CAL11_RS00035	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS00075	PWY-6654	phosphopantothenate biosynthesis III
CAL11_RS00095	PWY-6167	flavin biosynthesis II (archaea)
CAL11_RS00095	PWY-6168	flavin biosynthesis III (fungi)
CAL11_RS00115	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS00115	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS00115	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS00115	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CAL11_RS00115	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CAL11_RS00115	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CAL11_RS00115	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS00185	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS00210	PWY-4381	fatty acid biosynthesis initiation I
CAL11_RS00210	PWY-5743	3-hydroxypropanoate cycle
CAL11_RS00210	PWY-5744	glyoxylate assimilation
CAL11_RS00210	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS00210	PWY-6679	jadomycin biosynthesis
CAL11_RS00210	PWY-6722	candicidin biosynthesis
CAL11_RS00210	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAL11_RS00245	PWY-6936	seleno-amino acid biosynthesis
CAL11_RS00325	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS00330	PWY-6871	3-methylbutanol biosynthesis
CAL11_RS00550	PWY-5350	thiosulfate disproportionation III (rhodanese)
CAL11_RS00615	PWY-3781	aerobic respiration I (cytochrome c)
CAL11_RS00615	PWY-6692	Fe(II) oxidation
CAL11_RS00615	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
CAL11_RS00615	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAL11_RS00705	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS00705	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS00775	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAL11_RS00775	PWY-3162	L-tryptophan degradation V (side chain pathway)
CAL11_RS00775	PWY-5057	L-valine degradation II
CAL11_RS00775	PWY-5076	L-leucine degradation III
CAL11_RS00775	PWY-5078	L-isoleucine degradation II
CAL11_RS00775	PWY-5079	L-phenylalanine degradation III
CAL11_RS00775	PWY-5082	L-methionine degradation III
CAL11_RS00775	PWY-5480	pyruvate fermentation to ethanol I
CAL11_RS00775	PWY-5486	pyruvate fermentation to ethanol II
CAL11_RS00775	PWY-5751	phenylethanol biosynthesis
CAL11_RS00775	PWY-6313	serotonin degradation
CAL11_RS00775	PWY-6333	acetaldehyde biosynthesis I
CAL11_RS00775	PWY-6342	noradrenaline and adrenaline degradation
CAL11_RS00775	PWY-6454	vancomycin resistance I
CAL11_RS00775	PWY-6587	pyruvate fermentation to ethanol III
CAL11_RS00775	PWY-6802	salidroside biosynthesis
CAL11_RS00775	PWY-6871	3-methylbutanol biosynthesis
CAL11_RS00775	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS00775	PWY-7013	L-1,2-propanediol degradation
CAL11_RS00775	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS00775	PWY-7118	chitin degradation to ethanol
CAL11_RS00775	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CAL11_RS00780	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAL11_RS00815	PWY-3781	aerobic respiration I (cytochrome c)
CAL11_RS00815	PWY-4521	arsenite oxidation I (respiratory)
CAL11_RS00815	PWY-6692	Fe(II) oxidation
CAL11_RS00815	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAL11_RS00880	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CAL11_RS00880	PWY-5667	CDP-diacylglycerol biosynthesis I
CAL11_RS00880	PWY-6453	stigma estolide biosynthesis
CAL11_RS00880	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CAL11_RS00880	PWY-7587	oleate biosynthesis III (cyanobacteria)
CAL11_RS00890	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
CAL11_RS00915	PWY-6749	CMP-legionaminate biosynthesis I
CAL11_RS00940	PWY-5392	reductive TCA cycle II
CAL11_RS00940	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS00940	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS00940	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS00940	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS00940	PWY-6728	methylaspartate cycle
CAL11_RS00940	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS00940	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS00970	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS00990	PWY-6454	vancomycin resistance I
CAL11_RS00990	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS01230	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CAL11_RS01380	PWY-5392	reductive TCA cycle II
CAL11_RS01380	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS01380	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS01380	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS01380	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS01380	PWY-6728	methylaspartate cycle
CAL11_RS01380	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS01380	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS01450	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CAL11_RS01450	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CAL11_RS01490	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS01490	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS01490	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS01490	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS01490	PWY-5723	Rubisco shunt
CAL11_RS01490	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS01490	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS01490	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS01490	PWY-7003	glycerol degradation to butanol
CAL11_RS01490	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS01490	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS01540	PWY-7425	2-chloroacrylate degradation I
CAL11_RS01555	PWY-3781	aerobic respiration I (cytochrome c)
CAL11_RS01555	PWY-4521	arsenite oxidation I (respiratory)
CAL11_RS01555	PWY-6692	Fe(II) oxidation
CAL11_RS01555	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAL11_RS01570	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS01570	PWY-181	photorespiration
CAL11_RS01570	PWY-2161	folate polyglutamylation
CAL11_RS01570	PWY-2201	folate transformations I
CAL11_RS01570	PWY-3661	glycine betaine degradation I
CAL11_RS01570	PWY-3661-1	glycine betaine degradation II (mammalian)
CAL11_RS01570	PWY-3841	folate transformations II
CAL11_RS01570	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS01605	PWY-6832	2-aminoethylphosphonate degradation II
CAL11_RS01825	PWY-5958	acridone alkaloid biosynthesis
CAL11_RS01825	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CAL11_RS01825	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CAL11_RS01830	PWY-5958	acridone alkaloid biosynthesis
CAL11_RS01830	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CAL11_RS01830	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CAL11_RS01835	PWY-181	photorespiration
CAL11_RS01840	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAL11_RS01840	PWY-5723	Rubisco shunt
CAL11_RS01875	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CAL11_RS01875	PWY-6148	tetrahydromethanopterin biosynthesis
CAL11_RS01875	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CAL11_RS01875	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CAL11_RS01925	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS01935	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS01950	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CAL11_RS01950	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CAL11_RS02030	PWY-723	alkylnitronates degradation
CAL11_RS02050	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS02050	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS02050	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS02050	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS02050	PWY-5177	glutaryl-CoA degradation
CAL11_RS02050	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS02050	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS02050	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS02050	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS02050	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS02050	PWY-6944	androstenedione degradation
CAL11_RS02050	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS02050	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS02050	PWY-7007	methyl ketone biosynthesis
CAL11_RS02050	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS02050	PWY-7094	fatty acid salvage
CAL11_RS02050	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS02050	PWY-735	jasmonic acid biosynthesis
CAL11_RS02050	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS02050	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS02050	PWY-7726	CAL11_RS02050
CAL11_RS02095	PWY-5331	taurine biosynthesis
CAL11_RS02100	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS02140	PWY-6654	phosphopantothenate biosynthesis III
CAL11_RS02165	PWY-6840	homoglutathione biosynthesis
CAL11_RS02165	PWY-7255	ergothioneine biosynthesis I (bacteria)
CAL11_RS02195	PWY-5344	L-homocysteine biosynthesis
CAL11_RS02215	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS02215	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS02300	PWY-5686	UMP biosynthesis
CAL11_RS02310	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS02365	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS02365	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS02385	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CAL11_RS02395	PWY-2201	folate transformations I
CAL11_RS02455	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAL11_RS02455	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CAL11_RS02485	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
CAL11_RS02500	PWY-6605	adenine and adenosine salvage II
CAL11_RS02500	PWY-6610	adenine and adenosine salvage IV
CAL11_RS02630	PWY-5839	menaquinol-7 biosynthesis
CAL11_RS02630	PWY-5844	menaquinol-9 biosynthesis
CAL11_RS02630	PWY-5849	menaquinol-6 biosynthesis
CAL11_RS02630	PWY-5890	menaquinol-10 biosynthesis
CAL11_RS02630	PWY-5891	menaquinol-11 biosynthesis
CAL11_RS02630	PWY-5892	menaquinol-12 biosynthesis
CAL11_RS02630	PWY-5895	menaquinol-13 biosynthesis
CAL11_RS02670	PWY-6910	hydroxymethylpyrimidine salvage
CAL11_RS02670	PWY-7356	thiamin salvage IV (yeast)
CAL11_RS02670	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CAL11_RS02675	PWY-6891	thiazole biosynthesis II (Bacillus)
CAL11_RS02675	PWY-6892	thiazole biosynthesis I (E. coli)
CAL11_RS02690	PWY-2201	folate transformations I
CAL11_RS02690	PWY-3841	folate transformations II
CAL11_RS02760	PWY-4261	glycerol degradation I
CAL11_RS02830	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CAL11_RS02830	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CAL11_RS02830	PWY-6897	thiamin salvage II
CAL11_RS02830	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CAL11_RS02830	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CAL11_RS02830	PWY-7356	thiamin salvage IV (yeast)
CAL11_RS02830	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CAL11_RS02840	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS02925	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAL11_RS02930	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CAL11_RS02930	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CAL11_RS02930	PWY-6897	thiamin salvage II
CAL11_RS02930	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CAL11_RS02930	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CAL11_RS02930	PWY-7356	thiamin salvage IV (yeast)
CAL11_RS02930	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CAL11_RS02955	PWY-5686	UMP biosynthesis
CAL11_RS02985	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAL11_RS03015	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAL11_RS03015	PWY-6416	quinate degradation II
