
CWR61_RS01090 NONE
CWR61_RS01095  213611 ..  213648 +  -9.8  -3.39895   CGCTGCATGCGGCGC  TGCAGCGCC--GCGGCGG CTAG CCGCCGCACGGCGCCTCA   TTCATTCGTACGAGC  64 6
CWR61_RS01135 NONE
CWR61_RS01145 NONE
CWR61_RS01150  225262 ..  225303 +   -13  -3.33696   CATGAAGCACTGATG CGGCAAG-GGG-CGGCGGCT CGCA AGCCGCCGTCCCGCGTACCG TTCATTCCAGGCGGA  77 28
CWR61_RS01165  228735 ..  228759 +  -9.1  -2.90075   CGCCGGTATCGATTT          CGCTGGCGGCC TGA GGCCGCGGGCA          TATGGTTCGAACGCC  58 12
CWR61_RS01170  230317 ..  230331 +  -2.7  -3.72576   AGGCCTGTCCGGACA               GCGGC AACGG GCCGA               TTTCCTGCAGCAAGG  53 464
        kynU  234646 ..  234660 +  -4.2  -3.53224   CGCCGTGACCTGAGG               CCGG CATATCC CCGG               TTTAGGAGAAACCTA  51 28
CWR61_RS01200  235241 ..  235271 + -15.3  -3.25823   GAAGGCCGAGCGCGA       GGCCGAGCGCGCC TAGGC GGCGCGCCCGCCC       TTGATGTCCGCGGCG  83 10
CWR61_RS01205  236528 ..  236542 +    -7   -2.7035   CGAAGCGCGCCAGCA               GCGCCG GTT CGACGC               TGATCTCTGCCTGGC  49 293
CWR61_RS01230  239538 ..  239565 + -21.4  -3.05997   GTGCCGTGTTGATTC        GGTGCCTGTCCC GACA GGGACAGGCACC         TGTGCTTTATCAGGC 100 57
CWR61_RS01245  242820 ..  242848 +  -7.4  -3.61715   AGCCGGGGCGGCCGC       GCG-CATGCGCGG CCCT CTGCGCATGACAC        TTCTTCAACGCAGTA  63 39
CWR61_RS01250  243885 ..  243935 + -14.5  -3.65224   GAGCGATGGACACGA CGGCGGCGCCGGACCGATGGCGGC CGGC GCCGCCGCCGGCCAGGCGG-GCTG TTGTTAGAATCCCCT  87 39
CWR61_RS01255  244699 ..  244713 +  -7.8  -3.75153   GTGCGCGCCGCAGGC               GTCGGC GGG GTCGAC               TTTCAGTTCGCCGCC  64 94
CWR61_RS01265  246489 ..  246529 +  -5.4  -3.01712   AAGCGCAAAATTTTT CAG-GAT-CGGGCCGCGC CAGCTCC GCGCGGCCCGCGTTGCCG TGTTCCACCAGCGCG  46 93
CWR61_RS01270  247803 ..  247816 +  -3.7  -3.73775   ACCATGTCCTTGACG               CCGGC GCGC GCCAG                TTTCCTGGGGATGGG  55 371
        rsmB NONE
CWR61_RS01300 NONE
CWR61_RS01305 NONE
CWR61_RS01310 NONE
        trkA NONE
CWR61_RS01320  260177 ..  260203 + -11.4  -2.70232   TTCTGGCGCAAATAG         CGGCGCGCGCGG CCG CTGCCCGCGCGG         TGGTGTACTATTCAG  62 26
CWR61_RS01325  260908 ..  260959 +    -5  -3.13403   CACGGCGATCTCTGC CGGCGTACGGCTGGCGATGGGCAG CCCGAC CGGCCCG-CGC-AGCCGGGCGATG TCTTCGTCGCCCAGG  47 144
CWR61_RS01335  262601 ..  262626 +  -7.7  -2.64616   TTCTTTTAATTGTCA         GTATGCTGATT ATAA AATCAGTGTAC          TGATATAAGTGCCGC  50 101
CWR61_RS01340 NONE
CWR61_RS01345 NONE
CWR61_RS01350 NONE
CWR61_RS01355 NONE
CWR61_RS01360  267614 ..  267625 +  -7.2  -3.68351   TGGACGCGGCGATCT                CGCC GTCC GGCG                 TTTCGCTGGTGACGC  64 521
CWR61_RS01385 NONE
CWR61_RS01390 NONE
CWR61_RS01395 NONE
CWR61_RS01400 NONE
CWR61_RS01405 NONE
CWR61_RS01410 NONE
CWR61_RS01415 NONE
CWR61_RS01420 NONE
CWR61_RS01425  281876 ..  281894 + -17.4  -3.66999   CCCCTGATCCCCCAA             GGGCCGCG CTA CGCGGCCC             TTTGCGTGCCTCGCT  93 105
CWR61_RS01430  283486 ..  283500 + -11.4  -3.09635   CGGCGCCCGCCAGGC               GTGGCC GTA GGCCAC               TTCGATGCTCAGGCT  62 125
CWR61_RS01440 NONE
CWR61_RS01445  285701 ..  285743 + -11.2  -3.01712   GTATCTGAGGGGGGC GGCCGTGCCCGCGGCAGGC AGCGGG GTCTGGCGCGTGC-CGGTC TCTTGCGGGGACGGG  65 33
CWR61_RS01475 NONE
CWR61_RS01480 NONE
CWR61_RS01485 NONE
        moeB NONE
CWR61_RS01495 NONE
CWR61_RS01500  296343 ..  296365 +    -4  -4.18018   CCACCGCCTTTTCCT           GCATGCCCTG CTG CAGCGCGTCC           TTTTCGCTGACGCCC  63 160
CWR61_RS01510  299127 ..  299146 + -11.4  -4.72272   GGCCGGCGCAACCGG            GGCAGCCT CGCG GGGCTGCC             TTTTTCATGGGCGGG 100 64
CWR61_RS01515  300485 ..  300500 + -11.8  -3.19668   GGCCTCCGATGTCAT              GGCGCG CGGG CGCGCC               TTGCGTTCGATGCTC  64 353
CWR61_RS01535  304309 ..  304328 +  -5.6  -2.94218   GGGCTGATCTGGCGC            GTGGGGGC CGCA GCCCGTAC             TGTCTGGTCAAGGCT  48 34
CWR61_RS01560  309217 ..  309237 +  -8.2  -3.12999   GCCGGGTATGAGTGT            GCGAGCCG CCGGC CGGCTCCC            TTACCTGTCGGATAC  57 101
CWR61_RS01565 NONE
CWR61_RS01570  310426 ..  310451 + -13.3  -5.15969   GGGCATATAGCAAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCACG 100 108
CWR61_RS01580 NONE
CWR61_RS01585 NONE
CWR61_RS01590 NONE
CWR61_RS01595 NONE
CWR61_RS01600  319965 ..  320012 + -11.3  -3.21099   GCGGCGACGATCAGT GACATGGCAATCTCCTTGCGC CCGCGT GCGCGGGCAGATTGACATGCC TTGATCGTAGCGCCG  68 422
CWR61_RS01625  324566 ..  324598 + -17.7  -2.78384   AGTCGCTCTGCACGT      CGATGTTGGCCGCCC GCA GGGCGGTCAGCAGCG      TCTGGTCGGCCGGCA  78 212
CWR61_RS01640  328720 ..  328767 +  -2.5  -4.19276   GGGCTACACCGGCCA GTAGGCCGCG--GGCGCCGCCGC CATC GCGGCGTCATCAACCCGGCCTGA TTATTTATCTATACT  58 22
CWR61_RS01645  329905 ..  329951 +  -8.7  -3.80573   GCTCAGCCTGCGCTG GCT-GTTCGGCGCCTGAAGGGCG GCG CGGCCT-CAGGCGCCCGACGAGG TTTCGTCGTCGTCGA  67 10
CWR61_RS01705 NONE
CWR61_RS01710  344665 ..  344681 +  -5.7  -3.17075   GCATGCGCACGCGCA              GCCAGGT CGT GCCGGGC              TTGCATTCGAGCGCC  50 409
CWR61_RS01745  351631 ..  351653 + -17.7  -3.51924   GTGTGACGCCGGGGG           CGGGCGCGC AGGGC GCGCGCCCG           TTGTCTCAGTGGCAG  93 35
CWR61_RS01765 NONE
CWR61_RS01770 NONE
CWR61_RS01775 NONE
CWR61_RS01780 NONE
CWR61_RS01785 NONE
CWR61_RS01790 NONE
CWR61_RS01795 NONE
CWR61_RS01800 NONE
CWR61_RS01805  361803 ..  361817 +  -7.1  -3.21912   AGCGTACGGGAGGCG               GCGGA CCTGT TCCGC               TTCCTGGCTTCGCCG  54 105
CWR61_RS01815 NONE
CWR61_RS01820  364211 ..  364237 + -10.1  -3.03771   GACCATCTGCGGTCC         CAGCTCTGCGC GTCCA GCCCGGAGCTG         TATTCGACAATATCC  62 323
CWR61_RS01825 NONE
CWR61_RS01830  366271 ..  366286 + -10.4  -3.15579   GGAGGGCGCGATGAA              CGGCTG CCCG CAGCCG               TTCATCGCGCCTTGC  63 50
CWR61_RS01850  369219 ..  369260 +  -6.5  -3.72576   CAAGTATCAAAAGGC TGCTGGATGACGGCCGTGCC ATT GGCATGGCTGGT-TTCGGCG TTTGATGGCAAGGCG  62 16
CWR61_RS01855  369968 ..  369978 +  -8.2  -3.48924   CGAGTCCGTGCACGC                 GCGG CGC CCGC                 TTGTGTGAAAAATGC  62 247
CWR61_RS01865  371480 ..  371506 + -11.5  -3.61591   ACCCCGCCCTTCGCG         GCGGGCGTTCG TGCGC CGGGCGTCCGC         TTGTGTCCATTTTTC  74 54
CWR61_RS01870  372605 ..  372636 +  -3.6  -3.14344   GCAGCTGGCGGCGCT      GGGCAACGATCTGTG ACG CACGGG-CGATGACC      TTGCTCAAGGACCTG  43 10
        prmC NONE
        grxD  373789 ..  373808 +  -4.9  -3.14344   GCAGCTGCTCGATGA            CTCCGGC GCGACG GCCTGAG             TTGATGCGGCGGCTG  47 7
CWR61_RS01885  374402 ..  374421 + -11.4  -3.37344   CCCGCCTGTACCGAA            GCCTGTCC CGTG GGGCAGGC             TTGCTTGCGTCCGGG  70 55
CWR61_RS01890 NONE
CWR61_RS01895 NONE
CWR61_RS01900 NONE
CWR61_RS01905 NONE
CWR61_RS01910 NONE
CWR61_RS01915  381519 ..  381551 +  -6.3  -3.68529   ATGGGTTGTGGGCGA     TGG-CGGCGTGCAGC AGATG GC-GCGCGCTGTCCA     TTTCGGTCATCGGGT  61 400
CWR61_RS01925  383311 ..  383341 + -26.9  -2.78384   GGTAAGCACACTGGG       CGGCGCCGCCGCG TCGTC CGCGGCGGCGCCG       TCTCATGCCGCGGCC 100 36
CWR61_RS01965  391555 ..  391595 + -12.4  -3.81488   GCTGAGCGCGGGTGC CGCAGTGGCCGGCGCGCGC CCAC GCGCGCGCC-GCTTCAGGG  TTGTCTTTCGAGGAA  80 36
CWR61_RS01970  393040 ..  393069 + -17.9  -3.01712   TGGCCTGACGCACGC       GGATGCGGCGCGCC TCA GGC-CGCCGCGTCC       TCTTCCAGCCAGGGG  88 33
CWR61_RS01985  394752 ..  394795 + -16.6  -3.17797   AAAAGCTGAAGCATC ATCCCCGCGTGCCTGTCCCC GCAC GGGGACTGGCACGCGCCGAC TTGGGTGTCTGTCCC  89 32
CWR61_RS02020  400068 ..  400084 +  -6.5  -3.14564   CCAAGGTGCGCGTCA              GGCCG ATCAGCC CGGCC              TTGGTCGCCGAGTAG  50 351
CWR61_RS02045  406838 ..  406862 + -17.1  -3.22388   GGCATCATCGCCGGC          GCGGCGCTGCG CGG CGCGGTGCCGC          TTGATCAGTTCAATC  85 344
        queC  410877 ..  410888 +  -5.8  -3.02144   ACAGCGGCAGCGCCG                CGCT GGTC AGCG                 TGTTGAGCAGCATGG  48 412
CWR61_RS02095  417820 ..  417840 +  -6.7  -3.39908   CGCCGCGCGAGGATG            GCCGCGCTC TAT GATGGCGGC            TGTGTTTTCACGGCA  55 12
CWR61_RS02100  419007 ..  419033 + -12.3  -2.58544   CTGCACCGCCAGCTC        GGCCGCGGCCAC GGCG GTG-CCGCGGTC         ATTGTGCGGATGGAC  62 268
CWR61_RS02110  420674 ..  420693 +  -8.5  -3.33814   GAGGCGCGGGCAGGG            CGCCGGG CCCGGA TCCGGCG             TATTATCTAGCGTTT  60 39
CWR61_RS02115  422610 ..  422668 +  -8.2  -2.80816   CTGACCGCCACCAGG CTTGCGTGACGGACGCGGTTTCCCGCCCC CACG GGGGCAGGAAAC-GCGTCAG--GCGAAGG TCTGCTCCATCAGCC  55 37
CWR61_RS02150  432637 ..  432647 +  -4.6  -2.72344   TAGCGGGCGCGGGGC                 CGGG GAG CCTG                 TCCTTGGCCGTCAAC  44 38
CWR61_RS02155 NONE
CWR61_RS02160  434872 ..  434903 +  -4.4  -3.72576   CGCGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  56 92
CWR61_RS02165  436435 ..  436450 + -10.4  -2.78384   TACACCATGCCATTG              GCCACG CAGG CGTGGC               TGTAGTGGCCGCCCG  56 343
CWR61_RS02175  437564 ..  437579 +  -8.2   -3.6761   CCTGATCCTGGTGGG              GGCCGC TGTG GTGGCC               TATTTGTTGGCGCGC  65 198
CWR61_RS02180  438541 ..  438565 +   -15   -5.1675   CCGCCCATGAAAAAA         CCCCGCC-GGC GCTG GCCTGGCGGGG          TTTTTTCATGGATGG 100 52
CWR61_RS02200 NONE
CWR61_RS02205  442125 ..  442173 +  -5.2  -2.70532   CATCATTTTTCTTCT TACGGGCTCCGCGGCCAACATTG GTTG CAAGGCTGCGCGCGGA-CTCGTG TCAATTTCTGGCAAT  44 62
CWR61_RS02210  447572 ..  447589 +  -6.9  -3.14931   ATTCCCGATCTTCCC             GGGGCGT GGGC ACGCCGC              TTGCTGGGGCGTGGG  51 83
CWR61_RS02215 NONE
CWR61_RS02220  448243 ..  448275 +  -9.7  -3.22448   CCGCGTCAGATCGCC      GCGGCCGTACCGC CCAAATC GCTGCGCGGCCGC      TTCATCCCTCTTGCT  62 344
CWR61_RS02225  455326 ..  455367 + -11.6  -3.86015   CGCGTATGCCGCGGA CGCG-GGGCTCGCGTCGAA CCTGT TTCGATGCCAGCCCCCGCA TTTGTCCGGCCCGTG  79 87
CWR61_RS02230  456270 ..  456285 + -11.8  -5.83822   GCCCACGTTTCGAGG              CGGCCC ATCC GGGCCG               TTTTTTTTGGATGTA 100 320
CWR61_RS02235 NONE
CWR61_RS02240 NONE
CWR61_RS02245 NONE
CWR61_RS02250 NONE
CWR61_RS02255 NONE
CWR61_RS02260  461992 ..  462019 +  -2.8  -3.14132   CGTCCATGGCGCGCC       CGCCGTCCGAGT GCGTAA ACT-GGA-GGCG        TTCCTGGACGAGGCG  43 51
CWR61_RS02265  463137 ..  463160 + -10.2  -3.54424   GCCAGCTCGCCCGAT          GGC-GCGCCGG CGA CCCGCGCAGCC          TTTGGCGAGATCGCG  69 73
CWR61_RS02270  464566 ..  464597 +  -5.1  -4.12532   TCAGGTCGCGCACCA      GCTG-CGCCAGC CTGGCGGCC GCGGGCGTCAGC      TTTCTATGTCGCAAC  66 77
CWR61_RS02280 NONE
CWR61_RS02285 NONE
CWR61_RS02290  468390 ..  468429 +   -12  -2.52896   AGGCTGGCGGACCGG  CGCGGCGGCGGTGCGTCCG TCA CGGGCGCAC-GCCGCGCCA  TCAGTTCCACGATCC  62 73
CWR61_RS02300  469978 ..  470023 + -16.2  -3.05384   CTCATTCTTGCGTAA TGCGTGACGCGCTACTATTC GCCCAA GTTAAGTAGCGCGTCACGCA TTACATGGGCAGGGG  82 140
CWR61_RS02305 NONE
CWR61_RS02310 NONE
        pruA  476559 ..  476591 +  -4.8  -4.65916   GAAAACCACCGGTTG     TCCA-GC-GCGGCGCG TCA CGCGCTACAGCATGGG     TTTTGTTAAAGTGAG  77 39
CWR61_RS02320  477297 ..  477332 +  -9.6  -3.34344   GCGCTTTGAGCGGCA    GCCGGGGCG-TGGCGGG TGC CTCGTCAGCGCGCCAGC    TTCATTGAAACGTCG  64 32
CWR61_RS02340  479512 ..  479536 +   -15  -4.30987   CGCGTCGCCCTCCAA         GGCCGC-CCGG CATG CCGGCGCGGCC          TTTGTTCTGCGCGCT 100 87
CWR61_RS02345  480936 ..  480957 +  -6.5  -3.28712   GCCGCTGACCAGGTC           GGGCATGAGC GCG GCGC-TGCCC           TTGTAGGGCACCGGC  52 449
CWR61_RS02395  491914 ..  491927 +  -2.3  -4.07568   TTCGGCCAGATGCGG               ACGCT CGTA AGCGG                TTTTCCAAAGCGGCC  58 281
CWR61_RS02405  494102 ..  494114 +  -5.5  -3.30441   ATCATGCACCCGGCG                TCGGA GCG TCCGG                TTCTCGCGGATAGTG  53 65
CWR61_RS02410  496275 ..  496292 +  -7.7  -3.33261   ACGTTGGACCGACTA             TGCGATC AGCT GATCGCG              TTCTAGCAGTTGCAG  58 2
CWR61_RS02415 NONE
CWR61_RS02420  498463 ..  498476 +  -2.4  -3.29829   ATGTCACTGGGTTCA               GTGA AGTTGC TCAC                TTCTACAACGGTGTA  45 506
        htpG  502470 ..  502511 +  -6.3  -2.53876   GGGACAGGCACACAT C-GCCGCGGATGCCAGCCCC TTC GGGACAGGCACACGCAGCCG TCAGTTCCCATCCGG  45 137
CWR61_RS02465  507009 ..  507023 + -11.4  -2.91274   TATCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 128
CWR61_RS02495 NONE
CWR61_RS02500 NONE
CWR61_RS02505 NONE
CWR61_RS02510  514890 ..  514929 + -13.5  -2.78715   ACTGAGGCTGCGTGA CCGCCC-GC-CCGCCGCGC GTGC GCGCGGCGCCGCTGGGCGC  TATAATGCGCAGCTT  69 36
CWR61_RS02515  515454 ..  515464 +  -4.6  -3.20227   CGTCGCTTTCATAAG                 CGCG CTT CGTG                 TCTTCATCATTGACC  47 428
CWR61_RS02530 NONE
CWR61_RS02535  518478 ..  518508 +  -5.3  -3.65046   GCCCAGCCCTATGCC       GGCCACGACCAGC TGGAT GCTGGTGGTGGGG       TTGTTGGCCTCGACC  54 344
CWR61_RS02545 NONE
CWR61_RS02550  522445 ..  522488 + -12.4  -4.20918   GGGATGCGTCGCGGT G-GACGGGCGCGCTCTGTC GGGTTGA GACGGACCGCGCCCGACGC TTTATTCAAGTTCGA  95 1
CWR61_RS02555  523266 ..  523293 +  -3.9  -2.78996   GCGGCGGCGGTTCGC        GGGACGGCGCG CGCAGA CGGGCCTGCCC         ATTTCGATCAGGATG  43 41
CWR61_RS02560  524750 ..  524764 +  -2.8  -4.21984   GCCGCAATCTGGCCG               CACG CTGTTTC CGTG               GTTTTTTATTTTTTT  64 469
CWR61_RS02565 NONE
CWR61_RS02570 NONE
CWR61_RS02575  528104 ..  528114 +  -5.4  -2.93447   GTACAAGGGATGAGC                 CTCT GGT AGAG                 CTTTCTCCACCTTGG  46 28
CWR61_RS02580  529324 ..  529352 +  -8.9  -3.81755   GAAACCGGTGCCCAC        ACAGGGTGTTCAT ATC GTGAACATCCTGC        TTCTGTTTCACGCGT  69 317
CWR61_RS02585 NONE
CWR61_RS02590 NONE
CWR61_RS02595 NONE
CWR61_RS02600  533677 ..  533687 +  -8.2  -3.29144   GGTCGGTGACGGCGG                 GGGC CGA GCCC                 TTGTAGGGCACGTGC  59 454
CWR61_RS02625  538771 ..  538782 +  -2.2  -2.50816   GTATCTTGTCCTCCA                G-GCC GGT GGCGC                CTTGCTCCATCCGGC  37 118
CWR61_RS02630  539574 ..  539595 +  -8.6  -3.28712   GACCAGCGCCGCGGT           CGCGCCCC GGGCCA GGGCCGCG            TTGTAGGCCAGCACC  59 415
CWR61_RS02675  547820 ..  547832 +  -2.6  -3.62597   GCCCGAGCAGTGGCT                GGCG ATCAG CGTC                TTGTTCCGCAGTCCG  50 369
CWR61_RS02720  556339 ..  556369 +  -8.9  -3.10164   AGGGCGCCACGGCGC      GCCGCA-CCCGCCG CACG CGGCGGGCTCCGAC       TTCCCTGCTCAGTGA  57 318
CWR61_RS02725 NONE
CWR61_RS02730 NONE
CWR61_RS02735 NONE
CWR61_RS02740 NONE
CWR61_RS02745 NONE
CWR61_RS02750 NONE
CWR61_RS02755 NONE
CWR61_RS02760 NONE
CWR61_RS02765  564545 ..  564559 +  -8.5  -3.55444   ATGCCGCCATGATGT               CGCGC CCGGC GCGCG               TTTCCAGGGTACGGA  62 52
CWR61_RS02770 NONE
CWR61_RS02775 NONE
CWR61_RS02780 NONE
CWR61_RS02785 NONE
CWR61_RS02790  569137 ..  569151 +  -9.2  -3.12351   GGCCGCGAGGTGGCC               CTCGCG GAT CGCGGG               TTGGATGTCGCGCGC  56 70
CWR61_RS02805 NONE
CWR61_RS02810  574375 ..  574387 +  -4.7  -3.59979   ACGAGGCCCTGGCCC                GCTGC GGC GCCGC                TTTCGCATGAGCGGC  55 3
CWR61_RS02815  576395 ..  576438 + -14.5  -3.28712   GCAGGTCGAGGCCGT CCTGGATGCCCAGCGCGAC CGAGAC GTCGAGCTGGTCGGCCAGG TTCTGCAGCAGCGGC  79 489
CWR61_RS02840 NONE
CWR61_RS02845  581047 ..  581057 +  -6.8  -4.20531   CTTTCCGGACAAGCG                 CCAG CAC CTGG                 TTTTCCATCAATATG  72 89
CWR61_RS02850 NONE
CWR61_RS02855 NONE
CWR61_RS02860 NONE
CWR61_RS02865  586777 ..  586810 +  -2.9  -4.25104   GGCGCGCGTGCGCGT     CAGCCGGGCCGATGGC GGG GCCA-CGACCCAGAGG     TTTTCCTCCAGCAGG  65 454
CWR61_RS02875 NONE
CWR61_RS02880 NONE
CWR61_RS02885  590321 ..  590346 + -19.7  -5.75342   GCGACGGTCGCAATC         GCCGGTCGCGC GGAT GCGCGGCCGGC          TTTTTTTTGAGCGAG 100 44
CWR61_RS02890  591376 ..  591410 +  -5.7   -3.1505   GTTCTGACCAGCTTG    CGCAGCCAGATATGGC TGGC GTCATG-CTGGTAGCG     TTCATGCCAGATCAT  50 186
CWR61_RS02900  594029 ..  594046 +  -3.4  -3.53012   GCGACAAGTCCGCCC             CATCGG AGACAA CTGATG              TTTACACGCCGCCAC  49 236
CWR61_RS02905  595029 ..  595054 +  -2.4  -3.72576   GACGCCGGCGGCGCG         TCCGGTGCGC CCGATC GCGAGACGGA          TTTCATAAAAAAGGA  53 39
CWR61_RS02910  596065 ..  596099 +  -9.8  -2.52464   GGCATCCAGGTGCAA     TAGGCGGTGCGGCGCG TGG CGCGCCGCGCTTGCAA     TGGCTTGCGGCCGGC  55 23
CWR61_RS02915  596923 ..  596933 +  -4.6  -3.14564   CGCACAGCGCCATCA                 GGTC GGC GGCC                 TTCATCGCCGGATCC  47 119
CWR61_RS02930  600217 ..  600240 + -15.2  -5.00616   CTGGCCGATCGCGGA          CGCCGCCCTG CCTG CCGGGCGGCG           TTTTTTCCACGAGGC 100 54
CWR61_RS02980  610086 ..  610111 +  -7.4  -4.14243   GCAGATCGCCAGCCA         GCGGCGCGGC GGCTGA GGCGCGCGGC          TTTTCGGGTAACCTG  71 10
CWR61_RS02985  610816 ..  610827 +  -7.2  -3.28791   GAGCGCCTGCGTGCG                CGGC TGGG GCCG                 TTCTGAGGCCGGCGT  54 8
CWR61_RS02990 NONE
CWR61_RS02995  612863 ..  612884 +  -7.2  -3.15366   GCCACCGACGCGGAG           GGCTGGGC CTCCAT GCCCAGGC            TGTTGAGCTTTTCGC  53 164
CWR61_RS03015  617201 ..  617228 +    -9  -2.73994   TCCTCGGTGACCCGG        TCGGCCTCGCGC TTGA GCGCGGCGGCGA         TGGTCTTGCGGCGAT  53 69
CWR61_RS03025 NONE
CWR61_RS03030 NONE
CWR61_RS03035 NONE
CWR61_RS03040  622393 ..  622415 +  -8.3  -2.62184   AGGCGGCAGTAGCAT           GGCCCGGCG CAAGC TGCCGGGCA           TCGTATAACAACGAC  53 29
CWR61_RS03045  623437 ..  623476 + -19.3  -2.70932   CGCGCATCGACTAGC CG-GC-GGCCGGGCCGCCC GTCC GGGCGGCCCGGCCTGCGCA  TGCTTCAACGCCGGC  90 27
CWR61_RS03075 NONE
CWR61_RS03080 NONE
CWR61_RS03085  632400 ..  632430 +  -5.3  -3.66018   AAAAGCCGACTTTCT      GA-GCGCGGCGGCG GTGT CGGTGGCGCGCGTC       TTGTTGCGCTCCTGG  55 24
        gstA  636970 ..  636995 +  -5.3  -3.36823   CGAGGAAGGCGAGCG         C-CAGCGCGCGG CCG CCGCGCAATGAG         TTCACTTTTCAAACC  51 1
CWR61_RS03115  638037 ..  638078 +  -9.3  -3.61178   GCGCGGCCCGTGGCC GTGCGC-TCAGCCGCCCAGG CCG TCGGGCCGGCTGGCGAGCAC TTTGCGGTAGATGGC  68 65
CWR61_RS03130 NONE
        metC NONE
CWR61_RS03140  643202 ..  643216 +  -8.5  -3.55444   GGCCTGCTTTTTCCA               GCCGC CCAGC GCGGC               TTTCGGCGCTGCGCG  62 55
CWR61_RS03145 NONE
CWR61_RS03150 NONE
CWR61_RS03155 NONE
CWR61_RS03160 NONE
CWR61_RS03165  647977 ..  648011 +  -5.6  -3.28712   CGCTATCCGGACACT    GAGCAT-CGGCGCGC GGCATG GCGCGCCGCGGGATC     TTATGGGAAAGACAC  51 95
CWR61_RS03170  649103 ..  649113 +  -5.4  -3.40867   TGTGATTCATATAAA                 TTGC AAT GCAA                 TTCATTGATAGGTGG  51 371
        dapA NONE
CWR61_RS03180  651241 ..  651264 +  -3.1  -2.74144   ACCGGCCTGCTGGAA          GCGGCGGC GCATTGCTA GCCGC-GC          ATTTCAACGTGCAGC  40 8
CWR61_RS03185 NONE
CWR61_RS03190 NONE
CWR61_RS03195 NONE
CWR61_RS03200 NONE
CWR61_RS03205  655726 ..  655736 +  -3.2  -4.57569   ACGCTGATGGGCGCC                 GTTG TCC CGAC                 TTTTTCCGGAGATCC  69 34
CWR61_RS03210  657028 ..  657046 + -11.6  -3.05384   GCTGAGGCGCGCCCG             GCCGCCGC TAC GCGACGGC             TTCGATCCAGCGCGC  66 36
CWR61_RS03245 NONE
CWR61_RS03250  664462 ..  664483 +  -9.5  -4.19953   TTTCGAGGCGAAGCC           CAGCA-CGTC CGA GACGCTGCTG           TTTTGCAGTTCGCTG  78 190
CWR61_RS03260 NONE
CWR61_RS03265 NONE
CWR61_RS03270  667682 ..  667694 +  -3.3  -4.00042   CCCGCCCTGGCGACC                TGGCT GCC GGCCG                TTCTTTACTGAGCGC  58 2
CWR61_RS03275  668878 ..  668916 +  -4.4  -3.28712   GAGCCTGAGCGGCCG   GGCCTAGAATGGCAGGCT GGC AGACAGCGATTCGAGGGC   TTATGGCAGACCGCG  47 33
CWR61_RS03280  670643 ..  670687 + -12.8  -3.61398   GGTGACGGTAGCGCT GGCGGCATCGCCCGGGACGG CGTTC TTGTTCAGGGTGATGCCGGC TTCTTCCAGCGCCCG  74 241
CWR61_RS03295 NONE
CWR61_RS03300  676032 ..  676053 + -18.7  -3.14132   AGCGCGGCCGGCAAA           GGCGGCGCC GGCC GGCGCCGCC            TTCCTGGCGCGGCGC  89 40
CWR61_RS03305  677090 ..  677103 +  -6.7  -3.31144   CGTCGCGCAGCACCG               GGATG TGGG CATCC                TTGTAGCGATGCACC  52 72
CWR61_RS03315 NONE
CWR61_RS03320 NONE
CWR61_RS03325 NONE
CWR61_RS03330 NONE
CWR61_RS03335 NONE
CWR61_RS03340 NONE
CWR61_RS03345 NONE
CWR61_RS03350 NONE
CWR61_RS03355 NONE
CWR61_RS03360 NONE
CWR61_RS03365  688314 ..  688327 +  -9.5  -3.14211   ACGCGCGGGCCCAGC               GCCGC CACG GCGGC                TTCGTCCAGGCGCGT  60 117
CWR61_RS03375 NONE
CWR61_RS03380 NONE
CWR61_RS03385 NONE
CWR61_RS03390 NONE
CWR61_RS03395 NONE
CWR61_RS03400  694170 ..  694195 +  -3.1  -2.75819   ACTGCGAGGAGGTGG         CGGGCC-TGGCC TGA GGCGGCGGCGCG         ATTTCCGGATATATA  40 12
CWR61_RS03405 NONE
CWR61_RS03410 NONE
CWR61_RS03415 NONE
CWR61_RS03420  698419 ..  698429 +  -2.4  -3.35597   GGCCAACACCATCGT                 CGGC GAC GCGG                 TATTTGGACGATAAG  45 1
        hpaE NONE
        hpaD NONE
CWR61_RS03435 NONE
        hpaH  702019 ..  702033 +  -2.8  -3.26471   TACGGTCCGCTCGGC               GCGA TGAGGTT TCGC               TTCGTATAAGGATGG  45 2
        hpaI  702860 ..  702877 +  -9.1  -2.70932   GGTGTACTGACCCCG             CCGG-CGC GCG GCGGCCGG             TCGTTCCGGACAGGC  56 31
CWR61_RS03450 NONE
CWR61_RS03455 NONE
CWR61_RS03460  706651 ..  706667 +  -3.7  -2.52543   CCGCCGCCAATCCGC              TCGATGG AGA CTATTGA              TGGATTACGCGGAGT  41 9
CWR61_RS03465  708128 ..  708160 +  -4.3  -2.83677   GCGCCTGAATGGTGT     CCGTGAAATTTTCT ATATAA AGAAAAATTC-CGG      TATAGTCGATTCGTT  43 50
CWR61_RS03470  709660 ..  709716 +  -6.4  -5.18643   CCAGGTCGCGCTCGA TCTGGCTGAGCATGCCGGTGGCCACGC CCGA GCG-GGCCGCCAGCGTCTGCAGCGATA TTTTCTTTTCCTTGC  89 518
CWR61_RS03485 NONE
CWR61_RS03490  711877 ..  711905 +   -11  -3.35679   GGTTTCAGCCCCGCC       GCGCCGCGCCG CTGAAATC CGGC-CGGCGC        TTCTCGATGAAGGCG  70 46
CWR61_RS03550 NONE
CWR61_RS03555 NONE
CWR61_RS03560 NONE
CWR61_RS03565 NONE
CWR61_RS03570 NONE
CWR61_RS03575  727796 ..  727830 + -17.1  -3.14132   GCTATTTGCCGCGCT    GAGCGCGGGGCCGGGC GGCG GCCCGGC-CCGTGCCC     TTACTGCACCGGCGG  85 24
CWR61_RS03595 NONE
CWR61_RS03600 NONE
CWR61_RS03605  734758 ..  734775 +  -9.1  -3.01712   TTGGCGTCCAGGCGG             CGCTGCGC CCA GCGC-GCG             TATTGCAGCGCGGCC  55 225
CWR61_RS03615  739601 ..  739626 + -11.1  -3.20348   TAACCCGTCATGGTG         GCCG-CCTGGCC GTT GTCCAGGTCGGC         TTCGGTCTTGCTCCA  64 53
CWR61_RS03700  758635 ..  758665 +  -8.9  -2.52464   CTATGGCCTCTTTCA      ATCC-CGCGCCGGG ACGA CCCGGCGCGCGTAC       TGGCTTGAGGACGAC  52 216
CWR61_RS03705  759938 ..  759952 +  -9.2  -3.34962   GGCGTAGTCCGCCTG               GCGGCG GAT CGCTGC               TTGTCCCGTATGGCA  64 90
CWR61_RS03710  761461 ..  761507 + -12.1  -3.66178   TGCCGGCGCGCTAGG GGCGCGCCAG-CGCAC-GCCCCG TCT CGCGGCCGAGCGGCCGGCGCGGC TTTCCCGTTCGCGGG  77 27
CWR61_RS03715  763620 ..  763634 +    -7  -3.14132   GTCCAGCGGACCGCT               GGCCAC CGC GCGGCC               TTGCTCCAGCAGCAC  53 473
CWR61_RS03740  767617 ..  767630 +  -9.5  -3.29829   TGGATGGGCGGCGGG               CCGCG ATGG CGCGG                TTATGCGCCGGTCTC  62 233
CWR61_RS03775 NONE
        rocF  774194 ..  774206 +  -4.8  -3.59979   GCGTCCACCCCTGGT                TGGC CAACT GCCA                TTTGGCGTCGGGCGG  54 361
CWR61_RS03790 NONE
CWR61_RS03795  776439 ..  776463 +  -3.5  -4.88407   GCCGTAGCGCCTTGG          CGGGGCG GTTTACTATTA CGCCCTG          TTTTTCCTTCGCTCG  78 34
CWR61_RS03800  777297 ..  777326 +  -7.1  -3.41051   TGGGCGCCCGGCCAG       GGCTCGAGCACG TAGATCC CGGGCTCG-GCC       TTCTCGTCGGCGTGG  58 97
        apbC  781053 ..  781070 +  -3.3  -3.14125   TGGTGGTCCGGCCCG             CCTGACG CATG CGTCGGA              TATTGCGTGTCTGCC  43 21
CWR61_RS03820 NONE
CWR61_RS03825  786609 ..  786621 +  -7.7  -3.37344   GCGGCCGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  58 49
CWR61_RS03830  787400 ..  787421 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC TTC GTCGGGCTGC           TTCATGTAGCGGGAA  52 216
CWR61_RS03850  789233 ..  789261 + -10.2  -5.24129   TCCTACAATTCCCCC        GAAGTCGGCCCG CTCGT CGGGCCGGTTGC        TTTTTTGTCACCAGC 100 77
CWR61_RS03855  791614 ..  791654 + -21.2  -4.57837   GGGCAGTAAGTCCAA C-GCGCCGCGCCGCGTCGCC CCG GGCGG-GCGGCGCGGCGTTG TTTTTCACGGAGTAT 100 32
CWR61_RS03860  792899 ..  792922 +  -5.9  -3.72481   GCCTGGCGGGCACGG          CGCATGCGG GCAGGG CCGCGTGCC           TATTGTTTTGGTAAA  60 40
CWR61_RS03865 NONE
CWR61_RS03870  794830 ..  794848 +  -5.8  -3.57144   AGAGGGGCGGAAAAT             TCGACCGG TCC CCGGGCGC             TTTCCGCATCGGGGC  57 343
        gcvT  796015 ..  796052 +  -5.3  -3.91897   ACTCGTAAACTCGAG   GCTTCCGCGCGGCCGCC GGCC GCCGGAGGCGCGCAAAC    TTTCTCCATCCCCAC  60 33
        gcvH  796486 ..  796506 +  -8.1  -3.90744   CACCGGGCCGGCCAG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAACAC  67 48
        gcvP  799414 ..  799433 + -16.4  -3.96327   CGCGCCCAGTAGAAA            CGCCGGCC TTCG GGCCGGCG             TTTCTACTGGGGCCT  95 52
CWR61_RS03895 NONE
CWR61_RS03900 NONE
CWR61_RS03905  803543 ..  803576 +  -5.8  -3.37017   GCTGGTCCGGCCCGG     GCCCCCGCCGCCGCG ATCAA CGCG-CGGCGTAGAC     TTCGTCTTCGAAGTT  53 56
CWR61_RS03955  818784 ..  818794 +  -4.6  -3.53811   CTCGGCCGGTTGCGC                 CGCG CGC TGCG                 TTTCGCGCCACTGCC  54 52
        coq7  821944 ..  821967 + -16.8  -5.75342   CCTTTGGTGGATTTA          GCCCGAGATC GCAA GATCTCGGGC           TTTTTTTTCGCCGCG 100 465
CWR61_RS03980  823409 ..  823419 +  -6.8   -3.1506   CTTACAATTCCGTAG                 CCGT CAC ACGG                 TTGATAGGGAGATTT  51 100
        tviB NONE
        tviC  825733 ..  825745 +  -4.8  -3.52204   CCATGCCCTGGTACA                CGCA ATTCC TGCG                TTGATTTGAAAGTCA  53 9
CWR61_RS03995 NONE
CWR61_RS04000 NONE
        asnB NONE
CWR61_RS04010 NONE
CWR61_RS04015 NONE
CWR61_RS04020  833691 ..  833703 +  -2.6  -3.31144   ATCCTGCTGGTTCAC                CTCG CTCGA CGGG                TTCTCCAGCTCGCGG  45 93
CWR61_RS04035 NONE
CWR61_RS04040 NONE
CWR61_RS04045 NONE
CWR61_RS04050  841098 ..  841124 +  -5.9  -5.40072   ATTTGACATCGATTT        GACGCCCAA-CA GGTA TGCTTGCGCGTC         TTTTTTTGCAACGAG  93 88
CWR61_RS04055  843096 ..  843123 + -21.4  -3.14132   CGCAAAAGCAAAACG        GGTGCCTGTCCC GGTT GGGACAGGCACC         TTCGTCACCCGCGGG 100 44
CWR61_RS04070  847187 ..  847205 +  -8.8  -2.83164   AGCAGCAGGATCAAC             GCCGCG TTCAGCT CGCGGC             TCTGCTCGTCGCTGA  53 135
CWR61_RS04095 NONE
        lolB  853462 ..  853476 +  -4.2  -2.52896   GGCGGTCTAGAATAG               GGGC ATCCCCA GCCC               TGGCTTCCGCCGTGA  41 47
CWR61_RS04105 NONE
CWR61_RS04110  854483 ..  854525 +  -4.2  -5.79595   CCAATACATAAAAAA GCTGTTGAAC-G-CGCCCGT CAGAC ACTGGCTCCAGTTCAGCAGC TTTTTTGTTTTACGA 100 43
CWR61_RS04115  855603 ..  855627 + -12.8  -3.02043   GCGGCGTGCAAAAAC          CACGCAGCGC ATGTC GCGCGGCGTG          TCTTAACCGGCGATT  71 81
CWR61_RS04120  856338 ..  856376 + -24.8  -2.91695   CGTGCCCGACGTCCC   CGAAACCCTGCGCATGCG ATT TGCATGCGCAGGGTTTTG   TACTTTACAAATACG 100 79
CWR61_RS04125 NONE
CWR61_RS04130 NONE
        ychF  859036 ..  859049 +  -2.3   -3.4758   GCTTGCCAAACAATA               CGGTC TGCT GAGCG                TTCCTATTGTTCATC  47 109
CWR61_RS04145 NONE
CWR61_RS04150 NONE
CWR61_RS04155 NONE
CWR61_RS04160 NONE
CWR61_RS04165 NONE
CWR61_RS04170  870696 ..  870707 +  -2.2  -3.59252   TTTTCTTGATGCTTG                CCAG CAGG TTGG                 TGTTCTTTGATGGAG  50 4
CWR61_RS04200  878697 ..  878714 +    -4   -5.1675   GGGCCACGCGGCAAA             CCCGCC GGATCG GGCGGA              TTTTTTCCTGCGTGC  87 40
CWR61_RS04230  887077 ..  887125 + -10.2  -3.35679   CGCCGCAAGTCGTCG CGGCCCGGCGTGCCCGGCTCGC GCCGACA GCG-GCCGGGC-CGGTGGCCTG TTCTCACTGGAAGGG  67 207
CWR61_RS04235 NONE
CWR61_RS04240 NONE
CWR61_RS04245  890768 ..  890817 + -10.6  -5.07011   ACCGCATCGGCGGCG CGTATTAGGGCC-GGCGGGCGTCC GTCG GGACGCC-GCCTGGCCCGGGATCG TTTTTCCTTTATCTG 100 18
CWR61_RS04250 NONE
CWR61_RS04255  894317 ..  894340 +    -8  -2.65815   CGAAGCGCCCGACGC          TGGCGGGCAG TTGC CGGCCGGCCA           TGGTCTGGATGTGCA  48 349
CWR61_RS04265  896089 ..  896105 + -13.7   -5.1861   CTGTCCGGAACAAAA              GCCCTCC ACC GGAGGGC              TTTTTTCGTGGTGGC 100 48
CWR61_RS04280 NONE
CWR61_RS04285 NONE
        ftsY  904247 ..  904272 + -20.5  -2.90496   GTGCGCGCCTGATTG         CAACGCCGCCC GCAA GGGCGGCGTTG          TCATTTCCAGAAAGG 100 46
CWR61_RS04350 NONE
CWR61_RS04355 NONE
        nusB  913691 ..  913727 + -12.1  -3.72695   CGCCGCGGCGCTGAC    CTTCCGCGGACGCGCCG ACG CGGCGCGTCCGTTCGCG    TTTGCTGGCAGGAGT  80 27
        thiL NONE
CWR61_RS04370 NONE
CWR61_RS04375  916104 ..  916147 + -14.4  -3.28745   GCAGGCACCCGAGAA GTCAGCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGGGGGG TTACGTTCTTACCGC  78 288
CWR61_RS04400  923096 ..  923119 + -15.2  -5.75342   AGCGCCATGAAAAAA          CCCCGCCAGG CGAA CCAGGCGGGG           TTTTTTTTCGGGAAG 100 44
CWR61_RS04415  925732 ..  925743 +  -2.2  -2.79878   AGTTGTCCATGCCAC                GCTT GCAC GAGC                 CTTTCGATACGTACG  40 46
CWR61_RS04420 NONE
CWR61_RS04425  927548 ..  927559 +  -2.2  -2.90496   GGCCCGCGGCCCATT                GATG TTCC CGTC                 TCGTTTCAACAGAGG  40 24
        arsC  927993 ..  928004 +  -2.2  -3.63073   TCGACGCGGAGGGCC                GTCG TGTC TGAC                 TTGTTCGCAGATCTG  50 15
        arsH  928734 ..  928772 + -13.6  -3.55444   GTCGGAGCTGCCCTG   CCCGCGGGGCCAGGCCCC TCG GAGGCTGGCCCCCGCTGG   TTTCAACGCTCGGGG  81 41
CWR61_RS04470  937124 ..  937141 +  -6.3  -3.02144   GCGAGGTAGTCGTCC             GCGCCTTC GCG GAA-GCGC             TGTTCGGCCAGCTGG  48 192
        cueR NONE
         fdx  943993 ..  944007 +  -2.8  -3.09803   ACCCACCCACCAACC               CTCC AACGAAA GGAG               TCTTCCATGCAGTTC  43 116
CWR61_RS04500  944224 ..  944274 +  -3.8  -2.92439   CGGCCGGCCGCGGCC GGTCCTCGTGC-CTGGCCGGCCG CGGAAT CCGCTTGACAGCGCGCGGGGGTC TCATTTAAAAGTATT  44 41
CWR61_RS04505  945341 ..  945380 + -12.8  -3.14211   GCCCCAGTAGCGGCG  AGGCGGCGGCGGATCCGCG GCG CGC-GATCCGCTACTGCCC  TTCGTGCACGGCGAT  72 31
CWR61_RS04530 NONE
CWR61_RS04535  950881 ..  950897 +  -3.6  -3.22521   CGCCGAAAACGTCCT              GAGCCG ACAGC CGGGTC              TTCGCTTGCTATCGA  45 24
         ggt NONE
CWR61_RS04545  953529 ..  953544 +  -4.6  -3.64259   ACGATCCATTGCAGG              TCGTCC TGTC GGGCGG               TTCTTAGCGCTAATT  54 487
CWR61_RS04570  958893 ..  958906 +  -3.7  -4.19258   TAATGAGCGGGTAAT               GCCGC CGGT GCGCC                TTTTGACTACGATCT  62 38
CWR61_RS04575  960150 ..  960166 +  -7.9  -3.61398   GCGAGACCATGCCCA              CGCCGAC GCT GTCGGGG              TTCTTCCGGACCCAG  60 524
CWR61_RS04600  965067 ..  965122 + -10.3  -3.08679   CGCCCAGCGATTTCG CGCGGTACATGGCGC-GGTCGGCGGCC ATGA GGCTGGCGGCCAGCGTCGCGTCCC-CG TGTTCGATGCGCGCC  59 72
CWR61_RS04670  980154 ..  980201 +   -17  -3.01712   CCGCCGGGCCGGGGG CGCGG-GCCTGGCGCCG-GGCC GGGCGG GGCTGCGGCGCCGGGCGCGGCG TGTTCGACAGGCGGC  82 88
CWR61_RS04705  988819 ..  988841 +  -9.1  -2.78384   GGCGGGACTGAAGGC          CGGCC-GGGC CGCG GCTCAGGCCG           TCTCGTAGACCAGGA  56 30
CWR61_RS04755  998745 ..  998775 +  -4.6  -3.14132   GGCGGTTGATCGCGT      TCAGGCCCGC-GC CGCCCA GCAGCGCGCCGGA       TTCCTGCGAGAACAC  47 311
CWR61_RS04775 NONE
CWR61_RS04780 1002642 .. 1002668 + -13.6  -2.57013   GCCAGTTCCCATCCG         GCGACCGGCGCG CCG CGCGGCGGTCCC         TGCCTTCAGTTCCCA  70 109
CWR61_RS04790 NONE
CWR61_RS04795 1005915 .. 1005931 + -10.8  -3.29144   CCAGCAGATCGGTCA              GGGCGG GGCCG CCGCCC              TTGTACGGCGCATGC  66 434
CWR61_RS04805 NONE
CWR61_RS04810 NONE
CWR61_RS04815 NONE
CWR61_RS04820 1010725 .. 1010743 +  -8.1  -2.52464   GGGCGCACGGGCTTG            CCGC-GCG CCAG CGCCGCGG             TCAGTTCCGGGCGCG  50 91
CWR61_RS04830 NONE
CWR61_RS04835 1013876 .. 1013887 +  -7.2  -3.84639   TCGACCACGATCACC                CGGC GTAT GCCG                 TTGTTCTCCATCTTG  67 158
CWR61_RS04850 NONE
CWR61_RS04855 NONE
CWR61_RS04860 1018725 .. 1018772 + -12.7  -3.14132   CCAGTGCCGGGCCGA TTGTTC-GCG-GTGCGCGTCGGC CAGG GCCGGCGCGCCCACGCAGATCAG TTCCTCGCGCGCCAG  68 390
CWR61_RS04870 NONE
CWR61_RS04875 NONE
CWR61_RS04880 NONE
CWR61_RS04885 1024313 .. 1024350 +  -6.8  -2.91695   CCATGGCGCGCATCG   CGGCGGCGTGCGCCCGG CTGTC CTGAGCGC-CGCGGCAG   TCCTTTCCCAATGAC  50 0
CWR61_RS04890 1025297 .. 1025324 +  -9.9  -3.31792   TTACTTGGCGGTGAT        CTTCGCGTCGCG GATGA TGCG-CGCGAAG        TTGTCCACGTCCTGG  64 69
CWR61_RS04930 1032715 .. 1032740 +  -3.1  -3.35706   GCCGGCCGGCCGGGC         CGCCGAAAACC GGGC GGTTGCCGGCA          TTGTGGGGTATGGTT  47 50
CWR61_RS04935 1034190 .. 1034242 + -15.5  -2.55015   CCAGGCCGCCGCCCC TCAGCCGGGCGGCGGGCCGCCCGCG CCGGT CGCGGCCGGCGCGT-GCC-GGCGGA TCCATTCGATGGCCT  77 56
CWR61_RS04945 NONE
CWR61_RS04950 NONE
CWR61_RS04955 NONE
CWR61_RS04960 1039307 .. 1039357 +  -6.2  -3.34013   CATCTGGTACAGGTG CAGGACGCTGCCGCGTTCGGCGA-CG ATG CGCTCGACCAGCG-GGC-GCG-CCTG TTCATTGCCGAGATC  52 507
CWR61_RS04980 NONE
CWR61_RS04985 NONE
CWR61_RS04990 NONE
CWR61_RS04995 NONE
CWR61_RS05000 NONE
CWR61_RS05005 NONE
CWR61_RS05010 NONE
CWR61_RS05015 1049163 .. 1049180 +  -4.7  -2.87132   CGGACCGTTACTTTT             CGCGCCT TTCG GGGCGCA              TCTCTCCAGGAGAAA  45 163
CWR61_RS05020 NONE
CWR61_RS05025 1050928 .. 1050953 +  -4.6   -3.0263   CTATGATGCACGGGG         CGCGCATCGC CGCGCC GCCATGCCCG          TATTCGCCGAGTCGT  46 35
CWR61_RS05030 1051495 .. 1051509 +    -7  -2.78216   CATGGCGCGGCGCCT               GCGGGC TGG GCCCGA               TACTTGCTGGCGCTC  48 50
CWR61_RS05035 1051898 .. 1051909 +  -7.2  -3.36823   GGTGGCCGAGAACTT                GGGG CCGA CCCC                 TTGCATTTTCAGCGG  55 201
CWR61_RS05065 1057873 .. 1057906 + -16.8  -4.33153   CGGTGGTAAAAGTCA     GCTGGTGCCTGTCC GCGTGG GGACAGGCACCAGA      TTTATTCCTGTTCAG 100 247
CWR61_RS05070 NONE
CWR61_RS05075 NONE
CWR61_RS05080 1060911 .. 1060923 +  -2.7  -2.78813   AAAAGAATAAGTCTA                TGAAT ATT ATTCG                CTTGTTGCGATAAGC  40 47
CWR61_RS05085 1061997 .. 1062016 + -16.4  -5.66684   GTGATGTGGCAGGCG            GGCGGCCC GGAC GGGCCGCC             TTTTTTTGTCAGTTG 100 37
CWR61_RS05100 1065695 .. 1065753 +   -11  -3.01924   ATCCGCGCGCCTAGC CGCGC-GGCGGC-TTGAGCGGCAGGATGC GCCG GTAGCCTGCCGG-CAGCGGCGCCTGCGCG TGTTCGCCGACCGTG  65 11
        mgtA NONE
CWR61_RS05125 NONE
CWR61_RS05130 1072475 .. 1072531 + -24.6  -3.06302   CTGAAACCCTAGACT CGGACGT--CTGTCCCGGCGGGGAAAGG GTG CCTGTCCCCGCCGGGACAGGCACGCCTG TTACGTAAAAATAAT 100 29
CWR61_RS05135 1073719 .. 1073745 + -15.9  -4.03234   CAGCATCAACTGACG        CGGCGGCACGCC GCGC GGCGTGCC-CCG         TTTCTCTCCCAGCCA  95 28
CWR61_RS05140 NONE
CWR61_RS05145 1076009 .. 1076024 + -10.4  -2.70932   GCTGCGCGACCGCCT              GCAGGC GCAG GCCTGC               TGATTCCCCACGCCA  59 7
CWR61_RS05150 NONE
CWR61_RS05155 NONE
        dapA NONE
CWR61_RS05165 NONE
CWR61_RS05170 NONE
CWR61_RS05175 1081255 .. 1081271 +  -3.5  -2.53876   CCTTCATGGGGTGAC              GGCGGCG GCG CGCCGGA              TCGCTTAACCTAGGG  39 27
CWR61_RS05180 1082217 .. 1082262 +  -8.7  -3.01712   ACCGTGCGGGCCTGG CGCCCGGCGCCTGAGC-CGGCG GTG CGCCGCGCGCGCCCGCCCGGGG TATTCCGCGCCGGAA  56 12
CWR61_RS05185 NONE
CWR61_RS05190 NONE
CWR61_RS05195 1085292 .. 1085302 +  -4.6  -3.31144   CGGTGTCGGGCTGTA                 CGTC CAG GGCG                 TTGTGGAACTCGGGC  49 275
CWR61_RS05215 1088889 .. 1088899 +  -8.2  -3.13403   CGCCCACTTCGAAGG                 CGCG CAG CGCG                 TATTGCTCGGCCGGA  56 391
CWR61_RS05230 1091626 .. 1091641 +    -9  -2.79183   ATGCGGCGCGCCAGG              TCGAGC GCGC GCTCGA               TGTGCTGGCCGTAGG  52 224
CWR61_RS05255 1097921 .. 1097933 +  -6.2  -3.32844   CTTGTTGCTGTGCAC                CGCC TTGCC GGCG                TTCTAGCATGGGGCC  53 7
CWR61_RS05260 1098760 .. 1098771 +  -7.2  -3.05384   CTGCTGCAGGTAGCC                GGGC GACA GCCC                 TTGCATCAGCGACAG  52 172
CWR61_RS05285 1104142 .. 1104169 + -10.6  -4.07568   GGTTGCTGAAGGGGC        GGCGGTCCGCA CGCTGGC TGCGG-CCGCC        TTTTCCAGGAGCAAG  79 93
CWR61_RS05290 1104782 .. 1104810 + -10.1  -3.85092   CCGGCGATGCGGGCG        GGCTTGCGCGCCG GCG CGGCGCGATGGTC        TTTGCTGTCGCTCAT  73 114
CWR61_RS05305 NONE
CWR61_RS05310 1107660 .. 1107693 +  -7.4  -3.04144   GGCGCGGCGCGCGCG     GCC-CACGCCGGC ATGACCGTG GCCGGCCTGTGGC     TGTTCGCGATGGCGC  54 10
CWR61_RS05315 NONE
CWR61_RS05320 1108870 .. 1108890 +  -8.9  -2.62616   GAAAGTCGGCCAGGC            CCTTGGCGC CTT GCGCCAGGC            TGATGTGGCGCATCA  51 76
CWR61_RS05330 NONE
CWR61_RS05335 NONE
CWR61_RS05340 NONE
CWR61_RS05345 NONE
CWR61_RS05350 NONE
CWR61_RS05355 NONE
CWR61_RS05360 NONE
CWR61_RS05365 1117604 .. 1117645 + -21.7  -2.71712   CGGGGGCGCGGCGCC CGCGCGGCGCCGCC-GCCT CAGGAC AGGCCGGCGGCGC-GCGCG CTTTCGGCCGACAAG 100 42
CWR61_RS05375 NONE
CWR61_RS05380 NONE
CWR61_RS05385 NONE
CWR61_RS05390 NONE
CWR61_RS05395 NONE
CWR61_RS05400 NONE
CWR61_RS05405 1125021 .. 1125036 +  -3.2  -3.11634   TATCTTGGGGAGAGG              GGGC-GC GAT GCTGTCC              TTGCATAATGTGGAC  43 2
CWR61_RS05410 NONE
CWR61_RS05415 1127242 .. 1127283 +  -9.3  -3.57387   CTTCTCGCACCGCCA CGATCT-TGACGGCCGCGCC TTC GATGCGGCCGACATAGGCCG TTTCGCCGGTCTGTT  63 440
CWR61_RS05445 NONE
CWR61_RS05450 NONE
CWR61_RS05455 NONE
CWR61_RS05460 NONE
CWR61_RS05465 1138032 .. 1138048 +  -2.1  -3.61178   CTCTCCAGGCACCCG              CCGCATG CAG CCTGCTG              TTTGCCGTGGCTCGC  50 258
CWR61_RS05475 1139712 .. 1139726 +  -3.5  -2.70932   GTCCAGCTGCTGGAG              GC-CGC CCAT GCGCGC               TGATTCGAACCCGGG  40 8
CWR61_RS05480 NONE
CWR61_RS05485 1141461 .. 1141477 + -10.8  -3.36492   GCCTGAAGGTGTCGA              GCGCCG GCGAG CGGCGC              TTGTAGCCTTCGGGC  67 35
CWR61_RS05495 1143427 .. 1143442 +    -6  -3.33696   TCCAGATCAACTGAG              CCGGCC GACC GCCCGG               TTCATTACCCAGGAG  53 27
CWR61_RS05500 1144851 .. 1144874 +   -21  -3.33696   GAGCGGCGGCGCCTG          GCCGGCCCGG CCGG CCGGGCCGGC           TTACTTCAGCGCCGG 100 39
CWR61_RS05510 1146920 .. 1146954 +   -15  -4.26076   CCCGCCGCTCATCCC    GGCGCGGACGGCTTC CCTGGT GGGGCCG-CCGCGCC     TTTTCATGGCGGTGC 100 70
CWR61_RS05515 1147650 .. 1147660 +    -4  -3.73647   TGGCCGGCCGCGTCC                 CAAT CGT ATTG                 TTCTTCCTGCATGGC  55 240
CWR61_RS05530 1150942 .. 1150984 + -12.6  -3.16564   GGCCAGGCTGATCAG CGCGGCGAACATGGTGCTGG TGT CCAGCGTGGTCGTCGCCGCG TTGATCAGGTAGCCC  68 140
CWR61_RS05565 1156610 .. 1156656 +  -4.2   -2.5474   TCTGGCGTAAGGCGC GCGCCGGCGCTTGACCTTCCAA TAA TGGGAAGGTCTACAGTGGGGGC ATGTTATCGATCCCC  41 31
CWR61_RS05570 1159175 .. 1159188 +  -3.8  -3.53012   GCACCGTTCGCGGCG               CGCT AAGATC AGCG                TTTCGGGCCGCGGCG  51 20
CWR61_RS05575 1159937 .. 1159961 +   -15  -3.29325   ACCGTGTCGGTATCC         GCGGGCGCGGG CGTG CCCGCGC-CGC          TATTCATTGTAGGAA  83 50
CWR61_RS05580 1161229 .. 1161255 + -12.2  -3.14931   CACCCCGTAGCGCAT         CGCGATGCGCAG CAG CAGCGCATCGAG         TTCCTGCAGGATGGG  68 70
CWR61_RS05590 NONE
CWR61_RS05595 NONE
CWR61_RS05600 NONE
CWR61_RS05605 1166138 .. 1166177 + -22.2  -2.77962   CTCTGAAGATGCCGC  CGGCCCCTCGGCG-TCCTG TAT CTGGAACGCTGAGGGGCCG  ATTTCGCATCTAGGC 100 35
CWR61_RS05610 1166928 .. 1166967 +   -30  -3.68351   GGCAAGTAAGCGGCG  CCGCGTCCCGGCCCGGCG TGCG CGCCGGCCCGGGGCGCGG   TTTCACTCCTGCGCC 100 32
CWR61_RS05660 NONE
CWR61_RS05665 1189787 .. 1189825 +  -8.7  -4.36914   CCAGCACGTAGTCCA  CCTGGCCGCCGGC-CAGG TCGG TCAGCGCCGGCGGCTGGC   TTTTGTACGGCACGC  78 443
CWR61_RS05695 1195326 .. 1195344 +    -8  -3.25015   TCCAGCGGTACCGCA             GGCGCCGC GAT GCGCTGCC             TTGATCCTGCTTGAC  57 3
CWR61_RS05700 NONE
CWR61_RS05705 NONE
CWR61_RS05710 1197139 .. 1197180 + -11.3  -4.07568   GCCGGCGAACCGGGC GGGCACGCGGGCGCCGCGA TGCC TCGCTACGGCCGCGCGCCG  TTTTGCCCGGCCACC  81 55
CWR61_RS05720 1199297 .. 1199307 +  -6.8  -3.58726   CCTCCAGCCACGAAT                 CGAG TGG CTCG                 TTGTATATCGGAAAG  57 272
CWR61_RS05730 NONE
CWR61_RS05735 1201552 .. 1201606 +    -7  -3.36878   AGCGACGGCTGAGGT TG-GCGAGGGCCGGCCTGGGCCGAA ACGATC TTTGGATCGTGCCGGCCGCCGCGCA TTGTCAGTGCGTCAA  55 56
CWR61_RS05755 1206139 .. 1206159 +  -3.9  -2.52464   GGCATGGATACCGGC            TTCGACCAG TGT CCGGTCAAA            TACGTTGCGCGCGAC  39 124
CWR61_RS05765 1208458 .. 1208471 +  -9.5  -3.85698   TTTCGGCTTGCCGCG               CCGGC GTTG GCCGG                TTTATGAGCAGCGCG  73 5
CWR61_RS05770 1211424 .. 1211442 +  -5.2  -3.83324   GGGGCCGAACACCAT             CGAGCAGT CAC ACAGTTCG             TTTCCGTCTTTGTCG  60 493
CWR61_RS05780 NONE
CWR61_RS05785 1213404 .. 1213420 +  -2.1  -3.14211   CCCAAGGCCGCCGCG              TAGGCTC ACG GGGCCAG              TTGGTAGCCCGAGAT  42 23
CWR61_RS05795 1215386 .. 1215402 +  -9.3  -2.78384   GGGCAGGAGTCGCGC              GGGCCGG GCG CCGGGCC              TATACTCCAGCGGAC  56 48
CWR61_RS05800 1217431 .. 1217473 + -11.1  -3.53811   CTGGCGCTGCTGGTG CCGCCCGCCTGGGCCTGGC AGGCG GCCATGTCCTGCTGGGTGG TTTCGGGAGACTGCC  72 396
CWR61_RS05810 1218098 .. 1218111 +  -9.5  -3.54158   CACGGACCGCATGCC               CGGCC GGAC GGCCG                TTCCTTGTTAGCATC  65 139
CWR61_RS05820 NONE
CWR61_RS05890 NONE
        cydB NONE
CWR61_RS05900 NONE
CWR61_RS05905 NONE
CWR61_RS05910 1234885 .. 1234919 +  -9.8  -3.14132   TGCGCACCGCGTCGC     CATTGCCGATGCCCAG GCG CAGGGCGTCGGCGCGG     TTGATCGAGACCGGG  60 338
CWR61_RS05930 1240640 .. 1240656 + -10.1  -2.72379   GGGTGATGCAGTCGG              CCTGCTC GTC GGGCAGG              TCGTTGAGAAATTCG  56 404
CWR61_RS05960 1247043 .. 1247076 +  -5.1  -3.58343   GCGCGGAGGGCGCCG     TCGGCGCGCGTCACCG CAT CGGCGGCGCG-GTAGG     TTTCGCGGTAGTGGC  54 404
CWR61_RS05970 1248506 .. 1248539 + -18.1  -3.37796   GTCGGCGCCGCTGCT     GGGCGCGCTCATGGC CAGC GCCTTGACCGCGCCC      TTGTCGATCATGGGC  87 329
CWR61_RS05990 1251572 .. 1251600 +  -6.6  -3.12847   ATGGGATAGTCGGGC       GTGGGCG-GGCAG TCGG CGGCCGCGCCCAG        TTCGGTGTAGCGGTT  50 226
CWR61_RS06025 1258537 .. 1258552 +  -2.4  -3.14344   ACGATATCCTGCGCG              CCGCCG ACCG CGATGG               TTCGTAGGCGCCATG  42 3
        ppk2 1259812 .. 1259857 + -13.9  -2.95106   TGGCGCAGCTCGGCC ACTTCGCGCGCCAGC-GCGTCG ATC TGGCGCTGCTGGCGCGCCACGA TCTGGTTGAGTTGTT  68 121
CWR61_RS06040 1260622 .. 1260650 + -13.2  -4.62984   AGCCTACGAATTCCC        AGAAAACCCGCC CTCGA GGCGGGTTTTCC        TTTTCTGTCTCCTGG 100 138
        ilvA 1262433 .. 1262446 +  -3.7  -4.56597   TTTGTCTCCTTTTCA               CCACC TTTC GGCGG                TTTTTGGCGGCAAAA  71 188
CWR61_RS06050 1262903 .. 1262914 +  -7.2  -3.53811   CCGCCTGATCCTGGG                GGGC GCGT GCCC                 TTTAGGCCGCGTCGG  57 33
CWR61_RS06060 1264973 .. 1264987 +  -5.7  -3.01712   GCCGAGAAAGTACTC               GGACT GCCCA AGTCC               TATTGAGGAGCCCGC  48 5
CWR61_RS06065 NONE
CWR61_RS06070 1266696 .. 1266706 +  -2.4  -3.53012   CGGCACCAGGGCCAT                 GCCG ATG CCGC                 TTTCGGCCAGCGCGA  47 233
CWR61_RS06080 1268773 .. 1268807 +  -6.3  -3.65522   AGGTGCCGGCAATCG    CGCCGGCC-AC-CGCCG GAC CGACGAGCAGGCCGGTG    TTGTTGCCCTGCATG  57 138
CWR61_RS06090 1270950 .. 1270978 +  -5.7  -2.74371   CTACTTCCTGCACAG        GGCGGGCCGCGCG GCT CGCGAGTCCCTCA        TCATGTTCCAGCATT  46 98
CWR61_RS06095 1271567 .. 1271589 +   -17  -3.07816   AGGTGGGCGCGCTGG           CGGTCGCGCG GGG CGCGTGACCG           TTCCATGGGTGGGAC  85 6
CWR61_RS06100 1272755 .. 1272772 +  -9.8  -5.93809   TCGTAGCAACCTCTG             CCGGCG TTCATC CGCCGG              TTTTTTTTGTCCGGC 100 212
CWR61_RS06105 1273860 .. 1273880 + -16.9  -3.08642   CCGGGAAACCGCCGC            CGCGGATCG CCG CGATCCGCG            TTCCCTCCGTAGTCT  85 184
CWR61_RS06110 NONE
CWR61_RS06115 1275672 .. 1275690 + -13.2  -3.53012   GATTGAAATCAAGTG             GTGCGACA TTT TGTCGCAC             TTTGCGCAGCCGGCC  78 35
        cyoA NONE
        cyoB NONE
        cyoC 1279368 .. 1279380 +  -3.3  -2.62184   CACCTTCGTTTACCT                GATGG GAG CCCTC                TGATGTCGCACGCGG  39 10
        cyoD 1279750 .. 1279771 + -18.7  -3.90744   GGCATCGATGCAAAA           GGCCGGCGC CACG GCGCCGGCC            TTGTTTCACCGACCA  95 45
CWR61_RS06145 1282149 .. 1282164 +    -4  -3.25823   GGCCAGTACGTTGAC              GG-CGAA TCC TTCGACC              TTGGTCTGGCCCGAC  47 411
CWR61_RS06180 1285694 .. 1285720 + -11.5  -4.11484   GCAGCCGCGCGCCCC        GCCCGCCGCCGC CTGA GCG-CGGCAGGC         TTTTCGCGGCTTGCG  81 10
CWR61_RS06185 NONE
CWR61_RS06190 NONE
CWR61_RS06200 1291699 .. 1291715 +  -5.7  -3.44229   CTGCGTGCAATCCCG              GGGGTGC CGG GCGCGCC              TTGTCGTCGTAAGCT  55 54
CWR61_RS06205 NONE
CWR61_RS06215 1293280 .. 1293290 +  -2.4  -4.03234   TTTCCGCGACTGACC                 TGCG GCG CGCC                 TTTCTCTCGCCGAGA  57 28
CWR61_RS06220 1293868 .. 1293880 +  -3.3  -3.14132   CGTGTTCCGCTGAGC                TTCCC GCC GGGCA                TTCCTGCCCGGACGG  43 28
CWR61_RS06225 NONE
CWR61_RS06230 1295019 .. 1295037 +  -4.5  -3.72576   AGCTGAGCGACGCGC            GCCG-GGC GGAG GTCGCGGC             TTTCCTGGCGGCCCA  56 119
CWR61_RS06275 1303838 .. 1303852 +  -3.4  -3.53761   ATCGCCGGTAGAATC               CTGCGC ATG GGGCGG               TTTGCGCCCCGGTTC  49 93
CWR61_RS06280 1304366 .. 1304377 +  -5.8  -3.78934   CAGCACCCCCACGCG                CTGG CCGG CCAG                 TTCTTCTCGCAAGGG  61 110
CWR61_RS06300 NONE
CWR61_RS06305 1308429 .. 1308442 +  -3.7  -3.28712   CACGCTCGTCCAGGC               CCAGC CGTC GCAGG                TTGTCGGCGGCGCAG  47 443
CWR61_RS06340 1316661 .. 1316673 +  -4.7  -2.80622   TCCCGCGATTTCCGG                CCGCG TGC CGCGC                TATGATCGACTATCT  45 8
        moaA 1318020 .. 1318061 +  -8.5  -2.64803   GCACTCGGGGGCAGG TTTGCGGGAGCCAGTCCCC ATGC GGGGACAGGCACTCGGGGG  TAGGTTTGCGGGTGC  53 259
CWR61_RS06375 NONE
CWR61_RS06380 1325558 .. 1325583 +  -6.7  -4.11623   TGGTCCTCAGGCAGT         CCGTCGGTCGC CTCG GCGATCGCCTG          TTTCATTTCGTCGTA  69 62
CWR61_RS06390 NONE
CWR61_RS06395 1328295 .. 1328330 +   -19  -3.04144   ACAGGCACAAAAGAT    AGCGGGAGCCTGTCCC CGTT GGGACAGGCTCCCGAG     TATTGGAGCTACCAC  93 141
CWR61_RS06410 1330972 .. 1330994 +  -6.2  -3.66178   TCCGGCGAGCTCGAC           TATCCGCCCG TCG CCGGCTGATA           TTTCGCCTTCACACC  57 5
CWR61_RS06415 1331382 .. 1331404 + -12.7  -3.17571   GCCGGCTCGCGCGAG          CCCGCGCGCC CCAG GGCG-GCGGG           TTCGCTTCGCCGCTT  74 46
CWR61_RS06420 1332100 .. 1332118 + -17.4  -4.04174   TGTGCCCATGACGAA             CGGCCGCC GCG GGCGGCCG             TTTGCTTGTCTGGCG 100 50
        acnA NONE
CWR61_RS06450 NONE
CWR61_RS06455 NONE
CWR61_RS06460 1339980 .. 1340008 +  -2.4  -2.91274   AAGGTAGATTCTCGC       CTGAAG-CGCTGG ACTT TCTGCGATTTCAG        TGTCATTCAAGTAAC  40 84
CWR61_RS06465 NONE
CWR61_RS06470 NONE
CWR61_RS06475 1343850 .. 1343897 +   -14  -3.28924   CCGCTGGCCGAGCTG TATTGAGCGCGTCGCCCGCGTG GCGC CACGCGGGCGGCGTGTACCGGA TTCTCAACGCAACTG  78 20
CWR61_RS06480 1344924 .. 1344947 + -15.2  -2.87132   AGCTGAACTAGGGGC          AGGGCGCGCC GCGC GGCGCGCCCG           TCTCTCAGGCCCGGC  77 30
CWR61_RS06510 1349073 .. 1349088 +  -2.4  -3.85698   TCAGCAGCAGCCCGA              TCAGCG CCAG CGCGGG               TTTGTCGCCGAAGCG  56 78
CWR61_RS06540 1355770 .. 1355799 + -22.9  -5.40072   GCTGCATGTAAAAAA       CCCTGCCCGGCCG TATT TGGCCGGGCAGGG        TTTTTTTACGACCGG 100 311
        dacB NONE
CWR61_RS06575 1363813 .. 1363827 +  -8.5  -5.77853   CGCCCGCAAGAGAAA               CCGCC CCGAA GGCGG               TTTTTTTTCGCCATT 100 59
CWR61_RS06585 1366287 .. 1366301 +    -7  -2.66316   CACGCGGGGGTGCGT               GGCGCG GGC CGCGGC               TGGTATGATGAACGC  48 51
CWR61_RS06590 1366657 .. 1366707 + -10.1  -2.79878   CCTGCTGATCAGCCG CCGCTGATCCCGGCGGGGCGGGC CGCGC GCCCGCCCCGGCATGCACAATGG GTTTGCGTAGATCGG  60 19
CWR61_RS06595 NONE
CWR61_RS06600 1367753 .. 1367774 +  -5.1  -2.82516   ATGGCCCAGACCACT           TCGGCCCAGT CGC GC-GGGTCGA           TGTCCTCGTCGACCA  43 300
CWR61_RS06610 1370376 .. 1370393 +  -4.1   -4.4727   GCGTGGGCGCGCAGA             TGGCC AGGCTGGC GGCCA              TTTTCTCGATCTTGG  70 428
CWR61_RS06620 1372115 .. 1372140 +  -2.3  -3.34398   CGCCTTGCGCAGCCG         GCCAGCCCGTG CGGG CGCGGGCAGCA          TCTTTCCGGCGCGCG  45 54
CWR61_RS06625 NONE
CWR61_RS06630 NONE
CWR61_RS06635 1376552 .. 1376562 +  -8.2  -4.07568   CGACCCGCTGCCAGT                 GCGC CAG GCGC                 TTTTCGGCGCGCGCC  72 412
         tkt NONE
         gap 1380221 .. 1380263 + -17.1  -4.07568   CTGAACAGGGCGCAA GGGCCAGGTTGGTTTTCCC GTCAA GGGGAAACGGATCTGGCCC TTTTCGCAGGCAGGC  95 51
         pgk 1381708 .. 1381723 +    -6  -3.01712   TCGAAGCCGGTGATG              CCCGAG GCGG CGCGGG               TCTTCAGCGGCCCGG  48 227
CWR61_RS06700 NONE
CWR61_RS06705 NONE
CWR61_RS06710 NONE
CWR61_RS06715 1392083 .. 1392117 +  -6.3  -3.64487   GCTGCAGGTCGGCGC    GTTCGCGCG-CCGGCA GGCC TTCCAGCCGCGCGACC     TTCTTGGCCGTATCG  57 456
CWR61_RS06725 1393984 .. 1394009 +  -3.9   -4.7416   CGCCGCCCGGCAATG         AGGCGTGCGCTA TAG TGG-GCGCGCCG         TTTTTCAGATTTTCA  78 25
CWR61_RS06730 NONE
CWR61_RS06735 1395469 .. 1395479 +  -8.2  -3.02511   GCCGAGGCCGAACGC                 GCGC CGG GCGC                 TGTTCAGCCGGTCGG  55 264
CWR61_RS06780 1402220 .. 1402235 +  -7.5  -2.71011   GCGGAACAGGGACCG              GCGCG CCGTCC CGCGC               TGATTGCGAAGGGAT  51 46
CWR61_RS06785 1403486 .. 1403505 +   -15  -5.14563   CGTCGGCCTGGAAAA            CCGGACGC GCGA GCGTCCGG             TTTTTTCATGGCCCC 100 72
CWR61_RS06795 1405099 .. 1405125 + -17.3  -5.26875   GCCGGCATCGCCAAG        GCCCGC-CGCCC TTCG GGGCGCGCGGGC         TTTTTTCATTGGAGG 100 45
CWR61_RS06800 NONE
CWR61_RS06805 NONE
CWR61_RS06810 1406221 .. 1406239 +  -4.4  -2.77523   CCGTGCCCTTGCCGC             TGGCGCTC TGA GTCCGCCA             TGATCTTCCTGCGCA  42 15
CWR61_RS06815 1406821 .. 1406835 +    -7  -3.27676   AAATAGCCGATTCGC               GGCCGC CTG GCGGGC               TGTCTTTCCATCCCT  54 128
        purE NONE
CWR61_RS06825 1408563 .. 1408577 +  -3.4  -2.60075   GCGCTGGGCATGGCC               GCGCCG TTC TGACGC               ATTGATTCCCGCCCC  39 14
