CAL12_RS00005	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CAL12_RS00010	SM00480	DNA polymerase III beta subunit
CAL12_RS00015	SM00387	Histidine kinase-like ATPases
CAL12_RS00015	SM00433	TopoisomeraseII
CAL12_RS00020	SM00822	CAL12_RS00020
CAL12_RS00045	SM00422	helix_turn_helix, mercury resistance
CAL12_RS00105	SM00829	Enoylreductase
CAL12_RS00110	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS00120	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS00125	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS00140	SM00829	Enoylreductase
CAL12_RS00160	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS00170	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS00185	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS00195	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS00205	SM00986	Uracil DNA glycosylase superfamily
CAL12_RS00205	SM00987	UreE urease accessory protein, C-terminal domain 
CAL12_RS00220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS00220	SM00387	Histidine kinase-like ATPases
CAL12_RS00220	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS00225	SM00448	cheY-homologous receiver domain
CAL12_RS00225	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS00275	SM00028	Tetratricopeptide repeats
CAL12_RS00315	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00320	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00350	SM00870	CAL12_RS00350
CAL12_RS00360	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00365	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00380	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS00385	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS00435	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CAL12_RS00440	SM00344	helix_turn_helix ASNC type
CAL12_RS00455	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CAL12_RS00455	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CAL12_RS00455	SM00493	CAL12_RS00455
CAL12_RS00475	SM01119	CAL12_RS00475
CAL12_RS00480	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00495	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS00505	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS00505	SM00895	CAL12_RS00505
CAL12_RS00525	SM00878	Biotin carboxylase C-terminal domain
CAL12_RS00525	SM01209	CAL12_RS00525
CAL12_RS00545	SM00422	helix_turn_helix, mercury resistance
CAL12_RS00550	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS00575	SM00836	DALR anticodon binding domain
CAL12_RS00575	SM01016	Arginyl tRNA synthetase N terminal dom
CAL12_RS00600	SM00354	helix_turn _helix lactose operon repressor
CAL12_RS00620	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00630	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00650	SM00917	LeuA allosteric (dimerisation) domain
CAL12_RS00700	SM00487	DEAD-like helicases superfamily
CAL12_RS00700	SM00490	helicase superfamily c-terminal domain
CAL12_RS00775	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAL12_RS00780	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS00865	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00890	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS00930	SM00829	Enoylreductase
CAL12_RS00955	SM00100	Cyclic nucleotide-monophosphate binding domain
CAL12_RS00960	SM00354	helix_turn _helix lactose operon repressor
CAL12_RS01065	SM00984	UDP binding domain
CAL12_RS01075	SM00344	helix_turn_helix ASNC type
CAL12_RS01105	SM00966	SpoVT / AbrB like domain 
CAL12_RS01110	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS01155	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS01160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS01160	SM00895	CAL12_RS01160
CAL12_RS01200	SM01119	CAL12_RS01200
CAL12_RS01225	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS01235	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS01240	SM00267	diguanylate cyclase
CAL12_RS01275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS01275	SM00866	CAL12_RS01275
CAL12_RS01285	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS01300	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS01305	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAL12_RS01315	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS01315	SM00866	CAL12_RS01315
CAL12_RS01330	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS01335	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS01335	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAL12_RS01345	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS01360	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS01410	SM00822	CAL12_RS01410
CAL12_RS01430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS01430	SM00895	CAL12_RS01430
CAL12_RS01465	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS01520	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS01540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS01540	SM00895	CAL12_RS01540
CAL12_RS01570	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS01570	SM00091	PAS domain
CAL12_RS01570	SM00387	Histidine kinase-like ATPases
CAL12_RS01570	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS01570	SM00448	cheY-homologous receiver domain
CAL12_RS01660	SM00749	bacterial OsmY and nodulation domain
CAL12_RS01720	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS01740	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAL12_RS01770	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CAL12_RS01830	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS01850	SM00882	Coenzyme A transferase
CAL12_RS01855	SM00882	Coenzyme A transferase
CAL12_RS01860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS01860	SM00895	CAL12_RS01860
CAL12_RS01900	SM00858	CAL12_RS01900
CAL12_RS02015	SM00965	Secretin and TonB N terminus short domain
CAL12_RS02055	SM01007	Class II Aldolase and Adducin N-terminal domain
CAL12_RS02060	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS02085	SM00895	CAL12_RS02085
CAL12_RS02090	SM00869	Autotransporter beta-domain
CAL12_RS02105	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS02210	SM00387	Histidine kinase-like ATPases
CAL12_RS02220	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS02235	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS02240	SM00644	CAL12_RS02240
CAL12_RS02255	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02255	SM00962	SRP54-type protein, GTPase domain
CAL12_RS02255	SM00963	SRP54-type protein, helical bundle domain
CAL12_RS02290	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02335	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS02365	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02400	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS02420	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02425	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02440	SM00267	diguanylate cyclase
CAL12_RS02445	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS02465	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02485	SM00450	Rhodanese Homology Domain
CAL12_RS02495	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02505	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS02585	SM00450	Rhodanese Homology Domain
CAL12_RS02675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS02700	SM00984	UDP binding domain
CAL12_RS02720	SM00448	cheY-homologous receiver domain
CAL12_RS02720	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS02725	SM00387	Histidine kinase-like ATPases