CAL11_RS03015	PWY-6707	gallate biosynthesis
CAL11_RS03085	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAL11_RS03085	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS03085	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAL11_RS03085	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAL11_RS03085	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS03085	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS03085	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS03085	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CAL11_RS03090	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAL11_RS03090	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS03090	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAL11_RS03090	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAL11_RS03090	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS03090	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS03090	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS03090	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CAL11_RS03115	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAL11_RS03120	PWY-5392	reductive TCA cycle II
CAL11_RS03120	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS03120	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS03120	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS03120	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS03120	PWY-6728	methylaspartate cycle
CAL11_RS03120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS03120	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS03195	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS03195	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS03230	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS03230	PWY-181	photorespiration
CAL11_RS03230	PWY-2161	folate polyglutamylation
CAL11_RS03230	PWY-2201	folate transformations I
CAL11_RS03230	PWY-3661	glycine betaine degradation I
CAL11_RS03230	PWY-3661-1	glycine betaine degradation II (mammalian)
CAL11_RS03230	PWY-3841	folate transformations II
CAL11_RS03230	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS03250	PWY-5525	D-glucuronate degradation I
CAL11_RS03285	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS03285	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS03285	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS03285	PWY-5087	L-glutamate degradation VI (to pyruvate)
CAL11_RS03285	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS03285	PWY-5723	Rubisco shunt
CAL11_RS03285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS03285	PWY-6728	methylaspartate cycle
CAL11_RS03285	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS03285	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS03285	PWY-7003	glycerol degradation to butanol
CAL11_RS03285	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS03285	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS03305	PWY-5704	urea degradation II
CAL11_RS03315	PWY-5704	urea degradation II
CAL11_RS03320	PWY-5704	urea degradation II
CAL11_RS03355	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CAL11_RS03355	PWY-7494	choline degradation IV
CAL11_RS03430	PWY-5381	pyridine nucleotide cycling (plants)
CAL11_RS03440	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS03500	PWY-5316	nicotine biosynthesis
CAL11_RS03500	PWY-5381	pyridine nucleotide cycling (plants)
CAL11_RS03500	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CAL11_RS03500	PWY-7342	superpathway of nicotine biosynthesis
CAL11_RS03520	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CAL11_RS03520	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CAL11_RS03520	PWY-5989	stearate biosynthesis II (bacteria and plants)
CAL11_RS03520	PWY-6113	superpathway of mycolate biosynthesis
CAL11_RS03520	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CAL11_RS03520	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAL11_RS03520	PWY-7663	gondoate biosynthesis (anaerobic)
CAL11_RS03520	PWY-7664	oleate biosynthesis IV (anaerobic)
CAL11_RS03520	PWYG-321	mycolate biosynthesis
CAL11_RS03530	PWY-5386	methylglyoxal degradation I
CAL11_RS03725	PWY-4041	&gamma;-glutamyl cycle
CAL11_RS03725	PWY-5826	hypoglycin biosynthesis
CAL11_RS03825	PWY-4041	&gamma;-glutamyl cycle
CAL11_RS03825	PWY-5826	hypoglycin biosynthesis
CAL11_RS03865	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS03865	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS03865	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS03865	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS03930	PWY-5686	UMP biosynthesis
CAL11_RS03950	PWY-2201	folate transformations I
CAL11_RS03965	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS03965	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS03970	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAL11_RS03970	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CAL11_RS03970	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAL11_RS03975	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS03975	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS03985	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAL11_RS03985	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CAL11_RS03985	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CAL11_RS03985	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAL11_RS03990	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS03990	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS03995	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS03995	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS04015	PWY-2201	folate transformations I
CAL11_RS04015	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS04045	PWY-5331	taurine biosynthesis
CAL11_RS04105	PWY-2301	<i>myo</i>-inositol biosynthesis
CAL11_RS04105	PWY-4702	phytate degradation I
CAL11_RS04105	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
CAL11_RS04300	PWY-6562	norspermidine biosynthesis
CAL11_RS04335	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS04355	PWY-7158	L-phenylalanine degradation V
CAL11_RS04395	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS04395	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS04395	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS04395	PWY-5723	Rubisco shunt
CAL11_RS04395	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS04395	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS04395	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS04395	PWY-7003	glycerol degradation to butanol
CAL11_RS04395	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS04395	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS04415	PWY-5386	methylglyoxal degradation I
CAL11_RS04480	PWY-5392	reductive TCA cycle II
CAL11_RS04480	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CAL11_RS04480	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS04480	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS04480	PWY-6728	methylaspartate cycle
CAL11_RS04480	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS04480	PWY-7254	TCA cycle VII (acetate-producers)
CAL11_RS04480	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS04565	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CAL11_RS04565	PWY-6148	tetrahydromethanopterin biosynthesis
CAL11_RS04565	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CAL11_RS04565	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CAL11_RS04585	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAL11_RS04585	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CAL11_RS04585	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CAL11_RS04590	PWY-2781	<i>cis</i>-zeatin biosynthesis
CAL11_RS04615	PWY-5392	reductive TCA cycle II
CAL11_RS04615	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CAL11_RS04615	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS04615	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS04615	PWY-6728	methylaspartate cycle
CAL11_RS04615	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS04615	PWY-7254	TCA cycle VII (acetate-producers)
CAL11_RS04615	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS04635	PWY-4041	&gamma;-glutamyl cycle
CAL11_RS04635	PWY-5826	hypoglycin biosynthesis
CAL11_RS04660	PWY-2201	folate transformations I
CAL11_RS04660	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS04675	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CAL11_RS04675	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CAL11_RS04725	PWY-5958	acridone alkaloid biosynthesis
CAL11_RS04725	PWY-6543	4-aminobenzoate biosynthesis
CAL11_RS04725	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CAL11_RS04725	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CAL11_RS04740	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS04740	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
CAL11_RS04740	PWY-7242	D-fructuronate degradation
CAL11_RS04740	PWY-7310	D-glucosaminate degradation
CAL11_RS04740	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
CAL11_RS04795	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS04840	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAL11_RS04900	PWY-6123	inosine-5'-phosphate biosynthesis I
CAL11_RS04900	PWY-6124	inosine-5'-phosphate biosynthesis II
CAL11_RS04900	PWY-7234	inosine-5'-phosphate biosynthesis III
CAL11_RS04950	PWY-3801	sucrose degradation II (sucrose synthase)
CAL11_RS04950	PWY-6527	stachyose degradation
CAL11_RS04950	PWY-7238	sucrose biosynthesis II
CAL11_RS04950	PWY-7343	UDP-glucose biosynthesis
CAL11_RS04980	PWY-5057	L-valine degradation II
CAL11_RS04980	PWY-5076	L-leucine degradation III
CAL11_RS04980	PWY-5078	L-isoleucine degradation II
CAL11_RS04980	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS04980	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS04980	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS04980	PWY-5108	L-isoleucine biosynthesis V
CAL11_RS05030	PWY-5686	UMP biosynthesis
CAL11_RS05090	PWY-4041	&gamma;-glutamyl cycle
CAL11_RS05090	PWY-5826	hypoglycin biosynthesis
CAL11_RS05095	PWY-5692	allantoin degradation to glyoxylate II
CAL11_RS05095	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
CAL11_RS05160	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS05160	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS05165	PWY-2941	L-lysine biosynthesis II
CAL11_RS05165	PWY-2942	L-lysine biosynthesis III
CAL11_RS05165	PWY-5097	L-lysine biosynthesis VI
CAL11_RS05185	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CAL11_RS05185	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CAL11_RS05185	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CAL11_RS05265	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS05265	PWY-6549	L-glutamine biosynthesis III
CAL11_RS05265	PWY-6728	methylaspartate cycle
CAL11_RS05265	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS05265	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS05265	PWY-7254	TCA cycle VII (acetate-producers)