CWR61_RS06830 1409661 .. 1409677 +  -7.2  -2.62184   AACTCCTGATTGCCG              CGCCTG TCGGC CGGGCG              TAATCTCACGCGGAC  47 56
CWR61_RS06835 1410847 .. 1410857 +  -2.4  -3.58343   GTCCCGGATTGCGGT                 ACGC TAT GCGC                 TTTCCGCCTCCTGCC  50 84
CWR61_RS06840 1411732 .. 1411769 +    -7  -3.58037   ATAGCTCAGGTATTT   GA-CGGGAAGGCAAGGG GAATA CCCTAGCTTTCCGGATC   TTTCGCGCGTTGATA  59 41
CWR61_RS06845 NONE
CWR61_RS06850 NONE
CWR61_RS06855 NONE
CWR61_RS06860 1415129 .. 1415152 + -19.6  -2.75064   TGGGTTGAGCCCGGC          CTGCCGCGCG CGCC CGCGCGGCAG           TGGTTCCATGGCCGG  90 33
CWR61_RS06865 1416839 .. 1416869 +    -9  -3.89956   CCGGCACGCCGGGCG      CGATGCCGC-CGCG CAACA CGCGGGCGGCG-CG      TTTGGTCTATCCTGC  69 55
CWR61_RS06870 1417597 .. 1417635 + -13.1  -3.72695   GCACGCGTAGAAGTT  TGCCG-GTGCCAGTCCCC CTGC GGGGACAGGCACGCGGGG   TTTAGTAGAAGGCCT  84 236
CWR61_RS06885 NONE
        xerD NONE
        ybaK 1423200 .. 1423222 + -12.7  -2.94144   TCGTCGCATGACCAG          GCCGGCGCGC CACG GCG-GCCGGC           TCCTTTCCATGGAGA  71 102
CWR61_RS06900 1423839 .. 1423850 +  -2.2  -3.28712   CCAATACGGCCACCG                GC-CG GGG CGCGC                TTGTCGCGCGCCGGC  44 43
CWR61_RS06905 1424746 .. 1424764 +    -3  -4.07885   CGGATAGTTGCGTCC             CAGCGC GTGGGCG GCGCGG             TTTTCCGAGGACATC  58 485
CWR61_RS06920 1427442 .. 1427456 +  -9.2  -3.28712   AACTGGGAAAACATC               GCCGCG TTG TGCGGC               TTCTAGGCCGCGCGC  62 187
CWR61_RS06925 NONE
CWR61_RS06930 1433552 .. 1433596 +  -7.9  -3.04144   CGCCCGCGCCTGGAT C-G-ACCTGTAGCGCAGGGCG CCAGT CGCCTTGCGGGACAGGTACCG TCTTGGCCGTCAAGC  54 16
         ffs NONE
CWR61_RS06940 NONE
CWR61_RS06945 1437059 .. 1437092 + -14.5   -2.6927   GCTGCCGTTCTGATA     ACGC-CTTGGCGGCCC GCC GGGCCGCCGGGCGCGC     TGCTGTCTGCGCGAT  75 28
        recR NONE
CWR61_RS06955 NONE
CWR61_RS06960 NONE
CWR61_RS06965 NONE
CWR61_RS06970 1442198 .. 1442241 +  -5.7  -4.02817   ATTGCACGCCCGGAT CGTCGGGGCCGCGGCGCTC ATCCTC GACCCACTCGGCGCCGGCG TTCTTCTTGTGCCAG  66 438
CWR61_RS06980 NONE
CWR61_RS06985 1447442 .. 1447473 + -18.8  -5.53991   GCGCCTCGAACGTCC      GCCCCATCCACGGCG CCA TGCCG-GGATGGGGC      TTTTTTTGGTGCCTG 100 45
CWR61_RS06990 1448450 .. 1448508 +  -9.6  -2.79796   TGGCGGGCTAGCGTC GATGGC-GTACG-GCAGTGTGCCTGTCCC CGCG GGGACAGGCACAC-GCACGGGCAGGCGCC TGTCGTGGCGTCAGG  58 138
CWR61_RS07025 1456352 .. 1456367 + -11.8  -3.01712   TTCTTCCATCGCCGT              GGCCGC CGCC GCGGCC               TGTTCGACCAGCGCG  62 201
        greA 1459143 .. 1459176 +  -8.8  -2.82623   GGTATTCATCCGAAT     TCCTGAACGCCGGGC CGTGC GCCCGGCGT-CTGCA     TCGTTGTCGCGCCGC  55 231
CWR61_RS07045 NONE
CWR61_RS07050 1462666 .. 1462682 +  -2.2   -2.8372   TACGGCGGCTGCGGT              CTGAGC CTGCT GCTAAG              GTTTCATGGCAAATA  40 22
        folP NONE
CWR61_RS07060 1464907 .. 1464926 + -16.4   -4.8622   CCGGACCTGCCCCGA            GGCCCGCC TGAC GGCGGGCC             TTTTTCGTTGCGCGG 100 47
CWR61_RS07065 1466021 .. 1466048 + -21.4  -3.48276   GGACTGAGCAGCGGG        GGTGCCTGTCCC AGTG GGGACAGGCACC         TTGTATCCGGGCGGG 100 146
        ppk1 1470119 .. 1470138 + -10.6  -5.07652   CCGGTCCGCCGCCGC            CGGCCGCC TCCG GGCGGCCA             TTTTGTTTTGAAACA 100 42
        pstS 1471379 .. 1471400 + -10.1  -3.06696   CCTGGCCGGACCAGT           GAACGGCGA GCGA TCGCCGTCC            TGTCTTCGCGGGGCG  63 68
        pstC NONE
        pstA NONE
        pstB 1474166 .. 1474198 + -11.2  -2.69433   GGAAGACTACATCAC     CGGCCGCTTCGGCTG AGGC CGGCCGGCG-GGCCG      ATTCTGGTATAGTTG  62 10
CWR61_RS07100 1474309 .. 1474336 + -14.3  -3.91144   GACCAATAAAATCAA        GGCCTTACAGA AATTGC TCTGTAAGGCC         TTTGTCCAATATGGC  88 36
CWR61_RS07125 NONE
CWR61_RS07130 NONE
CWR61_RS07135 1480422 .. 1480458 +  -8.7   -2.8294   CTCGACCGGCATTCT   GGAGTCG-GCGCACGCC AGGAC GGCG-GCGAACGGCTCC   TGCTTCTGGGCCGTC  53 512
CWR61_RS07150 NONE
CWR61_RS07155 1484725 .. 1484755 +  -5.4  -4.69664   CCGCGCACGAGGCCC       TGCACCGATTGAAC GCA GTCTGATCGCTGCA       TTTTTGACTGGTATG  77 69
CWR61_RS07160 1485250 .. 1485277 +   -22  -3.24747   CTAGGCGCCGCAAGG        GCGGGCGGCGTC CGCG GGCGCCGCCCGC         TTCCTCATGTAAAAC 100 37
CWR61_RS07165 1486108 .. 1486131 +  -4.6  -3.76373   TGTTATGGATTAGCT          GCTGGTTATA TCTG TATGAGCAGC           TTTCAATATTCAGCC  58 77
CWR61_RS07170 NONE
CWR61_RS07175 NONE
CWR61_RS07180 NONE
CWR61_RS07185 1489811 .. 1489824 +  -4.5  -4.01411   CACACGGCCGTGCCG               CGGCT TGCC AGCTG                TTTCCCTTTTTCATC  60 66
CWR61_RS07190 1491199 .. 1491243 + -10.6  -3.51032   CTGCCGGAGAAATCG CTGTCCGCGGTCGCTTCGCCG CAGA CGGCGTAGCGGTC-CGCCCAG TTGTACTTCCCGCCT  69 147
CWR61_RS07200 NONE
CWR61_RS07205 1493622 .. 1493634 +  -6.9  -3.26596   CGATCCCAACCCCTA                TCGCG CCG CGCGG                TTCCATTGATTTCCA  54 4
CWR61_RS07210 NONE
CWR61_RS07215 NONE
CWR61_RS07220 1498545 .. 1498563 +  -3.1  -3.53012   TGCAATAAGCCCGTG            TGCGA-GG CCTT CCGTCGCG             TTTGAGGCGGCGCCG  49 33
CWR61_RS07225 NONE
CWR61_RS07230 1500889 .. 1500914 +  -4.5  -4.11692   CGAGCAACTCAAGGC         CCGGGGAGCCG CAGC CTGATCCCCTG          TTTTCCGCATGACTC  62 7
CWR61_RS07235 1502229 .. 1502246 +  -4.1  -4.16016   CGGCGCATCGCTGCT             GTAGTCGC CCG GCGAC-GC             TTTCTTCAAGGATGA  62 22
CWR61_RS07240 NONE
CWR61_RS07245 NONE
CWR61_RS07250 NONE
CWR61_RS07255 1505522 .. 1505537 +  -4.6  -4.82901   GCCGCTTCCAGCCAA              GACTCG TGAA CGAGGC               TTTTTCTACCCAAGG  80 17
CWR61_RS07260 1506927 .. 1506968 + -20.7  -3.37236   GGCCTGTCGCATCAC GCGCCCGGCCGCCCGCCGC CGAT GCGGCGGGTGGCCGCCCCC  TTCTCCAGTTGGATT 100 43
CWR61_RS07265 1508406 .. 1508420 +  -4.3  -3.11619   GCTGGATTGTGTTTT               TCTTG ATATA CAAGA               TTGCATAAATTATTG  45 48
CWR61_RS07270 1509162 .. 1509175 +  -9.5  -3.54424   CTACGTCGTCTAGCG               CGCGG GCGG CCGCG                TTTCAGCCGATGGCC  65 28
CWR61_RS07330 NONE
CWR61_RS07335 1520817 .. 1520868 + -10.9  -3.28712   CCGCCGTTCCGCTGA GCCGC-ATCGTGGCGCGGGGGAGGGC GGC GCCGTCCCCC-CGCCGT-ATCGAGGC TTGTGCCGAACCGCG  68 26
CWR61_RS07340 NONE
CWR61_RS07345 NONE
CWR61_RS07350 1524140 .. 1524163 +  -2.3  -3.07043   CGGCCCGGCGCGTGC          CCGCGAGGT GACGGA ACCTGGGGG           TGTTGGCATAATCCG  42 44
CWR61_RS07355 1524844 .. 1524869 +  -3.9  -3.39895   CGGATCAGGTCGTCG         CGGATGGCCTGG TGG CC-GGCGATGCG         TTCGTTCATCCAGCC  49 322
CWR61_RS07400 NONE
CWR61_RS07405 1534164 .. 1534203 + -24.3  -3.09327   ATGCGCGCATGTTCC  GCGCCGCCGGACTGCTG CCTTGA CGGCAGGCCGGCGGCGC   TATTGCATGCCGTGG 100 3
CWR61_RS07415 1536162 .. 1536196 +  -9.2  -2.71144   CGGGCACGCGCCTTG    CCGGCCG-AAGCGGC AAGGCG GCCGCTCGCCGCCGG     TCCTTGAAGGAGGTG  56 373
CWR61_RS07425 1536477 .. 1536512 +    -6  -2.52491   GGGGATTTCGAGGAG    CGCTGAGGCGGCGCTCG CGT CGGGCGGGGCGT-AGCG    GTTCGTCAATGTCTA  45 20
CWR61_RS07430 1537668 .. 1537706 +  -2.3  -2.82623   CGGGGCCGGCACGGC  GATTGCGACCGTGCGCCG GTCC TGGC-CACGGTGGCGAAA   TCATTCTGGAGAACA  40 46
CWR61_RS07435 1538693 .. 1538705 +  -4.7  -2.89191   CCGGCCCCCCTTTTG                GCGCG ACG CGCAC                TCTGTGGGAATATGC  45 95
CWR61_RS07440 1540589 .. 1540629 +  -7.6  -3.05343   CTAGCCCAGGTCGGC GCGAAAGCTGCGCTCGCTGC TGC GCAGCAGGCGCA--TGTCGC TCTTGAGCATGTCGA  55 37
CWR61_RS07450 NONE
CWR61_RS07455 NONE
        metC NONE
CWR61_RS07465 NONE
CWR61_RS07470 1547104 .. 1547136 + -18.4  -5.39905   GCGCGGAATAAGGCG     CCG-GGCGGCGCGGC CCTG GCCGCGCCGCCGCTG      TTTTTCTTCTTTCGT 100 30
CWR61_RS07475 1549594 .. 1549628 +  -8.6  -3.14931   CAGTCGGCCAGCAGG    ATCTGCTCCTCGCCGC GGCTG GCGGCG-GG-GCAGAG    TTCCTCGCCGCTGGG  56 119
CWR61_RS07515 NONE
CWR61_RS07520 1557828 .. 1557850 +    -9  -2.98545   CGCCCAGCGCGACCA           CGGCCGCGTA GTG TTCGCCGCCG           TCCTTCTTGTAGCGC  55 400
CWR61_RS07535 1561009 .. 1561027 +    -8  -3.62046   CGAACGCCTGGGCTG             AGCGCGGC GAT GCTGCGCC             TTGTTACCGACATCC  63 25
CWR61_RS07540 NONE
CWR61_RS07545 1561733 .. 1561756 + -11.6  -3.05463   GCTTTCGATCGCGAT          GGTGGCCTGC TGCG GCCGGCCGCC           TTCCATCACGGCCCT  62 235
CWR61_RS07555 1563476 .. 1563489 +  -3.7  -4.07568   CATAGCCGGCATAGT               CGGCG TAAT CGCGG                TTTTCGCGCGCCACG  60 295
CWR61_RS07570 1566465 .. 1566491 +   -16  -5.78622   GGCCAGACCGGAAAT         CCCATGCAGATC GAT GATTTGCATGGG         TTTTTTTTGCGCTGC 100 60
CWR61_RS07575 1569557 .. 1569586 +  -9.9  -3.35867   GGACATCGAGGTGCT       GGCGCGCATC-GCC CAG GGCTGACGCGCACC       TTCCTTCCCCGTTCC  64 4
CWR61_RS07580 NONE
CWR61_RS07585 NONE
CWR61_RS07590 1573138 .. 1573158 +  -3.9  -2.93853   AACACATTTCGTTCA            CGCGACC CTGAGCC GGTCCCG            GTTTCGTTGCCACGG  44 15
CWR61_RS07595 NONE
CWR61_RS07600 NONE
CWR61_RS07605 NONE
CWR61_RS07610 NONE
        accC NONE
CWR61_RS07620 NONE
CWR61_RS07625 NONE
CWR61_RS07630 NONE
CWR61_RS07635 NONE
CWR61_RS07640 NONE
CWR61_RS07645 NONE
CWR61_RS07650 1584726 .. 1584783 +  -5.5  -2.61264   CTGCCGCGCGCCATG GGCATTCCGTGGTGAGGCGC-CGC-CGG AGCGG CCATGCGCGCGCCTGATC-CGGACAGCC CTTATAGCTGGGCGG  45 11
CWR61_RS07655 NONE
CWR61_RS07660 NONE
CWR61_RS07665 NONE
        hpaH 1588806 .. 1588838 +  -8.9  -3.05384   CGAGCAGGCGTGCGC      CGCTGGCGCGCACGC GGC GCGTGGGCGGCCGGG      TTACGTACAGGAGAC  57 156
CWR61_RS07675 1589828 .. 1589857 +  -7.7  -2.63631   CGCGCGCCGCGCGCG       GCATGGCCGGGCG CCGC CGTTCGGCCAGGA        TGCTGTACAGGTTGC  48 51
CWR61_RS07685 1591292 .. 1591302 +  -4.6  -2.57132   CATCGCACACATGTA                 TGCC CCG GGCG                 GTTGTGCCCGGACAC  43 111
CWR61_RS07690 NONE
CWR61_RS07695 NONE
CWR61_RS07700 NONE
CWR61_RS07705 NONE
CWR61_RS07710 1596127 .. 1596139 +  -5.5  -3.04398   GAGGTCATGGGCCTG                TAGGC GGG GCCTG                GTTTTCAAACCGGCA  49 23
CWR61_RS07715 1597431 .. 1597469 + -21.6  -3.06796   ACCGGCTGAGCGGAT   CCGTGCCGCCGGCCCGTC GCG GGCGGGCCGGCGGCGGGC   TTGCATCGACTACGA 100 32
CWR61_RS07720 NONE
CWR61_RS07725 NONE
CWR61_RS07730 NONE
CWR61_RS07735 NONE
CWR61_RS07740 1601985 .. 1602014 +  -8.6  -3.30441   ACCTGGTTGACGTGG       CC-CGGCGTGAGC ACGAA GTTCATGCCGCGG       TTGTGCAGGCTGATG  59 463
CWR61_RS07755 1605042 .. 1605052 +  -4.6  -3.28924   GGATCGCGTTGACAC                 CCTG TGC CGGG                 TTGTCCCCAGCGGTA  49 51
CWR61_RS07760 1606832 .. 1606852 +    -6  -3.30159   GCCTGGACGGGCACA            TCGCGCGC GCGCA GCTCGCGG            TTGTCCAGCCATTGC  52 448
CWR61_RS07795 1612092 .. 1612138 +  -5.8  -3.69354   GACTGGCGCGTCTGC G-GGCTGACGGGCGTGGCGC GAAAGGCCG GCGCTTCGGCCGTC-GCCAC TTTCCGCTTGTCGAA  60 19
CWR61_RS07800 1613247 .. 1613278 +    -5  -3.69354   ATAGGTGTCGCGCCC      CACGCCATCGTG CAGGCGGA CGCGCAGGCGTG       TTTCCAGTTCTCCAA  58 478
CWR61_RS07845 NONE
CWR61_RS07850 NONE
CWR61_RS07855 NONE
CWR61_RS07860 NONE
CWR61_RS07865 NONE
CWR61_RS07870 1623359 .. 1623371 +  -3.3  -2.53263   TTTCAGTTTCACATC                CGGAG TAA CTCCA                TGCATTCAGACTCAG  39 18
CWR61_RS07875 NONE
CWR61_RS07880 NONE
CWR61_RS07885 NONE
CWR61_RS07890 NONE
CWR61_RS07895 NONE
CWR61_RS07900 NONE
CWR61_RS07905 1628230 .. 1628261 +  -3.6  -2.52896   CGCGAGCCGGTGATG      GTCCGGCGCGGCC ATGAACC GGTCG-GACGGGC      TGGGTTCGCCAATGC  39 9
CWR61_RS07910 NONE
CWR61_RS07915 NONE
CWR61_RS07920 1630511 .. 1630523 +  -2.6  -2.64616   GACGCGCCTGATCCA                GGGC CTGGT GCTC                TCCTATCGGTGACCG  38 1
CWR61_RS07925 NONE
CWR61_RS07930 NONE
CWR61_RS07935 NONE
CWR61_RS07940 NONE
CWR61_RS07945 1634987 .. 1635001 +  -6.4  -3.61398   CAACAGCGCGGCCGC               CTCTTC ATA GGAGAG               TTCTTCGACACCGAC  57 159
CWR61_RS07960 1638183 .. 1638213 +  -8.9  -3.15544   CGAGAAACTGGGAAC      GCGG-GCGTCGCGC AGCA GCGCGGCGAGCTGC       TTGATGGACGTCGAG  56 334
CWR61_RS07975 1643727 .. 1643747 +  -3.1  -3.06696   GCAGCTCGGCGGCGA            TGGTGCCCG CCG CGTGCGCGA            TATGTTCCACCGGCA  41 108
CWR61_RS07990 1645864 .. 1645883 +  -2.8  -3.72695   CTTGATGAACGGCTG            CGCGTTCAG GGC CTGCA-GCG            TTTCCTGCCGCGCCT  53 82
CWR61_RS08000 1647520 .. 1647545 + -11.1   -5.4505   ATTCGTTGGAAAACA         GGCACTTAGGC GCAA GCCGAGGTGCC          TTTTTTCTTGGGCGA 100 46
CWR61_RS08010 1650541 .. 1650581 +  -5.1  -2.62184   AGCGAGTGGGATTGA  GAGTGGCCCAGCCCGTCAG CCG CCGGCGGGCTGCGTCTCCA  TGATGTACCGGCGGC  43 40
CWR61_RS08015 NONE
CWR61_RS08020 NONE
CWR61_RS08025 1653578 .. 1653621 +  -6.1  -4.13767   GTGCGTCAAACGCTG CC-TGCAGG--CCGGCTTTTGC CAG GCAACGGCCGGGATCTGCATGG TTTTCCCGTCGCGCC  66 323
CWR61_RS08030 1654262 .. 1654291 +  -2.7  -4.13767   CGCCGTCTTCCAGGA       TGACC-AGGCGGGC GTT GCGCGCATCGGCCA       TTTTCACATCCGACA  61 214
CWR61_RS08050 NONE
CWR61_RS08055 NONE
CWR61_RS08060 NONE
        bamC 1660004 .. 1660027 + -18.2  -5.78622   TGGCGACACAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTTGGCCTGG 100 65
CWR61_RS08090 1665660 .. 1665686 + -21.6  -2.76696   CGGCTGACGCCGTCA         TGCGCGGCGCGC GGC GCGCGCTGCGCA         GTTGTTGCACACGCG 100 34
CWR61_RS08100 NONE
CWR61_RS08105 NONE
CWR61_RS08110 NONE
CWR61_RS08115 NONE
CWR61_RS08120 1672630 .. 1672664 + -22.8  -2.94925   CGCGGCCTAGCCCTG     CGCCCCGGCGCGTGCG TCA TGGGCGCGCCGGGGCG     TGTCTGATAGAGTCT 100 31
CWR61_RS08125 1673735 .. 1673779 +  -9.9  -3.24924   CCACCCCCAGCGCGC CGCGCACCGCGTGGTTGCCC ACCACC GAGTAGCCGCGCGC-GCGCG TGTTCTCGATCAGGC  60 197
CWR61_RS08135 1675511 .. 1675538 + -16.4  -4.56775   CGCGTCCCGAGAGCG        GAGAAGACGCCC GTGA GGGCGTCTTTTC         TTTTTGGAGGACGGT 100 47
CWR61_RS08145 1677488 .. 1677523 + -17.4  -2.81966   GCGGCCGCAGAGCCG    CGCCGGCGCGGGCGCG GGCG CGCGCCGTCACCGGCG     TGTCATGGCATTTCC  87 91
CWR61_RS08150 NONE
CWR61_RS08155 1680042 .. 1680095 +  -7.9  -3.21464   GGCGGCCTGGATCTA CGCCAAATGACACGGCGCCTGTCCC TGCG GGGACAGGCGCCTCATGACTGGGCC TTCAGTCTTCGTCTT  57 16
CWR61_RS08175 NONE
CWR61_RS08180 NONE
CWR61_RS08185 1685559 .. 1685606 +  -3.8  -2.63102   GCCTAGCGGCCGCGC GGGCTGGCCAGGCCAGCCCG CAGCGCGT CGCGCCGGCGCCGCCAGCCA TCATGTCCACCTCCT  41 35
        tilS 1686702 .. 1686724 +    -9  -3.28924   AAAATACTCAGCTTT           GCCCGCCCAG ACC CTATGCGGGC           TTGTCAGCCAGAGTA  59 39
CWR61_RS08195 NONE
CWR61_RS08200 1688198 .. 1688219 + -14.5  -5.27335   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTGCGCCG 100 37
CWR61_RS08205 1689446 .. 1689478 +  -9.8  -4.07246   CCGCTCCGCGGCCCG     GGTGGCTGAGCCGCG CCCG CGCAG-TCCGCCACC      TTTCGTTTCCAGTCC  75 17
CWR61_RS08210 1690664 .. 1690675 +  -4.4  -3.01712   GCTATGTCGTGAAGT                TCTG AAAA CAGA                 TATTCAACGGAGGAG  44 21
CWR61_RS08215 1691690 .. 1691720 + -13.3  -3.88787   AACCGCGCCGGCGCC      GTCCGCTCCCGCCG CGCG CGGCGGGAGCC-AC       TTTATGCCGATATGA  86 45
CWR61_RS08220 1692444 .. 1692459 +  -7.6  -4.09739   AATAACGGGTCTGTC              CTGACA TAAT TGTCAG               TTTTCCGGGAATTCC  71 36
CWR61_RS08225 NONE
CWR61_RS08230 NONE
CWR61_RS08235 NONE
CWR61_RS08240 NONE
CWR61_RS08245 NONE
CWR61_RS08250 1697129 .. 1697167 +  -4.3  -2.74144   CTGGTTGAAATCGAA   GCGGCCCGCGCGGCC AAGTGAGCC GGCCGCGCATGACGG   ATTTCACCGTAAGCC  42 5
CWR61_RS08255 NONE
CWR61_RS08260 NONE
CWR61_RS08265 NONE
CWR61_RS08270 1700661 .. 1700699 +  -2.3  -3.34895   GGCATAACGGTGGCC  GGCCGGCGCCACGCA-CAC CAC GTGCTGCA-GGCCCAGGTC  TTCATTGAGGGTGGA  45 423
CWR61_RS08280 NONE
CWR61_RS08285 NONE
CWR61_RS08290 1704933 .. 1704955 +  -5.5  -2.70932   TCTCTGTTCGGTGCG           CCATGAGCG TGCGT CCCTCGTGG           TGGTTCGCCGCGGCG  46 20
CWR61_RS08295 NONE
CWR61_RS08300 1706850 .. 1706866 +  -6.5  -4.09685   CCCCGGCGGGCGAGG              CGGGC CGAGGTC GCCCG              TTTTACAACCTCGAA  68 49
CWR61_RS08305 1707045 .. 1707072 + -18.6  -5.51402   GCAAGCAGTACCGAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTTTTTTGCGTCTGT 100 82
CWR61_RS08350 NONE
CWR61_RS08355 1715820 .. 1715875 +  -7.6  -3.23216   GCGGCGGCGGCCGCG GCCGGCTCGATCGTCGCCGG-CA-CGT ACCAG GCGCTGACCTG-GACGATGGCGCCGGC TTCGTCATGGTCGAC  53 229
CWR61_RS08380 1722041 .. 1722051 +  -4.6  -3.53091   GTACCGGCGCACCCG                 TCGC CGC GCGG                 TTTGAAAACACGGCT  53 10
CWR61_RS08385 1722194 .. 1722218 + -17.2  -4.98531   GCGCCAATATGAAAA          GCCGCCATGC CTTGC GCATGGCGGC          TTTTTGCTTTGCGGC 100 35
CWR61_RS08390 1723015 .. 1723050 +  -2.7  -4.10657   TCAATGATTTTGTGT    GGATATTCGGGTATTC CCGTA GAA-ATTCGAATAGCC    TTTTCAACGATGTGG  58 160
CWR61_RS08395 1724435 .. 1724473 +  -8.8  -2.96873   TGTCCGTGTCGCGGA  CGCGCCGTCGCGGGCGG GGTGCA TCGT-CGCGACGATGCG   TGATTTCCTAGAGGT  56 54
CWR61_RS08400 NONE
CWR61_RS08405 NONE
CWR61_RS08410 1728109 .. 1728136 + -17.8  -3.01924   CTTGACCGCCAAGAC        GGTGTCTGTCCC GGTT GGGACAGGCACC         TGTTGCGGGCGGCTC  88 150
CWR61_RS08430 NONE
CWR61_RS08435 NONE
CWR61_RS08440 NONE
CWR61_RS08445 1736580 .. 1736620 +  -9.7  -2.68823   GCGCGCGCCGACGGC CGGG-G-CGCGGCCGGC-GC CGGG GCAGCCGGGCGCGGCGTCCG ATTATGTGCCGGCCA  56 279
CWR61_RS08455 1740683 .. 1740693 +  -6.8  -3.15249   CGCAGGTCGTAGGCC                 GCCA GGG TGGC                 TTCGTAGCCGGTGTC  50 517
CWR61_RS08515 NONE
CWR61_RS08520 1758937 .. 1758976 + -12.6  -3.53091   CACACGGTGCAATGC  GGCGACCGCCGCTGGCGC GCCT GAGCCGGCGACGGCCACC   TTTCGCGCGCAACCT  75 70
CWR61_RS08525 NONE
CWR61_RS08530 1762111 .. 1762125 +  -3.4  -3.90358   GCACGGCATCATCAA               CGAGGC TAC GCCATG               TTTCATCTGTCCTGT  56 131
CWR61_RS08535 NONE
CWR61_RS08540 NONE
CWR61_RS08545 1765261 .. 1765271 +  -3.2  -2.87132   GCCGAGGTGGTGTCC                 TAGG GTG CCTG                 TCTCTGCGGGGACAG  41 23
CWR61_RS08565 1770853 .. 1770905 +  -7.5  -3.20941   CGCAGCGCAGCCGCG CCTAGCCAGGCGCCAGCGCCGCCG CCAGCC CGGCCGCGTTG-CGCATGCCCTGG TCTTCGTAATTGGTG  57 21
CWR61_RS08575 1773924 .. 1773952 +  -4.5  -2.80816   GTGCGCGGGCTGTTC       TCGTAGCG-GCC ACGCCG GGCGCGCGACGG        TATCATAGGTGCCCA  43 20
CWR61_RS08580 NONE
CWR61_RS08585 1775750 .. 1775769 +  -4.2    -3.889   ATACGGGCATCCCGG            GGTATGGCG GCT CGCCG-GCC            TTTGCTATCCTTGCG  58 62
CWR61_RS08590 NONE
CWR61_RS08595 NONE
CWR61_RS08600 NONE
CWR61_RS08605 1782301 .. 1782333 +  -8.4  -3.04461   AGGCACGCCTCGCCG     CGGATGTCAGCTCCC GTCC GGGGGCAGATA-CCG      TCTTGCCGGTCAATC  57 163
CWR61_RS08625 1787885 .. 1787914 +  -5.5  -3.55801   GGAATCCCGCCGCCC       CGGCGGCGGGACG CAAG CGTGGCGTCGCGG        TTTGACGCCGTTGAT  55 42
CWR61_RS08630 NONE
CWR61_RS08635 NONE
CWR61_RS08640 NONE
CWR61_RS08645 NONE
        cpaB 1790539 .. 1790553 +  -3.5  -3.01712   GTGCGCGGCGGCGAC               GTGCA AGCGG TGCGC               TATTGACGAACAGCA  42 5
CWR61_RS08655 NONE
CWR61_RS08660 NONE
CWR61_RS08665 NONE
CWR61_RS08670 NONE
CWR61_RS08675 NONE
CWR61_RS08680 NONE
CWR61_RS08685 1797875 .. 1797888 +  -3.7  -2.91383   GCTCGGGCGGCGGCG               GGGGC TGAG GCGCC                TGTGTCCATGAACGT  43 18
CWR61_RS08690 NONE
CWR61_RS08695 1801588 .. 1801599 +  -2.2  -2.90571   GTTTTACGAAACCGC                GCGA TAAG TTGC                 TATAGTTGAAAGATT  40 58
CWR61_RS08700 1802366 .. 1802391 +  -7.4  -3.95435   CCGCCGCGCCCGATG         GCGGGGCGGC GCATCG GCGGCCACGC          TTGTATTTTCGCCGG  70 64
CWR61_RS08705 NONE
CWR61_RS08710 1803724 .. 1803751 + -11.3  -3.05384   GGTCCGACGCCGGTT       C-GCCGGCGCCGC GGCC GCGG-GCCGGCAG        TTCCGTCCAGCCCGG  66 105
CWR61_RS08715 1804336 .. 1804348 +  -2.6  -3.29471   GCTGGGCGAGCCCCC                GGTC CCTTC GGCC                TTCGTATCATGAGCG  44 1
CWR61_RS08720 1804972 .. 1804991 + -16.4  -4.27316   GGCGTAAAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTTCGGTTGCGCCC 100 230
CWR61_RS08740 1809223 .. 1809233 +  -2.4  -2.90075   CAGGGCGGCATCCAG                 CGCC AGC GTCG                 TCTGATTGAACACCG  40 249
CWR61_RS08750 1811170 .. 1811185 +  -4.6  -2.77899   GAACACCACCGAAGA              CGTGCC TTGC GCCACG               TACTTCATGGCGGCG  43 496
CWR61_RS08765 1816893 .. 1816915 + -11.3  -3.06696   GCAATGCCTGCCAGG           TGCGGGACG GGTCG CGTCCTGCA           TATCTTGAAACGCAA  66 133
CWR61_RS08770 1817858 .. 1817880 + -11.2  -3.79906   ACTGTGCAACGGCCT           GGGCCCGTCG CAG CGACAGGTCC           TTGTTATAGGACTCC  74 201
CWR61_RS08790 NONE
CWR61_RS08795 1822729 .. 1822751 +  -4.1  -4.32034   ACAACGACGAAAGCG          GGCGCTG-AG CCGC CTACAGCACC           TTTTGCTCGTGGTGG  66 18
CWR61_RS08805 1823450 .. 1823468 +  -4.4  -3.64487   GGGCGACCAGGCCAG             CCAGCCGG TGC CCGACTGA             TTCTTCCCACTCTCC  53 7
CWR61_RS08810 NONE
CWR61_RS08815 1825527 .. 1825573 +  -7.2  -3.55444   ACAAAGGGGAGCCAG GCGGCGG-TC-CGCCTGCCGGT CGGAA ATCGGCGAGCGTGTTCCGTCGC TTTACGGAATCGGAG  57 339
CWR61_RS08820 NONE
CWR61_RS08825 1826760 .. 1826796 + -10.1  -2.70932   GCGCAACAGCATCGT    GCTGGGCGGCGCC ATGTCCAGGCC GGCGTCGGCCAGC    TGCTTCAGGACGCGG  56 118
CWR61_RS08840 1831888 .. 1831938 + -11.8  -2.70932   GCGGCCCGGCGCGTG GCCTGAATGCGCGGCG-GGC-CCCC ATGC GGGGAGCCGCGCCG-GCAAGCCGGC TGGTTCAGCGCGCGG  65 20
CWR61_RS08855 1834516 .. 1834556 + -12.5  -3.53761   TATATAAGGGACGTC CACGCCTTGCG-GCCCCGG CATCC CCGGGGCGCGCC-GGCGGG TTTGCCAGGGCCTTA  75 117
CWR61_RS08860 1836874 .. 1836895 +  -2.9  -2.91912   ATCGGTGGCTGCTGA           TCCGAGAGA GAGG TTTCGCGGG            TCTGTAGCTCAGTCG  42 102
CWR61_RS08865 NONE
CWR61_RS08870 1837120 .. 1837158 +  -5.3  -4.07568   CCAGGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 80
CWR61_RS08875 1840382 .. 1840392 +  -6.8  -3.65314   AACCGACTGCCGGGC                 GCAC GCT GTGC                 TTCTTCCAGATTCAA  59 127
         rrf 1840567 .. 1840601 + -19.5  -4.56597   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAC GGCTCGCGGGGTTTTG     TTTTTGGGGGGACGC 100 36
CWR61_RS08900 1845068 .. 1845082 +    -7  -3.27298   CGGCCGGTGCTGCAG               CAGCGG GTG CCGCAG               TTCCTCGTTGGCGCG  55 299
CWR61_RS08945 1853523 .. 1853553 +  -5.3  -3.30771   GCCGTGCGAGGGGGG      C-GCGGCGATGCGC GCGG GCGCGTCGAAGCCG       TTGTGGACGATGTGC  51 160
CWR61_RS08950 1855951 .. 1855964 +  -5.9  -3.82824   GCAGGTCGGCCAGGA               CGGCG TCGA TGCCG                TTCTTGTCGATCGTG  63 410
CWR61_RS08970 1859140 .. 1859188 + -16.5  -2.99871   CAGGCAACGCCCGCT AGGGCGGCCGCCGGTCCTGGCGC CAT GCGCAGGGACTGGCGGCTGCAAA TCATTTCATCTCAAA  85 24
CWR61_RS08975 1860715 .. 1860727 +  -4.7  -2.71712   GTCGCCGGCCCCGTA                CGCCG GAG CGGCC                CTTTCCCCGGCCGCG  44 146
CWR61_RS08980 NONE
CWR61_RS08985 1862930 .. 1862949 + -11.4  -4.88067   CGATATGATGGCAGA            CGGTCACC ACGG GGTGGCCG             TTTTTCTCAATCGCT 100 71
CWR61_RS08990 1863360 .. 1863375 +  -6.8  -2.83112   GGCCGCTGAGGCATG              CCG-CGC CCG GCGGCGG              TATGATCGATTGCAT  49 32
CWR61_RS08995 1864673 .. 1864700 +  -2.5  -3.01712   GGGCAAGGGTGTGAG        GGCGCAGTGGC TACAAT GCCGCGATGCC         TATTCGCCACACCCC  41 91
CWR61_RS09000 NONE
CWR61_RS09005 1866369 .. 1866388 + -16.4  -2.72379   AGCGGCCGATGCATC            GGCCGGCG AAAG CGCCGGCC             TCATTGCCCGGTTGG  81 53
CWR61_RS09010 NONE
CWR61_RS09015 1868398 .. 1868414 +  -2.1  -2.98719   CCGGAGACTAGACAA              GGTGAGC AAC GCCAACC              TGTATGCTGTGCTGG  41 30
CWR61_RS09020 NONE
CWR61_RS09025 1871136 .. 1871159 + -13.8    -4.015   TGAGGGACGAAAGGG          GAGCGGCGCC GGCC GGCGCGGCTC           TTCTTTCATCGCTGG  93 53
CWR61_RS09030 1871784 .. 1871803 +  -5.6  -3.32343   GTGAAGTAAGGGTTG            C-GCCGTCC CGC GGCCGGCCG            TTCTAGGGATATCCC  53 32
CWR61_RS09035 1872918 .. 1872949 + -20.8  -2.71712   TCAAGTAATCGCGTA      TTCGGCCGGGCGCC ACGC GGCGCCCGGCCGGC       ATTTCCACCGAACAC 100 33
CWR61_RS09040 NONE
CWR61_RS09045 1874942 .. 1874985 + -10.9  -3.14344   GGTTGCGCGCCGACA GGCGCAGGCCG-G-GGCCGGG CAGG CCCAGCAGCACCGCCTGCGCC TTGATCAGGGCGATG  64 261
CWR61_RS09055 NONE
CWR61_RS09060 1877757 .. 1877773 +  -2.1  -4.62069   GCGCGCTTTTACCTC              CGTGAGG AAT CCATGCG              TTTTTCGCCTCAGCG  70 350
CWR61_RS09065 1879000 .. 1879031 +   -15  -4.26076   GCCAGCAGTCGTAAG      CGGCGCGCGGCGCC CGAC GGCGCCGCGTTCCC       TTTTCGTGAGCATCG 100 27
CWR61_RS09070 NONE
CWR61_RS09075 NONE
CWR61_RS09080 1884514 .. 1884555 + -12.1  -2.56271   CAGGCGCGCCTGGCG GCCGTGCGCGGCCACGCCTG AAG CAGG-GCGGGAGCGCCCGGC GTATTATCATCACGA  64 5
CWR61_RS09085 NONE
CWR61_RS09090 NONE
        uvrC NONE
        pgsA 1888700 .. 1888720 + -10.4  -3.09516   TCTGGAGACCGCGAA           GCGCCGCCG CCAT CGGC-GCGC            TTCGCTCCTGCCCCC  63 141
CWR61_RS09105 1890016 .. 1890047 + -15.8  -3.61764   TGAACGCGGCTACTG      GCGCGCCGTGCGGAC GTC GGCCG-GCGGCGCGC      TTTCGAAGTTGCTGC  90 38
        aceA 1892534 .. 1892553 +   -15  -5.40072   TTGCAGGGTGGATTT            GGGGCGTC CTCG GACGCCCC             TTTTTTTGCCGCCGG 100 86
CWR61_RS09120 NONE
CWR61_RS09150 1899319 .. 1899333 +    -7   -3.2794   CCCTAGACCCCTGGC               GCCAGG CGC CCCGGC               TTGATCTGCATCAAG  54 35
CWR61_RS09155 1900334 .. 1900360 +  -5.7  -2.71416   CGCCGCACCGGCCGC         CGCCGTGGCGC AACCC GCGCCATGACC         ATTCTCTACCTGCTG  46 1
        ccoS 1900519 .. 1900535 +  -3.5  -2.71144   GCGCGGGCCCCGCAA              GCAGGCG GAA CGACGGC              TGCTTGACGCAAATC  40 46
        ccoN NONE
        ccoO NONE
CWR61_RS09175 NONE
        ccoP NONE
        ccoG NONE
CWR61_RS09190 NONE
CWR61_RS09195 1906037 .. 1906072 +  -7.4  -2.81312   GCCCGGTAAGATCGC    CGCCTGCCATCACGTT GAAC AAGGGGGCGGCGGGCG     TATCGTGGATGCATT  52 83
CWR61_RS09200 NONE
CWR61_RS09205 1907358 .. 1907373 +  -2.4  -3.28712   GTGACGCATAATCCG              CCGCGG CCGA CTGCAG               TTGTCGGCGCGGCCG  44 30
CWR61_RS09210 NONE
CWR61_RS09215 1909584 .. 1909611 +  -6.2  -3.01712   GGCGCGGATGGTGGC        GGCCGTC-AGCTG CGC CAGCGCGACGCCC        TGTTCGGGGCCGGCG  48 476
CWR61_RS09235 1914895 .. 1914909 +    -7  -4.59773   GGCGGGGAGGAGAAG               GGGCGC TAT GCGCCG               TTTTTCAGGATCGCG  82 104
CWR61_RS09245 1915679 .. 1915690 +  -7.2  -2.70932   CGTCGAATTGAAGGG                GCCG CCCA CGGC                 TGCTTGAACCCGCGG  48 7
CWR61_RS09290 1923779 .. 1923795 +  -3.5  -3.54951   GGCGGACCGGCCTCG              AGCCCGC GTG GCGCGCC              TTGTCTCGTCCAGTC  49 139
CWR61_RS09295 1924706 .. 1924722 +  -5.7  -2.79501   GACGCACAGGCATAG              CGCCGCG GCG CATGGCG              TATCCTAGGGATATG  47 26
CWR61_RS09300 1924983 .. 1925024 +  -2.1  -4.08216   TGCTCGGCCAGGGGG CC-GCTGGGCAGGCTGCCGT CCT GCGACATCATGGTCAGCTGG TTTTCGCCGACCTGG  58 73
CWR61_RS09310 NONE
CWR61_RS09315 1926966 .. 1926980 +  -4.9  -3.70751   GGCCGGTGCGGCGCC               GGCCG GCGTG CGGTC               TTGTTGCCCTTGTTG  58 44
CWR61_RS09320 NONE
CWR61_RS09325 1927678 .. 1927701 +    -3  -4.07568   CTGATCCTGGGCGCC          GCGCCGGC GATGGTAA GCTGGCCC           TTTTCCGCGCGGCCG  60 37
CWR61_RS09330 NONE
CWR61_RS09335 1928865 .. 1928885 +  -6.1  -3.14344   CACCGACTTGGGCAG           GCGCGGCG CCAGCA CGCCG-GC            TTCGTAGCGCCAGTA  50 219
        clpB 1933546 .. 1933569 + -13.2  -5.47159   CGCCCGGTCTCCCAA          CCCCTGGCTCC ATT GGA-CCAGGGG          TTTTTTCTGTTCGCG 100 69
CWR61_RS09355 1936083 .. 1936118 + -13.3  -3.48593   TATTTGAGGGTATCG    ACCCGATG-GCCGCGC ACCAG GCGCGGCGTATCGGGG    TTATGTCCGGCGCTG  76 445
CWR61_RS09365 NONE
CWR61_RS09370 1938764 .. 1938784 +  -3.2   -3.1994   GGATGTGCAAGCAGG           CGG-CTACG GCCG CGGAGACCG            TTCATGAGTCATCTG  45 69
CWR61_RS09375 1939487 .. 1939524 +  -6.4  -3.14132   GCCACGCCCAGGCCC  GCCTTGACCAGCGCCGCCT GCG AGGTGGTGCTGG--A-GGC  TTCGTAGAACGGCGC  50 272
CWR61_RS09385 1941750 .. 1941771 + -14.4  -5.14965   GGCCAGGTACTGCGC           GCCGGCGC CTGAGC GCGCCGGC            TTTTTTCCTACGCAT 100 14
CWR61_RS09390 1943104 .. 1943134 +  -8.9  -3.14132   GCCGAACACCAGCCA      GTTGCGTCCGTGGC CGGC GCCGCGG-CGCGCC       TTGATGAGGGCGCGC  56 362
CWR61_RS09420 NONE
CWR61_RS09425 1949109 .. 1949120 +  -7.2  -3.88291   ACATGTTTCCAGGGC                CCGC CTGG GCGG                 TTTGTCGCGGTACTC  64 77
CWR61_RS09430 NONE
        crcB 1950257 .. 1950309 +  -3.9  -4.07687   CCAGCGAGCGCCATG GCGTGCTG-TTCAGCGGCCGCGCC AGGCCG GGCACGGCGGCGAAGGTGGCGCGC TTTTCCACGAACAGT  60 177
         alr 1954422 .. 1954445 + -11.6  -2.56596   GAGCATTGTGCGGAT          CGCCGGCGGG CCGG CCCGCTGGCA           TGAATTGCTACGCAA  62 39
CWR61_RS09460 1955469 .. 1955491 +  -5.5  -4.45399   AGGCCGGCTCGTCGC          GCTGGC-GCG CTGA CGCCGCCAGG           TTTTCCTGTTGCTGT  72 218
        radA NONE
CWR61_RS09485 NONE
CWR61_RS09490 1961328 .. 1961349 +  -2.1  -3.53012   CACCCGCCCAGCAGG           CCGACGCCGC CCA GCGCCA-CGG           TTTGCAGCACCAGCG  47 289
CWR61_RS09525 NONE
CWR61_RS09530 NONE
        maiA 1969308 .. 1969329 + -17.3  -5.31275   CGCGCCCAAGCAAAA           GGGCAGCCC TGAT GGGCTGCCC            TTTTTTCTGGTGCCG 100 44
CWR61_RS09545 1969711 .. 1969732 + -12.3  -4.74103   CGTCGACACGAAAGG           GCCGTTCAC GCTA GTGAGCGGC            TTTTTGCATTGCGCG 100 78
CWR61_RS09555 1971793 .. 1971807 +  -4.9  -4.14392   ACGATCACCGTCACG               GGCGC GGCCA GCGTC               TTTTCCAGGTTGCCG  66 427
CWR61_RS09565 1973126 .. 1973152 + -12.2  -3.85698   ATCAAAACATTACAT         CCGGCCTGGCGT GCG ACGCCAAACCGG         TTTGTCCGGGCGGGC  81 92
        scpB NONE
CWR61_RS09580 1977308 .. 1977327 +  -9.3  -5.83822   GGCCAGGCAATACGG            TGGGCTG GGCGTG CAGCCCA             TTTTTTTTGAGTGTA 100 450
        rimP NONE
        nusA NONE
CWR61_RS09595 NONE
        rbfA 1982804 .. 1982833 +    -5  -2.63365   CGTTCCCGACGAGCC       CGAAGACCAGTCC TGACC GGGCTG-TCGTCG       CTGCTTTTTCTCTTT  43 10
        truB NONE
        typA 1985477 .. 1985503 + -22.4  -4.65895   CCATGCCTGGCGCAA         GGGTTGTGGCCG TGG CGGCCACAACCC         TTTTTACATGCAGCC 100 67
        polA 1990231 .. 1990244 +  -2.3  -4.35524   CCGGCCGGTTGCGAA               TTGCC TGAC GGCCA                TTTTCGATTTGGCGC  65 65
CWR61_RS09635 1991153 .. 1991170 +    -4  -3.03151   CATTGACCGCGGCGC             GGCGGC AGGAGG GCGGCC              ATTTCCTTTCCACGC  44 35
CWR61_RS09640 1991994 .. 1992019 + -16.9  -2.52676   ATCTGTAGCGGACCG         GGGCCTGC-CGG TCT CCGGGCAGGCCC         TCAGTTGCCCGCGTC  80 33
CWR61_RS09650 1995390 .. 1995442 +    -4   -4.8048   ACAGGCATGCCGGGG GTGGAGTTTGCGGGTGCCAGTCCCC CTGC GGGGACAGGCACCCG-GGGTTAGAG TTTTTCCTCTACCCC  78 175
CWR61_RS09665 2002699 .. 2002716 +  -6.9  -4.25016   CGGGGGGCGGGACAG             GCATGGC GCGG GCCAGGC              TTATTTCTTCATCAT  72 74
CWR61_RS09680 NONE
CWR61_RS09685 NONE
        parC 2009584 .. 2009599 +  -2.4  -3.22475   GTGCGTCCCAAGCAG              CCTGTG CTTT CGCCGG               TGTTCTGAACGTGAC  44 2
CWR61_RS09695 2010940 .. 2010952 +  -3.3  -3.61398   GCACGCGCAGCTCGA                GGATG TCC CAGCC                TTGTTCCCAGCCGGC  51 144
CWR61_RS09720 2017765 .. 2017776 +  -7.2  -2.54634   TACTGGCGGCGCGCC                CCCG GAAT CGGG                 ATTGGTAGTATGAGA  47 1
CWR61_RS09725 2018417 .. 2018428 +  -7.2  -2.92921   AAAGCGGCAGCAGGC                CGGC GCTG GCCG                 TCTGTCAACTTATAT  50 96
        ectB NONE
CWR61_RS09735 NONE
        thpD 2021142 .. 2021161 + -12.1  -5.60993   TGCGTTTGGCTTGAG            CCCCGCG AACCCC CGCGGGG             TTTTTTTATGCCCGC 100 66
CWR61_RS09745 NONE
CWR61_RS09750 NONE
        pdxA NONE
CWR61_RS09760 2025585 .. 2025609 +  -2.8  -3.47078   CATTTCGCACCGGCT          GGCGCCAA CTGCTATTC TTGACGCC          TTCTCCTGTCAGGTC  49 52
CWR61_RS09765 2026608 .. 2026628 +  -4.7  -3.31232   GAGCACGCTTGCGCG           GTCC-GGC CCGCGC GCCAGGAC            ATTTTCTATGCAACG  51 128
CWR61_RS09770 2027013 .. 2027040 + -10.5  -2.55253   GGCCTGACGGCCGTT        GCGCGCGCGCCC GGGCA GGGCGC-CGCGG        TCACTTCCGATTCGT  58 34
CWR61_RS09775 2028133 .. 2028175 + -13.5  -5.59357   AGCGCGGCAAGCACG GGGCGGCATCC-CT-GCACGC GGC GCGTGCAAATGGATACCGCCC TTTTTTTAATGTCAT 100 50
CWR61_RS09780 NONE
CWR61_RS09785 2030926 .. 2030942 + -15.1  -5.76949   GGCGCCGCAACAGAA              CCGGGCC GCT GGCCCGG              TTTTTTTTGGGCGTA 100 48
CWR61_RS09795 NONE
CWR61_RS09800 2033952 .. 2033964 +  -6.2  -3.30124   TTCGCCCGGCTGAAG                GCGG TCAGT CCGC                TTATAACAACTCAAC  53 28
CWR61_RS09805 2035561 .. 2035618 + -6.69999  -3.65827   TATTCTGGGGAATAT CCAAGAACTGAGTCGCCGCGCGGCGCCG CCA CGGCGCCGCGCAGC-ACGTAGGAGGTCG TTTCCGTGCAAATTC  59 15
CWR61_RS09810 NONE
CWR61_RS09815 NONE
CWR61_RS09820 NONE
CWR61_RS09825 2040412 .. 2040430 + -17.4  -5.22312   GCGCGGCGCGCCGCG             GGCCGGCC GCC GGCCGGCC             TTTTTTCGTGTCCGT 100 42
CWR61_RS09830 NONE
CWR61_RS09835 NONE
CWR61_RS09840 NONE
CWR61_RS09845 NONE
CWR61_RS09850 NONE
CWR61_RS09855 2047459 .. 2047484 +  -7.4  -4.15044   ACTGGTCAGTTTCTA         CGCCAGCCAG TAAAGC CCGGCAGGCG          TTTCTTCAAGCAGGA  71 13
CWR61_RS09860 NONE
CWR61_RS09865 2048942 .. 2048960 +  -6.7  -2.94218   TAGGGCGGCGGCGCT            GGCATCGG CCTG CCGA-GCC             TCTATAATCAAAAAT  50 38
        alaS NONE
CWR61_RS09875 2051886 .. 2051905 + -16.4  -3.64703   CCGCCGGCAGGCAAA            CGGCCCGC GCAA GCGGGCCG             TTTGCGTAGGCGGGC  91 45
CWR61_RS09885 2053188 .. 2053214 + -15.2   -3.8709   GCGCCCGCATTTCTT         GAAAGCGCTGCC TGG GTCAGCGCTTTC         TTTGTCCGCAACTTT  91 135
        rimM NONE
        trmD 2055015 .. 2055027 +  -9.1  -4.08216   GGCCAGGCCGCAGCG                CAGCG CCG CGCTG                TTTTCGGCCGACTCG  72 400
CWR61_RS09920 2059368 .. 2059388 + -13.9  -4.74103   GCGTGGGCAAGAAGA            ACCCCCGGC CGT GCCGGGGGC            TTTTTGCGTTCAGGC 100 74
CWR61_RS09930 NONE
        rlmN NONE
CWR61_RS09940 NONE
CWR61_RS09945 NONE
CWR61_RS09950 NONE
CWR61_RS09955 NONE
        bamB NONE
         der NONE
CWR61_RS09970 2071594 .. 2071610 +  -2.3  -3.28924   CCTTGATCAGCGCGC              TGAAGAA AAT TTTTTCG              TTGTGACGCGCACTG  44 3
CWR61_RS09975 2072019 .. 2072048 + -17.2  -4.36595   AGCATTACCCTTGAT       TGCCCGCC-GCGC GGCCA GCGCCGGCGGGCA       TTTTCGCTTTGGCTC 100 74
        hflX NONE
        hflK NONE
        hflC 2075469 .. 2075498 + -17.1  -4.98531   GAAAACATTCCGCAA       CGGCTGAGCGGGC TTAC GCCCTCTCGGCCG        TTTTTCGTTTGGGCA 100 121
CWR61_RS09995 2076764 .. 2076774 +  -6.8  -2.55896   GATTTCCGGATTTCC                 CGAG AAA CTCG                 ATATTGATTCGTAAA  47 76
CWR61_RS10000 2078090 .. 2078123 + -18.1   -3.9461   TCAAGGGTTAGGGCG     CCGCGGGCCGCGCCCC GTT GTGGCGCGGCCT-CGG     TTATTATTCGCCAGG 100 30
CWR61_RS10005 2078754 .. 2078801 + -10.4  -2.80016   AAAACGGCCCGGTCG GGCCG-CCTGGCCAGGGCCCGCC ACG GGCTGCCCCTGGTCAGAATGGCG TCATTCGTGCTAGAA  60 41
CWR61_RS10010 2079233 .. 2079262 +  -6.5  -3.16055   GCCTGTATTGATGCC       TGATTCCCGAATC TATT GATTCCAGAATCA        TTCATCCAGGATTTG  51 30
CWR61_RS10015 2081487 .. 2081532 +  -5.4  -4.24002   ACGCACGGTGCGCAG GGTCATG-GCGGGTGGCGGCAT TCAT GTGCCGG-GCCGGCGCATGGCC TTTTGCGGTTTGCGG  68 234
        rpoD NONE
CWR61_RS10025 2084354 .. 2084375 + -15.9  -5.27023   GTATTCAGGCATTCA           CAGCCGCCA GCAA TGGCGGCTG            TTTTCTTTTTCGCGT 100 52
CWR61_RS10030 2085195 .. 2085216 + -13.7  -4.66537   GTGCAAGTCCTTCCG           CAGCCGCCG GCAA TGGCGGCTG            TTTTCTCTTCCGGCG 100 449
CWR61_RS10040 2086276 .. 2086289 +  -4.5  -3.14132   AGATGTAGATGCGCA               GCATG ATGA CGTGC                TTCATCGCGGCGCCG  45 408
CWR61_RS10050 2088092 .. 2088108 + -10.1  -3.01712   CGCGCTGCTTGGCGA              TCAGCGC CTT GCGCTGG              TCTTCGGGCAGGGCG  59 231
CWR61_RS10085 NONE
CWR61_RS10090 NONE
CWR61_RS10095 NONE
CWR61_RS10100 2096923 .. 2096936 +  -2.4  -4.25658   CACGACGGGAACGCC               TCGT ATGACA ACGA                TTATTTTCATCACCT  63 43
CWR61_RS10105 NONE
CWR61_RS10110 2098718 .. 2098739 + -17.3  -3.01712   GTGGCGCCCCAGGTA           GCTGCGCGC CATC GCGCGCAGC            TGTTGCGGCCGGGAG  82 333
CWR61_RS10140 NONE
CWR61_RS10145 2108004 .. 2108018 +  -8.5  -4.26881   AGCCAAGGTCGACTA               GCCGC CGGGC GCGGC               TTTCCTTTTCTGCCG  77 25
CWR61_RS10150 NONE
CWR61_RS10155 NONE
CWR61_RS10160 NONE
CWR61_RS10165 2113661 .. 2113675 +  -3.5  -3.60792   TCCCCGTCTCCTCGG              GC-CGC TGAA GCGCGC               TTTCGACATTCAACC  51 18
CWR61_RS10170 2114868 .. 2114881 +  -4.5  -3.72576   GCCCAAGTCCTATTA               G-GGCC CGC GGCCGC               TTTGCTCACGGCCCG  56 25
CWR61_RS10185 2117439 .. 2117471 +  -7.6  -3.41051   CTGACTCGGAACGCC     CGGCGCGTGCG-CGG CATG CCGGCGTGTGCGCGG      TTGTCGTCGCCGTAC  58 37
CWR61_RS10200 NONE
CWR61_RS10205 NONE
CWR61_RS10210 NONE
CWR61_RS10220 2124988 .. 2125013 +  -5.3  -2.82623   CCGCGCCGGTCCAGT         CGATGCGGTCC TGCA GGAACGCGTGG          TAGTTCTGGCCGAGC  44 252
CWR61_RS10245 2130002 .. 2130015 +  -2.3  -2.83012   GATATCGGGATAAGT               GGCCA TGCG TGGCA                TCTGATCCTCGAATT  40 78
CWR61_RS10250 2131811 .. 2131839 + -18.2  -4.13767   CCGCTTGCCTCCACA       CGCGGGCAGGGCA GTCA TGCCC-GCCCGCG        TTTTGCCGTGCCCGC 100 69
CWR61_RS10255 2133547 .. 2133572 +  -5.9  -2.85351   TCTACTTCGGCTGAC         CCGCCGCGCCG CGCG CGCCGCCGCCG          TCTGCTATAAGGCAG  47 27
CWR61_RS10260 2135034 .. 2135049 +  -6.8  -3.37499   CTTCGTATTCGCAGC              GCGCGCG CGC CGC-CGC              TTCCTTGGAGTATTG  55 474
CWR61_RS10275 2137519 .. 2137540 +  -8.1  -3.40403   GTGCGATGGGTTTGT           TTCGCCT-CA GGT TGCAGGCGAA           TTCTGATCGCCGGGC  58 179
CWR61_RS10280 2139971 .. 2139999 + -13.2  -3.62522   GCGCGAATGGAAGAA       CGCCCCAG-CTCG CGGA TGAGTCTGGGGCG        TTCTTGCCGGCCTTC  81 84
CWR61_RS10285 2140507 .. 2140525 +  -6.7  -4.11216   CACCCGCCGACGTCG            CGCGTAGC AGCC GC-ACGCG             TTTTGCAAGTAACGG  68 138
CWR61_RS10290 2140849 .. 2140863 +  -2.7  -4.18494   TATCGTCGCGGTTGC               GCCGC CTGGA GCGCC               TTTTGCATGCGCGTC  58 107
CWR61_RS10295 2142072 .. 2142084 +  -6.3  -2.88544   CGAAATCCTTTACAA                TTTGG CTA CCAAA                TGTGTAGGAGTGGGC  47 92
CWR61_RS10300 2142328 .. 2142349 + -18.7  -3.84451   TTGAGGGGCGCGCGA           CGGGCGGCC GGCA GGCCGCCCG            TTTGCATTTCAGCCG  95 37
CWR61_RS10310 NONE
CWR61_RS10315 2145292 .. 2145317 + -11.7  -3.17075   CGCCGGCCTGATCCT         GCCGCGGCGCG TCGG CGCGCGCCGGC          TTAAGTTCCGGGCGC  66 30
CWR61_RS10320 2145707 .. 2145743 + -12.1  -3.14132   CACGCCATCGGCATC    CGGCCGTTCGTCGACCT GCA AGGCCGTCAGGCGGCCG    TTCCTGCACGGGCCG  68 94
CWR61_RS10335 NONE
CWR61_RS10340 2150347 .. 2150362 +  -7.5  -3.05844   GGCATTCTGGCGACG              GCGGC CAGCTC GCCGC               TCTTGCCGTCGACCA  52 469
CWR61_RS10355 2152433 .. 2152452 +    -7  -2.63073   GCTGCACGCGCGCGG            GCGCGCCG TCGC TGGGGCGC             ATATTGTTCAGGAAG  48 266
CWR61_RS10370 2157574 .. 2157596 +  -7.6  -3.64822   GCAGAAGGCGATCGA           CGCGCCGC GGCGCAG GCAGCGCG           TTTCGATGACCAGGT  60 132
CWR61_RS10380 2159499 .. 2159527 +  -2.9  -3.59738   GCCTTGGCGCGCATG        GCGTCCTTGACCG AGT CGGACAGGCGGGC        TTTGAGCGTATCGTG  50 463
CWR61_RS10390 NONE
CWR61_RS10395 2161390 .. 2161431 +  -4.4  -3.45571   GGCCGCGTAGGCCGG GCCGCGCCGGCGGCC--AACC TTA GGTTATGGCCGCTGCC-CGGA TTGCTATTTGGCGCG  51 31
CWR61_RS10400 2163034 .. 2163063 +  -3.4  -3.92324   GCCGTTCGATCAGCT       CGGGGCGCACCA CGGCAT TGATGGGCCCGG        TTTCGTCTTCGAGCG  58 270
CWR61_RS10420 2169177 .. 2169197 + -10.3  -3.70902   CGCGATCGAGCTGGC            GCGCGTAGG TGA CCAGCGCGC            TTTCCGTCTCGCGCA  71 256
CWR61_RS10455 NONE
CWR61_RS10460 2177123 .. 2177165 +  -5.5  -3.40403   CGCGAAAATGATGCT GGC-CAGGTTCTCGGCCGTG GGAA TGCGGTCGAGAACCACCGTC TTGTGGTCCGGCAGC  52 164
CWR61_RS10475 2178617 .. 2178654 +  -6.8  -3.53012   AACCAAGCGCCTGCG   CGGCAGGGTGCGCGAT GACTGA AGCGCGCGCCGGGCTG    TTTGCCCGCCGGCGC  57 4
CWR61_RS10480 NONE
CWR61_RS10485 2180207 .. 2180218 +  -7.2  -3.90112   CGCACACCGCGTAGC                CGCG TTCG CGCG                 TTTCGTTCAGCAGCA  67 429
CWR61_RS10495 NONE
CWR61_RS10500 2183296 .. 2183337 + -15.7  -2.52234   GCGCAGCGCCGCCCA GCGCAATGCTGCCGGCGGC CAGC GCCGCCGCCATCCATGCGC  GTTCATGACGTTTGT  69 479
CWR61_RS10515 2185513 .. 2185538 +  -7.6  -4.08767   GTGTCGACCACATCC         TGGGCCATCT TGCGGT AGGTGGTCCA          TTTTCCGCCGGTGAC  69 470
CWR61_RS10530 NONE
CWR61_RS10535 NONE
CWR61_RS10540 NONE
CWR61_RS10545 NONE
CWR61_RS10550 NONE
CWR61_RS10555 2194107 .. 2194140 +  -7.4  -2.78384   TAGCGCGGCGGCAGC     GGGTCCTGCAGCGAG CCGTA CTCGC-GCAGGAACG     TGTCGTGGAACAGGC  49 463
CWR61_RS10575 2197630 .. 2197647 + -14.1  -2.57564   CAACGCCGCCTGAGC             CGCCGGC GTGC GCCGGCG              CTTGTGCCACAATCC  70 28
CWR61_RS10580 NONE
CWR61_RS10585 2201463 .. 2201495 + -15.6  -2.53995   CGGGCGGGTGAGGCA     AGG-GCGCCTGTCCC CGCG GGGACAGGCGCGCCG      TCAGTTGAGCTGGAT  77 30
CWR61_RS10595 NONE
CWR61_RS10600 NONE
CWR61_RS10605 NONE
CWR61_RS10610 NONE
CWR61_RS10615 NONE
CWR61_RS10620 2208863 .. 2208903 +  -4.4  -3.70902   GTGTACCGCGCCCGG CGCGCGGACGACAGC-GCC TGAG GGCAGAGGGCGGCCGCGGG  TTTACGTGTGCCAGG  56 5
CWR61_RS10625 2209655 .. 2209667 +  -4.8  -3.60074   TTCAGGCAAAATGTC                GGCT GTCCG AGCC                TTTACGACCTTTATC  55 94
CWR61_RS10630 NONE
        tadA NONE
CWR61_RS10640 2212123 .. 2212148 +    -6  -4.15044   GCCGTCGGCGCTGGC         GCGCTGCTCG GCGATG CGGGCGGCGG          TTTCTTCCAGCAGGG  69 119
CWR61_RS10665 2218644 .. 2218681 + -16.2  -3.28924   CGAGGCCTAAGCAGG   GCGC-CCACGGGCGGCC CGGCC GGCCGCCCGCGACGCGC   TTATAACGCCAGGTA  86 31
CWR61_RS10670 NONE
CWR61_RS10675 NONE
CWR61_RS10680 2221438 .. 2221465 +    -4  -4.70613   GCGCGGGCCCCGCGC        CCGCGCCTTCAT CGCC ATGATCGCGCCG         TTTTCTTCCCGTTTT  75 46
CWR61_RS10685 2222313 .. 2222338 +  -6.8  -2.80935   GCTAAGCGGCGCGCA         CGGCGCCG CCACGTACAA TGGCGCCG          TATGATGCATACGCT  49 36
CWR61_RS10690 2222921 .. 2222952 + -11.7  -3.09492   CGGCTGGGACGTGCA     GGCCTGA-ACCG-GG CCCG CCGCGGTCTCAGGCC      TGTTCGCCTTCGCCG  66 19
        tsaD 2227234 .. 2227269 + -17.6  -2.62757   TGCGGGTTGGCAGTC    GGCAGGAGCCTGTCCC CGCC GGGACAGGCTCCTGAG     TGGGTTGCTTCTGTC  83 100
        surE NONE
CWR61_RS10725 NONE
CWR61_RS10730 NONE
CWR61_RS10735 NONE
CWR61_RS10740 2232006 .. 2232033 + -24.2  -3.64703   AACCCGCAGGGATGA        CGCCCCGGGGCT GCAA AGCCCCGGGGCG         TTTGCGTGGGCGCGC 100 49
CWR61_RS10745 2233028 .. 2233081 + -24.5  -2.73124   GCGGACCTTCTGAGG CGCCGCCCGGGACGGACGGCCCGCCC GGG GGCCGGGCCGTCCGTCC-GGACAGCC GTTTCCGGCATGGCC 100 28
        rlmD 2235003 .. 2235030 + -13.5  -3.24017   GACGGCTGGCCGGTT        GCG-CGCCTTCC CGCAT GGAAGGCGTCGC        TTCCATTCTACGCTT  74 483
CWR61_RS10760 2235372 .. 2235406 +  -8.2  -2.74019   GATTGCTTCAGGCTA     TCAATTGATTAGATTT ATT AAATTTGATTAATTGA     TAGTTAACGCTTATC  53 57
CWR61_RS10765 2236214 .. 2236234 + -19.7   -3.6215   CTGGCCTGATGCCTG            GCCGGCGGC GCT GCCGCCGGC            TTTCCCCTCCCTTCA 100 32
CWR61_RS10770 2237730 .. 2237773 +  -9.2  -3.31792   CGCCTGGGGCAGGCG CGCCCGCAGCGCCTGGCCGC CTGA GCGGCCCCGCGCATCAGGGG TTCTCGCGGTACTGC  64 2
CWR61_RS10785 2241681 .. 2241727 + -20.3  -4.87626   TCGGCCTGGAACATG GCCCGGTTGGTGGCGATTCCTT CCAT GAGGAA-CGGCACCAGCCGGGC TTTTTCCTGTTCGGC 100 116
CWR61_RS10795 2243296 .. 2243320 +  -7.7  -2.78384   GAGGTATAAGGATCG          TCGCCGGCCAC TTT GCGGGTGGCGA          TGTACTGGGCCGCGA  49 411
CWR61_RS10805 2244955 .. 2244983 + -11.5  -2.71731   CTGAAGAGAGGCCCG        CGCCCGGGAGCGG GCG CGGCGCCCTGGCG        TGCTTGCCGCGTCCG  62 95
CWR61_RS10810 2246314 .. 2246348 + -19.2  -4.56597   GCCCGCGCCATTGCT     GCACGCGCGCCGCGGC CCG GTCGCGGCGCGCCTGG     TTTTTCGCCACCGCG 100 61
CWR61_RS10815 NONE
CWR61_RS10820 2248301 .. 2248324 + -11.7  -3.73402   AATCGTCTGGAAACA          G-GCGCGGCC ATCGC GGCCGCGCGC          TTTACTGCAAGGTAT  77 39
CWR61_RS10825 2249032 .. 2249043 +  -7.2  -3.91911   GGAAATCGCCTGAGC                GGCC GGCG GGCC                 TTTCCTTAACCTCCA  64 28
CWR61_RS10830 NONE
CWR61_RS10835 2251371 .. 2251396 +  -4.1  -3.51232   CTATGGCGAGGCTGG         CAACGGTCATTT CCA ATATGAC-GTTG         TTCATTTCGCCAACG  51 106
CWR61_RS10840 2252745 .. 2252785 + -10.4  -3.07113   TCGTCCGTGGCTGTC GCCGCGGCCTGGG-GCA AGGGCGGC TGCGTCCGCGCCGCGGC  TTCGCTCAAGTGCTG  59 470
CWR61_RS10855 2267838 .. 2267857 + -13.6   -5.4756   TTGGACCTTACTCCA            GCCCATCC TTGC GGATGGGC             TTTTTTGTTGAAATT 100 142
CWR61_RS10860 2268818 .. 2268831 +  -2.3  -3.62597   GAAGCATCGATGGTT               TCGGG CGGT CGCGA                TTCTTGAGCCATGAA  50 164
CWR61_RS10865 2270001 .. 2270014 +  -5.9  -2.73364   AGGGCTTGAAGGCGG               CGCCG GCGG TGGCG                TGCTTCACCTACGGC  46 360
CWR61_RS10875 NONE
CWR61_RS10880 2275221 .. 2275241 +  -2.3  -2.62184   TGAGTCCGGCGAGAA            CGCGGCCGC GAC GCTACAGCG            TCATGTGCCGCGGCA  38 38
CWR61_RS10925 2283493 .. 2283521 + -14.6  -4.66953   AATCCATCATGCATC       GGCGCGCG-CCCGC CGG GCGGGGCGCG-GCC       TTTTTCACCTGTTAC 100 40
CWR61_RS10930 2287219 .. 2287276 + -20.5  -2.71712   CGGACACACCGTCAC GCGC-AAGGCGGGCTGGCTGCGCCGGTC ATG GACCTGCAGGGTCAGCCCGCCATCGCGC ATTTCGAACAGGGCG  93 63
        glnH NONE
        glnP NONE
        glnQ 2290759 .. 2290780 +  -8.8  -3.05844   GTGGATACCGCGTCG           TCGTGCAT CGTGAC ATGCACGA            TATTGGCGTCGGCCG  55 165
CWR61_RS10980 2296623 .. 2296668 +  -5.3  -3.65522   GGCCAGCAGGGCGCC GCCGGT-GGCGG-GCGCGTCG AGGTAG CGGCGCGCGCCGACGAACCGC TTGTTCCAGTAGCTG  54 60
CWR61_RS10990 2299232 .. 2299250 +  -4.4  -3.68073   GTGAGCGGTCGCTTC             CGACAGGC CTT GCCTGAGG             TTGTTGAATGCAGTG  55 330
CWR61_RS11005 2301610 .. 2301655 + -19.7  -2.82156   TCAACAGCTTGCCCA CGCGCTCCTGCTCGGCCAGGCG CCA CGCCTGGGCTATCAGG-GCGCG TACTTCGCTTTCGGT  93 215
CWR61_RS11020 2304361 .. 2304377 +  -6.5  -4.78107   AACTTGCGGCCGCGC              TGTCGGC CAC GCTGGCA              TTTTTCGTGCTGCTG  84 139
        rdgB NONE
CWR61_RS11040 2309749 .. 2309771 +  -9.2  -4.27519   AATCAACGCCCTGTG           TTTTGCACCA TAA TGGTGCTAAA           TTTCTGTTCTCGCAT  81 63
        glnA 2311311 .. 2311363 + -22.1  -3.11634   ACTACAGCCTGTAAT CCGGGAGGCTGTGCGGCG-GCGGGCC TCGC GGCCCGCCCGCCGCGC--CGTCCCGG TTGCCTCCTATGACG 100 27
CWR61_RS11050 NONE
        ntrC 2314028 .. 2314044 +  -3.6  -3.05384   GGCTTGGGATCGCGC              CAGGCG TAGAC CACCTG              TTCGGTGAGCGGCAC  43 126
CWR61_RS11065 2315747 .. 2315769 + -16.2  -4.07568   TGCCGTAAAGTGAGA           CGGGCGCCGC CTG GCGGCGCCCA           TTTTCCCACGGCGCG  95 33
CWR61_RS11070 2317050 .. 2317097 +    -6  -3.73775   GCAGGTCGGGCGAGG GCGCC-ATGGCCCGCGCCAGCGC CAC GCGCTGCTGCTGGCCGCCGGAGA TTTCGTGCGGATAGC  61 353
CWR61_RS11090 2321488 .. 2321501 +  -9.5  -5.27335   CACCGCCAGGAACGA               CCGCC CTCG GGCGG                TTTTTCTTTGCCCGC 100 48
CWR61_RS11100 2323675 .. 2323717 +  -6.8  -3.52918   ATGCCGGCCGGCGCC GGGTGGCGCAGGGCGCCTG AACGTG CCGGCGCCGC-CGCCAACC TTCATTTCCACCTTC  57 6
        dkgB 2324693 .. 2324713 +    -9  -3.14564   GCAGACTGCGCGGAG            TGCTGCGT CGGGA ACGCAGCG            TTCGTCAGAGGATGC  57 152
CWR61_RS11110 2327655 .. 2327686 +  -6.5  -3.55761   GGCGCAATGGCGCGC      GAGGCTCGTCC AAATGGTTGA GGGCGAGCCAC       TTTCGCAAATGCCTA  57 104
CWR61_RS11115 NONE
        recG NONE
CWR61_RS11125 2331480 .. 2331492 +  -4.8  -3.63515   CGCCGCGCTCTCGCG                CAGC AGCTC GCTG                TTGTTGACGCTCAGG  54 255
        mmsA 2333810 .. 2333837 + -14.8  -2.62184   GCCCGAGCCGGCGCC        GCCGGGGGCGTGC GGG GC-CGCCCGCGGC        TCGTGTCGGCGCGGC  74 41
CWR61_RS11140 2334448 .. 2334469 + -15.9   -5.4505   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 47
CWR61_RS11160 2340647 .. 2340657 +  -2.4  -2.84878   GAAAGATGCAGCCAT                 CGGG AGC CCAG                 GTTTGAGTTCGGCGC  40 74
CWR61_RS11165 NONE
CWR61_RS11170 NONE
CWR61_RS11175 NONE
CWR61_RS11180 NONE
CWR61_RS11185 NONE
CWR61_RS11190 NONE
        tviB 2348762 .. 2348777 +  -4.6  -2.87132   ACGTGCTGCCTCCCG              AGCAGG CCGA CCTGCG               TCTGTAAGGAGAGCA  45 3
        tviC NONE
CWR61_RS11205 2351888 .. 2351906 +  -5.2  -3.13403   GATGAACCGGAGCAC             GGCATGAG CGC CTCGTTCC             TGTTCCTGCAAGGCG  47 36
CWR61_RS11210 NONE
CWR61_RS11215 NONE
CWR61_RS11220 2355412 .. 2355431 +  -5.6  -3.11999   CCTGCGGCACATGGG            ACTGGCCC CACC GGGCTAGG             TTCGGTCGATTTCCT  49 7
CWR61_RS11240 2366922 .. 2366945 +   -16  -5.14563   CCGCGCAGTCCGAAA          GCCGCCGGGA GATT TTCCGGCGGC           TTTTTTGCTGGACGA 100 60
CWR61_RS11265 NONE
CWR61_RS11270 2373139 .. 2373149 +  -3.2  -3.65902   CAATTCACGGCGCCA                 TGTG TCA CGCA                 TTTCGATGGGGTCCC  51 103
CWR61_RS11275 2374494 .. 2374530 +   -13  -2.71791   TCAACGTACGCCCAG    GTTTCCGGCTCCGG GTCGCACTA CCGGAGCCGGAGCC    ATTTGGAGCACGAGT  68 72
        livH NONE
        livM NONE
CWR61_RS11290 NONE
CWR61_RS11295 2378514 .. 2378524 +  -8.2  -3.53091   AGCACCACGGCATCG                 GCGC CGC GCGC                 TTTCAGGCGGGCGAT  61 359
CWR61_RS11310 NONE
CWR61_RS11315 2382101 .. 2382139 +  -3.9  -3.53012   GGGCGCTGCACAGCA  GC-TGCCCGGCCACGATAT AGA ACATCGTGGTCAG-CATGC  TTTCGCCGCGGCCAA  49 340
CWR61_RS11330 NONE
CWR61_RS11335 2384203 .. 2384234 + -11.6  -3.05463   CCGCGCCTGGCGCCC     GGCGGAGCGC-GCC AATGAA GGCCGCGC-CCGCC      TTGCGTACGCCGCGT  66 8
CWR61_RS11340 NONE
CWR61_RS11345 2385797 .. 2385818 +  -8.7  -2.70932   GTGCGCGACGCCGGC           T-TCGCCGCC CAC GGCGGCGGCA           TAGTTGAAGGGCCGG  52 152
CWR61_RS11405 2395671 .. 2395699 +  -6.5   -2.9348   GCCGCGCAGCAGGGC        GGCTAAGGCGCGG CGC CCGCGTCACACCC        TATGTAAAATTTACA  50 20
CWR61_RS11410 NONE
        arsC 2397759 .. 2397792 + -23.2  -3.33696   CCACGGCGTCGTAGT     TGCGGCCTGGCGCG GCAAGA CGCGCCAGGCCGCG      TTCGTTGGCGGGCCG 100 70
CWR61_RS11435 NONE
CWR61_RS11440 2401828 .. 2401868 + -11.8  -4.05446   CGGCGCGCCGGCGCG CTGAACGCGCCGC-GCCGGC GTC GCCGGCCGCGGCGC-TAGGG TTTGTCGTTCCAGAA  84 22
CWR61_RS11470 NONE
CWR61_RS11475 2407510 .. 2407527 +  -3.4  -2.70932   TGGTATGGCCGGCGC             GCC-CTG CAATA CAGTGGC             TCATTGGGCCGCGGG  40 61