CAL12_RS02725	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS02755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS02755	SM00895	CAL12_RS02755
CAL12_RS02775	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CAL12_RS02775	SM01232	CAL12_RS02775
CAL12_RS02780	SM00028	Tetratricopeptide repeats
CAL12_RS02800	SM01400	CAL12_RS02800
CAL12_RS02850	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS02905	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02950	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS02950	SM00962	SRP54-type protein, GTPase domain
CAL12_RS02950	SM00963	SRP54-type protein, helical bundle domain
CAL12_RS02955	SM00880	CAL12_RS02955
CAL12_RS02955	SM01118	CAL12_RS02955
CAL12_RS02990	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CAL12_RS02995	SM00869	Autotransporter beta-domain
CAL12_RS03005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS03005	SM00895	CAL12_RS03005
CAL12_RS03010	SM00829	Enoylreductase
CAL12_RS03040	SM00858	CAL12_RS03040
CAL12_RS03055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS03055	SM00895	CAL12_RS03055
CAL12_RS03060	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03105	SM00883	Chaperonin 10 Kd subunit
CAL12_RS03125	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS03145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS03145	SM00895	CAL12_RS03145
CAL12_RS03160	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03180	SM01007	Class II Aldolase and Adducin N-terminal domain
CAL12_RS03200	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03230	SM00882	Coenzyme A transferase
CAL12_RS03245	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03275	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS03285	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS03300	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS03305	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS03310	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS03345	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03350	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03400	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS03435	SM00869	Autotransporter beta-domain
CAL12_RS03485	SM00822	CAL12_RS03485
CAL12_RS03505	SM00354	helix_turn _helix lactose operon repressor
CAL12_RS03520	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS03550	SM00829	Enoylreductase
CAL12_RS03570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS03575	SM00487	DEAD-like helicases superfamily
CAL12_RS03575	SM00490	helicase superfamily c-terminal domain
CAL12_RS03580	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAL12_RS03620	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03620	SM00448	cheY-homologous receiver domain
CAL12_RS03625	SM00387	Histidine kinase-like ATPases
CAL12_RS03625	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS03640	SM01236	CAL12_RS03640
CAL12_RS03650	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS03650	SM00091	PAS domain
CAL12_RS03650	SM00387	Histidine kinase-like ATPases
CAL12_RS03650	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS03650	SM00448	cheY-homologous receiver domain
CAL12_RS03670	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03700	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS03710	SM00822	CAL12_RS03710
CAL12_RS03730	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CAL12_RS03755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAL12_RS03765	SM00822	CAL12_RS03765
CAL12_RS03780	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS03780	SM00448	cheY-homologous receiver domain
CAL12_RS03785	SM00387	Histidine kinase-like ATPases
CAL12_RS03785	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS03785	SM00448	cheY-homologous receiver domain
CAL12_RS03810	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS03820	SM00834	Putative regulatory protein
CAL12_RS03860	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS03865	SM00903	Flavin reductase like domain
CAL12_RS03900	SM00487	DEAD-like helicases superfamily
CAL12_RS03900	SM00490	helicase superfamily c-terminal domain
CAL12_RS03905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS03905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS03970	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS03995	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS04000	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS04015	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS04055	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS04070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS04075	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS04095	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS04105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS04105	SM00895	CAL12_RS04105
CAL12_RS04125	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS04195	SM00986	Uracil DNA glycosylase superfamily
CAL12_RS04195	SM00987	UreE urease accessory protein, C-terminal domain 
CAL12_RS04295	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS04305	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS04330	SM00965	Secretin and TonB N terminus short domain
CAL12_RS04405	SM00822	CAL12_RS04405
CAL12_RS04420	SM00881	CoA binding domain
CAL12_RS04455	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CAL12_RS04465	SM00953	CAL12_RS04465
CAL12_RS04515	SM00822	CAL12_RS04515
CAL12_RS04555	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS04555	SM00448	cheY-homologous receiver domain
CAL12_RS04560	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS04560	SM00387	Histidine kinase-like ATPases
CAL12_RS04560	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS04560	SM00448	cheY-homologous receiver domain
CAL12_RS04605	SM00829	Enoylreductase
CAL12_RS04630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS04630	SM00895	CAL12_RS04630
CAL12_RS04695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS04700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS04700	SM00895	CAL12_RS04700
CAL12_RS04755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAL12_RS04755	SM00267	diguanylate cyclase
CAL12_RS04770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS04770	SM00387	Histidine kinase-like ATPases
CAL12_RS04770	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS04775	SM00448	cheY-homologous receiver domain
CAL12_RS04775	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS04805	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAL12_RS04805	SM00876	Biotin and Thiamin Synthesis associated domain
CAL12_RS04815	SM00869	Autotransporter beta-domain
CAL12_RS04860	SM01091	Transporter associated domain
CAL12_RS04875	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAL12_RS04880	SM00014	Acid phosphatase homologues
CAL12_RS04885	SM00363	S4 RNA-binding domain
CAL12_RS04895	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS04900	SM00901	CAL12_RS04900
CAL12_RS04925	SM01323	CAL12_RS04925
CAL12_RS04995	SM00919	Malic enzyme, NAD binding domain
CAL12_RS04995	SM01274	CAL12_RS04995
CAL12_RS05010	SM00861	Transketolase, pyrimidine binding domain
CAL12_RS05015	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CAL12_RS05030	SM00267	diguanylate cyclase
CAL12_RS05035	SM00271	DnaJ molecular chaperone homology domain
CAL12_RS05040	SM00852	Probable molybdopterin binding domain
CAL12_RS05055	SM00316	Ribosomal protein S1-like RNA-binding domain
CAL12_RS05075	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05100	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS05120	SM00072	Guanylate kinase homologues.