CAL11_RS05265	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CAL11_RS05385	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS05395	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CAL11_RS05485	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS05485	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS05485	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS05485	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CAL11_RS05485	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CAL11_RS05485	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CAL11_RS05485	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS05490	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS05490	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS05490	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS05490	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CAL11_RS05490	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CAL11_RS05490	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CAL11_RS05490	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS05495	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS05495	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS05500	PWY-5669	phosphatidylethanolamine biosynthesis I
CAL11_RS05550	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS05550	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS05550	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS05550	PWY-7003	glycerol degradation to butanol
CAL11_RS05580	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS05580	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS05580	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS05580	PWY-5087	L-glutamate degradation VI (to pyruvate)
CAL11_RS05580	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS05580	PWY-5723	Rubisco shunt
CAL11_RS05580	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS05580	PWY-6728	methylaspartate cycle
CAL11_RS05580	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS05580	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS05580	PWY-7003	glycerol degradation to butanol
CAL11_RS05580	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS05580	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS05595	PWY-4983	L-citrulline-nitric oxide cycle
CAL11_RS05595	PWY-4984	urea cycle
CAL11_RS05595	PWY-5	canavanine biosynthesis
CAL11_RS05595	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS05595	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS05660	PWY-6936	seleno-amino acid biosynthesis
CAL11_RS05745	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CAL11_RS05745	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CAL11_RS05745	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CAL11_RS05900	PWY-7560	methylerythritol phosphate pathway II
CAL11_RS05905	PWY-7560	methylerythritol phosphate pathway II
CAL11_RS05940	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CAL11_RS05940	PWY-5368	dimorphecolate biosynthesis
CAL11_RS05940	PWY-5995	linoleate biosynthesis I (plants)
CAL11_RS05940	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CAL11_RS05940	PWY-6803	phosphatidylcholine acyl editing
CAL11_RS05940	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CAL11_RS05940	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CAL11_RS05940	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CAL11_RS05940	PWY-7470	phosphatidylcholine biosynthesis VII
CAL11_RS05940	PWY-7618	ricinoleate biosynthesis
CAL11_RS06085	PWY-5381	pyridine nucleotide cycling (plants)
CAL11_RS06115	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS06130	PWY-4381	fatty acid biosynthesis initiation I
CAL11_RS06130	PWY-5743	3-hydroxypropanoate cycle
CAL11_RS06130	PWY-5744	glyoxylate assimilation
CAL11_RS06130	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS06130	PWY-6679	jadomycin biosynthesis
CAL11_RS06130	PWY-6722	candicidin biosynthesis
CAL11_RS06130	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAL11_RS06175	PWY-2201	folate transformations I
CAL11_RS06200	PWY-4381	fatty acid biosynthesis initiation I
CAL11_RS06205	PWY-4381	fatty acid biosynthesis initiation I
CAL11_RS06205	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CAL11_RS06205	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAL11_RS06210	PWY-5367	petroselinate biosynthesis
CAL11_RS06210	PWY-5515	L-arabinose degradation II
CAL11_RS06210	PWY-5525	D-glucuronate degradation I
CAL11_RS06210	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CAL11_RS06210	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CAL11_RS06210	PWY-5989	stearate biosynthesis II (bacteria and plants)
CAL11_RS06210	PWY-5994	palmitate biosynthesis I (animals and fungi)
CAL11_RS06210	PWY-6113	superpathway of mycolate biosynthesis
CAL11_RS06210	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CAL11_RS06210	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAL11_RS06210	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAL11_RS06210	PWY-7663	gondoate biosynthesis (anaerobic)
CAL11_RS06210	PWY-7664	oleate biosynthesis IV (anaerobic)
CAL11_RS06210	PWYG-321	mycolate biosynthesis
CAL11_RS06330	PWY-5642	2,4-dinitrotoluene degradation
CAL11_RS06330	PWY-6373	acrylate degradation
CAL11_RS06350	PWY-3941	&beta;-alanine biosynthesis II
CAL11_RS06350	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS06350	PWY-5747	2-methylcitrate cycle II
CAL11_RS06350	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CAL11_RS06350	PWY-7118	chitin degradation to ethanol
CAL11_RS06365	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CAL11_RS06365	PWY-7118	chitin degradation to ethanol
CAL11_RS06445	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS06460	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CAL11_RS06460	PWY-7177	UTP and CTP dephosphorylation II
CAL11_RS06460	PWY-7185	UTP and CTP dephosphorylation I
CAL11_RS06465	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAL11_RS06465	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CAL11_RS06475	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS06475	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS06475	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS06475	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS06475	PWY-5723	Rubisco shunt
CAL11_RS06475	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS06475	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS06475	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS06475	PWY-7003	glycerol degradation to butanol
CAL11_RS06475	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS06475	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS06540	PWY-6825	phosphatidylcholine biosynthesis V
CAL11_RS06570	PWY-5747	2-methylcitrate cycle II
CAL11_RS06575	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS06575	PWY-5392	reductive TCA cycle II
CAL11_RS06575	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CAL11_RS06575	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS06575	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS06575	PWY-6728	methylaspartate cycle
CAL11_RS06575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS06575	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CAL11_RS06575	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS06595	PWY-3781	aerobic respiration I (cytochrome c)
CAL11_RS06595	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CAL11_RS06595	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CAL11_RS06595	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS06595	PWY-6728	methylaspartate cycle
CAL11_RS06595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS06595	PWY-7254	TCA cycle VII (acetate-producers)
CAL11_RS06595	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAL11_RS06600	PWY-3781	aerobic respiration I (cytochrome c)
CAL11_RS06600	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CAL11_RS06600	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CAL11_RS06600	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS06600	PWY-6728	methylaspartate cycle
CAL11_RS06600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS06600	PWY-7254	TCA cycle VII (acetate-producers)
CAL11_RS06600	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAL11_RS06630	PWY-1281	sulfoacetaldehyde degradation I
CAL11_RS06630	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CAL11_RS06630	PWY-5482	pyruvate fermentation to acetate II
CAL11_RS06630	PWY-5485	pyruvate fermentation to acetate IV
CAL11_RS06630	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS06630	PWY-6637	sulfolactate degradation II
CAL11_RS06630	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CAL11_RS06635	PWY-6891	thiazole biosynthesis II (Bacillus)
CAL11_RS06635	PWY-6892	thiazole biosynthesis I (E. coli)
CAL11_RS06635	PWY-7560	methylerythritol phosphate pathway II
CAL11_RS06650	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CAL11_RS06655	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CAL11_RS06660	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CAL11_RS06660	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CAL11_RS06760	PWY-5676	acetyl-CoA fermentation to butanoate II
CAL11_RS06760	PWY-5741	ethylmalonyl-CoA pathway
CAL11_RS06760	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS06810	PWY-7052	cyanophycin metabolism
CAL11_RS06815	PWY-7052	cyanophycin metabolism
CAL11_RS06990	PWY-181	photorespiration
CAL11_RS06995	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CAL11_RS06995	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CAL11_RS06995	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CAL11_RS06995	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CAL11_RS06995	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
CAL11_RS06995	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
CAL11_RS06995	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
CAL11_RS06995	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CAL11_RS06995	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CAL11_RS06995	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
CAL11_RS07015	PWY-3461	L-tyrosine biosynthesis II
CAL11_RS07015	PWY-3462	L-phenylalanine biosynthesis II
CAL11_RS07015	PWY-6120	L-tyrosine biosynthesis III
CAL11_RS07015	PWY-6627	salinosporamide A biosynthesis
CAL11_RS07015	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CAL11_RS07015	PWY-7626	bacilysin biosynthesis
CAL11_RS07020	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CAL11_RS07025	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAL11_RS07030	PWY-7205	CMP phosphorylation
CAL11_RS07070	PWY-6936	seleno-amino acid biosynthesis
CAL11_RS07130	PWY-5278	sulfite oxidation III
CAL11_RS07130	PWY-5340	sulfate activation for sulfonation
CAL11_RS07130	PWY-6683	sulfate reduction III (assimilatory)
CAL11_RS07130	PWY-6932	selenate reduction
CAL11_RS07135	PWY-5278	sulfite oxidation III
CAL11_RS07135	PWY-5340	sulfate activation for sulfonation
CAL11_RS07135	PWY-6683	sulfate reduction III (assimilatory)
CAL11_RS07135	PWY-6932	selenate reduction
CAL11_RS07185	PWY-6938	NADH repair
CAL11_RS07195	PWY-5176	coumarin biosynthesis (via 2-coumarate)
CAL11_RS07235	PWY-1341	phenylacetate degradation II (anaerobic)
CAL11_RS07235	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CAL11_RS07235	PWY-7716	CAL11_RS07235
CAL11_RS07285	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CAL11_RS07285	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
CAL11_RS07335	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAL11_RS07335	PWY-5723	Rubisco shunt
CAL11_RS07355	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS07440	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CAL11_RS07495	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS07495	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS07495	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS07495	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS07495	PWY-5177	glutaryl-CoA degradation
CAL11_RS07495	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS07495	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS07495	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS07495	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS07495	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS07495	PWY-6944	androstenedione degradation