CWR61_RS11480 2410808 .. 2410848 + -15.5  -3.01712   AGGCCAGTACGTGCC CGGCGTGCGTGCCGCTGAC GCGCA GCCAGCGGCA-GC-CGCCG TGTTCGAACAAGGCG  74 279
CWR61_RS11530 2431176 .. 2431199 +  -4.4  -3.58343   ACTTGTTGGCGGTGG          CGCGCGAGAC GGTG GACTCGTGCA           TTTCCAGCTCGTCGG  51 342
CWR61_RS11545 2435103 .. 2435130 + -13.4  -4.07568   TGCTTGCTGACCCGC        CTGCCAGGCGCCC TTG GGGCGCC-GGCAC        TTTTCGGGAGCAGGC  89 58
CWR61_RS11550 2436895 .. 2436929 +  -2.7  -4.57569   CGCGCCACCCTCAAG    CAATG-GTGGGCCGGC TGAG GCCGGCCGACATCCTG     TTTTTCCCGCAATCA  67 8
CWR61_RS11555 2437173 .. 2437187 +  -2.7  -2.78384   AGGCGGTCTGGCGGC               GCGCC ACCCG GGAGC               TGTAATGGGGGCCGC  38 6
CWR61_RS11560 2437651 .. 2437689 +  -3.7  -3.15544   GCCGCCTGAACCCGC  TTATGGCGTCGGGCGGCG GGCG CGCAGGCCC-CGCCACAA   TTCCTCGGCGTAGGG  45 32
CWR61_RS11570 2438816 .. 2438844 + -10.1  -3.57144   GTCGGTGTCGGCCGT        GCCGGAAAGGCGC ACC GCGCCGTCGCGGC        TTTGGACCTGCACCG  67 150
CWR61_RS11580 2441958 .. 2441972 +  -4.2  -3.48276   GGCCGGGCTGGCACA               GCGCTT GCG AACCGC               TTCTGTCACGGGCGG  51 135
CWR61_RS11585 NONE
CWR61_RS11590 2443249 .. 2443281 +  -3.1  -3.09516   ACTGGTAGGCCATGG      CCAAGCCGGCGTGGC ATG GACACGCCGGCCACC      TTCAATCATCGGAGC  43 33
CWR61_RS11595 2444560 .. 2444576 +    -5  -2.57931   GCGCAGCCCGCGCAC              GCGGCG CGCGC CACCGC              ATTGTGAGGAATCCG  43 2
CWR61_RS11600 NONE
CWR61_RS11605 NONE
CWR61_RS11610 NONE
CWR61_RS11615 NONE
CWR61_RS11620 NONE
CWR61_RS11625 NONE
CWR61_RS11630 NONE
CWR61_RS11635 2452937 .. 2452951 +  -5.6  -3.96148   CAGCAGCAGGATGGC               GCCGTC GGT GACGGA               TTTGTACTCGCCCGC  63 270
CWR61_RS11650 NONE
CWR61_RS11655 NONE
CWR61_RS11660 2455894 .. 2455920 + -11.5  -2.65815   GCGGCCGGCGGCTAA        GCCCGGCC-GCC CGTT GGCTGGCCGGCC         TGCTGTGCCTGTGGA  62 26
CWR61_RS11665 2456490 .. 2456503 +  -9.5  -3.14211   GACGCCACGCGCCCC               GGCCG CTAG CGGCC                TTACTCGCCCGGCGT  60 17
CWR61_RS11695 2462560 .. 2462597 +  -5.7  -3.04144   GACCACGCGCGCGAT GCGGCG--GT-CGCGCACG GTGA CGT-CGCGGACCACGCCGC  TCTTGCCGGTAAAGC  48 458
CWR61_RS11735 2469138 .. 2469193 + -11.8  -4.56775   TGCCGCGGCAGGCGA GCACGCGCCGT-GCCCGGGC-GGGCCG ACCGC CTGCGCAGGCCGGGCCGCGGCG-GTGC TTTTTACACGCGGCT 100 133
CWR61_RS11740 NONE
CWR61_RS11745 NONE
CWR61_RS11750 2473760 .. 2473792 +    -9  -3.05963   TGTCCACCGTGCCCA     CGC-GCGCGCCGTCC GGCA GGGCAGCGCGCAGGG      TATTGACCTGCACGT  55 285
CWR61_RS11765 NONE
CWR61_RS11770 2479710 .. 2479725 +  -4.6  -3.41051   GAGGTCGGCAATGGC              CTGGTG GAAG CGCCGG               TTCTCGTCGAAGTAG  52 290
CWR61_RS11780 NONE
CWR61_RS11785 NONE
CWR61_RS11790 2484186 .. 2484198 +  -4.7  -3.16668   ACCTGAAGCCGGCCG                CGCAG GAG CCGCG                TTCATGAAGCTGTTG  47 6
CWR61_RS11795 NONE
CWR61_RS11800 NONE
CWR61_RS11820 NONE
CWR61_RS11825 NONE
CWR61_RS11830 2492853 .. 2492867 + -12.8  -3.48924   CGGGCGCGTAGCTGG               CGCCGC CGC GCGGCG               TTCTGTCGCCGATCC  73 152
CWR61_RS11930 2509751 .. 2509804 + -13.8  -2.84325   GCCAACATCATCAAG TAAG-CGGCCCCGTCCCGGTCCGCGC CGCG GCGCGGACCGGCA-GGGCCCGGCCAA TCCTCTTTCCCGCAG  73 23
CWR61_RS11935 NONE
CWR61_RS11940 2511297 .. 2511324 +   -17  -2.57274   CCTGCCCGGCCGCCA        GGGCCGGCGCAA GGCC TTGCGCCAGCCC         CTATTGCTTCTGCGC  81 43
CWR61_RS11960 2516064 .. 2516085 +  -5.7  -3.71527   AGCCCCGAACCAAGG           GGCTGGCCG GCCT CGCCAAGCC            TTTCGATAATTCGCA  60 53
CWR61_RS11970 2517706 .. 2517719 +  -3.7  -3.64703   CGCGTTGGCCGCGAT               GCCGC GGTG GCGGG                TTTCGCTGGCCAGGG  51 214
CWR61_RS11995 NONE
CWR61_RS12000 2524514 .. 2524532 +  -5.2  -3.05384   CCGTCTGAACGCCTC             CGGGAGAC AGG GTTTCCCC             TTGGATGCGCGCCGG  47 33
CWR61_RS12005 NONE
CWR61_RS12055 2536818 .. 2536833 +  -7.5  -3.83998   GCCGCGCCCAGGCAC              GGGCG CCGCGC CGCCC               TTTCCTATCGAATAC  67 41
CWR61_RS12065 NONE
CWR61_RS12070 NONE
CWR61_RS12075 NONE
CWR61_RS12080 2541963 .. 2541986 +  -3.7  -4.36914   CCCCGCTACAATGTC          GGCCTACAG AGTCGA CCGCAGGCC           TTTTCTGCGCGGCCA  69 83
CWR61_RS12085 2542985 .. 2543004 +  -6.3  -2.91681   CCACCCGGTCCAGGT            CGGCCGG CACCTT CAGGCCG             TATATCCACTTGCGC  47 131
CWR61_RS12120 NONE
CWR61_RS12125 2550302 .. 2550324 + -12.7  -3.21099   TAGCGTTGCAGCGTG           CGCGCCACG ACCTG CGTGGTGCG           TTCGTCGTCGGCGAC  68 194
CWR61_RS12145 2554123 .. 2554141 +  -2.2  -3.90112   GGCGCCTGAGCGGCG             GCCTGGGC ATG GACGGGGC             TTTGCTTGGCGGGCC  55 32
CWR61_RS12150 2554898 .. 2554923 + -17.6  -2.79831   GGGCCCCGCTCAGAA         CCGCCAGCGC AGGACC GCGCTGGCGG          TGTGCTGGCGGTTGC  87 66
CWR61_RS12155 NONE
CWR61_RS12160 2557093 .. 2557118 +  -3.9  -3.24232   GGCCGATCCGCCCGC         CGCCCT-GCCTA GAA TCGGCGAGAGCG         TGTCTTTCAAGGGAG  47 120
CWR61_RS12165 2558191 .. 2558210 +  -7.8  -3.25823   TGGCCAGCAGCCCGC            CGTGCGCG ATGC CGTGCATG             TTGGTATGCGGCGGC  55 291
CWR61_RS12175 NONE
CWR61_RS12180 2560512 .. 2560559 +  -3.3  -2.79302   GAGGTCACGCCTGGG CG-GCGAGATCGTGCCGCCG GGCCAGCAG CGGCAGCATGGCGTCGCGCG TCTGGTCCAGGTGCT  41 172
CWR61_RS12190 NONE
CWR61_RS12195 NONE
CWR61_RS12200 NONE
CWR61_RS12205 NONE
CWR61_RS12210 NONE
CWR61_RS12215 NONE
CWR61_RS12220 2569028 .. 2569070 + -11.2  -3.73224   TCGCGCCCGGCGTAG CGGTCGGCCGGCGCCACGC AGACCA GCATGCCGC-GGCCCACCG TTTCCTGGCGGATCA  74 436
CWR61_RS12230 NONE
CWR61_RS12235 2571768 .. 2571792 + -11.4  -4.22652   TGTACGCGCGCTGAA         CGCGGGGCCGC CGCG GCGGCCC-GTG          TTTTCCCTAGTGTCC  88 27
CWR61_RS12240 NONE
CWR61_RS12245 NONE
CWR61_RS12250 NONE
CWR61_RS12255 NONE
CWR61_RS12260 NONE
CWR61_RS12265 2577131 .. 2577165 + -12.1  -2.62184   CACGCAGGCCACCGG    CGC--GCCGCGCCCGCC CAC GATGGGCGCGGCCAGCG    TCATGTCCCCCAGGA  62 165
CWR61_RS12275 NONE
CWR61_RS12280 NONE
CWR61_RS12285 NONE
CWR61_RS12290 NONE
CWR61_RS12295 NONE
CWR61_RS12300 NONE
CWR61_RS12305 2585858 .. 2585871 +  -8.1  -3.44146   ATGTCGCCCTCGCCG               CTGGC CTGG GCCAG                TTCGTTCTCGACCCG  58 206
CWR61_RS12315 NONE
CWR61_RS12320 NONE
CWR61_RS12325 NONE
CWR61_RS12330 NONE
CWR61_RS12335 2591975 .. 2591991 +  -6.5  -3.65046   CGGCCGGGCCGCTGC              GATGCAC GAC GTGCAGC              TTGTTGCCGTCGGGG  57 76
CWR61_RS12360 2596433 .. 2596457 +    -2   -3.1634   CGCCTTGACGGTTCC         GCCGCGTCCGC GCGT GCCCA-GCGGC          TTGCATGCTTTCCCC  42 33
CWR61_RS12365 2597366 .. 2597391 +  -5.5  -4.06502   GCGCCCAGGCATGCC         AATGCCCACTGA TCC TCAGTGG-CATA         TTTAATTTCACACTG  64 51
CWR61_RS12370 2599115 .. 2599131 +  -6.5  -3.39895   CGCGGAACCAACATG              CCGGC CCACAAA GCCGG              TTCATTGCTACACCG  55 167
CWR61_RS12375 NONE
CWR61_RS12380 NONE
CWR61_RS12395 2603868 .. 2603901 + -10.9  -2.72855   TGGGCTGAGGCCGCT     TCACGCCGCGGCGGCG GCA CGCCGCTG-GGCATGC     TCCTTCAACAGTTTG  62 33
CWR61_RS12405 NONE
CWR61_RS12410 2606844 .. 2606854 +  -5.4  -3.73775   CCTTGCCCACAGGAT                 GACA CCA TGTC                 TTTGATCGAAATCCG  58 43
CWR61_RS12415 2607481 .. 2607502 + -13.7  -3.05384   CGGCCGGCGCTTCGA           CGCG-GCGCG TGG CGCGCACGCG           TTCGATGCGCGGCCC  69 78
CWR61_RS12455 2614987 .. 2615008 +  -7.9  -4.15044   CCGCCGCGCCACGCC           TGCCCGCGC ATCG GCATGGGCA            TTTCTTGCGCAAAAA  71 100
CWR61_RS12480 2621156 .. 2621176 +  -9.6  -3.06171   TCCCCTCTTATGCAC            GCCGGCCG CGTTC CCGCCGGC            TCTGTCCTTGTTCCA  60 364
CWR61_RS12485 2622635 .. 2622665 + -11.9  -3.05596   CGCCATGCGCGCAAG      GCGTGCGATGCGCC GGCC GG-GCATCGCACGG       TTGACTGGACGAATC  69 70
CWR61_RS12490 2624449 .. 2624469 + -16.9  -4.96848   CCCGCTGGTCCCGCT            GCACCTGGC CTG GCCAGGTGC            TTTTTATATAGGCCA 100 82
CWR61_RS12500 2625376 .. 2625388 +  -5.5  -3.13371   CGCTATTTTTATTCG                CCGGA CGC TTCGG                TATATTAGTGGCCTG  49 76
CWR61_RS12505 2626199 .. 2626211 +  -4.7  -3.71649   CCTCCCGCGCCCGAC                GCCGG CGC CCTGC                TTTCCGATTTCCCGC  58 63
CWR61_RS12510 NONE
CWR61_RS12515 NONE
CWR61_RS12520 NONE
CWR61_RS12525 NONE
CWR61_RS12530 NONE
CWR61_RS12535 2632959 .. 2632979 + -10.4  -2.70932   CTCGACGCCATGGTG           GCGC-GCGC CAAC GCGCCGCGC            TGATTCACCCCGCCC  59 2
CWR61_RS12540 2634536 .. 2634557 + -18.7  -2.52464   TGCGCTGAAAACGGC           GCCGGCCCC TCGC GGGGCCGGC            TGCCTTGCGCGCCGA  86 33
CWR61_RS12600 2646197 .. 2646255 +  -8.8  -3.28924   TGGCCAGCGGCAGCG CCGC-CCCGGCGGCGAACGAGGCGGCC GAGGCCAG GGCCGCCT-GCAC-CGGCTGGGCGCGG TTGTGCACCGAAATG  59 249
        smpB 2652057 .. 2652068 +  -5.8  -3.01712   AGCACCGGCAGCGTA                TCGC CCGC GCGA                 TATTGCGCCACCCCG  48 97
CWR61_RS12660 2655466 .. 2655486 +   -14  -4.85782   GCAAGACGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTCTTTTTCCAGCG 100 52
CWR61_RS12670 2659334 .. 2659375 +  -3.7  -3.55444   TGCGTTCGGGCAGCG CCGGCTCGGGCGCGTGG GCCACGAACA CCACGC-CCTG-GCCGC TTTCGACGCTGGCCA  51 501
         map NONE
CWR61_RS12760 NONE
CWR61_RS12765 2679475 .. 2679494 +  -3.5  -2.70017   CCGCCGGCCTAACCT            GGCGCGGC AACCC GTC-CGCC            CTCTTTCCGTTTCCC  40 29
CWR61_RS12770 2679994 .. 2680052 + -23.4  -2.71364   GCGTTGCGGCGCAAC -GCCTG-AC-GCGCCGCGC-GGCCGGCTTG CGA CAAGCCGGCCAGCGCCGCGCCGTTCAGGCG TCGTTGGCCGCGTAG 100 20
CWR61_RS12795 2685030 .. 2685040 +  -2.4   -3.3422   CTTACCCGGCCAATA                 AGGC GGC GCCA                 ATTTTTGACAGAATC  45 119
CWR61_RS12800 NONE
        fliS 2686876 .. 2686901 +  -3.1  -4.82901   CACCCTGCGCCCGCC         GTTCCGGCCTG AAAC CAGGAAGGCAC          TTTTTGTCCAGCCGC  75 14
CWR61_RS12810 NONE
CWR61_RS12815 NONE
CWR61_RS12820 NONE
CWR61_RS12825 2689532 .. 2689578 + -12.2  -3.53444   CCCAGGCGCCAGTTC GGC-CTCCGTGGCGC-CGCCGC TTTGC GCGGCGCGCACCACGGCGCGCA TTTGCGACAGCATGC  73 279
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
CWR61_RS12860 2696693 .. 2696703 +  -6.8  -3.37344   GCGGGCGCGAATTGC                 GGCA GAA TGCC                 TTCATTCCATCAAAA  55 106
        fliL NONE
        fliM NONE
        fliN NONE
        fliO NONE
CWR61_RS12885 2699964 .. 2699976 +  -3.3  -2.58544   ACCTGCTGCTCGGCT                CGCTG GCC CAGAG                CTTCTACCAATAGCG  39 0
CWR61_RS12890 2700257 .. 2700267 +  -2.4  -2.78384   GCTGATCGGCCAGAT                 CCCG ATG CTGG                 TGTCCTGAACGCGCC  38 7
        fliR 2701258 .. 2701308 +  -9.8  -3.05384   GGGAGACTGGCACCC GCTGACTCCCTGCGGTGCCTGTCCC CGCA GGGACAGGCACC-C-GGCGG-CACC TTGCCTGCCCCCCGC  60 197
        flgA 2721153 .. 2721168 +  -5.4  -2.79004   CCCCCATCGGGCCGG              TC-CCGC GCA GCGGAGA              ATATTTTGAAGATCC  45 131
        flgM NONE
CWR61_RS12990 2722075 .. 2722113 + -11.7  -3.04144   CCCGGCCCCAGCAGC  CCAGGC-AAGGCCTGGCGC ATC GCGGC-GGCCTGCGCCTGG  TGTTCCAGCTGCCAG  62 134
CWR61_RS13070 2739696 .. 2739744 +    -8  -4.07568   CTGCCCGCCGCCCAC CACCTGGCGCAGGTGGTGTAGGC GCGC GCCTGCGCCGCGCGCGCTCG-TG TTTTCCGGCCGCGGC  71 5
CWR61_RS13075 2741289 .. 2741315 +   -13  -3.67597   CCATGGCAGTACGTA        CGCCCGGCCGC CTCACC GCG-CCGGGCG         TTCTTGCATCCGGCG  81 79
CWR61_RS13095 NONE
CWR61_RS13100 NONE
        folD NONE
CWR61_RS13110 2753486 .. 2753521 +   -19  -2.60257   ATGAAGCCTGACCTC    TCAGGTGCCTGTCCCC GCAT GGGGACTGGCACCTGC     TGACTTCTGACGTCT  89 129
CWR61_RS13115 2754366 .. 2754383 + -14.1    -3.965   ACCCAGTGATCCGGA             CCGCGCC CCAG GGCGCGG              TTGTTGCTTTTGCGC  93 32
CWR61_RS13120 2754775 .. 2754805 + -25.6  -4.56597   CCGACGCCTCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTTGGGCGCGAGC 100 44
CWR61_RS13140 2762095 .. 2762119 +  -8.5  -2.70932   CTGGGCCGGGCGCAA          TGGCTTGCCGT CGA GCGACAGGCCA          TGGTTGAGCAGGGCC  52 280
CWR61_RS13150 2763235 .. 2763265 +   -11  -3.04517   GGTCGCTGGCGCGCG       CGCCTGTCGCGCCG CGC TGACGCCACGGGCG       GTTTTGACGCAGAAT  66 6
CWR61_RS13155 2764582 .. 2764635 + -34.7  -3.55444   TCCCCGCTGCGGCAG GGGTGCCTGTCCCCGCTGCGGCAGG GGTG CCTGTCCCCGCGGGGACAGGCACCC TTTACCCCCTCAGCG 100 96
CWR61_RS13170 2766372 .. 2766408 +  -2.8  -3.53012   CAGATGCGCTGGCGC    TGCCCGCCCGAGAACT CGTGT GGATATCGGTCGGTCA    TTTCGGGCAACAGCC  47 488
CWR61_RS13200 2773849 .. 2773884 +  -2.3  -3.57462   CGGCGCGCTGTTCGG    CCGCTGAGGGCCGCG AACAAC CCCAGCCTTCCCCGG     TTTGCGCGTAGCATC  50 19
CWR61_RS13205 2774819 .. 2774849 +  -4.5  -4.08692   GTTGACGTGGCCGTT       GCTGTCCTCGCCG ATGAA CAGCGTGCGCAGC       TTTTCCGAGAACTTG  63 370
CWR61_RS13220 2777893 .. 2777925 + -11.1  -3.77119   CCGAACGCGCGCGGC      GTGATGCGGGGCCCC GGC GGGGCCTGGCGCCGC      TTGTATTCGTTGATG  74 484
        argH 2782400 .. 2782415 + -11.8  -5.14563   CCGCCCATGAAAAAA              CCCGGC TCGC GCCGGG               TTTTTTCATGCCGCG 100 47
CWR61_RS13255 2786237 .. 2786289 +  -7.6  -5.35365   GGGGCGCCGGAAAGT GGAA-GTCAGCGGGAGCCAGTCCCC CTGC GGGGACAGGCTCCCGGGCATATTGC TTTTTCTTATGTTTT 100 286
CWR61_RS13260 NONE
CWR61_RS13265 NONE
CWR61_RS13270 2789124 .. 2789142 +  -6.8  -3.28712   ATGCCGAAGCCATAA             GATGTATT ATA GATACATC             TTATAAACCGCAGGA  54 442
CWR61_RS13280 NONE
CWR61_RS13285 NONE
CWR61_RS13290 2791224 .. 2791239 +  -6.8  -3.15579   ATGTACTACATCGAC              GCGTTC CGCT GAGCGC               TTCCTGCCCGCTTGG  51 14
         xth NONE
CWR61_RS13300 2793690 .. 2793701 +  -2.2  -2.90571   CCGCTACCAAAACGG                C-CGG AAT CCGTG                TATAGTTGCGGACTT  40 81
CWR61_RS13305 2793813 .. 2793840 + -12.8  -5.63517   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC 100 42
CWR61_RS13335 2799957 .. 2799968 +  -5.8  -4.08767   CCGCAAAACACGAAT                GCAC ACGT GTGC                 TTTTCAAGCCGTCGC  66 267
CWR61_RS13340 NONE
CWR61_RS13345 2801934 .. 2801949 +  -3.2  -3.57144   TGCTGGAAAAGACCC              GGGC GAACTGAG GCCC               TTTCGACATGACCGC  51 15
CWR61_RS13350 NONE
CWR61_RS13355 2803818 .. 2803845 + -14.1   -3.6502   TATGTAGGCCGGACC        GAGGGCCTGGC CGCCGC GCCAGGCCCGC         TTTCCGTCCGCCCTA  84 34
CWR61_RS13390 2808761 .. 2808773 +  -4.7   -2.6652   CGCAGCGCTGAGGCC                GCGCC CTT GCCGC                ATTGATTGCATTTTG  44 30
CWR61_RS13395 NONE
CWR61_RS13400 2809473 .. 2809485 +  -2.6  -3.72576   ACCGCCATCGACCCC                TGGC AAGCC GCCG                TTTGATGGCAGGCCG  53 8
CWR61_RS13405 2810430 .. 2810440 +  -6.8  -3.50853   TGGCGGTGACGAACA                 CGTC GAA GACG                 TTGTAGTTCAGCGAG  55 391
CWR61_RS13415 2813154 .. 2813166 +  -9.1  -3.55563   ACGTCGAGGTCGAGC                GCCTG GCG CAGGC                TTTCGAAGGTCAGGT  63 502
CWR61_RS13430 NONE
CWR61_RS13445 2819159 .. 2819176 + -14.1  -4.18018   CAGCGCCCCCGCACA             CCCGCCC CTCG GGGCGGG              TTTTCCATGGGCGGG  93 54
CWR61_RS13455 2821058 .. 2821113 + -13.1  -2.71144   CCGGGCGCCTTCAGC GCCCGGCGCAG-GCGGCGCGCAGGGCC GCCA GGTCGGGCGTGACGCCCAGC-CCGGGC TCCTTGCCCAGCGTG  68 46
CWR61_RS13470 NONE
CWR61_RS13475 NONE
CWR61_RS13480 NONE
CWR61_RS13485 2827745 .. 2827756 +  -7.2  -3.29144   AGGTCGGTCATGGCC                GGGC CGCT GCCC                 TTGTACGGCACGTGC  55 444
CWR61_RS13495 NONE
CWR61_RS13500 NONE
CWR61_RS13505 2831782 .. 2831792 +  -2.4  -3.73106   CCGCCATGCCCTAGC                 CGGC GCC GCCC                 TTCTTCGCCTTTTCC  53 27
CWR61_RS13510 NONE
CWR61_RS13515 NONE
CWR61_RS13520 NONE
CWR61_RS13525 NONE
CWR61_RS13530 NONE
CWR61_RS13535 NONE
CWR61_RS13540 2839054 .. 2839066 +  -4.7  -3.28712   TCGTGCGCTAGGGGC                GGCCG GCG CGGGC                TTGTACGCCGAGGCG  49 30
CWR61_RS13550 NONE
CWR61_RS13555 2841916 .. 2841945 + -13.5  -3.04144   GGCTGGGGTAGCCAG       CGGTGCCTGCCCC GACG GGGGCAGAGACCG        TCTTGGCCGTCAAGC  71 30
CWR61_RS13575 2846963 .. 2846987 +    -2  -3.14564   TCCCAGTTGCGCCGC         CAC-CCGCTGG CCCA CCAGCGGCGCA          TTGGTGCCCACGTCC  43 283
CWR61_RS13625 2860001 .. 2860024 +  -2.2  -5.01732   CGCTTCCTGCGTCCG          CGCCAGGCAT GACG ACGCCACGCG           TTTTTTCAAGAGATT  79 14
CWR61_RS13630 2861307 .. 2861353 + -20.1  -2.74144   CCGCCTGTCGCGCTA GCGGCCGGCGGGCCGGCGATGC GGTA GCATAGCCGGCCCGCCC-CCGA GTTTCCCCATGGACC  93 25
CWR61_RS13635 NONE
CWR61_RS13640 2862648 .. 2862675 + -21.4  -3.04144   ACCCGCAGGAATGCT        GGTGCCTGTCCC GGCA GGGACAGGCACC         TATTACGGCTGGCGG 100 47
CWR61_RS13650 2865384 .. 2865405 +  -2.9  -3.21395   GCGCGGCCGCGCACG           TCGGCGG GGATGAAG CGGCCGA            TCTTCTCGGCCAGGT  43 463
CWR61_RS13670 2867923 .. 2867963 + -12.4  -2.57026   GGCAACCGCGTGACC  CCCCGGGTGCCTGTCCCC ACTGC GGGGACTGGCACCCGCCA  ATTGCTGTGCCTGTC  64 28
CWR61_RS13675 2868786 .. 2868799 +  -2.3  -2.64616   TCCGCAACCCTCACC               CCTGC TGGA GCACG                TCATGTCGCTGGAAA  38 41
CWR61_RS13680 2869449 .. 2869482 +  -7.4  -3.17392   GGCAAAGTGCGATAA     TTGC-CCGTTGCGCC GCCGG GGCGCACCGGAGAAA     TTGCCTTGACCCGTA  57 49
CWR61_RS13685 2871066 .. 2871116 + -11.7  -3.10895   CCTGGTCCAGGCCTG CCAGCCA-GCGCGCC-GGCTCCGGC GCG GGCGCGGCCTGGCGCGCATGGCGGA TCTGTATGTATTGCG  62 485
CWR61_RS13700 2873181 .. 2873191 +  -2.4  -3.91087   ATCGGCATTGCCCCC                 ACGG GCG CCGG                 TTTCCTATCCTTTGC  55 105
CWR61_RS13705 NONE
CWR61_RS13710 NONE
CWR61_RS13715 NONE
CWR61_RS13720 2878433 .. 2878449 + -10.8  -3.56821   CCCCGCCTCCGCTTC              GCCGGC CTGGC GCCGGC              TTTCCAGGATCTCCT  71 454
CWR61_RS13735 NONE
CWR61_RS13740 NONE
CWR61_RS13745 2881814 .. 2881839 +  -8.9  -3.06671   ATAGCGCCGGCGCTA         GCCGCGGCCGCC CAT GGC-GTCGCGGA         TCTTGCGGTCGGTAT  57 37
CWR61_RS13755 2883038 .. 2883084 +    -8  -3.19389   AGGAGCTGCGCAGCG GCGAAACCCTGTCGCTGCTGCA GAAAG TGC-GCAGCGACAGCGAA-CGC TTCATCAATGCCTTC  57 452
CWR61_RS13765 2885322 .. 2885336 + -11.4  -2.79831   AACCGGCCATCAGGC               CCACCG TGG CGGTGG               TCTCGTGCCCGTTGC  59 93
CWR61_RS13775 2886909 .. 2886966 + -18.9  -2.83403   GTTTAATAGCAAAAT CCTTCGCCCTTCGAGCCGCCGCCCGGC CCCT GCCGGGCGGCGGCCTGGGCGATGGCGG CTTTCCTGGCGGCGC  93 103
CWR61_RS13780 2887747 .. 2887764 +  -3.3  -4.57073   CGACCTGGTGGCCGC             CCTGCTC AGTT GAGCGGA              TTTTTGCGCAGGATC  69 13
CWR61_RS13785 2889836 .. 2889851 +  -2.4  -3.55444   CTGTCGTATTGCGCG              TAGCGC GCCG GCGCCG               TTTCGGCCGTCAGCG  50 362
CWR61_RS13800 NONE
CWR61_RS13805 2891944 .. 2891975 + -20.2  -2.82759   CCCCGTCATATTCGG      CAGGAGCCAGTCCC CGTC GGGACAGGCTCCTG       TGTCATAGGTATCTT 100 214
CWR61_RS13815 2893738 .. 2893790 + -11.8  -3.01712   CCCCGTGCGCTTCAT GAAG-GCGCGGCCGGCGGCCAGGTCG TAG CG-CATGGCCGCCAGCCGCTCGCGGC TGTTCAGCGGCAGGA  62 324
CWR61_RS13825 2895757 .. 2895772 + -10.4  -2.78384   GCCAGTTCGGGGTCG              TCGCGC AGCC GCGCGA               TGTAGTCGGCCACCC  56 498
CWR61_RS13840 2898655 .. 2898677 + -11.3  -2.70932   TGGGGCTGTAGCTCA           CCAGCAGGC ACTTG GTCTGCTGG           TAATTCGACAGCGCC  59 300
CWR61_RS13850 2902258 .. 2902294 +  -2.9  -3.05384   ACCGCCACCTGGCGC   GCCAACGCGCGTAGCG CCGGCC TGCTACGCTTGC-GGC    TTGCCTGCGGGAGCC  43 12
CWR61_RS13855 2903584 .. 2903599 +  -3.2  -3.23692   TCAGCGTTTCCAGCA              GGCG CTTGCGCT CGCC               TTCATGGTCGTCGTG  45 451
CWR61_RS13870 NONE
CWR61_RS13875 NONE
CWR61_RS13880 2909644 .. 2909673 +  -6.3  -3.02263   CCCTGGCGCGCCGCC       TGACGCGCAAGTC CCTG GACTGACGCGCCA        TGTTCGCCCGCCTGT  48 3
CWR61_RS13885 NONE
CWR61_RS13890 2912314 .. 2912340 +  -5.7  -3.55444   GCCGCTACGGCCGTG        CGC-GCCCCAGG ATTT CCCGGCGCAGCG         TTTCGAGGATGCGGC  55 43
CWR61_RS13900 2913857 .. 2913899 + -15.5  -3.14344   CCGCGCCCAGCGCCG TGCGGGCTGCCAGGCTGCGC GCCA GCGCGGCC-GGCAGGCCGAG TTGCTCGCCGGCCTG  77 235
CWR61_RS13910 NONE
CWR61_RS13915 NONE
CWR61_RS13920 2917901 .. 2917921 + -16.1  -3.45571   GCCCAGGCACGACCA            GGCGCCCGT CAT GCGGGCGCC            TTGCTCTTTCGCCGA  90 60
CWR61_RS13935 NONE
CWR61_RS13940 NONE
CWR61_RS13945 NONE
CWR61_RS13950 NONE
CWR61_RS13960 2925383 .. 2925417 + -20.7  -2.71681   CCACCAGGGCGTCGA    GGC-CGGCGCCGGCCG AGCG CGGCAGGCGCCGCGCC     TCCTTGGCCACATTG 100 54
CWR61_RS14020 2937516 .. 2937563 +  -6.2  -2.55544   AGGTCATCAGCAGCG CCATCGGCGTC-ACCGTGACCTG GCC CAAGGCGTAGTTGAAGCCGATGG TCACTTCGGTGATGA  45 250
        sulP NONE
CWR61_RS14045 NONE
CWR61_RS14050 NONE
CWR61_RS14065 NONE
CWR61_RS14075 2951787 .. 2951809 +  -2.6  -3.28791   GCTCGAACAACACCT           CGCCGATTCG GGT TGAGTGGGTG           TTGTAGCAGACCAAT  44 399
CWR61_RS14135 2967513 .. 2967535 +  -5.5  -3.53811   CAGGCCGATCACCTG          GCCGCTGGCG CCGG CGCT-GTGGC           TTTCGAAGCGATGGG  54 205
CWR61_RS14175 2975630 .. 2975670 +  -2.3  -4.07618   CGTATCCCGATCCAC CGGG-GCACCGCGCGGCC CGCGCC GGTCGCGCCGCCAACCCG  TTTCCTTGTTCCAGG  58 156
CWR61_RS14180 NONE
CWR61_RS14185 2978012 .. 2978047 + -13.2  -2.89564   ATGTCGCCGCATCGG    CCAGGGTGCCTGTCCC CACT GGGACAGGCACACCGC     TCTATGCCGTGAACG  69 50
CWR61_RS14210 NONE
CWR61_RS14215 NONE
CWR61_RS14220 2995077 .. 2995103 + -17.3  -4.91852   AACCCTCCAACCCGA         CGGACGCCGGC CAAAA GCTGGCGTCCG         TTTCTTTTTCCTCCC 100 96
CWR61_RS14280 NONE
        recJ 3014534 .. 3014547 +  -3.7  -2.73875   TCGAGCACGCCGCCT               GAGCG CCGC CGCCC                TCCTGTTACAAACCG  42 24
CWR61_RS14290 NONE
CWR61_RS14295 NONE
        lysS 3018063 .. 3018112 +  -4.1  -3.10905   GACTGACCGGCGCCG GC-CCGCCATGCTTGCCAAGATCA TCC TGCTTGCCGCATGCGTGGCGGCGC TTGCCTACCTTCTGC  45 35
CWR61_RS14305 3018494 .. 3018507 +  -9.5  -3.36492   AATCGCCCGGCGCCA               GCCGC CCCT GCGGC                TTGTACCATTGCACG  63 111
CWR61_RS14345 3027075 .. 3027116 + -10.9  -2.70932   GCGATCTGCGCGTCG CCGCCC-AGGG-GC-CCGCT CAGGT AGCGGTGCACCCACGGGCGG TCCTTCGGCCAGCCG  59 262
CWR61_RS14405 3037739 .. 3037767 + -21.9  -4.15508   CACCCGGCCGGCATC        GAAAAGCGGAGCC CCT GGCTCCGCTTTTC        TTTTGCGGCTTGCTT 100 48
        lexA 3038548 .. 3038562 + -12.8  -4.74103   CTACGCGGGCTTGCT               GCCCCC CAA GGGGGC               TTTTTGCCTTGGGAC 100 75
CWR61_RS14480 3052702 .. 3052726 + -22.9  -3.57792   AAGCCGGAAAAAAAA          CCGGGCCCGGA TTA TCCGGGCCCGG          TTTGCGGGTCGCTGG 100 40
CWR61_RS14505 3059575 .. 3059600 + -19.1  -5.14563   GCCACGCGACAAAAA         GCCCCATTGCC TTGC GGCAATGGGGC          TTTTTTCGTGCGGCC 100 45
CWR61_RS14540 3064081 .. 3064118 + -16.4  -4.56597   CACGCGTGCGCAGTC   GG-ACTGCCGCCATCCC CACAA GGGATCGCGGCAGTTCC   TTTTTGGGCAGGGGG 100 69
CWR61_RS14550 NONE
        dapD NONE
CWR61_RS14560 NONE
CWR61_RS14565 3068511 .. 3068521 +  -4.6  -2.64912   GCGAACAATTGAACA                 CGTG ATA CGCG                 CTTCTGGCTTGACCC  43 21
CWR61_RS14570 3070594 .. 3070620 +  -5.7  -2.78384   TCCCCCTTCATTATC        GACGC-CGCCGC TGCC GCGGCGCGCCAC         TCTGATGCGCGGCGG  46 182
CWR61_RS14575 3073884 .. 3073898 +  -7.1  -3.53012   TGCGGCTTTGCGCCA               GGCTG AGGTA CAGCC               TTTCCCGCGCCCGCG  58 491
CWR61_RS14590 3077858 .. 3077870 +  -6.2  -4.25104   GGCCAGGAAGCGCTC                CGCC TGCTC GGCG                TTTTCCTCGGCCAGC  72 265
CWR61_RS14605 NONE
CWR61_RS14610 NONE
CWR61_RS14615 3084222 .. 3084235 +  -9.5  -2.57564   ACCACCTTGACAGGC               GGCGC CGCC GCGCC                CTTCTCCCACCATGC  55 105
       coaBC 3085621 .. 3085676 +  -9.6  -3.33315   CCTCGATCAGCGAAT GCGACAGC-GATAGCCAGGCCAGCGC CAGAAA GCGC-GGCCGGGCTTCCAGCTGCTGC TTCTCCGCCTCTTCG  63 191
CWR61_RS14630 3087304 .. 3087356 +  -5.2  -3.53811   CAGGCGCTCATGCAG CGGCACGCCGGCCAGCGCCTGGCCG ACGT CGGC-ATGCAGGGGCAGGCGCGCCA TTTCCGGAGGCTGGC  54 298
CWR61_RS14640 NONE
CWR61_RS14645 3089400 .. 3089421 + -12.9  -3.16267   GCTTTTCCGTCCCAT           ACCGGCGCC TCTG GGCGCCGGC            TTCACTCTCGTTGCC  72 72
CWR61_RS14650 3090020 .. 3090032 +  -3.3   -3.8647   GCGTGCGGTCCGAAC                TGCGC TCG GCGAA                TTTCATCTGATGGGT  58 150
CWR61_RS14685 NONE
CWR61_RS14690 3096149 .. 3096166 + -12.7  -3.01712   ACGCAACGAGAAAAA             CGGCTCC GCAG GGAGCCG              TCTTGCCGCGCCGCC  71 151
CWR61_RS14725 NONE
CWR61_RS14730 3104231 .. 3104245 +   -10  -2.52516   ACATCACGTCCATGA               TCAGGC GGC GCCTGA               ATTCGTCGTCGGCCG  55 276
CWR61_RS14740 3106096 .. 3106107 +  -2.2  -3.41878   ATCGGCGCGAATCCG                GCAGG CGC CC-GC                TTGTCGGTTGCGCCC  47 288
CWR61_RS14755 NONE
CWR61_RS14760 3110215 .. 3110265 +  -6.1  -3.03038   AAGCCGGGCACTGAC CGATCCGG-ACGTCCCGCTGGCG AACGAAG CGCCAGTGCG-CGTGCTGGGCCG TGTGATTTGAGTCTG  48 47
CWR61_RS14765 3111631 .. 3111659 + -13.9  -3.14344   CCAGTCAAGCAAAAA        GGCCCTTAGGAGT GGG ATCCCTAAGGGCC        TTCCTGGCACCGGTG  76 89
CWR61_RS14770 3112491 .. 3112503 +  -4.7  -4.09963   ACTATGTCAATGAAT                GCCTC ACG GCGGC                TTATTGTTCTTCAGA  64 254
CWR61_RS14850 3128595 .. 3128613 +  -7.3  -3.96148   TCGCGCGGCTTGCCG             CCCGGAC TTACT GGCCGGG             TTTCTGCTCGGCAGC  70 52
        mobA NONE
CWR61_RS14915 NONE
        mobB 3142192 .. 3142204 +  -3.3  -4.36914   GGCGGCGCATTGCCG                TCGGC CGC GCCCA                TTTTCTGCCACAGCG  67 162
CWR61_RS14940 3148982 .. 3149002 +    -9  -3.53012   CGCCGCGGCCGGTCA            GCATGACG ATCCC CGTCGTGC            TTTGCGCGCGCAGGC  61 483
CWR61_RS14960 3152596 .. 3152616 +  -2.5  -3.31144   GCCCCGGGAGGAACA            TCATGTTGA AAG TCAGCGAGA            TTCTGCGCGTCAAGG  45 60
CWR61_RS14965 3153106 .. 3153135 + -15.7  -3.14132   GCAAACGTCGCGCTC       GCGCGGCGC-GCCT TGC AGGCTGCGCCACGC       TTCATACAACAGCGA  77 75
CWR61_RS14975 NONE
CWR61_RS14980 NONE
CWR61_RS15105 3180154 .. 3180186 +  -3.1  -4.07568   CCCGCCAGGAAGCGG      GCCTGCCGCGCATAC GCG GCGCGATCGGCGGGC      TTTTCGCCAAAGCGC  58 178
CWR61_RS15120 3182741 .. 3182791 +  -7.2   -4.0162   CCGAGTTTCGCGCCG CCGCAGCGCTCGCTGCTGGGCGAG ATC CTCGACTGGATGCTGGCGCCGCTG TTTCTCCTGTGGCCC  67 105
CWR61_RS15125 NONE
CWR61_RS15130 3186056 .. 3186070 + -11.4  -6.06723   ATCCGGCTTTTTCAA               GCTCCC ATA GGGAGC               TTTTTTTTTGCCGCC 100 75
CWR61_RS15175 3195357 .. 3195374 +  -2.5  -2.93435   TGCATCTCAGCCCTC             ACGGCGC CCCG GCGCCCA              TCTCTCCATGCTTGC  41 138
CWR61_RS15180 3196810 .. 3196832 + -19.2  -5.53288   TGCGTGCCCCGTACG           GGCCCGACAC GAT GTGTCGGGCC           TTTTTTTGCCTTGGG 100 266
        rdgC 3198603 .. 3198628 +  -6.7   -4.4767   GTAAATGACGTCCGC         GCCCGCCAGGCC CTC GGCCAG-CGTGC         TTTTCTGCTCGATCA  75 434
CWR61_RS15215 3201647 .. 3201694 +   -22  -4.15788   CGATCCGGCGCCAGT GCGGCTGAGCACGCCG-GCGGGC GCC GCCCGCGCGCCCTGCTCAGCCCC TTTCTTGAGCACCTT 100 18
CWR61_RS15230 3202780 .. 3202792 +  -4.8   -3.0094   ATGCCGCAACAGGCA                CAGC AGCAG GCTG                TCTGTATCGATACAG  46 69
CWR61_RS15235 3204340 .. 3204364 +  -2.7  -3.78934   CGCGCTGCCCGCTCC          CGAATTGCCCG CCC CGGACAAGTCA          TTGTTCTGGCGAGGA  53 41
CWR61_RS15245 NONE
CWR61_RS15250 NONE
CWR61_RS15255 3206437 .. 3206495 +    -6   -3.7282   AGGCGGAGGACTGGG TGAGGTAGGCCGTGATCAGCACCGGCGCG CCAT CGCG-CGGC-CAGATCAC-GCCGACATCG TTATTGGTGCCATGC  61 136
CWR61_RS15265 NONE
CWR61_RS15270 NONE
CWR61_RS15275 NONE
CWR61_RS15280 3209981 .. 3210030 +  -9.9   -2.5655   TGCACCAGATCCTTG GCCTGCGGCGACGCGGTGT ACAGCTTCGACA GCGTCGCGTCGGCGCCGGC GTTGATCTCGCTGCG  55 525
CWR61_RS15290 3212064 .. 3212096 + -11.4  -2.87132   GAAATAGTTGCCCAT     CC-TTGCTATGCCTC AGCA GAGGCATAGCATCGG      TATGTGCAACACGCG  64 39
CWR61_RS15300 3214569 .. 3214607 + -17.7  -5.52023   TTTTTCAACGCACTT  GT-ATCTACCTACAGCCC CCAG GGGCTGTAGGTAGATCGC   TTTTTTGTTCCTGCT 100 74
CWR61_RS15315 3216373 .. 3216400 + -11.3  -4.59773   CAAGATTTTCCATCA        GCACGGCCTAC CTTCGC GTAGGCCGTAC         TTTTTCCAACTAGGC  93 43
CWR61_RS15320 3216916 .. 3216929 +  -4.5  -3.86106   GGAAAGCTCTTTGTC               GGGAG AGCC TTCCC                TTTCGTACTTAATCT  58 54
CWR61_RS15335 3219504 .. 3219537 + -19.7  -2.50016   AAACGCCAGAAAGGA     CAAGGGCCCACAGTC TTGC GACTGTAGGCCCTTG      ATATTGCTGGTCGGG  89 125
CWR61_RS15385 NONE
         amt 3229238 .. 3229259 + -13.7  -5.14563   CTCCCCGCGACACGA           CCGGAGTCG GCAA CGGCTCCGG            TTTTTTCCTGCCCGG 100 53
CWR61_RS15400 3231456 .. 3231468 +  -6.2   -3.4252   GTCGGCATGCTCGAG                CGCC AGACG GGCG                TTCTGCTCGATCAGC  55 206
CWR61_RS15470 3254756 .. 3254776 + -15.4  -5.13343   GTCGTTATCATTTGA            GGCGGGGC TGAAT GCCCCGCC            TTTTATTTTGCATTG 100 92
CWR61_RS15475 3255358 .. 3255373 + -10.4  -4.62069   CCGGAACGCAAAAAA              GGAGCC TTAC GGCTCC               TTTTTGCCATGCCCG  91 81
CWR61_RS15500 NONE
CWR61_RS15505 NONE
CWR61_RS15510 3262710 .. 3262735 + -18.3  -3.60865   GCCCTGAGACCGCGA         CGCCGG-CGCGC CCC GCGCGACCGGCG         TTCTGCTTTAGAATC  93 34
CWR61_RS15515 NONE
CWR61_RS15520 3263801 .. 3263817 +  -2.1  -2.64099   AAACAAACCCATCAG              GAGCCCC CAT GCGTCTC              ATTCTGCTCGGACCG  38 108
CWR61_RS15525 3264471 .. 3264529 +  -9.4  -3.39895   GCAGAGCTAAACCGC GCCGCG-AGGCCGCCGCGCCGCC-CTCGC AGGG GCGCGCGGCCGCGCG-CGCCCTGCCCGCC TTCATTGCTAGCCAA  64 31
CWR61_RS15530 3265328 .. 3265350 + -16.3  -3.56972   TAAGCCCTCCCCCGA           CGTGCCGGC CCGAT GCCGGCACG           TTGCTTTGGTACCCT  91 38
        murJ 3266981 .. 3267013 +   -12  -4.20516   AATAGTGAAAATCAC      AACAAAGACCGGCC TTTAC GGCCGGTCTTTGCA      TTTATTGGATCGACA  95 74
CWR61_RS15540 3268193 .. 3268216 +  -6.8  -3.58037   GGGCTTGCAATCCCC          GTCGGAC-TTG ATA CAATGTCTGAC          TTTGCCGAATTCATA  59 72
CWR61_RS15545 3268552 .. 3268569 + -11.3  -5.45802   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC 100 69
CWR61_RS15580 3276486 .. 3276508 +  -6.8  -3.53012   AGCTCGAATAGACGC           GCTCGCCCCG GCC TGCGGCGCGC           TTTGGCGCACCGCAG  57 30
CWR61_RS15585 3277552 .. 3277590 + -18.3  -3.73224   GGACGCCAGCCCATT  GCGCGCCAATC-CCGC CCAATGAA GCGGCGATTGGCGCGC   TTTCCTGGACAATCC  93 40
CWR61_RS15590 3278468 .. 3278478 +  -2.4  -3.01497   AATAAAGCAGCCGGG                 GCGG GAA CGGC                 TATGCTTTCGGCTGC  41 36
CWR61_RS15595 3279843 .. 3279861 + -11.6  -3.59979   CCGCCCTCGGACAGG             CGCCGGCC CAC GACCGGCG             TTTCGGCTGGCGGGC  74 439
CWR61_RS15605 NONE
        argF 3282190 .. 3282214 +    -5   -2.7676   CCCGTTAGACTTCTT          GTTTGACGGC CCGTT GCTGTCAAAG          TCCTGTTGGCGTTTC  44 104
        argG 3284067 .. 3284088 + -11.5  -3.23216   GAGGTTGTGCAGCAG           CGCCGGCGG CACG TTGCCGGCG            TTCATGGTCATGAAG  64 515
CWR61_RS15650 3290153 .. 3290177 + -18.7  -3.66999   GACCCGGTTTTGTTA          GGCAAATCGGC AGC GCCGATTTGCC          TTTGCGTCCATCAGT  93 145
CWR61_RS15685 3296587 .. 3296615 + -13.2  -4.32857   CCTGCCTTCATGAAA       GCCCCGGTCGATC GCAA GATTG-CCGGGGC        TTTCTCTTTGCGGCG  95 64
CWR61_RS15695 3297540 .. 3297562 + -12.7  -5.63517   TGATGCGCCAAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGGC 100 65
CWR61_RS15705 NONE
CWR61_RS15710 3300501 .. 3300511 +  -4.6  -2.92371   CCAGCCAGCCGTAAA                 CCGG CAT CTGG                 TATGGTTGCCTCCAT  46 53
CWR61_RS15715 3302428 .. 3302460 +    -9  -3.05844   CCATGTTGCTCGACC      CGACGGTGGACCAC ACGCC GTCGACCACCGCCG      TCTTGGCATGCAGCA  55 244
        egtD NONE
        egtB 3306944 .. 3306958 +  -4.2  -3.14284   AGAATTTCGTTCTTC               GTTTGG CAG CCAACC               ATTTGTTGATGCCAA  45 78
CWR61_RS15740 3307074 .. 3307105 + -21.8  -4.25848   AGAGAATTTGCAAAA      CAAAAGGCCCGCAA GCGA TTGCGGGCCTTTTG       TTTTGCTCCGCAATT 100 40
CWR61_RS15760 3308825 .. 3308862 +  -4.6  -3.58536   CCGCGCCAGTCTAGC   GCCGCGACCG-CCGCGC CATTC GCGGGGACTGAGGCGGC   TTTGGCCGTCAATTT  54 312
CWR61_RS15770 3309608 .. 3309631 +    -3  -4.11216   ATCGTGGACATAATC          GGCGC-CAGGG CCA CGCTGGGCGAC          TTTTAAGCGTAACGG  60 109
CWR61_RS15775 3311108 .. 3311119 +  -3.6   -2.7035   ATGGCGCGGTCCGGC                CGGC ACTA GCTG                 TGATGTCTCAATAGG  40 17
CWR61_RS15780 3312563 .. 3312575 +  -3.3  -3.01791   AAGCCGCGCGTGCCC                GGCAC GCA GTGCA                TGTTCCAGCGCACGT  43 435
CWR61_RS15800 NONE
CWR61_RS15805 3316439 .. 3316454 + -10.4  -4.00532   CAGGACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTCGTGTTTGCGGG  78 54
CWR61_RS15820 3319178 .. 3319197 +   -15   -4.8622   GCGCGCAATGAAAAA            GGCGGCTC GCAC GAGCCGCC             TTTTTCATTGCGAAG 100 49
CWR61_RS15840 3323387 .. 3323416 + -11.4  -3.53811   CGACTAAGCGCGCTC       TC-CCCCCCCGCC CTTGC GGCGGGGGGCCGA       TTTCCAGCACCTGCA  72 34
CWR61_RS15845 3324367 .. 3324395 + -16.8  -5.41143   GCCCGCCATGCAGCC       GCCCCGTTGGACG ACCA CG-CCAACGGGGC        TTTTTTTCGCCGGTC 100 78
CWR61_RS15850 NONE
CWR61_RS15855 NONE
CWR61_RS15860 3327669 .. 3327697 +  -5.1  -3.04144   GAATACCGTCATGCC        CCATGCGGCGCGA AAG TGGCGCTGCAGCG        TATTGACGCTCAGGC  46 252
CWR61_RS15870 3330860 .. 3330870 +  -6.8  -3.31144   CCTATTACGCCACGG                 CGAC GGT GTCG                 TTCTGAACATGGCGA  55 9
CWR61_RS15875 3332254 .. 3332270 +    -5  -3.15544   ACTCCTTCACCATGG              CGCCGC AACCC GAGGCG              TTCATGACGATGGCC  47 489
CWR61_RS15900 3350351 .. 3350388 + -14.2  -3.61398   GCGAAGCGGCCTTGA   TGGCGTCGACGGCGAT CTTCAC ATTGCCGTCGGTGCCG    TTCTTGAAGCCGACC  78 524
CWR61_RS15920 3354026 .. 3354045 + -16.4  -5.24129   TCGTCCCGGAATGCC            GGCGCGCC CCAG GGCGCGCC             TTTTTTATCGCGCCG 100 50
        pepN 3357586 .. 3357598 +  -3.3  -2.74192   AAAGCCTTGGATCTG                GCTGC TTA GGAGC                TACTCTTGAAACGTA  40 17
CWR61_RS15935 3358652 .. 3358676 +   -20  -5.03314   GCCAGCATGAGAAAA          GCCCGCCGGC ATCGC GCCGGCGGGC          TTTTTTCGCGGTCCG 100 45
CWR61_RS15960 NONE
CWR61_RS15965 3364193 .. 3364205 +  -3.3  -3.07233   AGGCCGCCAAGAGCA                TCGGC TAA GCCTA                TATTGCCCATTGTCA  43 18
CWR61_RS15970 3365958 .. 3365971 +  -9.5  -5.75945   ATCCATCCCGGAAAA               GGCCC CGCG GGGCC                TTTTTTTTCGGCCCT 100 46
        pdxA NONE
CWR61_RS15980 3368519 .. 3368549 + -11.1  -3.06183   CCAGCTGCCCGCACT      G-GCGCGCCAGGCGC CGC GCG-CGGGCGCGCAC      TTCCATCGAGCTGAG  62 458
CWR61_RS16040 3378414 .. 3378432 +  -5.8  -3.14931   CCGCCCCGGGGCCCG             GCGCTGCC ATC GGCCACGC             TTGCTAACGCCTCGA  49 98
CWR61_RS16045 NONE
CWR61_RS16050 3381287 .. 3381339 +  -8.3  -3.93061   CGTGTCCTGCGTGGA CC-G-GCCCCTGCCCGCGCTCGCGCG CAAC TGCGCG-GCGAAGGCGGGGTCGCAGG TTTCGGTTTTCAGGT  70 477
CWR61_RS16060 NONE
CWR61_RS16065 3384784 .. 3384829 +  -2.6  -3.28712   CCCCGCGGCGACTGG CGCCG-GCGG--CCG-CTAGGC GGCTCA GCCCAGGCGGGCCCGCACGGTG TTCTCGCCCACGGCC  44 10
CWR61_RS16095 NONE
CWR61_RS16100 3392445 .. 3392463 +  -5.8  -3.64703   CCGGGATACAGGCGC             GAGCCGGC CAG GCCGGCGA             TTTCCATGGCCAGCA  57 112
        htpX 3395198 .. 3395219 + -18.7  -3.35679   GTCCGCCAGCGCAAA           CGCGCCCCG TACA CGGGGCGCG            TTCTACATGGGCCGA  93 55
CWR61_RS16130 NONE
CWR61_RS16135 NONE
CWR61_RS16140 NONE
CWR61_RS16145 NONE
CWR61_RS16150 3403434 .. 3403489 +  -5.5  -2.82623   GATTGGACGCCACCA CCACATCGAACCAGTCCGGGTGCTGCAC GAA GTGC-GCGCACAGGATG-T-CGATGTGG TACTTGTCCCAGCGC  44 402
CWR61_RS16165 NONE
CWR61_RS16170 NONE
CWR61_RS16175 NONE
CWR61_RS16180 NONE
        gabT NONE
CWR61_RS16190 NONE
CWR61_RS16195 NONE
CWR61_RS16200 NONE
CWR61_RS16205 NONE
CWR61_RS16210 3417862 .. 3417881 +  -6.3  -3.02043   GCCGGTGACCGGCTC            GCCGCGC AGGAAG GCGCGGA             TCTTGGCCGCCAGTT  48 78
CWR61_RS16220 3420598 .. 3420634 +  -7.8  -3.53444   CCGATGCCCGGCATG   GCGGCGTCGAAC-GCCG CGGC CGACAGCGCGGCGCCGC    TTTCACCGCCGGTCC  58 364
CWR61_RS16235 3424122 .. 3424139 + -14.1  -4.11484   AGCGCAATAACCGTC             CGGGCGG CGTG CCGCCCG              TTTTCCGGCCTTGCC  93 31
        purD NONE
CWR61_RS16245 NONE
        nadD 3427069 .. 3427081 + -10.5  -3.93489   TCCGCCACATTGACA                CCCGC GCC GCGGG                TTATATTTATCGTTA  75 60
        rsfS NONE
        rlmH NONE
CWR61_RS16265 3428721 .. 3428779 + -13.4  -2.54896   CCTGCCCGTCTATCG TTTATGGCGTGCGACGGTGTGCCTGTCCC AGTA GGGACAGGCACAC-GTTGC-CGC-AGAGG TCAGTTCCATGCCGG  67 147
CWR61_RS16295 3437279 .. 3437302 +  -5.9  -4.09864   ATCACGTCGTCCGGC          GCCGC-CGCC AGGTC GGCGCGCAGC          TTTTCCCGGGTCCAT  66 224
CWR61_RS16305 3439628 .. 3439686 +  -8.5  -3.57144   CCGCGTGGCACTGGC GGCCACGGCCTGGGCCGCGGCCCCGCCG CTGG CGGCCGGCACGCGCCTGACGCCG-GGCA TTTCGCGCTCCACCC  65 458
CWR61_RS16330 NONE
CWR61_RS16335 3445785 .. 3445817 +  -5.5  -2.78384   GTTCGTCTACTGGCT     GCGCGGCTGGGTGT AACGCC ATGCCC-GCCACGC      TGTCGTGCCGGCCCG  46 10
CWR61_RS16340 3446136 .. 3446174 + -19.7  -3.01712   AGCTGACATCCGCGG  C-GAGGTGTGCCTGTCCC CACT GGGACAGGCACACCGCAG   TGTTGACGGGCGCCG  93 84
CWR61_RS16355 3450195 .. 3450214 +  -7.8  -3.28712   CCGGCACGACCCAGC            CATCCCGG CCCG CCGTGATG             TTCTCGGGCAACCCG  55 186
        lpxO 3458780 .. 3458809 +  -6.4  -3.59979   CACGCCCAGTTGCTG       CTGCAGGTCGGCA TAGGC TGCCG-CATGCGG       TTTGGCCTGCGGCAG  57 459
CWR61_RS16395 NONE
CWR61_RS16400 3464240 .. 3464255 + -11.8  -4.90266   CGCCCCCCTTCGCAA              CCGGCC GGCA GGCCGG               TTTTTCATTGATGCC 100 55
CWR61_RS16405 3466193 .. 3466208 +  -8.2  -3.34233   CGGGTCCGGGATGGA              GGCCGG CGTT TCGGCC               TTCTCGGCCTTGTCG  59 69
CWR61_RS16430 NONE
CWR61_RS16480 NONE
CWR61_RS16485 3482283 .. 3482296 +  -3.7  -3.07994   TGCGCAACGACGCGC               AGGGC TGAA GCCCG                TTCCATCCCCTTCGA  45 18
CWR61_RS16490 3483744 .. 3483757 +  -2.3  -3.08046   CTTCCATCGTTGTAT               AGGCT TCCA AGCCA                GTTTTCGCATGAAGC  42 161
CWR61_RS16495 NONE
CWR61_RS16500 3485239 .. 3485249 +  -8.2  -2.73681   CTCGATTCACGTCCA                 GCGC TTG GCGC                 TCCTTACCATCGATA  53 121
CWR61_RS16505 3485967 .. 3485979 +  -6.3  -2.71364   ATGGCGGCATGAATC                CTTAC CAC GTAAG                TGATTCCCGCCGTCG  46 108
CWR61_RS16510 3487173 .. 3487198 +    -4  -3.15249   TGAGGTCGCGCGTGC         GGTAGCGGATG ATGGG CATC-GCTTCC         TTGGTCAGCGATGTG  45 477
        paaX 3496439 .. 3496464 +  -4.6  -3.61398   GCGCCCGCAGCAGCG         TGGCCGCCAC CAGCGC GTCGCCGCCA          TTGTTGCCCGGCCCG  54 497
CWR61_RS16575 NONE
        rsgA 3499785 .. 3499801 +  -4.4  -4.45664   CGTCCGACAGGGTGA              CGTCGA CGCTC TCGATG              TTTTCCTTCAGTTGC  70 397
CWR61_RS16595 3502473 .. 3502494 +  -6.6  -4.33153   AATTCGGTTACGGCA           TTGC-CGCC GGTGA GGCGAGCAA           TTTCTTCCTGTTCCA  75 275
CWR61_RS16605 3503916 .. 3503964 +  -3.6  -3.59979   CAGGCCGGGGCTGGC TGGCCGTGCAAGGCTGCGCC TGGCCCGGC GGCGTCGGCGGGAACGGCCA TTTGCGCTGCGGCAC  51 233
        mltB 3519470 .. 3519526 + -26.6  -2.52464   CGCACAGGCTATTGA CGC-CGTCCTGCCGCGGC-TCGGCCCGC CAC GCGGGCGGACGCCGCGCCCGGACGCGCG TCAGTTGAAGACGCC 100 26
CWR61_RS16755 3535913 .. 3535933 + -18.3   -5.4505   GCCGCTACAATGAGG            GGGCCTCGC ATA GCGAGGCCC            TTTTTTCTTGCCGCG 100 52
        ubiG NONE
CWR61_RS16765 3537460 .. 3537502 +  -4.2  -4.33907   CGCGTCGGCGCCATC CCCGGTCACGGATTGTTCCC TCCAT GCGAACAGTCC-TG-CCGAG TTTTCCCTCTTTATC  69 73
CWR61_RS16770 NONE
        ssrA 3539251 .. 3539273 + -14.9  -5.27335   CTCCACCAATTTCAA           GGGCTCGGA TAATC TCCGAGCCC           TTTTTCTTTGCAGGC 100 33
CWR61_RS16785 3541362 .. 3541385 +  -3.6  -3.01712   GCGCCCGGGCGAACG          GCGCCGCGCC ATGA GGCTCGGCCA           TATTCAACAGGAGGG  42 56
CWR61_RS16790 NONE
CWR61_RS16795 NONE
CWR61_RS16800 NONE
CWR61_RS16805 NONE
CWR61_RS16810 3546119 .. 3546146 + -11.9  -2.78816   CCAGGCCGGTGGACC        GGGCGGACGGG GGCCGG CCCGCCTGCCC         TATACTGGCGCCTGC  66 51
CWR61_RS16815 3546844 .. 3546860 +    -8  -3.78034   CCGGCATGGCGGCCG              CGCACT CGATC AGTGCG              TTCTTCATGTCCATG  64 109
CWR61_RS16825 NONE
CWR61_RS16830 NONE
CWR61_RS16835 3551054 .. 3551089 +  -8.3  -3.54543   GGCCGGCTCACGCCA   CCGT-GGCCTTG-CCGG TCAG CCGGGCAGGGTCGGCGG    TTTCCAGGAATACCT  62 86
CWR61_RS16850 NONE
        tcuB NONE
        tcuA 3556802 .. 3556823 + -18.7  -4.08767   GCCGCCTGAACGCAA           CGGCCCGCC TTGC GGCGGGCCG            TTTTCCGCAGCTGCG 100 32
CWR61_RS16890 3564074 .. 3564093 +  -6.3  -3.54743   ACTGGATGACCTCGT            CCCCGGC GGCGTG GCCGTGG             TTGTCGTTGATGGTC  57 429
CWR61_RS16900 3566528 .. 3566542 +  -8.5  -2.70932   ACCGAGTCCAGTTGC               GCCGG GGTCA CCGGC               TGGTTGGGCCCGGCG  52 250
CWR61_RS16920 3570228 .. 3570263 + -20.4  -2.53015   AACCTGACATAACCT    TCCGGTGCCTGTCCCC GCAT GGGGACTGGCACCGGC     TAACTTCCCGCCTGT  91 34
        cphA 3576063 .. 3576083 + -15.4  -3.61398   TTCGCCCCTATTGCC            GCGCCGCC CGAAC GGCGGCGC            TTCTTCGACGACAGG  90 50
        cphA 3578741 .. 3578758 + -14.1  -5.28176   CTCAATTGTAACTAG             GGCCGGC GCAA GCCGGCC              TTTTTTCTCCCTGCG 100 84
CWR61_RS16945 NONE
CWR61_RS16950 NONE
CWR61_RS16955 3579786 .. 3579806 + -12.6  -6.15828   GCCGTACGTGTACAG            CCTTCGGG TTCGC CCCGAAGG            TTTTTTTTTGGTGCC 100 74
        bamD 3590022 .. 3590052 + -24.2  -3.53761   CGCCCGAGCCGTCCA       TGGAAAACCCGGCC CCA GGCCGGGTTTTCCA       TTTGCGCGGCCGTTA 100 44
CWR61_RS17020 3594685 .. 3594725 + -20.5  -2.57468   TCAAGCGCTGATCAC GACACAGGCGCCGC-CCC ATCGTC GGGTGCGGCGCCTGCGTC  CTTGCTCTGCTGCCC  91 30
CWR61_RS17060 NONE
CWR61_RS17065 NONE
CWR61_RS17070 3605756 .. 3605776 +  -3.1  -3.14463   CAGCACCAGGCCCAT            GCCCGCATG GAT CGTGCCGAC            TTCCTCGCAAGCCTT  43 265
CWR61_RS17080 3607632 .. 3607659 +  -3.2  -3.58343   AAATCGAACCACACG        ACCGAGCCC-GCC AGC GCCTGGGCGCGGA        TTTCGCGATGCTCGA  51 366
        mdeB 3620009 .. 3620038 + -21.5  -2.61582   GCAATCCTGACGACG       GCTCCGGCC-GGGC CAC GCCCTGGCCGGAGC       ATTGTCGCTGCAGTG 100 31
CWR61_RS17120 3622445 .. 3622482 + -26.4  -2.52464   GAAGGCTGAAACTGA   GGCGGTGGCCCGGCGCC ATGAC GGCGCCGGGCCAC-GCC   TGACTTGACCCAGGC 100 32
CWR61_RS17125 3623254 .. 3623297 +  -3.6  -2.63631   GTGATGCACGGTTCC CGCCCGCCAGGTTGCCCGAG CGGG CTGCGGCAACCTTCCCGTCG TACTATCGAGGTTGA  39 37
CWR61_RS17130 3623841 .. 3623861 + -10.3  -3.28924   GGCGGGCAGGCGGCC            CGCTGCGGC GCG GCCGCGTCG            TTCTCGCCCACGGTG  65 61
CWR61_RS17175 3632142 .. 3632163 + -14.4  -3.53224   CCGGCATTGCCGCCA           CGGGCCCG CGCAGA CGGGCCCG            TTTCGCAGGACCGTC  81 42
        prpB 3633279 .. 3633314 + -14.7  -2.60065   GCAAATCGCAATAAA   GGGCGG-CGGCG-CGGC ACGA GCCGCCGCCGGCCCCCC    CTGTGTTTATCCCAT  74 27
CWR61_RS17185 NONE
        acnD NONE
        prpF NONE
CWR61_RS17200 NONE
CWR61_RS17205 3640466 .. 3640479 +  -3.9  -3.53012   TCACGCTGGTTGTCG               TCAAA CCCT TTTGA                TTTCCGCGCCAGCGA  51 12
CWR61_RS17210 3642007 .. 3642029 +  -4.6  -3.28712   GCAAGCCCGCATAGT           CGCCGGCACG TGG CGCAGCGGCG           TTGTAAAAGCGCCGC  49 27
CWR61_RS17215 3642481 .. 3642499 +  -7.4  -6.06723   AAGCCCCTTTTAAGA             CCCGCT CTAAACC AGCGGG             TTTTTTTTTGGCCGG 100 106
CWR61_RS17220 3643111 .. 3643124 +  -3.1  -3.84246   TCCTTCACGGAGGCG               TCATC GCGG GATGG                TTTCATCCTTGGGCA  56 62
CWR61_RS17225 3644026 .. 3644046 +  -8.3  -3.09492   AATAACCCTTATACG            TCCCCGT TAGGGAT ACGGGGA            TGTTGCAGTTCACGG  57 39
CWR61_RS17230 3645793 .. 3645803 +  -8.2  -3.09516   CCGCGAGGCCGAACG                 CGCC AGC GGCG                 TTCACTCCTGAAGAC  57 4
CWR61_RS17235 NONE
        hslO NONE
CWR61_RS17245 3648567 .. 3648583 +  -3.6  -3.35046   GGCCGGACTTGTCCA              CGCCGA AGGCC TCGTCG              TATTTGCCGGGCTCG  47 452
CWR61_RS17265 3652047 .. 3652080 + -25.3  -3.16742   CGGTAGACAGCGGTT     TCCGGCCGGTCCGCG CTAC CGCGGCCCGGCCGGA      TTACTGACCATTAAC 100 480
CWR61_RS17355 3671439 .. 3671485 + -16.5  -5.00884   CGGCATGTAAGCGCG GGCGCGCACGTGGGCGCC-GGCA GGA TACCAGGCGCCCTCGCG-GCGCC TTTTTTCCAGACCGT 100 31
CWR61_RS17360 NONE
CWR61_RS17365 NONE
CWR61_RS17370 3674170 .. 3674188 +  -8.8  -3.45023   GATGCCGTCCAGGCC             CGCGGC CAGCCGC GCCGCG             TTGTCGTGGTCCTGC  61 272
CWR61_RS17405 3682757 .. 3682773 + -15.1  -4.41494   GACGCCCAAGCAAAA              GCGCCCC GAT GGGGCGC              TTTTGCTTGGGCCTC 100 53
CWR61_RS17430 3688663 .. 3688675 +  -6.9  -3.02461   GGCCGCGGCGCGCGC                CTCGG CCA CCGGG                TCTTCGCCCGCCTTG  48 401
CWR61_RS17440 NONE
CWR61_RS17445 NONE
CWR61_RS17450 NONE
CWR61_RS17455 3692617 .. 3692635 + -14.6  -5.40072   TGCGCATCAGAAAAA             GGCTTGCC GGC GGCAAGCC             TTTTTTTCGCCCCCA 100 51
CWR61_RS17460 NONE
CWR61_RS17465 NONE
CWR61_RS17470 3696010 .. 3696057 + -13.2  -3.64822   GGTTGGCGATGCCCA CGCCGTGCCCGGCCAGCGCCAG TTGG CAGACGGTGGACGAGTACGGCG TTTCGATGGCGGCAT  78 228
         maf NONE
CWR61_RS17575 NONE
CWR61_RS17580 3714882 .. 3714902 +  -3.1  -2.77192   CAGCACCGCGCCGTA            GAGCAGCGG CTG CTGCAGATC            GTTCTTGCCGGCCTT  39 119
CWR61_RS17605 3721927 .. 3721953 + -23.8  -4.93898   TCACTGACGCAAAAA         GCGGGTTGCGGC GTC GCCGCAACCCGC         TTTTTCTCCTGCTGT 100 34
CWR61_RS17645 NONE
CWR61_RS17650 3732839 .. 3732876 +    -7  -3.28924   CCATGTCCAGCGAAG  CGTCGTCGGGC-ACCTGG CCAG CCAGGTAGGCC-ACGCCG   TTGTAGACGGCCATG  55 476
CWR61_RS17665 NONE
CWR61_RS17670 3735488 .. 3735531 + -10.3  -4.58685   GGTCGAAAACTACTG GTAATCCCCCCTATGGCGGG GGGAA TCCGCCATACGGGGG-TCGC TTTTTCGCAACATTT  89 22
        phaZ 3736888 .. 3736903 + -11.8   -4.2687   GCGGGCTCCCTGCAA              CGGGCC GCCT GGCCCG               TTTCTGCTTTTTACG  95 50
        rsxB NONE
         nth 3738277 .. 3738313 +  -2.3  -4.28713   GCCGTCGTGGAAAAC    ACCGTGAAAACCCTT GTTTCTG AAGCGTTTTGACGGA    TTTCTTACTGCTGTT  63 108
CWR61_RS17690 NONE
CWR61_RS17695 NONE
CWR61_RS17700 NONE
CWR61_RS17705 NONE
CWR61_RS17710 NONE
CWR61_RS17715 NONE
CWR61_RS17720 3745138 .. 3745171 + -19.5  -3.09516   GCTGACCTTCGCGCG     CGCCGCTGGCGCGGC CCGG GCCGCGCCAGCCGCA      TTCAGTCCTGGGCGC  93 36
        msrB NONE
CWR61_RS17765 NONE
CWR61_RS17770 NONE
CWR61_RS17775 3754382 .. 3754411 + -19.5  -3.57144   GGCCACCGCCAACAA       CAAAATTGCCCGC GAAT GCGGGCAATTTTG        TTTCCGGCTGCGGGC 100 47
        lplT 3762998 .. 3763026 +  -2.9  -3.74747   CAGCAGGGCGATCTG        GCGCCGCAGGTAG GGA TTGCAGGCGGCGA        TTTCCTCGGGCTTGG  53 278
        ompR NONE
CWR61_RS17815 3767208 .. 3767221 +  -3.1  -2.60075   TAGAATTTAGGGTTT               G-AGGC CTT GCCTGC               CTTAATTCCACCAAC  39 43
CWR61_RS17820 3767813 .. 3767829 + -10.8  -3.95584   GCTGTAATTTCCCCG              GCCCGG CTCGT CCGGGC              TTTCATTGCTCCAGA  78 34
CWR61_RS17825 3768420 .. 3768446 + -10.7  -2.71144   CCCCGCCGACGGCCG         CAGCCGGCCCC TGCAT GGGGCCGGCAC         TCATTCCCGCCCCTC  59 67
CWR61_RS17835 3770688 .. 3770702 + -11.4  -2.91274   TATCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 128
CWR61_RS17855 NONE
        serB 3777300 .. 3777344 +  -6.5  -2.70932   CCGCCGCCCGGCCGG C-CCGCGCCTTACTCCGGCTGG TTGC CCAGC-GGAATGGGGC-CGGCG TCCTTCACGAACCGC  48 144
CWR61_RS17870 3779367 .. 3779380 +  -9.5  -2.87132   GCACGCCATCGCCTG               GCCGG CCAC CCGGC                TATCTCCACACCAGA  58 49
CWR61_RS17875 NONE
CWR61_RS17880 3782092 .. 3782122 +  -6.9  -3.23216   GGTTGGAACGCGCGA      TCA-GC-GCCGCCAG GCG CTGGCGTCCGCCTGA      TTGATCGTGGTGCGC  50 149
CWR61_RS17980 NONE
CWR61_RS17985 NONE
CWR61_RS17990 3806316 .. 3806345 +  -9.9  -3.05463   ACAGCAGCGCCAGCG       TCATGCCCACCGC GACC GCGGTGAGCAAGG        TTCGATCGCCCAGGT  59 425
CWR61_RS18020 3812379 .. 3812412 +  -6.9  -3.09516   GGCAACTTCGCTTTG     ACTAATTATCCAAGA ACAT TCTTTGATAATTAGG      TTGCGTCATGAAAAG  51 105
CWR61_RS18025 NONE
        mexI NONE
CWR61_RS18035 NONE
CWR61_RS18040 3818990 .. 3819008 +  -3.1   -3.6284   CCTTGGTGTGCGCAA            GCACGCGCG TAT CGC-CG-GC            TTTCAGGTACTGGTT  50 218
CWR61_RS18055 NONE
CWR61_RS18060 NONE
CWR61_RS18065 3825647 .. 3825664 +  -2.5  -3.68351   AGGGCCCGCTGAACA             GCGGGCG CAGA CACCGGC              TTTCGCTCATCCACC  50 29
CWR61_RS18070 3826835 .. 3826849 +  -3.4  -3.28712   CGAAACGCCACGGTG               GGATCG GAC CGGACC               TTGTCCAGCAGACCG  45 116
        lrhA NONE
CWR61_RS18100 3834639 .. 3834674 + -10.5  -2.73875   GCCAGCACCTCCTGG   C-CCAGCGGCGTGCGGC GACC GCCG-ATGCTGCTGGCG    TAGTCTTCGGCGCCG  56 455
CWR61_RS18125 NONE
CWR61_RS18130 NONE
CWR61_RS18135 NONE
CWR61_RS18140 3842364 .. 3842378 + -11.4  -2.78679   CATGCGGCGTGCCGC               GGCAGG CAC CCTGCC               CTTTGAATCGAGAAA  64 47
CWR61_RS18145 3843558 .. 3843568 +  -8.2  -2.57344   ACGTCCGCGTTGGAA                 GGCG ACG CGCC                 CTTGTAGGGCACGTG  51 449
CWR61_RS18175 3850985 .. 3851022 +  -5.5  -3.05816   ACTGGGCAACCTGCC   GCAGCGAAGCGAACGCGT GCA AC-TGTTCGAGGCGCTGC   TTCCATGAACGCTCC  46 470
CWR61_RS18205 3856444 .. 3856454 +  -4.6  -4.07568   GGGTGCACCATCAAT                 CGGC ACC GCTG                 TTTTCCCCAGGCCCG  64 31
CWR61_RS18210 3857443 .. 3857453 +  -2.4  -3.21099   CGCTTGCCCCGGAAC                 CGCG CGT CGCC                 TTGCTCCTGCAGGCG  43 359
CWR61_RS18240 3862844 .. 3862862 +  -3.8   -3.8211   CACCCAGGCCATGAT             GCTGTC ATGGATG GGCAGC             TTGTTGTCGATGGCC  58 329
CWR61_RS18265 3869654 .. 3869667 +  -2.3  -2.71731   GGCTCATACACGGCG               TCGCC GCGC GGCCA                TAGTTCGACGATCCA  39 171
CWR61_RS18290 3874003 .. 3874026 + -13.9   -5.5112   CCGCCAGACACGAAA          GCCCCTGAC AAATCA GTCAGGGGC           TTTTTTCTTGGTCCC 100 35
CWR61_RS18295 NONE
CWR61_RS18300 NONE
CWR61_RS18305 NONE
CWR61_RS18310 NONE
CWR61_RS18315 NONE
CWR61_RS18320 3881394 .. 3881412 + -13.8  -2.61264   TCATCATGGAAGGCC             GCTGCCCG CTC CGGGCGGC             CTTGTCCATGGAGCC  70 111
CWR61_RS18325 3882649 .. 3882666 +  -5.5  -4.20084   GCCAAGGTCCAGGCA             CGCTGAG CATC TTCGGCG              TTTTCCATACGTACT  66 20
CWR61_RS18330 3885359 .. 3885382 +  -7.4  -2.84098   GCCTGTGCCGAAAAA          GGACC-ATCCG TCG CGGATTGGCCC          TCGTTCCTTGCGCAC  52 415