CAL12_RS05135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS05135	SM00866	CAL12_RS05135
CAL12_RS05160	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05165	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05185	SM00267	diguanylate cyclase
CAL12_RS05185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS05225	SM01001	AIR carboxylase
CAL12_RS05240	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS05245	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05250	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05280	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS05335	SM00869	Autotransporter beta-domain
CAL12_RS05360	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS05375	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05390	SM00903	Flavin reductase like domain
CAL12_RS05410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS05410	SM00387	Histidine kinase-like ATPases
CAL12_RS05410	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS05415	SM00448	cheY-homologous receiver domain
CAL12_RS05415	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS05435	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05440	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS05470	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05490	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS05540	SM00387	Histidine kinase-like ATPases
CAL12_RS05545	SM00448	cheY-homologous receiver domain
CAL12_RS05545	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS05555	SM00341	Helicase and RNase D C-terminal
CAL12_RS05555	SM00487	DEAD-like helicases superfamily
CAL12_RS05555	SM00490	helicase superfamily c-terminal domain
CAL12_RS05555	SM00956	CAL12_RS05555
CAL12_RS05565	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05580	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CAL12_RS05590	SM00798	AICARFT/IMPCHase bienzyme
CAL12_RS05590	SM00851	MGS-like domain
CAL12_RS05630	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05650	SM01011	Aminopeptidase P, N-terminal domain
CAL12_RS05715	SM00487	DEAD-like helicases superfamily
CAL12_RS05715	SM00490	helicase superfamily c-terminal domain
CAL12_RS05730	SM00852	Probable molybdopterin binding domain
CAL12_RS05735	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS05870	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS05885	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS05910	SM00869	Autotransporter beta-domain
CAL12_RS05920	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS05930	SM00822	CAL12_RS05930
CAL12_RS05950	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS05990	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS06015	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS06150	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS06170	SM01130	CAL12_RS06170
CAL12_RS06180	SM00895	CAL12_RS06180
CAL12_RS06245	SM00271	DnaJ molecular chaperone homology domain
CAL12_RS06260	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS06300	SM00650	Ribosomal RNA adenine dimethylases
CAL12_RS06340	SM00563	Phosphate acyltransferases
CAL12_RS06400	SM00853	MutL C terminal dimerisation domain
CAL12_RS06400	SM01340	CAL12_RS06400
CAL12_RS06410	SM00646	CAL12_RS06410
CAL12_RS06435	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS06465	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS06475	SM00493	CAL12_RS06475
CAL12_RS06490	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS06500	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CAL12_RS06505	SM00851	MGS-like domain
CAL12_RS06505	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CAL12_RS06515	SM00822	CAL12_RS06515
CAL12_RS06520	SM00855	Phosphoglycerate mutase family
CAL12_RS06540	SM01103	CAL12_RS06540
CAL12_RS06550	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS06595	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS06600	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS06605	SM01007	Class II Aldolase and Adducin N-terminal domain
CAL12_RS06655	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS06685	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS06710	SM00822	CAL12_RS06710
CAL12_RS06715	SM01060	CAL12_RS06715
CAL12_RS06805	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS06810	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS06850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS06850	SM00895	CAL12_RS06850
CAL12_RS06875	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS06890	SM01130	CAL12_RS06890
CAL12_RS06920	SM00487	DEAD-like helicases superfamily
CAL12_RS06920	SM00490	helicase superfamily c-terminal domain
CAL12_RS06935	SM00642	Alpha-amylase domain
CAL12_RS06965	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CAL12_RS07015	SM00411	bacterial (prokaryotic) histone like domain
CAL12_RS07025	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CAL12_RS07035	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07055	SM01012	CAL12_RS07055
CAL12_RS07060	SM00155	Phospholipase D. Active site motifs.
CAL12_RS07075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS07075	SM00866	CAL12_RS07075
CAL12_RS07085	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07145	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS07195	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07215	SM00491	CAL12_RS07215
CAL12_RS07235	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CAL12_RS07245	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07250	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07275	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAL12_RS07280	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAL12_RS07280	SM00091	PAS domain
CAL12_RS07280	SM00387	Histidine kinase-like ATPases
CAL12_RS07280	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS07280	SM00448	cheY-homologous receiver domain
CAL12_RS07300	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07395	SM01130	CAL12_RS07395
CAL12_RS07410	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CAL12_RS07415	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CAL12_RS07415	SM00534	ATPase domain of DNA mismatch repair MUTS family
CAL12_RS07480	SM00450	Rhodanese Homology Domain
CAL12_RS07485	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS07500	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07565	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS07585	SM01091	Transporter associated domain
CAL12_RS07605	SM00028	Tetratricopeptide repeats
CAL12_RS07610	SM00840	CAL12_RS07610
CAL12_RS07615	SM00478	endonuclease III
CAL12_RS07645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS07645	SM00895	CAL12_RS07645
CAL12_RS07720	SM00822	CAL12_RS07720
CAL12_RS07745	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS07750	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07790	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07795	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS07805	SM01012	CAL12_RS07805
CAL12_RS07810	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS07810	SM00091	PAS domain
CAL12_RS07810	SM00387	Histidine kinase-like ATPases
CAL12_RS07810	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS07810	SM00448	cheY-homologous receiver domain
CAL12_RS07910	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS07930	SM00448	cheY-homologous receiver domain
CAL12_RS07930	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS07935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS07935	SM00387	Histidine kinase-like ATPases
CAL12_RS07935	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS07945	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS07950	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS08095	SM00318	Staphylococcal nuclease homologues
CAL12_RS08115	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS08130	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS08145	SM00841	Elongation factor P, C-terminal
CAL12_RS08145	SM01185	CAL12_RS08145
CAL12_RS08170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS08200	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS08205	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS08210	SM00478	endonuclease III
CAL12_RS08210	SM00525	CAL12_RS08210
CAL12_RS08250	SM00954	Region found in RelA / SpoT proteins
CAL12_RS08290	SM00822	CAL12_RS08290
CAL12_RS08300	SM00316	Ribosomal protein S1-like RNA-binding domain
CAL12_RS08305	SM00363	S4 RNA-binding domain
CAL12_RS08325	SM00644	CAL12_RS08325
CAL12_RS08360	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CAL12_RS08365	SM00822	CAL12_RS08365
CAL12_RS08375	SM00825	Beta-ketoacyl synthase
CAL12_RS08400	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAL12_RS08405	SM00838	Elongation factor G C-terminus
CAL12_RS08415	SM00358	Double-stranded RNA binding motif
CAL12_RS08415	SM00535	Ribonuclease III family
CAL12_RS08555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS08555	SM00895	CAL12_RS08555
CAL12_RS08575	SM00882	Coenzyme A transferase
CAL12_RS08580	SM00882	Coenzyme A transferase
CAL12_RS08590	SM00155	Phospholipase D. Active site motifs.