CAL11_RS07495	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS07495	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS07495	PWY-7007	methyl ketone biosynthesis
CAL11_RS07495	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS07495	PWY-7094	fatty acid salvage
CAL11_RS07495	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS07495	PWY-735	jasmonic acid biosynthesis
CAL11_RS07495	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS07495	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS07495	PWY-7726	CAL11_RS07495
CAL11_RS07500	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS07510	PWY-3341	L-proline biosynthesis III
CAL11_RS07510	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CAL11_RS07625	PWY-6854	ethylene biosynthesis III (microbes)
CAL11_RS07680	PWY-6012	acyl carrier protein metabolism I
CAL11_RS07680	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CAL11_RS07685	PWY-6902	chitin degradation II
CAL11_RS07695	PWY-5269	cardiolipin biosynthesis II
CAL11_RS07695	PWY-5668	cardiolipin biosynthesis I
CAL11_RS07705	PWY-6700	queuosine biosynthesis
CAL11_RS07710	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS07730	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CAL11_RS07740	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAL11_RS07740	PWY-6578	8-amino-7-oxononanoate biosynthesis III
CAL11_RS07740	PWY-7147	8-amino-7-oxononanoate biosynthesis II
CAL11_RS07760	PWY-3781	aerobic respiration I (cytochrome c)
CAL11_RS07760	PWY-4521	arsenite oxidation I (respiratory)
CAL11_RS07760	PWY-6692	Fe(II) oxidation
CAL11_RS07760	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAL11_RS08050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS08110	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CAL11_RS08110	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CAL11_RS08110	PWY-7717	CAL11_RS08110
CAL11_RS08110	PWY-7733	CAL11_RS08110
CAL11_RS08110	PWY-7734	CAL11_RS08110
CAL11_RS08265	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS08325	PWY-6409	pyoverdine I biosynthesis
CAL11_RS08325	PWY-6562	norspermidine biosynthesis
CAL11_RS08325	PWY-761	rhizobactin 1021 biosynthesis
CAL11_RS08330	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAL11_RS08330	PWY-6416	quinate degradation II
CAL11_RS08330	PWY-6707	gallate biosynthesis
CAL11_RS08350	PWY-7294	xylose degradation IV
CAL11_RS08350	PWY-7295	L-arabinose degradation IV
CAL11_RS08365	PWY-5155	&beta;-alanine biosynthesis III
CAL11_RS08420	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS08490	PWY-6829	tRNA methylation (yeast)
CAL11_RS08490	PWY-7285	methylwyosine biosynthesis
CAL11_RS08490	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CAL11_RS08525	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAL11_RS08525	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CAL11_RS08525	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS08525	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS08525	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CAL11_RS08525	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAL11_RS08525	PWY-7205	CMP phosphorylation
CAL11_RS08525	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAL11_RS08525	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS08525	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS08525	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS08525	PWY-7224	purine deoxyribonucleosides salvage
CAL11_RS08525	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS08525	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CAL11_RS08530	PWY-2201	folate transformations I
CAL11_RS08595	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS09075	PWY-6703	preQ<sub>0</sub> biosynthesis
CAL11_RS09125	PWY-4261	glycerol degradation I
CAL11_RS09125	PWY-6118	glycerol-3-phosphate shuttle
CAL11_RS09125	PWY-6952	glycerophosphodiester degradation
CAL11_RS09315	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CAL11_RS09315	PWY-5368	dimorphecolate biosynthesis
CAL11_RS09315	PWY-5995	linoleate biosynthesis I (plants)
CAL11_RS09315	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CAL11_RS09315	PWY-6803	phosphatidylcholine acyl editing
CAL11_RS09315	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CAL11_RS09315	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CAL11_RS09315	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CAL11_RS09315	PWY-7470	phosphatidylcholine biosynthesis VII
CAL11_RS09315	PWY-7618	ricinoleate biosynthesis
CAL11_RS09325	PWY-5381	pyridine nucleotide cycling (plants)
CAL11_RS09325	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CAL11_RS09325	PWY-6596	adenosine nucleotides degradation I
CAL11_RS09325	PWY-6606	guanosine nucleotides degradation II
CAL11_RS09325	PWY-6607	guanosine nucleotides degradation I
CAL11_RS09325	PWY-6608	guanosine nucleotides degradation III
CAL11_RS09325	PWY-7185	UTP and CTP dephosphorylation I
CAL11_RS09435	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS09570	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS09595	PWY-6617	adenosine nucleotides degradation III
CAL11_RS09645	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CAL11_RS09655	PWY-381	nitrate reduction II (assimilatory)
CAL11_RS09655	PWY-5675	nitrate reduction V (assimilatory)
CAL11_RS09655	PWY-6549	L-glutamine biosynthesis III
CAL11_RS09655	PWY-6963	ammonia assimilation cycle I
CAL11_RS09655	PWY-6964	ammonia assimilation cycle II
CAL11_RS09745	PWY-5642	2,4-dinitrotoluene degradation
CAL11_RS09745	PWY-6373	acrylate degradation
CAL11_RS09870	PWY-3341	L-proline biosynthesis III
CAL11_RS09870	PWY-4981	L-proline biosynthesis II (from arginine)
CAL11_RS09870	PWY-6344	L-ornithine degradation II (Stickland reaction)
CAL11_RS09905	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS09905	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS09960	PWY-5669	phosphatidylethanolamine biosynthesis I
CAL11_RS10020	PWY-4202	arsenate detoxification I (glutaredoxin)
CAL11_RS10020	PWY-4621	arsenate detoxification II (glutaredoxin)
CAL11_RS10080	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS10085	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CAL11_RS10085	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CAL11_RS10095	PWY-2661	trehalose biosynthesis V
CAL11_RS10100	PWY-5941	glycogen degradation II (eukaryotic)
CAL11_RS10100	PWY-6724	starch degradation II
CAL11_RS10100	PWY-6737	starch degradation V
CAL11_RS10100	PWY-7238	sucrose biosynthesis II
CAL11_RS10105	PWY-2661	trehalose biosynthesis V
CAL11_RS10105	PWY-6902	chitin degradation II
CAL11_RS10115	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CAL11_RS10115	PWY-622	starch biosynthesis
CAL11_RS10120	PWY-2622	trehalose biosynthesis IV
CAL11_RS10130	PWY-622	starch biosynthesis
CAL11_RS10390	PWY-5392	reductive TCA cycle II
CAL11_RS10390	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS10390	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS10390	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS10390	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS10390	PWY-6728	methylaspartate cycle
CAL11_RS10390	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS10390	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS10435	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS10435	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS10435	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS10435	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS10435	PWY-5723	Rubisco shunt
CAL11_RS10435	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS10435	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS10435	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS10435	PWY-7003	glycerol degradation to butanol
CAL11_RS10435	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS10435	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS10440	PWY-6654	phosphopantothenate biosynthesis III
CAL11_RS10660	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS10660	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS10660	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS10660	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS10660	PWY-5177	glutaryl-CoA degradation
CAL11_RS10660	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS10660	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS10660	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS10660	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS10660	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS10660	PWY-6944	androstenedione degradation
CAL11_RS10660	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS10660	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS10660	PWY-7007	methyl ketone biosynthesis
CAL11_RS10660	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS10660	PWY-7094	fatty acid salvage
CAL11_RS10660	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS10660	PWY-735	jasmonic acid biosynthesis
CAL11_RS10660	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS10660	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS10660	PWY-7726	CAL11_RS10660
CAL11_RS11000	PWY-4381	fatty acid biosynthesis initiation I
CAL11_RS11000	PWY-5743	3-hydroxypropanoate cycle
CAL11_RS11000	PWY-5744	glyoxylate assimilation
CAL11_RS11000	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS11000	PWY-6679	jadomycin biosynthesis
CAL11_RS11000	PWY-6722	candicidin biosynthesis
CAL11_RS11000	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAL11_RS11035	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS11035	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS11035	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS11035	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS11035	PWY-5723	Rubisco shunt
CAL11_RS11035	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS11035	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS11035	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS11035	PWY-7003	glycerol degradation to butanol
CAL11_RS11035	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS11035	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS11165	PWY-4321	L-glutamate degradation IV
CAL11_RS11270	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAL11_RS11270	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS11270	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS11270	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CAL11_RS11270	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAL11_RS11270	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAL11_RS11345	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS11365	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CAL11_RS11365	PWY-622	starch biosynthesis
CAL11_RS11375	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CAL11_RS11375	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CAL11_RS11375	PWY-5989	stearate biosynthesis II (bacteria and plants)
CAL11_RS11375	PWY-5994	palmitate biosynthesis I (animals and fungi)
CAL11_RS11375	PWY-6113	superpathway of mycolate biosynthesis
CAL11_RS11375	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CAL11_RS11375	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAL11_RS11375	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAL11_RS11375	PWY-7663	gondoate biosynthesis (anaerobic)
CAL11_RS11375	PWY-7664	oleate biosynthesis IV (anaerobic)
CAL11_RS11375	PWYG-321	mycolate biosynthesis
CAL11_RS11400	PWY-7294	xylose degradation IV
CAL11_RS11400	PWY-7295	L-arabinose degradation IV
CAL11_RS11400	PWY-7560	methylerythritol phosphate pathway II