CWR61_RS18355 3890299 .. 3890338 +  -5.5  -3.05384   ACTGAGCGCCGCGCG  GCCCGGGCCCATGGCCGG CGACT CCACCCAC-GGCCCGCGC  TTGCATACCGGCGCA  49 36
CWR61_RS18360 3891520 .. 3891536 +  -5.8  -3.28712   GGCGGCGATCCAGCC              CGCCGT AGCGC ATGGCG              TTGTAGCGGGCCCAG  52 488
CWR61_RS18390 3898690 .. 3898715 +  -9.7  -2.50816   AGCCGCACGGCTGAC         GCGTGACGGGCC CGC GGCCGGTCA-GC         CTTCCTGGCTGACGA  55 20
CWR61_RS18400 3899719 .. 3899743 +  -4.2  -3.31322   TACCGCCGGCGGTTG         CGGATTGTCGC CATT GCG-CAGGCCG          TTCTCACAACTTCAC  49 188
CWR61_RS18405 3900176 .. 3900193 + -14.1  -5.00616   AGATCAATGAAAAAA             GCCGCCC GGAT GGGCGGC              TTTTTTGCGGCACGG 100 55
CWR61_RS18425 NONE
CWR61_RS18430 3906669 .. 3906712 +  -2.8  -2.71003   CCGCGCGCGTGCGGG CCGC-CGGCCCGCGCGGCGCG CGA CGCCCTGCCCCGCCTGAGAGG ATTCTGCTGTGTTGC  40 49
CWR61_RS18435 NONE
CWR61_RS18440 3908512 .. 3908528 +  -3.6  -2.83164   CGACGTGCTGGATCC              GCGCCT GCGCA AGGAGC              TGTAATCATGACTGA  41 4
CWR61_RS18445 NONE
CWR61_RS18450 NONE
CWR61_RS18455 NONE
CWR61_RS18460 NONE
CWR61_RS18465 3913368 .. 3913409 +  -9.4  -3.02511   TCCCCGGCCGAGGGC TG-AGGCCGGCCCG-CCGCG CGGG CGCAGACGGCCTGGCCTACA TCTTCACCACGTCCA  59 23
        trxB NONE
CWR61_RS18485 NONE
CWR61_RS18490 NONE
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 3926080 .. 3926136 +  -9.4  -2.70932   CAACCTGGCGCTGGA CCGGCTGCGC-TG-AAGCGGCGCGCGTA TAG TATGCGTGCAGCTTGCGCGCGCGACCCG TCCTTACGCGACACC  56 13
CWR61_RS18525 NONE
        kdpE 3929995 .. 3930014 +  -4.9  -3.91084   CCGGAACTGGGACGG            GCCCACT CCGACC AGCGGGC             TTTCCTTGAAAATGC  60 411
CWR61_RS18550 3934580 .. 3934616 +    -5  -3.86935   GTCGGACAGGCTGCC   GGCCAC-CGCGTCCATC GTCG GATGGCTGCGTGCGCCC    TTCTTGTACTCATTG  60 511
CWR61_RS18565 NONE
CWR61_RS18570 3937221 .. 3937270 +  -6.4  -3.16881   CGGCCTGGGTGATCG TGCCGGCATGCA-CGAACCCCAGC TTGC GGTGCAGTGCGATGC-TGCCGGCA TTGGTGGCGTCGATC  50 124
CWR61_RS18585 3941311 .. 3941329 +   -16  -4.18018   CCACGCAAAAAGAAA             CGCCGGCA TGA TGCCGGCG             TTTTACGTGCGCACG  95 163
CWR61_RS18625 NONE
        recN 3951004 .. 3951024 +  -3.3  -3.50853   TACAGCACCATGGCG            TGGCTTT CGAGCAC AAAGCCG            TTGTCCTTCGCCACC  49 148
        bamE NONE
CWR61_RS18645 3953120 .. 3953132 +  -4.7  -3.29144   CTGGTCGATCAGCCA                GCCGG CGG CCAGC                TTGTAGCGGCCATCG  49 263
CWR61_RS18655 3954254 .. 3954275 + -14.5  -5.30348   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTCTTGCGT 100 37
CWR61_RS18700 NONE
CWR61_RS18705 NONE
CWR61_RS18710 3967355 .. 3967370 +    -4  -3.90588   CGCGCAGCGATACCC              CTTC-GG ATT CCAGAAG              TTTCATTACCCCATA  58 426
CWR61_RS18725 NONE
CWR61_RS18730 3971967 .. 3971984 +  -5.5  -3.71848   GCCCGGCCGGGCATG             GGCTCCA CCTA TGGAGCA              TTCTTGATGACCACG  60 273
CWR61_RS18735 NONE
CWR61_RS18740 NONE
CWR61_RS18745 NONE
CWR61_RS18750 3975650 .. 3975707 + -14.7  -3.00946   CAGCGCCTTCCGCCT TCCCTGCCAG-CCGCAACGGCTGGGCCG CGC CGGCCCAGCCGCTGGGGACTTGCACGCC TCATTTCTCGACAAG  79 45
CWR61_RS18755 NONE
CWR61_RS18760 NONE
CWR61_RS18765 3978362 .. 3978387 +  -6.7  -2.56046   TTCATGCGCGCCTGA         CC-GGCGCGGCG GGC CGGCGCCCCCGG         TCGATTACAATTTCC  47 26
CWR61_RS18770 3979264 .. 3979278 + -12.8  -2.71712   CCACGCAGCTTCTGA               GCCGCG GCG CGCGGC               CTTTGGCGGCGGAAA  68 26
CWR61_RS18775 NONE
CWR61_RS18780 NONE
CWR61_RS18785 NONE
CWR61_RS18790 3984073 .. 3984113 +  -4.7   -3.2794   AACTAGGCTTGCGGG TGGCTACCGGG-TGCGGGCC GCAA GCCCCGCAGCCCGGC--CCA TTGGTGTCCATGGAC  49 35
        modA 3985005 .. 3985019 +  -8.5  -3.05844   GGCTACACTGTGAAC               GGCCG ATACC CGGCC               TGTTCACCTGCCGCC  57 61
CWR61_RS18800 3985761 .. 3985782 +  -2.1  -2.56596   CCTTGCTTGGCCCAA           GCAGTACCC ATGC GGGAATAGC            TCAGTTGGTAGAGCG  38 133
CWR61_RS18805 3985860 .. 3985888 +  -3.8  -5.58179   CCAAACACCAAAAAG       GGAAGC-TAGCGG TTAC CTGCCGTGCTTCC        TTTTTTCTTGTAGTC 100 38
CWR61_RS18810 3985992 .. 3986011 + -12.1  -3.94877   CTCCAAACACTTCAA            GGCCCGC CGCATC GCGGGCC             TTCTTGTTCCAGGAT  84 35
CWR61_RS18815 3986481 .. 3986498 +  -3.3  -3.14468   TGATCCGGCCGTAAC             GCGGCCCG GCG CGCGC-GC             TTGCCTATAATGGCG  43 27
CWR61_RS18820 3987590 .. 3987602 +  -4.7  -2.72739   CGCGCCGGAGGGTGC                GCCAG GTC CGGGC                ATTGTCTCGATTCCC  44 476
CWR61_RS18830 NONE
CWR61_RS18835 NONE
CWR61_RS18840 3989919 .. 3989933 +  -8.5  -3.46602   TGCCCGCGGTCGCGC               CGCCG GCCAA CGGCG               TTATGATGTAAGCCA  62 0
CWR61_RS18845 3990712 .. 3990749 +  -3.2  -3.00923   GCCGGCCTGAGCACG   CGCGGGGCGGCAAAGT CGATCT ACAATTCCGCCCCATG    TCTATCCTCTTCCAC  42 31
CWR61_RS18850 3992010 .. 3992020 +  -8.2  -3.14564   CAGCGCGGCGATTGC                 GGCC GGC GGCC                 TTGGTCGCGACCTCG  57 239
CWR61_RS18860 3993951 .. 3993980 + -22.3  -3.01791   CACCTGAACCGCCAC       GCAAAAGCGCCCC GTCC GGGGCGCTTTTGC        TATTCGCCGGCCGGT 100 45
CWR61_RS18880 3997167 .. 3997184 + -14.1  -3.18264   TGCCAGCTGGCGCTT             GGGCGCG CTGC CGCGCCC              TTCCTGCGTGGGCGC  72 81
CWR61_RS18900 NONE
CWR61_RS18905 NONE
CWR61_RS18910 4001642 .. 4001654 +  -2.6  -3.07816   CGTCTCCACTAAGGG                CGGG TGGAT CTCG                TTGGCTGCCTCCAGA  42 29
CWR61_RS18915 4003020 .. 4003046 +  -7.9  -3.90112   CGAGGTCATAGGCGA         TCTCCGCGCGG GCATG CGGCGCGCAGA         TTTCGTTCAGGCCCA  67 290
        galU NONE
CWR61_RS18955 4012000 .. 4012014 +  -5.6  -4.09685   CGGGAAAGCGGCGCG               TGCCGG ACA CGGGCA               TTTTAGGGGCTGGCG  66 521
CWR61_RS18965 NONE
        dusB NONE
CWR61_RS18975 NONE
        purH NONE
        ruvC NONE
        ruvA 4017671 .. 4017681 +  -2.4  -3.59979   CTGCATCCGCCCCAG                 CGCC ATG GGCA                 TTTCGCATACCGGCC  50 221
        ruvB 4020908 .. 4020926 + -13.1    -5.252   GCCGCGCGCGGGCGC             CCGCGCG CGAGC CGCGCGG             TTTTTTCTCGGCCTC 100 289
CWR61_RS19020 4024847 .. 4024857 +  -4.6  -3.31792   AGACCGTGTGGGGCA                 TCGG CTA CCGG                 TTCTCGCCCTGATGA  51 3
CWR61_RS19025 4026317 .. 4026350 +    -5  -3.33696   CACGGCGCCGTCAGG     CGCCCGGCGGCGGC AAGAGC GGCACCGGCCGGCG      TTCCTTGCCGAACAC  51 49
CWR61_RS19040 4030643 .. 4030681 + -18.7  -3.18274   CCCGACAATCCGCTG   TCGCCGGCCGCCCTCCC TCTCC GGGCCGGCGGCCGGCGC   TTCCATTCCAATCCA  93 85
        minC 4031635 .. 4031653 +  -2.4  -3.86346   GCCTTCATACGCTTT             TTGCTTTA CGA TAACGCGA             TTTGTACGCACATAA  55 86
        minD NONE
        minE 4033191 .. 4033206 + -11.8  -4.05446   GCGCCCATGAAAAAA              CCCGGC CGAA GCCGGG               TTTCTCGTTCAGGCG  84 460
CWR61_RS19080 NONE
        iaaH 4039190 .. 4039223 +  -7.9  -3.59979   CGATCGCGGCGCATT     GCATCGCGACGCTTG CCGG CGCGCGCCGCGGCGC      TTTAAGGTGGAACGA  63 87
CWR61_RS19090 4039825 .. 4039847 +    -9  -3.01791   CACGGCCAGCCCGTG           GCCAAGCGCC CGC GGCGCCTCGC           TCTTGCAGCGCGCAT  55 92
CWR61_RS19125 4047525 .. 4047546 + -18.7  -4.56597   CCGCGCATGAAAAAA           GCCGCCGGC AAGG GCCGGCGGC            TTTTTACCCGCAAGC 100 76
        uvrA NONE
CWR61_RS19155 NONE
CWR61_RS19160 4058169 .. 4058198 +  -4.1  -3.14132   GAAACCGGCGCGGGG       GTCGAGCAGGCTG GCCA CGGCATGGGCGAC        TTCCTCGGGACGGCC  45 278
CWR61_RS19175 4061539 .. 4061567 +  -4.3  -2.60496   CTGCTCGCCGCCGCA        CCCGCCGCCTGAC CAT GTCCGACGCCCGG        CTCTTTGCCCGCAGC  41 14
CWR61_RS19180 4062294 .. 4062327 + -28.3  -3.61715   CTCCTTCCATAAGAA     GGCGTGCCTGTCCCC GTAT GGGGACAGGCACGCC      TTCTTACCGGGAATC 100 29
CWR61_RS19190 NONE
CWR61_RS19195 4065472 .. 4065489 +  -2.6  -3.05463   CGCGCCCGCGGCGTT             GGCGGT ACACTG ACAGCC              TTCCATCCAGCCGGT  42 52
        pdxH NONE
CWR61_RS19205 NONE
CWR61_RS19210 NONE
        purU 4069219 .. 4069251 + -12.6  -3.15544   GCGCCGTAGCGCCTC      GAGCTGGTCGTGCG AATTG CGCTCGGCCAGCAC      TTGCTCCACATCGGG  68 525
CWR61_RS19225 NONE
CWR61_RS19230 NONE
CWR61_RS19235 4073759 .. 4073774 +    -6  -4.07618   GCTTCCAGCGCCGTG              CCGCGC TCGA GCTCGG               TTTCCTTGTTGCGGC  66 189
CWR61_RS19245 4076383 .. 4076398 + -11.8  -3.57144   GCGCGCAAGAAAAAA              GCGCCC CGCG GGGCGC               TTTCGGCGTGCACGG  77 46
CWR61_RS19255 4078968 .. 4078992 +   -10   -2.8294   GGTCGGGTTGACCTT          GCCGGGCA TGATGGAGC TGCCCGGC          TCGTTCTCGGGGATG  57 467
CWR61_RS19265 NONE
CWR61_RS19270 4081994 .. 4082042 + -11.6  -3.68351   GTCAAGCGTCGATGG CGTACAGC-AGGGTGCCCGTCCC GGCT GGGACAGGCACCCTTGCCGCGGG TTTCGCTCCTCCCCA  74 82
        mutL NONE
        miaA 4085899 .. 4085934 +  -6.8  -3.53811   CGGTATCGGCCACGC    TGCCC-TGCTGCTGCAG CCA CTGGAACAGCTTGGGCA    TTTCCCAGCCGTCGC  57 287
CWR61_RS19295 NONE
CWR61_RS19300 NONE
        pcnB NONE
CWR61_RS19310 4090678 .. 4090693 +    -6  -3.30441   GATCAGGTCCATGAA              GGCCGC GCCC GCGCCC               TTGTAGGGAATCGTC  52 441
CWR61_RS19330 4095989 .. 4096020 + -20.2  -3.76413   CGCAGGCCGTCCAAT      GGTGTCCGGTGCGC TTGC GCGCACCGGATGCC       TTTCCCATTTTGCAA 100 42
CWR61_RS19335 4097166 .. 4097196 +  -4.8  -3.62522   GGTCAGCGCCTCGGC      CGTCA-GGGCATT GAGCGA AATGCCCATGAAG       TTGTTGACCACCTTC  54 432
CWR61_RS19350 NONE
CWR61_RS19355 NONE
CWR61_RS19360 NONE
CWR61_RS19365 NONE
CWR61_RS19370 4102730 .. 4102766 + -13.5  -3.28712   AAGCTGGAGTAGTCC    GGCTCCGCACGGCGCCG CTC CGGCGCCGTGCTACGGC    TTCTCGGGCCAGCGC  74 29
CWR61_RS19405 NONE
CWR61_RS19410 NONE
CWR61_RS19415 NONE
CWR61_RS19420 NONE
CWR61_RS19425 NONE
        glyQ NONE
CWR61_RS19440 NONE
CWR61_RS19445 4118866 .. 4118884 +  -5.8   -2.5409   CAACTGCTGCAGGAG             GCCTGACC CAT GGCCTGGC             TGCGTTCGGCGTTGT  45 20
CWR61_RS19450 NONE
CWR61_RS19455 4120536 .. 4120546 +  -2.4  -4.11216   GATTTGCTACGATGA                 CGCC CTG GACG                 TTTTACCCATGAGGA  58 63
        gloA NONE
CWR61_RS19465 4121514 .. 4121526 +  -6.2  -2.89564   GACTGATCCATCCGC                GGCG AGATG CGCC                TGTCTCCACTGGGAC  47 35
CWR61_RS19475 4125302 .. 4125323 +  -2.1  -4.63527   CAGGATGACCCAGTC           GC-CCGCCTC GAC GCGGCCGCGC           TTTTTCAGCTCGTCG  71 110
CWR61_RS19485 4127890 .. 4127906 +    -5  -2.65993   CATGCAGCTGTGGGT              CGCGGC CGGAC GCCGCA              TGCTCTAGGTGTGAT  44 1
CWR61_RS19490 4129026 .. 4129038 +  -9.1  -2.52464   GCCGCCAGCAAGGCG                TCGGC CAG GCCGA                TGAATTGCGCCACGC  51 100
CWR61_RS19510 NONE
CWR61_RS19515 4135709 .. 4135725 +  -2.2  -3.53012   CAACGTGGCTGCAAC              GCGGTA TCCTC TACCAC              TTTGGCCCGAAGACA  47 94
CWR61_RS19520 4136843 .. 4136871 + -14.6  -3.23853   CCGCGTCCGCCAGCC       GGCATGGGCGGCG GACG CGCCGCCT-TGCC        TGTTACTTGACCGCG  77 383
CWR61_RS19535 4138500 .. 4138513 +  -4.5  -3.61398   CCCGACCGATGAAGC               CGCTGG TGC CC-GCG               TTGTTGACCAGCGCG  54 519
CWR61_RS19605 4154876 .. 4154904 +  -5.1  -3.84406   CATGCCTGCGCACAC        GCTCGCGCAGCGA CGA TTGCGGCCCGATC        TTCTTCTGGTAGGCC  60 418
        nspC 4156749 .. 4156768 +  -4.2  -3.18366   AGGATTACGTAGACA            GCCTG-TCC TGA GGAACTGGC            TCTGTTGATTGAAGC  47 15
CWR61_RS19620 4158298 .. 4158309 +  -5.8  -2.93073   GGACGCTGCGCCATA                GGGT GCAT ACCC                 TGCTTGTTCCGCCGC  47 265
CWR61_RS19645 NONE
CWR61_RS19650 NONE
CWR61_RS19655 4164813 .. 4164841 + -17.5  -4.20696   GGCTCTAAAAACCAA        GGCCTTGCAACTC GAT GCGTTGCAAGGCC        TTTTAAAGTTCGTAC 100 33
CWR61_RS19675 4166978 .. 4167034 +  -7.9  -3.63694   AGGAGTATGCCCAGG GCCACCGCGCCGGCGCCGCGCG-CG-GCC AGC GGCCCGACATGCA-CGCCGGCGTCG-GGC TTCTTGAAGCTGCCT  60 154
CWR61_RS19690 4170764 .. 4170785 +  -6.5  -3.55563   CCTCGCCCACCGACA           GCAAGTCCGG ACG CCGGACG-GC           TTTCGCGGATCGCGT  57 464
CWR61_RS19700 4171254 .. 4171274 +  -8.2  -3.35679   AGGCCGGCATCGGCG            CGCCAGCC ATCGC GGCTGCCG            TTATCCGTCCAACGC  60 50
CWR61_RS19745 4179727 .. 4179761 +  -3.4  -3.61398   AGGCCTCTTCGTAGA     GCCGCGTGGCGTCG GCCAGCG TGACATCGCGCGGA     TTGTTCGCCAGCAGG  51 103
CWR61_RS19785 4189688 .. 4189706 + -13.1  -2.93073   CCATTGCAGCACCGC             CCCGGCC GTCAA GGCCGGG             TCCTTCTTCACGACG  64 179
CWR61_RS19795 4192704 .. 4192716 +  -6.2  -2.72379   GCCCACGCCCAGGCC                GGCG CGCAC CGCC                TGCTTGACGCCTTCC  46 227
CWR61_RS19805 NONE
CWR61_RS19810 NONE
        mgtE 4196585 .. 4196598 +  -3.1  -5.15969   GCGCTATCGGTTAAG               GTGTA GGTT TGCAC                TTTTTTCCGTTAGCG  86 95
CWR61_RS19820 4197394 .. 4197410 +    -5  -4.03234   GCCTGCCCGGTATGG              CAGCGC AGCCA GCGCGG              TTTGTATGCGCCGCC  63 251
CWR61_RS19845 4201527 .. 4201548 +  -9.3   -4.1891   ATCGCTCAGACGCTT           GTCGCCGGC CACC GCCAGCGGC            TTTATCTTGCCGGCC  75 332
CWR61_RS19870 4207854 .. 4207882 +  -8.7  -3.51032   GCGGCTTGCCCAGCA        GATACAGGTCGCC GAT GGCGTCCAGGATC        TTGTGCTTCACGAAT  61 307
CWR61_RS19955 4228787 .. 4228801 + -11.4  -3.06183   GATCCAGGCGGCCGA               CCGCGT CGA ACGCGG               TTGCATAGAGCTCCA  62 260
CWR61_RS19970 4231531 .. 4231541 +  -8.2  -3.01712   TGCCGCATGCTGCTT                 GCGC CGC GCGC                 TGTTCGCACCAGACG  56 264
        hppD 4240970 .. 4241002 +   -25  -3.53343   GACCCCTGCCGCAAA      CGACGAGGCCCACC TTCAC GGTGGGCCTCGTCG      TTTGCGGCGCGCGTT 100 39
CWR61_RS20030 4244881 .. 4244893 +  -9.1  -3.27923   GAGCACGACCTCACC                CTGGC CGC GCCAG                TTGATGATCTTGCCC  59 384
CWR61_RS20055 4247245 .. 4247259 +  -4.2  -2.94411   GCATGAACTAAGGAG               ACCATG AGT CATGGA               ATTGTTTGACAACCT  44 30
CWR61_RS20060 4248798 .. 4248815 + -14.1  -6.11644   GCCGGCCGGCGCGAA             CCGGGCC CGCG GGCCCGG              TTTTTTTTTGCCTCG 100 63
CWR61_RS20065 NONE
CWR61_RS20070 4251590 .. 4251627 + -20.6  -3.48276   GCGCGACTGACGCCA   C-GGCGCCGGCCGCTCG TTGCC CAAGCGGCCGGCGCCCG   TTCTATCAGGCCGCC 100 31
CWR61_RS20080 4253764 .. 4253778 +    -7  -3.14132   CACATATGTTGGCCT               GCCCGG CGC CCGGCC               TTAATCAGGCGAACG  51 482
CWR61_RS20090 4256247 .. 4256279 +  -8.4  -2.62184   CGGCGACCTGCACCT     CGGCG-CGGTCG-GCG TAG CGCACGACCGATACCG     TGATGTGCGCCCCCG  51 338
CWR61_RS20110 4260561 .. 4260581 +  -8.1  -2.65264   GGCGGGCGCCAGCCC            GCCCCGCGG CAG CCACAGGGC            TCCTATCGATCGTGA  50 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB 4264631 .. 4264650 +  -2.8  -2.54325   CAACGTGGGGCCCTT            TTACCCGT TAAC ACGTGTGA             CTCTCTTTGCAAAGG  39 15
         pal 4265201 .. 4265230 + -21.5  -4.54727   AGCAGCCCCACCACG       CGTCGGGACGGTC ATCC GGCCGTCCCGACG        TTTTCGTTTCAGACC 100 56
        ybgF NONE
CWR61_RS20150 NONE
CWR61_RS20155 4267869 .. 4267912 +    -5  -3.17075   TATATGCTCATAGGA TGAGCACCTCGCCCGCCGCCG GCC CGGCCGCGG-CGCGCTTCCCG TTGACTTCCCCGCCC  47 111
CWR61_RS20160 NONE
CWR61_RS20165 4270792 .. 4270807 +    -6  -4.46212   GTGAGTTCCTGCAAG              GCCCGG CTGA CCTGGC               TTTTGTCGTAGCGGC  75 274
CWR61_RS20175 4272748 .. 4272768 + -13.9  -3.05343   CTTCGCAGCCCAGCC            CCGCGGCCG CCT CGGCCGAGG            TCTTGCCGGTCTGGG  69 406
CWR61_RS20185 4273826 .. 4273860 +  -4.1  -3.01712   GCCCGGCGCGGCGCC    CAGCCGCGCGGACTGC GCAC GCGATACGC-CGGCCG     TATTGGCCGAGACAA  44 45
CWR61_RS20190 NONE
CWR61_RS20195 4276731 .. 4276777 + -11.2  -3.06183   CAAGGCTTAGCGCGC CGCGCCCGCCGCCGGGCAGGCC GGC GGGCGGCTCGGCGTCAGACCCG TTCGATGGCGATCGC  66 31
CWR61_RS20215 4281746 .. 4281776 + -18.3  -3.29144   TTGCACGACGCCCCC       GGCCACGTCGGCC AGCGC GGCCGACGTGCCC       TTGTACGGCACGTGG  89 423
CWR61_RS20240 4285993 .. 4286019 +   -15  -2.66316   CGCGCTAGCCCCGCG         CCGCCGCCCCCG AGC CGCGGGCGGCGA         TGATCTGCTCGGCCA  75 33
CWR61_RS20265 NONE
CWR61_RS20270 NONE
CWR61_RS20275 4293606 .. 4293656 +  -4.2  -3.40403   CGGCCCGGCGCCTGA GCGGCTCAGGCGCCGGCCGGCTCG ATC CGGCCCCACCAGCGCGCGCGCAGC TTGTCATAGGCCAGG  49 26
CWR61_RS20290 4295721 .. 4295736 +  -2.4  -2.78384   TCGAACGGGTAGGTA              TGCAGG GCCA CCAGCG               TGTCGTCCGGGCGCA  39 352
CWR61_RS20305 4298769 .. 4298809 + -11.8  -3.72576   CAGGCCGGCCATGGA GCAGCCGGCCAGGCGC-ATG CGC CGTTGCGCCCGGCCG-CGGC TTTCGTGGGGCGCAC  80 120
        gltS 4300071 .. 4300082 +  -4.4  -3.16881   GCCGTTCGTGGGAGG                CATG TGAC CATG                 TTCATCCGCTGGCTC  45 19
CWR61_RS20315 4301772 .. 4301820 +  -4.4  -2.71712   GACGGCCATCGCCAC CCTCGGCAT-ATCGGCGCCGAGC GCCT GCGCCGCGCTGATCACGATGGGG CTTTGCACCGCCCAC  40 212
        gloB NONE
CWR61_RS20365 4312377 .. 4312402 +  -3.3  -2.71712   GCGCCTGTCCGCCAA         GCCGCTA AAATTCCTACAA TAGCGGC          CTTTCCGCAAGGCAA  40 64
        fabI 4313320 .. 4313369 + -19.3  -2.62616   CCAAATCCGACCTCC G-GTGCCTGTCCCCGCAGGGAGGG TGC CTGTCCCCGCCGGGACAGGCACAC TGCTGTACGCCATCG  89 127
CWR61_RS20380 4315059 .. 4315092 + -14.7  -3.53091   CCCCGATACGGCACA     TGCTGCAGCCAGGC GCCGCTG GCCTGGC-GCAGCA     TTTCGCCGGCCAGGT  82 460
CWR61_RS20400 4318424 .. 4318434 +  -8.2  -5.15634   GTTTTAATTATTTTC                 GCGC GCC GCGC                 TTTTTTCCTAGAGTG 100 204
CWR61_RS20405 4319844 .. 4319875 +  -3.5  -2.56596   GCACCGCAACCTCCG      AATGAGAGCCGCC CGCCGC GGCGGCCCTCGCA       TCCCTTCGTCACCCA  39 21
CWR61_RS20410 NONE
CWR61_RS20415 NONE
CWR61_RS20420 NONE
CWR61_RS20425 NONE
CWR61_RS20430 NONE
CWR61_RS20435 4326698 .. 4326712 + -11.4  -3.90112   GCTCGGTGTTGAGGT               CGCTGG TGG CCAGCG               TTTCCTTGGCCGCCA  77 393
CWR61_RS20445 NONE
CWR61_RS20450 NONE
CWR61_RS20455 4330503 .. 4330514 +  -2.2  -3.18389   CCGGGCCTGCATGAA                CGAG GTGT TTCG                 TGATTTTCATCTTCC  44 95
CWR61_RS20460 4331725 .. 4331738 +  -4.5  -3.15544   CGAAGGCTACCGGCA               CCTGG GCCT TCAGG                TTCATGACCATCGCG  47 469
CWR61_RS20470 NONE
CWR61_RS20475 NONE
CWR61_RS20480 NONE
CWR61_RS20485 4336394 .. 4336410 +  -3.5  -3.34398   TACGCCATGAGCGCT              GGCCGGC CAG GACGGCA              TCTTTCCCCACACGG  47 129
CWR61_RS20490 NONE
CWR61_RS20495 NONE
CWR61_RS20500 4339770 .. 4339782 +  -3.4  -3.29511   GCGCGCATTGCCCGG                CACA CCCAC TGTG                TTGTGACGCCATGAC  45 43
CWR61_RS20505 4340609 .. 4340619 +  -2.4  -2.70932   CACGGACGCTGAACC                 CGGG GCG CCCC                 TCATTGCAGACAGAG  38 29
CWR61_RS20510 4341851 .. 4341861 +  -2.4  -3.26545   CTGTCCCCAGGGGGA                 CGGG CAC CCCA                 TTCATCCTATATAGG  44 169
CWR61_RS20515 4343010 .. 4343026 + -10.8  -3.19602   CTGCAGGGCGATGCC              CGCCGC GTAGG GCGGCG              TCTTGGTGTAGCCCG  64 155
CWR61_RS20595 4359432 .. 4359448 +  -9.4  -5.72254   ATTACCGACAACGAA              GCCAGC CCTGT GCTGGC              TTTTTTGTTCTTTGG 100 250
CWR61_RS20605 4361302 .. 4361320 +  -4.4  -4.45664   TTCCAAGTGGGAGAG             GCCCCAGC ATA GCTGGCAC             TTTTACTTCCATTGG  69 197
CWR61_RS20635 NONE
CWR61_RS20640 NONE
CWR61_RS20645 NONE
CWR61_RS20650 4371109 .. 4371136 +  -8.2  -3.78775   ATGACCTTGTCGGCG        TCCTCGCCCGCC AGCG GGCGGCCGCGGC         TTTGCTGGTGGCGCA  67 131
CWR61_RS20675 NONE
CWR61_RS20680 4379308 .. 4379360 +  -5.5  -3.85698   GTGCGGCTGCCGTCG CGCTTGACCACCGACG-GCATGGC CAGTTC GACGCGTTCGTAGGTGGTGAAGCG TTTGTCGCAGGACAG  60 360
CWR61_RS20705 NONE
CWR61_RS20710 4386071 .. 4386085 +  -4.2  -3.14931   GTCGAGCACGGTATC               GTCGTC GTT GACCAC               TTCATCGAACGTGAA  45 267
CWR61_RS20750 NONE
CWR61_RS20755 4393775 .. 4393786 +  -5.8  -3.78022   CTTCAGTAGCGGTCC                CAGG CCTT CCTG                 TTTCATCCCTCTACC  60 183
CWR61_RS20760 NONE
CWR61_RS20765 NONE
CWR61_RS20770 NONE
CWR61_RS20775 4397224 .. 4397248 +  -9.9  -3.68351   GGAGGCGCGCCGCAC          CGCCTGAGCCG GCG CCGCTCAGCCG          TTTACCTGGTACAGC  68 19
CWR61_RS20795 4401702 .. 4401760 +    -6  -3.04144   CGGTGGCGGCCGGCA T-CGGCTAGGCCGCCGCGTCCGGCTCGCG CAGC TGC-AGCCAGACGCGCCG-CATGGTCGGA TCTTCGGGATCGGCG  48 18
CWR61_RS20805 4405918 .. 4405946 +  -4.4   -3.2614   AGGCCACCGCGGTGC       CGCG-CGCGGCCG GCAC CATCTGCGTCGCG        TTGGTCTGCAAGGTG  47 235
CWR61_RS20825 4411814 .. 4411849 +   -24  -3.73224   ATTCAGAGCGGTCAC    TTCGGCGGGCGCGCCT TGCA GGGCGCGCCCGCCGCA     TTTGGTAACAACTAA 100 47
CWR61_RS20830 NONE
CWR61_RS20835 4416359 .. 4416410 + -18.2  -2.83677   AGGCCGCCTATCGGC GCCATTTGAAATGGCTCGCGCCGAC GAG GTTG-CGGGGGCCATATCAAATGGC TGTGCTGAATTCATT  89 141
CWR61_RS20840 4417285 .. 4417307 + -20.6  -4.65895   TTAGCAGTACCTTAA           GCCGCCTGGC TTC GCCAGGCGGC           TTTTTCCATCCCGGA 100 57
CWR61_RS20845 4418232 .. 4418269 + -12.5  -2.64274   GCAGTACGGCGCAGG   CGCCGCCCGCCACGCCC GGCA GGGCGTGCAGGGCCGCA    TCGATTTCGGCCAGT  62 290
         mpl NONE
CWR61_RS20920 4431185 .. 4431200 +  -2.4  -2.64354   GGGGCGCTCCTGACG              CCGCCG CGCC CGATGG               ATTCTCAATATGTAC  38 72
CWR61_RS20925 4433128 .. 4433143 +  -3.2  -2.56432   TCGCCCTAAAATGCA              CGG-GTG CGA CGCTCCG              CTTCCTCCTCTTCGA  39 60
CWR61_RS20930 NONE
CWR61_RS20935 NONE
CWR61_RS20940 4435662 .. 4435685 +    -3  -5.17744   GTGGGCCCCGGCTGC          CCCGG-GGCTG CGC CAACCGCCGCG          TTTTTGTTAATCTGT  86 49
        lptG 4436907 .. 4436921 +  -4.2  -2.87931   CCTGGAGAAAAGTTC               CTGCAT GAA AGGCAG               TATCTGGACCATAGG  43 18
CWR61_RS20950 4438230 .. 4438242 +  -4.7  -3.01712   CCGATGATCGGCCAG                GCGCG GAT CTCGC                TCTTGGCCACGAACG  46 511
CWR61_RS20985 4442986 .. 4443021 +    -6  -2.89564   CTGCCCAACCGCGTG    GCCCGGTCATGAAGACG CTG CGCTTTCCCG-CCGGGC    TGTATGGCATCACCC  47 14
CWR61_RS20990 NONE
        hemL 4444967 .. 4445003 + -11.5  -5.67063   GCGCCACGGGCACGG    CCCGGCCCATCGGATTG TTA CGATCCGGTGGGCTTCG    TTTTTTTGTCCTGGA 100 45
CWR61_RS21000 4446905 .. 4446929 +   -10  -2.58812   GGACAGGCGCCCGAA          CCGCCGTG TCAGGGAAT CACGGCGG          TGACTTCGATTTCGA  58 119
CWR61_RS21065 NONE
CWR61_RS21070 4461137 .. 4461153 +  -9.3   -2.7185   CAGGCCGGCCACGCC              GGCGCCG GCC CGGCGCA              TAATTCGACCATGAT  56 41
CWR61_RS21075 NONE
        argJ NONE
CWR61_RS21085 NONE
CWR61_RS21090 4465454 .. 4465469 +  -2.4  -2.62184   GGCGCGCACGGCATC              GCCGGT ATCC GCGGGC               TGCTCTGACGCAAGA  38 2
CWR61_RS21130 NONE
CWR61_RS21155 NONE
        glpK 4483578 .. 4483626 +  -3.8  -3.61178   CCCGCCGCCAGCCAC GCC--G-GC-GCGCCGGCGGCGGG GCTGG CCAGCTGGCGGCGCAGCACCAGGC TTTGCGCTCCATGCA  53 125
CWR61_RS21195 NONE
CWR61_RS21200 4491226 .. 4491239 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4492401 .. 4492444 +    -8  -3.72576   GGCGCGGCGCACGTC GGCGCGCGCCATGGCCGCCTC CTT GATGTGGCCATAGC-CGCGGA TTTCCTCGGGCAGGC  64 301
        mutY 4497528 .. 4497541 +  -4.5  -3.14132   AGTCGTCGAACAGCT               CG-CGC ATG GCGGCG               TTGCTGGCCAGCACG  47 400
CWR61_RS21225 4499009 .. 4499057 +  -9.7  -3.03159   CGGCGCACGTCCTCT TCGGCG-CGGCC-GCTGCGCGCCAC GTA GTCG-GC-CAGCTGGTCGGCGCCGA TGTTGCCCACGTTGA  59 196
CWR61_RS21235 NONE
CWR61_RS21240 4505879 .. 4505903 +  -7.1  -4.05714   GCGCGGCTAACGCCC         GCGCCGCCGG CCAGCC CCGG-GGTGC          TTTATCATTGGCCCT  67 31
CWR61_RS21245 NONE
        thiD 4507665 .. 4507675 +  -3.2  -4.21462   TTGACTCCCCTCTAT                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  64 68
CWR61_RS21255 NONE
CWR61_RS21260 4510003 .. 4510014 +  -5.8  -3.01712   TGCCCAGGCGCCGCA                CGGA CTCA TCCG                 TATTGACCGCCACCA  48 340
        phoB NONE
        phoR NONE
CWR61_RS21305 NONE
CWR61_RS21310 4520193 .. 4520203 +  -6.8  -3.53012   CCCCGCCCTGCTATC                 GTCG GCC CGAC                 TTTCGCGCCCCCGCA  57 47
CWR61_RS21315 4520805 .. 4520821 +  -2.9  -2.57132   TCTGGTCCACAATGG              GGGAGTT TCC AACCCTC              GTTGTACAGGCACAC  39 91
CWR61_RS21320 4522044 .. 4522079 +   -19  -2.60079   GAAAAGCTGTAACCC    CTGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCAC     TGACTTCTCCGGTGC  89 29
CWR61_RS21330 4523673 .. 4523685 +  -3.3  -3.09492   TTTGCCAAGTAACTT                CCTTC GCA GCAGG                TATTGCCGTTGACCG  43 29
        pxpB NONE
CWR61_RS21340 NONE
        pxpA 4526328 .. 4526378 + -16.2  -3.04144   AATACATAAAGCTCG CCG-CCGGACGACG-GCCGGTACGG CACG CCG-ACCGTCGCGACGTCCGGCCGG TATTCGCCGTGCGAA  78 166
CWR61_RS21355 NONE
CWR61_RS21360 NONE
CWR61_RS21365 NONE
CWR61_RS21370 NONE
CWR61_RS21375 4532450 .. 4532489 + -12.7  -2.52516   GCCTACGCGACGCGC  AGGCGGCCGTCGCCCGGC TCATC GCCG-GCGTCGCCCGCCC  ATTGCTCGTAGGCGC  67 125
        ilvA 4539852 .. 4539907 +  -7.5   -3.0682   TGCGGGCCAGACTCC CTCGAAGTTTGCGGGTGCCTGTCCCC CCTGC GGGGACAGGCACCCGAGTA-TCAGAA TCTGTGTCTGATCCC  55 386
CWR61_RS21410 4542716 .. 4542754 + -12.4  -2.53715   GGATTTCATCCAGCC  GCGCCTGAACGCG-GCC TGAGGC GGCGCGCGCTCAGTCGC   CTTCCTGGTACTGGC  64 7
CWR61_RS21455 NONE
CWR61_RS21460 NONE
        lptC NONE
        lptA NONE
        lptB 4555477 .. 4555495 + -11.6  -2.57132   CATTTCCGCATGTAA             GCGGGGGG CTG CGCCCCGC             CTTCTCGGGGAAAGC  62 26
        raiA 4556237 .. 4556249 +  -4.7  -2.90392   CGCCCTGCCACAATC                GCCCG GTT CGGAC                TATGCTTGCGCAGTC  45 211
CWR61_RS21485 NONE
CWR61_RS21490 4557894 .. 4557904 +  -5.4  -3.02511   CACCGCGCCAGCCTG                 GTTG CCC CAAC                 TGTTGCGCACGTACG  46 192
        rapZ NONE
CWR61_RS21510 4561997 .. 4562007 +  -3.2  -2.78816   CCCGCCACCGAAACC                 CGTC AGC GATG                 TGTCATGGCCGATGA  40 151
CWR61_RS21525 NONE
CWR61_RS21530 NONE
CWR61_RS21535 NONE
CWR61_RS21540 4565817 .. 4565846 + -10.7  -3.04144   GGCGGGGCCGGGTAC       TGGTGCCTGTCCC CGCG GGGACAGATACCG        TCTTGGCCGTCAAGC  62 43
        argB NONE
CWR61_RS21555 NONE
        slmA 4569398 .. 4569414 +  -2.2  -3.15663   GCACGTCGCCACAAG              CGCAAC AAAAC GTTGCC              TTGATGCACATCAAT  42 145
CWR61_RS21565 NONE
CWR61_RS21570 NONE
        gatC NONE
        gatA NONE
        gatB 4581579 .. 4581597 + -10.2  -2.62515   AGCACCGCGGCGGGC             TCGGCGCC GGC GGCGCGGA             TGATCTCGACCGATT  55 329
         xth 4583262 .. 4583274 +  -6.3  -4.08064   GCCCGATTTCGACTT                TTCGT CTG ACGAA                TTTTGGCCCACAATT  66 328
CWR61_RS21625 4585019 .. 4585048 +   -18  -3.87149   CGCACCCGGTGATCA       TGCCGCTGACCA GCACGA TGGTCAGCGGCA        TTTCCATTTGCTGGG 100 313
CWR61_RS21635 4586472 .. 4586501 + -23.7  -2.87132   GACTGATCCGCGCAG       GGGTGCCTGTCCC CGCC GGGACAGGCACCC        TGTCTACGCCAAGAC 100 35
CWR61_RS21645 4588709 .. 4588719 +  -8.2  -3.09635   CGCGCGGCATCGACG                 GGGG CAT CCCC                 TTCCATGATGACGAT  55 90
CWR61_RS21660 NONE
CWR61_RS21665 4593193 .. 4593203 +  -2.4  -3.14132   GCCGCGGTGCATGCA                 AGGC CCG GCCA                 TTCCTGGCGGGCGCG  43 397
CWR61_RS21675 NONE
CWR61_RS21680 4595962 .. 4595978 +    -5  -2.74322   CGCCCCATGCTCCCG              GACGCG GCGAA CGCGGC              ATTTGCCGCGTTCGC  44 86
CWR61_RS21685 NONE
CWR61_RS21690 NONE
CWR61_RS21695 NONE
CWR61_RS21700 4599204 .. 4599226 +  -4.8  -3.76482   GCGCGTAGCGCTTGC           CCTTGTCG CCTTCCT CGACCAGG           TTCTTGCTGGTGTCG  58 246
CWR61_RS21725 4605030 .. 4605054 +  -4.1  -2.64616   CTGCCGGGCGTATTG          GCGCCGGGC AGCATGC GCACGGCGA          TCGTGTGCGTCACGA  40 474
CWR61_RS21735 4606291 .. 4606326 +  -6.8  -4.16842   GGCGGCCAGCAGCAG    CGC-TGCGCAGCCGG CCTGCCA CAGGATGCGCACGCG    TTTCTTGAGCATGAA  69 474
CWR61_RS21745 NONE
CWR61_RS21750 4608942 .. 4608975 + -18.1  -3.14132   ACAGGCGTATTGTTA     TG-GCTGGGCCGGCGC CGC GCGCCGGCCCGGCACC     TTCCTACCGGAGGCA  89 40
CWR61_RS21755 4609992 .. 4610025 +   -16  -3.01712   GCGTCGACCACGACA     TGGCGC-GGCGCGCC CAACT GGCGCGCCAGCGCGA     TGTTGCGCGGCAGGA  78 506
        panB 4613956 .. 4614001 +  -8.9   -2.5806   GCGCTCCTAGACTTC GCCGGGTCCACGTTCCAGCACG AAC CGTGC-GGGACGTGCGTCGGAC CTTCTGCAGAAATTT  53 467
CWR61_RS21780 4615155 .. 4615211 +    -4  -4.24606   CCGTTGCATGATGGG CTGGCCCCCGCGGGGCCGGCCCCGCG AGGCA TGCGGGTCCAGCGTCCTGGCGGATGG TTTTCCCTCTCCGTT  66 42
CWR61_RS21790 NONE
CWR61_RS21795 NONE
CWR61_RS21800 NONE
CWR61_RS21805 NONE
CWR61_RS21810 4620973 .. 4621000 +  -8.2  -3.18199   ACCGCGGCGTCCGCC        GGCCCGGCCGGC GGAC GCAGTCCGCGCC         TTGCCTTGCGCCTTA  59 41
CWR61_RS21815 4622835 .. 4622845 +  -2.4  -3.72576   GTAGTACTCGGGATG                 CGGC TGC GCCA                 TTTCATCGGGCAGCC  53 500
CWR61_RS21825 NONE
CWR61_RS21830 NONE
CWR61_RS21835 4626167 .. 4626185 +  -8.1  -3.47227   CGCGTCGGACAGGCC            GGCGC-CG ATGC CGCGCGCC             TTGTCGTCCTTGCCG  58 209
CWR61_RS21860 4630793 .. 4630817 + -21.5  -4.74103   GCCCCATGAAAAAAA          GCCCTTCGGCG TTG CGCCGAAGGGC          TTTTTCCATTCCCGG 100 50
CWR61_RS21885 NONE
CWR61_RS21890 4637812 .. 4637829 +  -6.9  -3.75378   CGCTGGCTCCAGGCC             CGGCCTC TTTC GAAGCCG              TTCTCTTATCGGAAT  62 199
CWR61_RS21895 4640695 .. 4640720 +  -2.5  -4.07568   ACGAAGCAAGCCCGC         GCGTTCATC GGAAATTG GGTGGGCGC          TTTTCGCGCAGCGAC  58 108
CWR61_RS21905 4642533 .. 4642545 +  -3.3  -3.14487   CCTGAATTTCGCTTG                CCAAG TAC CTAGG                GTTTTCCCTATAATG  43 90
CWR61_RS21910 4642955 .. 4642986 + -14.5  -4.15044   CTCGCGGCGCCGCTG      CGCTGCGTCTGGCC TGCCT GGC-AGACGCGGCG      TTTCTTCCGCCCCCC  95 149
CWR61_RS21915 4644787 .. 4644822 + -22.6  -3.53224   GGCTCGTTCCGTCCG    CGCGACAGGGGCGCCGC CAT GCGGCGCCCCTG-CGCA    TTTCAGCGGGCCGTA 100 56
CWR61_RS21920 4645847 .. 4645878 + -17.2  -3.53012   TGGCCCAACCCATCT      GACCGGCCGGGCCG GCGA CGGCCGGACCGGTC       TTTCGAAGACCACCA  93 24
CWR61_RS21925 NONE
CWR61_RS21930 NONE
CWR61_RS21935 NONE
CWR61_RS21940 NONE
CWR61_RS21945 NONE
CWR61_RS21950 4651914 .. 4651941 + -21.4  -3.29144   AGCACCAAGGACGTG        GGTGCCTGTCCC CGCG GGGACAGGCACC         TTGTGCCGGCCCTCC 100 56
CWR61_RS22030 NONE
        folB NONE
        ttcA 4673324 .. 4673365 +  -7.2  -3.02511   GGCCCTTGCGCAGGG CATCGAGCAGCGCGTCCTGG TCGA CCAGGCCG-GC-GCGCGAAG TGTTGACCAGGTAGG  52 262
CWR61_RS22075 4678628 .. 4678640 +  -4.8  -2.87132   CCGAAATCGCGCGCG                GCGA AACCA TCGC                TGTGTGAGGCCGCCA  45 6
CWR61_RS22080 4679546 .. 4679571 +  -6.7   -4.7497   GAAGTGCAGCGCCAA         GCCCGGAACCCG TCA CTGGA-CCGGGC         TTTTTGCTGCATGCC  84 212
CWR61_RS22085 NONE
CWR61_RS22090 NONE
        trpD NONE
        trpC 4683623 .. 4683649 + -17.3  -2.54574   CCGGCCTCAGCTGCC        GCGGGCCGGCGC CGGC GCGCCG-CCCGC         CTCTTCCTTGCGATG  83 51
CWR61_RS22120 4686522 .. 4686535 +  -3.7  -3.10244   CTATCCTGACACCCC               CGGCG TCCC CGCCC                TACTTTCTTCGGAGA  45 32
CWR61_RS22125 4687602 .. 4687627 +  -5.3  -3.37796   CGGCGCTTGGGCCGC         GGCGCGCCGCTG CTA CGATGGC-CGCC         TTGTCCATCGTCCGC  51 85
CWR61_RS22130 NONE
CWR61_RS22135 4690030 .. 4690042 +  -3.3  -3.53811   CTGAGCCGCACGTTG                GCGTG CGA CAGGC                TTTCGGCCAGCTGCG  51 362
CWR61_RS22185 4700232 .. 4700255 +  -3.8  -2.78384   TAGCGGAGTAATACA          ATGGACACTG TATT CACTGTCCAA           TCTGCTCGCACACCG  42 72
CWR61_RS22190 4701211 .. 4701224 +  -2.3  -2.78463   CAGCACCAGGTCGCC               CGCCT CCGA AAGCG                TCTGCTCGCGCCACT  39 241
CWR61_RS22215 4703468 .. 4703505 + -10.3  -3.06302   CGCGCCGCCTCCCGG   CCGCGGGCTGCCGGCGC TGGC GCGCCGGCGGGCACAGG    TTGCATGCGCGTGGT  63 96
CWR61_RS22220 NONE
CWR61_RS22225 4705129 .. 4705142 +  -2.3  -2.64616   GTCATCGACAGCACA               AGCAC GCTC GTGCC                TGCTCTCGATGGGAA  38 120
CWR61_RS22230 NONE
CWR61_RS22235 NONE
CWR61_RS22240 4709770 .. 4709789 +  -4.2  -3.15544   ATCCGGTCGCGCTGC            TGCTGGCGC TGG GCG-CAGCC            TTGCTGGCGGTGGCC  45 49
CWR61_RS22245 NONE
CWR61_RS22250 4711526 .. 4711551 + -11.9  -3.57792   GGCCGCCTGCTGGTG         CTGGCGCGCTGA ACC TCAG-GCGCCGG         TTTCAAGCTGGCTCA  77 14
CWR61_RS22260 NONE
        alkB 4713554 .. 4713567 +  -9.5  -2.52464   TCAACTTCACGCTGC               GGCGC GCCG GCGCC                TGAATTCGGCCGCAA  55 9
CWR61_RS22270 4714525 .. 4714582 +  -8.9  -2.91681   CCTGGCGCGCGGGGC CGTGCTGGTATCGGCGCGCCGCGCCGCC GCG GCCGGC-CGGCCCACCCATACCGACGCC TATATCGCGTTGACC  56 372
CWR61_RS22295 NONE
CWR61_RS22300 4720855 .. 4720867 +  -3.4  -3.84246   GACGCCGGCACGCTG                GGAA ACACC TTCC                TTTCGTGGTTGAGCC  58 248
CWR61_RS22315 NONE
CWR61_RS22320 NONE
CWR61_RS22325 NONE
CWR61_RS22330 NONE
CWR61_RS22335 NONE
CWR61_RS22340 NONE
CWR61_RS22345 4729643 .. 4729655 +  -3.3  -3.13899   CTTCATGCAGCGCCG                CGCCA CCC TGGCC                TATTGCTAGCCGCTT  43 4
CWR61_RS22350 4731166 .. 4731194 +  -7.9  -2.93382   CCCAGGCGCGGCCCG        CGGGGCGCGCCGG TGC CCAGCGCCTGCCG        TATGTCGGTCTCGAA  50 186
CWR61_RS22365 4735074 .. 4735092 + -10.2  -3.10612   TCGCTGAACAGGGCC             TCGGCGCG GAT CGCGCTGG             TGTGTTGCAGTTCCA  59 483
CWR61_RS22375 NONE
CWR61_RS22380 NONE
CWR61_RS22385 4738215 .. 4738253 +    -8  -3.57263   GCGGCTACTGCGCGG   TCGCGCCCGAGGCCTG CACCAGC CGGGCCTGGCGCGGGA   TTTCCGCATCCAGGT  63 49
CWR61_RS22405 4743254 .. 4743280 +  -5.7  -2.83271   CCCCCCGCGCTCCAC        GGCGGC-CGCAC GCCC GCGCGCGCCGCA         TACTTGTCCAGCTCG  47 135
CWR61_RS22415 4745115 .. 4745136 +  -7.1  -4.55798   GGCCTGACGGCTGAG           GCCGGGCCG GCCG CGCCCCCGC            TTTTCATTTCGCCTG  79 34
CWR61_RS22420 NONE
CWR61_RS22425 NONE
CWR61_RS22430 4747553 .. 4747566 +  -2.3  -3.14132   CCGGGCTGGATAGGA               AGCAG CGTC CTGCG                TTACTAGCCCGGGCG  42 5
CWR61_RS22435 4748620 .. 4748656 + -23.8  -2.64155   AACCCCACCCCCTAC    CCGGGTGCCTGTCCCC GCACG GGGGACAGGCACCCGC    TGACTTTCCGCCCGC 100 39
CWR61_RS22445 NONE
CWR61_RS22450 4752520 .. 4752543 +    -3  -3.72576   CCAGCTGGCCCGCAT          CGAGCC-GCAA TGA TCGCCGGCCCG          TTTCCTGCCCCAACC  54 13
CWR61_RS22455 4753461 .. 4753479 +    -8  -3.33696   TGCAAACGCGCCGCC             CTCGGGCG GCG CGCCGGGG             TTCATTCGACCCGCA  58 61
CWR61_RS22545 NONE
CWR61_RS22550 NONE
CWR61_RS22555 NONE
CWR61_RS22560 NONE
CWR61_RS22565 NONE
CWR61_RS22570 NONE
CWR61_RS22575 4779437 .. 4779457 +  -4.5  -3.53012   TACACCCGGGCAGGC            GCGCCTGAG GGC CGCGGGCGG            TTTCGCGCCGCCCCG  51 18
CWR61_RS22580 4780469 .. 4780479 +  -2.4  -2.65298   CGCCGGCATCACGCT                 GGAC TGA GGCC                 CTTATGCTCAATCAG  38 19
CWR61_RS22585 4781790 .. 4781813 +  -7.3  -2.57132   CAGCGCCACCCCGGC          GCCAGCGTG GACCAG CGCGCAGGC           ATTCTGCGGCGAACC  48 205
CWR61_RS22595 4783672 .. 4783700 + -12.5  -2.55712   GCCCTCAGTAGCTGC        CCGACAGTTTGTC GAT GATGGACTGTCGG        ATATTGTCGATGTGG  64 47
CWR61_RS22605 NONE
        pxpB NONE
CWR61_RS22615 NONE
        pxpA 4788294 .. 4788306 +  -3.3  -2.68823   ATAGAAATCCGCACA                GTCTG ACC CAGCC                GTTCTCTAGAAAGCC  40 20
CWR61_RS22625 4789978 .. 4790007 + -12.8   -3.3506   AGTAAGACGCATGCC       GCCGGGGCCCGCC CCGGC GGCG-GCCCCGCC       TTGTCCCGCTTTGGA  77 36
CWR61_RS22630 NONE
CWR61_RS22635 NONE
CWR61_RS22640 NONE
CWR61_RS22645 NONE
CWR61_RS22650 NONE
        hutG NONE
CWR61_RS22660 NONE
CWR61_RS22665 NONE
        accC NONE
CWR61_RS22675 NONE
CWR61_RS22680 4800534 .. 4800591 +   -14  -2.54193   GGCGCCCGACGCCTA GCCGCGCC-CGC-GG-CGGCGCCCGGCCG GGC CCGCCGCGCGGCGGCCTGCGAGGCATGGC TGGATTAGAATCCTC  70 25
        selD 4801664 .. 4801697 +  -8.9  -3.14931   CCGTCGAAGTGCTCT     GATGCGCGCGGACA CGCGCGA TTTCCGCGCGC-TC     TTCCTGGAAGATACG  57 24
        mnmH 4802898 .. 4802921 + -12.6  -3.14132   AGTTAAATTTATGAA          CATCGTTCAT TATT ATGAACGATG           TTCCTCCGCACGCAC  69 152
CWR61_RS22695 NONE
CWR61_RS22700 4804869 .. 4804886 +  -4.1  -3.23216   TGGGCCTCGAAAGCC             GCC-CTGT CCG GCAGCGGC             TTGCTGGTCATCGGC  45 246
CWR61_RS22710 4807009 .. 4807021 + -10.5  -3.30771   CAGATCCACCAGCGC                GGGCG CCT CGCCC                TTGTACGGAATGTGC  63 489
CWR61_RS22745 NONE
CWR61_RS22750 4815566 .. 4815581 +    -6  -2.89191   TGAATCCCCGCATTG              CGCCGG GAAA CCGGCA               TCTCTCCAACTCTGA  47 38
CWR61_RS22755 4816405 .. 4816417 +  -4.7  -3.30159   TCCGGCGCGCTTCCC                CGCCG ATA CGCCG                TTCTGAAACCCTTCC  51 7
CWR61_RS22760 NONE
CWR61_RS22765 NONE
CWR61_RS22770 4819026 .. 4819046 +  -3.9  -3.95986   TTCCTTGCAAACCGT            TACCGCG GCAGCCG CGCGGTC            TTTCCTTCGATTCCC  60 389
CWR61_RS22775 4821372 .. 4821387 + -11.8   -4.7497   GGCGGCAAAGGGAAA              GCCGGC TTGC GCCGGC               TTTTTCCTGCCTGCG 100 71
CWR61_RS22790 NONE
CWR61_RS22795 NONE
CWR61_RS22800 NONE
CWR61_RS22805 NONE
CWR61_RS22810 4828426 .. 4828453 +  -7.6  -2.80113   CGCCGCCATCGGCGC        GGCCCGCTAGGCG GAC CGCC-ACAGGGCC        TCTGCTAGACTCCTA  52 16
CWR61_RS22815 4829374 .. 4829398 +  -7.8  -2.78816   GACCCCCGGCGCCCG         GC-CGGGCGCC GCAT GGCGCTTGCGC          TGTGCTCAAGCATGG  52 39
CWR61_RS22820 NONE
CWR61_RS22825 4831383 .. 4831412 + -26.5  -3.53012   CGCGCCGCCGCGAAA       CGCACGGGCCGGC TTAT GCCGGCCCGTGCG        TTTCGCGGCCCAACG 100 42
CWR61_RS22875 4842926 .. 4842946 +  -6.7  -3.02511   CTATGTCCACGCAAT            CCGCCGTGC GGC GCAAGACGG            TGTTGAAACGATGGG  48 505
CWR61_RS22895 4846227 .. 4846240 +  -2.3  -3.53733   AGGCCTGAGCGCCGC               CCGGT GATC ACCCG                TGTTTATCACCTCCG  47 33
CWR61_RS22900 4848306 .. 4848325 +  -9.2  -3.72695   GGCCGACAGCATGCG            CTGGCGCG CGGC CGCGTCGG             TTTCATCGAGCGCCT  67 272
CWR61_RS22940 4856697 .. 4856755 +  -5.7  -2.78384   GGTCGGCACGGGCAA CGCCTGACGACAGCG-CGGGTCCGTCGCC CTT GGCG-CGGGCCCGCCGCAACCCTAGGCCG TATCGTCGGAGGCAG  46 19
CWR61_RS22960 4862068 .. 4862078 +  -2.4  -3.17194   GCGGGACGGCCATGC                 ACGG CGC CCGA                 TTGCGTTGCCCACCT  42 42
CWR61_RS22965 4863113 .. 4863126 +  -3.7  -2.56596   GACCATCGCCAACGT               CGCCG ACAT CAGCG                TCGATTGATCGGCAC  41 4
CWR61_RS22970 4864349 .. 4864361 +  -4.7  -4.15106   GGGACAGGGCCTCTG                ACCGG CCG CCGGC                TTTTCCCGCTTACTC  64 203
CWR61_RS22980 4866985 .. 4867004 +  -7.1  -3.17212   ATGACAGCGCGCCCA            GCAGCGGC AGCGA GCCGC-GC            TTGGTGGCGTAATCC  53 169
CWR61_RS23025 4876017 .. 4876037 +  -7.5  -3.53091   CGATGTCAGTCCTCA            TGCGGGG ACGGACA CCCCGCG            TTTACAGCAAGGCCT  60 214
CWR61_RS23055 4880313 .. 4880330 + -12.7  -3.21099   CTGCTGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCCAGGCG  74 86
CWR61_RS23085 4885648 .. 4885683 + -18.2  -2.53263   GGCACAACCTGACCC    CCGGGTGCCTGTCCCC GCAG GGGGACTGGCGCCCGC     TGACTTCCCGGTGCG  86 29
CWR61_RS23095 4889710 .. 4889729 + -13.6  -3.08679   AAGGCCCCAAAAAAA            CAGACCGC CGTG GCGGTCTG             TCTTGCATGCGCGAA  76 369
CWR61_RS23120 4894474 .. 4894502 +   -16  -4.26076   TGGGGCGTTGCGTAC        TGCCCACCCGGC CCCGT GCCGCGTGGGCA        TTTTGCTGCGCCTGC 100 55
CWR61_RS23125 NONE
CWR61_RS23130 4901078 .. 4901090 +  -3.3  -3.18264   GCCTGTCCCCGCGGG                AACGG ATA CCGTC                TTAGTACGTACGGCA  45 101
CWR61_RS23135 4901912 .. 4901926 +  -7.8  -3.31144   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTAGGCGTCCCGC  58 5
CWR61_RS23140 NONE
CWR61_RS23145 NONE
        mlaE NONE
        mlaD NONE
CWR61_RS23160 4906193 .. 4906211 +  -5.2  -4.72386   CGCCCGCCGCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  80 44
CWR61_RS23165 4906879 .. 4906908 +  -4.9  -4.13561   CATTGCCCGGCAACG       GCGAAGCCCCC TCTATAAT GGGGAATTCGC        TCTTTTTTCCGGGCA  64 74
CWR61_RS23170 NONE
CWR61_RS23175 NONE
CWR61_RS23180 NONE
        murA NONE
CWR61_RS23190 4910752 .. 4910773 + -18.7  -2.61274   CATCGCCTGAACCTC           GCCGCCCGC CCCG GCGGGCGGC            CTTCCTTGCAGTACC  86 31
        hisD NONE
CWR61_RS23200 NONE
        hisB 4913762 .. 4913776 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCC  43 3
        hisH 4914508 .. 4914520 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  58 39
        hisA NONE
        hisF NONE
        hisI NONE
CWR61_RS23230 NONE
CWR61_RS23235 4917214 .. 4917229 +  -2.4  -2.52464   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAAATTCGGAGAACC  37 7
CWR61_RS23240 4917534 .. 4917550 +  -7.9  -3.84712   TCGTTCCAGTTCCTA              CAAGCGG CAG CCGCATG              TTTGATGTCAGCTTC  67 84
        tatB NONE
        tatC 4918851 .. 4918876 +  -6.1  -2.52676   AAGTGGACGGTTTCA         CGCTTGTCGCGG CCA CC-CGGCAAGCC         TACATTGCGGGCATG  45 73
CWR61_RS23255 4919557 .. 4919584 +  -7.6  -3.10344   TCGATGCCGAACCAG        CCGCGCCGCACGG CGC CCGTGCG-CACGA        TGTCTTCCATCACCC  52 340
CWR61_RS23265 4921278 .. 4921304 +  -7.9  -3.23853   GTGACGTCCTCCGGC        GGC-GCGGCGGG CGCT TCCGGCGCGGCC         TCTTCCTTGCGGCGG  53 114
        petA NONE
CWR61_RS23280 NONE
CWR61_RS23285 4924872 .. 4924903 + -18.8  -3.94846   CCGCCTGGCAATCGG      GGCCAGCGCCTGCTA ATT TGGC-GGCGCTGGCC      TTTCGCTTTTCATAC 100 123
CWR61_RS23290 NONE
CWR61_RS23295 4926057 .. 4926071 +  -8.5  -3.07816   TGCAGTCCCTCGCAA               GCGGC CCGGC GCCGC               TTGCGTCCATGCCGG  57 78
CWR61_RS23300 4926331 .. 4926343 +  -4.7  -3.12668   CCGGCCCCTCGATGA                GGCGC ATC GCGAC                TTCCCTGTCGCGCTC  47 199
CWR61_RS23325 4930710 .. 4930744 + -13.4  -3.28712   TCGCGATGAAGACGC     CCGCGGCCGGGACGTC CCT GGCGGTCCCGTCGCGG     TTGTCGCGCAAGCGC  74 276
CWR61_RS23335 4932588 .. 4932608 +  -7.5  -3.08798   TTAGGCGCGCGGCAT            GGCAATCGC GTT GTGATCGCC            TGTTCGATCACAGAT  55 81
CWR61_RS23340 NONE
CWR61_RS23345 NONE
CWR61_RS23350 NONE
CWR61_RS23355 4937274 .. 4937303 +  -3.3  -2.91264   CGGGCGCGGCGCACC       GCGCGGCGCCGCT GGCA AGCAGCGCATCGA        TATCTCCCTGGCCGA  41 138
CWR61_RS23375 4940884 .. 4940906 + -13.4  -3.06162   CGCGCCATTGCCGCC           CGGCCGCC ATCATCC GGCGGCCG           TATTGACGTACCGTC  72 57
CWR61_RS23380 NONE
CWR61_RS23385 NONE
CWR61_RS23390 NONE
CWR61_RS23395 4943480 .. 4943490 +  -3.2  -3.63968   ATATTGCGAATGAAC                 CCTT CCG GAGG                 TTTCGACGTTTCCGC  51 28
CWR61_RS23400 4944239 .. 4944259 +  -2.6  -3.05963   CGGCAGCGTCGATAT           GCT--GAGCC GCC GGCTCGGAGC           TGTTCGCCTGCCCAT  42 21
CWR61_RS23405 NONE
CWR61_RS23410 4944932 .. 4944976 +  -4.1  -3.28712   CGTCGGCGCGTCCGC GTGCCATG-ATCCGGCGCCG CCTGAC CGGCGCGGCATACGCGGCCC TTCTGGACAAGGAGC  47 17
CWR61_RS23415 NONE
CWR61_RS23420 NONE
CWR61_RS23425 NONE
CWR61_RS23430 NONE
       virB9 NONE
CWR61_RS23440 NONE
      virB11 4952609 .. 4952619 +  -2.4  -4.29396   GAGCGGGCCATCTGC                 ACGC TTC GCGA                 TTTTCGTGCATAATT  63 39
CWR61_RS23450 4952738 .. 4952759 + -15.9  -4.72272   GCCAGATTCCAGAAG           GCCCGGTTC ACGC GAACCGGGC            TTTTTGCTGCGCGGA 100 37
CWR61_RS23460 NONE
CWR61_RS23465 NONE
CWR61_RS23470 NONE
CWR61_RS23475 4958115 .. 4958147 +  -3.2  -3.02043   ATGTGCCTGCTTGCT      TTGCGTACCAGCGC CCGTC GCGCCGCGCCGCAA      TCTTCCCGCCGCCTT  42 209
CWR61_RS23480 NONE
CWR61_RS23485 NONE
CWR61_RS23490 4961849 .. 4961869 +  -3.9  -3.63515   CCCTCAACCCCAAGC            TGCGCTGAG ACG CTCATGGCA            TTGTTGGACATCGAC  53 18
CWR61_RS23495 4964030 .. 4964066 + -11.4  -2.51413   GACGCCGGCCTGCAC   CGCGCCGGGCCAGTCGC CGGC GCG-CAGGCGCGGCACG    ATCTGTTCGTTGATG  58 470
CWR61_RS23510 NONE
CWR61_RS23515 NONE
CWR61_RS23520 NONE
CWR61_RS23525 4969935 .. 4969956 + -17.3  -4.26903   CGGCCGCAATGCAAA           GGGCGCACC ATAC GGTGCGCCC            TTTTCATGCCATGGC 100 52
CWR61_RS23540 4972962 .. 4973002 +  -8.8  -3.05715   AACTGGAGATCGCCC AGCGTAG-CCGCGCCCGCG TCCA CGCAGGCGCGGACTTGGCG  TTCGGTAACGGCATT  55 264
CWR61_RS23555 4975261 .. 4975280 + -16.4  -3.85165   CCCGGACCGGCCTGA            CGGCGCGC GCTG GCGCGCCG             TTTCCATTTGCGCTG  93 55
        leuA 4977820 .. 4977848 + -10.9   -3.1372   CCACTTTCGCGCGCG        CCTGCCCCGCCTG CGC CAGATGGGCCAGG        TATTGCTCGGCGGTC  64 481
CWR61_RS23570 NONE
CWR61_RS23575 NONE
CWR61_RS23580 NONE
CWR61_RS23585 NONE
CWR61_RS23590 NONE
CWR61_RS23595 4984638 .. 4984663 +   -14  -2.60496   TCGACGAATGAAACG         GACGCCGCCG CTGACA TGGCGGCGTC          ATGTTTGCACCGCAG  70 30
CWR61_RS23600 4985757 .. 4985771 + -12.8  -3.49475   GACAGCATTTCTTCG               CCGCCG ACG CGGCGG               TTCTGTGAACCTCCG  78 3
CWR61_RS23605 NONE
CWR61_RS23610 NONE
CWR61_RS23615 4988889 .. 4988926 + -19.1  -2.93723   AGGCTCCCCAAAGTT   TGCGGGAGCCAGTCCCC CTGC GGGGACAGGCTCCCGGG    TATGGTTAATGGCCG  93 117
CWR61_RS23630 NONE
CWR61_RS23635 NONE
CWR61_RS23640 4993070 .. 4993089 +   -15  -3.19463   CCCCGTCGCCACGAA            GCCTCCGC CCAT GCGGAGGC             TTCGTCGCTCATGGG  83 59
CWR61_RS23650 4995225 .. 4995239 +  -2.8  -3.66178   CATGGCGAAGGTCAG               CTGG TGCAGGT CCAG               TTTGCGCTTGAACAG  50 141
CWR61_RS23660 4996685 .. 4996704 +    -8  -3.38522   AAACCCGACTCAACT            TTACGTTT ACGT AAACGTAA             TATTTGCGCTGCATC  58 89
CWR61_RS23665 NONE
CWR61_RS23670 4999893 .. 4999908 +  -5.4  -2.85847   CGCCACCTCCGCGCG              TGGCCGC ATA GCG-CCA              TATCCTGTCCCGATT  45 15
CWR61_RS23675 NONE
CWR61_RS23680 NONE
CWR61_RS23685 5004934 .. 5004956 + -16.3  -3.06737   CGAAGTGAAGTGAAT           GACGCCGGG CATGA CCCGGCGTC           TGTTCAGCCTTGCTC  85 28
CWR61_RS23700 5007690 .. 5007712 +  -3.2  -2.71712   TGAAGGTCGGATCCA           CGTGCGACGG CAC CAGCCGCACC           ATTTCGCCCAACGCG  40 146
CWR61_RS23710 5009938 .. 5009957 +    -2  -2.71791   TCGCGTGTCCCCGCT            CCAATGCG CCAT CGCACTGC             CTTTCCGCCAGGGCT  38 64
CWR61_RS23715 5012081 .. 5012106 + -17.7  -3.01712   GACGCCGACGGAACA         TGCAACCCACC GCAA GGTGGGTTGCA          TGTTCCGGGCACGGC  88 61
CWR61_RS23720 5014469 .. 5014479 +  -2.4  -3.28712   ACATCAAGCTGAGCA                 TCGC CCA GCGC                 TTCTAGGGGCGCCGC  44 9
CWR61_RS23725 5015219 .. 5015275 +  -6.6  -3.53091   ACCCGCCGGCTGCAT TGA-TGCG--GCCGCGCCAGACTTGGC GCGCCG GCCCGGGCTGGCGCGCCATCGCACTCA TTTCCCAAACCGCGT  57 23
CWR61_RS23730 5016498 .. 5016510 +  -5.5  -3.14468   CGTCTGCCGGCCTGT                CGTTG CGC CAGCG                TTCGATATCCTCGCC  47 326
CWR61_RS23740 5021548 .. 5021581 + -10.2   -3.2653   CATCCTGCCCGTACC     CCCGCCGCG-CGGTC CACGC GACCGACGCGGCCAG     TTGCGTTATCGTTGC  65 86
CWR61_RS23745 5022688 .. 5022698 +  -8.2  -2.82635   GCGATTCGTGCGCAA                 GGCC CGG GGCC                 TGTGATGATCGAGCT  55 10
CWR61_RS23750 NONE
CWR61_RS23755 NONE
CWR61_RS23760 NONE
CWR61_RS23765 NONE
CWR61_RS23770 NONE
CWR61_RS23780 5030099 .. 5030115 +  -5.7  -3.28712   GATCGCGCGCCAGCG              CGGCCAG CGG CAGGTCG              TTCTCGGCCAGGCCG  52 137
CWR61_RS23790 5031588 .. 5031641 +  -7.8  -3.01791   TGGACCGGCCGCAGC AATGCGGCACAGGGCCGGCGGCGC CGCGAA GCGCCGCCCGTCCCGAGCAGTACG TCTTCAGGGCGGGGT  54 85
CWR61_RS23795 5032874 .. 5032884 +  -8.2  -3.14132   ACCTCGAACGCGGTG                 CCGG AAT CCGG                 TTCATGGCCGCGAAA  56 307
CWR61_RS23845 5041343 .. 5041355 + -10.5  -2.98493   GCCGCCTTGATCACG                CCCGC GTT GCGGG                TCATTTCCTGCTCGA  59 73
CWR61_RS23860 5044788 .. 5044808 +  -2.5  -3.55444   GTAGCGCGCCAGATC            GGCGGTG AGCACGA CATTGCC            TTTGCCACCTCCGGC  50 158
        rpmH NONE
CWR61_RS23895 5054670 .. 5054714 +  -2.8  -4.12902   AGACGCTCACTTCGA ACGGAT-AGCGCGATGATCAG GAAG CTGCTTATCGCCCCGATCCGG TTTTACCGGTACTTC  60 10
        yidD NONE
        yidC 5056716 .. 5056735 + -16.4  -5.55664   CAGGCATCCACGAAG            CGGCGCCC TGCG GGGCGCCG             TTTTTTTCGTCCTGG 100 47
CWR61_RS23910 5058778 .. 5058792 +  -2.7  -2.71924   AGTCCGTAGTTGCGT               CCGGC CATGC GCAGG               GTTTCCGACACCGTC  39 402
        mnmE 5070740 .. 5070752 +  -3.3  -3.08508   CACCCGCCGCACACC                GTCCG GAT CGAAC                TCATTTTGCGCGATC  43 201
CWR61_RS23975 5073045 .. 5073060 +  -3.2  -3.29947   AAAACCCCGTCATCG              CACGCT GAAG ACCGTG               TTGCTGTGGTGGCTG  45 47
CWR61_RS23980 5074522 .. 5074536 +  -5.7  -3.05384   TCATCCGTTGGCCTC               CGATC CGCGC GATCG               TTCCATGGCCAGCCA  49 74
CWR61_RS23985 5075602 .. 5075639 +   -20  -3.06796   ATCAAGAAGTAAACC  GATCGCGCGGCCGGCGGC AAGC GCCGCCG-CCGCGC-ATC   TTCCCTACGGTGCGC 100 29
CWR61_RS23990 NONE
CWR61_RS23995 5077681 .. 5077702 + -15.9  -5.06414   TGCCCGATTGAAAAA           TGCCGCGGT GGAT ACCGCGGCA            TTTTTCTTGGGCGCG 100 46
CWR61_RS24005 5079511 .. 5079522 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CWR61_RS24000 5077681 .. 5077702 - -15.9  -4.65895   TGCCCGATTGAAAAA           TGCCGCGGT GGAT ACCGCGGCA            TTTTTCTTGGGCGCG 100 60
CWR61_RS23970 5070096 .. 5070151 - -14.1  -3.36694   ACGCACCTGGAAAGA GATCGAGCGCGCC-GACGTCATCCTGC ACCT GCAGGACGTCACCCAGC-CGCCCGATC ACCTCGACGCGCAAA  80 383
CWR61_RS23960 NONE
CWR61_RS23955 NONE
CWR61_RS23950 NONE
CWR61_RS23945 NONE
CWR61_RS23940 5063541 .. 5063553 -  -4.7  -2.78384   GTTTCTTTTAGCACA                GCGTG CGG CGCGC                TCAGGCCTGTTGCGG  44 26
CWR61_RS23935 5062288 .. 5062312 -  -2.8  -3.53722   GCCATATGCATATAA         CCCGCCACGTC AGGC GAC-CGGCAGA          TAGGCCTGCACCAGC  49 10
CWR61_RS23930 5061251 .. 5061261 -  -8.2  -2.57211   AGGGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTTCG  53 8
CWR61_RS23925 NONE
CWR61_RS23920 NONE
CWR61_RS23915 5058424 .. 5058453 - -22.9  -3.67611   GGCACCGCAACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       TGCGGCACTCAGCGC 100 34
        dnaA NONE
CWR61_RS23880 5051062 .. 5051075 -  -2.3  -5.03145   TAACGCCTTAAAAAA               CAGCC TCAC GGCCA                CACCGCTCGCGAGCG  79 81
        gyrB 5048534 .. 5048555 - -15.9  -4.41047   ACGCCCCAAGCAAAA           GAGGCTGCC TCGC GGCAGCCTC            TTGCGGCATACGACG 100 53