CAL12_RS08610	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS08650	SM01192	CAL12_RS08650
CAL12_RS08650	SM01193	CAL12_RS08650
CAL12_RS08695	SM00796	Allophanate hydrolase subunit 1
CAL12_RS08700	SM00797	Allophanate hydrolase subunit 2
CAL12_RS08705	SM00981	CAL12_RS08705
CAL12_RS08750	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS08755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS08755	SM00895	CAL12_RS08755
CAL12_RS08815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS08815	SM00895	CAL12_RS08815
CAL12_RS08855	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS08865	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS08885	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CAL12_RS08885	SM00465	GIY-YIG type nucleases (URI domain)
CAL12_RS08895	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS08910	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS08920	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS08920	SM00464	Found in ATP-dependent protease La (LON)
CAL12_RS08940	SM00257	Lysin motif
CAL12_RS08945	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAL12_RS08950	SM00387	Histidine kinase-like ATPases
CAL12_RS08950	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS08955	SM00448	cheY-homologous receiver domain
CAL12_RS08955	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS08985	SM00464	Found in ATP-dependent protease La (LON)
CAL12_RS09010	SM01217	CAL12_RS09010
CAL12_RS09040	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09040	SM01086	C-terminal, D2-small domain, of ClpB protein
CAL12_RS09065	SM00357	Cold shock protein domain
CAL12_RS09065	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09065	SM00959	Rho termination factor, N-terminal domain
CAL12_RS09075	SM00387	Histidine kinase-like ATPases
CAL12_RS09075	SM00433	TopoisomeraseII
CAL12_RS09080	SM00434	DNA Topoisomerase IV
CAL12_RS09085	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS09175	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CAL12_RS09205	SM00562	CAL12_RS09205
CAL12_RS09215	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS09235	SM00564	beta-propeller repeat
CAL12_RS09240	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09260	SM00244	prohibitin homologues
CAL12_RS09265	SM00244	prohibitin homologues
CAL12_RS09275	SM00788	Adenylosuccinate synthetase
CAL12_RS09290	SM00400	zinc finger
CAL12_RS09290	SM00493	CAL12_RS09290
CAL12_RS09290	SM00766	DNA primase DnaG DnaB-binding
CAL12_RS09310	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS09345	SM00936	Penicillin-binding protein 5, C-terminal domain 
CAL12_RS09355	SM00344	helix_turn_helix ASNC type
CAL12_RS09365	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS09380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS09465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS09465	SM00387	Histidine kinase-like ATPases
CAL12_RS09465	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS09470	SM00448	cheY-homologous receiver domain
CAL12_RS09470	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS09475	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09505	SM00881	CoA binding domain
CAL12_RS09575	SM00858	CAL12_RS09575
CAL12_RS09585	SM00240	Forkhead associated domain
CAL12_RS09615	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAL12_RS09635	SM00448	cheY-homologous receiver domain
CAL12_RS09635	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS09640	SM00387	Histidine kinase-like ATPases
CAL12_RS09640	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS09645	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS09645	SM00267	diguanylate cyclase
CAL12_RS09650	SM00267	diguanylate cyclase
CAL12_RS09675	SM01329	CAL12_RS09675
CAL12_RS09680	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CAL12_RS09730	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS09740	SM00387	Histidine kinase-like ATPases
CAL12_RS09740	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS09740	SM00448	cheY-homologous receiver domain
CAL12_RS09745	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS09745	SM00448	cheY-homologous receiver domain
CAL12_RS09750	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CAL12_RS09800	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09805	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09835	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09840	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09875	SM00938	Nitrogen regulatory protein P-II
CAL12_RS09915	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS09940	SM00873	B3/4 domain
CAL12_RS09940	SM00874	tRNA synthetase B5 domain
CAL12_RS09940	SM00896	Ferredoxin-fold anticodon binding domain
CAL12_RS09945	SM00411	bacterial (prokaryotic) histone like domain
CAL12_RS09950	SM00422	helix_turn_helix, mercury resistance
CAL12_RS09970	SM00448	cheY-homologous receiver domain
CAL12_RS09975	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10025	SM01007	Class II Aldolase and Adducin N-terminal domain
CAL12_RS10055	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10090	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS10130	SM00825	Beta-ketoacyl synthase
CAL12_RS10135	SM00822	CAL12_RS10135
CAL12_RS10145	SM00825	Beta-ketoacyl synthase
CAL12_RS10205	SM00563	Phosphate acyltransferases
CAL12_RS10235	SM00481	DNA polymerase alpha chain like domain
CAL12_RS10280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS10280	SM00895	CAL12_RS10280
CAL12_RS10290	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS10320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS10320	SM00895	CAL12_RS10320
CAL12_RS10350	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS10360	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS10370	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS10420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS10420	SM00895	CAL12_RS10420
CAL12_RS10440	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10480	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS10500	SM00895	CAL12_RS10500
CAL12_RS10540	SM00822	CAL12_RS10540
CAL12_RS10560	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS10565	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS10570	SM01130	CAL12_RS10570
CAL12_RS10580	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10595	SM00822	CAL12_RS10595
CAL12_RS10625	SM00450	Rhodanese Homology Domain
CAL12_RS10650	SM01005	Alanine racemase, C-terminal domain
CAL12_RS10660	SM00344	helix_turn_helix ASNC type
CAL12_RS10670	SM00822	CAL12_RS10670
CAL12_RS10695	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS10725	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10740	SM00487	DEAD-like helicases superfamily
CAL12_RS10740	SM00490	helicase superfamily c-terminal domain
CAL12_RS10755	SM00869	Autotransporter beta-domain
CAL12_RS10770	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10775	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS10805	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10825	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS10935	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS10990	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAL12_RS10990	SM01134	CAL12_RS10990
CAL12_RS11010	SM00965	Secretin and TonB N terminus short domain
CAL12_RS11025	SM00923	MbtH-like protein
CAL12_RS11040	SM00823	Phosphopantetheine attachment site
CAL12_RS11045	SM00823	Phosphopantetheine attachment site
CAL12_RS11050	SM00823	Phosphopantetheine attachment site
CAL12_RS11055	SM00823	Phosphopantetheine attachment site