CAL11_RS11405	PWY-5667	CDP-diacylglycerol biosynthesis I
CAL11_RS11405	PWY-5981	CDP-diacylglycerol biosynthesis III
CAL11_RS11455	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAL11_RS11455	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CAL11_RS11455	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CAL11_RS11455	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CAL11_RS11470	PWY-2161	folate polyglutamylation
CAL11_RS11530	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS11755	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CAL11_RS11755	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CAL11_RS11765	PWY-6891	thiazole biosynthesis II (Bacillus)
CAL11_RS11765	PWY-6892	thiazole biosynthesis I (E. coli)
CAL11_RS11765	PWY-7560	methylerythritol phosphate pathway II
CAL11_RS11780	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CAL11_RS11780	PWY-2201	folate transformations I
CAL11_RS11780	PWY-3841	folate transformations II
CAL11_RS11780	PWY-5030	L-histidine degradation III
CAL11_RS11780	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS11780	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CAL11_RS11825	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
CAL11_RS11825	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CAL11_RS11825	PWY-6148	tetrahydromethanopterin biosynthesis
CAL11_RS11865	PWY-4041	&gamma;-glutamyl cycle
CAL11_RS11865	PWY-5826	hypoglycin biosynthesis
CAL11_RS11900	PWY-5381	pyridine nucleotide cycling (plants)
CAL11_RS11900	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CAL11_RS11910	PWY-4983	L-citrulline-nitric oxide cycle
CAL11_RS11910	PWY-4984	urea cycle
CAL11_RS11910	PWY-5	canavanine biosynthesis
CAL11_RS11910	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS11910	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS11985	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS12130	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS12130	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS12130	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS12130	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS12130	PWY-5723	Rubisco shunt
CAL11_RS12130	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS12130	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS12130	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS12130	PWY-7003	glycerol degradation to butanol
CAL11_RS12130	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS12130	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS12155	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CAL11_RS12155	PWY-7494	choline degradation IV
CAL11_RS12165	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS12165	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS12165	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS12165	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS12180	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS12180	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS12180	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS12180	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS12220	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS12220	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS12220	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS12220	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS12220	PWY-5177	glutaryl-CoA degradation
CAL11_RS12220	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS12220	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS12220	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS12220	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS12220	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS12220	PWY-6944	androstenedione degradation
CAL11_RS12220	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS12220	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS12220	PWY-7007	methyl ketone biosynthesis
CAL11_RS12220	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS12220	PWY-7094	fatty acid salvage
CAL11_RS12220	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS12220	PWY-735	jasmonic acid biosynthesis
CAL11_RS12220	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS12220	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS12220	PWY-7726	CAL11_RS12220
CAL11_RS12240	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS12280	PWY-5028	L-histidine degradation II
CAL11_RS12280	PWY-5030	L-histidine degradation III
CAL11_RS12350	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAL11_RS12350	PWY-6164	3-dehydroquinate biosynthesis I
CAL11_RS12350	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CAL11_RS12355	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CAL11_RS12355	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CAL11_RS12415	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAL11_RS12575	PWY-3341	L-proline biosynthesis III
CAL11_RS12575	PWY-4981	L-proline biosynthesis II (from arginine)
CAL11_RS12575	PWY-6344	L-ornithine degradation II (Stickland reaction)
CAL11_RS12905	PWY-6614	tetrahydrofolate biosynthesis
CAL11_RS12910	PWY-6749	CMP-legionaminate biosynthesis I
CAL11_RS13010	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS13015	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CAL11_RS13015	PWY-6596	adenosine nucleotides degradation I
CAL11_RS13015	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS13090	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAL11_RS13090	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CAL11_RS13090	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CAL11_RS13260	PWY-6823	molybdenum cofactor biosynthesis
CAL11_RS13260	PWY-6891	thiazole biosynthesis II (Bacillus)
CAL11_RS13260	PWY-6892	thiazole biosynthesis I (E. coli)
CAL11_RS13260	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CAL11_RS13280	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS13280	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CAL11_RS13280	PWY-6638	sulfolactate degradation III
CAL11_RS13280	PWY-6642	(<i>R</i>)-cysteate degradation
CAL11_RS13280	PWY-6643	coenzyme M biosynthesis II
CAL11_RS13280	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CAL11_RS13280	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CAL11_RS13280	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS13470	PWY-6825	phosphatidylcholine biosynthesis V
CAL11_RS13475	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAL11_RS13475	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CAL11_RS13480	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CAL11_RS13480	PWY-6167	flavin biosynthesis II (archaea)
CAL11_RS13480	PWY-6168	flavin biosynthesis III (fungi)
CAL11_RS13525	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CAL11_RS13525	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS13525	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS13525	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CAL11_RS13675	PWY-2941	L-lysine biosynthesis II
CAL11_RS13675	PWY-2942	L-lysine biosynthesis III
CAL11_RS13675	PWY-5097	L-lysine biosynthesis VI
CAL11_RS13675	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS13675	PWY-6559	spermidine biosynthesis II
CAL11_RS13675	PWY-6562	norspermidine biosynthesis
CAL11_RS13675	PWY-7153	grixazone biosynthesis
CAL11_RS13675	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS13680	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CAL11_RS13770	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CAL11_RS13770	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CAL11_RS13775	PWY-6823	molybdenum cofactor biosynthesis
CAL11_RS13790	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAL11_RS13835	PWY-702	L-methionine biosynthesis II
CAL11_RS13920	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAL11_RS13920	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CAL11_RS13925	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAL11_RS13925	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CAL11_RS13940	PWY-5392	reductive TCA cycle II
CAL11_RS13940	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS13940	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS13940	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS13940	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS13940	PWY-6728	methylaspartate cycle
CAL11_RS13940	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS13940	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS13945	PWY-5392	reductive TCA cycle II
CAL11_RS13945	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS13945	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS13945	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS13945	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS13945	PWY-6728	methylaspartate cycle
CAL11_RS13945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS13945	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS13955	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CAL11_RS13955	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CAL11_RS13955	PWY-6936	seleno-amino acid biosynthesis
CAL11_RS13955	PWY-702	L-methionine biosynthesis II
CAL11_RS14050	PWY-5686	UMP biosynthesis
CAL11_RS14235	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CAL11_RS14235	PWY-6853	ethylene biosynthesis II (microbes)
CAL11_RS14235	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CAL11_RS14285	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS14285	PWY-2361	3-oxoadipate degradation
CAL11_RS14285	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CAL11_RS14295	PWY-6854	ethylene biosynthesis III (microbes)
CAL11_RS14325	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAL11_RS14330	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS14365	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS14365	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS14365	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS14365	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS14415	PWY-4981	L-proline biosynthesis II (from arginine)
CAL11_RS14415	PWY-4984	urea cycle
CAL11_RS14415	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS14420	PWY-4983	L-citrulline-nitric oxide cycle
CAL11_RS14420	PWY-4984	urea cycle
CAL11_RS14420	PWY-5	canavanine biosynthesis
CAL11_RS14420	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS14420	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS14535	PWY-7255	ergothioneine biosynthesis I (bacteria)
CAL11_RS14610	PWY-6123	inosine-5'-phosphate biosynthesis I
CAL11_RS14610	PWY-6124	inosine-5'-phosphate biosynthesis II
CAL11_RS14610	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS14610	PWY-7234	inosine-5'-phosphate biosynthesis III
CAL11_RS14700	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CAL11_RS14700	PWY-6164	3-dehydroquinate biosynthesis I
CAL11_RS14700	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CAL11_RS14730	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS14770	PWY-7294	xylose degradation IV
CAL11_RS14770	PWY-7295	L-arabinose degradation IV
CAL11_RS14810	PWY-5663	tetrahydrobiopterin biosynthesis I
CAL11_RS14810	PWY-5664	tetrahydrobiopterin biosynthesis II
CAL11_RS14810	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CAL11_RS14810	PWY-6703	preQ<sub>0</sub> biosynthesis
CAL11_RS14810	PWY-6983	tetrahydrobiopterin biosynthesis III
CAL11_RS14810	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CAL11_RS14815	PWY-6891	thiazole biosynthesis II (Bacillus)
CAL11_RS14815	PWY-6892	thiazole biosynthesis I (E. coli)
CAL11_RS14815	PWY-7560	methylerythritol phosphate pathway II