CWR61_RS23870 5047109 .. 5047124 -  -7.5  -2.56095   TGGACAGTGAAGTGA              CGCGG GACAAT CCGCG               GCTCAGTTGGGCCCG  50 28
CWR61_RS23865 5044533 .. 5044554 -  -8.7  -3.14132   CTGCTGCGCGACGAA           CGG-CGCCAG CCG CTGGCGGCCA           TCAGCGTCACGGCGG  56 142
CWR61_RS23855 NONE
CWR61_RS23850 5041268 .. 5041298 -  -6.1   -4.2558   CAGTTTCGACGAAAA       GCGCTACAAGCAC TTCGC GCAGCTGTAGCGC       CGCGCCAGGGCTATT  70 36
CWR61_RS23840 NONE
CWR61_RS23835 5038683 .. 5038741 - -11.2  -2.52529   CAGAATCATGAATAG GTTCCCACAGCC-T--TCCGGGCCGGGCGC ATT GCGCCCGGCCCGGACTACGGCCATAGTAA- CCGGGTCGGCCTGCG  61 44
CWR61_RS23830 5036920 .. 5036934 -  -2.1  -3.15544   GCGTATGTTCATCAA              GCGATC CTTG GA-CGC               AGCTACACACCGGCC  42 28
CWR61_RS23825 5036463 .. 5036475 -  -4.7  -3.02511   CCCATCCGCGCAACA                GCGTG TCT CGCGC                CATCTAGCCGTCCAG  46 29
CWR61_RS23820 NONE
        panE 5034452 .. 5034464 - -10.5  -2.51312   AATCTATGCACCAAT                GGCGC GCT GCGCC                TGATACGCGTGCAGA  58 1
CWR61_RS23810 5033674 .. 5033713 - -12.7  -3.92373   CAGTTTACCGAGAAA  GGTCCAGGCCGGGCGCG GCGGGT CGCGCCCGGCCCCGATT   CTCAATAACCAACCG  86 27
CWR61_RS23805 NONE
CWR61_RS23800 5032530 .. 5032563 -  -6.6  -3.19463   CTGACCATCGACGAA    CTGGCGGCGCATCTGC AGGC GC-GCGGCGCCGCC-G     CGCAGACCGAACTGG  50 71
CWR61_RS23785 5029835 .. 5029855 - -13.3  -2.96692   TACGACTACTACATA            CGCATCGCG GTA CGCGATACG            CGCGATTACGAGCGG  68 174
        ilvB 5027532 .. 5027562 -  -7.4  -3.01791   AGCTGCCCGCCAAGA       CGGTATCTGTCCCC GTG GGGGACAGGCGCCC       CGGATCATGCCTGTG  54 30
CWR61_RS23735 5016062 .. 5016095 - -13.8  -3.03124   GCGCATGCTGCAACA     GGCCTGGGGCGC CCTGGGCTTC GCGCCCCTGGCC      GCGGCCTCTCCCGAG  69 114
CWR61_RS23705 5007239 .. 5007266 -  -8.4  -3.25823   CCTGCCGCACATCAA        GACCGGCAA-GGC CGT GCCGCTGGCGGTC        ACCACCGCCAGCCGG  59 351
CWR61_RS23695 5005191 .. 5005212 -  -4.3  -3.05596   GACGCCGGGACGGAA           GTCCTGCAT CGCC ATGCCGGCC            CCGTCCTTATTTGCG  45 32
CWR61_RS23690 5004933 .. 5004957 - -13.5  -3.20991   TCGAAGTGAAGTGAA          TGACGCCGGGC ATG ACCCGGCGTCT          GTTCAGCCTTGCTCC  74 28
CWR61_RS23655 NONE
        metC 4993070 .. 4993089 -   -15  -3.14132   CCCCGTCGCCACGAA            GCCTCCGC CCAT GCGGAGGC             TTCGTCGCTCATGGG  80 51
CWR61_RS23625 NONE
CWR61_RS23620 4988802 .. 4988842 - -25.6  -2.72991   GGATACGCTGAAGGA  GCATGGGTGCCTGTCCCC GGAAG GGGGACAGGCACCCATGA  AATCCGCGGGAGCCA 100 115
CWR61_RS23565 4977335 .. 4977376 -  -5.7   -3.1876   AACGCCACCGAGCAA GCCACCGAAGCG-CAAGCCG TCG CAGCCTGACCCCTCGGGCGC CAGTCCCGCATGGGG  51 200
        rpoN 4973134 .. 4973149 -    -4  -3.96224   GAAATCAGGGACAAA              TTAGGA AACG CCCTAA               CGACCCGCCGCATGG  60 22
CWR61_RS23545 4972706 .. 4972737 - -20.2  -3.96148   TGTGGGGACGATAAA      TTGCGCCAGGCGGC ATGA GCCGGCTGGCGCAA       GACGCCGCGTCGCTC 100 39
CWR61_RS23535 4970499 .. 4970529 -  -8.4   -3.5525   AGACAGGCGCGTAAA      GCTGGCGCGCAGTG ACGCG CA-TGCGC-CCAGC      ACATGCGCAACCCCG  62 304
         bfr 4969935 .. 4969956 - -17.3  -3.75153   CGGCCGCAATGCAAA           GGGCGCACC ATAC GGTGCGCCC            TTTTCATGCCATGGC  93 62
CWR61_RS23505 NONE
CWR61_RS23500 4963476 .. 4963487 -  -3.6  -3.55622   GCGAACTGCTGGAAA                CGGC GGCC ACCG                 AGACGCTGTTCACGC  51 130
CWR61_RS23455 4952738 .. 4952759 - -15.9  -2.60763   GCCAGATTCCAGAAG           GCCCGGTTC ACGC GAACCGGGC            TTTTTGCTGCGCGGA  77 63
CWR61_RS23370 NONE
CWR61_RS23365 NONE
CWR61_RS23360 4937198 .. 4937229 - -20.2  -4.25104   GTTCCCGCAGGAAAA      CCGGTGCCTGTCCC CGCA GGGACAGGCACCCG       GGCCGGTGACGGCCG 100 50
        trxB 4929945 .. 4929979 -    -5  -2.50816   TCTCGATCCAGGAAG    GCCTGAGCATCCACC TGCGCG AGTGGCTGCTC-GAC     GGGCGGCTCGACGCC  42 511
CWR61_RS23320 NONE
CWR61_RS23315 NONE
CWR61_RS23310 4926545 .. 4926556 -  -2.2  -3.30701   CTCTACGAAAGCGAA                GACG GCAC CATC                 ATATCGCCTTGCGCC  45 45
CWR61_RS23305 4925873 .. 4925906 - -12.3  -3.18681   GTGCAAGCCTACGAA     GCGCCCGAGCACGAGG ACG CCGCG-GCCCCGGCGC     CCGAGTCGGCCGAGG  68 325
        mscL 4920748 .. 4920760 -  -6.2  -3.63569   GCAATGGGGCAACAA                CGCC CAGCT GGCG                CGCGTGCTGGGCCTG  57 479
CWR61_RS23260 4918898 .. 4918910 -  -7.7  -3.09516   GCGGGCATGAGCCAA                GCAGA CCG TCTGC                GCGCCTCGATGCGAT  52 368
CWR61_RS23115 NONE
        fghA 4891522 .. 4891541 -  -3.4  -4.08706   CGCTCAGTATATAAA            GCAGCCCG TGCC CGGCCTGT             TACCCCAGCCGCTCG  60 25
CWR61_RS23105 4890690 .. 4890720 -  -6.2  -2.75891   ACAGGCATGGAAGGA       TGTTAGCACTCCAC GCA ATCGAGTGCTAATA       CGACTGCTGCGCCGC  46 96
        rpoH 4889710 .. 4889729 - -13.6  -5.41746   AAGGCCCCAAAAAAA            CAGACCGC CGTG GCGGTCTG             TCTTGCATGCGCGAA 100 55
CWR61_RS23090 4885526 .. 4885544 -    -3  -3.68619   GCGAAGTCATGGAAA             TCGCCACC ATC GGCATCGA             CCACGCCGTGCGGCG  53 317
        coxB 4883370 .. 4883399 -   -20  -3.08015   CCAACTACCGGAACA       GCGGCGGCGCGC GCCTCA GCGCGCCGCCAC        CACGTCCTTGGGTTG 100 11
        ctaD NONE
CWR61_RS23070 NONE
CWR61_RS23065 NONE
CWR61_RS23060 4880295 .. 4880348 - -16.8  -2.78384   GCGCCCTGCATGATA GCCCTGCTGG-CGAACGAATGCCCCC TTGC GGGGGCATTCGT-CGTCCAGGCGCGC AGCGACGGCGGGTCT  81 39
CWR61_RS23050 NONE
CWR61_RS23045 NONE
CWR61_RS23040 NONE
CWR61_RS23035 NONE
CWR61_RS23030 4875784 .. 4875819 -  -9.6  -3.06796   GCCGAGCTGAGCGAA    GCCGCCC-GCGCCGCCT ACC AGGCGTGGCTGGACAGC    CGGCAATAAGGCGCG  60 245
CWR61_RS23020 4874734 .. 4874749 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CWR61_RS23015 NONE
        glmU NONE
CWR61_RS23005 4871042 .. 4871072 - -11.8   -2.9062   GGCATTATAGAAGTA      GTGGGGCGC-CGC TCCAGC GCGGGCGCCCCCC       TGGGGCCGCCCCTAG  66 37
CWR61_RS23000 NONE
CWR61_RS22995 NONE
CWR61_RS22990 4867816 .. 4867826 -  -8.2  -4.18018   CGGGTTTAGGCAAAA                 CCCG CGA CGGG                 TTCAGCCGCGCTGGC  72 27
CWR61_RS22985 4866529 .. 4866584 -  -7.4  -4.18018   GGGTGTGATCGAAAA GCA-GGTGGCCATCGTCGCGCCGGCCA AGG TGGGCAGCACGCTGACGGCCATCGTGG AAATCACGCTGGACG  73 289
        glmS 4864299 .. 4864339 - -11.7  -2.65815   GGGACAGGCACACTA  CGCCAGCCTGCCAGGACGG TAG CCGTCCCCGCAGGGGGACA  GGGCCTCTGACCGGC  62 57
CWR61_RS22955 NONE
CWR61_RS22950 4857814 .. 4857861 - -20.7  -2.65271   GACAAGCCGACAGCA TGCCGGCG-GCGCATCGCGGCAA GACC TTGCCGCGAC-CGCGCGCCGGCG TGCTTGCCGCGTACT 100 42
CWR61_RS22945 4856709 .. 4856743 - -15.7  -2.79133   CAACGCCTGACGACA    GCG-CGGGTCCGTCGCC CTT GGCG-CGGGCCCGCCGC    AACCCTAGGCCGTAT  80 30
CWR61_RS22935 4854088 .. 4854100 -  -2.6   -3.9534   ATTCACACTCACAAA                CCGG GCTTG CCGA                AATCGGGGTACGACA  57 6
CWR61_RS22930 NONE
CWR61_RS22925 NONE
        argE 4851744 .. 4851764 -  -4.5  -4.68994   ACCACTACCGAAAAA            GCGTCATGG CAG CCTCGCCGC            TGCCGCTTACCCTGT  75 32
CWR61_RS22915 4850574 .. 4850626 -  -8.3  -3.19192   CGGCATCGAACCGAA TTGAC-GCGGGACAGCGGGCGCCCG GGCCG CGGGCGCCCGCCG-CGATCAGTCGA TCCGCTGCAAGCCGA  59 18
CWR61_RS22910 4849255 .. 4849268 -  -5.2  -3.53012   CGCCTCTCGTTCAAA               GGCC CAGGAT GGCC                TTGGAGATGATGTTC  53 7
CWR61_RS22905 4847942 .. 4847961 -  -3.4  -3.65812   CCCCGCCGAACACAA            CGTCGGGC ACCT GTACGACG             CCAAGCCTGAACTGA  51 169
CWR61_RS22890 NONE
CWR61_RS22885 NONE
CWR61_RS22880 4842367 .. 4842401 - -12.1  -3.57263   ACCGGCACGCGCAAA    GC-CACCACGTCGCGG TATT CCGCGACTGGGTGCGC     AGGCAGTTCCGGGAG  74 108
CWR61_RS22870 NONE
CWR61_RS22865 NONE
CWR61_RS22860 NONE
CWR61_RS22855 NONE
CWR61_RS22850 NONE
CWR61_RS22845 NONE
CWR61_RS22840 NONE
CWR61_RS22835 NONE
CWR61_RS22830 4831383 .. 4831412 - -26.5  -3.53012   CGCGCCGCCGCGAAA       CGCACGGGCCGGC TTAT GCCGGCCCGTGCG        TTTCGCGGCCCAACG 100 46
CWR61_RS22785 NONE
CWR61_RS22780 4821372 .. 4821387 - -11.8  -3.84451   GGCGGCAAAGGGAAA              GCCGGC TTGC GCCGGC               TTTTTCCTGCCTGCG  81 51
CWR61_RS22740 4811451 .. 4811461 -  -2.4  -3.50869   TACTATTCTATATAA                 CGGC GCC GGCG                 CACACAACGGATTTC  47 120
CWR61_RS22735 NONE
CWR61_RS22730 NONE
CWR61_RS22725 NONE
CWR61_RS22720 NONE
CWR61_RS22715 4806548 .. 4806582 -   -30  -3.53012   CCTGTCGGCCTGAAA     CGGCGCGGGCCGCGCC CGT GGCGCGGCCCGCGGCG     AAGGGCACCGGCGGC 100 47
CWR61_RS22705 NONE
CWR61_RS22600 4783520 .. 4783549 - -12.1  -3.90112   CCCTGCGCAAGGAAA       CGCTGC-GCCGGCG CGG CGCCATCCGCAGCG       CCTATGTGCGCCAGC  81 137
CWR61_RS22590 4781492 .. 4781521 -  -4.1  -2.78463   ACCTGGGCTATGACA       TGCCGCTGCCGGCG GTG CGCATGCC-CGGCA       TGACCGCCGGCCAGG  40 111
CWR61_RS22540 NONE
CWR61_RS22535 NONE
CWR61_RS22530 4769764 .. 4769781 -  -3.5  -3.68962   TCTTAAGACAGAGAA             TTTCTCT CGCT AGAAAAA              ATGAAAGTGTGGCAC  54 69
CWR61_RS22525 4768921 .. 4768936 - -11.8  -5.75945   AGGCTTCAAAAAAAA              CCGCGC AACC GCGCGG               CAGGAGGAAAGCGAA 100 52
CWR61_RS22520 NONE
CWR61_RS22515 NONE
CWR61_RS22510 NONE
CWR61_RS22505 NONE
CWR61_RS22500 NONE
CWR61_RS22495 NONE
CWR61_RS22490 4760314 .. 4760324 -  -5.4  -3.14344   GATTTCCTGTACCAA                 GACA TAG TGTC                 TCCTCCTAGAAAGTT  47 94
CWR61_RS22485 NONE
CWR61_RS22480 NONE
CWR61_RS22475 NONE
CWR61_RS22470 NONE
        lpdA NONE
CWR61_RS22460 4753452 .. 4753473 - -18.7  -3.64703   GCCCTTCCATGCAAA           CGCGCCGCC CTCG GGCGGCGCG            CCGGGGTTCATTCGA  93 33
CWR61_RS22440 4748439 .. 4748458 -  -3.5   -2.8547   ATCGTCGACAGCATA            TCGGCGA GGCTCG TCGCGGA             AGTGGCCAAGCCCGC  42 371
CWR61_RS22410 4743166 .. 4743197 -   -10  -2.62184   GCCTGTCCCACATGA      GGACTGGCACCTGC CCGT GCGTGTGCCTGTCC       CCGCAGGGACAGGCA  58 63
CWR61_RS22400 NONE
CWR61_RS22395 NONE
CWR61_RS22390 4737746 .. 4737761 -  -6.8    -3.767   CATCGATGGACGAAA              GCGCCGC CCT GCG-CGC              CTTCCAGGACGCATT  61 468
CWR61_RS22370 4734362 .. 4734375 -  -9.5  -3.34895   CCCACGCTGAAGGAA               GCCGG CGGA CCGGC                CATGGATGCGTCGAT  63 282
        ctaD NONE
CWR61_RS22355 4731091 .. 4731115 - -14.2  -2.71712   CCCCTTGCCGCAAAC          GCCGGCCCCG CGCAT CGGGGCGGGC          CGCCTTGCGCTCACT  71 36
CWR61_RS22310 NONE
CWR61_RS22305 4720634 .. 4720654 - -13.9  -3.05384   CCCGGCTGGATTGAA            CCGGCGCGC CTG GCGCGCGGG            CCGGCGTCATCACGT  76 60
CWR61_RS22290 4717665 .. 4717702 -  -4.8  -3.36492   CGCGCAATTTGAGAA  GCGGCGCGTGGC-GCTCA GGCG TAGGCCGCCACCCG-CGC   AATGCAGCGATGCAA  51 2
CWR61_RS22285 NONE
CWR61_RS22280 4714918 .. 4714947 -  -9.1  -2.83271   CGAGCGCGACAACGA       CCGGCTGGCGCGC TGCG ACGCGCTGACCGG        GCTGCTCAATCGCTT  58 506
CWR61_RS22255 4711363 .. 4711378 -  -5.4  -3.29471   CGTGCACGACATCAA              CCAGGCG GCG CGC-TGG              TGCGACACGCTGGCG  49 188
CWR61_RS22210 NONE
CWR61_RS22205 NONE
CWR61_RS22200 NONE
CWR61_RS22195 4700980 .. 4701010 - -10.4  -2.95751   GCAGCAACAGAACCA      GCCCTCGG-CGGC CTGAGC GCCGTCCTAGGGC       GCCGGCCAGCCTCGC  62 19
CWR61_RS22180 4697656 .. 4697681 - -11.9  -4.96388   AAGCACTAAATAAAA         GCCCGGGAA AACCCGCA TTCCCGGGC          CCGCCGCCGCTTCAG 100 37
CWR61_RS22175 NONE
CWR61_RS22170 NONE
CWR61_RS22165 NONE
CWR61_RS22160 4693704 .. 4693731 - -21.4  -2.52464   CCCCGCGGGAATCCA        GGTGCCTGTCCC CGCT GGGACAGGCACC         CCGGGCACCCCGGAC 100 96
CWR61_RS22155 4692568 .. 4692588 -  -8.1  -4.11216   GCGGCATGCCGAAAA            GCGCGCCGC CAC GGGCCGCGC            CGGCAAACCCCGCCG  71 103
CWR61_RS22150 NONE
CWR61_RS22145 NONE
CWR61_RS22140 4689633 .. 4689644 -  -3.6  -4.37711   CCAGGAAATGGAAAA                GCGC CACC ACGC                 CATCAAGAAGCAGGC  67 71
CWR61_RS22115 NONE
CWR61_RS22110 NONE
CWR61_RS22105 4683674 .. 4683700 - -12.2  -3.65902   GCGATGCCAGTGAAA         CGCGACGCGC CGGATGC GCGCGGCGCG         GAACTGCACTTGCGA  77 88
        apaG 4677406 .. 4677436 - -10.3  -4.13945   ATGCGGATCGGAAAA       TCACCGTGCCGGG AGGAG CCCGGCTCAGTGC       AGTGTACGCGGCATG  79 19
CWR61_RS22065 NONE
CWR61_RS22060 4674922 .. 4674949 -  -5.5  -3.04398   CCTGCTCCTGAAAAC       GGCGGCC-CGCTC AATT GCGCGAGGCC-CC        TTCGATGAGTTGCCG  49 8
CWR61_RS22055 NONE
CWR61_RS22050 4672726 .. 4672738 -  -5.5  -3.53811   CCTACGTGCCCGAAA                GCGAC CTG ATCGC                CTATGCGCAATTCAA  54 387
CWR61_RS22035 4670451 .. 4670465 -  -7.8  -3.57144   GTGCGCACGCGCAAA               CAGGGC GAA ACCCTG               GCGCTGGCCACCGTG  60 267
CWR61_RS22025 4668047 .. 4668066 - -16.4  -3.75153   GCGCGCCAATGGAAA            CGCCGCGC AGGC GCGCGGCG             TCGGCAATCGGGCGG  91 81
CWR61_RS22020 4666255 .. 4666287 - -16.9  -4.54727   GTCGCCAAATGAAAA      CGGCCCCCGCCGCCA AGT CGGAAACGGGGGCCG      ATCGGCGCCGCGGCG 100 55
CWR61_RS22015 NONE
CWR61_RS22010 4664736 .. 4664756 - -14.7  -2.52676   GATCTTGCTAACGGA            CGCCCGCCA CCA TGGCGGACG            CCGAAAATTTGGGAT  73 40
CWR61_RS22005 NONE
CWR61_RS22000 NONE
CWR61_RS21995 NONE
CWR61_RS21990 4661596 .. 4661634 - -12.2  -3.53012   GCTTTCCTGTTGAAA   CGGCTTGGCGGGTTCAGC CGG GCTGCCCCCGCCCTACCG   TAGGATGGGCGGCAC  75 67
CWR61_RS21985 NONE
        atpD NONE
CWR61_RS21975 4658736 .. 4658765 - -12.9  -3.86897   GGGACGCGTCAGAAA       CGACAAAGGCGAC CGAA GTCGCCTCTGTCT        GCCTGGTGCGGCGGG  86 57
CWR61_RS21970 4657658 .. 4657687 -  -2.2  -3.09581   CAAAGGGGCAACAGA       CACGACTATCC TTGGTGATC GGA-AGCCGTG       ATTTTACTGCCCTGG  42 74
CWR61_RS21965 4656374 .. 4656385 -  -5.8  -5.00884   ACTTTGGGGAAAAAA                CGCT AACA AGCG                 TGCGAGCTTTCACGA  87 224
CWR61_RS21960 NONE
CWR61_RS21955 4651907 .. 4651947 - -10.4  -3.21099   CTGTCCCAGCACCAA GGACGTGGGTGCCTGTCCC CGCG GGGACAGGCA-CCTTGTGC  CGGCCCTCCGCAACG  65 144
CWR61_RS21900 4640444 .. 4640484 - -18.3  -3.14344   CACGGTGCGCACCAA CGGCATCGCGCACCGCAC CGAGCT GCGCGGCGCGCG-CGCCG  AACTGGGCCTGGGCG  86 240
CWR61_RS21880 4635115 .. 4635129 -  -2.7  -4.13246   GAGGGTATATATAAA               GTGGG ATGGG CCCGC               GCGGCGTCAGGTGCG  58 32
CWR61_RS21875 4633846 .. 4633876 -  -2.5  -3.88703   CGGTAGAAAGAAAGA      GCCAGGGG-AAGCA GGCA TATTAGCCCCTGGC       GCCAGGCGGCAAGTT  55 90
CWR61_RS21870 4632542 .. 4632592 - -13.1  -2.70932   TGCCTCGTTCAAGTA TGGTGGACGCCGCGC-CCGCCACG CGCG CGCGGCGGCGGGCGGCGCCCAAGG TATCGGTCAGCCCTG  68 32
CWR61_RS21865 4630793 .. 4630817 - -21.5  -5.52384   GCCCCATGAAAAAAA          GCCCTTCGGCG TTG CGCCGAAGGGC          TTTTTCCATTCCCGG 100 210
CWR61_RS21855 4629586 .. 4629601 -  -4.6  -3.53224   TAGGGCCTGGGGAAA              CTGGCG CGCC CGACAG               GAATCGAACCTGTAT  53 11
CWR61_RS21850 NONE
CWR61_RS21845 NONE
CWR61_RS21840 4625762 .. 4625798 - -10.9  -3.15544   TTCGACGCCGACGAA   GCGCGGCGCA-TCG-GC TTCGT GCGCGACTGCGCCGCCC   AGGCGCAGTGGCCCG  64 217
CWR61_RS21820 4622351 .. 4622406 - -20.5  -3.02144   CCAGGCGCTCGAAGA CGCCGCCTGAGGCGCGGCGGCATGC-CG GCC CGCGC-CGCCGCC-CGGCTCAGCCGGCG TCGGGCGCGGCCCAA 100 16
CWR61_RS21785 4614851 .. 4614878 -  -4.1  -3.59979   GCCGGCTACGGCAAA        CTGCCGTCGCTG GCCTA CAAGGACGGC-G        CCAAGGTCGACTCCC  51 419
CWR61_RS21770 NONE
CWR61_RS21765 NONE
CWR61_RS21760 4609443 .. 4609462 - -11.4  -2.58544   GCCGACCTGCAGAAT            GCCCTGGC GGTA GCCAAGGC             GCAGGGCTACGCGCT  59 71
CWR61_RS21740 4605511 .. 4605525 -  -8.5  -3.43676   TTCAGGAATGGATAA               GCGGC CTGAT GCCGC               CACGAATCGAGACTT  62 314
CWR61_RS21730 4604118 .. 4604145 - -12.6  -3.05384   CGCCGGCCGAGGCAA        CGCGCGGCCAGC TGAT GATCGCCGCGCG         CGACGGCGAGCCCAT  66 465
CWR61_RS21720 NONE
        metW 4601532 .. 4601542 -  -2.4  -3.24925   AGCGGATAGTAGCAA                 TCCG CGC CGGC                 ATCCGGATGTCAGGA  44 35
CWR61_RS21710 4600154 .. 4600169 -  -7.5  -3.14527   GAATTGTTATCAATA              CCGCC ACTGCG GGCGG               CTTGCGCGGGTAGCG  55 72
CWR61_RS21705 4598782 .. 4598795 -  -8.1  -3.50853   CCTGGTCAAGCAGAA               CCTGC TGCC GCAGG                CACTACCGCCGGCGC  58 270
CWR61_RS21670 4592338 .. 4592354 - -13.7  -2.70932   GTCGCGCGCCAACCA              CGACGGC GCG GCCGTCG              AGTACGCCTGGCTGG  67 457
CWR61_RS21655 4590099 .. 4590126 -  -2.7  -3.75629   TATGCGGAATGGAAA       GCCC--CGGGG ATGCAGGA CCCCGACGGGC        TGGGAGGCCTATTTG  53 34
CWR61_RS21650 4588498 .. 4588518 - -10.4  -3.05596   GACTTCCTGACCGAA           GGCGCCGGC GCCG GCCG-CGCC            GCCCACGATGCCATC  59 179
CWR61_RS21640 4586195 .. 4586234 - -13.7  -3.30124   GCGCAGTTTCTACAA CGACGCCGCCCAG-AAGGC GCGC GCCTTCCTGGACGGCA-CG  CCGGAGCTGGCCGGA  74 335
CWR61_RS21630 4584620 .. 4584649 -  -6.3  -4.29738   CGACATCCACGAAAA       CTGCGTGCGCCAT GGCC ACGGCGCGGGCAA        CTACGTCAACTATGT  72 144
CWR61_RS21615 4581001 .. 4581049 -  -3.2  -3.39784   CGATTTCCAACAAGA TCGCCCGCGACGTATTCGC-CGCC ATGTG GGCGGGCGAGAACG--GCGG-CGA CGCGGACGCCATCAT  49 335
CWR61_RS21595 4576613 .. 4576639 - -12.3  -2.61264   CGTTGCATGGATAAT        CAGCC-CGGGCC TGCC GGCCCGCAGCTG         CTTCGCGGGCCGGGC  64 80
        mreC NONE
        mreD 4575157 .. 4575182 -  -3.9  -3.09492   TCTTGAATTCGAACA         TGCGCCCGCCCG GAT CAGACGG-CGGA         AGATTCGACGTCGTC  45 14
        mrdA NONE
        rodA 4572032 .. 4572079 -  -9.6  -2.52464   CCTGGGCGTAACCGA CGCCCTG-CCGGGCGCCTGAGGC CGC GCCCCGGCCGCCGGTTCAGGCCG GCGCGGGGCGGCGGC  55 18
CWR61_RS21545 4565429 .. 4565467 - -11.9  -4.42788   TCGAAGGCCAGAAAA  TCACCATGCAGGACC-TGC GCG GCAAGGTCGTGC-TGGTGA  AGTTCTGGGCCACCA  88 514
        rsmI NONE
CWR61_RS21515 4561478 .. 4561512 -    -5  -3.14344   GATCCTCGCCATGAA   TGGCGGCACGCCGGCGC CGCG GC-CCGG-GT-CCGCCC    CGGCAAGCGGGGCGC  47 381
CWR61_RS21500 NONE
CWR61_RS21495 4557733 .. 4557765 - -20.6  -2.81413   CAGCAAGTAACACCA      CGGTGCCAGTCCCC GCAAG GGGGACAGGCACCG      CAAATCTCCATGTGC 100 91
CWR61_RS21450 4550445 .. 4550462 - -14.1  -4.54727   TCGCGCAAATGAAAA             CGCCGCC TGAC GGCGGCG              TTTGCCTGCGCAGGC 100 46
CWR61_RS21445 NONE
CWR61_RS21440 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC 4543336 .. 4543373 -  -2.7  -2.71041   AAGGCGAACTATAAC   CGC-GCGCCGATGC TTAGGCCAGTC ACATGGGCGCGGCG   CGCCGCAGCCGGCCC  38 10
CWR61_RS21415 4542585 .. 4542615 -    -9  -2.84812   AGCGACAGCATGACA      CGCGCCATCAGGC AGGCAG GCCTGGTG-CGCG       TGCTGCCCGACTGGG  53 157
CWR61_RS21405 4541035 .. 4541076 -  -7.4  -4.18488   ACGGATGGCAAGAAA GACATGCGCTTC--GCGCAGC CGT GCTGCGCACGAAGCAC-CGCC AACAGTGTCCGGCCT  71 166
CWR61_RS21400 4539467 .. 4539497 -  -7.5  -3.49878   GAACGAAACGGACAA       CCCGGCATACAAG CTGTT CCTGTAGGCCTGG       GGAAGAGGTGCCTGT  60 430
CWR61_RS21390 4537323 .. 4537342 -  -3.4  -4.07885   CATCTGCGCGCAAAA            CCGCGCCA GATA TGGGTCGG             AAGGCAGACGGAGCA  60 44
CWR61_RS21385 4533217 .. 4533230 -  -5.2  -3.77188   ATTGAAACATAAATA               GCGC AATGCG GCGC                CCTGGATCCGTCCCG  58 70
CWR61_RS21380 4532435 .. 4532453 - -12.4  -3.74077   CCTGAGAGAGGGAAA             GCCTACGC GAC GCGCAGGC             GGCCGTCGCCCGGCT  80 9
CWR61_RS21350 4525681 .. 4525714 -  -7.4   -3.1505   ATCACGCCGCAGGAA     GC-CTACGACCTGGT GGTGT ACCAGGTCGGCGCGC     TGGCCGGCGTGGCCG  53 524
CWR61_RS21325 4522034 .. 4522089 - -10.2  -4.09685   CGTGAGGTGCGAAAA GCTGTAACCCCTGGGTGCCTGTCCCC GAAG GGGGACTGGCACCCACTGACTTCTCC GGTGCCTGTCCCCGC  79 197
        ubiE 4514973 .. 4514988 - -11.8  -3.53811   GGGAGCGGCTGGAAA              GGCCCC GGTT GGGGCC               AGCGCGGCAAACCTT  75 121
CWR61_RS21285 4513804 .. 4513831 - -19.2  -3.30007   AAGACCGGTCCATAA        GCGAACCGGCCC TGGT GGGCCGGTTCAC         GGTGCGGCCCGGCCG 100 102
CWR61_RS21280 NONE
        ubiB 4511372 .. 4511394 -  -5.5  -3.06991   TAGGATGGTGAAAAT          CGGTTCG-GG TCGG CCACGGACCG           GGCGAGTTCTAGTAG  49 117
CWR61_RS21270 4510204 .. 4510256 -   -12  -3.72788   GGGCAGAAGACATAA GCCGATTTTACGGGAGCCTGTCCCC GGAT GGGGACTGGCTCGCGCAAACTCC-C ACGGGAGCCTGCCCC  80 211
       rfaE2 4509367 .. 4509387 -    -6  -3.31792   CCACGACTTCGAGAA            CGCGCGGC GCCAG GCCGTGCA            ATCGGCGCGCCTGTA  52 351
CWR61_RS21230 4498644 .. 4498659 -    -6  -3.05816   GGACTGGTCACGCAA              GGCGTG ACCG CGCGCC               GGCTGCCGCTGGAAT  48 335
CWR61_RS21220 4496780 .. 4496811 -    -5  -2.52464   CCCTCCCCGAACGCA      GCAC-GGCCATGCTG GTG CTGCACGGCCCGGAC      GGCATCCTGCTGCGC  42 380
CWR61_RS21210 4492028 .. 4492047 -  -6.3  -3.57144   CCGTCCAGGCCGAAA            CCCGCGC CGCCCC GCGCGTG             GAGCGCTTTACACGT  57 301
CWR61_RS21190 4488208 .. 4488251 -  -7.8  -2.92656   AAATCGATCTACAGA GTCGGACGTTCGGCCGGCGC GGAC GCGCCGGCCTGCCTTGCGCC CGCTCGCATGGACCG  54 85
CWR61_RS21185 NONE
CWR61_RS21180 NONE
CWR61_RS21175 4485063 .. 4485077 -    -7  -3.53811   GCGATCCGGCGGAAA               GCCCGG CGC CCGCGC               CGTTTTCCGCCGCTT  57 53
CWR61_RS21170 4483552 .. 4483602 - -23.3  -3.38812   CGCTGGCGAAGAACA CCA-CCGCGCCGCCCGC-CGCCAGC CAC GCCGGCGCGCCGGCGGCGGGGCTGG CCAGCTGGCGGCGCA 100 385
CWR61_RS21150 4480178 .. 4480205 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  44 42
CWR61_RS21145 NONE
CWR61_RS21140 4478337 .. 4478348 -  -2.2  -3.53224   GACCTCCTTTGCAAA                CTAC GATT GCAG                 TGCAGTCTGCCATAC  47 94
CWR61_RS21135 4477475 .. 4477498 -  -5.8   -3.5764   AACCGCAGCCCGAAA          CGGCCAGCCC CAGC GCGCAGGCCA           TCATCCCGCAGGCGC  57 496
CWR61_RS21125 NONE
CWR61_RS21120 NONE
        zapD 4474450 .. 4474462 -  -6.2  -3.03243   AGGTATCCGGCAAGA                CGGC AAGGA GCCG                CTATTTTCCACCAGA  48 177
        mdtA 4473169 .. 4473198 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  54 10
        mdtB 4470072 .. 4470094 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  43 16
CWR61_RS21100 NONE
CWR61_RS21095 4465195 .. 4465205 -  -8.2  -2.71364   GCAGGCGTTCAAGCA                 GCGC CCG GCGC                 TGCCCGAAGGCGCGC  52 308
CWR61_RS21060 4458245 .. 4458273 -  -4.4  -3.46936   AAACGTCATGAAACA        CCACCCCCGCGT CGCTC ACGCCCGGACGG        GCCGCCCGCGAGCCT  51 87
CWR61_RS21055 NONE
CWR61_RS21050 NONE
CWR61_RS21045 NONE
CWR61_RS21040 4454806 .. 4454828 - -16.3  -3.08032   CCGTCCCCAAAAGCA           CTGCGCCGG GCAGG CCGGCGCAG           GAAGGAAAACAGTCG  85 57
CWR61_RS21035 NONE
CWR61_RS21030 NONE
CWR61_RS21025 NONE
CWR61_RS21020 NONE
CWR61_RS21015 NONE
CWR61_RS21010 4447335 .. 4447347 -  -4.8  -3.53444   GGATCCTCGTGTAAA                GACG TTATG CGTC                CCGCGCCCGCGGCGA  53 17
CWR61_RS21005 4446849 .. 4446878 - -20.1  -3.01712   GTCCCCGCCGGAAGA       CGGAGCCTGTCCC GGTG GGGACAGGCTCCA        GGCTCCCACGGGGAC 100 60
CWR61_RS20980 NONE
CWR61_RS20975 NONE
        ruvX NONE
CWR61_RS20965 NONE
CWR61_RS20960 4438526 .. 4438536 -  -2.4  -2.72661   CAGCAGTTTCAAGCA                 GGGG TCT CCCA                 GACCGTGCGCCCCGC  38 8
CWR61_RS20955 4437746 .. 4437786 - -12.3  -3.06831   CCAACGGCGACTGAA  CGCCGCCGCCGCGGGCGGG CGC CCCGCCCGGTCCGGCTACA  GCTCGCCGGCGATCG  69 21
CWR61_RS20910 4428483 .. 4428494 -  -3.6  -2.73875   CTGTTGGCAATACGA                GCGA TAAA CCGC                 CTTTTTAACGCCAAA  40 64
        aroQ NONE
CWR61_RS20900 NONE
        accC NONE
CWR61_RS20890 NONE
CWR61_RS20885 NONE
CWR61_RS20880 4423026 .. 4423038 -  -3.3  -2.53519   GTTACAAATAGACAT                GTCCG CAA CGCAC                TGGTTGGATCGCCCG  39 67
CWR61_RS20875 4422364 .. 4422382 - -13.1  -5.78622   CCACCGCAAAAAAAA             CGCCCGC ATGCA GCGGGCG             TTTTGCCGGAGCCGG 100 47
CWR61_RS20870 4421802 .. 4421839 -  -4.8  -2.78384   CGGCGCCCCAGTACA  GGCC-CAGCGAC-AGCGC GACG GCGCTTGCCATCGCGGCC   AGGTGGGACAGCAGG  44 44
CWR61_RS20865 NONE
CWR61_RS20860 NONE
CWR61_RS20855 4419455 .. 4419465 -  -2.4  -2.94099   CCCGGCGATCAGATA                 GGAC TGC GGCC                 GCTGAACACGTACAG  41 8
CWR61_RS20850 4417548 .. 4417584 -  -2.2  -2.50113   TACCAGGGGACCAAC   TGGCTGGT-GC-TGCCGC TGC GCCGCGTGATACCAGCCA   CCGGCTCGATAGACT  37 416
CWR61_RS20820 4407601 .. 4407624 -  -7.4  -3.91897   GCGGCGACGGACAAA          GCA-ATGGCGC GCG GCGCCTTGTGC          AATTGCGCAACAGTT  67 106
CWR61_RS20815 4406917 .. 4406974 -  -5.6  -2.78596   GACTTTCGGACGACA GCGACATGGCGGGTAGCGGCGGCG-ACGT GGG AAGTTCGCCACCT-TACCCGA-ATGACGC GCCGCTGGCGACAGC  46 43
CWR61_RS20810 4405432 .. 4405454 - -11.2  -3.01712   GTTCTGCGGCGAATA           CCAGCCCGCC CCC GCCGAGCTGG           CTGCCCAGCACCTGA  62 283
CWR61_RS20800 4401670 .. 4401700 - -11.9  -3.04144   GTGGTATTTCGAACA      GCCGGCCG--ACCGC AAG ACGGTGGCGGCCGGC      ATCGGCTAGGCCGCC  68 31
CWR61_RS20790 4399118 .. 4399128 -  -2.4  -3.78934   TGTTGGTCACAATAA                 GGCG GAT CGCA                 GGGGATCGCGAAAGA  53 139
        dbpA 4397730 .. 4397744 -  -4.2  -3.28712   GCGTCGTGCTCAGAA               CTCTTC CAG GAAGCG               CATGCGGAACCGCCG  47 5
CWR61_RS20780 4396717 .. 4396746 -   -12  -3.16564   CGTGCAGCCCATCAA       CCGGCTGTGCGC CGCGGT GCGCGCCGCCGG        CGGCGCCGTGGTCTG  68 521
        pmbA 4390905 .. 4390930 - -19.1  -3.06815   ACGCCTGCCAAGACA         GTGCCTGTCCC CACG GGGACAGGCAC          CCTGCCGGCGCCACT  93 50
CWR61_RS20740 4389468 .. 4389497 - -20.7  -2.87132   CGTTGCGCCCAGACA       GCAGGGGCCGCCC CGAA GGGCGGCCCCTGG        CCAGGCAGGAAGGCT 100 47
CWR61_RS20735 NONE
CWR61_RS20730 4388366 .. 4388381 - -11.8  -4.70659   CGCCATATGCAAAAA              GGCCGC TTTC GCGGCC               TTTTTGCTGGACATT 100 39
CWR61_RS20725 NONE
CWR61_RS20720 NONE
        erpA 4385846 .. 4385872 - -19.5   -4.4078   GCGTCCCAACGAAAA         GGCCCTTCGGC GCATT GCCGAAGGGCC         TCGATCGCGGAGCGG 100 53
CWR61_RS20700 4381777 .. 4381787 -  -4.6  -3.30771   TGAGACCCTCGATAA                 GAGG CTA CCCC                 ACCAACTTAACACGC  51 19
CWR61_RS20695 4381041 .. 4381055 -  -2.8  -4.62069   CGTCTACCGCAAAAA               TGCC TCAAATC GGCA               TGAGCCGGGCTCATG  72 59
CWR61_RS20690 4379572 .. 4379593 - -15.9  -5.53991   CATCGATGAAAAAAA           GACAGGCCC TGGC GGGCCTGTC            TTGCCGGCGGCGGGC 100 59
        nrdR 4378657 .. 4378681 -  -8.6  -2.90194   ACGGCCGCAACCACA         TGCACCCCGGC GTGC ACCG-GGTGCA          GGACGCCATCGTGCA  53 330
        ribD 4376011 .. 4376023 -  -2.7  -3.63515   GTCGAGTGCTAACAA                CCTAT CGG ATAGA                CGCGCACCACGCGCA  50 112
CWR61_RS20665 4373785 .. 4373801 -    -3  -2.70932   GCCGCCGGTCAATGA              GCGAAT TCATG ATTCAC              CTCGCTCAGGAAGAC  40 31
CWR61_RS20660 NONE
CWR61_RS20655 NONE
CWR61_RS20630 4365146 .. 4365171 -  -5.5  -3.05597   GGCACGCGGGAAAAG         CGAATC-TGCGA TTC TAGCAGGATTCG         GGCCGGCTTGTCCCG  49 59
CWR61_RS20625 4364979 .. 4364996 -  -6.3  -4.10657   CCATATTTTTGAAAA             TCCCTGA AAAA TCAAGGA              CTTAGAAGAGCTGGC  66 37
CWR61_RS20620 4363642 .. 4363661 -  -3.4  -5.04385   GATACTTCCAAAAAA            TGCCCCCT TGCT AGGGGGTT             AGGGGGTAGTTATAC  81 35
CWR61_RS20615 4363026 .. 4363058 -  -3.4  -5.52023   AGCACGAAGAAAAAA     CAAG-GACGGTCTGC AAAT GCAGCCCATCACCTA      CTATGGAAACCCATT 100 207
CWR61_RS20610 NONE
CWR61_RS20600 4360031 .. 4360043 -  -7.7  -3.28041   AATGCGAAGCAGGAA                TACCC GTA GGGTA                AGATATTCACGAAAG  57 67
CWR61_RS20590 4357310 .. 4357360 -  -4.6  -2.64616   TGTGTATGCATACCA GGGGCGGTTCATGCCCGGCCGGCGC GCAA GCGCCCGCCG--CATGG-CCGGTCC GCGGCCCCTCGCGCG  43 46
CWR61_RS20585 4356964 .. 4356997 -  -4.6  -4.36411   CATGAATGACGAAAA    TCC-CGACCCGGT-GC TCAG ACGACCGGGTTGTGGA     CGGTAATCAGCTTGG  70 6
CWR61_RS20580 NONE
CWR61_RS20575 NONE
        ureC NONE
        ureE 4353639 .. 4353657 -  -2.3  -3.05521   ACGACAGGTGCAACA            GCGCGGCC AGCT GTCCG-GC             GTCAAGACTCGGGGT  42 27
CWR61_RS20560 NONE
        ureG 4352223 .. 4352255 - -14.7  -3.20164   CGACAGGCAAGGGAA      TGGCCGGCCCGCCCG GCC CAGGCGGACAGGCCG      GCGCGGCCGCAACGC  83 75
CWR61_RS20550 NONE
CWR61_RS20545 NONE
CWR61_RS20540 NONE
CWR61_RS20535 NONE
CWR61_RS20530 NONE
CWR61_RS20525 4343748 .. 4343760 -  -3.3   -2.8372   TATCCCCGACGAAAG                GGCGT CGG ACGGC                TAGCCCTCATATTAT  41 42
CWR61_RS20520 4342687 .. 4342701 -    -7  -3.01791   ATGTGCCCGGCAATA               CGCCCG CGT CGGTCG               GGGGCAGGCTCGCGG  52 217
CWR61_RS20465 4331004 .. 4331016 -  -3.3  -3.53811   TCGAGGCCGGCGAAA                GCATC GAG GAGGC                GGTGCACCGCGAGGT  51 315
CWR61_RS20440 4326087 .. 4326099 -  -6.9   -3.7456   CTATACCAAGAAATA                CGGCA AGC CGCCG                GCCACCTTCTCGGGC  61 274
CWR61_RS20395 4316625 .. 4316645 -  -3.9  -5.80248   TAAGAGACAAAAAAA            TGGCCACAG GGG CTGTGTTCA            ATTATGCTATTCCTG 100 80
CWR61_RS20390 4315674 .. 4315703 -  -9.9  -3.87583   AAACGGAAAGGGAAA       GGGCCGC-AGCCCC GGG GGGGCTAGCTGTCC       AGGCCGATATCCAGC  73 16
CWR61_RS20385 4314310 .. 4314352 -  -8.3  -2.78384   CTGGTGGCCATGATA GGCGCGGC-CAAGGCCGACG GCCA CATCGGCCCCGAAGAGCGCC AGCTGCTCGAAACCG  52 302
CWR61_RS20375 4313215 .. 4313266 - -11.4  -4.27316   CCCGGGAATGGAAAA CTGATCCCTCCGGTGCCTGTCCCC GCAG GGGGACTGGCACTGGCCAAATCCG ACCTCCGGTGCCTGT  88 176
CWR61_RS20355 NONE
CWR61_RS20350 4308639 .. 4308653 -  -3.4  -4.13767   TTCTTCATGCGAAAA               CGTGGC AAG GCCGCA               CCGACGCGGTGATGC  60 172
CWR61_RS20345 NONE
CWR61_RS20340 4304448 .. 4304460 -  -4.7  -2.57344   GATCTGGCGCATAAG                CGGTG CTA CTCCG                AGGCGGGCGGCGCGA  43 18
CWR61_RS20335 4303694 .. 4303711 -  -8.3  -3.54935   CAAACCGCCCTTAAA             GCGCCCG CCCG CGGGCTC              AGCCAGGCTGCCCCG  62 24
CWR61_RS20330 4303521 .. 4303555 - -20.9  -3.54489   GCAACCGGAAATGAA    GAAGGGCCGG-CGCTT TTGC AAGCGACCGGCCCTTC     TGGGATGCTGGTGGG 100 34
CWR61_RS20325 4303048 .. 4303098 - -16.8  -2.58999   CGCGCAGACAGCAAG CGGCCGTC-CGCGCGCGGCGCAT CCTAAC ATGCGGTGCGCGCGGGCCAGCCG GCCGCTTCAATAGTA  81 32
CWR61_RS20320 4301553 .. 4301598 -  -3.8  -3.86822   GAAGCCTTCGAGAAA CTGGGCGCGCCGCC--CCTGCC CGAG AGCAGGTAGGCGGCTTGCGCGG GGCTAGAAGAAGCTC  58 28
CWR61_RS20300 NONE
CWR61_RS20295 NONE
CWR61_RS20285 NONE
CWR61_RS20280 4293512 .. 4293549 - -14.7  -3.15699   ACGCATCTATGAAGA   TGCCGTGGCCGACTTCG TGCG CGACGCCGGCCGCGGCT    ATGCCGGCCGCCAGG  77 87
CWR61_RS20260 NONE
CWR61_RS20255 4288964 .. 4288988 -  -4.8   -4.2803   CATGCTAACGGAAAA          CCCCCCGCCG ACGCA CCCCGGGGGA          GACCCGCCCTTGACC  68 45
CWR61_RS20250 4288396 .. 4288423 - -16.3  -5.04385   GACAGGCCCAAAAAA        GCCCCGC-GGCC TGTGC GGCCAGCGGGGC        TGGTGCGGCGCCGGG 100 51
        fusA 4285935 .. 4285981 -  -8.6  -4.56597   CGCCGCCTGGAAAAA CGCATCGCGGCCCGCGACGAC AAGCGG GTCGTCGCGCAA-GCGCCGCG CTAGCCCCGCGCCGC  84 26
CWR61_RS20235 4284571 .. 4284624 -  -8.5  -2.87132   GGGTCGGCCGATACA TCGCGGGTATTGCCGGCGCGCG-GCC GCG GCCTCACCCGCCGGCGGCCCCCGCGC CGCGCCGCTCGCGCG  55 3
CWR61_RS20230 NONE
CWR61_RS20225 NONE
CWR61_RS20220 4281234 .. 4281279 -  -8.9  -3.32769   GGCCGAAACCATCAA GGTCGGCATCGCCCTGGCCGTG CAT CCCGAC-AACGCCACGCCGACC ACCGCCAACTTCGTC  59 105
CWR61_RS20210 NONE
CWR61_RS20205 NONE
CWR61_RS20200 4276220 .. 4276270 - -12.4  -3.76224   TGCGCAGTCATGAAA CCTGGAGCACGGCGTCGGGCTACT ACA AGATGCCCGAGGCGACGCTGCAGG CACGGCGCAATTTCC  78 524
CWR61_RS20180 4272373 .. 4272391 - -13.1  -3.05384   CTTCGGTTGATGCAA             CGCGCCG TCAGG CGGCGCG             TTGCGCCACATCGGC  72 14
CWR61_RS20170 4270306 .. 4270349 -  -3.6  -3.28712   GGCCGCCGGGCAGAA CCCACAGGCCGTCGTCGACGC GCC GCGCTGGCG-CATCCTGGAGG ACAACCGCACCGTCA  47 230
CWR61_RS20105 NONE
CWR61_RS20100 4257453 .. 4257492 -  -5.6  -2.66787   GCAACAGCGAGATCA  GCAGCG-CGCGGATGCC CACCAGC GGCGTGCGCGACGATGC  GCGCGAACGCTCAGC  46 36
CWR61_RS20095 4255429 .. 4255461 -    -7  -3.62518   GCAAATATGCCGAAA     CGC-ACGGGCTGACCG CCT CGGTCA-CCGGCAGCG     CCAATGTCGGCCTGG  60 524
CWR61_RS20085 4252984 .. 4253012 -  -4.4  -3.44622   GACCCGCAGAACGAA        GTGCGCTGGCCG CTGAC CAACCAGCGCGG        GGAATCGGTCGAAGT  49 329
CWR61_RS20075 4251440 .. 4251462 - -14.8  -2.72344   CTGGATGCGCAAGGA           CCTCGGCCTG GTA CTGGCCGAGG           CGCGCAACAACGGCG  70 196
CWR61_RS20050 NONE
        zapA NONE
        ssrS 4245318 .. 4245334 - -10.1  -2.53995   AGTCATCCGAAGGCA              GGCCTGC GAT ACAGGCC              TGCCTGGATAGATGC  58 35
CWR61_RS20035 4244321 .. 4244337 - -15.1  -3.16564   GTGGTATTCGAGCAA              GCCCCGC GCG GCGGGGC              AAGTGAGCGCCATGT  77 185
        ilvD NONE
CWR61_RS20020 NONE
        msrA 4240970 .. 4241002 -   -25  -3.53224   GACCCCTGCCGCAAA      CGACGAGGCCCACC TTCAC GGTGGGCCTCGTCG      TTTGCGGCGCGCGTT 100 52
CWR61_RS20005 4239101 .. 4239123 -  -9.1  -3.51232   CCCCTCTGAAATGAA           CCGGCCC TTTTATTCC GGGCCGG           CTGGACGAGGGCAGC  65 118
CWR61_RS20000 4236715 .. 4236736 -  -2.9  -2.91912   CGACTGAGCTACAGA           CCCGCGAAA CCTC TCTCTCGGA            TCAGCAGCCACCGAT  42 102
CWR61_RS19995 NONE
CWR61_RS19990 4236452 .. 4236490 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCCTGG  64 80
CWR61_RS19985 4233218 .. 4233228 -  -6.8  -3.65314   TTGAATCTGGAAGAA                 GCAC AGC GTGC                 GCCCGGCAGTCGGTT  59 127
         rrf 4233009 .. 4233043 - -19.5  -4.56597   GCGTCCCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CWR61_RS19975 4231571 .. 4231591 -   -14  -4.54727   GCCGGCAAACGAAAA            CGGCTGGC ACGAA GCCAGCCG            TTGCGAGCGGAACCG 100 55
CWR61_RS19965 4229667 .. 4229680 -  -5.2  -2.84839   GATAGACATGGAAAG               GGCC TCAATC GGCC                AAAGGCATGCCGCGC  45 16
CWR61_RS19960 4228150 .. 4228202 -  -9.8  -3.61398   GGCCTTCCTGAACAA CGTCGTCAC-CCAGACCATCGCCGCC GAA GGCGACGGCCG-CTGGCGCGACTACG TCGGCGGCTACGACG  67 419
        rnpB 4226185 .. 4226205 - -19.7  -2.52464   GGGCGCCGTAAGCCA            GCCGGCCGG AAT CCGGCCGGC            TGTCATGAAAATGCA  89 41
        mraZ NONE
        rsmH NONE
        ftsL 4224123 .. 4224144 -  -2.9  -4.15044   GGGTTGTCGAAGAAA           GGCACCC-GC CTC ACTGGACGCC           TCCGGCGGGCTGATT  60 14
CWR61_RS19930 NONE
        murF NONE
CWR61_RS19920 NONE
CWR61_RS19915 NONE
        ftsW NONE
        murG NONE
CWR61_RS19900 NONE
CWR61_RS19895 4212263 .. 4212275 -  -3.3  -2.87132   GCGTCGTTCCACACA                GAGCG TCC CGTTC                AATCTTGTCGCGCCG  41 24
CWR61_RS19890 NONE
        ftsA 4210095 .. 4210106 -  -3.6  -3.55622   GTGAATCGCCTCAAA                GCCG AAGC CGAC                 CGTGGTCCGCAATGG  49 128
        ftsZ 4208746 .. 4208772 - -10.1  -3.41988   TTTTATTGAAGAACA         GGCGGACCG CTCCGACCC CGGCCCGCC         GGGGAAAGGGCGGGC  67 88
CWR61_RS19875 4207629 .. 4207657 - -14.6  -4.72272   CGTCCCCACCAAAAA        GCCTATGGCCGC TCAGC GCGGCCATAGGG        CGAAAACCGATATCG 100 52
CWR61_RS19865 4205972 .. 4205997 -  -5.4  -3.53761   GAACCCGCTGGGAAA         CGATCCAGTT TAACGC ACCTGGACCG          CAACGGCCTGCCGTG  53 78
        secA NONE
CWR61_RS19855 4202250 .. 4202267 - -10.5  -3.08966   TCAAAGGTCAGTGAA             GACGGCC TGCC GGCCGCC              GTGGATCACGCATGC  63 155
CWR61_RS19850 4200749 .. 4200801 -  -9.7  -3.17075   GTCCGCGCAACTGAA CG-CGGCGCAGGCCTTGCTGCGCGA ACTGG CCGC-CAGCGTGGCCGGCGCGGACG GCGCGCTGGCCGACC  60 454
CWR61_RS19840 4199735 .. 4199757 -  -4.8  -2.57132   GCTCTTTTCGATAAG           GGGCGC ATTATGACGCA GCGCCC           GCGCCGCGCGGGCTT  43 40
CWR61_RS19835 NONE
CWR61_RS19830 4197899 .. 4197930 -  -2.9  -4.18018   CCCTGGCAGGCAAAA      CCCGTTCACGGCG CGCGCC CGCCGTGAAAAAT       TTTTGCGCGCGCTCG  60 48
CWR61_RS19825 4196960 .. 4196981 -  -3.5  -4.37092   ACGGTTTCCAGAAAA           TCGGCCGCG TCGG CGCGGACAC            CCGCCTGGGCATCGG  67 209
CWR61_RS19800 4192116 .. 4192128 -  -6.2  -3.06796   CTGGACCTGATCGAA                CGCC GCATG GGCG                AAATCACGCGCCTGA  48 424
CWR61_RS19790 4189045 .. 4189063 - -11.7  -3.02144   CGACCTGCGGGAAGA             CACGCCG GTCAT CGGCGTG             GTCTACGACCCCAGC  62 515
CWR61_RS19780 NONE
CWR61_RS19775 4184011 .. 4184052 - -28.2  -3.49209   ATATGAAATGGATAA GACCCGATGCG-CGCCGGC AATGG GCCGGCGACGCATCGGGTC GGAAGGGAACGCGCC 100 62
CWR61_RS19770 NONE
CWR61_RS19765 NONE
CWR61_RS19760 4181314 .. 4181337 - -19.6  -5.00616   GGCCGGGTGAAAAAA          CCAGGCCGCC CGCG GGCGGCCTGG           CTGGATGCGAACCCG 100 68
CWR61_RS19755 4181085 .. 4181102 - -12.7  -5.26875   CGCGCAATGAAAAAA             GCCGCTC TCGT GAGCGGC              TTTTTCTTGCTGGCA 100 99
CWR61_RS19750 4179197 .. 4179211 -  -4.2  -3.34962   CGCGACACGGCACAA               TTGCGC GCG GCGAAA               GTTTCGCAGTTTCTG  49 521
CWR61_RS19740 NONE
CWR61_RS19735 NONE
CWR61_RS19730 NONE
CWR61_RS19725 NONE
CWR61_RS19720 NONE
CWR61_RS19715 NONE
CWR61_RS19710 NONE
CWR61_RS19705 4170868 .. 4170884 - -11.5  -3.28712   GCCGGGTGTCCACAA              CCCCGCG ATG CGCAGGG              GCTTTGCCCTTGACC  68 416
        soxR 4170074 .. 4170091 -  -4.7  -3.72576   CGCGTCTGCATGAAA             GGCACCG AGGC CGGCGGC              GGACGCTGCGTCGCG  58 273
CWR61_RS19685 4169072 .. 4169097 -  -5.4  -3.34398   GCGCGGGCGCAAAGA         CCGGC-GCACC ATCGG GATACAGCCGG         CAATACTGCCTTACG  51 55
CWR61_RS19680 4166660 .. 4166715 - -14.5  -3.02144   GCAGCGGCTGGAACA GGGACGCCGCGACGGCGAGATCGGC CCGGAT GCCGACCTGGCCGCCCTGGCGGCCT TCTACGCCACCGTCC  74 161
CWR61_RS19670 4165252 .. 4165268 -  -4.3  -3.14132   CCGCTGCTCTACCAA              CTGAGCT AAC AGCCCGG              CGATTGCTGCCTGTC  45 140
CWR61_RS19665 4165151 .. 4165180 - -17.3   -5.0925   GCCGAAAAGCAAAAA       GGCCGTTAGTGAC TACT ATCACTAACGGCC        TTACAAATCATGGTG 100 36
CWR61_RS19660 4164809 .. 4164845 - -12.3  -4.56597   TTCCGGCTCTAAAAA    CCAAGGCCTTGCAACTC GAT GCGTTGCAAGGCCTTTT    AAAGTTCGTACTGCT 100 24
CWR61_RS19630 NONE
CWR61_RS19625 4158050 .. 4158064 -    -7  -3.55622   GGGAAGCTGCTGAAA               GCCGCG TAA CGCCGC               CGCCCTGCATATGCG  57 114
CWR61_RS19610 4154471 .. 4154488 -  -4.8  -3.15544   CGCCACGGCCATCAA             CCGCCT GAGCTG AGACGG              CGCCGCGCGCCGGTG  47 90
CWR61_RS19600 4151796 .. 4151806 -  -6.8  -3.09516   CGCCGCAGGATGTAA                 CCGA GCA TCGG                 CCGCCCCTTGTGGAT  51 101
CWR61_RS19595 NONE
CWR61_RS19590 NONE
CWR61_RS19585 NONE
CWR61_RS19580 4146854 .. 4146865 -  -4.4  -2.78679   GTCGTTCATGGAAAC                CTTC CGCT GAAG                 TAGGGGCTGGGGAGT  43 48
CWR61_RS19575 4145345 .. 4145360 -    -6  -3.99444   AAGAATAGGTACAAA              CCCGGC GAAG GCCGGC               AAGGCGTTTCTTGCT  64 133
CWR61_RS19570 NONE
CWR61_RS19565 NONE
CWR61_RS19560 NONE
CWR61_RS19555 4141590 .. 4141606 -  -2.9  -2.99649   ATAGGGCTAGACATA              CGCTTCC TTC GAAAGTG              AATCGACGATGTGTT  42 41
CWR61_RS19550 4139844 .. 4139890 - -15.1  -3.77219   ACGACTCAATCCAAA GCGGATG-GCAGCGCCGGCGCGG ATA CCGGCCCGGCGCCGCGCACCC-C ATGCATCCCGCGGCG  89 53
CWR61_RS19545 NONE
CWR61_RS19540 4137545 .. 4137562 -  -6.9   -3.7282   CGACGGTAGGAACAA             GACCGGC AGGC ACCGGCC              CGACCATGCTAGCAA  62 502
CWR61_RS19530 4136818 .. 4136871 -  -2.9  -3.61178   CGTACTCATCGCAAA CTCCCCGCGACCGCGTCCGCCAGCC GGCATG GGC-GGCGGACGC-GCCGCCTTGCC TGTTACTTGACCGCG  51 28
CWR61_RS19525 4136305 .. 4136347 -  -9.9  -2.79188   CATCGAAGGCAACTA CGCCAAC-GGCCG-GCGCG GCACGCT CACGCCCGACCCGCTGGCG CTGGAACTGCAGCGC  56 148
        lptD NONE
CWR61_RS19500 NONE
        rsmA 4128831 .. 4128845 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGATA  61 163
         pyk 4124758 .. 4124776 -  -3.1  -3.61398   GGGCGCCTGGAAGAA            GGTGCCCG TCTA CGAG-ACC             TTCATCGCCGGCGCC  50 470
CWR61_RS19470 4121174 .. 4121204 -  -4.4  -2.73364   GTTCGAGCGCAACGA       CCGCTACCCGGACG CGC CGGCCGTGCCGCGC       ACCATCCTGTGCAAC  40 453
CWR61_RS19430 4113507 .. 4113522 -  -4.6  -3.01924   CACTGCTGGCCAATA              TGGTCG AAGG CGGCCA               GACGCCCATCGAGAG  46 248
CWR61_RS19400 4108330 .. 4108364 -  -5.6  -4.28994   GAGGATGGATGAAAA    TGGGC-GCGCGGCGG TCGGAC CCGCCGCGCCATGCA     GCCTGTTTTATTTGC  70 33
CWR61_RS19395 4106637 .. 4106681 - -18.6   -2.5719   GAAAAACGAATACAC CTACATGGGTGCCCGTCCCC GCACG GGGGACGGGCACCCACAAAT CCCTGGGGTGCCTGT  86 125
CWR61_RS19390 NONE
CWR61_RS19385 NONE
CWR61_RS19380 4103646 .. 4103699 -  -8.1  -2.82895   TGGCCGACGAACAAC GCC-GCCGGCGCGG-GGCCCG-GC GCGGCCATG GCTCAGGCGTCCGGGCCGGCCGGC TCGCCGGCTCGCGCC  52 4
CWR61_RS19375 4102475 .. 4102489 - -12.8  -3.14931   CCCACGGTGCAGGAA               GCCGGG GTG CCCGGC               TACGAAGCCTCGGCC  68 296
CWR61_RS19345 NONE
CWR61_RS19340 4096343 .. 4096363 - -11.1  -3.61715   CAGGTGCGCGAAGAA            CTGGAAGGC CTG GCCTGCCAG            CTGTTCGCCGAACAC  71 438
CWR61_RS19325 NONE
CWR61_RS19320 NONE
CWR61_RS19315 4089864 .. 4089880 -  -3.5  -3.14132   GGCGTGCTGGACGAA              CTGGCCG CCG CGCCCGG              CGTACTCGCCTGCAC  45 427
CWR61_RS19290 4085683 .. 4085708 -  -9.7  -3.02144   GCACCTTCGGCAAGA         GTATCTGTCCC CGCG GGGACAGGCAC          CGAACCCTGCCTCAG  59 37
CWR61_RS19275 4082003 .. 4082032 - -21.5  -2.62616   CGATGGCGTACAGCA       GGGTGCCCGTCCC GGCT GGGACAGGCACCC        TTGCCGCGGGTTTCG 100 72
        fumC NONE
CWR61_RS19250 4076367 .. 4076413 - -10.1  -5.45652   AGGCGGAATAAAAAA CGCGCGCAAGAAAAAAGCGCCC CGCG GGGCGCTTTCGGCGTGCACG-G TGTCAGGCAGCCATC 100 39
         ggt 4073195 .. 4073214 -  -5.6  -3.72576   TCGCGCCGTATGAAA            CCCTGC-CC ACC GGCGCCGGG            CCGATTTTCCTGGCG  58 413
CWR61_RS19220 4068592 .. 4068633 - -12.3  -2.78463   AGCGCGTGGACCACA CCATGACGGCTGCCGACCTG ACC CAGGTGGGCAGC-GACATCG AATCGCTGGTACTGT  63 113
CWR61_RS19185 4062291 .. 4062330 - -32.4  -3.28924   GACCTCCTTCCATAA  GAAGGCGTGCCTGTCCCC GTAT GGGGACAGGCACGCCTTC   TTACCGGGAATCCGG 100 122
CWR61_RS19170 NONE
CWR61_RS19165 4057917 .. 4057952 - -20.4   -3.3062   GTGAAACACCATTAA    CCCGGAGCCTGTCCCC GCAG GGGGACTGGCTCCGGC     AAACTCCTCCGGTGC 100 182
CWR61_RS19145 NONE
         eda NONE
CWR61_RS19135 4047778 .. 4047814 - -13.7  -3.73106   CGAAAATCTGAATAA    CTCGGCATTCTAGCCTG AAA CAGGCTGGACCGCCAAG    CCGCCCCGCTTACCC  86 35
CWR61_RS19130 4047525 .. 4047546 - -18.7  -5.14563   CCGCGCATGAAAAAA           GCCGCCGGC AAGG GCCGGCGGC            TTTTTACCCGCAAGC 100 49
CWR61_RS19120 4045372 .. 4045401 - -11.3  -2.87132   GTTTGTGCCGATACA       GGCGCCCCCCCGC CCGC GCAGACAGGCGCC        GGCGCTCAGGCCACG  64 31
CWR61_RS19115 NONE
CWR61_RS19110 NONE
CWR61_RS19105 NONE
CWR61_RS19100 NONE
CWR61_RS19095 4039716 .. 4039746 -  -3.9  -3.71848   GCTGGGCATGAAGAA      GCTGGACATCGCCGC CCT GCGGCG-CG-CCTAC      GACGGCGCCTGAGCG  56 50
CWR61_RS19075 4035926 .. 4035940 -  -2.8  -3.67558   GATATACCGGAACAA               GCCT TGATTGT AGGC               CGGAACCCGCCGGCC  51 65
        ettA NONE
CWR61_RS19065 4033511 .. 4033523 -  -6.9  -3.06969   GAAGCGAGCGCAACA                CGCAC AAA GCGCG                TCCCATGAAACTTAG  51 154
CWR61_RS19060 4033191 .. 4033206 - -11.8  -5.14563   GCGCCCATGAAAAAA              CCCGGC CGAA GCCGGG               TTTCTCGTTCAGGCG 100 52
CWR61_RS19035 NONE
CWR61_RS19030 NONE
CWR61_RS19015 NONE
        recQ 4020237 .. 4020264 - -16.2  -3.14344   GACGGCGCGCACGAA        GTGGCGCGCCGC TCGC GCGGCACGCCGC         GCATCGCCAACCGCC  80 412
CWR61_RS19000 4018396 .. 4018414 -  -6.6  -3.40403   TTCCGCCGATGACAA             GGATACGC ATC GCGCAGCC             CCCTGTTGCATCATT  55 92
CWR61_RS18995 4017261 .. 4017291 -  -6.6  -4.64676   GCATCGGCAAGAAAA       CCGCGGAGCGCCTG CTG CTGGAGATGCGCGG       CAAGCTGGGCGCGGA  78 228
CWR61_RS18960 4011436 .. 4011489 -  -6.5  -3.18264   CTGGTCACCGAGGAA GGCTGCGAACTCA-TCACCCGCGGCG TGC CGGTGCAGGCGCGCGAGATCGAAGCC CTGATGCGCGAATAG  54 50
CWR61_RS18950 4008621 .. 4008645 - -14.3  -2.87132   TGCGCGTCGGACATA          CCGCACCCTGC ATG ACAGGATGCGG          CAGATGGGTGCTCTG  73 218
CWR61_RS18945 4008021 .. 4008059 - -13.1  -4.74539   AAGAACGGAAGAAAA  GCGCCCGGACGGCCGC CGGCGTGC GCGGCCGCGCGG-CGC   GGTTGGGGAGGGGGA 100 63
CWR61_RS18940 4006689 .. 4006727 - -14.5  -2.79831   GTCATCCGAAAACAG   CCAGCAGGTGGCGAGGC GCGAA GCCTCGCCGCCTGATTG   TAGTTGACGATGCGC  77 58
CWR61_RS18935 4005512 .. 4005523 -  -3.6  -3.87373   CACATCGTCGAGAAA                CCCG CCCC CGAG                 CAAGCCCCCACCACC  58 299
CWR61_RS18925 NONE
CWR61_RS18920 4002370 .. 4002384 -  -5.6  -4.08767   CGTACTTCCTGAAAA               CCATGC GGC GCAAGG               TGCTGGAGAAAGCCA  63 407
CWR61_RS18895 3999082 .. 3999098 -  -5.1  -2.62184   CTCTGTCCGACATGA              TCAAGCG CGC CCCTTGA              AGAAGCGTTCGGCCC  43 9
CWR61_RS18890 3998704 .. 3998718 - -12.8  -4.27316   CGCCCCAAGGCAAAA               GCCCCC TCA GGGGGC               AGCAAGCCCGCGCAG  95 57
CWR61_RS18885 3996940 .. 3996958 -   -11  -3.13403   GCTGGGCGAGGAAGA             CGTCGAGA ACT TCCCGACG             CTGCTGGTGCAGGCG  64 189
CWR61_RS18875 3995838 .. 3995850 -  -4.7  -3.45031   TCCGGAAAAAGTGAA                GGCCC CGG GGGGC                ATGCGGAGCAATGCG  53 41
CWR61_RS18870 3994931 .. 3994946 -  -3.2  -4.02132   TGTGAAATCTATAAA              GCCGTT TGGC AACCGC               TATTTTTCCCGCCCC  58 81
CWR61_RS18865 3993957 .. 3993974 - -14.1  -4.18762   AACCGCCACGCAAAA             GCGCCCC GTCC GGGGCGC              TTTTGCTATTCGCCG  93 46
CWR61_RS18855 3991900 .. 3991920 -    -9  -5.47218   CCCGAGGCAAAAAAA           GAGGCCACC CGAA GGTGGCC-C            GAATTCCAGCTCTGC 100 95
CWR61_RS18825 3987002 .. 3987024 - -20.6  -2.71144   GACGTGCTGGAATCA           GGCTGGCCCG AAC CGGGCCAGCC           GCCCCTCATGGTGTC  83 159
CWR61_RS18720 NONE
        folD 3966639 .. 3966649 -  -8.2  -3.28712   TTTTGGCGCGCACAA                 GGGC TCG GCCC                 TGGCCATGATGGTCG  59 336
CWR61_RS18695 NONE
CWR61_RS18690 NONE
CWR61_RS18685 3959047 .. 3959057 -  -6.8  -3.07816   GTGCGAGTTATCCAA                 GGAG ACG CTCC                 CGTTCGATATCGACG  51 7
CWR61_RS18680 NONE
        purU NONE
CWR61_RS18670 NONE
CWR61_RS18665 NONE
CWR61_RS18660 3954254 .. 3954275 - -14.5   -5.1287   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTCTTGCGT 100 53
CWR61_RS18650 3952846 .. 3952868 -  -9.8  -3.40403   GGCCCGCCAGGACAA           CGGCCTGTAC GAC ATGCAGGCCG           TGCTGGGCCTGTAGG  64 76
CWR61_RS18635 3950911 .. 3950932 - -15.9  -5.82388   AAACCGCAAAAAAAA           CCTCCAGGC TTGC GCCTGGAGG            CAGGGTTGGTCGAGC 100 48
        hrcA 3947129 .. 3947169 -  -4.6  -3.54382   GCGAAGAAACACGAA GACACCTCTCAGGGCGCCGC CCC GCG-CGCGCAG-GCGGTATC CGGCCCGAAATGGGA  53 41
CWR61_RS18615 3945995 .. 3946012 -  -8.3  -2.52676   CATTCGCGGAATGGA             CCGGCGC GCTC GCGCCCG              CCGCTTCAACCACAG  52 50
CWR61_RS18610 3945614 .. 3945631 - -12.7  -2.73542   TTCAAGCGCCAACGA             TGGGGGC GAAT GCCCCCA              TTTCAAGTCCGGTAT  68 107
        grpE NONE
CWR61_RS18600 3944607 .. 3944622 -  -4.6  -3.14564   TCAGTCCCCCAGTAA              CTGGGG TTGG CCACAG               GGTTTTTCAAGGCCC  47 32
        dnaK 3942554 .. 3942596 - -18.5  -3.27298   GTTCTGAATCATCAA CGCG-CGCGCCCGGTAGCTG GAAT CAGCTACCGGGCGTATCGCA CGTCATCGTCCGGCC  93 42
        dnaJ 3941311 .. 3941329 -   -16  -4.89063   CCACGCAAAAAGAAA             CGCCGGCA TGA TGCCGGCG             TTTTACGTGCGCACG 100 87
CWR61_RS18580 NONE
CWR61_RS18575 3936686 .. 3936725 - -14.3  -2.83164   GCATGGACGACCACA  TCGC-GCGCGTGGAGGAA CTGTT TTCCGCCGCGCGCAGCGA  GTTCCGCCACCTCGA  68 426
CWR61_RS18560 NONE
CWR61_RS18555 3934099 .. 3934127 - -16.7  -4.42788   CCGAACGCTAGAAAA        GGAAAAGCCCCCG GAT CGGGGGCTTGCCC        GGCGCCGCCGGCACC 100 43
CWR61_RS18545 3932152 .. 3932175 - -12.4  -5.02074   CCATTCGGCAAAAAA          CCCGCTACCCC ATG GGGGC-GCGGG          TTTTTCGGCTGATGC 100 60
CWR61_RS18540 3930944 .. 3930959 - -10.4   -4.1585   CCAGAAGCCGGAAAA              TGGCCG AGGT CGGCCA               GCACATTGACGGAAA  79 95
CWR61_RS18535 3929579 .. 3929618 -   -18  -2.78679   CCTGCTGACGGAAAT  CGGCGTCGGCTAC-CGC TACGCGG GCGAGTAGCCGACGCCA  GCTAGGCTGCCCGCG  89 27
CWR61_RS18500 NONE
CWR61_RS18495 3918396 .. 3918420 -  -9.2  -3.05384   CGGTCGGCCATTGAA         GGCGCGGCCGC GCTA GCGGCCGC-CA          GGCTCGCGCAGATAG  60 13
CWR61_RS18475 NONE
        lolA 3913337 .. 3913390 - -12.1  -3.28712   CTGCGTGGCCTACAA GCCCGCCACGCGCG-CGTCCCCGGCC GAG GGCTGAGGCCGGCCCGCCGCGCGGGC GCAGACGGCCTGGCC  71 40
CWR61_RS18420 NONE
CWR61_RS18415 3900809 .. 3900838 - -18.1  -4.56597   CGGGTGGCGCAAAAA       GAAAAACGGAACC CGCG GGTTCCGTTTTTC        ATTCATTCGCGGCGC 100 48
CWR61_RS18410 3900176 .. 3900193 - -14.1  -5.31059   AGATCAATGAAAAAA             GCCGCCC GGAT GGGCGGC              TTTTTTGCGGCACGG 100 165
CWR61_RS18395 3898656 .. 3898688 -    -2  -3.62046   GCAGGCCGGCAAGAA     TC-GCC-TGCACCTGA TCG CCAGCCGCACGGCTGA     CGCGTGACGGGCCCG  50 48
        pgaA NONE
        pgaB NONE
        pgaC NONE
        pgaD 3891300 .. 3891313 -  -3.1  -2.80579   TCCGCAAAATAAGAC               GTGAC ATAT ATCAC                ACTCTTGCAGCGGCC  41 53
CWR61_RS18365 3890717 .. 3890738 -  -7.3  -2.78463   AGGCGCTGCAGCAGA           TCACGC-CCA GCA TGGCGCGCGA           GATGGTGTTCTTCCC  49 352
CWR61_RS18350 NONE
CWR61_RS18345 NONE
CWR61_RS18340 NONE
CWR61_RS18335 3885359 .. 3885382 -  -9.6  -4.56597   GCCTGTGCCGAAAAA          GGACC-ATCCG TCG CGGATTGGCCC          TCGTTCCTTGCGCAC  86 49
CWR61_RS18285 NONE
CWR61_RS18280 3871571 .. 3871584 -  -3.7  -2.69964   GTTTGAACGAGACTA               GCGGG CCGT CCAGC                CGCCGTCGACGGAAA  42 9
        yaaA 3870738 .. 3870762 -  -6.4  -4.53703   AAAAGAACAGGAAAA         CGCGCAA-GCC TGCC GACATCGCGCG          TCCTCGTCAGGCCTG  79 32
CWR61_RS18270 3869214 .. 3869227 -  -4.5  -3.73068   GCCCGAATTCAATAA               CCTGC TGGT GCAGA                ACCACATCCTGGCCT  58 313
CWR61_RS18260 3865075 .. 3865085 -  -5.4  -3.07876   TCAGCACAGAAATCA                 CATG TTT CATG                 GTGGCCTCCTTACAG  47 35
        ilvN 3864567 .. 3864594 -  -8.2  -2.53876   GTTGATGCTAATGCA        GGGTGGCGCGCC GCCA GGCGCGCCGGTC         AGATTTTCAGTATCC  53 24
        ilvC 3863438 .. 3863488 - -14.4  -5.45802   CGCGGAAAAGAAAAA CGCGCCCCGCGGGGCGCGTCTGGA CCA TCCTGCCGGACCCTGCCGGGCCCG GCGCGGCCATGGCCT 100 41