CAL12_RS11060	SM00823	Phosphopantetheine attachment site
CAL12_RS11060	SM00824	Thioesterase
CAL12_RS11085	SM01006	Siderophore biosynthesis protein domain
CAL12_RS11095	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS11110	SM01119	CAL12_RS11110
CAL12_RS11150	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS11170	SM00091	PAS domain
CAL12_RS11170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS11170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS11185	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAL12_RS11185	SM01134	CAL12_RS11185
CAL12_RS11205	SM00822	CAL12_RS11205
CAL12_RS11210	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS11235	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS11245	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS11245	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAL12_RS11250	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS11430	SM00327	von Willebrand factor (vWF) type A domain
CAL12_RS11465	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS11475	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS11565	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS11565	SM00267	diguanylate cyclase
CAL12_RS11580	SM01007	Class II Aldolase and Adducin N-terminal domain
CAL12_RS11600	SM00354	helix_turn _helix lactose operon repressor
CAL12_RS11610	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS11630	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS11665	SM00422	helix_turn_helix, mercury resistance
CAL12_RS11675	SM00422	helix_turn_helix, mercury resistance
CAL12_RS11730	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS11730	SM00448	cheY-homologous receiver domain
CAL12_RS11735	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS11735	SM00091	PAS domain
CAL12_RS11735	SM00387	Histidine kinase-like ATPases
CAL12_RS11735	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS11785	SM00028	Tetratricopeptide repeats
CAL12_RS11820	SM00448	cheY-homologous receiver domain
CAL12_RS11825	SM00073	Histidine Phosphotransfer domain
CAL12_RS11825	SM00260	Two component signalling adaptor domain
CAL12_RS11825	SM00387	Histidine kinase-like ATPases
CAL12_RS11825	SM01231	CAL12_RS11825
CAL12_RS11830	SM00260	Two component signalling adaptor domain
CAL12_RS11835	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS11835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS11840	SM00138	Methyltransferase, chemotaxis proteins 
CAL12_RS11845	SM00448	cheY-homologous receiver domain
CAL12_RS11850	SM00448	cheY-homologous receiver domain
CAL12_RS11870	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS11870	SM00962	SRP54-type protein, GTPase domain
CAL12_RS11885	SM00858	CAL12_RS11885
CAL12_RS11930	SM00047	Lysozyme subfamily 2
CAL12_RS11945	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS11945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS11955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS11955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS12010	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12035	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS12105	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAL12_RS12150	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAL12_RS12160	SM00935	Outer membrane protein (OmpH-like)
CAL12_RS12190	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CAL12_RS12205	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS12220	SM00244	prohibitin homologues
CAL12_RS12225	SM00267	diguanylate cyclase
CAL12_RS12280	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12285	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12295	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS12360	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12385	SM00947	Carbonic anhydrase
CAL12_RS12435	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12440	SM00387	Histidine kinase-like ATPases
CAL12_RS12440	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS12440	SM00448	cheY-homologous receiver domain
CAL12_RS12465	SM00244	prohibitin homologues
CAL12_RS12475	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12480	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12550	SM01329	CAL12_RS12550
CAL12_RS12650	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12755	SM00364	Leucine-rich repeats, bacterial type
CAL12_RS12760	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS12785	SM00882	Coenzyme A transferase
CAL12_RS12790	SM00882	Coenzyme A transferase
CAL12_RS12810	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS12865	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS12885	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12905	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CAL12_RS12920	SM00829	Enoylreductase
CAL12_RS12925	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS12955	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS12980	SM00829	Enoylreductase
CAL12_RS12995	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS13000	SM00895	CAL12_RS13000
CAL12_RS13010	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS13055	SM00091	PAS domain
CAL12_RS13055	SM00387	Histidine kinase-like ATPases
CAL12_RS13055	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS13055	SM00448	cheY-homologous receiver domain
CAL12_RS13060	SM00448	cheY-homologous receiver domain
CAL12_RS13065	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAL12_RS13065	SM00387	Histidine kinase-like ATPases
CAL12_RS13065	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS13100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS13100	SM00866	CAL12_RS13100
CAL12_RS13105	SM00829	Enoylreductase
CAL12_RS13135	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAL12_RS13165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS13205	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS13255	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS13330	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13335	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13360	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13375	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS13375	SM01034	Sensors of blue-light using FAD
CAL12_RS13420	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS13440	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS13455	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13460	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13485	SM00387	Histidine kinase-like ATPases
CAL12_RS13485	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS13485	SM00448	cheY-homologous receiver domain
CAL12_RS13490	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13500	SM00990	CAL12_RS13500
CAL12_RS13505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAL12_RS13595	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS13645	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS13660	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS13665	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS13710	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS13710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS13740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS13740	SM00866	CAL12_RS13740
CAL12_RS13760	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13790	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13820	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS13825	SM00822	CAL12_RS13825
CAL12_RS13835	SM00829	Enoylreductase