CAL11_RS15035	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CAL11_RS15035	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CAL11_RS15035	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CAL11_RS15040	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CAL11_RS15040	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CAL11_RS15045	PWY-5381	pyridine nucleotide cycling (plants)
CAL11_RS15045	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CAL11_RS15055	PWY-6825	phosphatidylcholine biosynthesis V
CAL11_RS15160	PWY-5747	2-methylcitrate cycle II
CAL11_RS15175	PWY-7425	2-chloroacrylate degradation I
CAL11_RS15420	PWY-3801	sucrose degradation II (sucrose synthase)
CAL11_RS15420	PWY-5054	sorbitol biosynthesis I
CAL11_RS15420	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CAL11_RS15420	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CAL11_RS15420	PWY-5659	GDP-mannose biosynthesis
CAL11_RS15420	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS15420	PWY-621	sucrose degradation III (sucrose invertase)
CAL11_RS15420	PWY-622	starch biosynthesis
CAL11_RS15420	PWY-6981	chitin biosynthesis
CAL11_RS15420	PWY-6992	1,5-anhydrofructose degradation
CAL11_RS15420	PWY-7238	sucrose biosynthesis II
CAL11_RS15420	PWY-7347	sucrose biosynthesis III
CAL11_RS15420	PWY-7385	1,3-propanediol biosynthesis (engineered)
CAL11_RS15425	PWY-6749	CMP-legionaminate biosynthesis I
CAL11_RS15455	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS15455	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS15455	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS15455	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS15455	PWY-5177	glutaryl-CoA degradation
CAL11_RS15455	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS15455	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS15455	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS15455	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS15455	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS15455	PWY-6944	androstenedione degradation
CAL11_RS15455	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS15455	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS15455	PWY-7007	methyl ketone biosynthesis
CAL11_RS15455	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS15455	PWY-7094	fatty acid salvage
CAL11_RS15455	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS15455	PWY-735	jasmonic acid biosynthesis
CAL11_RS15455	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS15455	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS15455	PWY-7726	CAL11_RS15455
CAL11_RS15465	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS15465	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS15465	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS15465	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS15465	PWY-5177	glutaryl-CoA degradation
CAL11_RS15465	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS15465	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS15465	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS15465	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS15465	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS15465	PWY-6944	androstenedione degradation
CAL11_RS15465	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS15465	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS15465	PWY-7007	methyl ketone biosynthesis
CAL11_RS15465	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS15465	PWY-7094	fatty acid salvage
CAL11_RS15465	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS15465	PWY-735	jasmonic acid biosynthesis
CAL11_RS15465	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS15465	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS15465	PWY-7726	CAL11_RS15465
CAL11_RS15515	PWY-5033	nicotinate degradation II
CAL11_RS15515	PWY-6993	nicotine degradation II (pyrrolidine pathway)
CAL11_RS15515	PWY-7128	nicotine degradation III (VPP pathway)
CAL11_RS15515	PWY-722	nicotinate degradation I
CAL11_RS15625	PWY-5392	reductive TCA cycle II
CAL11_RS15625	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS15625	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS15625	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS15625	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS15625	PWY-6728	methylaspartate cycle
CAL11_RS15625	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS15625	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS15710	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS15710	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS15710	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS15710	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS15710	PWY-5177	glutaryl-CoA degradation
CAL11_RS15710	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS15710	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS15710	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS15710	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS15710	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS15710	PWY-6944	androstenedione degradation
CAL11_RS15710	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS15710	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS15710	PWY-7007	methyl ketone biosynthesis
CAL11_RS15710	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS15710	PWY-7094	fatty acid salvage
CAL11_RS15710	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS15710	PWY-735	jasmonic acid biosynthesis
CAL11_RS15710	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS15710	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS15710	PWY-7726	CAL11_RS15710
CAL11_RS15735	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS15735	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS15735	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CAL11_RS15735	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS15735	PWY-5723	Rubisco shunt
CAL11_RS15735	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS15735	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS15735	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS15735	PWY-7003	glycerol degradation to butanol
CAL11_RS15735	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS15735	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CAL11_RS15750	PWY-2941	L-lysine biosynthesis II
CAL11_RS15750	PWY-2942	L-lysine biosynthesis III
CAL11_RS15750	PWY-5097	L-lysine biosynthesis VI
CAL11_RS15750	PWY-6559	spermidine biosynthesis II
CAL11_RS15750	PWY-6562	norspermidine biosynthesis
CAL11_RS15750	PWY-7153	grixazone biosynthesis
CAL11_RS15760	PWY-4381	fatty acid biosynthesis initiation I
CAL11_RS15760	PWY-5743	3-hydroxypropanoate cycle
CAL11_RS15760	PWY-5744	glyoxylate assimilation
CAL11_RS15760	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS15760	PWY-6679	jadomycin biosynthesis
CAL11_RS15760	PWY-6722	candicidin biosynthesis
CAL11_RS15760	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAL11_RS15790	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CAL11_RS15800	PWY-2301	<i>myo</i>-inositol biosynthesis
CAL11_RS15800	PWY-4702	phytate degradation I
CAL11_RS15800	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
CAL11_RS15805	PWY-6004	glycine betaine biosynthesis V (from glycine)
CAL11_RS15885	PWY-2941	L-lysine biosynthesis II
CAL11_RS15885	PWY-2942	L-lysine biosynthesis III
CAL11_RS15885	PWY-5097	L-lysine biosynthesis VI
CAL11_RS15950	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS15970	PWY-6840	homoglutathione biosynthesis
CAL11_RS15970	PWY-7255	ergothioneine biosynthesis I (bacteria)
CAL11_RS16030	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS16185	PWY-4041	&gamma;-glutamyl cycle
CAL11_RS16185	PWY-5826	hypoglycin biosynthesis
CAL11_RS16295	PWY-5392	reductive TCA cycle II
CAL11_RS16295	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS16295	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS16295	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS16295	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS16295	PWY-6728	methylaspartate cycle
CAL11_RS16295	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS16295	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS16310	PWY-4381	fatty acid biosynthesis initiation I
CAL11_RS16310	PWY-5743	3-hydroxypropanoate cycle
CAL11_RS16310	PWY-5744	glyoxylate assimilation
CAL11_RS16310	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS16310	PWY-6679	jadomycin biosynthesis
CAL11_RS16310	PWY-6722	candicidin biosynthesis
CAL11_RS16310	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CAL11_RS16370	PWY-6803	phosphatidylcholine acyl editing
CAL11_RS16370	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CAL11_RS16370	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CAL11_RS16370	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CAL11_RS16470	PWY-6936	seleno-amino acid biosynthesis
CAL11_RS16515	PWY-3801	sucrose degradation II (sucrose synthase)
CAL11_RS16515	PWY-6527	stachyose degradation
CAL11_RS16515	PWY-7238	sucrose biosynthesis II
CAL11_RS16515	PWY-7343	UDP-glucose biosynthesis
CAL11_RS16540	PWY-2201	folate transformations I
CAL11_RS16540	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS16540	PWY-6167	flavin biosynthesis II (archaea)
CAL11_RS16550	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS16550	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS16665	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS16715	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS16715	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS16715	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS16715	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS16715	PWY-5177	glutaryl-CoA degradation
CAL11_RS16715	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS16715	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS16715	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS16715	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS16715	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS16715	PWY-6944	androstenedione degradation
CAL11_RS16715	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS16715	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS16715	PWY-7007	methyl ketone biosynthesis
CAL11_RS16715	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS16715	PWY-7094	fatty acid salvage
CAL11_RS16715	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS16715	PWY-735	jasmonic acid biosynthesis
CAL11_RS16715	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS16715	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS16715	PWY-7726	CAL11_RS16715
CAL11_RS16825	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CAL11_RS16825	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS16825	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CAL11_RS16825	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CAL11_RS16840	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
CAL11_RS16880	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS16880	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS16880	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS16880	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS16880	PWY-5177	glutaryl-CoA degradation
CAL11_RS16880	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS16880	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS16880	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS16880	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS16880	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS16880	PWY-6944	androstenedione degradation
CAL11_RS16880	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS16880	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS16880	PWY-7007	methyl ketone biosynthesis