        pssA 3862372 .. 3862385 -  -8.1  -3.25823   GCCGGCCGAGATCAA               GCAGG TCGG CCTGC                CCAGCGTGCGCCAGG  55 199
CWR61_RS18230 3861387 .. 3861422 - -16.8  -5.04601   CTTACAAATGAAAAA    CCGTGGCCGTTGCGAC ATGC GTCGCCCCGACCACGG     TTGCGTCATGGGGAG 100 54
         pnp 3859159 .. 3859176 - -14.1  -4.66163   ATGCGGACGTAAAAA             CGGCGCC CGCG GGCGCCG              TTTTTACGTCAGGAA 100 50
CWR61_RS18220 NONE
CWR61_RS18215 3856769 .. 3856791 -    -7  -3.73775   CGCAGCCTTACGAAA          CGGGTCTGC GCTACA GC-GACCCG           AAGGATTTCCACGTG  64 337
CWR61_RS18200 3854802 .. 3854834 - -15.5  -4.63486   ACCGGGGCAAGAAAA      TCCGGGCGCACCGGA CAA TCCGATGCGCCCCGC      CGTCCGGCTGGCGCT 100 39
CWR61_RS18195 3853941 .. 3853953 -  -5.5  -3.02074   CAAAGACATTACAGA                CTCCG GAA CGGAA                ACTTAAGCTGCGGCG  48 28
        secG 3853411 .. 3853422 -  -5.8  -3.68529   ATTCTAGCATGTAAA                TGCC CATG GGCA                 AAACCGTCAGGGCGG  57 73
CWR61_RS18185 3853180 .. 3853206 - -14.5  -5.04325   CCGAAACGACAAAAA        GCCCAC-AGGCG CTGG CGCCTTGTGGGC         TTTTTTTGCTGGCTT 100 84
CWR61_RS18180 3850093 .. 3850105 -  -4.7  -3.34398   GGTGTTCGCCAAACA                GGTCG AAT CGGCC                AACCAGCTGCGCTAC  49 483
CWR61_RS18170 3848200 .. 3848220 - -18.3  -3.87994   AGTGATGCCCACAAA            CCGTCCGCG CCG CGCGGACGG            ACGCTACGCCGCGGA  95 29
CWR61_RS18165 NONE
CWR61_RS18160 NONE
CWR61_RS18155 3844154 .. 3844169 - -11.8  -3.05715   AACCTCCTGAGGTAA              GCCGCC GGAC GGCGGC               GGTTCAAGCGCCGCC  69 29
CWR61_RS18150 3842692 .. 3842722 -   -11  -3.03624   GCACCAATGAAACCA       CCGTGCTCGCCGCC ATC AGCGGCATGCACGT       ACTGTTCATCGCCAC  62 455
CWR61_RS18120 NONE
CWR61_RS18115 NONE
CWR61_RS18110 NONE
CWR61_RS18105 3834066 .. 3834091 -  -7.5  -3.14132   GCGCTGCGCGAGGAA         CAG-CAGCGGAG CAT CCCCGCCGGCCG         CTTCGGCCGTCCCGA  53 215
        metC NONE
CWR61_RS18085 3829927 .. 3829985 - -22.3  -4.56597   TTCTTCGTTGAAAAA GACCGCGCGCCGCGGGCGCGGGCCGAACG CAA CCACCGGCGC-CGCCCGCGGCGC-CGGAC CTGCTCGAATCGGAA 100 66
CWR61_RS18080 NONE
CWR61_RS18075 3826327 .. 3826345 -  -4.6  -3.29144   GCATGTTCCCTACAA             GGACAT GACGGCG ATGTCC             GACCTGGCGGCCGGA  49 493
CWR61_RS18050 3819378 .. 3819392 - -12.8  -3.84451   GCGCGCAAAGGGAAA               GGCGCG CGG CGCGCC               CGTTTGCGCGCCATC  86 108
         azu 3818800 .. 3818830 - -13.3  -3.54424   CCGGACCGCCTGAAA      GCGCGCCCCGGCGGC AGC GCCGCCAGGG-GC-C      ATGCCGGCGCTCAGT  78 36
CWR61_RS18015 NONE
CWR61_RS18010 3808502 .. 3808520 -  -4.4  -3.24411   ATGCGGTCAAAGATA             GCGCAGGC GCG GCGTGCCC             CGCAAGGCGCATCAG  47 37
CWR61_RS18005 3807516 .. 3807538 -  -3.3  -3.38046   TGGGTATCCGAAATA           TGCAGCACG CGCAT CATGCCGCC           TCCAGCCGCTGCCCG  47 16
CWR61_RS18000 3806686 .. 3806711 -    -4  -3.07259   AACGACGGCCAAAAG        GTTCACGG-GCG GCAT CGCGCCGCGA-C         AGGCCTCATGCTCGC  45 31
CWR61_RS17995 3805703 .. 3805718 -    -6  -2.66326   TGAACGGGAAATCGA              CCGCAC CCTG GAGCGG               TTCAGCGACGGCAAG  45 207
CWR61_RS17975 3802721 .. 3802756 - -19.8  -4.24326   AAACATGATTCAAAA    GCGAAAAAAGCCGCCC CGAA GGGCGGCTTTTCACGC     GCGGGCACGAGGCCC 100 86
CWR61_RS17970 NONE
CWR61_RS17965 3801734 .. 3801750 -    -5  -3.05384   GGCGGCGCGATCGAA              CCGCGC CGCCC GCGCCG              GTGGCTCAGCGCGCA  47 31
CWR61_RS17960 NONE
CWR61_RS17955 3799797 .. 3799811 -  -2.1   -2.5655   TGGACTGATATGAAG               GATCA GCGGT CGATC               TCGCCAAAAACGATG  38 13
        nuoE NONE
        nuoF NONE
CWR61_RS17940 NONE
        nuoH NONE
        nuoI NONE
CWR61_RS17925 NONE
        nuoK NONE
CWR61_RS17915 NONE
CWR61_RS17910 NONE
        nuoN 3787979 .. 3787993 -  -3.4  -3.14132   TGCCCCGGCCATCAA               CCCAGC GAC GCCTGG               ATCACCTGCACGCAC  43 7
CWR61_RS17900 3787588 .. 3787604 - -13.7  -5.81032   GAAGGCGAAAAAAAA              CCGCCTC CTG GAGGCGG              TATCGCTGCGGCGGC 100 50
CWR61_RS17895 3785045 .. 3785066 - -15.1  -4.98531   GCCGGAAATGAAAAA           CGGCCCCCC TCGC GGGAGGCCG            TTGCGGGACCGCGGC 100 57
CWR61_RS17890 3782569 .. 3782585 - -15.1  -5.75342   CCGTGCCAAAAAAAA              CCGGCGC ATT GCGCCGG              TCTTTCCTGCCGTGC 100 49
CWR61_RS17885 3781473 .. 3781501 -  -7.4  -3.61398   TCTGCTGGTCAATAA       CG-CCGGCATCTC GCCC AAGAAGCCGGACG        GCCGCAAGCGCATGA  60 503
CWR61_RS17865 3777192 .. 3777221 - -23.7  -3.03006   AGTAAGCCACACATA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        ATGAACACTTGACGG 100 112
CWR61_RS17850 NONE
CWR61_RS17845 3771618 .. 3771649 -  -2.9  -2.89475   TATTGAGACATCACA     CCTA-GCG-GCCGGC CCTA GCCGGCGCGCGCCAG      CAGCACCACCACGTT  41 8
CWR61_RS17840 3770123 .. 3770144 -  -4.3  -3.03124   CGGCATCGTCGAAGA           CCCGGTCGCC CTC GGCG-CCATG           CTGGCCTTCATCTAT  44 463
CWR61_RS17830 3768168 .. 3768196 - -13.1  -3.14564   CCAGCTGCGCATGAA        TGCCTACGCCACC CAT GGCGGCGTGGACA        AGAAGCGCTTCGAGC  68 276
CWR61_RS17805 NONE
CWR61_RS17800 3762713 .. 3762739 -  -6.4  -3.15249   CAGATCGGCCAGGAA         GGCCACGGCAAG GCC CTCGACTCGGCC         CACTGAGAGCCGCTT  51 50
         smc 3757604 .. 3757625 -  -2.9  -3.28447   TCACTCATGAGAACA           TCCCGC-GCC TAA GGCAGCGCAA           ATCCGAAATATGGGT  45 42
CWR61_RS17785 NONE
        ligA 3754382 .. 3754411 - -19.5  -3.63515   GGCCACCGCCAACAA       CAAAATTGCCCGC GAAT GCGGGCAATTTTG        TTTCCGGCTGCGGGC 100 62
CWR61_RS17755 NONE
CWR61_RS17750 NONE
CWR61_RS17745 3750357 .. 3750367 -  -4.6  -4.07885   GATTCCCTGGGAAAA                 CGCC CTC AGCG                 CCCCAGCACCGGCCA  64 20
CWR61_RS17740 3748865 .. 3748888 - -19.6  -2.69977   ACACGGCACATACGA          CGCACCGGCC CTCA GGCCGGTGCG           AGGTGAAGCTGGGGG  90 102
CWR61_RS17735 NONE
CWR61_RS17730 NONE
CWR61_RS17725 3744788 .. 3744807 -  -7.8  -3.29461   CAAGGGCTTCGACAA            CGCCATCA TGCT CGACGGCG             CCGGCCATATCGCGG  55 391
        pncB 3732973 .. 3732994 - -12.9  -4.07687   ATGGGTTGGCGAAAA           CAGCCGGCC CTCA GGCCGGCGG            AAGCTGGAACACCTG  89 14
CWR61_RS17655 3732531 .. 3732588 - -12.8  -3.16564   GCTCTACGCCATGAA CGGCTGGCTGCCAAGACTGCGCCTGCCCC CGG GGGACAGGCAC-GCC-TGCCATC-AGCCG ATCGCGGCGGTGACC  72 19
CWR61_RS17640 3728698 .. 3728712 -  -4.2  -4.11216   CCCGGAGGGTCAAAA               GACCTA GTG TAGGGC               ACGCGGACGCCCCTG  62 65
        argE NONE
        trpB NONE
CWR61_RS17625 NONE
CWR61_RS17620 3724387 .. 3724417 - -16.3  -4.67353   GCATGCATGGAAAAA      TGACAACGCCCGGC CTGG GCCGGGCGTT-TCA       TGGCGATGCCGGCGG 100 47
CWR61_RS17615 3723633 .. 3723652 -   -15  -5.94713   AGCCCACAAAAAAAA            CCCGCCAG CGTG CTGGCGGG             TTTCAATGACTTGCC 100 60
CWR61_RS17610 3721927 .. 3721953 - -23.8  -4.67353   TCACTGACGCAAAAA         GCGGGTTGCGGC GTC GCCGCAACCCGC         TTTTTCTCCTGCTGT 100 68
CWR61_RS17600 3717250 .. 3717262 -  -4.1  -3.42809   AATACCACCAACGAA                TAACC CAT GGTCA                GGCCGTCTCCAGTTG  49 23
CWR61_RS17595 3716477 .. 3716534 - -15.6  -3.27408   TCCTACCCAAATAGA CGGCGGCGTGCGCCGCGCTATTCCGTCGC CGG GCGACGG--CAGCGCG-CGCAAGGCCCCG ATCCAGGTAAGACAG  86 77
        msrP 3715475 .. 3715491 -  -2.1  -3.14132   TGGGCGCCTCAGTAA              TTGGCCC GCA GGTCCAG              GCCCTGGTAGAGACT  42 2
        msrQ 3714564 .. 3714574 -  -8.2  -3.21099   CGCTGGTACGACGAA                 GCCG GCG CGGC                 CGCCCATCTGGCCCG  56 258
CWR61_RS17565 3711915 .. 3711942 -  -7.6  -3.88291   GATGACTCCTAGAAA        CGGGCCGCATTG TACG CGATCCGACCCG         AGTTGATCTCAATCC  67 34
CWR61_RS17560 NONE
        plsX NONE
CWR61_RS17550 3709569 .. 3709616 - -15.5  -2.50816   TCGGTATGGAGGAAT GGCG-GCGGGCGCGGCCACGCAC AGGC GCGCGCGGC-GCGCCCTTGCGCC TACATGCGGGCCAGC  77 25
        fabD NONE
        fabG 3707804 .. 3707837 - -13.9  -4.03234   GCGTTTCCACAGAAA    CGCGCGGC-CGG-GC TTGGAT GCGCCGCGCCGCGCG     CTTCTCACTATTGCA  93 33
CWR61_RS17535 3707302 .. 3707326 -  -7.7  -2.75074   CGGACCGCAAGACCA          CGGGAAGGCCG TTA CTTCCTCCCCG          CACGCGGACCGCACG  51 120
        fabF NONE
CWR61_RS17525 NONE
        rpoE NONE
CWR61_RS17515 3704283 .. 3704296 -  -9.5  -3.53012   CCGGCCGTGCGTAAA               GGGCC ATCA GGCCC                ATCAGCACCGCCATG  65 120
CWR61_RS17505 3701748 .. 3701772 - -21.5  -4.65895   CGGGCGAGCCAAAAA          CAAGGGGGCGC CAT GCGCCCCCTTG          TTGCGGCAACCAGCC 100 62
CWR61_RS17500 NONE
        lepB 3698987 .. 3699000 -  -3.7  -3.17392   TAGCGGTCAATGGAA               GCGGC CAAT GCGGC                TCAAGTCGCTGAAGT  47 3
CWR61_RS17490 NONE
CWR61_RS17485 NONE
        recO 3696724 .. 3696746 -  -4.7  -2.64803   GCAGCGTGAAAGTCA           TGGCGTGGC TCCGC GCCGCGCTA           CAGGCGCTGCAGCTC  43 23
CWR61_RS17475 3695436 .. 3695474 -  -7.9  -3.14132   CTGGGCTGGCAGGAA  CTGCTGCGGC-GCGGCGC GATC GCGCGGCTGCCGCGCCTG   CATGCGGTGGAACCC  53 355
        lptF 3687854 .. 3687907 -    -8  -2.78463   AGCTGTGCGACTACA CGCTGAT-GCTGTATGGCACGCCCG CGTAC CTGGCGCGCCATGCGCCGATCCGCG AGCGCGCCGACCTGG  49 415
CWR61_RS17425 NONE
        mmsA 3684326 .. 3684349 -  -8.2  -3.15544   CTGCAGGTTCATGAA          TTGGCCCCTGT TAG AC-GGAGCCAA          TTATAAGTAATATAG  57 98
CWR61_RS17415 3683333 .. 3683349 - -15.1  -4.64861   TCCGGCCAAAAGAAA              GCGCGCC GAA GGCGCGC              CGCGGGTCCTGCATG 100 54
CWR61_RS17410 3682742 .. 3682788 -   -34  -3.33315   TGAACACGTCCACAA GACGCCCAAGCAAAAGCGCCCC GAT GGGGCGCTTTTGCTTGGGCCTC AACTGGCGCGCCGGC 100 83
CWR61_RS17400 NONE
CWR61_RS17395 NONE
CWR61_RS17390 NONE
         acs 3675913 .. 3675943 - -14.7  -4.62069   TGCGCAGCCGAAAAA      CGCGCGGGCCGGTC GTGC GACCGGCCCG-GCT       GGCTACAGACTGACG 100 101
CWR61_RS17380 NONE
CWR61_RS17375 3673776 .. 3673800 -  -8.4  -3.01712   CGCGCTGGCCGAACA          CCGGCAGGCC CAGTC GGCCGGCCGC          AACGGCGTATTCCAG  55 161
CWR61_RS17350 NONE
CWR61_RS17345 NONE
CWR61_RS17340 3667714 .. 3667733 - -16.4  -5.83822   CACAGGCAAAAAAAA            GCGCCGGC TTAC GCCGGCGC             CTTACATACAAGGAA 100 50
CWR61_RS17335 NONE
CWR61_RS17330 NONE
CWR61_RS17325 3663706 .. 3663727 - -11.5   -5.1356   GTTGAGGAACAAAAA           GCGGCAGCC TCGT GACCGCCGC            ATTCAATACGCGCCG 100 28
        gsiB 3662051 .. 3662095 - -10.7  -2.80796   GGTCAGCATTGAAAT TCCCGCGACACCGGCGGGGGC CGCGC GCCCCCGCCGG-AT-GTGGCA TTGCCAGGTGTTACT  60 36
        gsiC NONE
        gsiD NONE
CWR61_RS17305 3659059 .. 3659071 - -10.5  -3.33261   CGGGAAGTGTCAGAA                GGCCG TCT CGGCC                AGCCACTGACGCCAC  67 7
CWR61_RS17300 NONE
CWR61_RS17295 3656286 .. 3656322 -  -4.2  -3.01712   CGGGTGGCGGTAACA   GTTGGCCGCGCGCCACG CCGG CGTC-CGCGCGCCCGTC    CATGTTAGGTCGCGG  44 103
CWR61_RS17290 NONE
CWR61_RS17285 NONE
CWR61_RS17280 NONE
CWR61_RS17275 3652041 .. 3652087 - -14.3  -2.89055   CAAACGCGGTAGACA GCGGT-TTCCGGCCGGTCCGCG CTAC CGCGGCCCGGCCGGATTACTGA CCATTAACGCAGGTT  73 29
        ftsB 3651621 .. 3651636 - -10.4  -6.15259   CAAGGCAAAAAAAAA              CTCCCC TGGC GGGGAG               TTCCGGCGCGTCCGG 100 42
CWR61_RS17260 3649065 .. 3649084 -  -7.1  -3.53563   ACAGGCCCGGCGAAA            GCGCGCGC TCATG GC-CGCGC            CGCGGGACGGCTGAG  57 14
CWR61_RS17255 NONE
CWR61_RS17250 3647819 .. 3647862 -  -7.2  -3.04792   TTATCAGGCTGAACA GCACGCGCGGCGCCTGGCC CAGGGCT GGCCGGGCGGGGC-CGGGC CGCGCTCGGGGCTGG  52 281
CWR61_RS17170 NONE
        sdhC NONE
        sdhD NONE
CWR61_RS17155 NONE
CWR61_RS17150 3626642 .. 3626652 -  -6.8  -3.01906   CCAATAAACACTAGA                 CCGT ACG ACGG                 ACCATCAGTTCCTTG  50 10
CWR61_RS17145 NONE
CWR61_RS17140 3624978 .. 3624991 -  -9.5  -6.06723   GCCGGCAAAAAAAAA               CCGCC CGAA GGCGG                TTCTTTCAGCGCACA 100 54
CWR61_RS17135 3623343 .. 3623353 -  -4.6  -2.78384   GCCGCCGCCACCACA                 CGGG AGC CCCA                 TGCTGCAAGACGCGT  44 491
CWR61_RS17110 NONE
CWR61_RS17105 3614335 .. 3614369 - -10.6  -4.28994   TACGATGCAGGAAAA     CCTTCCGCGACACGGG CTT CCCGTTTAGCGGATAG     CAGGGGCAGAAGGCA  86 268
CWR61_RS17100 NONE
        odhB 3610061 .. 3610117 - -12.9  -3.74693   CCGGATTCGACGAAA CCGGCAGGGCCGCC--GGGCC-GGCCGC GATG GCGGCCTGGCCCGTGGCGGCAGCGACAG AAGAAGGCATTCCTC  84 58
        lpdA NONE
        zapE 3607199 .. 3607240 -    -2  -3.14132   GGCTTGCCGGAGGAA GTCGCCGCCA-CGGTAGCC TTCCT GGCGTCCGATGGCGCGGGC TACACCACGGGCGCC  43 89
CWR61_RS17075 3605346 .. 3605389 -  -5.3  -3.86015   GACGTCGTGCAGAAA CTGAAC--CGGACCGTGCAGG AGGT CGTGCACAGCCCGCAGGTCAG CAAGCGCCTGAGCGA  60 179
CWR61_RS17055 NONE
CWR61_RS17050 3601056 .. 3601072 -  -2.9  -4.38712   CTGACTGCGAGAAAA              CACGGGA CTC TCCTATG              CGTTAGCTTCTTCCA  66 104
CWR61_RS17045 NONE
CWR61_RS17040 NONE
CWR61_RS17035 NONE
CWR61_RS17030 3596158 .. 3596177 - -11.4  -3.05463   AGGCTGTGGATCGAA            GGGCACAG TTTA CCGTGCCC             CCGGCGAGCGCATTC  66 39
CWR61_RS17025 3594689 .. 3594721 - -19.2  -2.82516   GCGCTGATCACGACA     CAGGCGCCGC-CCCA TCGT CGGGTGCGGCGCCTG      CGTCCTTGCTCTGCT  93 80
CWR61_RS17015 3590029 .. 3590045 - -15.1  -4.18018   GCCGTCCATGGAAAA              CCCGGCC CCA GGCCGGG              TTTTCCATTTGCGCG  95 45
CWR61_RS17005 NONE
        pgeF NONE
        phaC 3585624 .. 3585639 -    -6  -3.61894   AACGCCCGCCAAGAA              TGCCGG CCCT CCGGCC               CACGCGCGTACTCAG  57 37
        phbB 3584799 .. 3584827 -  -9.6  -3.04263   ATTTTACGTGTAATA       CCGGGTGTCCG CTTCCCCC CGGAC-CCCGG        CCCCCTCCGAATACG  59 44
        phaR 3584123 .. 3584142 - -16.4  -4.72986   GACCCGTACGAAAAA            GGGGCGCC CGCA GGCGCCCC             TTTTTCTCCAGCCAG 100 51
CWR61_RS16980 NONE
CWR61_RS16975 NONE
CWR61_RS16970 NONE
CWR61_RS16965 3580791 .. 3580808 - -12.7  -3.34398   TCGGCGCCCGAAAGA             GGTGGCG GGAT CGCCACC              ATACCGCGCCACGCG  77 49
CWR61_RS16960 3579602 .. 3579642 -  -3.2  -3.89354   CGTCGAAACGAACAA CGGCGTGGTGACACTGACCG GTA CGGTCGGCACCGCCAC-C-G AGGCGGATCAAGCGG  58 256
CWR61_RS16930 NONE
CWR61_RS16925 3570333 .. 3570368 - -23.4  -3.14132   CTGTCCCCGCAGGAA    TCCAGGTGCCTGTCCC CGCC GGGACAGGCACCTGGG     CACCCGGGCCCCTGC 100 42
CWR61_RS16915 NONE
CWR61_RS16910 3566842 .. 3566866 -  -5.5   -2.7728   CGGAAATTGCAACCA          TTTCCGCGCCC CGC GCGCGCGGCAG          GCCTTGGCGATTGCG  46 81
CWR61_RS16905 3566145 .. 3566166 -  -8.6  -3.07113   CATCACGCCACCGAA           CGGCCCGC CGACGC GCTGGCCG            CCTATGCCGGGCAGC  55 173
CWR61_RS16895 3563454 .. 3563473 -  -7.8  -3.62046   CCAGCCGGCCAACAA            CCGCGC GATCATGG GCGCGG             CCCCGCCTTCGCGCA  60 237
CWR61_RS16885 NONE
CWR61_RS16880 NONE
CWR61_RS16875 NONE
CWR61_RS16870 3558558 .. 3558584 - -10.8  -3.19026   CACGCCAATACGGAA         TGCGGCCGGC ATGGCCG GCCCGCCGCA         CGTCACGCCGCCACG  65 28
CWR61_RS16865 3556802 .. 3556823 - -18.7  -3.17075   GCCGCCTGAACGCAA           CGGCCCGCC TTGC GGCGGGCCG            TTTTCCGCAGCTGCG  89 268
CWR61_RS16845 3551950 .. 3551960 -  -2.4  -3.57144   TTGTTCATCTGCAAA                 CTGC CTT GCTG                 TCGTGACCTTGCCGG  50 49
CWR61_RS16840 3550785 .. 3550811 -  -4.5  -3.16676   TGCAGGAAGCCAACA        CGGCGGACAT-GA TCT TCGACGTC-GCCG        AGTCGATCAGGATCA  47 260
CWR61_RS16820 3546415 .. 3546425 -  -8.2  -3.15579   CGAACGCGCCACGAA                 CGCG GTG CGCG                 CCATGTCCTGGGAAA  56 385
CWR61_RS16780 3538946 .. 3538956 -  -4.6  -4.06384   CTGGAACACTACAAA                 CGCC AAC GACG                 AGCGTTTCGCTCTCG  63 391
        gyrA NONE
        serC NONE
        pheA 3529969 .. 3529988 -  -4.2  -4.84761   ATACCTGCAGAAAAA            CGATACGGC GGC GCCGGA-CG            GACATACGCTCCGTC  79 79
CWR61_RS16735 NONE
        aroA NONE
CWR61_RS16725 3526898 .. 3526924 -  -8.6  -3.69216   TGGCCAGTCAAAACA         CACCGCAACGGA TTG CCCGCAGCAGTG         GAGTGGTAAAACCTG  67 147
CWR61_RS16720 NONE
CWR61_RS16715 3524709 .. 3524738 - -16.6  -5.00616   GTCGGCCCGAAAAAA       CAAAGCCCCTTG AACAAG CAAGGGGCTTTG        CCGGTACAACACCAA 100 67
CWR61_RS16710 3524307 .. 3524321 -  -5.6  -3.71848   TCTCGGTAGGAAGAA               GGGACA CGG CGCCCC               GGGTTACAGCGGCGA  60 29
        lapB NONE
       rfaE1 NONE
        rfaD 3521108 .. 3521130 -  -3.3  -2.64144   GGTGCACGCAAACAT          CCACCCGGGC AATT ACCCGGG-GC           CAATCCGCTACTTCA  39 33
CWR61_RS16690 3520453 .. 3520475 - -17.7  -3.78934   TGCCGCCGATAATAA           CCGCCCCGG ATCGG CCGGGGCGG           TTTAGCCGCGCTGGC  93 69
        cysM 3519145 .. 3519194 - -11.2  -3.01712   CTTCCTGGTCGAACA TGGCTGGCAGCGCGGCCTGC-CG GTGTT CGCGCCGGTCGCGTTGCCGGCCG ATCCGGCGCCGCTGG  62 358
CWR61_RS16675 3517347 .. 3517362 -  -7.5  -3.08006   AAATAACAATAATTA              CCCGG CGAAAC CCGGG               ACCGCATTGCACAAT  55 53
CWR61_RS16670 NONE
CWR61_RS16665 3515599 .. 3515618 - -16.4  -6.34424   GGGCCAAAAAAAAAA            CCGCGGGC GTCG GCCCGCGG             CTTTCCTGTGCGCGG 100 47
CWR61_RS16660 NONE
CWR61_RS16655 3512796 .. 3512811 - -10.4  -5.75342   GCGGCGCAAAAAAAA              CGCTCC TTGC GGAGCG               TTCCTGCCGAAGCGG 100 46
CWR61_RS16650 NONE
        cysT NONE
        cysW NONE
        cysA NONE
CWR61_RS16630 NONE
        cysD NONE
CWR61_RS16620 3505680 .. 3505690 -  -2.4  -4.47707   TTGGATTAAAAACAA                 CAGC CTG GCGG                 AAGGCCTTGCGGCCA  67 42
CWR61_RS16615 3504170 .. 3504190 -  -3.8  -2.72463   ATGCATTTCCAACCA            CTGCCGCG ACGGG CGCGGCCC            CCTTACCACTGGCAA  42 78
CWR61_RS16610 3503644 .. 3503691 -  -2.6  -2.53903   TGCGGGAAAAAGTAG GCA-TAGGCCGG-CTGGCTGGC TGCCTG GCCATCCTGGCCGGCGTGGTGC TGCTGGGCTCGAGCT  38 50
CWR61_RS16600 3502058 .. 3502075 - -12.7  -4.82901   TTGTCGCGATAAAAA             GGCACCC TTGC GGGTGCC              TTTTTATCGCGGAAT 100 98
CWR61_RS16590 3500814 .. 3500829 - -11.8  -5.26875   CCGGGAATGAAAAAA              GCGCGC CACG GCGCGC               CGTACTGTTCGGGAT 100 63
CWR61_RS16585 3499392 .. 3499403 -  -7.2   -4.2558   CATCCTGGACGAAAA                CGCG GCCG CGCG                 CCCCTACTGACCCCC  72 336
CWR61_RS16570 NONE
CWR61_RS16565 3495536 .. 3495559 -  -2.3  -4.60924   GAAATCCTCGAAAAA          CTGGGCATT CCCGAC AAGGCCCTG           GTGCTGTCGGCGCGC  71 405
CWR61_RS16555 3493865 .. 3493900 -  -5.2  -4.32951   ACTGGAATGAAGAAA    CCGGCGGCGCGGTCAGG CCG CCTTGCGGCGC-GCCTG    CTTGTCGGCGTGGGC  68 2
CWR61_RS16550 NONE
        paaI NONE
        paaJ NONE
        paaK NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF 3486724 .. 3486755 - -22.4  -3.55444   GGTCTATCCCTGAAA      CGGCAACGCCGGCCC CAG GGGCCGGCGTTGC-G      CCATGCGAATCCGCT 100 42
CWR61_RS16475 NONE
CWR61_RS16470 NONE
CWR61_RS16465 3476888 .. 3476899 -  -4.4  -3.53811   CGGACTGGTCGCAAA                TCCA GCCC TGGA                 CAAGCAGTTTTCACC  51 64
CWR61_RS16460 NONE
        potA NONE
CWR61_RS16450 NONE
CWR61_RS16445 NONE
CWR61_RS16440 NONE
CWR61_RS16435 3471449 .. 3471492 -  -4.6  -3.28712   CCTGCTGGCCGAGAA GATCACCGATGCGGCCGGCA ACATGG CGCCGACCG--TCAGCGACC TGGTCAAGCGCGGCG  49 308
        rmuC 3469515 .. 3469531 -  -9.3  -3.78934   TTGGCGGCATAAGAA              GTGGGCG GAC CGCCCGC              CCCGCCGGAGGCTCG  71 60
CWR61_RS16420 3467838 .. 3467852 -    -7  -2.96984   GAAATTTAGCAGATA               CCGGGC CAG GCGCGG               GCCAGAATCGGGGCC  50 1
        rpiA 3467049 .. 3467084 - -13.3  -2.54192   GACAGGATTATGAAT   CCCCCCCGGGAGGCCGG CAAG CCGGCC-CC-GGGAAGG    CGCGCCGGGTCAGCC  67 35
        phoU 3466087 .. 3466133 - -12.2  -2.70932   GCCGCGGGGCAATCA TTGCGGCTGGC-CGGCCGGGCG CGCGC CGCCGGGCCGGGCCGGCC-CGA CCCGCGCCTGGGCTG  65 55
        hrpA 3458390 .. 3458430 - -11.8  -3.57263   ACTGGCACCCGCAAA CTCTCGGGGTGCCTGTCCC CGCG GGGACAGGCA-CCTGTGGG  ACAGCCCCCCCTACC  77 36
CWR61_RS16380 NONE
CWR61_RS16375 NONE
CWR61_RS16370 NONE
CWR61_RS16365 NONE
CWR61_RS16360 3449757 .. 3449788 - -12.9  -3.04144   TGTTCATCTGGAACA      GTCCCGCCGCGCC AGCCCG GGCGCGGCGCGAA       TACGACGCGCCCTAT  66 250
CWR61_RS16350 NONE
CWR61_RS16345 3445761 .. 3445789 -  -2.3  -3.27743   CATCATCAAGGAATA       CGC-CGGCCTGT TCGTCT ACTGGCTGCGCG        GCTGGGTGTAACGCC  44 438
        msbA 3442041 .. 3442057 -  -2.1  -3.53012   CTGCCGCCGCCGAAA              CCATGGC GCC GCAGTGG              GCGCAGCAGGTATTG  47 148
CWR61_RS16315 NONE
CWR61_RS16310 3438946 .. 3438968 -  -6.2  -3.03124   GGCGATGGCGGAACA           CGTCAGCGTC AAT GACACCGATG           CCTATGTCGCGGCCG  48 295
CWR61_RS16300 3436980 .. 3436992 -  -9.1  -4.44667   TCCTCGAAGAAGAAA                GCCAG CAT CTGGC                TATGCTGGGCGACTT  82 167
CWR61_RS16290 3433239 .. 3433260 -  -2.9  -2.91912   CGACTGAGCTACAGA           CCCGCGAAA CCTC TCTCTCGGA            TCAGCAGCCACCGAT  42 102
CWR61_RS16285 NONE
CWR61_RS16280 3432976 .. 3433014 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCCTGG  64 80
CWR61_RS16275 3429743 .. 3429753 -  -6.8  -3.65314   TTGAATCTGGAAGAA                 GCAC AGC GTGC                 GCCCGGCAGTCGGTT  59 127
         rrf 3429534 .. 3429568 - -19.5  -4.56597   GCGTCCCCCCAAAAA    CAAAACCCCGCGAGCC GTGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CWR61_RS16230 3421679 .. 3421707 -  -8.2  -2.61582   CAGTGTATGCACAAC       TTG-CGGCGGC TGTCGCGC GCCGCCGGCAA        TTCAGCGCCGCCGCG  53 27
CWR61_RS16225 3419946 .. 3419979 -  -4.3   -3.5393   AGCACGCCGCCGAAA     TGGGCGCGCTGCTGC ACCA GGAGCTGCAGGCCCT      GGCCAGCCATCCGCT  51 340
CWR61_RS16215 3417391 .. 3417449 - -14.3   -3.6106   TGGAATATGTCGAAA GCGGCCGGCGCGAAGGCGCGCGGCTGC GCATG GGAGGCGAACGCGTACGCGCCGACAGC GGCGGCTACTACATC  78 396
CWR61_RS16160 3404216 .. 3404241 - -15.4  -3.67296   CATTATCGATCCAAA         CGGCGCGCGC GGCCAA GCGCGCGCCA          GGCCGGCATCAGGCG  90 34
CWR61_RS16155 3403014 .. 3403052 -  -8.7  -3.03159   CCAAGTCCGCCAAGA  GCGCGGGCGGCGGCGCGGC CGA GGCG-GCGGCCGGC-GCGC  ATTGAGCGCCAGGCC  56 51
CWR61_RS16125 NONE
CWR61_RS16120 3395198 .. 3395219 - -18.7  -3.59979   GTCCGCCAGCGCAAA           CGCGCCCCG TACA CGGGGCGCG            TTCTACATGGGCCGA  93 54
CWR61_RS16110 NONE
CWR61_RS16105 3391878 .. 3391912 - -10.7  -2.73681   CAGCCACCTCAAGCA    CGCCCTG-CAGGCC-GC GAC GCTGGCCGAACAGGGCG    GCGCCGGCCCGCACC  59 488
CWR61_RS16090 NONE
CWR61_RS16085 NONE
CWR61_RS16080 NONE
CWR61_RS16075 3385954 .. 3385985 -   -10  -4.09243   GATACTTCCGGAAAA      TGGGCGGGCCGCCGC CGT GCGG-AGCCCGCCGC      CGATGCGGGATTACT  79 36
CWR61_RS16070 3384713 .. 3384744 - -13.6  -3.14211   AGCGCCGCGCATCAA      CGCGCCTGGCGC-CG CGC CGAGCGCCTGGCCCG      CCAGTTGGAGCCGCT  72 86
CWR61_RS16055 3380672 .. 3380686 -  -2.7  -3.70902   CCGCCTACATGGAAA               CGGCC ATCGA GGACG               ACGAGATCGCCGAGC  53 239
CWR61_RS16035 NONE
CWR61_RS16030 NONE
CWR61_RS16025 NONE
CWR61_RS16020 3373023 .. 3373039 -  -2.2  -3.13522   ATCGCGGGATCAATA              GGAGAA TTCAT TTCGCC              TTACCTGTCACGGGC  42 176
CWR61_RS16015 3372046 .. 3372059 -  -3.1  -3.53012   CTCGCCGGGCGCAAA               CCATGC AAT GCA-GG               TCCCGGCAAGGGATA  49 202
CWR61_RS16010 3371618 .. 3371632 -  -7.1  -2.70932   TGGGTCTGCCAACCA               GGCTC TGCCT GAGCC               TGTTACTCGGCCGCG  48 28
        priB NONE
        rpsR NONE
CWR61_RS15995 3370390 .. 3370406 - -10.8  -5.75342   GCTCTCGAAAAAAAA              GCCGGC ACCAG GCCGGC              TTTTTTCAGGCATGC 100 48
CWR61_RS15990 NONE
CWR61_RS15985 3367939 .. 3367972 -  -2.9  -4.56597   CTGCGGCTCGAAAAA     GAGCCTGGCCAGCGG TATC CCGATGGCCCAGGTG      ATCTTCGCCGGACAG  71 159
CWR61_RS15955 3361885 .. 3361899 -  -2.1  -3.07935   ATCGGATTCATTTAA               GCAAA CCGTC CTTGC               GGAACATATCCTTGA  42 3
CWR61_RS15950 NONE
CWR61_RS15945 3359110 .. 3359147 - -24.9  -4.25104   GGGCGGCCATGAAAA   GACAACCCCCGGGCGCC TCGC GGCGGCCGGGGGTTGCC    CTTGCAAACAGCCTG 100 51
CWR61_RS15940 3358652 .. 3358676 - -20.7   -4.4891   GCCAGCATGAGAAAA          GCCCGCCGGCA TCG CGCCGGCGGGC          TTTTTTCGCGGTCCG 100 88
CWR61_RS15925 3353692 .. 3353713 -  -4.3  -3.31817   AATCACCAAACTCAA           GCGCAAGGC GGAA GCCCTGCAT            ACGCGGCGCCGCAAG  47 412
CWR61_RS15915 3352683 .. 3352694 -  -3.6  -3.48395   ATTCCGTCTAGAGAA                CGCG ATGA CGCA                 GGGCGGGCAGGCTGG  49 6
        tldD 3351147 .. 3351164 - -10.5   -5.9873   CTAGCACAAAAAAAA             CCGCGCG TCAC CACGCGG              TCTTTCCACGCCGGG 100 65
        aroG 3349415 .. 3349438 -    -8  -3.21099   CCGGTGTACCAGGAA          GTCGCCGCGC GCGC GCACGACGCC           TACACTGGGCTGCAA  53 462
CWR61_RS15895 3335731 .. 3335753 - -17.8  -4.98531   GGCGGAAATGAAAAA           GCCCACGCAA CGC TTGCGTGGGC           TGGCGGGACGCCGCC 100 57
CWR61_RS15890 3334136 .. 3334156 -  -3.2  -3.81951   TCCGACAGGACGAAA            TCCATGGC CGCAC GCCCTAGA            AGCGCGCCAGATCGG  56 21
        glcE NONE
CWR61_RS15880 3331363 .. 3331398 -  -8.2  -3.68619   TGGAATTCATCGAAA    CGCGCGTCAAGCCC TGGGTGGC GAGCGCGACGCGCA     TCGATGCCGGCCGCC  67 408
CWR61_RS15865 3327444 .. 3327487 - -21.6  -2.76815   AGGCCGTGGAATAAG GCGCGGCGG-CGGTGCGGCGC ATG GCGCCGCGCCGCCCGCCTAGC GGCGCGCGCGCAATT 100 21
        gcvA NONE
        mnmA 3320102 .. 3320134 - -11.1  -3.73775   CCCAGGTTTATGAAA      CCGCTGTGGCAGCCG CGT CCGCGGCCACCGCGA      GACCGGCGCGCCTCC  77 63
CWR61_RS15825 3319178 .. 3319197 -   -15   -4.8622   GCGCGCAATGAAAAA            GGCGGCTC GCAC GAGCCGCC             TTTTTCATTGCGAAG 100 81
CWR61_RS15815 NONE
CWR61_RS15810 3316439 .. 3316454 - -10.4  -5.88471   CAGGACGAAAAAAAA              CCGGTC GCGC GACCGG               TTTCGTGTTTGCGGG 100 57
CWR61_RS15795 NONE
CWR61_RS15790 3312872 .. 3312919 -  -5.3  -3.48276   GGTTGGTGGACATAA GGCCATTGTCGCGCCCGCCCG GCGGCG CGGGCAAGCCCGATCAGGGCT GCGCGGCGCCGCCTC  53 18
CWR61_RS15785 3312033 .. 3312047 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGATA  61 162
CWR61_RS15765 3308280 .. 3308293 -  -2.3  -4.19817   TCCATTGATGGAAAA               CCAGG AAAT CATGG                TGGCTTTCGCACAAG  61 292
CWR61_RS15755 NONE
CWR61_RS15750 NONE
CWR61_RS15745 3307066 .. 3307113 -   -23  -2.72471   GCGCCACCAGAGAAT TTGCAAAACAAAAGGCCCGCAA GCGA TTGCGGGCCTTTTGTTTTGCTC CGCAATTACCGGATC 100 90
CWR61_RS15725 NONE
CWR61_RS15720 3302160 .. 3302177 - -14.1  -2.64616   CCGCCATGGATATCA             GCGCGGC GCTG GCCGCGC              TGCGCCCCGCCGGCG  66 67
CWR61_RS15700 3297540 .. 3297562 - -12.7  -5.02074   TGATGCGCCAAAAAA          CCCCGGTCGC GCAA GCG-CCGGGG           TTTTTTCTTTGCGGC 100 53
CWR61_RS15690 3296587 .. 3296615 -   -11  -3.72576   CCTGCCTTCATGAAA       GCCCCGGTCGATC GCAA GATTG-CCGGGGC        TTTCTCTTTGCGGCG  77 47
         rnr 3293570 .. 3293590 - -15.4  -3.72363   GATTGAAACGTGAAA            CGCCGCCG GAAAG CGGCGGCG            GGCCGGGCCCTGCGG  90 98
        rlmB 3292767 .. 3292789 - -12.6  -3.03124   TCGGACGTTCGAAGA           GGCGCGCGGC GCG ACGGCGCGCC           GCTGCAAGAGTTTAC  68 37
CWR61_RS15670 3291507 .. 3291520 -  -2.3  -3.18264   GCGGGCAGGCATCAA               GGTTG CAGA CAGCC                GCGCAATGCCTGATC  44 8
CWR61_RS15665 3290590 .. 3290647 -  -9.1  -3.58533   GCACAACTTTTTAAA GGCTGCGTCGCAGGTACTTCC-AGGC ACATGAA GCCAGGGAAGGAGCTGCGACGCAGAG CAGTATTAGGCCTTG  68 160
CWR61_RS15660 3290159 .. 3290171 -  -9.1  -3.64703   GTTTTGTTAGGCAAA                TCGGC AGC GCCGA                TTTGCCTTTGCGTCC  68 42
CWR61_RS15655 3289919 .. 3289951 -  -6.8   -5.4505   GCGCGCAACAAAAAA     CCCCGCGCGGTGCGC CGAT GCGC-CTTCGCCGGG      GTTATTGCGCCTGCT  95 78
CWR61_RS15645 NONE
CWR61_RS15640 NONE
CWR61_RS15635 NONE
CWR61_RS15630 NONE
CWR61_RS15625 NONE
CWR61_RS15620 3283280 .. 3283300 - -10.4  -2.71924   CATGCTGCGCGAAAC            CGCGCAAC GCTGG GTCGCGCG            CGCCATCACCGGCGA  56 387
CWR61_RS15600 3278972 .. 3278992 -  -3.2  -2.62184   GCGTGCTGCACAGCA            GCAGCC TGGTGGTGC GGCCGC            TGGGCAGCCTTGCCC  40 467
CWR61_RS15575 NONE
CWR61_RS15570 NONE
CWR61_RS15565 NONE
CWR61_RS15560 NONE
CWR61_RS15555 3269415 .. 3269435 - -16.1  -3.16191   CCAGAGGTGGATGAA            GGCCGGCGC GGG GCGCCAGCC            GCGGTTGCCGGATCA  82 38
        garL 3268552 .. 3268569 - -11.3   -4.0616   TACGGCAAGCAGAAA             GGATGCC CGCG GGCATCC              TTTTTGTTTTGGCGC  81 77
CWR61_RS15495 NONE
CWR61_RS15490 3258195 .. 3258215 - -19.7  -4.05788   TGGCTGCAAAGCAAA            CGGCCCGGC AAG GCCGGGCCG            TCTTGACCGCGAGTA 100 47
CWR61_RS15485 3256673 .. 3256718 -    -9  -3.44146   GTGCGTCATAAGCAA GCCGCGTCCCGGCG-CAG-ATGT CCA ACAGACGGACGCCAGG-CGCGGC CCGTCTACTCCATGG  62 30
        pcaF 3255358 .. 3255373 - -10.4  -5.15969   CCGGAACGCAAAAAA              GGAGCC TTAC GGCTCC               TTTTTGCCATGCCCG 100 54
        clpS NONE
CWR61_RS15460 NONE
        pbpC NONE
        clpA 3244071 .. 3244084 -  -4.5  -2.94747   GCAGGCGATCAGAGA               GCGTG GATC CACAC                GGTCAGTCGATCAAT  44 28
CWR61_RS15445 NONE
CWR61_RS15440 NONE
CWR61_RS15435 3240264 .. 3240290 -  -5.7  -2.98823   GTGCTTCCAGAGATA         CGGTGGCCGGC GTGAT GCCTGCCATCA         GGACTGCGATCCAGC  48 133
CWR61_RS15430 3236387 .. 3236404 -  -6.2  -3.51365   CGATATTGGAGATAA             CCCGCA ACCAGA CGCGGG              TTACCCCCAGGCACT  55 41
CWR61_RS15425 3234926 .. 3234946 - -10.3  -3.61178   CGCAGCGATCGGAAA            CGCGACGCC ACT GGCAACGCG            CGGCGCCCGGCGGCG  71 100
CWR61_RS15420 NONE
CWR61_RS15415 NONE
CWR61_RS15410 NONE
CWR61_RS15405 3231308 .. 3231327 -  -6.3  -3.40403   GTTCCGCGAGCAGAA            CCGGCGC CCGTGC GCGCAGG             CATGCTCAGGCTTCG  53 31
CWR61_RS15395 3229238 .. 3229259 - -11.5  -2.62184   CTCCCCGCGACACGA           CCGGAGTCG GCAA CGGCTCCGG            TTTTTTCCTGCCCGG  62 52
CWR61_RS15380 3226603 .. 3226652 -  -4.8  -3.53012   GCGGCGTGCCGGAAA CGTCACGCCGCGGGAGC-GGC CGGAGGGTT GCCTACGCCTGCGGCTTGCCG GCTTCGAGCGCGGCC  53 7
CWR61_RS15375 NONE
CWR61_RS15370 3224508 .. 3224526 -  -2.4   -2.8655   GCGAGGCATAGTAGA             TCTCCCTT ATC AAGCGAAA             GGCATCATCGCTTTC  40 16
CWR61_RS15365 3224087 .. 3224117 - -16.2  -4.09685   TTTGAGCCTTCAAAA       CGCAAACGGGGCCA TTA CAGCCCCGTTTGCA       GCGATCCGCGATGTA  95 50
CWR61_RS15360 NONE
CWR61_RS15355 NONE
CWR61_RS15350 3220263 .. 3220276 -  -2.3  -3.88137   ACAATTGCCGACAAA               GCGTA TCAC TCCGC                AGAGCCGGGCTCCGG  55 17
CWR61_RS15345 3219737 .. 3219766 - -14.4  -4.54727   GGCTTCAAACGAAAA       CGCCGCCT-GTTC GCGAA GAACCAGGCGGCG       TCGCTGTCTGCCGTA 100 58
CWR61_RS15340 3219492 .. 3219550 - -16.1  -4.59511   AACATGGGGCAAAAA CG-CCAGAAAGGACAAGGGCCCACAGTC TTGC GACTGTAGGCCCTTGATATTGCTGGTCG GGACGGCGGGATTCG 100 20
CWR61_RS15330 3217697 .. 3217709 -  -2.7  -4.56607   TGAGGAATCAGAAAA                CCTAT TAC ATAAG                GGCTGTAATTTTCAG  67 293
CWR61_RS15325 3216456 .. 3216473 -  -6.2  -4.60041   AGTCAGGTTCAAAAA             CGGCGC CTAGAT GCGCCA              GAAGGTCTTGGGCGA  79 505
CWR61_RS15310 3215314 .. 3215334 -  -3.2  -3.98683   ACGAGATGAATGAAA            GGCCATGG TTTTT CCATAGTC            CGGGCACGTCGAAGG  58 189
CWR61_RS15305 3214566 .. 3214606 -  -9.3  -2.52464   CTTTTTTTCAACGCA CTTGTATCTACCTACAGCCC CCAG GGGCTGTAGGTAGAT-C--G CTTTTTTGTTCCTGC  55 40
CWR61_RS15295 3212055 .. 3212106 - -14.7  -3.34398   GTTCTGCTTGAAATA GTTGCCCAT-CC-TTGCTATGCCTC AGCA GAGGCATAGCATCGGTATGTGCAAC ACGCGCTCAAGCTGG  84 32
CWR61_RS15285 3209501 .. 3209543 -  -7.5  -3.53012   CCCCCGGGGCGCAAA GCCGGCCG-CCCGCGCGCCT GTCC ACGCGCGCGGGTCGAAGCGC CAGACCGGGCTGCCC  60 60
         bla 3206170 .. 3206225 - -18.8  -2.97707   CGAGATCAAGAACCA GGCGCGCGAGCGCGCGCGCCAGTACT GCGA AGCGCAGGGGCGCAAGTTCGCGCGCC CGGAAATCACGTCCA  85 139
CWR61_RS15240 3203936 .. 3203972 -  -2.8  -3.54459   TGAAGTTCGCGCAAA    GCCGCCCCAACCCG CCACTGCCC CAGGCCGCGGCCGC    CGACTACATGGGCAC  50 492
CWR61_RS15225 3202244 .. 3202267 - -14.6  -5.26875   TGCGCAAGCAAAAAA          GGCCTGGCGA TGTG TCGCCAAGCC           TTTTGATCTGGTTGC 100 34
CWR61_RS15220 3201416 .. 3201461 -  -8.3  -3.05844   TCGTGGACTTCAAGA CCCGCCGCATTCAGCCGCGCA AATACG TGCGCGGCCGGAT-CG-CGCG CATCCAGTTCTACAT  55 360
CWR61_RS15210 3200543 .. 3200573 - -10.4   -4.8622   GCGCCCAATGAAAAA      GCCGCCTTGGCGC CCTATC GCGGCA-GGCGGC       TGCGCATGGCGCGGC 100 59
CWR61_RS15205 NONE
CWR61_RS15200 3199555 .. 3199571 -  -7.3  -4.37506   AGGAGGAAAGACAAA              TATACGC AAT GCGCATA              TTATTCGACCAAAAA  78 89
CWR61_RS15195 3198203 .. 3198226 - -13.8  -3.57144   CGTCTGACGCGGAAA          TGCGTGGCGC CGAC GCGCCACGCG           GCACGGCCTAGTCCA  84 33
CWR61_RS15185 3196866 .. 3196881 - -11.8  -3.53224   GACCGGCCGGCGAAA              GCCCCC CCCT GGGGGC               CGCCACAAGCCCCGG  75 67
CWR61_RS15170 NONE
CWR61_RS15165 NONE
CWR61_RS15160 NONE
CWR61_RS15155 NONE
CWR61_RS15150 3190281 .. 3190294 -  -2.3  -2.88544   GGTCATTGCGACAGA               CATGG ATTC CCCTG                TTTCTTCCCCTGCGC  40 43
CWR61_RS15145 NONE
CWR61_RS15140 NONE
CWR61_RS15135 3186518 .. 3186532 - -12.8  -5.15969   CCCCAAGGCAAAAAA               GCCCCC TCG GGGGGC               AGCAAGCCCGCATAG 100 160
        recA NONE
        recX 3179977 .. 3179994 -  -9.1  -3.15544   GCTCAGCGGCATCAA             GGC-GGCC AAG GGCCTGCC             CGCCTGATCGAACGC  60 106
CWR61_RS15100 3176529 .. 3176587 - -10.5  -2.91395   ACGCGCCGCACAAAT TTCAAGCGCGTCGCCCGGGGGGCTGCCCCTC CGG GAGGG-CAGCCCCCCGGGCG--GCACC-G-- CAAGGGGACGGATAC  60 54
CWR61_RS15095 NONE
CWR61_RS15090 NONE
        sucD 3173682 .. 3173701 - -16.4  -5.75342   CGGCGGCAAAAAAAA            CGGCCCGC GATC GCGGGCCG             TCCTGGGACAGGCGG 100 57
CWR61_RS15075 3172375 .. 3172417 - -23.5  -5.07652   GCGGCCAAAAGAAAA CGGGCTGGTCA-GCCCCGCC TGAT GGCGGGGCGCGAACAGCCCG CTATTGTAGTTCAGC 100 47
CWR61_RS15070 3171461 .. 3171494 -  -5.9  -4.03413   AGGGCGTCAGAGAAA     GCTGGAGACGATGAC CGAT GCCACCACCCCCAGG      ATGGCCAGCACGAAC  64 92
CWR61_RS15065 NONE
CWR61_RS15060 NONE
CWR61_RS15055 NONE
CWR61_RS15050 NONE
CWR61_RS15045 3166225 .. 3166266 - -23.8  -4.21194   GCGCATGACGCAAAA CGGCGCGGATGCGAGCGGC TGCCT GCCG-TCGCTTCCGCGCCG CCGGCCGCCCCAGGC 100 53
CWR61_RS15040 3165423 .. 3165434 -  -5.8  -2.52464   GCTCTGTTCAAGCGA                TGCG TACG CGCA                 GCTCGCCCAGGCCCT  45 6
CWR61_RS15035 3165212 .. 3165232 - -15.4  -5.75342   CGGCGGCAAAAAAAA            GCCCCCGG GGTGA CCGGGGGC            TTGCATCATGCCGGC 100 50
CWR61_RS15030 NONE
CWR61_RS15025 3163146 .. 3163179 -  -2.1  -2.91276   GCCCGCGGGAGAAAG     CCGCGCCCCTCATGG CTGG CTTTCCGGGCCGCGG      ACCGTACGCCGCGCC  40 1
CWR61_RS15020 NONE
CWR61_RS15015 NONE
        cpaB 3161038 .. 3161052 -  -3.5  -3.30124   CGGTAGCCGGGACAA               CACGC TCATG GCATG               GCCGCTTCGGTATCG  47 16
CWR61_RS15005 NONE
CWR61_RS15000 NONE
CWR61_RS14995 3157178 .. 3157191 -  -4.5  -3.53012   GCCCGGCCCCTCAAA               CATCG ATGG CGACG                ATGCGGCGGATCAGC  51 7
CWR61_RS14990 NONE
CWR61_RS14985 3155462 .. 3155495 -  -3.7  -2.70932   GTCGGCCTGCAAGCA     CGTCGAGGCCGGC-CG CGT CATGCTGCCCTCGATG     TGGCTGCAGCCGCTC  42 410
        dusA 3152566 .. 3152587 -  -7.9  -3.96337   GCAAAAAGTAGCAAA           GCGGGCGCGC CAA GCGC-CCCGG           GAGGAACATCATGTT  70 505
CWR61_RS14955 NONE
CWR61_RS14950 3149388 .. 3149398 -  -3.2  -3.83758   AATCAAGACGAACAA                 CTGA CTT CCAG                 CCCCGCTGCCCAGTC  56 2
CWR61_RS14945 3148355 .. 3148370 -    -6  -3.57144   CCGCCCACCGCGAAA              CGCCCG GCAG CGGGCT               GGGACTGCACCTGGC  57 161
CWR61_RS14935 3144017 .. 3144036 -   -10  -4.07568   GGCTTCGCGCGAAAA            CGGGGTTA CGGT CAACCCCG             ATTATGACACTGCCG  79 27
CWR61_RS14930 NONE
CWR61_RS14925 3142018 .. 3142066 -  -8.6  -2.62184   GGCCGCTGGACATCA CGATCGCGCGC-CTGGCCGCGCC CGTC AGCCCGGCCTGAACGCGCGGCCT ATTTGGCGGCCTGGC  53 24
        apbC NONE
CWR61_RS14900 NONE
CWR61_RS14895 NONE
CWR61_RS14890 NONE
CWR61_RS14885 3134350 .. 3134387 -  -3.3  -3.36273   CGGCTTGAATACGAA   CCGATTTCATCTGGGGCC CGC GGCCCCTGG-AACATCAG   GCCATCATGTCGAAA  47 22
CWR61_RS14880 3134008 .. 3134022 -  -5.6  -3.13403   TCTTGGTCAGCAACA               TGCCGG GCT CCGGTA               TCAAACGAGGGTTGT  49 26
CWR61_RS14875 NONE
CWR61_RS14870 NONE
CWR61_RS14865 NONE
CWR61_RS14860 NONE
CWR61_RS14855 3128544 .. 3128593 -  -5.5  -3.61398   TTTCGCGCGCAAGAA GGTCCGGCGCGCG-CGCCCCGCC TGAGAT AGCGG-GCGTCGCGCGGCTTGCC GCCCGGACTTACTGG  57 34
CWR61_RS14845 3126550 .. 3126577 -    -4  -2.74523   GCAGGTCGAACAGCA        CCGTCATGCCACG CTC CGCG-CGTGCCGG        CCATACAGGCCGGCC  42 1
CWR61_RS14840 NONE
CWR61_RS14835 3124781 .. 3124794 -  -9.5  -2.51547   TCTTGAGAGGAACAT               CCGGC ATGC GCCGG                GCATACGTCGAAGCG  55 268
        leuC NONE
        leuD 3122635 .. 3122682 - -15.4  -5.09426   TGTAAGCGGAAAAAA GGC-AAGGGCCCGCCGTGCGCGC TCG GCGCGGACGGCGGGCCGGCAGGC AACGCGTCAGGCGAC 100 32
        leuB 3121457 .. 3121497 - -17.1  -3.97602   GAATATAGGGACAAA  TTGTGCGAAAAAGCCGCAA AAA TCACGACCTTTTCGCACAA  TGGGCACGCCCGGCA  95 61
         asd 3120166 .. 3120183 - -14.1  -3.35679   GCGCGCCAGCGACAA             GGGCGCC CGCG GGCGCCC              TTGTGTCCTGCCATG  80 58
CWR61_RS14810 NONE
        truA 3117364 .. 3117376 -  -4.7  -3.61398   CTGGGTGTGGAAGAA                TGCGC TGA GCGCG                GACCGTTTGCGTAAA  55 130
CWR61_RS14800 3116237 .. 3116253 -  -6.5  -3.53012   CGCGCGGCGTCGAAA              CGGGG TTATTTG CCCCG              CGCCACCGTCGCCAT  57 14
CWR61_RS14795 NONE
CWR61_RS14790 NONE
CWR61_RS14785 NONE
CWR61_RS14780 3112895 .. 3112919 - -20.1  -5.54907   CGGAGAAAACAAAAA          GCCGCCAGATC AAG GATCTGGCGGC          TTTTTTTGCCATGCC 100 58
CWR61_RS14750 3106649 .. 3106665 -  -2.9  -3.89435   TTCAAACAATGCAAA              TTTGCCC GAT AGGCACA              GGCGCGGCCAGACTG  56 46
CWR61_RS14745 3105836 .. 3105884 - -15.9  -3.08679   CCTGCCCATGTAAGA TGCG-GCGGCGCCGAGGCCGCC GCCCTT GCCGGCCTCAGCGCTGCGCGCT GGGCGTGCCCACCAG  82 11
        hemN 3103805 .. 3103855 -    -9  -3.57144   GGCCCGACCCCGAAA CGCTGGCGCGCCTGGAGGCCG-TGC ACCG GCAGCTGCC-C-AGGCGCGGCAGCC AGCTGTGGAGCCAGG  63 147
        thrS NONE
CWR61_RS14715 3099860 .. 3099895 - -21.8  -3.05463   ACGGGCCGCACGCAA    GCCGGCCCGGCCGCCC TTGC GGGCAACCGGGCCGGG     GATGGGGTCAGCCTG 100 33
CWR61_RS14710 NONE
CWR61_RS14705 NONE
CWR61_RS14700 3097966 .. 3097992 -  -7.2  -2.62735   AGAGCGCGTAGACGA         TGCAGCCCGC GCCGATG GCAGGCTGCC         GGAACCTGGGGTTTT  47 42
CWR61_RS14680 NONE
CWR61_RS14675 3092996 .. 3093016 - -14.7  -4.91511   ATTTGACGACAAAAA            GGGCAGACC CGA GGCCTGCCC            GCTTTGCCGCGCCCA 100 71
        ehuB 3091939 .. 3091978 -  -3.5  -3.14344   CAGGCCGTCCAGCAA GGGCGGCAGC-AGGGACCA GGTG TCGTCCATCGC-GCCCCCC  GCTTACTGGGCGGCG  43 28
        ehuC NONE
        ehuD NONE
        ehuA 3089667 .. 3089680 -  -8.1  -3.28712   GGGCCTGGGCCACAA               GCACG GCAT CGTGC                TGGGCAACCTGGTCG  55 237
CWR61_RS14635 3086695 .. 3086709 -  -8.5  -4.41047   ACGTCTGAAGGAAAA               CGGCG TCATC CGCCG               CATCGTCGCCGTGCT  82 344
CWR61_RS14625 3085124 .. 3085139 -  -8.2  -4.68705   AGAAGCTGAAGAAAA              CCACCG AAGG CGGCGG               CGCGCCGGCGCTCGA  87 343
CWR61_RS14600 3079066 .. 3079080 - -12.8   -3.6968   TGACAATTCCAAGAA               GGGCGC GAG GCGCCC               TGGTATTACGGAAGG  84 49
CWR61_RS14595 3077192 .. 3077205 -  -2.3  -3.86524   ACATTTTGCTACAAA               CAGCC GGCT GCCTG                TATGCTGATACTCCG  55 435
CWR61_RS14585 NONE
CWR61_RS14580 3073420 .. 3073478 - -10.3  -3.06501   GATACCGCTATTGAA TGGCCC-AGCC--GCGTTCTGCGCCCCC GCCTGA GCGGGCGCAGGACGCGAGGCTCAGGCCG TGATGATGTCCAGCT  63 18
CWR61_RS14545 3064038 .. 3064066 - -10.9  -2.52464   CCGCCCCGCAACTGA        GCATCGGCCGG CCCATCC CCGGCCGGCGC        ACGCGTGCGCAGTCG  61 257
CWR61_RS14535 3062035 .. 3062058 - -10.9   -4.1891   GCCTGGGAAGACAAA          CGGGCCGCC ATTATA GGCGGCCCC           GTGGCGCGGCCCCGC  81 44
CWR61_RS14530 3061699 .. 3061725 -  -7.9  -5.06816   ATTGTCCAAGAAAAA        GCCG-GCGCGCC CGGT GGCGCGCTCAGT         GCGTCAAATGACGTC  95 21
CWR61_RS14525 3061127 .. 3061138 -  -2.2  -4.05004   GCAGTAGAACAATAA                CGCGG ACG CCG-G                AGAAGGCACGGCACT  57 246
CWR61_RS14520 3060811 .. 3060826 - -11.8  -5.28481   CAGCCAATGAAAAAA              GCCCCC TGAC GGGGGC               TTTCATGGACGCGCT 100 48
CWR61_RS14515 3060161 .. 3060175 -  -3.5  -5.01732   AACTCGGCCAAAAAA               CGCTG TTTTT CAGCA               TCACCAGTGAATATA  81 49
CWR61_RS14510 3059575 .. 3059600 - -19.1  -4.85599   GCCACGCGACAAAAA         GCCCCATTGCC TTGC GGCAATGGGGC          TTTTTTCGTGCGGCC 100 77
CWR61_RS14500 NONE
CWR61_RS14495 3056738 .. 3056764 - -18.7  -3.01924   TATCTCTGGTGAAGA         CGCGCCGGCCG GGTGA CGGCCAGCGCG         ATCAACGCTTATCGA  89 78
        clpX 3055363 .. 3055377 -   -10  -5.52909   GAAGATGCAAAAAAA               CCCGTT ACA AACGGG               TTTTCTTGCAATGGC 100 56
CWR61_RS14485 3052702 .. 3052726 - -22.9  -5.77853   AAGCCGGAAAAAAAA          CCGGGCCCGGA TTA TCCGGGCCCGG          TTTGCGGGTCGCTGG 100 65
CWR61_RS14475 3050257 .. 3050273 -  -7.2  -4.21827   TGAAACACGGGAAAA              CCGCCG GGGCG CGGCGA              TGGCGCGCCGGCTCA  72 38
CWR61_RS14470 NONE
CWR61_RS14465 NONE
CWR61_RS14460 NONE
CWR61_RS14455 NONE
CWR61_RS14450 NONE
CWR61_RS14445 NONE
CWR61_RS14440 NONE
CWR61_RS14435 NONE
CWR61_RS14430 NONE
CWR61_RS14425 NONE
CWR61_RS14420 3040983 .. 3040995 -  -6.3  -3.61398   CCCCCCCCCTAACAA                CTACA TGA TGTAG                TACCAATCCCGAAGA  57 96
CWR61_RS14415 3038871 .. 3038897 - -21.6  -5.58209   CCAAAGGGAAAAAAA         CCGCGCGCCGGA TGT TCCGACGCGCGG         TGGCATGACGGGTTT 100 44
        uvrB 3034256 .. 3034266 -  -2.6  -2.77595   TTAAAATCAAAAACT                 TAAT TTG ATTA                 TCAAGAAAATACAAG  38 159
CWR61_RS14395 3033571 .. 3033586 - -11.8  -5.00616   CTCGGTCGGAAAAAA              CCGCGC AGTC GCGCGG               TTTTCTCATTTTGGG 100 95
        iscR NONE
CWR61_RS14385 NONE
        iscU NONE
        iscA NONE
        hscB 3030340 .. 3030360 -  -2.4  -3.28712   CGCGGCGCCGCACAA            GCGGGTCA TCGGT TGCCGCGC            ATCGGGCCGGCCGTC  44 81
        hscA NONE
         fdx NONE
        iscX 3027822 .. 3027856 - -24.4  -3.53012   CGCGCGGCCCCGAAA     CGACAAGGGCCCCGTC CAT GACGGGGCCCTTGTCC     GGATGGCGCGCCAGC 100 48
CWR61_RS14350 3026743 .. 3026765 - -17.7  -3.21416   CAGCTCGAGGACGAA           GCCGCCGCC TTCCT GGCGGCGGC           CGGACGCGCCGATTT  85 121
CWR61_RS14340 3024927 .. 3024944 -  -4.7  -2.50016   CTCCAGGAGGAACAG             GACGTCC ATCA GGCCGCC              TCCGCCGCCAGCCGG  43 16
CWR61_RS14335 NONE
CWR61_RS14330 NONE
CWR61_RS14325 NONE
CWR61_RS14320 3020985 .. 3020999 -  -3.5  -2.78384   GCCCGCGTCATGACA              GCCAGC GCTT GC-GGC               GCTTGTAGTGCTTGA  40 3
CWR61_RS14315 3019069 .. 3019080 -  -3.6  -3.17075   GCGCTGGGAACGCAA                CGCC GGAC AGCG                 CCGGGACGCACCGCC  43 60
CWR61_RS14310 3018050 .. 3018067 -  -4.7  -3.01712   CCTGCGCCGGGAAGA             CTGACCG GCGC CGGCCCG              CCATGCTTGCCAAGA  46 363
CWR61_RS14275 NONE
CWR61_RS14270 NONE
CWR61_RS14265 3009007 .. 3009033 -    -2  -4.09685   CGGCAGGCGGGAAAA         CCAGGGAGCGCG CGC CGCTCGGTCTGG         CGTCAGCGTGTCGCC  58 28
CWR61_RS14260 3005414 .. 3005438 - -12.8  -6.06723   GGCGGCAAAAAAAAA          CCGCCAGTCG ATGCA CGACAGGCGG          CCAACAACGGGCGGA 100 109
CWR61_RS14240 NONE
CWR61_RS14235 NONE
CWR61_RS14230 2995834 .. 2995857 -    -8  -3.09015   TGCATAGGGATTCAA          GGGCAGCCGG GGCG CCAACGGCCC           GGCGCGAAAGACGCG  55 43
        greB 2995153 .. 2995186 - -12.3  -3.53563   ACAGGCTCCGGCAAA     CTGGAAGCCTGCCCC CGCC GGGACAGGCACCCCG      CCATACGCCACGAAC  75 92
CWR61_RS14205 2987617 .. 2987638 - -14.5  -5.55769   GCGGACAATAAAAAA           CGGCCTTTC TCGC GAAAGGCCG            TTCGGCGGGAGCGCA 100 50
CWR61_RS14200 2980297 .. 2980315 -    -3  -3.36289   CAGTACGGGAACGAA             GCCGCCAT TTT ATGCCTGC             CGGCGCCTGGCCGCA  47 72
CWR61_RS14195 NONE
CWR61_RS14190 2978179 .. 2978210 - -12.3  -3.04144   GGTTGACGGCCAAGA      CGGTATCTGTCCC GGCGTG GGGACAGGCACCG       CTCACTCCATCAGCT  68 27
CWR61_RS14170 2973859 .. 2973872 -  -2.3   -3.2918   AGACAGGCACATCAA               CACGC CGCG GCCTG                TGCGGATGGAGGCCC  44 72
CWR61_RS14165 NONE
CWR61_RS14160 NONE
        dsbG NONE
CWR61_RS14150 2970877 .. 2970895 -   -11   -4.0492   GAAGTGCGATAGAAA             TACGGCGC GAT ACGCCGTA             AAGATACACCATTAT  81 129
CWR61_RS14145 2969549 .. 2969576 -  -9.1  -4.09864   ACGCAGTGTGGAAAA        GGC-CGCCGACC GGAAT GGCCGGCGCACC        GCAAGACCCGGCGCG  76 171
CWR61_RS14140 2967214 .. 2967240 -  -4.3  -3.14132   CCCGGCTTCGAGGAA         GCCGCCCGC GCGCTGTAT GCCGGCGAC         ATGGCCAGGCTGGCG  45 115
        guaB 2964984 .. 2965021 -   -20  -4.86731   CGGTTGGAAATAAAA   GCGCACCGGCCAGAACC TGGCG GGCTCTG-CCGGTGCGC   GATGCATTGCGTGAT 100 58
CWR61_RS14125 2963298 .. 2963315 - -10.5   -5.4251   CCCAGACATAAAAAA             GCCCGCA GTTA CGCGGGC              TTAGAGGTGTTTTCG 100 75
CWR61_RS14110 NONE
CWR61_RS14105 NONE
CWR61_RS14100 2956783 .. 2956796 -  -2.3  -3.33744   TCGTGTCGGAAAAAT               CGAGC ACGA ACCCG                GGACCTCGGATGAAA  45 390
CWR61_RS14090 NONE
CWR61_RS14085 2955100 .. 2955156 - -13.1  -3.39784   CCAGGTGGAAGAACA CCGTCACGCCAGA-TCATTGCGCGCG CCTGAC CACGCGCAATGAGCCTGCCGCGAAAG CCTGCCGTCGCCGCG  77 65
CWR61_RS14070 2948881 .. 2948898 - -12.7  -2.53263   GCCATGCCCAACGCA             CCAGCGC CGCG GCGCTGG              CCGCCCTGCTGCTGG  62 411
CWR61_RS14060 2947408 .. 2947437 -  -9.3  -3.05807   GCAAAATACCATATA      GCCC-CGGC-CGG CCTGGC CCGCGCCGCGGGC       CTCACTTTACCTTGC  60 27
CWR61_RS14055 2946000 .. 2946012 -  -2.6  -3.06492   GCAGGTACTCGAAGA                CCGC ATCCG GCAG                CGCCTGGCAAGTCTC  41 231
CWR61_RS14035 NONE
CWR61_RS14030 2938528 .. 2938551 -  -3.6  -2.81464   CGACCAGCCATGATA          CTGCGCGGCC CCCC GCCCGCCCCG           GCCGTCCTATTGCGT  41 117
CWR61_RS14025 2937285 .. 2937340 - -10.5  -3.22388   GATCGAACGCATGAA GGACTGACGGCAAGCTGGCGCGCCCCG GCCGCA CGAGGCGCGCC-GCG-GCC-TC-GCCC TAGCGCCAGATCCGC  65 25
CWR61_RS14015 NONE
CWR61_RS14010 NONE
CWR61_RS14005 2933768 .. 2933782 -  -4.3   -4.2717   ACGACGTTAGTAAAA               CGATT TAACG AATCG               TACGAGCGTGGCCGT  66 187
CWR61_RS14000 NONE
CWR61_RS13995 2930923 .. 2930944 -  -2.9  -2.94099   TCGCCTGACGAGATA           GGCCCACATG GCT CA-GCGCGCC           CCGCCGGTTTTCTCG  42 16
CWR61_RS13990 NONE
CWR61_RS13985 NONE
CWR61_RS13980 2927496 .. 2927519 -    -6  -3.59979   CGCCGCCAGCGGAAA          GGCC-CCGT TCAGGCC ACGGCGGCC          TCCCGCGCGCGGCGC  57 10
CWR61_RS13975 2926209 .. 2926225 -  -4.4  -3.68024   GGTGTCAACAGACAA             CCTGTCG ATTA CGAC-GG              TTCCGACCCCTGGAT  53 160
CWR61_RS13970 NONE
CWR61_RS13965 2924962 .. 2925008 -  -5.4  -4.77036   CGGTACTACGAAAAA GTGGGGCTGGTCGCGCCGGTCA GCC CGCCCGGCGCGCGCCGCCGCTA TGCGCCGGCGGTGCT  79 380
CWR61_RS13955 2924103 .. 2924135 - -10.5  -3.53012   TGCGCCGGCCCGAAA      CCGCCAGCGCCGC CACGGCC GCGACGCTGGCCA      GTCCGATACGCCTGT  65 208
CWR61_RS13930 2918950 .. 2918968 - -13.1  -2.60798   CCAGAAACCATGAAT             GCCGGGC GCCGG GCCCGGC             CGGGTGTCGAACTAC  67 37
CWR61_RS13925 2917748 .. 2917764 -  -5.7  -5.30155   CCATCAAGGAAAAAA              TCCGCCA GAC CGGCGGG              GTGATCAATTACCAG  93 215
        proC 2913527 .. 2913558 -  -6.7  -3.29461   CAAGTCGCCCCAGAA     CGA-GCACCGCG-CCA TCC TGGACGCG-TGCATCG     CCGGCAAGGCCAAGC  52 130
CWR61_RS13895 2912264 .. 2912314 - -10.4  -2.57132   GTCGTGCTCTACAAG GCCCTGGCCG--GCGGC-GCCGGGGC GCA GCCCTAGCCGCCGCTACGGCC-GTGC GCGCCCCAGGATTTC  58 14
CWR61_RS13865 2904970 .. 2904983 -  -2.3  -2.52464   GGTGGCGTCAATGTA               GCAGA GGCG TCAGC                GGCGCGGCGCGGTGG  37 21
CWR61_RS13860 2902671 .. 2902704 -  -3.1  -4.15222   ACCCGCTGGAAGAAA     CCTTCGCGGCG TTCGAGGCCTTG CAGCGCGAAGG      CAAGATCCGCAGCTA  61 480
CWR61_RS13845 2898630 .. 2898643 -  -3.8  -2.87146   CCGGGTTAGAAGAAG               CCCA GTGCCT TGGG                GCTGTAGCTCACCAG  43 2
CWR61_RS13835 2896692 .. 2896708 -  -4.3  -2.80935   ATGGCAGGCATCATA              TCAGCGC GCC GCGGCGA              CCTCGAATTCGCCAG  43 9
CWR61_RS13830 2895256 .. 2895310 - -12.8  -2.52635   AGGCCTACCAGGAAC GCCG-GCCGGC-CTACGCGGCCGCCGC CTGA GCG-CGCCCGCGTCGCGGCGGCTCAGC CGCCGACCCGCTGCA  67 21
CWR61_RS13820 2893046 .. 2893062 -  -9.3  -2.72344   TGCCAGTTCCAACCA              GGGGGCC GCG GGGCCCC              TGCCACACGGGAGCA  56 392
CWR61_RS13810 2891604 .. 2891630 - -13.6   -3.7795   CCAAAGCCCAGCAAA         TGGCCGCCGGCG CGG CGCTCGCGGCCA         AGCGCGGCGAATCCA  82 373
CWR61_RS13795 NONE
CWR61_RS13790 2889319 .. 2889332 -  -4.5  -3.02144   GCAGGCGCTCGAAGA               GGTCA TCAC CGACC                TGCAGCGCCGCGGCG  46 213
CWR61_RS13770 2885018 .. 2885062 -  -9.2   -3.1247   ACCGGCTACACGCAA GCCGGCCATGGC-CAGCCCGCC TAC GACGA-CGGCACCGTGGCCGGC TACCCGGTGGTCCCG  56 232
CWR61_RS13750 2881711 .. 2881726 -  -3.2  -2.52516   GCGTCGATCAGCAAG              GCCG GGCGATGG CGGC               GATCAATATCCGCTG  39 110
CWR61_RS13730 NONE
CWR61_RS13725 2877776 .. 2877804 -  -5.8  -3.52073   GCTGCAATACCAGAA        GCAGCTGCGCCT GCACG AGGCGCGCCGGC        TGATGGTGGCCGAAT  55 177
CWR61_RS13695 2871621 .. 2871655 -  -3.2  -3.67597   TGTCGTATCGAACAA     TCGCCATGATGCCCGC CGC GCGGCCCGCGCGGCGC     CGGTGCAAAACAGTG  51 76
CWR61_RS13690 2870108 .. 2870154 -  -9.9  -3.61398   GCTGGGCTTCAAGAA CGGCACCGACGGCGGCATCCA GGTGG CGGCCGACGCCATCGTGGCCG CCAGCGCCCCGCATG  67 485
CWR61_RS13665 NONE
CWR61_RS13660 2865646 .. 2865657 -    -3  -2.53519   CCCAGAAATACAGAT                CAAT CATG ATTG                 GGACTCGCCTGAGTT  39 61
CWR61_RS13655 2864587 .. 2864625 -  -9.4  -3.72324   CATCGCCACGAACAA   TGGGCCCTGGCCGCCTTC ATC GAAAGCGGCCAGTTCACC   CGCCACCTCAACCGC  67 357
CWR61_RS13645 2862644 .. 2862680 - -10.2  -3.15544   CTGCACCCGCAGGAA   TGCT-GGTGCCTGTCCC GGCA GGGACAGGCACCTATTA    CGGCTGGCGGCAGGC  63 23