CAL12_RS13870	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS13875	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13880	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS13880	SM01086	C-terminal, D2-small domain, of ClpB protein
CAL12_RS13885	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS13885	SM00267	diguanylate cyclase
CAL12_RS13955	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS14010	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS14015	SM00869	Autotransporter beta-domain
CAL12_RS14030	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS14135	SM00829	Enoylreductase
CAL12_RS14210	SM00965	Secretin and TonB N terminus short domain
CAL12_RS14230	SM00822	CAL12_RS14230
CAL12_RS14235	SM01236	CAL12_RS14235
CAL12_RS14250	SM00448	cheY-homologous receiver domain
CAL12_RS14250	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS14255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS14255	SM00387	Histidine kinase-like ATPases
CAL12_RS14255	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS14360	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS14360	SM00448	cheY-homologous receiver domain
CAL12_RS14365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS14365	SM00387	Histidine kinase-like ATPases
CAL12_RS14365	SM00448	cheY-homologous receiver domain
CAL12_RS14370	SM00448	cheY-homologous receiver domain
CAL12_RS14375	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS14375	SM00091	PAS domain
CAL12_RS14375	SM00387	Histidine kinase-like ATPases
CAL12_RS14375	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS14380	SM00881	CoA binding domain
CAL12_RS14425	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS14430	SM00829	Enoylreductase
CAL12_RS14465	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS14480	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS14555	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS14640	SM01329	CAL12_RS14640
CAL12_RS14695	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS14695	SM00091	PAS domain
CAL12_RS14695	SM00387	Histidine kinase-like ATPases
CAL12_RS14695	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS14695	SM00448	cheY-homologous receiver domain
CAL12_RS14710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS14710	SM00895	CAL12_RS14710
CAL12_RS14720	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS14760	SM00855	Phosphoglycerate mutase family
CAL12_RS14775	SM01007	Class II Aldolase and Adducin N-terminal domain
CAL12_RS14790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS14790	SM00895	CAL12_RS14790
CAL12_RS14800	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS14815	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS14825	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS14835	SM00998	Adenylosuccinate lyase C-terminus
CAL12_RS14845	SM00450	Rhodanese Homology Domain
CAL12_RS14945	SM00972	Spore Coat Protein U domain
CAL12_RS14960	SM00972	Spore Coat Protein U domain
CAL12_RS14980	SM01005	Alanine racemase, C-terminal domain
CAL12_RS14990	SM00331	Sigma factor PP2C-like phosphatases
CAL12_RS14990	SM01049	CAL12_RS14990
CAL12_RS15020	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS15025	SM00869	Autotransporter beta-domain
CAL12_RS15045	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS15090	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15095	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15100	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS15125	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS15135	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS15170	SM00895	CAL12_RS15170
CAL12_RS15175	SM00028	Tetratricopeptide repeats
CAL12_RS15180	SM00100	Cyclic nucleotide-monophosphate binding domain
CAL12_RS15180	SM00419	helix_turn_helix, cAMP Regulatory protein
CAL12_RS15185	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS15240	SM00487	DEAD-like helicases superfamily
CAL12_RS15240	SM00490	helicase superfamily c-terminal domain
CAL12_RS15265	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS15285	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15310	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15310	SM00448	cheY-homologous receiver domain
CAL12_RS15315	SM00091	PAS domain
CAL12_RS15315	SM00387	Histidine kinase-like ATPases
CAL12_RS15315	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS15320	SM01230	CAL12_RS15320
CAL12_RS15325	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAL12_RS15335	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS15335	SM00267	diguanylate cyclase
CAL12_RS15340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS15340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS15380	SM00327	von Willebrand factor (vWF) type A domain
CAL12_RS15400	SM00327	von Willebrand factor (vWF) type A domain
CAL12_RS15430	SM00072	Guanylate kinase homologues.
CAL12_RS15435	SM01409	CAL12_RS15435
CAL12_RS15440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAL12_RS15440	SM00954	Region found in RelA / SpoT proteins
CAL12_RS15460	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS15465	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15475	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS15475	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAL12_RS15490	SM00248	ankyrin repeats
CAL12_RS15540	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15605	SM00344	helix_turn_helix ASNC type
CAL12_RS15640	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS15650	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS15665	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15690	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CAL12_RS15695	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15700	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15745	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15790	SM00861	Transketolase, pyrimidine binding domain
CAL12_RS15795	SM00344	helix_turn_helix ASNC type
CAL12_RS15835	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS15840	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS15860	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS15885	SM01322	CAL12_RS15885
CAL12_RS15905	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS15940	SM00938	Nitrogen regulatory protein P-II
CAL12_RS15975	SM00257	Lysin motif
CAL12_RS15990	SM01207	CAL12_RS15990
CAL12_RS16015	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS16065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS16065	SM00866	CAL12_RS16065
CAL12_RS16125	SM00829	Enoylreductase
CAL12_RS16145	SM00642	Alpha-amylase domain
CAL12_RS16150	SM00642	Alpha-amylase domain
CAL12_RS16155	SM00642	Alpha-amylase domain
CAL12_RS16160	SM00642	Alpha-amylase domain
CAL12_RS16165	SM00642	Alpha-amylase domain
CAL12_RS16175	SM00642	Alpha-amylase domain
CAL12_RS16180	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS16210	SM00829	Enoylreductase
CAL12_RS16215	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS16255	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS16295	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS16320	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS16350	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS16355	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS16395	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS16435	SM00829	Enoylreductase
CAL12_RS16440	SM00822	CAL12_RS16440
CAL12_RS16560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS16565	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS16570	SM00822	CAL12_RS16570