CAL11_RS16880	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS16880	PWY-7094	fatty acid salvage
CAL11_RS16880	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS16880	PWY-735	jasmonic acid biosynthesis
CAL11_RS16880	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS16880	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS16880	PWY-7726	CAL11_RS16880
CAL11_RS16930	PWY-6749	CMP-legionaminate biosynthesis I
CAL11_RS16935	PWY-6614	tetrahydrofolate biosynthesis
CAL11_RS17005	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS17005	PWY-5686	UMP biosynthesis
CAL11_RS17005	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS17010	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CAL11_RS17010	PWY-5686	UMP biosynthesis
CAL11_RS17010	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CAL11_RS17015	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAL11_RS17015	PWY-5723	Rubisco shunt
CAL11_RS17170	PWY-6123	inosine-5'-phosphate biosynthesis I
CAL11_RS17170	PWY-7234	inosine-5'-phosphate biosynthesis III
CAL11_RS17190	PWY-6123	inosine-5'-phosphate biosynthesis I
CAL11_RS17190	PWY-6124	inosine-5'-phosphate biosynthesis II
CAL11_RS17190	PWY-7234	inosine-5'-phosphate biosynthesis III
CAL11_RS17195	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAL11_RS17200	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS17200	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAL11_RS17200	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS17200	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS17200	PWY-7385	1,3-propanediol biosynthesis (engineered)
CAL11_RS17230	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CAL11_RS17310	PWY-1281	sulfoacetaldehyde degradation I
CAL11_RS17310	PWY-5482	pyruvate fermentation to acetate II
CAL11_RS17310	PWY-5485	pyruvate fermentation to acetate IV
CAL11_RS17310	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS17310	PWY-6637	sulfolactate degradation II
CAL11_RS17315	PWY-5482	pyruvate fermentation to acetate II
CAL11_RS17315	PWY-5485	pyruvate fermentation to acetate IV
CAL11_RS17315	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS17320	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CAL11_RS17320	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CAL11_RS17320	PWY-5989	stearate biosynthesis II (bacteria and plants)
CAL11_RS17320	PWY-6113	superpathway of mycolate biosynthesis
CAL11_RS17320	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CAL11_RS17320	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAL11_RS17320	PWY-7663	gondoate biosynthesis (anaerobic)
CAL11_RS17320	PWY-7664	oleate biosynthesis IV (anaerobic)
CAL11_RS17320	PWYG-321	mycolate biosynthesis
CAL11_RS17325	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS17325	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS17325	PWY-6886	1-butanol autotrophic biosynthesis
CAL11_RS17325	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS17325	PWY-7003	glycerol degradation to butanol
CAL11_RS17330	PWY-1042	glycolysis IV (plant cytosol)
CAL11_RS17330	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS17330	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS17330	PWY-7003	glycerol degradation to butanol
CAL11_RS17335	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CAL11_RS17335	PWY-5723	Rubisco shunt
CAL11_RS17335	PWY-6891	thiazole biosynthesis II (Bacillus)
CAL11_RS17335	PWY-6892	thiazole biosynthesis I (E. coli)
CAL11_RS17335	PWY-6901	superpathway of glucose and xylose degradation
CAL11_RS17335	PWY-7560	methylerythritol phosphate pathway II
CAL11_RS17340	PWY-2201	folate transformations I
CAL11_RS17355	PWY-1281	sulfoacetaldehyde degradation I
CAL11_RS17355	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CAL11_RS17355	PWY-5482	pyruvate fermentation to acetate II
CAL11_RS17355	PWY-5485	pyruvate fermentation to acetate IV
CAL11_RS17355	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS17355	PWY-6637	sulfolactate degradation II
CAL11_RS17355	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CAL11_RS17375	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CAL11_RS17375	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CAL11_RS17375	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CAL11_RS17375	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CAL11_RS17375	PWY-6978	plastoquinol-9 biosynthesis II
CAL11_RS17400	PWY-5194	siroheme biosynthesis
CAL11_RS17400	PWY-5441	S-methyl-L-methionine cycle
CAL11_RS17400	PWY-702	L-methionine biosynthesis II
CAL11_RS17400	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CAL11_RS17405	PWY-7183	pyrimidine nucleobases salvage I
CAL11_RS17410	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAL11_RS17410	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAL11_RS17415	PWY-6700	queuosine biosynthesis
CAL11_RS17420	PWY-6700	queuosine biosynthesis
CAL11_RS17575	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CAL11_RS17620	PWY-6823	molybdenum cofactor biosynthesis
CAL11_RS17630	PWY-6823	molybdenum cofactor biosynthesis
CAL11_RS17635	PWY-6823	molybdenum cofactor biosynthesis
CAL11_RS17655	PWY-1881	formate oxidation to CO<sub>2</sub>
CAL11_RS17655	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS17655	PWY-6696	oxalate degradation III
CAL11_RS17715	PWY-3781	aerobic respiration I (cytochrome c)
CAL11_RS17715	PWY-4521	arsenite oxidation I (respiratory)
CAL11_RS17715	PWY-6692	Fe(II) oxidation
CAL11_RS17715	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAL11_RS17715	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
CAL11_RS17855	PWY-3781	aerobic respiration I (cytochrome c)
CAL11_RS17855	PWY-4521	arsenite oxidation I (respiratory)
CAL11_RS17855	PWY-6692	Fe(II) oxidation
CAL11_RS17855	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CAL11_RS17855	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
CAL11_RS17980	PWY-723	alkylnitronates degradation
CAL11_RS18005	PWY-6610	adenine and adenosine salvage IV
CAL11_RS18155	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS18370	PWY-4202	arsenate detoxification I (glutaredoxin)
CAL11_RS18370	PWY-4621	arsenate detoxification II (glutaredoxin)
CAL11_RS18450	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS18450	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CAL11_RS18450	PWY-6638	sulfolactate degradation III
CAL11_RS18450	PWY-6642	(<i>R</i>)-cysteate degradation
CAL11_RS18450	PWY-6643	coenzyme M biosynthesis II
CAL11_RS18450	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CAL11_RS18450	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CAL11_RS18450	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS18465	PWY-5692	allantoin degradation to glyoxylate II
CAL11_RS18465	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
CAL11_RS18510	PWY-5331	taurine biosynthesis
CAL11_RS18525	PWY-6167	flavin biosynthesis II (archaea)
CAL11_RS18525	PWY-6168	flavin biosynthesis III (fungi)
CAL11_RS18525	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CAL11_RS18530	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS18585	PWY-5392	reductive TCA cycle II
CAL11_RS18585	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS18585	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS18585	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS18585	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS18585	PWY-6728	methylaspartate cycle
CAL11_RS18585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS18585	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS18700	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS18835	PWY-5451	acetone degradation I (to methylglyoxal)
CAL11_RS18835	PWY-6588	pyruvate fermentation to acetone
CAL11_RS18835	PWY-6876	isopropanol biosynthesis
CAL11_RS18835	PWY-7466	acetone degradation III (to propane-1,2-diol)
CAL11_RS18870	PWY-2941	L-lysine biosynthesis II
CAL11_RS18870	PWY-2942	L-lysine biosynthesis III
CAL11_RS18870	PWY-5097	L-lysine biosynthesis VI
CAL11_RS19115	PWY-5344	L-homocysteine biosynthesis
CAL11_RS19115	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
CAL11_RS19220	PWY-5532	adenosine nucleotides degradation IV
CAL11_RS19220	PWY-5723	Rubisco shunt
CAL11_RS19300	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CAL11_RS19395	PWY-7533	gliotoxin biosynthesis
CAL11_RS19480	PWY-4041	&gamma;-glutamyl cycle
CAL11_RS19480	PWY-5826	hypoglycin biosynthesis
CAL11_RS19580	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CAL11_RS19580	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CAL11_RS19610	PWY-7039	phosphatidate metabolism, as a signaling molecule
CAL11_RS19620	PWY-5686	UMP biosynthesis
CAL11_RS19630	PWY-5269	cardiolipin biosynthesis II
CAL11_RS19630	PWY-5668	cardiolipin biosynthesis I
CAL11_RS19635	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CAL11_RS19635	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CAL11_RS19635	PWY-6896	thiamin salvage I
CAL11_RS19635	PWY-6897	thiamin salvage II
CAL11_RS19645	PWY-6167	flavin biosynthesis II (archaea)
CAL11_RS19645	PWY-6168	flavin biosynthesis III (fungi)
CAL11_RS19650	PWY-6167	flavin biosynthesis II (archaea)
CAL11_RS19650	PWY-6168	flavin biosynthesis III (fungi)
CAL11_RS19650	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CAL11_RS19695	PWY-6825	phosphatidylcholine biosynthesis V
CAL11_RS19775	PWY-1281	sulfoacetaldehyde degradation I
CAL11_RS19775	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CAL11_RS19775	PWY-5482	pyruvate fermentation to acetate II
CAL11_RS19775	PWY-5485	pyruvate fermentation to acetate IV
CAL11_RS19775	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS19775	PWY-6637	sulfolactate degradation II
CAL11_RS19775	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CAL11_RS19835	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CAL11_RS19855	PWY-7560	methylerythritol phosphate pathway II
CAL11_RS19930	PWY-6749	CMP-legionaminate biosynthesis I
CAL11_RS19935	PWY-3801	sucrose degradation II (sucrose synthase)
CAL11_RS19935	PWY-5054	sorbitol biosynthesis I
CAL11_RS19935	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CAL11_RS19935	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CAL11_RS19935	PWY-5659	GDP-mannose biosynthesis
CAL11_RS19935	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS19935	PWY-621	sucrose degradation III (sucrose invertase)
CAL11_RS19935	PWY-622	starch biosynthesis
CAL11_RS19935	PWY-6981	chitin biosynthesis
CAL11_RS19935	PWY-6992	1,5-anhydrofructose degradation
CAL11_RS19935	PWY-7238	sucrose biosynthesis II
CAL11_RS19935	PWY-7347	sucrose biosynthesis III
CAL11_RS19935	PWY-7385	1,3-propanediol biosynthesis (engineered)
CAL11_RS19980	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAL11_RS19980	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CAL11_RS19980	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAL11_RS19995	PWY-3841	folate transformations II
CAL11_RS19995	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CAL11_RS19995	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS19995	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CAL11_RS19995	PWY-7199	pyrimidine deoxyribonucleosides salvage
CAL11_RS19995	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CAL11_RS20000	PWY-3841	folate transformations II
CAL11_RS20000	PWY-6614	tetrahydrofolate biosynthesis
CAL11_RS20015	PWY-5642	2,4-dinitrotoluene degradation
CAL11_RS20015	PWY-6373	acrylate degradation
CAL11_RS20095	PWY-6854	ethylene biosynthesis III (microbes)
CAL11_RS20130	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CAL11_RS20180	PWY-31	canavanine degradation
CAL11_RS20180	PWY-4984	urea cycle