CWR61_RS13620 NONE
CWR61_RS13615 NONE
CWR61_RS13610 NONE
CWR61_RS13605 NONE
CWR61_RS13600 NONE
CWR61_RS13595 NONE
CWR61_RS13590 NONE
CWR61_RS13585 2848502 .. 2848526 - -18.5  -4.07568   CGGCGTCCGGTAAAA          GGCGGCCGGGC GGC GCCCGGCCGGC          AATCAGCGCGCCGCC 100 28
CWR61_RS13580 2846503 .. 2846527 -  -2.7  -2.78384   GCGGCCTGCACGACA          CCCGCGTGC CCATGCT GTACGCGGC          GCTCGGCTATTGGGG  39 230
CWR61_RS13570 2843232 .. 2843252 - -19.7  -3.53444   CGATTGTGCCGCAAA            GCGGCGCCG GCG CGGCGCCGC            AACGCCGCGCCGGCC 100 46
CWR61_RS13565 NONE
CWR61_RS13560 2841716 .. 2841747 -  -4.2  -4.25104   CGGGCGCGAGGAAAA      CGCC-TGCGTGGCCA CCG CGGCCGCGTTCGGCG      GCCACATGCGGGTGG  67 346
CWR61_RS13545 2838618 .. 2838635 -  -2.5  -2.78384   TTCGTGGTGATGATA             GGCGCGC TGAT GCTGGCC              AATTTCATCAACTTC  39 363
CWR61_RS13490 2827282 .. 2827323 -  -4.8  -3.86897   CTGATCGGCGAGAAA GGCGCCGACCTGGTGCGG GGCAGG CAGCGGCTGGCCGCCGCC  TGACCCCCGCCGGGC  60 41
CWR61_RS13465 NONE
CWR61_RS13460 2820629 .. 2820648 -  -4.8  -3.03124   CGCCAGCCCCGAATA            TCTCGCCG CCTT CGGCGCGC             CGCGCCACCCGGACG  46 430
CWR61_RS13450 2819109 .. 2819149 -  -5.2  -4.18018   GGCGCGCATGGAAAA GCGCCTGCAAGCCGGCAAG TAAG CAGGCCGGCGCCCAG-CGC  CCCCGCACACCCGCC  64 138
CWR61_RS13440 2817600 .. 2817617 -  -4.1  -4.21989   TATAACTGCAAGAAA             TATGCGA CCGG TCGCATT              ATGCCCGATTCCGCG  66 65
CWR61_RS13435 2815946 .. 2815967 -  -7.1  -2.52516   CGCTGTACGACGAAC           CGGTCTGCC TGGT GGCGGGCCG            CGCGCATCCGCTGGC  48 399
CWR61_RS13425 NONE
CWR61_RS13420 2812349 .. 2812364 -    -6  -2.52795   AATCGGCCGAATTCA              GCGGCG CCAT CGCCGA               CGCGTCGGTTTTCCT  44 358
CWR61_RS13410 2810115 .. 2810136 - -10.1  -5.75342   GCCGTCCAAAAAAAA           CGGGTGCCG TCGC CAACACCCG            CAATCACTCAACTTC 100 50
CWR61_RS13385 2807183 .. 2807220 - -22.7  -3.53012   GCGGCTCCTGGGAAA   CGGGCGCGGCCCGCGGCG CGG CGCCGCGGG-CGCGCGCA   GCGCTTACGCGGCCT 100 30
CWR61_RS13380 NONE
CWR61_RS13375 NONE
CWR61_RS13370 NONE
CWR61_RS13365 NONE
CWR61_RS13360 2803677 .. 2803689 - -10.5  -3.16564   CCTGTACGTCATCAA                GGGCG TGG CGCCC                GAGATCTCGCTGCGC  60 194
CWR61_RS13330 NONE
CWR61_RS13325 NONE
CWR61_RS13320 2796194 .. 2796206 -  -6.9  -3.18383   ACCGCGATGGATCAA                GGCCA GGC CGGCC                CGCCGTGGCGGGCCA  54 9
CWR61_RS13315 NONE
CWR61_RS13310 2793813 .. 2793840 - -10.6   -4.2535   ACACCAGACGGAAAA        GCCTTGGA-CACG CCA CGTGGTCCAGGGC        TTTTTTGTTTCCGGC  86 104
CWR61_RS13275 2788321 .. 2788364 -   -13  -3.85698   GCGCTGCTGGAGAAA GTCGGCATGACCGCCAAGGC CGAC GCCTGGCCGGTCACGCTGTC CGGCGGCCAGCAGCA  81 365
        cadR 2783040 .. 2783052 -  -4.1  -3.53444   TCATGGGCGCGGAAA                CTCTC GAC GAGAA                GAAAACATATTCTCA  51 107
CWR61_RS13245 2782400 .. 2782415 - -11.8  -5.14563   CCGCCCATGAAAAAA              CCCGGC TCGC GCCGGG               TTTTTTCATGCCGCG 100 54
CWR61_RS13235 NONE
CWR61_RS13230 NONE
CWR61_RS13225 2777158 .. 2777194 - -10.1  -3.28712   CGCGCTGGCGCACAA   GGCCGCCGCGC-GCGGC GCGCT GGCGCAGC-CGACGGCC   TACACGCTGGGCAAG  63 278
CWR61_RS13215 2776559 .. 2776576 -  -3.3  -2.64218   ATCCGCGATGACAAT             TCCGCTGC ACT GC-GCGGG             GCGTGCGGCCCCGCC  39 52
CWR61_RS13210 2774096 .. 2774114 -  -8.1  -3.31144   GGCCGATGCGCAGAA            CGCCGCGG TCAT CCGC-GCG             GTGTGCCGCAGCGCC  55 460
         ggt NONE
CWR61_RS13190 2769601 .. 2769647 - -14.3  -4.65895   GTCGCCACCGAAAAA CGGGC-GCGGCGGCGCCCG-CGC GCC GCGCCGATCGCGGCAGCCGCCCG CCGTTGCGGCGGCCC 100 57
CWR61_RS13185 NONE
CWR61_RS13180 NONE
CWR61_RS13175 2765701 .. 2765713 -  -4.7  -2.52464   TCCTGCCGCAATTCA                TCCCC GCC GGGGT                GGATGTGCTGGGGTT  42 224
CWR61_RS13165 2764499 .. 2764522 - -11.7  -3.13343   ATGGCAAGGACGCAA          GGCGCG-CGG CTGAT CCGGCGCGCC          GTGGCTGCCCCGGGT  66 148
CWR61_RS13145 2761816 .. 2761848 -  -3.4  -3.80733   GGCAGGCCAGAATAA      CCCGGCGTTT TTAAATTTGCGTT AATCGCCGGG      CCGCGGCGGCCGCTT  54 68
CWR61_RS13135 NONE
CWR61_RS13130 NONE
        adeC 2754775 .. 2754805 - -25.6  -3.53811   CCGACGCCTCGCAAA       CAGACAGGCCGGCA TCT TGCCGGCCTGTCTG       TTTTTGGGCGCGAGC 100 47
        aceE NONE
        aceF NONE
        lpdA 2741413 .. 2741436 - -18.2  -2.52464   CGCCGCGCCAACGCA          CAAGGGCCCC GCAA GGGGCCCTTG           TGCTGCCATGCCGCG  86 45
        flhD NONE
        flhC 2737545 .. 2737586 -  -4.4   -2.7386   AACCGACGCCAATGA TCCCCCCAGA-CCCGTCG GGCAAAAA CG-CGGGTTATGGGGGGT TTTCTGGTGCTTTTG  42 63
        motA NONE
        motB NONE
CWR61_RS13045 NONE
        cheA NONE
        cheW 2732658 .. 2732691 - -13.8  -4.64334   AAGCGTTGAACAAAA     CGGCGGGCGGCGCGC CGCCC GCGCACCGGCC-CCG     TCAGGACGCCACTTT 100 26
CWR61_RS13030 NONE
CWR61_RS13025 NONE
CWR61_RS13020 2728962 .. 2729001 -  -2.7  -4.43909   ACTCCAAGAAAATAA  TGTCCGGACGCCCGCGCC GTTGG GGCGGCGGCGTC-AAACG  CGATGCCCGCGGTCG  65 19
        cheY NONE
        cheZ 2727918 .. 2727930 -  -3.3  -3.28712   CTGCCCTGGTCAGAA                GCCCA GGC TGGCC                AGCAGGTCGTCGACC  45 7
        flhB NONE
        flhA NONE
        flhF 2721525 .. 2721537 -  -4.8  -4.19238   CCTCGAACGCGAAAA                CACC CTGGT GGTG                GAATTCCTCCATGCC  66 472
        flgB NONE
        flgC NONE
        flgD NONE
CWR61_RS12960 NONE
CWR61_RS12955 2716235 .. 2716255 -  -8.1  -4.32034   GCATCATGATGAAAA            CTCCTGGCG CGG CGCCTGGCG            CGCGCGCATTGATAA  75 41
        flgG NONE
CWR61_RS12945 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 2709243 .. 2709268 -   -14  -3.05384   TTGCTTTCCATCGAA         CACGCGCTCC TCGAGG GGAGCGCGCG          CCATTTCCCGACTAT  76 57
CWR61_RS12920 NONE
CWR61_RS12915 NONE
CWR61_RS12910 2704867 .. 2704910 - -20.4  -4.67904   CAGGAATTTCAAAAA TGA-CGCTTTCCCCGGCGCGC GAG GCGTGCCAGGGAAAGCGGCCA CGCCGGCGGCAATCC 100 61
CWR61_RS12905 2703009 .. 2703044 - -22.6  -4.56597   CGCTGCCTGTAAAAA    GACGATCCGGCGCGGC GCTG GCCGCGGCGGATCGCC     GCTTTCCCGCCCGGC 100 92
CWR61_RS12900 2701087 .. 2701132 - -10.9  -3.33696   CTGGCCGGCAAGTAA CCCCCTCGGGTGCCTGTCCCC GCAG GGGGACTGGCACCCGCTGACT CCCTGCGGTGCCTGT  70 227
        fliE 2688778 .. 2688799 -  -9.4  -2.88544   CTGGACGCCCATATA           CCGCCGCA ACTCTA TACGGCGG            TGGCCGAACTGCTGG  53 518
CWR61_RS12790 NONE
CWR61_RS12785 2682088 .. 2682104 -  -3.5  -3.31415   GACGACGAAATCGAA              GCCGGTC ACT GTGCGGC              GATGAAACCGTTGTC  47 14
CWR61_RS12780 NONE
CWR61_RS12775 2680026 .. 2680063 -  -6.2  -3.28712   GCCGGCTTGCGACAA  GCCGGCCAGCGCCGCGCC GTTC AG-GCGTCGTTGGCCG-C   GTAGCCCATGTTGAA  51 8
        rpsB NONE
CWR61_RS12745 2672628 .. 2672662 - -13.5  -3.83144   GTAAGACAAGAAATA    GGCCGGC-AGTTCGGG AAGC CCCGCCCTGGCCGGCC     CCTACGATGACGCGT  86 40
CWR61_RS12740 NONE
CWR61_RS12735 2671247 .. 2671276 - -14.3  -2.63301   CAGATTCCCATATCA       GCACCGGAGCCGT CGAT ACGGCCCCGATAC        CTCTAGCGGAATTAT  70 37
        uppS NONE
CWR61_RS12725 NONE
CWR61_RS12720 2668270 .. 2668298 - -10.1  -3.59979   CGGGTGGACGCGAAA        GGCGGCCCGGCGC GTC ACGCCAGGCCGAG        ATTGCCGGCGAATGA  71 11
        rseP NONE
        bamA 2664448 .. 2664481 -  -2.9  -3.72893   TATTGTGCCACTAAA     CTGCGGGACGGCCGG GCAA CCGGCCATTTCCCAT      GTTTTCATGCGTAAC  54 65
CWR61_RS12705 2663818 .. 2663828 -  -2.4  -2.64218   AGGGTCCAGCAGAAC                 CGGC ATG GGCG                 TGCTTATCGGCCCAG  38 29
        lpxD NONE
        fabZ NONE
CWR61_RS12690 NONE
CWR61_RS12685 NONE
CWR61_RS12680 NONE
CWR61_RS12675 2658801 .. 2658819 -  -4.5  -3.23216   GTCGACGACCACCAA             GTCGATC GAGGA GATCGCC             ACCACGGTGCTGCAG  47 76
CWR61_RS12665 2655466 .. 2655486 -   -14  -5.63374   GCAAGACGAAAAAAA            GCCTCGCC GCAAG GGCGAGGC            TTTCTTTTTCCAGCG 100 46
CWR61_RS12655 2654141 .. 2654160 -   -15  -3.05384   CCCTCTGCTAGTGAA            GCCTGCCG GCGC CGGCAGGC             AAGGTCATGGTTGCG  80 30
CWR61_RS12650 2653157 .. 2653180 - -19.6  -3.59979   GGCGCGGACGCGAAA          GGACGCGCCG CGGC CGGCGCGTCC           GGGGTGGAGCTCACG 100 36
CWR61_RS12645 2651941 .. 2651961 -  -9.7  -3.67622   CAGCGCGAAAAGGAA            CGCGTCATG AAG CACGACACG            CGCGTCAGCCAGCGC  68 30
CWR61_RS12635 NONE
CWR61_RS12630 2650575 .. 2650586 -  -5.8  -3.30781   TTAACGTAAACGTAA                GTCG TTGG CGAC                 TATGTTACGCCCGAA  53 117
CWR61_RS12625 NONE
CWR61_RS12620 2648141 .. 2648178 -  -6.3  -2.74563   GTCATAGGGGAACGA  GCGGACC--GGC-GCGCC TAGGC GCCGCGGCCCAGGTCCGC  CAGCGGATGCGGCTG  46 2
        mmsB 2647173 .. 2647209 -  -9.4  -3.05816   GTATCGGGCATGCAA   GCCTCTCGCGGAATGGC CCTG GCCATCCGGCCAG-GGC    GGGATCAGTTGCGTT  60 30
CWR61_RS12610 2646717 .. 2646744 -  -6.8  -2.90075   GGCGCGCCAAGTATA        GGCCGCCGCGCC GTTC AACGCGGCGTCA         CCCGCACCGCGGTCA  49 12
CWR61_RS12605 2645864 .. 2645911 - -10.4  -3.53012   CGCTGCTGTTCGAAA CCACGCTGGCCAGCCTGCCCGGC GGC GACCTGC-GGCTGGGCAGCGCGA ATGGCCCGCGCATCG  65 96
        mltG NONE
CWR61_RS12590 NONE
        holB 2642060 .. 2642073 -  -9.5  -3.25719   GGATCACAGGAGCAA               CGGGC CGCG GCCCG                ATCGTCACTGGCAGG  62 30
CWR61_RS12580 NONE
CWR61_RS12575 2640134 .. 2640153 -  -9.2  -5.55664   CCACGAGCAAAAAAA            TGCCACCC GGGT GGGTGGCG             CGTGATCGGGTTGGG 100 248
CWR61_RS12570 2639257 .. 2639276 -  -7.9   -4.3255   GTTGGAATGAAGAAA            GCCGTAT GGATGG ATACGGC             CACAGGGGTACGTCA  75 38
CWR61_RS12565 NONE
CWR61_RS12560 NONE
CWR61_RS12555 NONE
CWR61_RS12550 2636009 .. 2636059 - -13.8  -3.61398   CGCGCCTTGCAACAA CCTTCGGGCAGGCCGCCCGGATCG GCC CGATCCGGGCGGCCAACGCCTACA TCCTAAGCCCGTGGC  84 52
CWR61_RS12545 2634532 .. 2634562 - -16.1  -4.07687   AGCCTGCGCTGAAAA      CGGC-GCCGGCCCC TCGC GGGGCCGGCTGCCT       TGCGCGCCGATGCGG  95 67
CWR61_RS12495 2624218 .. 2624266 -  -7.2  -3.40163   CATCATGAAGATCAA CCCCGCGCTGCTGATGGGCGCCA CCGC CGGCGCGCG-CAGCCACTCGGGA CCGGCGCGCGAAGCG  58 164
CWR61_RS12475 2617323 .. 2617348 - -11.7   -3.0395   ACAGATTCCTGAATA         TCCGCCCCGGC CTGC GCCGGGCCGGC          CTACGGGCTGCCCGG  65 26
CWR61_RS12470 NONE
CWR61_RS12465 2615893 .. 2615924 -  -7.8  -4.46775   TAGTGAAAACAGAAA      CACCGGACGCGCCC GTCA GGGCGTGGCCAGCA       TGGCGACCGTAATCT  81 9
CWR61_RS12460 2615029 .. 2615049 - -15.4  -5.26119   TGCGCAAAAAGAAAA            CCGGCGCC GCCAG GGCGCCGG            TCTGCGCGCGGGGCG 100 65
CWR61_RS12450 2612819 .. 2612859 -  -5.2  -3.09785   GCATACCGCAATAGA  CGCGCCAGCCGCACGC TTAATCCCT GTGGCCGGCTGGCGGG  AAGGATGCGACACGG  47 49
CWR61_RS12445 2611840 .. 2611894 - -14.9  -3.57039   GATGCACAACCATAA CGCCCTGCCGGGCCCGCCGGTTTGAC CCGC GTCAAGCCGGACGGCC-GGCATGGCT CCGCGCCCGGCCCGC  87 94
CWR61_RS12440 2611257 .. 2611295 - -16.6  -3.32769   TCTGGAAACGACGAA   TGGACGGCCCGTCCCGCC GGA AGCGGGCCAAGCCGGCCA   TCATAGCAATGTCGC  90 64
CWR61_RS12435 2610215 .. 2610237 -  -9.9  -3.21938   GGAAAAGTCTAGCAA          CGCGCGCGAA GGCG TTCGC-CGCG           CCGTTTCAATTTCCT  62 31
CWR61_RS12430 NONE
CWR61_RS12420 2607399 .. 2607434 - -10.2  -3.39895   GGCCTGACCAAGGAA    GCCGTCTCGGCGCACG ACGG CCAGCGCTGAGCCGGC     CGCCGCGCCTACACC  67 34
CWR61_RS12400 2603742 .. 2603784 - -10.4  -2.52464   TGCTGGCCGAATCGA CCGGCCGCCCGCTCGTGCC GGTCGA GGC-CGCGCTGGCCGCCAG CGTGGCTGGCCAGGC  55 109
CWR61_RS12390 2601746 .. 2601760 -  -2.1  -2.66634   TATCGCAGCACAGGA               CATCC TTTGT GGATA               TGGGCCGGCACGCCC  38 117
CWR61_RS12385 2601042 .. 2601060 -  -4.4  -3.44051   GTTCCACTACGAGAA             GGCGCGCA TGA TGGGCGGC             AAACCCTCGGCGCCC  49 284
CWR61_RS12355 NONE
CWR61_RS12350 NONE
CWR61_RS12345 2592440 .. 2592487 - -13.2   -3.9392   CTCCAGTGTAAACAA CCCGCCGCCAGTCGCGCCGGCGC TCA GCGCCCG-GCGACGCGCGCCGCG CCATACAGGCGTAGC  86 1
CWR61_RS12340 2591576 .. 2591594 - -13.8  -2.70932   TCGCGTGGCCAACGA             GGCCGCGC TGG ACGCGGCC             ATCCAGGACTGGGTC  67 380
CWR61_RS12310 2585556 .. 2585573 -  -8.3  -2.90496   TGGCGCGCGAAATCA             GCGGCGG CGAA CCGCTGC              CCTATCCCGTCACCC  53 249
CWR61_RS12270 2576691 .. 2576715 -  -3.4  -3.61398   CGTGGCGGTGAAGAA          TTCGGCCGCC TACAC GGCGTCCAAG          GGCGGCATCAAGCAG  51 312
CWR61_RS12225 2568141 .. 2568161 -  -3.8   -3.3482   GAAGGTTTCAAGGAA            GTCGCCTC GGCCT GCGGCGCC            AAGCTGGCGCCGGCG  47 507
CWR61_RS12185 2560122 .. 2560135 -  -5.2  -3.05384   CGTGCCGCGACTCAA               GGCG CACATC CGCC                ATACGCCGGGTTTCG  46 391
CWR61_RS12170 2557486 .. 2557515 -  -9.9  -3.05963   ACGCGCACGGCAACA       TCACCGGCGGCAC CTCG GTGCTGGCGGCGA        TCCGCACCATCATCC  59 432
CWR61_RS12140 NONE
CWR61_RS12135 NONE
CWR61_RS12130 2549784 .. 2549802 - -11.6  -3.57144   TTTTCGACCTGGAAA             CCCCGCGC CTG GCGCTGGG             GCGCGTCGCCTTTCT  71 332
CWR61_RS12115 2546968 .. 2547024 -  -3.7  -3.22516   AACACCAGATCAACA GTCATTCTCGTCCC-CTGCCCCGT-CGC CGGC GCAAACGCGGCGGCGGGGCGA-AATGCC TACTTGAAGCCCAGC  47 25
CWR61_RS12110 NONE
CWR61_RS12105 NONE
CWR61_RS12100 NONE
CWR61_RS12095 2543606 .. 2543635 -  -3.4  -3.18735   GGAAGATTCTACCAA       CCTGCCCCGCCCC TCCCC GGGG-ACGGCCGG       CCCTGTCACACGGAG  45 31
CWR61_RS12090 2542368 .. 2542404 - -16.5  -3.90291   AGCGGTTCAACGAAA    CGACGCTGCTATGCCTG TAC CTGGCCCAGCAGCGCCG    CTACACCATCGTCAG  93 514
CWR61_RS12050 NONE
CWR61_RS12045 NONE
CWR61_RS12040 2532752 .. 2532764 -  -3.3  -3.10611   TCCACCTCAAGAAAT                CGGGT CAT ATCCG                TTGTTTCTCCTCGTT  43 50
CWR61_RS12035 NONE
CWR61_RS12030 NONE
CWR61_RS12025 NONE
CWR61_RS12020 NONE
CWR61_RS12015 NONE
CWR61_RS12010 2526055 .. 2526071 - -15.1  -3.34398   GGGCGGGGGGAAATA              GCGCGCC TCA GGCGCGC              CCGGCCGCTTCCAGC  84 16
CWR61_RS11990 2521193 .. 2521207 -  -8.5  -3.61398   CCGCCCGGCGAATAA               CGGGC TTCAG GCCCG               GGCATTTCCCCGCGC  65 17
CWR61_RS11985 NONE
CWR61_RS11980 NONE
CWR61_RS11975 2517087 .. 2517113 -  -2.2  -3.01712   CCTCGCGGCTCAAGA         GCGAGTTCATCT TCG ACATGAGCTTGC         GGCTGGCCTGTCCTG  41 435
CWR61_RS11965 2515949 .. 2515973 -  -7.8  -3.32993   GGACGGACAGACGAA         GCCGGCC-GGA TTCA TCCAGGCCGTC          GATCAGCAGCTCTAT  55 234
CWR61_RS11955 2513693 .. 2513707 -    -7  -3.14132   CCCGCCGGTCAGCAA               GGCCCG TGC CCGGCC               GCCGGCTCGCGCAGC  51 42
CWR61_RS11950 2512108 .. 2512130 -  -3.2  -3.51557   CTCCGCAAAGAAAAG           GATGGTCGGG CCG CCCGCGCGTC           ACGGGCGGGAGGGCG  49 24
CWR61_RS11945 2510983 .. 2511009 - -13.6  -2.57132   TCCGGCGGCCAGAAG         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCCATGGAGCCGGAC  66 341
        napE 2508489 .. 2508507 -  -8.1  -3.14344   GAGCTGCGCCATCAA             CTGCCGG GAGGG CCGGCAA             GCAGCTGGTAGAACC  55 3
CWR61_RS11920 NONE
        napA NONE
CWR61_RS11910 NONE
CWR61_RS11905 NONE
        ccmA NONE
        ccmB NONE
CWR61_RS11890 NONE
        ccmD NONE
        ccmE NONE
CWR61_RS11875 NONE
CWR61_RS11870 NONE
CWR61_RS11865 NONE
        ccmI NONE
CWR61_RS11855 2497081 .. 2497110 -  -9.9  -2.52896   TCATGGTTGAAGGCA       GGGTCCGTGGCTGG CCG CCAGACGCGG-CCC       AATACGCCAGTAGAC  55 89
CWR61_RS11850 2496495 .. 2496509 - -11.4  -2.78015   TCAAGGATTGCAAAG               TGGCGC TAT GCGCCA               AGCTGGCGCAGGCTC  62 16
CWR61_RS11845 NONE
CWR61_RS11840 NONE
CWR61_RS11835 2492772 .. 2492819 - -14.1  -2.89564   CGTCTATGGCATACA GAGTTTGCGGGTGCCTGTCCC CATGCT GGGACAGGCACCCGGGTAATC ACGCTTCCGATACCG  73 24
        leuC 2488021 .. 2488033 -  -3.4  -2.68434   TTGCATATTAGACCA                GATC CCTGT GATC                GACGATGGCGCCGGC  40 5
        leuD NONE
CWR61_RS11805 2485941 .. 2485951 -  -8.2  -2.57132   GCGGTGGCCTACAAG                 GGCG CGG CGCC                 GGCGCTGGTGGCGCT  51 449
CWR61_RS11775 2479258 .. 2479301 -  -5.9  -3.70902   CGCGCCAGATCGAAA GCGC-CAACGCCGCCTTCGG GCCGT CGGAAGCCGAGGTCGTGCGC GCGCACGCCATCATG  61 182
CWR61_RS11760 NONE
CWR61_RS11755 2473200 .. 2473237 -    -9   -3.4072   CATCCGCGACGACAA   CGCCTTGACCGCCCGGC TGGGC GCCCGGCTG-CAGGGCG   AGTACGCGGCCGCAG  61 276
CWR61_RS11730 NONE
        clsB NONE
CWR61_RS11720 2465801 .. 2465832 -   -10  -3.21099   GCGCCGCAGCAGCAA      GCGCCGTGCCCG CGGTCAAC CGGCCGCGGCGC       GCCGGTGGCGCCATT  65 9
CWR61_RS11715 NONE
CWR61_RS11710 NONE
CWR61_RS11705 NONE
CWR61_RS11700 2461758 .. 2461785 - -12.6  -3.53012   TCTCCTTGGGGCAAA        CCACGCGTGCCG CAAG CGGCGCGCCTGG         CGCCGCGCGCTCAGA  75 353
CWR61_RS11690 2461389 .. 2461419 -    -3  -2.55351   GGGTGGGACAGGAAG       CCGGCAAGGCGCTG CGT CAGGGCCGGGCCAT       GGCCCGGCAGGCGCT  39 11
CWR61_RS11685 2461006 .. 2461041 -  -3.2  -3.73775   GGCAGGCTCAGCAAA   CAGC-GTGCCCGCCTC GGGTCA GCGGC-GGCACAGCAG    GGCGCCCACCAGCAT  54 8
CWR61_RS11680 NONE
        ligD NONE
CWR61_RS11670 2456187 .. 2456208 -  -4.3  -3.15663   ACCCATTTGCAGGAA           CTGGCGCAGC AGC GCGACGCC-G           CCTTCGATCGCGTCT  45 321
CWR61_RS11645 NONE
CWR61_RS11640 2452413 .. 2452431 -    -8  -2.66272   TCTGATGGAAAGCGA             CGCCGACC CCG GGCCGGTG             AACCTGGGCAATCCC  48 261
CWR61_RS11575 2438607 .. 2438619 -  -7.7  -3.41051   GTACGTGCACGAGAA                CAGCT GGA AGCTG                ATCGGCGTGGCCATC  58 117
CWR61_RS11565 2437579 .. 2437590 -  -7.2  -3.21099   CCCTGGTACGACGAA                GCCG TGGC CGGC                 GCCATCGCCCACATG  53 86
CWR61_RS11540 NONE
CWR61_RS11535 2430790 .. 2430831 -  -9.9  -3.55487   CGACATCAACGACAA CCCGCCCGCCACGCCGGCGC AAG GCGCTG-CGCCGCCGCCGGG ATATCCCAACACGGG  67 86
CWR61_RS11525 2429324 .. 2429334 -  -2.4  -3.14132   GCGCTGGTTCAGCAA                 GCGC CGT GCCC                 GGATTGTTCGCCAGC  42 8
        glgA NONE
CWR61_RS11515 2424532 .. 2424545 -  -2.3  -2.96873   ACGCTCAGGAAAGCA               GGGGT CGGG ACCAC                AGGCGCCATAGCCGG  41 1
        treS NONE
        glgB NONE
        glgX NONE
        treZ NONE
        malQ NONE
        treY 2410362 .. 2410401 - -11.5  -3.14132   CCTGCCGGGCATGAA CGGCCAC-GCGCTG-GCGCA GGC CGCGCGCAG-GCTGCGGCCG GGGCTGCGCATCATT  64 169
        ptsJ 2404430 .. 2404440 -  -3.2  -3.19371   ATTTACTTAAGTGAA                 GGAA ATT TCCC                 AAGTCTGTCCTGCGC  45 2
CWR61_RS11460 NONE
CWR61_RS11455 NONE
CWR61_RS11450 2402736 .. 2402758 -    -4  -3.15544   GGCCAGGCGCAGGAA           GCGCGCCC GGCTCAT GGGCAGGC           AGGCGGCGGGGTGCG  45 50
CWR61_RS11445 2401629 .. 2401687 -  -2.1  -3.53444   GGACGTGCTCGGAAA CCCTGCGCGCGCAGATCGATGCCGCCTT GCGC AATGCGGC-CGGACAGGCGCGCGATGCG TGCGGGCAGGGGGAC  47 201
CWR61_RS11430 2399824 .. 2399847 - -19.6  -5.41746   AAGCGTCCAAAAAAA          CAGGGCCGCC CCGG GGCGGCCCTG           CGATCGCGGCGCGGC 100 43
CWR61_RS11425 2398380 .. 2398399 -  -2.7   -3.6502   GACTCCGGACGGAAA            GGGCCCG GCGAGG CGGACCG             ATGCCCTTACTGTAG  50 81
CWR61_RS11420 2397393 .. 2397443 -  -5.6  -3.42996   CACCATCTACCACAA CCCGCGT--TGCAGCACGTCGC-GCA ACG TGCTGCAA-ATGCTGCGCGACGCGGG CATCGAGCCCACCAT  52 404
CWR61_RS11400 NONE
CWR61_RS11395 2392288 .. 2392304 -    -3  -2.52464   GGGGCGCTGAAGTCA              TACATG GTGTT CATGCA              GGCTCTCCAGGGGGA  39 104
CWR61_RS11390 NONE
CWR61_RS11385 NONE
CWR61_RS11380 NONE
CWR61_RS11375 2390232 .. 2390244 -  -2.6  -2.78384   GTGCGGTTCATGACA                GCGC CCTCT GCAC                GACCACGGCTACGGC  38 5
CWR61_RS11370 2389459 .. 2389475 -  -4.4  -3.10641   GAAGGCATCAGGGAA             CGAG-GG CGGT CCACTCG              GGGCTGGAGAATTTC  45 1
CWR61_RS11365 2388520 .. 2388534 -  -8.5  -3.41051   GCAGCCGGATGATAA               GCGCG GCCGG CGCGC               GGCAAAGGGGCGAAC  60 86
CWR61_RS11360 2387930 .. 2387942 -  -4.7  -3.02739   GGGAACGGATACAGA                CGGGC CGC GCGCG                GCGTCCGTGGAGACA  46 82
         psd 2386909 .. 2386928 -  -2.1  -3.86346   TGAGGGCTCCAGAAA           CGGC--GGC AATG GCCAGGCCG            CAATCTAGCAAGCCC  55 76
CWR61_RS11350 2385481 .. 2385509 -    -3   -4.2828   GGGCATCGACGAAAA       GGACGG-GCTGGC GTTC GACAACACCGACC        CCGAGACGGTGCGTC  65 199
CWR61_RS11325 NONE
CWR61_RS11320 2381350 .. 2381389 -  -7.9  -3.69094   AAGTCATGACCGAAA GC-GCCGCCATCGTCATGC ACCT GCATGATG-TGGCGCCCGC  CGCCGGACTGGCGCC  64 435
CWR61_RS11305 2379248 .. 2379258 -  -2.4  -3.72576   GCGGGTGTCACGAAA                 GCCC TTC GGCC                 TTCAGCGCGGCTTGC  53 7
CWR61_RS11300 2378063 .. 2378078 -  -5.4   -3.6968   GCAGAACGCCAACAA              GGCC-CT GCA AGTGGCC              GACCGCGGCTATGTG  58 301
        ugpB 2369974 .. 2370004 - -21.1  -3.18118   CCAGGTGAGAATACA       GGCGGCCGGCCGG TCATG CCGGCCGGCCGCG       ACAGGCAGGCCAGAC 100 147
        ugpA NONE
        ugpE NONE
CWR61_RS11245 2366922 .. 2366945 - -13.8  -3.57144   CCGCGCAGTCCGAAA          GCCGCCGGGA GATT TTCCGGCGGC           TTTTTTGCTGGACGA  84 135
CWR61_RS11235 2364858 .. 2364886 - -14.7  -4.08767   TTCAGGGCGTGAAAA        GATTAACGGACGC CGG GCGTCCGTTAATA        TGGATCGGGCGCGGG  95 53
CWR61_RS11230 NONE
CWR61_RS11225 2355090 .. 2355108 -  -6.6  -3.57144   CCCTGCATTGGGAAA             CCGTCGAC GAG GCCGACGC             CGCGGCGGTGCTGGA  57 344
CWR61_RS11155 NONE
CWR61_RS11150 2336806 .. 2336840 - -13.5  -4.16681   AACAGCAGGGGAAAA    GAGGC-CCCGCGCCGC GCCC GCTGCGCGGGCGCGTC     GTCTCCCTCGACGGA  89 97
CWR61_RS11145 2334448 .. 2334469 - -15.9  -4.77165   GCGCGCAGAAGAAAA           GCCGGCATC GAGA GATGCCGGC            TTTTTTCTTGCCGGG 100 160
CWR61_RS11130 2330994 .. 2331012 - -10.2  -2.62184   CGTCGCTGGAGACCA             TCCGCCAC ATG GTGGCGGC             CGGGATCGGGGTGAC  55 268
CWR61_RS11095 2321466 .. 2321524 -  -6.5  -4.06419   TTCGTGGACAAATAA GGCCGCGCAC-CGCCAGGAACGACCGCC CTCG GGCGGTTTTTCTTTGCCCGCGCGCAGGC GTTCATGCGTCGAAC  67 28
CWR61_RS11085 2319208 .. 2319235 - -15.6  -4.59773   TGCTACGGGGAAAAA        TGCAAAGCGGCC GGAT GGCCGCTTTGCC         GACAAACAAGGCAGT 100 107
CWR61_RS11080 NONE
CWR61_RS11075 2316642 .. 2316666 -  -4.1  -3.37499   GAACAGGCCAAGGAA          GACTGGAGCAG GAA CCGCTTCGGCC          AGGTCGTGCCAGGCG  47 101
CWR61_RS11060 2313884 .. 2313910 - -12.2  -3.02144   GCATCGGCCGCAATA         CCATCACGCGCA AGC TGCGCGAGCTGG         GTATCGACGACGCAT  68 52
CWR61_RS11030 2305790 .. 2305823 -   -13   -4.2828   CGCCACGCAGGAAAA     CGCCGCCATGGCCG AGCAGA CCGCCGCGGCGGCG      GCCTCGCTGGAAACG  95 101
CWR61_RS11010 2301423 .. 2301458 - -20.4  -2.84602   GGCATTGCAGTAAAC    CCGCGTGCCTGTCCCC GCAC GGGGACTGGCACGCGC     TGAATCCGGGGTGCC 100 154
CWR61_RS11000 2299585 .. 2299621 -  -6.4  -3.55444   GGCGGATGCGGCAAA   GCGGCAGGGGGGAAGGC CAGG GCCCTCCCGTC-GCCTC    ACTCCAGGTTCTGCG  57 24
CWR61_RS10995 2298867 .. 2298880 -  -9.5  -2.71712   GCGCCTGCGCGAAAT               GCCGC CCGA GCGGC                TGCAGTCGCGCAAGC  56 131
CWR61_RS10985 2296096 .. 2296117 -  -7.9  -3.61398   CGTGCTGTTCAACAA           TGCCGGGCGC GGC GCGCC-GGCC           GTGCCCATCGAGGAA  60 501
CWR61_RS10975 NONE
CWR61_RS10970 2293855 .. 2293884 - -17.9  -4.01135   CCGAAGAATAGCAAA       TCGGCCGGCGCGCC GGG AGCG-GCCGGCCGA       TTTTTCGCCTTGGGG 100 91
CWR61_RS10965 NONE
CWR61_RS10960 NONE
CWR61_RS10955 2290289 .. 2290322 -  -7.3  -3.21912   GGCCGAACGCATGAA     CCACTATCCGTCCGA GTTG TCGGGCGGCCAGCAG      CAGCGCGTGGCCATC  53 335
CWR61_RS10935 2287004 .. 2287036 -  -8.5  -3.61715   CATCCTGTCGAACAA    CCG-CCGCCATGCGCC GTTC GGC-C-TGGCGGGCGG     CGCGCAGGGGGCGAT  63 184
CWR61_RS10920 2281800 .. 2281856 -   -12  -2.93316   ATTAAGAAAAAGTTA TCGC-GCGCG-CGGCCCGCGTGGCGGGG GGC CGCCGCCGCTCGGGCCGTCTTGCCGCGC TGGGGAAAACCCCCA  68 59
CWR61_RS10915 NONE
CWR61_RS10910 NONE
CWR61_RS10905 NONE
CWR61_RS10900 2278040 .. 2278067 -    -7  -3.57462   GATGGGATTTTCAAA        TTGCGGCATACC GCGG AGCACACCGCAA         GGCATGGGCAACCAG  59 197
CWR61_RS10895 NONE
CWR61_RS10890 NONE
CWR61_RS10885 2275221 .. 2275253 - -13.4  -3.29144   TGAGTCCGGCGAGAA     CGCGGC-CGCGACGC TACA GCGTCATGTGCCGCG      GCAGCCAGGTGGCGA  74 6
CWR61_RS10850 2256047 .. 2256068 -  -2.3  -2.60615   ACTGCGGGGAAACAG           GCG-ATGC AGGACGG GCATGCGC           GGCGCTAGGCGAGAT  38 30
CWR61_RS10845 2251933 .. 2251963 -    -9  -3.73775   CCTACGGCCAGCAAA      GCCTGCT-CAGCC TGCGAC GGCTGCAGCGGGC       CGGGTGCAACCTTGT  67 416
CWR61_RS10800 2242746 .. 2242778 -  -9.7  -3.14132   CTGTTCGCCGACGAA      CCCACCGGCAGCCTC GAT GCGGCCACCGGCGAA      ACCGTGATCGACCTG  60 161
CWR61_RS10790 2241563 .. 2241581 -  -5.9  -3.16564   CGCCGAGGCCATCAA             GGGCGAC GCTCA GTCGGCC             GCGGGCTGAGCCAGC  49 16
CWR61_RS10780 2238631 .. 2238641 -  -2.4  -3.73068   TCGGTAACTGAACAA                 GAGG GCT CCGC                 GTCAGGCGGCGGGCC  53 27
        rlmJ 2237313 .. 2237371 - -11.5  -3.14881   GAAGCGGCCGATGAA GGGCGCATCGCCGGCGAGAACGCCG CGCGCTATC CGGAGGTCGCGCCGGGCATGCGCCG GGCGGCACTGGGCGT  64 421
        cueR 2234500 .. 2234522 -  -8.3  -3.29263   ACAGGCGCGGCAGAA           GGCGCGCGA GCAGG CCGAGCGCC           TGGCCGAGGCGGCCG  59 72
        plsY 2226853 .. 2226880 -  -9.8  -2.52464   GGCGGCGGCAACGCA        GGCCGCCATC GTCGAGGT GCTGGCGGCC         AAGGCCATCCGCGCC  55 456
CWR61_RS10705 2224643 .. 2224671 - -20.3  -4.08216   TGACGGCCTCGAAAA        CAGGCAGGCCGCC CGA GGCGGCCTGCTTG        CGGGACGAGGCGCGG 100 48
CWR61_RS10700 2223437 .. 2223447 -  -8.2  -3.53012   GGTCGGTGGGCGAAA                 CGCG TGG CGCG                 ATCCCGCGCCGTGCC  62 43
CWR61_RS10695 2222809 .. 2222824 -  -4.6  -3.64703   GCGTGCGCAGCGAAA              CCTTCG ACGC CGACGG               CGCGCAACTGGAACT  54 147
CWR61_RS10660 2215442 .. 2215452 -  -8.2  -3.21747   GGATGGGAGGAGTAA                 CGCG CTG CGCG                 GGCGCGTCGCGACGC  59 104
CWR61_RS10655 NONE
CWR61_RS10650 2212857 .. 2212871 -  -2.7  -3.75169   GACGACTCCATGAAA               CGGGG ACCGG CCACG               CGGGGCAGGGGTTCT  53 39
CWR61_RS10645 2211969 .. 2212003 - -13.5  -3.63515   GCCCATCGGCAAGAA    GGTGGGCCTGGCCACC GAGC GG-GGCATGGCCCACC     TCGTCATCGACGAGC  78 64
CWR61_RS10590 2201464 .. 2201493 - -19.3  -3.05384   GGGCGGGTGAGGCAA       GGGCGCCTGTCCC CGCG GGGACAGGCGCGC        CGTCAGTTGAGCTGG  93 28
CWR61_RS10570 2195687 .. 2195704 -  -4.1  -3.05962   GGTACAGAAAAACAG             TGAAGCG TCCC CGATTCA              TGGGGGGAGTGGAAC  45 41
CWR61_RS10565 2194900 .. 2194953 - -19.3   -3.0806   GCGAAATCCGCAAGA GGCGGCGCGCCGATCGGCGCCGCCC AGGG GGGCGGGTCAGGCCAGCGGGCCGCC CGCCGCCGGCGGGGC  93 8
CWR61_RS10560 2193408 .. 2193459 -  -3.6  -3.61398   GCTGTGGTGGAAGAA CGTGGCCACCGCC-GTCACGGGCG AGAAGA CGC-CGCAGCAGGCCATGGACACG CTGGCCAACGAAATG  51 237
CWR61_RS10525 2186710 .. 2186731 -  -5.7  -4.07568   GTTCGGGCGGGAAAA           GGACTGGGC GAGC GCTCAGGCC            GTGGCGGCGCCTGCC  66 19
CWR61_RS10520 2184949 .. 2184961 -  -3.3  -2.55351   GCGCGCTACAGCAAG                GCCGA GGA TTGGC                ACGCCTACGTGGTCA  40 147
CWR61_RS10510 NONE
CWR61_RS10505 2182843 .. 2182887 - -25.7  -2.52543   ATCCGCGCGAATTGA CGGCCGCGGCCTGATGCCCAG CTC CTGGGCGTCAGGCCCCGTCCG GGGCCGGCCGCGCCT 100 57
CWR61_RS10490 2179524 .. 2179564 -  -3.1  -3.84406   CCGCTACGACAACAA CGATCC-GCGCCCCTGGC TGGCCG GCCAGGAAGGCTGGCGCG  CGCGCGCCAATTCAG  56 444
        queE 2177447 .. 2177467 -    -4  -2.78679   GCGGGTGACGGAAAT           CATCGCGCA TCTC CG-GCGATG            GGGCGGACAGTCATG  43 36
        queD 2176975 .. 2176991 -  -6.5  -3.30124   GGCCACGCGCGAGAA              CGGCC TGTAGGC GGCCG              TGCGCCGGGGGCCGT  55 40
CWR61_RS10450 NONE
CWR61_RS10445 NONE
CWR61_RS10440 NONE
CWR61_RS10435 NONE
CWR61_RS10430 NONE
CWR61_RS10425 2168898 .. 2168925 -  -7.6  -3.03124   GCGCAGCTGGGAAGA        GGCGCTGGGCTTG AAG CAGGCCCCGC-CC        GACGGCTCCACGCTG  54 53
        imuA NONE
CWR61_RS10410 NONE
CWR61_RS10405 2162365 .. 2162401 - -11.5  -2.62184   CGGTCGGCGATACGA    CGGCGCCCGCCATCAGC GTG ACCGATTACGAACGCCG    CATCGTCTACGCGCG  59 479
CWR61_RS10385 2158813 .. 2158825 -  -4.7   -4.1552   CAGGGCGCGAAGAAA                GGGCG CAT CGGCC                GCACCACGGTGCTGA  66 284
CWR61_RS10375 2157352 .. 2157385 - -13.1   -3.0497   AGAGCATCTGGAACA     CCGACGCGCTGCGCGC CAT GCGCGAAGCG-GTCGT     GTACGGCGTGCCGTC  66 109
CWR61_RS10365 2154872 .. 2154890 -  -4.5  -3.90112   GTTTCCGTAACCAAA            CGTGCACG GCGC CGCGC-CG             GCGTAATGCGGGACG  58 77
CWR61_RS10360 NONE
CWR61_RS10350 NONE
CWR61_RS10345 2149792 .. 2149818 -  -3.7  -3.18264   CGTGGGAGCGAGCAA        GCC-GCGTCACCT GGA AGACG-CGCTGGC        GGCGCTGGCCCTGCG  45 107
CWR61_RS10330 NONE
CWR61_RS10325 2145644 .. 2145656 -  -6.2  -2.50816   GCCGGACTGAGGAAT                GCGC TAGCC GCGC                GGCTGGATCCTGCCG  45 16
CWR61_RS10305 2142034 .. 2142047 -  -3.1  -3.88291   CAGCAGTCGCATAAA               GTTAC GCCA GCAAC                GTGATTCGCCGAAAT  56 336
CWR61_RS10270 NONE
CWR61_RS10265 NONE
CWR61_RS10240 2127658 .. 2127671 -  -3.1  -2.62263   AGGGCGGCTACAGCA               GCTTGG CGC CCA-GC               GGGACGTCGCGGTCG  39 4
CWR61_RS10235 NONE
CWR61_RS10230 2126464 .. 2126495 - -11.7  -3.82083   CGAGCATAACGCAAA     GCGGCCCC-TTTCCG CGAA CGGAAACGGGGCC-C      GATCAGGGTGGGCGC  79 67
CWR61_RS10225 2124739 .. 2124792 - -13.6  -3.78775   TGGTCGAGCAGGAAA TGGCGCCCGGCG-GCAAGCGCTAGC GCCAG GCCGGCGCGGGCTCGCCGGGCGGCC CGCGCGCGGACTACC  86 36
CWR61_RS10215 2123235 .. 2123249 -    -7  -3.91897   CCGTTCATTCAGAAA               GGCCAG GTC CAGGCC               ATCGCGGTATCGAGC  67 354
        prpR NONE
CWR61_RS10190 2117175 .. 2117197 -    -4  -3.57561   TTCGAACCTGGGAAA           CATCATCCGC TGG GAGGTCGATG           GCATCAAGCTGGACC  51 329
CWR61_RS10180 2115257 .. 2115268 -  -7.2  -3.79906   CCACGTTTATAACAA                GCCC GCGG GGGC                 GTTCCAAGTGGCGTG  62 86
CWR61_RS10175 2114841 .. 2114855 -  -3.5  -3.30124   CTTCATCGCCGAGAA              GGC-GC TCGG GCTGCC               CAAGTCCTATTAGGG  47 126
CWR61_RS10135 2103543 .. 2103559 -  -5.1  -3.54424   GGCGAGGCGCGGAAA              TGGCG GCCGTCG CGCCA              GGGCGGATGCGTGGC  53 118
CWR61_RS10130 NONE
CWR61_RS10125 NONE
CWR61_RS10120 NONE
CWR61_RS10115 2098154 .. 2098169 -  -6.8  -2.78384   CGTTGTTCGAGGACA              GCGACG CCTG CGTCAC               GCCCATCCTGGATTG  46 301
CWR61_RS10080 NONE
CWR61_RS10075 NONE
CWR61_RS10070 NONE
CWR61_RS10065 NONE
CWR61_RS10060 2088467 .. 2088477 -  -3.2  -4.09685   TCGTACGGGCCAAAA                 CACC TCC GATG                 ACGCGAGTGCCGCGA  60 235
CWR61_RS10055 2087538 .. 2087559 -  -8.7  -3.30771   CGAGAGCGTGCAGAA           CGCCATCGAC CAG GCCGA-GGCG           GTGGCCGACGATATG  59 328
CWR61_RS09925 2059369 .. 2059387 - -17.4   -3.9461   CGTGGGCAAGAAGAA             CCCCCGGC CGT GCCGGGGG             CTTTTTGCGTTCAGG 100 36
CWR61_RS09915 NONE
CWR61_RS09910 NONE
CWR61_RS09905 NONE
CWR61_RS09900 2054636 .. 2054658 - -11.2  -3.57144   CGGGCGAGCGCGAAA           GCTAGGGCGC GCG GCGCGCCAGC           GCGGCCAGCGCATCG  74 4
CWR61_RS09880 2051886 .. 2051905 - -16.4  -3.64703   CCGCCGGCAGGCAAA            CGGCCCGC GCAA GCGGGCCG             TTTGCGTAGGCGGGC  91 51
CWR61_RS09790 2030926 .. 2030942 - -15.1  -3.65812   GGCGCCGCAACAGAA              CCGGGCC GCT GGCCCGG              TTTTTTTTGGGCGTA  87 257
CWR61_RS09715 NONE
CWR61_RS09710 NONE
CWR61_RS09705 NONE
CWR61_RS09700 NONE
        trxA 2004004 .. 2004045 -  -2.1  -4.06864   GGGAGATAAGAAGAA GGGTTCGGGCGGCGGGCC ACGGACG GGCCCGC-GCGGGAATCA GGGGGAATGCGCGGG  57 66
         rho 2002670 .. 2002689 - -16.4  -5.07652   CGCCGCAAAACAAAA            CCCCCGGC GCGG GCCGGGGG             GCGGGACAGGCATGG 100 53
CWR61_RS09660 1996107 .. 1996119 -  -4.7  -4.09243   GACATGGCGTGAAAA                GCGGC TTT GCGGC                GGGGAAAAACCGTTA  64 38
CWR61_RS09655 1995200 .. 1995212 -  -6.2  -4.11501   CCAAATACAAGGAAA                CCGC GCGCG GCGG                ATTGGCGGTGAATAT  69 250
CWR61_RS09645 1991840 .. 1991854 -  -8.5  -3.14132   GCGCGCCTGCAGCAA               GGCGG CGCGT CCGCC               CAGGCATCGCGCATC  56 191
CWR61_RS09625 NONE
CWR61_RS09620 NONE
CWR61_RS09615 1985429 .. 1985439 -  -4.6  -4.07568   CGCTTCGCGCGAAAA                 CGCG TAA CGCA                 GGACCGGGCGGCCGC  64 93
CWR61_RS09570 1973829 .. 1973852 - -11.7   -4.8622   CGCGCCAATGAAAAA          GGCCCGGCA GCGATG TGCCAGGCC           TTGATCAACGATTTG 100 39
CWR61_RS09560 1971169 .. 1971185 -  -7.9  -2.64472   GATGTCTGAAATCCA              GGCGGTC TAT GACCGCG              GCATCCTGCGCATCA  48 287
CWR61_RS09550 1969804 .. 1969840 - -10.7  -3.50393   TCCGATTGGATAGAA    TGGCGGCCGGCGGGC TTGCGTT GCGGGCAGGCCGCCA    TCAGGGGCGCGCCAG  69 26
CWR61_RS09540 1969308 .. 1969329 - -17.3   -4.4078   CGCGCCCAAGCAAAA           GGGCAGCCC TGAT GGGCTGCCC            TTTTTTCTGGTGCCG 100 33
CWR61_RS09520 NONE
        kynB NONE
        kynA NONE
CWR61_RS09505 1964339 .. 1964354 - -10.4  -5.86061   CGCGAGGAAAAAAAA              GCAGCC CGCA GGCTGC               TTTCTGGTGCGCCTC 100 58
CWR61_RS09500 NONE
CWR61_RS09495 1960999 .. 1961016 -  -6.9  -3.89614   GCCAAGGGCGAGAAA             CACGCCA AGAG CGGCGCG              CATCACGGCGCCCAC  63 141
CWR61_RS09475 NONE
CWR61_RS09470 NONE
CWR61_RS09465 1954993 .. 1955025 - -13.4  -3.01791   ATTCGGCCGCCAAGA     GCGCCCTGGT-CGGA TGCA CCCGCACCTGGGCGC      TGGAGCTCGCCGAGT  69 290
        hpnC NONE
        hpnD NONE
CWR61_RS09440 1949688 .. 1949709 -  -3.6  -3.61517   ATTCCGGCTCAAGAA           CCACGCCG CGACGC CGGCCTGA            GGAGTTTTCGTGCTG  51 445
CWR61_RS09415 1946563 .. 1946573 -  -3.2  -3.45366   CGGTCAATGAATGAA                 TAGC AGT GCCA                 GCACGACCGGGATGA  49 3
CWR61_RS09410 NONE
CWR61_RS09405 NONE
CWR61_RS09400 NONE
CWR61_RS09395 1942658 .. 1942687 - -15.1  -2.82987   CGAAGATGGAGGAGA       CCGGCGCATT-CCC GCT GGGCAATACGCCGG       CCGAGTTCGCCGTGC  72 121
CWR61_RS09380 1938913 .. 1938938 -  -5.9  -3.01924   CAGCCGCCTGGAAGA         GGGCGGGCGCG CCGA CGCGCCGGGCA          CGGTGCGCTTCCTGT  48 339
CWR61_RS09360 1935510 .. 1935534 -  -3.4  -3.30771   CGACATCCGGCACAA         GGTGC-GCCTC GACG GCGGCCGCGCC          GAGCTGGCCGTGGGG  47 309
CWR61_RS09345 NONE
CWR61_RS09340 1928344 .. 1928354 -  -3.2  -3.03441   CATGAGCCCGGAAGA                 CCAC GAG GTAG                 AGATCCGGCCGCAGG  43 374
CWR61_RS09305 NONE
CWR61_RS09285 NONE
CWR61_RS09280 1921266 .. 1921293 -   -14  -4.56597   TTGGTTGTCGAAAAA        GCCGCGGCGGGC GCGG GCCCGCCGCCGA         TCGGGTTGCGCTCAG 100 37
CWR61_RS09275 1920338 .. 1920377 - -15.1   -2.9162   GAACTCCGGAAACGA CTG-CGCGGCG-GCGCC GGGGCGGG GGCGCACGCCGCGGCAG  GATGGCGCGCCGAGG  79 69
CWR61_RS09270 NONE
CWR61_RS09265 NONE
CWR61_RS09260 1918120 .. 1918149 -  -5.5  -2.70143   AGTCCAACCATACCA       TCGCCCCACGGCC GCGC GGCCATGCGCCGG        TTCATGGCGCCGCGG  46 65
CWR61_RS09255 1916819 .. 1916864 -  -3.8  -3.61517   ACCTGTGTCGAAGAA TGCTCGGGTCGCCGGCGCGCGC GGGC GCGAGCGCCATGG-C-CGCGCA AGGCGGCCGCGGCGC  53 302
CWR61_RS09250 1915892 .. 1915931 - -14.2  -2.85668   TATCCGCATACCATA  GC-GCCGCGCCGGCGCCTT GCC AAGGCGCGTGCCCGGCCGC  TCAAGGCGCGCGCCG  73 26
CWR61_RS09240 1914894 .. 1914910 -  -3.5  -3.40403   CGGCGGGGAGGAGAA              GGGGCGC TAT GCGCCGT              TTTTCAGGATCGCGT  47 15
CWR61_RS09230 1912457 .. 1912477 -  -6.7  -3.34398   GCGCGGGGGGAAAGA            GTGCCTGCC GAC GCCAGGCGC            GTCGAGGTGCGCCAA  55 78
CWR61_RS09225 NONE
CWR61_RS09220 1909129 .. 1909153 -  -6.4  -3.02511   GCTATCGTCTCAAGA         CCTGAG-CGGC GCGC GCCGGCTCAGC          GGGCCGGCGACTGCT  50 21
        bioF 1896711 .. 1896740 -  -4.2  -2.73243   AGCCATGCTCGAAAT       GCAGCAACGGGCG GGGCG CGCTCAT-GCCGC       TTGCCGCACGGCGCG  42 17
CWR61_RS09140 1896079 .. 1896092 -  -2.3  -2.52464   TGGGTGGGGAACGCA               TGCTC ATGC GGGCA                GCCCGGCGAGAAAGG  37 15
        bioD NONE
CWR61_RS09130 NONE
CWR61_RS09125 1893122 .. 1893180 - -12.3  -3.01712   GGCTGGCGGGCAACA GCC-ACCTG-TCGGCCGCGGCCCTGATGG GGG CCACCACGGCGGCGGCCATGCTGGCCGGC GGCCCGGCGTTCTGG  66 411
        queF NONE
CWR61_RS09050 1874331 .. 1874380 -  -8.5  -3.28712   CCTGGGGCTGGAGAA CCGCCTGGC-C-GACCGCATCGGC CTGCT GTCGG-GCGGACAGCGCCAGGCGG TCAGCCTGCTGATGG  59 381
CWR61_RS08965 1856377 .. 1856389 -  -3.3  -3.18199   CAATCCGTAAGCCAA                CCCAG GAC CTGTG                CTTATACCCCGTTGC  45 159
CWR61_RS08960 NONE
        rpmG 1855615 .. 1855636 - -18.7  -4.86731   TGCGGCCAAATAAAA           CGGCCCCGC CAGG GCGGGGCCG            CTCACCATGGCGCGC 100 68
CWR61_RS08940 1852839 .. 1852869 - -22.6  -3.85698   TCGCGGCCGCATAAA       CGAAGAGCCCGCCG GTG CGGCGGGCTCTGCG       GTTTGACCTGAGACG 100 49
CWR61_RS08935 NONE
CWR61_RS08930 1851004 .. 1851030 -   -15  -3.36112   CGAAAAAATAGGTAA         CGGACCGCGCCC GGC GGGCGCGGGCGG         TCAAAACCATCAATT  84 51
CWR61_RS08925 NONE
CWR61_RS08920 NONE
CWR61_RS08915 NONE
CWR61_RS08910 NONE
CWR61_RS08905 1844728 .. 1844751 -  -2.2  -3.01712   GCGGTTCCGCGAAGA          TCTGTGCCTG GCGG CGGGCGCCGA           TATCGAGGCGCGCGG  41 90
CWR61_RS08895 NONE
CWR61_RS08890 NONE
CWR61_RS08885 1840983 .. 1841002 - -11.4  -2.72649   ACGCCATCACAGAAT            CCGCGCTG GTCT CAGCGCGA             CGCGTACCGTCCCTG  62 506
CWR61_RS08850 1832999 .. 1833042 -  -3.7  -3.61398   CGGGCCGGTGAAGAA CATGGCGAACGCGGCGGGCGC ACGC GCGCCGGCGG-GTT-GCCGGG GGCGTACGCGTGCGC  53 105
CWR61_RS08845 1831847 .. 1831904 -  -7.7  -3.99678   AGCGCTACAACGAAA CCGACACG-ATGC-GGCCGGCGGCGCCGG CGGC CCGGCGC-GT-GGCCTGAATGCGCGGCGG GCCCCCATGCGGGGA  70 64
CWR61_RS08835 NONE
CWR61_RS08830 1826178 .. 1826220 -  -3.8  -3.23692   GACCAGCACCAGCAA CGCCACGTCGTCGACCAGCG CTT CGGCGGGCGTGAACGCCGCG GGCAATAGCCAGGGT  45 481
CWR61_RS08800 1822726 .. 1822741 -  -3.2  -3.87346   AGTACAACGACGAAA              GCGG GCGCTGAG CCGC               CTACAGCACCTTTTG  56 26
        acnB 1818894 .. 1818913 - -16.4   -5.5112   TCGAGTAACAAAAAA            GGCCCGCC TTGC GGCGGGCC             CTGGTCATGGCCGAA 100 48
CWR61_RS08780 NONE
CWR61_RS08775 1817436 .. 1817448 -  -3.3  -3.28712   TTCCCGCTCGTATAA                GCCCA CGC CGGAC                GCCTATCTTCGTGCC  47 265
CWR61_RS08760 1813614 .. 1813635 -  -2.1  -4.09864   ATCGAGGCGTCAAAA           GTTCCCGCGC GCG GGGCGGGG-C           AGGGCTGACATGCTC  58 108
        acnA 1810717 .. 1810740 - -17.4   -4.8622   CCGCCCAATGAAAAA          CCCCCCGGCC AGCA GGCCGGAGGG           CTCGGGTCACGCAGG 100 59
CWR61_RS08745 1808727 .. 1808759 -  -4.6  -2.61264   TCGCTCACGCACAAT      CTGCGCGATGTGCG CATGC CGCACGGGGCGCCG      CCCGCTGACTACGTG  42 279
CWR61_RS08735 1806825 .. 1806845 -    -4  -3.79687   ACGCGGCAGAAAATA           TCGGCG-CGC ATG GCGGCGC-GA           TCCCGTCAGTGGAAC  56 31
        earP 1805672 .. 1805688 -  -2.2  -2.64274   AGGCTGTCAAAGTGA              GGCC TTGAGCACC GGCC              GATCCGGGCAAAGCA  38 60
         efp 1804972 .. 1804991 - -16.4  -6.34424   GGCGTAAAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTTCGGTTGCGCCC 100 57
CWR61_RS08620 1784677 .. 1784698 - -10.1  -2.73007   AAGACGCCGCGAAAT           CCGCCC-GCG GCC CGCCAGGCGG           GAAAAATAAATTCAT  59 208
CWR61_RS08615 NONE
CWR61_RS08610 1782016 .. 1782045 -  -6.3  -3.01712   CGGCGTGGTCGAATA       CCTGGC-CGACCGC ATC GCGGTCATGCACGG       CGGGCGCATCGTCGA  48 323
CWR61_RS08570 NONE
CWR61_RS08560 1767902 .. 1767946 - -29.4  -3.06815   ATCCTCCTCAATACA GACGCGGGATGGTGGCGCCC ATGGG GAGCGCCCCCATCCCGCGTC GAACGATCCAAACAA 100 41
CWR61_RS08555 1766372 .. 1766393 - -12.9  -5.53991   GAGGGACGAAAAAAA           GCCGGCGCC CGAA GGCGCCGGA            CTTGCCCGCGGGCTG 100 44
CWR61_RS08550 1765219 .. 1765236 -  -4.1  -3.53091   ATGCTGGCGCTGAAA             GTCGC CCGCCCCT GCGAC              GAGGTGCTGGCCGAG  49 177
CWR61_RS08510 1756157 .. 1756169 -  -6.3  -3.28791   AGCGTCCGGGGATAA                CATTG TTG CAATG                CAGCATTGATATGCG  51 133
CWR61_RS08505 NONE
CWR61_RS08500 NONE
CWR61_RS08495 NONE
CWR61_RS08490 NONE
CWR61_RS08485 NONE
CWR61_RS08480 NONE
CWR61_RS08475 NONE
CWR61_RS08470 NONE
CWR61_RS08465 1742415 .. 1742428 -  -9.5  -3.29704   CGGCGATGAAACACA               GCCCG TCGC CGGGC                CACCCCGTGCTAGCG  62 41
CWR61_RS08460 1739878 .. 1739911 -   -11  -2.78384   CGCGGCTGCAGGACA    TG-GCC-GCGGCCCGC GCCG GCGGGGCGCCGGCGCA     CGAGGTCGACCTGGT  59 316
CWR61_RS08425 1731563 .. 1731583 -  -2.3  -3.31144   CGGCCAGGGGGATAA            CCCCTGGTG GCG CGCCGGCGG            CGGGCGGCTTCAGGC  45 35
CWR61_RS08420 NONE
CWR61_RS08415 1728108 .. 1728137 - -12.1  -3.04144   GCTTGACCGCCAAGA       CGGTGTCTGTCCC GGTT GGGACAGGCACCT        GTTGCGGGCGGCTCT  68 43
        pgaA NONE
        pgaB NONE
        pgaC NONE
CWR61_RS08360 1715452 .. 1715466 -  -5.6   -4.1891   CTGGCCGAAGAGAAA               CTGTCC GGC GGGCAG               GCCGACCTGGTGGCG  66 180
CWR61_RS08345 NONE
CWR61_RS08340 NONE
CWR61_RS08335 1712659 .. 1712669 -  -2.4  -2.54523   GCAGACTGGAATGCA                 TGGG TTA CCCC                 TGGAGGTGGGTTTTC  38 19
CWR61_RS08330 NONE
CWR61_RS08325 NONE
CWR61_RS08320 NONE
CWR61_RS08315 NONE
CWR61_RS08310 1707045 .. 1707072 - -18.6  -3.11687   GCAAGCAGTACCGAA        GCGGCTTGAGAA TGTC TTCTCAAGCCGC         TTTTTTTGCGTCTGT  89 174
CWR61_RS08275 1700080 .. 1700095 -  -3.2  -4.07568   CCGTGCGGTGGAAAA              GGGC GAATTGCA GCCC               GATACCCCGGTGGAA  60 198
CWR61_RS08170 NONE
CWR61_RS08165 1680874 .. 1680884 -  -2.4  -3.06796   CGCCAGCCTATTCAA                 GGAC TTC GGCC                 TTTTCGATGATCACG  42 7
CWR61_RS08160 1680054 .. 1680083 - -19.3  -3.01497   CTACGCCAAATGACA       CGGCGCCTGTCCC TGCG GGGACAGGCGCCT        CATGACTGGGCCTTC  93 39
CWR61_RS08140 1675516 .. 1675533 - -12.7  -3.34962   CCCGAGAGCGGAGAA             GACGCCC GTGA GGGCGTC              TTTTCTTTTTGGAGG  77 248
CWR61_RS08130 1673478 .. 1673502 - -12.7  -2.78463   ATCTGTTCCACCAGA          TCCGCCGCGCC CTG GGCGAGGCGGG          GTTCCGCGCGCCCAT  63 100
CWR61_RS08095 1665782 .. 1665800 - -13.8  -3.28791   ATTTGCCGGGGATAA             CGCCGGAC CGT GCCCGGCG             ACGCCTTGCGGCCCC  78 329
        mutS NONE
CWR61_RS08080 1661180 .. 1661198 -  -4.5  -3.62096   CCCCATTAGGGGAAA             CCAGTAG TCAGG CTACAGG             AATCATTCAACGGCT  53 228
CWR61_RS08075 1660819 .. 1660840 - -17.3   -4.4078   TTCCTGCAACGAAAA           TGGCCCCCG TCTC CGGGGGCCA            TGCGCATGCCTGCCC 100 105
CWR61_RS08070 1660004 .. 1660027 - -18.2  -5.36441   TGGCGACACAAAAAA          CCGGCAAGCC TTGC GGCTTGCCGG           TTTTTTTTGGCCTGG 100 50
CWR61_RS08045 1655549 .. 1655583 - -10.9  -3.78736   GACAGAGGCAGGAAA    GATCGAATGGCTGTAT GGGC ATACAGCCA-TCGAGC     GGTCCGCGCGCTAGA  77 36
CWR61_RS08040 NONE
CWR61_RS08035 1653879 .. 1653893 -  -8.5  -3.35813   GTCGAGGTTAACGAA               GCCGC GCCGA GCGGC               CCCTTATTCCAGGCA  59 275
CWR61_RS07995 1645813 .. 1645823 -  -4.6  -2.98823   GCCCCGCTAGAGATA                 CGGC GTG GCCA                 GCCAGATCACCTTGT  46 6
CWR61_RS07985 NONE
         alr 1643455 .. 1643471 -  -3.5  -3.01712   TGTTGTTCGCGAACA              TGGCGCC GCG GGCGCGG              CCAGTGTGATGCGCG  43 195
CWR61_RS07970 NONE
CWR61_RS07965 NONE
CWR61_RS07950 1634441 .. 1634451 -  -2.4  -4.07568   CCCGGGTGCGGAAAA                 GCAG CAT CAGC                 ACGCTGGCCGTGGTG  58 450
CWR61_RS07840 NONE
        sycN NONE
CWR61_RS07830 NONE
CWR61_RS07825 NONE
CWR61_RS07820 NONE
CWR61_RS07815 NONE
CWR61_RS07810 NONE
CWR61_RS07805 1612714 .. 1612754 -   -14  -3.14132   CGCCTGCTGCAGGAA GCCGCG-CGCTGGCG-AGCC GGC GGCCACGGCAGCGGCGCGAC CCAGGCCCCCAATAT  72 100
CWR61_RS07790 NONE
CWR61_RS07785 NONE
CWR61_RS07780 1608281 .. 1608309 -    -8   -4.4448   AAATCTTGAAACAAA       CTGGGCG-CAGCC TGGC GGCAGCCGCCCCG        GATATCACGGCACGT  78 30
CWR61_RS07775 NONE
CWR61_RS07770 NONE
CWR61_RS07765 NONE
CWR61_RS07750 NONE
         ggt 1601464 .. 1601493 -  -3.3  -3.14931   GGCACGGCCGAGGAA       GTCGCCCAGGCCG TGGT CTGGCTGGCCGGC        GAACAGGCCTCGTAC  45 114
CWR61_RS07680 1589577 .. 1589617 - -10.3  -3.35679   CCTGGTGACCGACAA CGGCCACGCCGCCC-GGC TCGCCT GCCTGGCCGGCCTGGGCG  TGATGATGGCGCCGC  63 207
CWR61_RS07565 1564619 .. 1564654 - -11.1  -3.85698   GTGCCGCCGGAGAAA    CGGCATGCCCGCCGCG GGGGG CGCGGCGGGC-TACAA    GCGGTTACTCGCCGA  79 30
CWR61_RS07560 1562821 .. 1562832 -  -5.8  -3.53811   TCGAGCTGCCCGAAA                CCCT GACC AGGG                 TGCAGCGGCGCGATA  57 415
CWR61_RS07550 1561474 .. 1561492 -    -3  -2.63631   TCAATCCCTACAGCA             GCGGCG GTTTCCA CGACGC             CGGGCCGGACTACCC  38 68
CWR61_RS07530 1558093 .. 1558120 -    -4  -4.03811   GATACCAGGAAACAA        CGATGCGC-GCCA TTG TAGCGGCGCGGCG        CTAGCTGGCCGCCGC  60 26
CWR61_RS07525 1557501 .. 1557532 - -21.7  -2.54193   CACCAGCCGAATCCA      CGGGTGCCTGTCC CCACGC GGACAGGCACCCG       CGTCAGACGCTCAGC 100 28
CWR61_RS07510 NONE
CWR61_RS07505 1553777 .. 1553828 - -16.5  -2.78992   AGTCATCCGAAGAAG TCGATGCCTGCCGG-GGCCGCCGC GCCAG GCGGCGGCCGCCGACGGGGATCAG GTGCCCGGGGTGGCG  84 22
CWR61_RS07500 NONE
CWR61_RS07495 NONE
CWR61_RS07490 NONE
CWR61_RS07485 NONE
CWR61_RS07480 1549077 .. 1549090 -  -9.5  -2.70932   CCTGGTGGCCAACCA               GCCGG CCAC CCGGC                TGCACAGCCAGCTGG  56 432
        lrhA 1540460 .. 1540483 -  -6.6  -2.71681   CAACGCGCTCAAGGA          GCGC-GGCGGC AGC GACGCCTACGC          CATCGGTTTCACCGT  46 116
CWR61_RS07420 1535454 .. 1535472 -  -3.7  -4.07568   GCTGGCCCTGGAAAA             GGCCCGC TCCAC GCAGGTC             AAGGATTTTGCCCAG  60 476
        galU 1534117 .. 1534129 -  -3.3  -3.66288   CATGGCCGAATACAA                CCGCC ACA AGCAG                GACGCGGTGCGCGCC  51 99
CWR61_RS07395 NONE
CWR61_RS07390 NONE
CWR61_RS07385 NONE
CWR61_RS07380 NONE
CWR61_RS07375 1528091 .. 1528104 -  -2.3  -2.64099   GGTCGGGAGCAGAAT               GCATG GGCT CAGGC                CGGCGAATAGCTGGC  38 20
CWR61_RS07370 NONE
CWR61_RS07365 NONE
CWR61_RS07360 NONE
CWR61_RS07325 NONE
CWR61_RS07320 1516171 .. 1516184 -  -3.1  -3.70104   AAGTACGCAATATAA               CGATGC TGT GCA-CG               AGATAACCATAGGGG  54 165
CWR61_RS07315 1515443 .. 1515479 -  -2.8  -3.17392   CAGGGTTGAAGGCAA   GGCTGGCCGGCGGCG GATTCACG CGCCGCCGCTC-GAC    TGAAGGGCCTTGACG  45 7
CWR61_RS07310 NONE
CWR61_RS07305 NONE
CWR61_RS07300 1512982 .. 1512998 - -15.1  -3.25823   GCCTCCTTACATGAA              CCGGCGC TTT GCGCCGG              CTTGTTGTTATTTAC  83 33
CWR61_RS07295 NONE
CWR61_RS07290 NONE
CWR61_RS07285 NONE
CWR61_RS07280 NONE
CWR61_RS07275 1509120 .. 1509130 -  -6.8  -3.68222   CCTGAACCGCAACAA                 TCGC GCG GCGA                 TCCAGAAATACGAGC  61 73
CWR61_RS07145 1480797 .. 1480822 -  -3.9  -3.16668   GAAGAGCGCGATGAA         TGGTAGGCCCCG CCC CGGGGCAT-CAA         TCGGTCTGGTGATCC  45 22
CWR61_RS07140 1479899 .. 1479917 - -13.8  -3.09327   CCAGGTTACGCAAGA             GCAGGCGG CCG CCGCCCGC             GCGGCCGGCCAGCAC  76 119
CWR61_RS07110 NONE
CWR61_RS07105 1474309 .. 1474336 -   -15  -3.83868   GACCAATAAAATCAA        GGCCTTACAGAA ATTG CTCTGTAAGGCC         TTTGTCCAATATGGC  91 274
         ppx 1466246 .. 1466281 - -20.4  -2.59431   GCTCCTCAGAAGTCA    GCGGGAGCCAGTCCCC CTTC GGGGACAGGCTCCCGA     GGATTGGGTTTCAGG  91 36
CWR61_RS07040 1459203 .. 1459242 -  -5.4  -3.07816   CCGCGACGCACGGAA  CGTGCCGTCG-GGCGCCGC AAC GCGGGGCCGCGCCGCCTAG  GCGGCCAGCCTGAAG  47 75
CWR61_RS07030 1455669 .. 1455710 -  -3.5  -3.28712   CCTGGTCGCCGAGAA TCTCGGCCACGTGAAGGCGG TCG CCGCCATGACCGGGCAG-GA CCTGGACCGCTACAT  47 520
CWR61_RS07020 1454398 .. 1454429 - -10.1  -3.14344   GATGCGCGCCATCAA     CGGC--GCGGCCTGC TTCA GCGGGCCGCCAGCCG      CTGCGCCAGACGCAA  63 8
CWR61_RS07015 1452935 .. 1452984 - -27.1  -2.53876   CCGGATGTGAACGGA CGAGGGCCACCCCGCGGGGCGCGC GCG GCGCGGCCCGCGGGGTGGCGG-CG GCGCCTAGAGCGCGG 100 30
CWR61_RS07010 NONE
CWR61_RS07005 NONE
CWR61_RS07000 NONE
CWR61_RS06995 1448123 .. 1448134 -  -3.6  -4.13767   CGGGCTACGTGAAAA                CCGC CATG ACGG                 CCCACAACCCTTATG  63 410
         tal 1441782 .. 1441825 -    -5  -2.68093   CGAAACCGAAAAACT CTAGGGCGCGGCGCGGGCAT GCGC ATGCCCGCGCGCCGCATTCC GCTAGGCCGCGCCCT  44 27
CWR61_RS06915 1425672 .. 1425704 - -14.2  -2.64616   CGGGGATGGATACGA     CGGGGTGCCTGTCCC AGCG GGGACAGGCA-CACG      CACGGGCAGGCGCCA  70 77
CWR61_RS06910 1423830 .. 1423874 - -35.8  -3.06492   GCACTGACCCCAATA CGGCCACCGGCCGGGGCGCG CTTGT CGCGCGCCGGCCGGTGGCCG TACAGTGGGGGTGTC 100 444
CWR61_RS06880 1418865 .. 1418906 -  -5.7  -4.01411   TACGAAAAACTCAAA TCCGGATCGTGGATGTGCGG GCG CGGCACAGCCGCG-CCCGCA TGCTTACTGTGCCTT  64 29
CWR61_RS06875 1417320 .. 1417342 -  -9.8  -3.28712   CTGGGTGGTGGACAA           CCAGCACGGC GAA ACCGTGCTCG           AACTCGACGCCACCA  63 320
CWR61_RS06790 1403486 .. 1403505 -   -15  -4.07568   CGTCGGCCTGGAAAA            CCGGACGC GCGA GCGTCCGG             TTTTTTCATGGCCCC  95 44
CWR61_RS06775 1400223 .. 1400266 -  -5.8   -3.0127   CGAGGGAATTACAGA TCGCCTGAGCGAGGCAGCGA CGCT CCCCTGCCTGGGTGAGGCGG GCGTCCCCGGTTTCA  48 38
CWR61_RS06770 1398821 .. 1398867 - -12.8  -2.63348   CCGAGCAACATGAAG GGCTC-CTTCGCGCGCGCCGC GGCAGG GCCGCGCGCGCGCCGTGCGCC ATGCGCCTCAGCTGG  67 33
CWR61_RS06765 NONE
CWR61_RS06760 NONE
CWR61_RS06755 1396653 .. 1396673 -  -9.8  -3.63991   CAGTATCGGCAAGAA            CGGGTATA GCCAA TATACCCG            TTGCCGGGCGGCCCG  68 59
CWR61_RS06750 1396131 .. 1396150 -  -6.5  -5.10497   AAGCCATCGAAAAAA            GATTTGC GCCAAG GCAAATC             CGATGGCTTTTGCGG  93 103
CWR61_RS06745 1395605 .. 1395617 -  -4.7  -3.08032   GCCCGCGGAAAATCA                GCGGC GGT GCTGC                GGCGGACGGCTGGGC  47 10
CWR61_RS06740 1395175 .. 1395202 - -11.2  -2.75074   TGCACTGGAACATCA        GCCTGAACGACG CGCG CGTCGATCCGGC         CATCTTCATCGGGGC  59 70
CWR61_RS06720 1391545 .. 1391574 - -11.3  -2.87132   CGCGGCGCCTACATA       GGCGGCC-TGGTGG TCA CCGCCGTGGCCGCC       CGGCTGGTGGGCAAC  61 124
CWR61_RS06695 NONE
CWR61_RS06690 NONE
CWR61_RS06685 1387661 .. 1387678 -    -4  -3.60805   ACAGCGTAGCGCAAA             CCGGGC CGTCCT GCCCGC              CGGTGTGGCGCGCCG  53 44
CWR61_RS06680 1386910 .. 1386931 -  -8.1  -3.64599   CTATTACACCGCAAA           CGA-TGTTGC GGT GCAACATTCG           TGTGGCCGGGGCGCC  63 48