CAL12_RS16590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS16590	SM00895	CAL12_RS16590
CAL12_RS16600	SM00881	CoA binding domain
CAL12_RS16635	SM00822	CAL12_RS16635
CAL12_RS16660	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS16765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS16770	SM00829	Enoylreductase
CAL12_RS16785	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS16875	SM00822	CAL12_RS16875
CAL12_RS16880	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS16905	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS16915	SM00822	CAL12_RS16915
CAL12_RS16930	SM00822	CAL12_RS16930
CAL12_RS16970	SM00788	Adenylosuccinate synthetase
CAL12_RS16985	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS16990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAL12_RS16995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS17020	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS17030	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS17040	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAL12_RS17040	SM01240	CAL12_RS17040
CAL12_RS17045	SM00838	Elongation factor G C-terminus
CAL12_RS17045	SM00889	Elongation factor G, domain IV
CAL12_RS17065	SM01211	CAL12_RS17065
CAL12_RS17075	SM00481	DNA polymerase alpha chain like domain
CAL12_RS17085	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS17100	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17130	SM00822	CAL12_RS17130
CAL12_RS17160	SM00271	DnaJ molecular chaperone homology domain
CAL12_RS17185	SM00226	Low molecular weight phosphatase family
CAL12_RS17190	SM00487	DEAD-like helicases superfamily
CAL12_RS17190	SM00490	helicase superfamily c-terminal domain
CAL12_RS17205	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17205	SM00464	Found in ATP-dependent protease La (LON)
CAL12_RS17210	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17210	SM00994	ClpX C4-type zinc finger
CAL12_RS17210	SM01086	C-terminal, D2-small domain, of ClpB protein
CAL12_RS17230	SM00357	Cold shock protein domain
CAL12_RS17260	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17290	SM00904	Riboflavin kinase
CAL12_RS17340	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17345	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17385	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17385	SM01086	C-terminal, D2-small domain, of ClpB protein
CAL12_RS17395	SM01359	CAL12_RS17395
CAL12_RS17395	SM01360	CAL12_RS17395
CAL12_RS17405	SM00357	Cold shock protein domain
CAL12_RS17495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS17495	SM00895	CAL12_RS17495
CAL12_RS17500	SM01130	CAL12_RS17500
CAL12_RS17540	SM00387	Histidine kinase-like ATPases
CAL12_RS17540	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS17545	SM00448	cheY-homologous receiver domain
CAL12_RS17545	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS17575	SM00411	bacterial (prokaryotic) histone like domain
CAL12_RS17580	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CAL12_RS17590	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CAL12_RS17595	SM00316	Ribosomal protein S1-like RNA-binding domain
CAL12_RS17595	SM00357	Cold shock protein domain
CAL12_RS17595	SM00955	CAL12_RS17595
CAL12_RS17635	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17635	SM00448	cheY-homologous receiver domain
CAL12_RS17640	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17665	SM00155	Phospholipase D. Active site motifs.
CAL12_RS17705	SM00357	Cold shock protein domain
CAL12_RS17745	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CAL12_RS17745	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CAL12_RS17795	SM00528	Domain in histone-like proteins of HNS family
CAL12_RS17820	SM00829	Enoylreductase
CAL12_RS17830	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS17855	SM01329	CAL12_RS17855
CAL12_RS17870	SM01209	CAL12_RS17870
CAL12_RS17870	SM01210	CAL12_RS17870
CAL12_RS17930	SM00316	Ribosomal protein S1-like RNA-binding domain
CAL12_RS17945	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS17990	SM00481	DNA polymerase alpha chain like domain
CAL12_RS18065	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS18095	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS18125	SM00903	Flavin reductase like domain
CAL12_RS18180	SM01005	Alanine racemase, C-terminal domain
CAL12_RS18245	SM00670	Large family of predicted nucleotide-binding domains
CAL12_RS18265	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS18300	SM00861	Transketolase, pyrimidine binding domain
CAL12_RS18320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAL12_RS18325	SM00829	Enoylreductase
CAL12_RS18330	SM00450	Rhodanese Homology Domain
CAL12_RS18355	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CAL12_RS18355	SM00474	3'-5' exonuclease
CAL12_RS18355	SM00475	5'-3' exonuclease
CAL12_RS18355	SM00482	DNA polymerase A domain
CAL12_RS18390	SM00988	UreE urease accessory protein, N-terminal domain
CAL12_RS18435	SM00316	Ribosomal protein S1-like RNA-binding domain
CAL12_RS18445	SM00363	S4 RNA-binding domain
CAL12_RS18460	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CAL12_RS18470	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS18475	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS18495	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS18540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS18540	SM00895	CAL12_RS18540
CAL12_RS18580	SM00829	Enoylreductase
CAL12_RS18590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS18590	SM00866	CAL12_RS18590
CAL12_RS18600	SM01130	CAL12_RS18600
CAL12_RS18605	SM00858	CAL12_RS18605
CAL12_RS18695	SM00479	CAL12_RS18695
CAL12_RS18725	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAL12_RS18745	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS18765	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CAL12_RS18850	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CAL12_RS18865	SM00893	Electron transfer flavoprotein domain
CAL12_RS18870	SM00893	Electron transfer flavoprotein domain
CAL12_RS18890	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CAL12_RS18915	SM00411	bacterial (prokaryotic) histone like domain
CAL12_RS18920	SM00316	Ribosomal protein S1-like RNA-binding domain
CAL12_RS18945	SM00830	Chorismate mutase type II
CAL12_RS18955	SM00434	DNA Topoisomerase IV
CAL12_RS18990	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS19010	SM00858	CAL12_RS19010
CAL12_RS19050	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS19050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS19060	SM00138	Methyltransferase, chemotaxis proteins 
CAL12_RS19065	SM00260	Two component signalling adaptor domain
CAL12_RS19070	SM00073	Histidine Phosphotransfer domain
CAL12_RS19070	SM00260	Two component signalling adaptor domain
CAL12_RS19070	SM00387	Histidine kinase-like ATPases
CAL12_RS19070	SM00448	cheY-homologous receiver domain
CAL12_RS19075	SM00448	cheY-homologous receiver domain
CAL12_RS19080	SM00267	diguanylate cyclase
CAL12_RS19080	SM00448	cheY-homologous receiver domain
CAL12_RS19085	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS19085	SM00895	CAL12_RS19085
CAL12_RS19095	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS19110	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS19120	SM01209	CAL12_RS19120
CAL12_RS19130	SM00749	bacterial OsmY and nodulation domain
CAL12_RS19165	SM00822	CAL12_RS19165
CAL12_RS19180	SM00363	S4 RNA-binding domain
CAL12_RS19190	SM00491	CAL12_RS19190
CAL12_RS19195	SM00316	Ribosomal protein S1-like RNA-binding domain
CAL12_RS19195	SM00732	Likely ribonuclease with RNase H fold.