CAL11_RS20180	PWY-6305	putrescine biosynthesis IV
CAL11_RS20180	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CAL11_RS20185	PWY-3341	L-proline biosynthesis III
CAL11_RS20185	PWY-4981	L-proline biosynthesis II (from arginine)
CAL11_RS20185	PWY-6344	L-ornithine degradation II (Stickland reaction)
CAL11_RS20185	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CAL11_RS20495	PWY-7533	gliotoxin biosynthesis
CAL11_RS20510	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CAL11_RS20510	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CAL11_RS20510	PWY-7717	CAL11_RS20510
CAL11_RS20510	PWY-7733	CAL11_RS20510
CAL11_RS20510	PWY-7734	CAL11_RS20510
CAL11_RS20810	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS20810	PWY-181	photorespiration
CAL11_RS20810	PWY-2161	folate polyglutamylation
CAL11_RS20810	PWY-2201	folate transformations I
CAL11_RS20810	PWY-3661	glycine betaine degradation I
CAL11_RS20810	PWY-3661-1	glycine betaine degradation II (mammalian)
CAL11_RS20810	PWY-3841	folate transformations II
CAL11_RS20810	PWY-5497	purine nucleobases degradation II (anaerobic)
CAL11_RS20870	PWY-5694	allantoin degradation to glyoxylate I
CAL11_RS20870	PWY-5705	allantoin degradation to glyoxylate III
CAL11_RS20880	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS20920	PWY-2941	L-lysine biosynthesis II
CAL11_RS20920	PWY-2942	L-lysine biosynthesis III
CAL11_RS20920	PWY-5097	L-lysine biosynthesis VI
CAL11_RS20960	PWY-6936	seleno-amino acid biosynthesis
CAL11_RS21015	PWY-5392	reductive TCA cycle II
CAL11_RS21015	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS21015	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS21015	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS21015	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS21015	PWY-6728	methylaspartate cycle
CAL11_RS21015	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS21015	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS21060	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CAL11_RS21060	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CAL11_RS21060	PWY-7717	CAL11_RS21060
CAL11_RS21060	PWY-7733	CAL11_RS21060
CAL11_RS21060	PWY-7734	CAL11_RS21060
CAL11_RS21145	PWY-7723	CAL11_RS21145
CAL11_RS21165	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS21265	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CAL11_RS21265	PWY-7118	chitin degradation to ethanol
CAL11_RS21365	PWY-2582	brassinosteroid biosynthesis II
CAL11_RS21365	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS21365	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS21365	PWY-6948	sitosterol degradation to androstenedione
CAL11_RS21365	PWY-699	brassinosteroid biosynthesis I
CAL11_RS21365	PWY-7299	progesterone biosynthesis
CAL11_RS21560	PWY-5350	thiosulfate disproportionation III (rhodanese)
CAL11_RS21585	PWY-5392	reductive TCA cycle II
CAL11_RS21585	PWY-5537	pyruvate fermentation to acetate V
CAL11_RS21585	PWY-5538	pyruvate fermentation to acetate VI
CAL11_RS21585	PWY-5690	TCA cycle II (plants and fungi)
CAL11_RS21585	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS21585	PWY-6728	methylaspartate cycle
CAL11_RS21585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS21585	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CAL11_RS21775	PWY-6853	ethylene biosynthesis II (microbes)
CAL11_RS21860	PWY-5694	allantoin degradation to glyoxylate I
CAL11_RS21860	PWY-5705	allantoin degradation to glyoxylate III
CAL11_RS21895	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS21970	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS21970	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS21970	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS21970	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS21980	PWY-6871	3-methylbutanol biosynthesis
CAL11_RS22025	PWY-6703	preQ<sub>0</sub> biosynthesis
CAL11_RS22030	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS22030	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CAL11_RS22030	PWY-5913	TCA cycle VI (obligate autotrophs)
CAL11_RS22030	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS22030	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CAL11_RS22030	PWY-6549	L-glutamine biosynthesis III
CAL11_RS22030	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CAL11_RS22030	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CAL11_RS22030	PWY-7124	ethylene biosynthesis V (engineered)
CAL11_RS22040	PWY-1361	benzoyl-CoA degradation I (aerobic)
CAL11_RS22040	PWY-5109	2-methylbutanoate biosynthesis
CAL11_RS22040	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CAL11_RS22040	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CAL11_RS22040	PWY-5177	glutaryl-CoA degradation
CAL11_RS22040	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CAL11_RS22040	PWY-6435	4-hydroxybenzoate biosynthesis V
CAL11_RS22040	PWY-6583	pyruvate fermentation to butanol I
CAL11_RS22040	PWY-6863	pyruvate fermentation to hexanol
CAL11_RS22040	PWY-6883	pyruvate fermentation to butanol II
CAL11_RS22040	PWY-6944	androstenedione degradation
CAL11_RS22040	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CAL11_RS22040	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CAL11_RS22040	PWY-7007	methyl ketone biosynthesis
CAL11_RS22040	PWY-7046	4-coumarate degradation (anaerobic)
CAL11_RS22040	PWY-7094	fatty acid salvage
CAL11_RS22040	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CAL11_RS22040	PWY-735	jasmonic acid biosynthesis
CAL11_RS22040	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CAL11_RS22040	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CAL11_RS22040	PWY-7726	CAL11_RS22040
CAL11_RS22070	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CAL11_RS22080	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CAL11_RS22085	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CAL11_RS22085	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CAL11_RS22085	PWY-7717	CAL11_RS22085
CAL11_RS22085	PWY-7733	CAL11_RS22085
CAL11_RS22085	PWY-7734	CAL11_RS22085
CAL11_RS22100	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CAL11_RS22100	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CAL11_RS22100	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CAL11_RS22100	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CAL11_RS22105	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CAL11_RS22145	PWY-6683	sulfate reduction III (assimilatory)
CAL11_RS22215	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAL11_RS22550	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS22625	PWY-3341	L-proline biosynthesis III
CAL11_RS22625	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CAL11_RS22660	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CAL11_RS22690	PWY-1622	formaldehyde assimilation I (serine pathway)
CAL11_RS22690	PWY-5484	glycolysis II (from fructose 6-phosphate)
CAL11_RS22710	PWY-5667	CDP-diacylglycerol biosynthesis I
CAL11_RS22710	PWY-5981	CDP-diacylglycerol biosynthesis III
CAL11_RS22720	PWY-6004	glycine betaine biosynthesis V (from glycine)
CAL11_RS22730	PWY-2201	folate transformations I
CAL11_RS22730	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CAL11_RS22735	PWY-6840	homoglutathione biosynthesis
CAL11_RS22735	PWY-7255	ergothioneine biosynthesis I (bacteria)
CAL11_RS22820	PWY-5033	nicotinate degradation II
CAL11_RS22820	PWY-6993	nicotine degradation II (pyrrolidine pathway)
CAL11_RS22820	PWY-7128	nicotine degradation III (VPP pathway)
CAL11_RS22820	PWY-722	nicotinate degradation I
CAL11_RS22870	PWY-6825	phosphatidylcholine biosynthesis V
CAL11_RS22890	PWY-5101	L-isoleucine biosynthesis II
CAL11_RS22890	PWY-5103	L-isoleucine biosynthesis III
CAL11_RS22890	PWY-5104	L-isoleucine biosynthesis IV
CAL11_RS22890	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CAL11_RS22955	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CAL11_RS22955	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CAL11_RS22970	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CAL11_RS22970	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CAL11_RS23005	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CAL11_RS23125	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CAL11_RS23125	PWY-6153	autoinducer AI-2 biosynthesis I
CAL11_RS23125	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CAL11_RS23190	PWY-2201	folate transformations I
CAL11_RS23190	PWY-3841	folate transformations II
CAL11_RS23200	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CAL11_RS23215	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CAL11_RS23215	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CAL11_RS23230	PWY-2941	L-lysine biosynthesis II
CAL11_RS23230	PWY-5097	L-lysine biosynthesis VI
CAL11_RS23310	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CAL11_RS23310	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CAL11_RS23310	PWY-6268	adenosylcobalamin salvage from cobalamin
CAL11_RS23310	PWY-6269	adenosylcobalamin salvage from cobinamide II
CAL11_RS23315	PWY-3221	dTDP-L-rhamnose biosynthesis II
CAL11_RS23315	PWY-6808	dTDP-D-forosamine biosynthesis
CAL11_RS23315	PWY-6942	dTDP-D-desosamine biosynthesis
CAL11_RS23315	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CAL11_RS23315	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CAL11_RS23315	PWY-6974	dTDP-L-olivose biosynthesis
CAL11_RS23315	PWY-6976	dTDP-L-mycarose biosynthesis
CAL11_RS23315	PWY-7104	dTDP-L-megosamine biosynthesis
CAL11_RS23315	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CAL11_RS23315	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CAL11_RS23315	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CAL11_RS23315	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CAL11_RS23315	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CAL11_RS23315	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CAL11_RS23315	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CAL11_RS23315	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CAL11_RS23315	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
CAL11_RS23315	PWY-7688	CAL11_RS23315
CAL11_RS23330	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CAL11_RS23330	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CAL11_RS23335	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CAL11_RS23335	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CAL11_RS23350	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CAL11_RS23350	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CAL11_RS23385	PWY-3961	phosphopantothenate biosynthesis II
CAL11_RS23395	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CAL11_RS23420	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
CAL11_RS23625	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CAL11_RS23625	PWY-7494	choline degradation IV
CAL11_RS23645	PWY-4381	fatty acid biosynthesis initiation I
CAL11_RS23660	PWY-2941	L-lysine biosynthesis II
CAL11_RS23660	PWY-2942	L-lysine biosynthesis III
CAL11_RS23660	PWY-5097	L-lysine biosynthesis VI
CAL11_RS23695	PWY-6728	methylaspartate cycle
CAL11_RS23695	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CAL11_RS23695	PWY-7118	chitin degradation to ethanol
CAL11_RS23695	PWY-7294	xylose degradation IV
CAL11_RS23695	PWY-7295	L-arabinose degradation IV
CAL11_RS23810	PWY-6164	3-dehydroquinate biosynthesis I
CAL11_RS23815	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CAL11_RS23835	PWY-2941	L-lysine biosynthesis II
CAL11_RS23835	PWY-2942	L-lysine biosynthesis III
CAL11_RS23835	PWY-5097	L-lysine biosynthesis VI
CAL11_RS23860	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CAL11_RS23860	PWY-5189	tetrapyrrole biosynthesis II (from glycine)