CWR61_RS06675 NONE
CWR61_RS06670 NONE
CWR61_RS06665 NONE
        fabI 1381080 .. 1381091 -  -7.2  -3.25223   GATCGACATCATGAA                GCGC CGCG GCGC                 CGAGGTGCCGATTCC  55 470
CWR61_RS06640 1376075 .. 1376113 -  -3.8  -3.28712   GTTCGCCCGCGAGAA  CGGCCGG-GTGTTCG CCTATGTCAT CGAGCACGCCGGACG   GCACCCCGACCCCGA  47 108
CWR61_RS06615 1369687 .. 1369697 -  -8.2  -3.53091   ACCCGTTTGCCGAAA                 GCCC GGT GGGC                 GCGCAAGGGTTGATG  61 339
CWR61_RS06605 1367261 .. 1367281 -  -5.3  -2.64981   ACATGGTCAAATCCA            TCTGGCCCA GCC TGGGCAAGG            CCAATACCTCGCGGC  42 259
        cobA 1363813 .. 1363827 -  -9.2   -4.1891   CGCCCGCAAGAGAAA               CCGCCC CGA AGGCGG               TTTTTTTTCGCCATT  76 57
        queA NONE
CWR61_RS06560 1359216 .. 1359271 -   -11  -2.70932   GGCGCGGCGCAACGA GGGCCGCGCCGCGCGGGGGGGAC GGCCCGCCCTA GTCGACCCCGCGCG-CGCGGTCG GCGGCGAACCGGGCG  62 1
        yajC 1358726 .. 1358744 - -17.4  -3.65046   GGGTGAGCGGAACAA             GGCCCCGC CAC GCGGGGCC             TTGTGTGACCTTACA  93 36
        secD 1356755 .. 1356780 -  -2.5     -3.37   TGAATCCGGAAAAAT         TCCATGTTTCGC CTT GCGTATCA-GGA         CGGCGGGCGGCCCGG  45 55
        secF 1355770 .. 1355799 - -22.2  -5.08824   GCTGCATGTAAAAAA       CCCTGCCCGGCC GTATTT GGCCGGGCAGGG        TTTTTTTACGACCGG 100 50
        miaB NONE
CWR61_RS06530 NONE
        ybeY 1351571 .. 1351585 -  -2.8  -3.36837   ACAAGTTGGTAAAGA               TTCAGC ATA ACCGAA               TATTTGGCGCAAGTT  47 125
CWR61_RS06520 NONE
CWR61_RS06515 1348563 .. 1348590 -  -7.7  -3.55071   CCATACGCCGCGAAA        GCGC-CCAAGAC CTGCT GCCCTGGTGCGC        AAGCCACGACACCGG  60 452
CWR61_RS06505 1347592 .. 1347604 -  -3.3  -2.64973   ACGAAGGGGACAGGA                CGGGT ACT ACCTG                ATACTACGTTACTAC  39 58
CWR61_RS06500 1347469 .. 1347482 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CGTAACTTGCTACAC  52 55
CWR61_RS06495 1347363 .. 1347384 - -14.5  -5.63517   CCCGGAAAGAAAAAA           GCCAGTTGC GTGA GCAACTGGC            TTTCCGGAATCTTTT 100 40
CWR61_RS06490 NONE
CWR61_RS06485 1344919 .. 1344951 - -12.6  -2.76225   AATCAAGCTGAACTA     GGGGCAGGGCGCGCC GCGC GGCGCGCCC-GTCTC      TCAGGCCCGGCGCGC  65 26
CWR61_RS06440 1332921 .. 1332960 -  -7.8  -3.56092   GCACTATTTTTGAAA CGCCCGCATGGCGCCGCG ATCGCG CGCTGCGCGA-G-GGGCG  CGCGATCGCGCCGGG  63 46
CWR61_RS06435 NONE
CWR61_RS06430 1332643 .. 1332656 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CGTAACTTCTACACC  52 54
CWR61_RS06425 1332537 .. 1332558 - -14.5  -5.26875   CCGGGAAGGAAAAAA           GCCAGTTGC GTGA GCAACTGGC            TTTCCGGAATCTCTT 100 40
        bioB NONE
CWR61_RS06400 1328292 .. 1328334 - -15.7  -4.45083   GGGACAGGCACAAAA GATA-GCGGGAGCCTGTCCC CGTT GGGACAGGCTCCCGAGTATT GGAGCTACCACGGCA 100 30
CWR61_RS06385 1325044 .. 1325089 -    -6  -3.29144   CGAGGTGGTGGACAA GGCCGGCG-ATCG-CCAGGTGC TGGC GGACCTGGACGCGGCGGCGGCC TGGGCGGCCGCCAAC  52 466
        moaC NONE
CWR61_RS06365 NONE
CWR61_RS06360 NONE
        moaB NONE
CWR61_RS06350 1317788 .. 1317822 - -22.3  -3.14683   ATATCGGCGGATGAA    CGC-GGTGCCTGTCCC CGTG GGGACAGGCACCTGCG     GCGTGCCTCGGAGCC 100 311
CWR61_RS06335 NONE
CWR61_RS06330 NONE
CWR61_RS06325 NONE
        fdhD NONE
CWR61_RS06315 NONE
CWR61_RS06310 1307801 .. 1307830 -    -2  -2.71364   GGAGCGCTTCAAGGA       CCAGCCCTGGCGC GGCGT GGTCCAGG-CCGG       CATTTTTCCCATGAC  39 223
CWR61_RS06295 1306287 .. 1306315 -  -6.6  -4.56597   TGCGGCGGTGAAAAA       GGCCGCGCCATTC TACG GCA-GGCGCGGCG        GCTACTTGACCAGCG  79 27
        rhtA NONE
CWR61_RS06285 1304004 .. 1304016 -  -4.8  -4.24342   CCCGCGAGGAAGAAA                GACG GCTGA CGTC                CCGGCTCGAGAACCT  66 303
        cyoA 1301211 .. 1301240 -  -7.7  -3.96298   GAGCCATGAATGAAA       GC-CCGCGCGCGCC GGA GGCGTGCGCGCTAC       AGCACCAGGTCCTGC  70 22
        cyoB NONE
        cyoC NONE
        cyoD NONE
CWR61_RS06250 NONE
CWR61_RS06245 1296557 .. 1296590 -  -5.1   -4.1899   GGATCGGAGGGAAAA     GGGCGGC-CGCGCTCA GAC CGAGCGCGTGATGCCG     CCATCGATGCGGATG  64 4
        hutG 1295706 .. 1295760 -  -2.5  -3.14463   AAGGTGGCGCAGGAA GTCTATCGCGAGCTGGGCTAGGCGGC GCGC GCCGCCGCCCTCAGG-CGCGCCAGGC CAGCAGCGCCGCGAC  42 11
CWR61_RS06210 1291926 .. 1291938 -  -3.4   -3.4072   GATCGTGGACGACAA                CATC TACGT GATG                TTGCTGGTCGAGTCG  49 299
        chrA 1289358 .. 1289383 -  -3.8  -2.87931   CGCAGCGGCGAGATA         CTGGGCAGCC TGGACC GGCCGCGCCG          CGTCAGCCGCTGGCT  42 197
CWR61_RS06175 NONE
CWR61_RS06170 1284268 .. 1284291 -  -5.8  -3.77832   CCGTAAAGTGAAGAA          CACGGCGTAC GGTG GCGCGCCGGG           ATGGCGCGCACGCGC  60 113
CWR61_RS06165 NONE
CWR61_RS06160 NONE
CWR61_RS06155 NONE
CWR61_RS06150 1281342 .. 1281368 -  -5.7  -3.04144   TGTCCACGCGCAATA         CGCTGGTCGCG GGTTT CGTGACCGGCA         TCGCCGGTACGCTGG  48 452
CWR61_RS06140 1279750 .. 1279771 - -18.7  -4.19817   GGCATCGATGCAAAA           GGCCGGCGC CACG GCGCCGGCC            TTGTTTCACCGACCA 100 99
CWR61_RS06085 1268304 .. 1268340 -  -2.9  -3.86822   CAATTGCTGGAGAAA   CTGGAACTGCGCGCCGA GGATG TCGGCGCGC-GCGAC-G   AACGCGCCGATTGGC  56 342
CWR61_RS06075 1266439 .. 1266466 - -10.6  -2.78384   TCCTGGGCGAGGAGA        TCGCGCGCTGG GGCGCGG CC-GCGCGCGA        TGCCGGCGTGATGCC  59 60
CWR61_RS06055 1262492 .. 1262523 - -16.6  -2.62184   GTTTTGGGCACATCA      TGTCCCCGTGGCGGC AGT GCCGGC-CGGGGACA      TGGCCGGCGTCACGC  81 418
CWR61_RS06035 1259605 .. 1259636 -    -5  -3.65046   TTCGGACTGCAAGAA      GCGCGC-GCGCCTGA ACG CCATGCGCTACGTGC      TGCACAAGATGTCCT  54 119
CWR61_RS06020 1256300 .. 1256331 -  -9.3  -2.78384   GGTTCGGCCAGCATA      CCGCGCC-GGCGGC TTCAG GCGGGCGGGCGCGG      CGCGCTTCGCCGTCC  56 8
CWR61_RS06015 1255465 .. 1255488 - -13.2  -2.89475   TATTGAGACATCACA          GCTA-GCGCGC GGC GCGCGCGTAGC          GGCCGGGCGTCATGC  69 3
CWR61_RS06010 NONE
CWR61_RS06005 NONE
CWR61_RS06000 NONE
CWR61_RS05995 1250938 .. 1250957 -  -4.9  -3.53012   TGCCGGTGCTCGAAA            GCCTGTC GGGGCA GACGGGC             GAGAGCGCCGCCTAC  52 450
CWR61_RS05985 NONE
CWR61_RS05980 NONE
CWR61_RS05975 1247988 .. 1247999 -  -7.2  -3.01712   GTCCGCTGTCGAATA                CGCG GCTG CGCG                 TGTTCGACAGCATGG  52 241
CWR61_RS05965 NONE
CWR61_RS05955 NONE
CWR61_RS05950 NONE
CWR61_RS05945 NONE
         lon 1241311 .. 1241324 -  -2.3  -3.62597   TCCAGCCCGTAACAA               GCGTC ACAG GACTC                GTCCAGATGCGTACA  50 237
CWR61_RS05935 1240261 .. 1240273 - -10.5  -2.78712   CGGCGAACTGAAGTA                GCGCG GCC CGCGC                CCGCCGCCGCTCAGG  60 36
CWR61_RS05925 NONE
CWR61_RS05920 NONE
        ttrA 1234515 .. 1234542 - -17.7  -3.36749   GATGCTGAAGATCAA        GGCCGCCGCGC GCGGCA ACGCGGCGGCC         TACAGCGTGGGCCTC  87 66
CWR61_RS05885 1228587 .. 1228598 -  -7.2  -5.00616   CTGTGCCGCAAAAAA                CGCG CGCC CGCG                 ACGGGCAATTGCGAC  91 82
CWR61_RS05880 1227923 .. 1227938 - -11.8   -2.8511   CATGACACTAGGATA              GCGCGC GCCG GCGCGC               ACCCGGTTTCTTGCC  66 70
CWR61_RS05875 NONE
CWR61_RS05870 NONE
CWR61_RS05865 NONE
CWR61_RS05860 NONE
CWR61_RS05855 1224529 .. 1224560 - -18.6  -2.71011   ATTCGGGCGCAAGCA      GGCCGCCCGCGCGC GGCG GCGCGCGGGCGGTG       CGGGGGGAGGGAGGA  87 50
CWR61_RS05850 NONE
CWR61_RS05845 NONE
CWR61_RS05840 NONE
CWR61_RS05835 NONE
CWR61_RS05830 NONE
CWR61_RS05825 1218906 .. 1218947 -   -13  -3.12351   CGCGGCGAGATCGAA CGGATCTGCGC-GGCCTGA GCCGT TCAGGCCCGCGCAGCCTCG CGCGCCCCGTCCCGC  72 7
CWR61_RS05805 1216703 .. 1216754 -  -5.7  -3.29144   CGAGGTGGGCGACAA GTTCCTGG-TCG-AGGCGGGCCGGC GCAT GTCGGCCGGCCTGCGGGCCAGCGAC ACGCTGGGCCGGTGG  52 380
CWR61_RS05790 1213039 .. 1213054 - -11.8  -3.14602   GCTATGTGATGAAGA              GCGGGC TGGC GCCCGC               GCTGGTGGAGCTGGT  64 380
CWR61_RS05775 1210914 .. 1210943 -  -5.7  -3.92963   CAATAAGTACAAGAA       GT-GCTGCCTTGGC AAA GTCAAGCCAGCCAC       CAGGTGTTCTTGAAA  62 513
CWR61_RS05760 1205556 .. 1205580 -  -5.5   -3.1211   CAGCATACGAGGTAA          CCCCGCTTGCC TTC GTCGAGCGCGG          CAGCGTCCTGTACCT  47 449
CWR61_RS05750 1204254 .. 1204267 -  -9.5  -3.59979   CTTGTTGATTCGAAA               CCGCC GGCG GGCGG                CGTTCAGAAGAAACC  68 29
CWR61_RS05745 NONE
CWR61_RS05740 1201577 .. 1201590 -  -6.7  -3.53012   CGGCCTGGGCCGAAA               CGATC TTTG GATCG                TGCCGGCCGCCGCGC  57 45
CWR61_RS05725 1198920 .. 1198944 -  -3.5  -3.57144   CGGGGCAGGTGGAAA          CCGTACTCGAA GAT TTCGAACCCAG          GCCGGTGCCCATACA  51 196
CWR61_RS05715 1196875 .. 1196890 - -11.8  -3.28712   GGGCGCGCCCGAGAA              CGCGCG CGTG CGCGCG               TTCCTGGCCGACAAC  66 300
CWR61_RS05690 NONE
CWR61_RS05685 NONE
CWR61_RS05680 NONE
CWR61_RS05675 1190408 .. 1190421 -  -2.3  -3.40907   TTATAGGAATAGGAA               TGGGC AAGC GCTCA                GCGCCTGGGCGGCGG  45 23
CWR61_RS05670 1189099 .. 1189115 -  -3.5  -3.71848   TTCGGTGATGAACAA              CCTGCCC ACC GTGCTGG              TGGGGGCCCTGTCGA  55 320
CWR61_RS05655 1186064 .. 1186076 -  -4.1  -3.53343   AATTCTTTGCGCAAA                CACAA TCT TTGCG                TCATCATACCCGGAA  51 270
CWR61_RS05650 NONE
CWR61_RS05645 NONE
CWR61_RS05640 NONE
CWR61_RS05635 NONE
CWR61_RS05630 NONE
CWR61_RS05625 NONE
CWR61_RS05620 NONE
CWR61_RS05615 1166922 .. 1166973 - -20.6  -3.34192   AAGGGCGGCAAGTAA GCGGCGCCGCGTCCCGGCCCGGCG TGCG CGCCGGCCCGGGGCGCGGTTTCAC TCCTGCGCCGGCGGC 100 22
CWR61_RS05585 1161136 .. 1161155 -   -10  -3.33261   CCTGAACCGCGACAA            CGT-GGCGG TGG CCGCCGACG            CCATCGCCAGCGTGC  63 72
CWR61_RS05560 NONE
CWR61_RS05555 NONE
CWR61_RS05550 NONE
CWR61_RS05545 NONE
CWR61_RS05540 NONE
CWR61_RS05535 1150530 .. 1150552 -  -6.9  -3.35798   AGGCGTGACGCACAA           GGCCGTGGC GCGCT ACCAGGGCC           TGCTGGTCGATGCCT  52 304
CWR61_RS05525 NONE
CWR61_RS05520 1147407 .. 1147450 - -10.3  -2.70143   AGCTCAAGTACACCA CCGC-GCTGCCGGTCGACTACG CGT CGTAG-CG-CCGGCGGCCGCGC TCAGGCGGCGCGGGC  59 26
CWR61_RS05505 1144535 .. 1144558 -  -9.5  -2.94416   TATCGCCACGACATA          CTGGAGCGC GAGGCG GCGCGCCAG           CGGCTGGCGGCGCTG  57 342
        gcvA 1140958 .. 1141000 -  -4.7  -3.56092   GGAGCATCGCGCAAA GCGGCGACCT-GATGGTGGC CATG ACCATCGCCCAGGCCGCGGC GGCGCTCGCGCTGCC  55 424
CWR61_RS05470 1137904 .. 1137927 -  -8.8  -3.05384   GTGCCTGGCACCGAA          GTGCCGTCGCC TCG GGC-ACGGCCC          CAGGGTGTCAGGCAC  57 192
CWR61_RS05440 1130185 .. 1130197 -  -4.7  -2.70932   GTCGTCCTCGAATGA                TGGCG GCG CGCCG                CTCAGGAAGAAAAGC  44 27
CWR61_RS05435 NONE
CWR61_RS05430 NONE
CWR61_RS05425 1127635 .. 1127669 - -14.8  -3.53012   CGGCCGCGGGGCAAA     GCGCGAAGGCCGGGCG CGA CGGCGGGCCGCCGCGC     CGCGCCCCTTTATTT  86 63
CWR61_RS05420 NONE
CWR61_RS05370 1117442 .. 1117474 -  -3.4  -3.72695   ACCGCTGGCAGGAAA     CCCTCAG-CGGCC TGCCGTTC GACCGGCTGATGG      AGCCGGCCGAAGTGG  55 172
CWR61_RS05325 NONE
CWR61_RS05300 NONE
CWR61_RS05295 1104255 .. 1104294 - -10.8   -3.5241   CAGCGCCGAGAAACA GCTGACCAAGGCGCTGCC CAAGAT GGC-GCG-CTCGGCCAGC  GATCCCAAGCTGGCC  69 431
CWR61_RS05280 NONE
CWR61_RS05275 NONE
CWR61_RS05270 NONE
CWR61_RS05265 1098613 .. 1098635 -   -12  -3.01712   GCCCGCCGCCGAATA           GCGCTCGC GCGCCTA GCGAGCGC           GGCCGCGCGCGGTCT  68 15
CWR61_RS05250 NONE
CWR61_RS05245 NONE
CWR61_RS05240 1092240 .. 1092250 -  -2.4  -2.78384   GCGGGGCTCAGGATA                 CGGC CTT GGCG                 CGCTTGATGGTGGAG  38 7
CWR61_RS05235 1091177 .. 1091197 -  -7.5  -3.73224   GCATCTTCCAGGAAA            GCATGACCA ACG TGGCCAAGC            ACGCGCAGGCCAGCG  64 252
CWR61_RS05225 1089158 .. 1089194 -  -2.7  -2.83715   TCGACGATCAGGACA    CGGATCATGGCGGCGGC TGC GGCGGCGCTATTGCCCG    CCGCGGGGAACGTTG  40 16
CWR61_RS05220 1088312 .. 1088322 -  -2.4    -3.727   TCGAGCAGATCGAAA                 GCAC CGT GGGC                 CTGGTCGCCTCCGGC  53 242
CWR61_RS05210 NONE
CWR61_RS05205 1086021 .. 1086045 -  -3.4   -3.8698   GAAGGTAAAGCGAAA         CGG-GGTGCGC TATG GCGCGTCGCCG          GGCGCGGCGACCGGC  56 10
CWR61_RS05200 1084577 .. 1084625 -    -3  -4.07568   GGTGGTGTGGGAAAA CCTGACCGAGCCCA-TCCTGAGC GGGC GCGAGGAACTGGGCTGGGCCAAG ATCTACGCCGACCTG  58 456
CWR61_RS05110 1066224 .. 1066253 - -22.3  -2.70932   GCTCCGCGGGAATCA       TGGTGCCTGTCCC CGCC GGGACAGGCACCA        TCCTGCAGGGGCGGG 100 135
CWR61_RS05105 1065339 .. 1065351 -  -3.3  -3.13403   GGGTGCGCACCAACA                TCCGC GGC GAGGA                AGGCTATCTCTACCG  45 364
CWR61_RS05095 NONE
CWR61_RS05090 1061531 .. 1061554 - -10.2  -3.04144   GCGCCACGTTCAATA          CCGTGGCCGGC GCG GCC-GCCGCGG          GCGTGCCGTACAAGA  59 496
CWR61_RS05060 NONE
CWR61_RS05055 NONE
CWR61_RS05050 NONE
CWR61_RS05045 NONE
CWR61_RS05040 1051559 .. 1051569 -  -3.2  -2.56601   GCGATCAAAAAGGAG                 CACG CGC CATG                 TTGGGAACCATCTTG  40 219
CWR61_RS04975 1040369 .. 1040381 -  -5.5  -3.53012   CGCGCGGCCCCGAAA                CAGTG TGG CACCG                CCGGCCGCCGGCGGG  55 107
CWR61_RS04970 1039505 .. 1039528 -    -8  -2.94199   GACGCATGAATGATA          CCGTGGGCGC GCCG GCGCTCAGGG           GCGCGCCTTGCCGTC  54 20
CWR61_RS04965 1038432 .. 1038460 -  -4.5  -3.31461   CAGCCACCTGTACAA       CCTGG-CGCACT TCGCGC AGCGCGGCCTGG        TGCAGGGCCGGCCGT  49 434
CWR61_RS04940 1034160 .. 1034211 - -11.5  -3.35679   CTGGCGCAGGTATAA GGCCAGCCGCGCGCGCCAGGCCG CCGCCCCT CAGCCGGGCG-GCG-GGCCGCCC GCGCCGGTCGCGGCC  70 4
CWR61_RS04925 NONE
CWR61_RS04920 NONE
CWR61_RS04915 NONE
CWR61_RS04910 NONE
CWR61_RS04905 NONE
CWR61_RS04900 NONE
CWR61_RS04895 1025253 .. 1025273 - -19.7  -2.73364   CCGCTACCTGAAGTA            GGCCGCCCG GCG CGGGCGGCC            GCGCGTCCTTACTTG  90 34
CWR61_RS04865 1017869 .. 1017886 -  -6.3  -3.14132   CTGGTGCCGTACGAA             GT-GCTGG CCG CCAGCGAC             GGCCACGTCATCGTG  50 510
CWR61_RS04845 NONE
CWR61_RS04840 1013291 .. 1013333 -  -3.1  -3.86015   CAGCCCGGCGACAAA GAGGACCTGGCCGGCCTGCC TTTC GTCGGCCCGGCC-GGCGCGC TGCTGGACAAGGCGA  56 441
CWR61_RS04825 1010463 .. 1010492 -  -2.7  -2.87132   TGGCCGGCGGAGATA       CCTCCA-GCCTGGC CAT GCGCGGCCTGGATG       CCTACGCGTTGCGCA  40 236
CWR61_RS04800 1005449 .. 1005494 - -12.3  -3.08679   CGCGGGCACGGAAGA GGCGCGCGAAGGCGTGGCGGC GTTC GCCGCCAGGCGCGCGCCCGGC TGGGCGAAATAGGCC  69 45
CWR61_RS04785 1002228 .. 1002240 -  -9.1  -3.25823   GCTGCCGCAGATCAA                GAGCG GCG CGCTC                AAGGGATACGCGGTC  59 459
CWR61_RS04770 NONE
CWR61_RS04765 NONE
CWR61_RS04760  997948 ..  997991 - -15.3  -2.57132   CTTCGTTCCCATAAG CCATGACCCGGGCGCGC-GGC GGCG GCCTGCGCGGCCCGG-CATGG TTGGAAAGTATATCC  74 501
CWR61_RS04750 NONE
CWR61_RS04745  995951 ..  995996 -  -7.4  -3.14564   CCAGGCGGCCAGGAA GCCGGCCAGGATGGCGAGCCG GGTGA CGGC-CACCAGCGTGGCGCGC CGGGCGGGGCGCGGC  55 62
CWR61_RS04740  995181 ..  995222 -  -2.6   -2.8664   CATGGAAGGACGAGA CGCGTTGGCGAGGGCCGC GACGGG GCGGCCCGCGGTGTTGCG  GCAAGCCGGCGTCAG  40 37
CWR61_RS04735 NONE
        leuC NONE
        leuD NONE
        leuB NONE
CWR61_RS04715 NONE
CWR61_RS04710  988524 ..  988570 - -12.1  -3.14931   GGCATCTGGCAGCAA TGGCTGAACGCGGCCGGCTGCG CCGG CGC-GCTGGCCGCGCGGCGCCA GCGTTTCGACCACTT  68 289
        phnA  986456 ..  986480 - -10.8  -5.61881   TTTTAAAAAGAAAAA          GGCATTCCAC GAAAA ATGGAATGCC          TTTGCCCGGACGGCC 100 67
CWR61_RS04695 NONE
CWR61_RS04690 NONE
CWR61_RS04685 NONE
CWR61_RS04680 NONE
CWR61_RS04675  980010 ..  980029 -  -5.6  -3.25823   CGGCCTTTACACGAA            CCGCG-GCG TGG CGCTCTCGG            ATGCGGCGCGCAGTT  49 103
CWR61_RS04665 NONE
CWR61_RS04660 NONE
CWR61_RS04655 NONE
CWR61_RS04650  974450 ..  974484 -  -5.1  -6.02546   TCAAATCAAAAAAAA    CGCAGCC-GC-CATAAA TTA TTTATATGCAGGCGGCG    CGGCTTGCGGCGGGC 100 44
CWR61_RS04645  973161 ..  973171 -  -2.4  -2.94218   ATGGCGGACGAGATA                 CGTG GTT CGCG                 TTTGGGGCGGGGCGG  41 64
CWR61_RS04640 NONE
CWR61_RS04635 NONE
CWR61_RS04630  970329 ..  970349 -  -6.8  -2.75064   TGGTTGATGGAATGA            CGTCACGC ATGCG GCGTGAGG            CTTGCCGGTTCACAA  48 35
CWR61_RS04625 NONE
CWR61_RS04620 NONE
CWR61_RS04615 NONE
CWR61_RS04610  966240 ..  966279 -  -9.2  -4.30844   ATTTTACGATGAAAA  CATGACGCCAACGTGGCGC GCG GCGCCGTGCTG-CGGCATG  GCTTGCGGCCCCCAT  81 84
CWR61_RS04605  965005 ..  965028 - -14.6  -3.01712   TGCCGGCGGCGAACA          GCGCGCCGCCT CCT AGGCGGCGC-C          GGCCGCGACTTCCAG  79 14
CWR61_RS04595 NONE
CWR61_RS04590  961427 ..  961473 -  -2.9  -3.38314   CGCAAGCGGGAAAGA GCAGGTCGATCATGGCCAGGACC GGG GGTC--AGCCATTGTCGGCCAGC CAGCTTTGCGCGTGT  47 7
CWR61_RS04585 NONE
CWR61_RS04580  959537 ..  959556 - -12.1  -2.82933   GCGCAAGGCAGCAGA            CGCGGGC TTGCGC GCCCGCG             GGCCGGGCGCGCGGG  64 104
CWR61_RS04565 NONE
CWR61_RS04560 NONE
CWR61_RS04555  953636 ..  953666 - -19.6    -3.646   GCCAACGATACACAA       CCCCCGGCGCCGCG TCA CGCCGCGCCGCGGG       CCTCAGGCGTCGGCG 100 28
CWR61_RS04550  952798 ..  952808 -  -5.4  -2.65068   GAAGACATCGACAAG                 TCCA TGC TGGA                 GCAGGCCGAGGCGTA  42 292
CWR61_RS04525  947462 ..  947493 -  -5.6  -3.04144   CGTCGACGTCGAACA      CCGCCGGCGCGTAG CCCG CCTCGCACAGGCGC       CGCGCCATGTGCGCG  48 376
CWR61_RS04515  946148 ..  946169 -  -6.5  -5.14965   ATTCGTAGCAAAAAA           CCGCTGCCGC CGG GCGG-ACCGG           CGGACAGTTCGAAGG  93 95
CWR61_RS04510  945083 ..  945093 -  -8.2  -2.88544   GCCCACCTTGATAGA                 GGGC GGC GCCC                 AGGACTACGAGATCA  53 304
CWR61_RS04485 NONE
CWR61_RS04480 NONE
CWR61_RS04475  936526 ..  936537 -  -7.2  -2.78463   ACCGGGCGCACCATA                CGCG AACT CGCG                 GCCGCGATCGATATC  49 440
CWR61_RS04465  934027 ..  934046 -  -8.6  -3.68222   TGCGAATCTGAATAA            TGCGAAGC ACGC GCTTCACA             ATATGCATATAGGCA  65 139
CWR61_RS04460  932521 ..  932535 -  -2.7  -2.69151   TGGCTTCAGATACTA               CGGGG CTCAT CGCCG               CACTCCTGGCAGGAA  38 82
CWR61_RS04455 NONE
CWR61_RS04450 NONE
CWR61_RS04445 NONE
CWR61_RS04440  928675 ..  928686 -  -7.2  -3.95986   GCGAACGCAAGGAAA                GCGC GGCG GCGC                 TTGCGGCTCGGACGC  67 114
CWR61_RS04410 NONE
        groL  923096 ..  923119 - -15.2  -5.14965   AGCGCCATGAAAAAA          CCCCGCCAGG CGAA CCAGGCGGGG           TTTTTTTTCGGGAAG 100 86
CWR61_RS04395 NONE
CWR61_RS04390  918309 ..  918352 -  -3.2  -2.90392   CATGCGCCAAGTATA GAGTG-GCC-CGGC-GCGC TTGGATACG GCGCCGCCGCGGCTCAGTC CAGGACGAAGCGGCT  41 20
CWR61_RS04385 NONE
        pyrF  916108 ..  916143 - -20.4  -2.60079   GCACCCGAGAAGTCA    GCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGG     GGGGTTACGTTCTTA  91 30
CWR61_RS04345 NONE
CWR61_RS04340  909633 ..  909644 -  -3.6  -4.35044   TTATTCAAACACAAA                CGAG CCCA CCCG                 CGCACTCGGTGAAGT  66 106
        phnD NONE
        phnC NONE
        phnE NONE
        phnE  905894 ..  905914 -  -7.5  -3.59979   CCCGCCGAGCCGAAA            GCCTGGGAT AGT ACCCAAGGC            TAACCCGAAAATTGA  63 202
CWR61_RS04315  904086 ..  904132 - -12.3  -3.57462   GATGGCACCGCCAAA GGCGGCACG--CTGGCGGCCG TGGCCGC CGGCAGCCAGGGCGTGCGGCC CATCCCCGTCTACTG  74 166
        rsmD NONE
CWR61_RS04300 NONE
CWR61_RS04295 NONE
        benE  900245 ..  900271 - -12.2  -3.57144   TGCCGGATCCTGAAA         GTGCACCCCGAC ATG GCCGAGGTGCGC         TGGCCGTCGTAGGCC  77 45
CWR61_RS04275 NONE
CWR61_RS04270  896089 ..  896105 - -13.7  -4.63218   CTGTCCGGAACAAAA              GCCCTCC ACC GGAGGGC              TTTTTTCGTGGTGGC 100 50
CWR61_RS04260  894162 ..  894217 -   -27  -3.04144   GGTTGACGGCCAAGA CGGTGCCTGTCCCCGCGGGGACAGGCA CCC TGGCC-TCCCCGCGGGAACAGGCACCC TTCACAGCGCGCCCG 100 27
CWR61_RS04225  883457 ..  883490 -   -21  -2.53263   GGGATCCGGAAGGGA     GGGGGGGCGGCAGC CGTGGC GCTGCCGCCCCGCC      GTGTTACTGCGGGCG 100 29
CWR61_RS04220  882285 ..  882301 -  -3.5  -2.78384   CGCGCGGTCAGGACA              CGGCGGC GAT GGCGCTG              CGTGCGGCCTGCTCG  40 1
CWR61_RS04215 NONE
CWR61_RS04210  879496 ..  879515 -   -15  -2.86177   AGAGCGGATAGTATA            TCCCGCGC CCAT GCGCGGGA             TGCCTCATGCAGCAA  77 30
CWR61_RS04205  878697 ..  878714 -  -6.2  -3.55444   GGGCCACGCGGCAAA             CCCGCC GGATCG GGCGGA              TTTTTTCCTGCGTGC  55 48
CWR61_RS04195  876197 ..  876212 -  -6.8  -4.56775   ATGGCCGCTGAAAAA              CAAGCC GCCG GGCCTG               CATTATGAAGCCATG  79 157
CWR61_RS04190  875095 ..  875130 - -12.1  -2.52464   CGCGCGCTGAATTTA    TCATGGAATTGAATG GTTGGT CATTCAATTCCATGG     CAAGAACGTAGCTAC  64 271
CWR61_RS04185  873944 ..  873954 -  -2.4  -3.56568   GAACCACGCTCGAAA                 CGCG GAA CGGG                 CCTCTATTGCCTGAC  50 29
CWR61_RS04180  871967 ..  871987 -  -6.7  -3.83811   CAAACAGACGAAGAA            GGCTCTGCC CTG GGTAGGGCC            GGTATGCGGTCGGAG  64 279
CWR61_RS04175  870644 ..  870660 -  -5.8  -3.58343   CCCAGCAGGCTCAAA              GTCAGC CATAC GCCGAC              TGCAATTTCCTTAGA  57 138
CWR61_RS04090 NONE
CWR61_RS04085 NONE
CWR61_RS04080 NONE
CWR61_RS04075  846913 ..  846923 -  -6.8  -3.85817   ACGGTGCCGCAGAAA                 CTGG CGG CCAG                 CGCCGCCCCGCATTT  63 189
CWR61_RS04065  844613 ..  844623 -  -2.4  -4.19238   GTCTGAATCGGAAAA                 TGGC CGG GCCG                 CAATGCCCAGCGGCG  58 90
        fahA  843094 ..  843125 - -14.4  -4.67038   CCCGCAAAAGCAAAA      CGGGTGCCTGTCCC GGTT GGGACAGGCACCTT       CGTCACCCGCGGGGC 100 168
CWR61_RS04030 NONE
CWR61_RS04025  833357 ..  833384 -  -3.2  -3.53761   GAAGGCCTGCCCAAA        TCCCTGCTGGAGG CCG CCGCCTGC-GGGC        GCGCCGTGGTCACCA  51 272
CWR61_RS03970 NONE
CWR61_RS03965 NONE
CWR61_RS03960  818366 ..  818384 -  -4.4  -2.62184   CCTCGCCCGAGATCA             TGGAGCGC GTG GTGCACCA             GGTCATCCGCGAGGG  40 362
CWR61_RS03950 NONE
        mmsA  813986 ..  814012 -   -15  -3.05384   CCCTTTCTGAGTGAA         GCCGGCGGCGCC AGG GGCGCCGCCGTT         GTCGTCGGAAACGCA  80 282
CWR61_RS03940 NONE
CWR61_RS03935 NONE
CWR61_RS03930 NONE
CWR61_RS03925  808792 ..  808808 -  -2.2  -3.04792   TGATCATCGCCAACA              GCCAAC GCATG GTTTGC              TCCTTGTCGTGCACA  42 63
CWR61_RS03920  807292 ..  807306 -  -4.2  -4.66264   CAAAATGTTCAAAAA               CGGC GGAAGAT GCCG               CAAAAGCGCGGTCAA  75 45
CWR61_RS03915  805660 ..  805676 -  -9.3  -4.08216   CGAGCCCGCGCAAAA              CGGGGCG CGC CGCCGCG              AACGGGCGGCGCGCG  76 50
CWR61_RS03910  803406 ..  803426 -  -4.5  -3.70902   TGGTGGACATGGAAA            TGACCTCGC AGG GCGTGGCCT            TCAATACCGGCTACC  58 158
CWR61_RS03890  799414 ..  799433 - -16.4  -3.96148   CGCGCCCAGTAGAAA            CGCCGGCC TTCG GGCCGGCG             TTTCTACTGGGGCCT  95 256
CWR61_RS03845 NONE
CWR61_RS03840 NONE
CWR61_RS03835  787127 ..  787153 -  -5.8  -3.53012   TGCTGTTCCTCGAAA         GCGACGAAGTCT GCG AGACCTCGTATC         GCGACCGCGGCGGCA  55 89
CWR61_RS03810  779544 ..  779573 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGG GCCACGGCGGCGCT       GCGGGGGCCGGCGGG  95 50
CWR61_RS03805  777228 ..  777254 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GCG GCGGGCCGGCGG         CGCGCTCAGCGCACC 100 31
CWR61_RS03785  773861 ..  773899 -   -11  -3.30124   CGGCATCGCCTAGAA CGCGGCGCGC-CGGC-CGC TAGT GCTTGCCGCGCGCGCCG-G  CCTCGTCGGCGACTT  70 3
CWR61_RS03770 NONE
CWR61_RS03765  768954 ..  768976 -  -2.6  -4.08767   CGTATTGCGCGAAAA          CGCCGGTCC ACTATA GGGCCG-CG           GGCAGTGCCGCGGCA  58 47
CWR61_RS03760 NONE
CWR61_RS03755  767984 ..  767995 -  -7.2  -5.30616   CGAGGGAAATAAAAA                CGCC GGGA GGCG                 GTGGTTCATGTGCCA 100 112
CWR61_RS03750 NONE
CWR61_RS03745  767414 ..  767434 - -16.1  -4.52589   GCGCCGGATAGAAAA            CGGCCGCCC TGG GGGCGACCG            TCTAGGGCGCAGCGA 100 54
CWR61_RS03735  765834 ..  765848 -  -2.7  -3.86015   CATCGTCTCCACAAA               GGTGG GCCCG CCTCC               CCTCGGCTTAGCGGA  55 33
        modA  764982 ..  764992 -  -2.4  -2.61264   CTGGTCAGCGACAAG                 GGCG GGA CTCC                 TGCAAGGGGTTACAG  38 35
        modB NONE
        modC  762787 ..  762810 -  -5.2  -3.72576   TGCGGCTTTACGAAA          TGCGGCGCAGC TAC GCCGGGCC-CA          AGCCGCAGGGCAGGG  58 394
CWR61_RS03695 NONE
CWR61_RS03690 NONE
CWR61_RS03685 NONE
CWR61_RS03680 NONE
CWR61_RS03675 NONE
CWR61_RS03670 NONE
CWR61_RS03665 NONE
        mshL NONE
CWR61_RS03655  749099 ..  749117 -  -2.3  -3.53012   GGGCGTGGGCGGAAA            GGGC-GGC GTGT GCATGCCC             AGGCGCCGGTGCGCC  47 56
CWR61_RS03650 NONE
CWR61_RS03645  745861 ..  745871 -  -6.8  -3.34398   TGCCGGGGCGAAATA                 CGTC GGA GACG                 CTGCGGTGCGCCTCG  55 195
CWR61_RS03635 NONE
CWR61_RS03630 NONE
CWR61_RS03625 NONE
CWR61_RS03620  739480 ..  739525 -  -6.7  -3.28712   GTGCGGCTTCGACAA CGCCCAGCAGTTCA-GCCGC GCCTTCA GCGGCGTGTACGGCGTGGCG CCCAGCGTGCTGCGC  52 70
CWR61_RS03610  734666 ..  734708 -  -7.5  -3.75665   GCAGAGGCCATGAAA TCTTGCAGGCGCCAGTCCCC ATGC GGGGACAGGCGCCCGTG-GC GCGGGCCATTCACGG  65 35
CWR61_RS03590  730030 ..  730045 -  -7.6  -3.21695   GCATGACGAAGTCAA              CATACC ATTT GGTATG               TGATGGGTCAATCGG  57 250
CWR61_RS03585 NONE
CWR61_RS03580  727439 ..  727451 -  -9.1  -3.02511   GCGAGGCGTTCAATA                TCGCC AAC GGCGA                CGTGGTGCTGTGGCA  55 405
CWR61_RS03545 NONE
CWR61_RS03540 NONE
CWR61_RS03535 NONE
CWR61_RS03530 NONE
CWR61_RS03525 NONE
CWR61_RS03520 NONE
CWR61_RS03515 NONE
CWR61_RS03510 NONE
CWR61_RS03505  713560 ..  713585 -  -2.3  -3.34398   GGGTTTCCTGAAAGA         GTCGAACGGGC TTCA GCCGGCGCGCC          GGCCGCCGCCCACGT  45 12
CWR61_RS03500 NONE
CWR61_RS03495  711465 ..  711502 - -11.9  -3.75024   GTCGAGCAGCAAGAA   TTGACGCCGGCCGCGCCC GCC GGGCGCGG-CGCCACCAC   GCAGGAGTCCCGAAT  80 389
CWR61_RS03480 NONE
CWR61_RS03475  709190 ..  709205 -  -6.8  -3.28712   GCGCGCGGCCTAGAA              GTGCCGC TGG GCGGC-C              GGCTCGTGGGCGATG  54 4
CWR61_RS03370  687882 ..  687911 -  -4.1  -2.52516   TGGCGGACTACGAAC       TGGTCTTCCGCGTC TAT GGCGCGGGGG-CCA       CCCAGGTCTACCCGG  39 370
CWR61_RS03310  676972 ..  677006 -  -8.5  -3.33696   GTGGTGTTCAAGGAA    GCGCGCGCCCTGTCGCC CTC GGCG-CAG-GCGTTCGC    CGAATTGCTCAGGCG  59 59
        benE NONE
CWR61_RS03285  670109 ..  670122 -  -3.7  -3.41051   CGACGGGCACTACAA               CTCGC ATGT GCGCG                CCATGCGCAAGCTGT  49 345
CWR61_RS03255  663778 ..  663796 -  -2.3  -3.72576   TGCTGGTCGAGGAAA             CGCAGAA ATCCA TCCGGCG             CTTCCAGCCGGCCTG  53 523
CWR61_RS03240 NONE
CWR61_RS03235  661024 ..  661051 -  -3.3  -3.34715   CAGGCCGCCGAAATA        GAGGGCTCCGA GCAGCA TCAGTGCGCTC         CTTCGAGTTTGGCGG  47 15
CWR61_RS03230 NONE
CWR61_RS03225 NONE
CWR61_RS03220 NONE
CWR61_RS03215  656654 ..  656692 -  -7.9  -3.01712   CCGCGCCGCCGAAGA  CCCGGTGCGCGAGGCGGC GGTG GCCGACGTGCGCGC-GGG   CATCGAGCGGATCGC  52 368
CWR61_RS03125  639114 ..  639124 -  -5.4  -3.53012   TGCTTGGCGGCCAAA                 TCGT ACT ACGA                 AATCAAATAAAAAAT  53 72
CWR61_RS03120  637997 ..  638042 - -13.2  -3.01924   CATCTCGCTGGAATA GCGGCATGCGCCGTGGGCCGCG CGTG CGCGGCCCGTGGC-CGTGC-GC TCAGCCGCCCAGGCC  71 26
CWR61_RS03105  635059 ..  635071 - -10.5  -3.13382   GATGAAAGTGGAAGA                GGGCG TGG CGCCC                GGTCAGATCGATTGG  63 28
CWR61_RS03100 NONE
CWR61_RS03095  633427 ..  633464 -  -6.4  -3.76125   GTACGGCAACGGAAA  GCCGCGATGCTGCT-CGA AACA TGGTAGCAACATCGCG-C   TTTTGCGTCGATGCG  62 110
CWR61_RS03090  632225 ..  632242 -  -2.5  -3.05384   GCCCGGGGCAGGGAA             CCGGCCG ATAT CGGCGCG              TTCGCCAGGCTGATC  41 159
CWR61_RS03070 NONE
CWR61_RS03065 NONE
CWR61_RS03060 NONE
CWR61_RS03055 NONE
CWR61_RS03050  623273 ..  623289 -  -4.3  -3.82084   GGCGAAGATCAACAA              GGCCATC AAT GACGCCC              TGGCTTCGCCCGACG  58 217
CWR61_RS03020  617127 ..  617154 -  -9.9  -2.71364   CGAGGCCCTGAAGCA       GGC-CGCTGC-GC AGTG GCAGCAGCGCGCC        TGAGCGGCGAGCTCG  56 47
CWR61_RS03010 NONE
CWR61_RS03005 NONE
CWR61_RS03000  612606 ..  612639 - -12.4  -3.21276   GCGTGGTCGAGAAGA     TCGGCG-CCACCGGC TTCGT GCCGGAGGTCACCGA     CGGCGCGGCGTTCAA  68 158
CWR61_RS02975 NONE
CWR61_RS02970 NONE
CWR61_RS02965 NONE
CWR61_RS02960 NONE
        ssuE NONE
CWR61_RS02950 NONE
CWR61_RS02945 NONE
        hutG NONE
CWR61_RS02935  599836 ..  599848 -  -9.1  -3.01791   ACGGGGTGCTGAACA                TCGCC CGC GGCGA                TCGGGTCCGGATGAA  55 448
CWR61_RS02925 NONE
CWR61_RS02920  596490 ..  596501 -  -7.2  -3.03124   CGCCACGGCCGAAGA                GCGC TTTC GCGC                 GGCCGTGCTGGGACA  52 418
CWR61_RS02895  591212 ..  591267 - -15.3  -2.64472   CAGCGCGGAAATCGA GTGAGCCCCGCCCATCGCGGCGCGCC GTGCA GGAGCGCCGCGATGGG-GCAGCCCTG GGCGGCGCCGGAAGA  74 85
CWR61_RS02870  586348 ..  586372 -  -5.5  -2.87132   GCGGCGGGTCATATA          GGCGCCGCGGA CAT TGCGATGCGCC          TAACCCAGCCAGCGG  47 25
CWR61_RS02835 NONE
CWR61_RS02830  577558 ..  577568 -  -2.4  -2.79023   GAAGTCGAGGAAGCA                 TGCC GTT GGCG                 AAACACACTTATCAA  40 137
CWR61_RS02825 NONE
CWR61_RS02820  575925 ..  575949 - -15.8  -3.28712   GCGCCTGCTCGAGAA          GCTGTAGCCC TGGCC GGGCTACAGC          TGGCCGTCGAAGTCG  86 19
CWR61_RS02800 NONE
CWR61_RS02795  569032 ..  569042 -  -8.2  -2.71144   GACGGTCGTCAAGCA                 CGGC CCC GCCG                 AGGTGTTCCTCAACG  52 90
CWR61_RS02715 NONE
CWR61_RS02710  552712 ..  552738 -  -2.2  -2.71712   TCTTTCCGCTCAAAT         CGAACAAAACGG TCT CCGTTGGATTCA         GGTGCCGGACCGCGG  38 23
CWR61_RS02705 NONE
CWR61_RS02700 NONE
CWR61_RS02695 NONE
CWR61_RS02690 NONE
CWR61_RS02685 NONE
CWR61_RS02680  547449 ..  547469 - -10.3  -4.66833   GCCGAAGGCGAAAAA            GCGCGCCCG GCG CAGCCGCGC            CGCCTGAAGCCGGCG  91 52
CWR61_RS02670 NONE
CWR61_RS02665  544242 ..  544255 -  -2.3  -3.33261   TGTCAATTTGGAGAA               CATGG ATTT CCCTG                CGTGCTCAACGTTTG  45 31
CWR61_RS02660 NONE
CWR61_RS02655 NONE
CWR61_RS02650 NONE
CWR61_RS02645  540946 ..  540956 -  -2.4  -2.80816   CTGGCATTTATGACA                 CGTC CTT GTCG                 AGAAAGGAGGCAACC  40 7
CWR61_RS02640 NONE
CWR61_RS02635  538861 ..  538875 -  -5.6  -4.37199   ATGACAATCAACAAA               CGACTG ATT CAGGCG               ATTCTGGCCGGCGCG  69 433
CWR61_RS02620  535908 ..  535934 -  -3.4  -2.85999   CCAGTCGATATGAGA         TCCGGGGTGGCG GGG CGCCGCGCCTGC         GTTCAGACGCGCCGG  41 28
CWR61_RS02615 NONE
CWR61_RS02610  534224 ..  534262 -  -2.3  -3.79419   CGCGGTCAGAAAAGA  GCGTCGGTGCATGATGTC TCCT GTCATTATGGTCCG-CGC   TTGCCGGTCATGGCC  53 80
CWR61_RS02605  533119 ..  533145 -  -2.9  -3.14132   CGGTTGCGCCATGAA        GCGCAGACAGGG CGTG CCCGTTCT-CGC         CATGAGCGTCAGCTC  43 153
CWR61_RS02540  518046 ..  518087 -  -4.2  -3.63515   TTGGATGCGGAAGAA GCGG-CCGCAATCTGGGCG GAGGT CGCTCAGGCAGTGGACCGC TGGCGTGTCGTGGCC  51 245
CWR61_RS02525 NONE
CWR61_RS02520  515239 ..  515261 -  -4.8  -3.14132   CTGGGCGGGTATGAA           CAGGCATG TTTCACC CAAGCCTG           AATTTTTTGATGATT  47 108
        trmB NONE
         pip NONE
        thiS NONE
        lysM  507987 ..  508009 - -14.9  -5.86332   CCAAGGCAAAAAAAA           CGGCCAGAC TTTGC GTCTGGCCG           AATCGATCGGGGCTA 100 106
CWR61_RS02470  506594 ..  506620 -  -4.3  -4.07568   TTCGCTGCTGGAAAA         GCTGCCCGC GCAGTTCCA GCAGGCGGC         CGGCCAGCTGCAGGG  60 308
CWR61_RS02460 NONE
CWR61_RS02455 NONE
        ampD NONE
CWR61_RS02445  502469 ..  502511 -  -9.6  -2.93382   GGGGACAGGCACACA TCGCCGCGGATGCCAGCCCC TTC GGGACAGGCACACGCAGCCG TCAGTTCCCATCCGG  59 490
CWR61_RS02435  500140 ..  500156 -  -3.5  -4.28762   ACAATTTTAGGAAAA              TCCCCCG GTG CGGGGCT              TGTACTGCGAAATCT  64 74
CWR61_RS02430 NONE
CWR61_RS02425  498201 ..  498227 -  -3.6  -5.02357   TAGAACCAAAGAAAA         GACCCTTCACTC ATA GGTTGAAAGGCC         TTTCGTTTTAGAACT  81 53
CWR61_RS02400  491887 ..  491910 -  -8.8  -3.13522   ATTCGCTCAGGAAGA          CATACGGCCG AGTT CGGCCAGATG           CGGACGCTCGTAAGC  57 156
CWR61_RS02390 NONE
CWR61_RS02385  490001 ..  490035 -  -3.7  -3.56092   GCACTAGTCCCCAAA    TCCTAAATTTCTTCGT CATG ACGAAG-ACTTTGGGA     GTGCTAATGCGTCAG  53 6
CWR61_RS02380 NONE
CWR61_RS02375  486721 ..  486733 -  -3.3  -3.64703   TGCGCTCGACCCAAA                GCGGA AGT TCGGC                TATTTGATTTCAATG  51 186
CWR61_RS02370 NONE
CWR61_RS02365  484277 ..  484309 - -11.3  -3.10493   TGGCTAACAGACACA     CGGCGCCG-CGCCGC CCAAT GCGGCGGCGG-GCCA     GGCCGGGTAGGGACT  66 39
CWR61_RS02360 NONE
        betC NONE
CWR61_RS02350  480343 ..  480376 -  -9.6  -3.53811   TGTACCGGCCGGAAA     TGGAGCAGGGGCTGC TGTCG GCAACCCCTG-TCCG     CGATCCGGCGCTTAC  67 189
CWR61_RS02335 NONE
CWR61_RS02330  478202 ..  478223 -  -3.7  -4.05026   GTTAAATTGAAACAA           GCCGAC-CAA GGG CTGTGTCGAC           GCTCAAGTGTCGGCG  60 28
CWR61_RS02325  477267 ..  477282 -    -6  -3.71794   ATCGAATCATGGAAA              CCGCTG TTCG CCGCGG               CGCTTTGAGCGGCAG  60 63
CWR61_RS02295  467922 ..  467943 - -11.5  -3.30771   GCACATTCCGTACAA           GGGCAGCGC CGCG GCGCTGACC            GATGTCCTGAGCGGG  66 411
CWR61_RS02275  464169 ..  464194 -  -3.1  -4.07568   GGCCCGGGCCGAAAA         CCGCCAGGCCA TCAA TGCGCTGGTGG          CGGCGTGGAGCGCGC  58 323
CWR61_RS02195 NONE
CWR61_RS02190  439008 ..  439022 -  -2.7  -4.07568   CTGCGCCGGCGAAAA               CGGCG GCGCG CGTCG               AGCATAGCGTATTGC  58 70
CWR61_RS02185  438541 ..  438565 -   -15  -5.14563   CCGCCCATGAAAAAA         CCCCGCC-GGC GCTG GCCTGGCGGGG          TTTTTTCATGGATGG 100 51
CWR61_RS02170  436093 ..  436114 - -15.1  -3.14132   CCTGTTCTTCACCAA           GGCCACGCC TGCC GGCGCGGCC            TAGCCGCGCTTCACG  80 36
CWR61_RS02145 NONE
CWR61_RS02140 NONE
CWR61_RS02135  425322 ..  425339 - -10.5  -3.05384   CGCGGCTGGACCGAA             GCACCGG AACA CCGGCGC              CTGTCCCGACGGGGG  63 135
        thpR NONE
CWR61_RS02125 NONE
CWR61_RS02120  422191 ..  422206 -  -6.8   -3.1505   ATCATCCGCTACGAA              GGCC-CC AAG GGCGGCC              CCGGCATGCAGGAGA  50 477
CWR61_RS02105  418695 ..  418709 -  -2.7  -3.28924   GATGCGGCGCGACAA               GCCCG TCGGC CGCGC               CCTGCGCCAGGTGCT  45 95
CWR61_RS02090 NONE
CWR61_RS02085 NONE
CWR61_RS02080 NONE
CWR61_RS02075  412347 ..  412360 -  -3.7  -2.94342   GTATAAGAAAAAATT               GGTGC TCGG GCGCC                CGCGGCATGGTGTGC  44 258
CWR61_RS02065 NONE
CWR61_RS02060  410174 ..  410186 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTATCCGGATTGCCG  50 345
CWR61_RS02050  406692 ..  406706 -  -7.2  -3.19026   CAGCGCAATATTCAA               TCTCTT TTT AAGAGA               TTTCCATTGCACCGA  54 70
CWR61_RS02040  403130 ..  403173 -  -2.3  -3.87373   CAGATGGCGGACAAA TCAGGCCAAGGGAGCGTCCA TCAGG TGGGCGCGCCATC-GCGTGA TCGTGAGCTTGTACC  55 191
CWR61_RS02035 NONE
CWR61_RS02030  400541 ..  400557 -  -7.9  -3.41024   CTCCGTAAGAGAAGA              GACGGCG CGG CGGCGTC              AGTGGGTCAGGTAGC  58 24
CWR61_RS02025  399721 ..  399758 - -11.2  -3.29471   GGCCGAGCACATCAA   CCAGGCGCTGCGGCGCC GCTGA GGCGGCGC-GCGCGTGA   CGCGCGAGGGGGCGG  68 60
CWR61_RS02015 NONE
CWR61_RS02010  397399 ..  397419 - -19.7  -4.14392   CTTCAAGCGGGAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGATGGTCAG 100 37
        catC NONE
CWR61_RS02000 NONE
        pcaD NONE
CWR61_RS01990  394554 ..  394579 -  -3.9   -4.2528   GCCGAATGCAACAAA         TCGGCAACCGGC AAG ACCGG-CGACGA         GCGCAAGGCCTACAT  67 352
CWR61_RS01980 NONE
CWR61_RS01975  392708 ..  392743 -  -9.1  -3.03124   GGCCATGCGCGAACA   TGC--CCAGGCGCGC GCGCAATG GCGCGCCTGGATGCA    GGACTACGATGCGTT  55 336
CWR61_RS01960  389253 ..  389276 -    -4   -3.6943   GAGCCAAAACCATAA          CTACAGGTTAA GTA TTAACCC-TAG          TCAGCCTTGGAAAAC  56 22
CWR61_RS01955 NONE
CWR61_RS01950 NONE
CWR61_RS01945 NONE
CWR61_RS01940 NONE
CWR61_RS01935 NONE
CWR61_RS01930  383304 ..  383348 - -20.6  -2.71011   ACGTCCTGGTAAGCA CACTGGGCGGCGCCGCCGCG TCGTC CGCGGCGGCGCCGTCTCATG CCGCGGCCGGAGCCG  93 21
CWR61_RS01920  380799 ..  380833 -   -10  -3.41051   GCAGTTCGAGCAGAA    CCTGGCGCGC-TCGC TCAGCG GCGAGGCGCATCAGG     ACCCGGCGCAGCCGG  65 457
CWR61_RS01860  369817 ..  369838 - -15.9  -4.62475   ACGCACAAATGAAAA           TGCCCAGCG CAAG CGCTGGGCA            TCGAATTCGTGGTGG 100 35
CWR61_RS01840 NONE
CWR61_RS01835  366271 ..  366286 - -10.4  -3.14564   GGAGGGCGCGATGAA              CGGCTG CCCG CAGCCG               TTCATCGCGCCTTGC  63 88
CWR61_RS01760  353092 ..  353147 -  -4.4  -3.61517   ACCGTGGCGGAACAA CGGATCTGGCGCACGCTTATTGTGCA TCTG TGCACAGCGAGGGCGTGCCCGGGCCG CGCTGGCGCGGTATG  53 59
CWR61_RS01755 NONE
CWR61_RS01750  351228 ..  351257 -  -7.8  -3.62046   CGATCGCGGCAACAA       CGGCGCCAAGCCG GATAT CGGCTCGTCGC-G       CCCCTTGCTGCATAC  60 427
CWR61_RS01740 NONE
CWR61_RS01735  347670 ..  347691 -  -2.8  -3.33696   GGGGGGCGGAACGAA           CTGGCCCC GCAGGA GGTGCCTG            TTCATGACGGGGTGC  47 151
CWR61_RS01730  346529 ..  346581 -  -6.8  -4.07568   CTTGCTTCTTGAAAA TGGTTCAACCGGGCGCCG-CGCCGGC CTT GCCGGCGGCGGCGCTCAAT-ACCCCT CTACCGCGACGTGGG  68 15
CWR61_RS01725 NONE
CWR61_RS01720 NONE
CWR61_RS01715  343821 ..  343836 -  -2.4  -3.64822   ATCCGCTGATCGAAA              GCGCCG AGGG CTACGC               GCATCTGCCGGCCGT  50 486
CWR61_RS01700  341187 ..  341209 -  -4.1  -3.04144   GCGCGACCGGCAATA          CTGCCCGG CGCCATGT CCGGGC-G           CTGCCGATTGTAGAG  44 60
CWR61_RS01695  340046 ..  340065 -  -4.4  -3.25823   TGGGGTGGATATCAA            TGTATACA TGAC TATATACA             TCAATGGATATCGGC  47 163
CWR61_RS01690 NONE
CWR61_RS01685 NONE
CWR61_RS01680 NONE
CWR61_RS01675 NONE
CWR61_RS01670 NONE
CWR61_RS01665 NONE
CWR61_RS01660 NONE
CWR61_RS01655  330743 ..  330801 -  -6.6  -2.73364   TCGTCATTGTAATTA CTCCTGG-CCGG-GCGCCGGGCGG-ACCCG CGG CTGGCGCCGCGCGGCCCGCCGCTCCAGG-G TCAGGGCGTGACCAC  48 26
CWR61_RS01650 NONE
CWR61_RS01635  326765 ..  326789 -  -2.8  -3.17289   GAAAAAAGAAAACAG         GGACTG-CGCG GCGG CGTATCAGTCC          AGCTTGATGCCGAGA  45 19
CWR61_RS01630  323939 ..  323952 -  -3.1  -3.86897   CCCACGCGCGAGAAA               CTGCAG GAG CTGC-G               CGATATCCGCCTGAC  56 460
CWR61_RS01620 NONE
CWR61_RS01615  321063 ..  321074 -  -5.8  -3.01712   GTGTTGGCTTGAACA                TGCC TCAG GGCA                 TGTAGAAGCCGCCGT  48 18
CWR61_RS01610  319906 ..  319918 - -10.5  -3.21395   AGCCCTCCGAGAACA                GCCGC TGG GCGGC                GTTCTCGACGTCGGG  65 173
CWR61_RS01575  310426 ..  310451 -  -8.9  -4.39166   GGGCATATAGCAAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCACG  80 62
        rplU NONE
CWR61_RS01550  306914 ..  306935 - -17.3  -5.45802   GCCTGAAAACAAAAA           GCCCTGCCG CGTG CGGCAGGGC            TCGCCGTTCCGGGGA 100 53
        obgE NONE
CWR61_RS01540  304479 ..  304492 -  -3.8  -3.05384   CGGCGGCTCAGGTAA               CGAC CAGGTT GTCG                CGGTGCATCAGTTCC  45 4
CWR61_RS01530 NONE
CWR61_RS01525  302385 ..  302407 - -12.7  -2.54325   CTCGCTGAAATAGAG          GCGCGCGCCC GGCG GGGCGCG-GC           AGGGGCATTATTCCA  67 56
CWR61_RS01520  300082 ..  300101 -  -4.2  -3.71848   GCTGGTCAGCAAGAA            GATCCAGG CCCG CGTGGACC             TGATGCGCGGAGCTC  55 94
        thiC  295799 ..  295837 -  -5.9  -3.72893   GACTGCGCGAGGAAA  TCTCGGAGGCGCAGCGCG CCGA CGGGCCGCACCTC-AAGC   ACGATGTGTCGCTGC  61 475
CWR61_RS01470 NONE
        grxC NONE
        secB NONE
CWR61_RS01455  286776 ..  286792 -  -2.9  -3.56099   GACAAGGCGTTCAAA              CATGAAG GGA CTCCTTG              GTTTTCAGGGCAGTA  51 72
CWR61_RS01450  285586 ..  285617 - -11.5  -3.14132   GGGCCGGCCCAGCAA      CTGCGCCTGCCCA TGCGGC CGGGCCAGCGCAG       CCTCAATCTGTCCAA  64 191
CWR61_RS01435  283242 ..  283254 -  -9.1  -4.09685   GTCCATGGCGCAAAA                CTGGC GCG GCCAG                GCTGTCCAGGACACG  72 173
CWR61_RS01380 NONE
CWR61_RS01375 NONE
CWR61_RS01370 NONE
CWR61_RS01365  267129 ..  267167 - -18.9  -3.08465   AGTGACACACACACA   CCCAGGTGCCTGTCCCC GCACG GGGGACAGGCACCTGCC   GAATCCTGGGTGCCT  93 290
CWR61_RS01330  260679 ..  260693 -  -7.1  -3.25823   GCGCGCGCACAGCAA               CGGCT GCTCG AGCCG               CTGTCGCCGCGCAAC  55 129
CWR61_RS01290  251510 ..  251544 - -19.2  -3.53811   GGCACCTTGGTGAAA     GCCTGGGGAGCGCGCA TGA TGCGCGCGCCCCGGAC     GCGGCGCAAGCGCGC 100 56
CWR61_RS01285  250430 ..  250445 -    -4  -3.53012   CGGCCGGCGCCGAAA              CCAAGCA ATT TGCT-GG              TTCAGAACGAAATTT  51 85
CWR61_RS01280 NONE
CWR61_RS01275  247079 ..  247089 -  -4.6  -4.18018   GGCCGCCATGGAAAA                 GCGC GAC GCAC                 ACGAACTGCTGCGCA  66 390
CWR61_RS01260  244339 ..  244352 -  -9.5  -3.26471   CGACGCCTACAGCAA               GCGCG AGAA CGCGC                CCGAGTGGAGCGAGC  63 336
CWR61_RS01240 NONE
        rimO  239149 ..  239168 - -13.6  -3.28712   TTGGCTGCGCTACAA            GCGCCATG CCTT CATGGCGC             GCGGCTTGAGCGCCG  74 432
CWR61_RS01225 NONE
CWR61_RS01220 NONE
CWR61_RS01215 NONE
CWR61_RS01210  236206 ..  236226 - -11.8  -3.36492   GCTGGAATTGCAGAA            GGCCGGCG GCAAG CGCCAGCC            GGTAGACATCTTCGT  66 82
CWR61_RS01190 NONE
        dprA NONE
CWR61_RS01180  230398 ..  230426 -  -4.3  -3.20723   TGTTCATGAATGGAA        CGGGCGATGCGGC GAG GCCGCGTAGCATG        AGGAGGGCGTATGGG  47 130
CWR61_RS01175  229665 ..  229701 -  -4.4  -4.28254   GCTCAAGAGCGAAAA   CCCCAACATC-CGCCGCA TCC TG-GGCGTGACGCCGGGC   GCCGGCGCCAACCTG  67 237
CWR61_RS01160  226426 ..  226438 -  -4.8  -2.87132   CCCCGCCGGGACAGA                TGCC GTCCT GGCA                GTCAACGGTTCATGG  45 93
CWR61_RS01155  224938 ..  224968 -  -9.7  -3.48063   TATGGAAATCGAGAA      CGACGCCAAGGCGG CCGA CCGCC-TGGTATCG       GTCAGTTCGCCGGCC  65 362
CWR61_RS01140  222944 ..  222982 -  -6.4  -3.54424   CTCGACGGCCTGAAA   GGCTACGGCGCGGACGTC GAC GCCGCCGGCGCCCTGGAC   GAGGCCGGCTGAGCC  57 40
CWR61_RS01130 NONE
CWR61_RS01125 NONE
CWR61_RS01120 NONE
CWR61_RS01115  217243 ..  217257 -  -8.5  -3.01712   TGCCTTGTCTGAACA               CCGGG GTTGG CCCGG               TCTTTAGCCGGGTAT  56 93
CWR61_RS01110 NONE
CWR61_RS01105  214909 ..  214922 -  -2.3  -2.61004   GTACGTCGAAAAACT               CGGAC ATGG GTGCG                CACCCTCTCGTGTGC  38 87
CWR61_RS01100  213433 ..  213445 -  -9.1  -3.06796   GGCGAGCCCATGCAA                TGGCC GGC GGCCA                AGGCCATCGATCGGC  55 230
CWR61_RS01080  211461 ..  211474 -  -5.2  -3.05384   CCCGCCGTTACGCAA               GCCG GCGGCG CGGC                TACAGCGCGTCCAGG  47 25
         pap NONE
CWR61_RS01070  209463 ..  209476 -  -4.5  -2.52464   CGCGTGCTCAAGCCA               GCACC TTGC GGTAC                TGCAGGAAGCCCGAG  41 4
CWR61_RS01065 NONE
        nhaA  205609 ..  205631 -  -8.3  -3.03124   GGCGATTGCGCAACA           GGCGGCGCA GGTGG CGAGCCGCC           ATGGCTTCGTGCTGG  55 525
CWR61_RS01035 NONE
CWR61_RS01025 NONE
CWR61_RS01020 NONE
CWR61_RS01015 NONE
CWR61_RS01010  200749 ..  200759 -  -2.4  -3.27525   CGCTTTCAAATTCAA                 GCGC GGG GCGA                 AAGGAAAGAGGTCAG  44 152
CWR61_RS01005  198818 ..  198868 -  -5.1  -2.50034   CATGAAGGGAAAACG CCCGGTGGAGCGCAGCGGCGCGGG CAGG CCCGCGCCGC-ATGGTCCGGATGG TTCAGGCCTTAGCCG  43 34
CWR61_RS01000  197538 ..  197555 -  -9.1  -3.14132   TCCGGCGCGCATCAA             GCC-GGCG CTG CGCCAGGC             GCGCTTGCAGGCCCT  56 68
CWR61_RS00985  193647 ..  193660 -  -2.3   -4.1899   CCACCCTAGGGAAAA               CCCCT GGGG ACGGG                CCGCCCGGGACGGCG  58 44
CWR61_RS00980 NONE
CWR61_RS00975  190968 ..  190983 - -11.8  -5.18357   GAAGGCATGAAAAAA              GGCGGC CGCG GCCGCC               TTTTCCGGATGGACG 100 50
CWR61_RS00970  189925 ..  189943 -  -7.3  -3.53444   TTAGCGGTTGCCAAA             GGCGCGC TTAGC GCGGGCC             GAATGGGGGATTGCC  60 55
CWR61_RS00965  188720 ..  188760 - -10.4  -3.28924   GACCCTGCTGGACAA CGGCGCGCCCG-GCGTGCA TTTC TACACGCTCAACCACGCCG  AAGCCACGCTCGGCA  63 103
CWR61_RS00930 NONE
CWR61_RS00925  181146 ..  181160 -    -7  -4.11216   TTCCGACGCGGAAAA               CCCTGG GCC CCCGGG               ATGGCCGCCGTTTCA  68 38
CWR61_RS00920 NONE
CWR61_RS00915 NONE
        xerC  178395 ..  178411 -  -3.6  -3.61398   CCTGCGCGGCAACAA              CCTGCT GAACA AGCTGG              CGTTCAACCATGCGT  51 120
CWR61_RS00875  171230 ..  171258 -  -4.7   -3.3782   TATCGATGCAATGAA        TGAAGATGG GGGCGGAAATT CCATCTTCA        AGAGGGGACGGAGCG  51 75
CWR61_RS00870  169797 ..  169813 - -10.1  -2.57795   TCCACTATGAATCGA              TCCGGGC GCG GCCCGAA              TATTCGCGCCTGGCT  58 128
        dksA  169235 ..  169258 - -13.2  -5.42198   TCCGAAAAAACAAAA          GGGCTATGCC TTGG AGCATAGCCC           TGGTAATGCGTTCGG 100 76
        hslV NONE
        hslU  167222 ..  167264 - -22.7  -3.39142   GCCATATCCAAGTAA GGGCAG-GGCCGCGGCGCCC AGGC AGGCGCCGCGGCCGCCGCGC TACAGCACGTAGCGG 100 25
CWR61_RS00845  165624 ..  165640 -  -2.1  -3.05463   AGGCGCCGGACTCAA              CCCGCCA GTG TCGCGGC              GTCCTCGATATCGAA  42 5
CWR61_RS00840 NONE
        rfbB NONE
        rfbD NONE
        rfbC  162355 ..  162392 -  -9.9  -3.17075   CCGGCGTCAACTGAA  GGCGTACGGGCCGCTAC GCATAG GTATCGGCCCG--CGCC   AGCGCCACGCCCTGG  60 1
CWR61_RS00770 NONE
CWR61_RS00765 NONE
CWR61_RS00760  151609 ..  151642 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATC GCGGCGGGGGCGGCG      CTGCGCGCGCCCGAC  52 204
CWR61_RS00740 NONE
CWR61_RS00735  146652 ..  146662 -  -2.4   -2.5919   GACCAGATCAACTCA                 GGGC CTG GCGC                 AGCGCGGCAACAATC  38 7
CWR61_RS00730 NONE
CWR61_RS00725  144270 ..  144289 -  -8.6  -3.11272   GAGGATGATCGAATA            GTCCA-GGC CGG GCCGTGGAC            GCGCCGTCTCAGGTA  57 34
CWR61_RS00720 NONE
CWR61_RS00715 NONE
CWR61_RS00710 NONE
CWR61_RS00705 NONE
CWR61_RS00700  137693 ..  137717 -  -3.5  -3.02649   AGTCCAGGACAGAGA          TCATTTCGCTC CTC GTGCGAAGTAA          TACGACATGAAAAGG  42 1
        hisH NONE
        hisF  135976 ..  135988 -  -6.3  -3.95073   GTCGATATTCACAAA                GTTCT TCC AGAAC                TATTATCTGCCGACG  63 340
CWR61_RS00665  131037 ..  131051 -  -2.8   -2.6162   GAACCCCGCAAATAC               CGCA CATATAT TGCG               CTCCTAGCGATCAGA  39 29
        asnB  129076 ..  129113 -  -6.1  -3.76224   TGGGCAGGGACGAAA   CGAGGTCAGCCCGCCGCC CGA GGTAGCGAGC-GAGCGCG   TCGAGTGCGTGGGGC  60 66
CWR61_RS00655 NONE
CWR61_RS00650 NONE
CWR61_RS00645 NONE
CWR61_RS00640  124297 ..  124308 -  -2.2  -3.84514   AGCCTAATTAGGAAA                GCGT CCAT ACAC                 CTCGATGACACGGTC  55 2
CWR61_RS00635 NONE
CWR61_RS00630 NONE
CWR61_RS00625  120695 ..  120720 -  -3.3  -2.60075   CGGGGTGGAAGGAAT         CCATTGGGCATC GGC AATGCGCA-TGG         CAGTCTCCTTATCCG  39 115
CWR61_RS00620  120111 ..  120121 -  -3.2  -2.71364   TCATGCTCTCAAGCA                 TAGC ATT GCCA                 ACCTAGGGAAAACAC  40 53
CWR61_RS00615 NONE
CWR61_RS00610  117770 ..  117790 - -10.4  -3.18264   GGCGGTACTGACTAA           CCGGC-CGC CGTG GCGCGCCGG            GCGCCCACCAGGCCC  65 1
CWR61_RS00570 NONE
CWR61_RS00565  106923 ..  106936 -  -8.1  -3.94877   ACTGGTCAACAACAA               GCACC CGCT GGTGC                CGATGTCGACCTTGC  67 142
CWR61_RS00530   99315 ..   99334 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TCGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CWR61_RS00525   98251 ..   98265 -  -2.8  -3.02043   AATTCGCCCGCAAGA               TCCC ATCAGTG GGGA               GTTGGGCACGCGTCA  42 102
CWR61_RS00520   97621 ..   97653 - -18.5  -5.47218   GCGGAGGCAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTGCGGCTGCG 100 61
CWR61_RS00515   95876 ..   95904 -  -7.4  -3.53012   GCGCCCTGCTCGAAA       GCGAATCGGC-CC GGCT GGCGGCGATCCGC        GGCACCGATGCCGAC  58 433
CWR61_RS00505   93081 ..   93139 - -9.89999  -4.57569   CGATCGTGCGAAAAA TGGCAGCC-TGGCAGGCCGGCGCCCGCC GACA GGCGGGCGCCGGGCGGCTTCAGCGGCGG GCCGCCTTGAAGGCT  86 16
CWR61_RS00500   92420 ..   92436 - -15.1  -5.53288   TTTAATCGAAAAAAA              CCGGCGC CCG GCGCCGG              ACCGCGGCTGCGTTC 100 39
CWR61_RS00495   92154 ..   92192 -  -2.3  -4.07687   AGCGGGGCTGGAAAA  GTAACCTGCCGGG-GGAC AGAT GCCGTCCTGGCAGGCTAG   CGTTCATGGCGTAGC  58 86
CWR61_RS00445   80732 ..   80762 -  -7.6  -2.80816   CGGTCATCCACCAGA      CGCGCGTCACCGGC TTCGG GCCGGTG-CG-GCA      CCAGGAGGCGGCCGC  49 440
        uvrA   70524 ..   70555 -  -3.6  -4.87803   CAGGCGGAAAGAAAA      GGGGGCGG-ACGG TTCGTGT CCGTGCCGCCCTA      GTCTAGCGCTGTTTG  78 28
CWR61_RS00400   69662 ..   69685 -  -5.3  -3.53012   GGCGGCTGTTCGAAA          TGGGCTGAAG GGCGG CCTC-GCCCA          TGCGGCCTACCCCAA  53 183
CWR61_RS00380   63953 ..   63967 -  -5.6  -3.12668   GATGTCGATATCGAA               GCCACC CGC AGCGGC               AATGTGCTGACGCTG  47 298
CWR61_RS00370 NONE
        lysA   62297 ..   62326 - -22.3  -3.53012   CGTCGTGCCCCCAAA       GACAATGCCCCGC GGAT GCGGGGCATTGTC        TTTGGGGGCGCCGCC 100 50
CWR61_RS00345 NONE
        hemB   55932 ..   55948 -  -3.5  -3.06133   CAACCTGCTATGGAA              TGCCGGC ATC GCCCGCC              TGGGCATGAGCCGGG  43 234
CWR61_RS00320   52111 ..   52144 - -16.7  -2.73124   CGGCAGCGCGGAAAG     CGGCAAGGGCGGGTC TTCG GACCCGCCCTTGCTT      TTTGCGGCCCGCCCG  81 107
CWR61_RS00220   40176 ..   40196 - -15.4  -4.72272   GCCGGCCACGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCTTGAGCCCGG 100 50
CWR61_RS00215   39099 ..   39121 - -17.8  -3.72576   CGTTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTTTGTTTATC  93 175
CWR61_RS00135 NONE
CWR61_RS00130   27033 ..   27051 -    -8   -3.1917   AGGAAGAGGAAGAGA             GCGCCCCG CAA CGGGGTAC             CGACGAGGGTTGGGA  57 356
CWR61_RS00120 NONE
CWR61_RS00115 NONE
CWR61_RS00110   21692 ..   21729 - -15.6  -2.53876   CGGGATGGCAATGCA   GGCAGCGCCGCCGCCAC ATCGA ATGAC-GCGGCGCCGCC   GGCGCCTGGCACGCA  69 375
CWR61_RS00100   20119 ..   20142 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GTGA ATCAGCGGCC           TTTTGCTTGATGCCG 100 51