CAL12_RS19200	SM00364	Leucine-rich repeats, bacterial type
CAL12_RS19225	SM00861	Transketolase, pyrimidine binding domain
CAL12_RS19230	SM00919	Malic enzyme, NAD binding domain
CAL12_RS19230	SM01274	CAL12_RS19230
CAL12_RS19275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS19275	SM00866	CAL12_RS19275
CAL12_RS19405	SM00829	Enoylreductase
CAL12_RS19425	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CAL12_RS19475	SM01007	Class II Aldolase and Adducin N-terminal domain
CAL12_RS19480	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS19505	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS19510	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS19535	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS19555	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CAL12_RS19555	SM00292	breast cancer carboxy-terminal domain
CAL12_RS19555	SM00532	Ligase N family
CAL12_RS19560	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CAL12_RS19565	SM00968	SMC proteins Flexible Hinge Domain
CAL12_RS19575	SM00986	Uracil DNA glycosylase superfamily
CAL12_RS19575	SM00987	UreE urease accessory protein, C-terminal domain 
CAL12_RS19585	SM00448	cheY-homologous receiver domain
CAL12_RS19585	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS19590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS19590	SM00387	Histidine kinase-like ATPases
CAL12_RS19590	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS19615	SM00487	DEAD-like helicases superfamily
CAL12_RS19615	SM00490	helicase superfamily c-terminal domain
CAL12_RS19615	SM00982	CAL12_RS19615
CAL12_RS19615	SM01058	CarD-like/TRCF domain
CAL12_RS19680	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CAL12_RS19685	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CAL12_RS19765	SM00448	cheY-homologous receiver domain
CAL12_RS19785	SM00829	Enoylreductase
CAL12_RS19805	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS19805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS19805	SM00091	PAS domain
CAL12_RS19805	SM00267	diguanylate cyclase
CAL12_RS19805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS19835	SM00829	Enoylreductase
CAL12_RS19850	SM00448	cheY-homologous receiver domain
CAL12_RS19850	SM00850	LytTr DNA-binding domain
CAL12_RS19855	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS19855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAL12_RS19855	SM00267	diguanylate cyclase
CAL12_RS19920	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS19930	SM01060	CAL12_RS19930
CAL12_RS19940	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS19960	SM00344	helix_turn_helix ASNC type
CAL12_RS20020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS20020	SM00895	CAL12_RS20020
CAL12_RS20025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS20050	SM00829	Enoylreductase
CAL12_RS20065	SM00822	CAL12_RS20065
CAL12_RS20080	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS20085	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS20315	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS20325	SM00470	ParB-like nuclease domain
CAL12_RS20390	SM00387	Histidine kinase-like ATPases
CAL12_RS20405	SM00357	Cold shock protein domain
CAL12_RS20410	SM00448	cheY-homologous receiver domain
CAL12_RS20420	SM01068	Putative carbohydrate binding domain
CAL12_RS20440	SM00357	Cold shock protein domain
CAL12_RS20485	SM00822	CAL12_RS20485
CAL12_RS20520	SM00881	CoA binding domain
CAL12_RS20570	SM00470	ParB-like nuclease domain
CAL12_RS20615	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CAL12_RS20620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS20620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS20655	SM00822	CAL12_RS20655
CAL12_RS20660	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS20670	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS20675	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS20750	SM01130	CAL12_RS20750
CAL12_RS20805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS20805	SM00895	CAL12_RS20805
CAL12_RS20910	SM00316	Ribosomal protein S1-like RNA-binding domain
CAL12_RS20910	SM00322	K homology RNA-binding domain
CAL12_RS20915	SM01387	CAL12_RS20915
CAL12_RS21065	SM00869	Autotransporter beta-domain
CAL12_RS21140	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21155	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS21155	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAL12_RS21165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS21165	SM00895	CAL12_RS21165
CAL12_RS21170	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CAL12_RS21175	SM00226	Low molecular weight phosphatase family
CAL12_RS21195	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS21205	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CAL12_RS21205	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CAL12_RS21225	SM00829	Enoylreductase
CAL12_RS21300	SM00387	Histidine kinase-like ATPases
CAL12_RS21305	SM00448	cheY-homologous receiver domain
CAL12_RS21310	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS21325	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS21325	SM00448	cheY-homologous receiver domain
CAL12_RS21330	SM00387	Histidine kinase-like ATPases
CAL12_RS21330	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS21330	SM00448	cheY-homologous receiver domain
CAL12_RS21375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS21375	SM00866	CAL12_RS21375
CAL12_RS21390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS21390	SM00895	CAL12_RS21390
CAL12_RS21410	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS21440	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21455	SM00736	Dystroglycan-type cadherin-like domains.
CAL12_RS21470	SM01119	CAL12_RS21470
CAL12_RS21490	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21495	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21545	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21545	SM00843	CAL12_RS21545
CAL12_RS21555	SM00463	Small MutS-related domain
CAL12_RS21595	SM00387	Histidine kinase-like ATPases
CAL12_RS21595	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS21600	SM00448	cheY-homologous receiver domain
CAL12_RS21600	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS21630	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CAL12_RS21635	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS21660	SM01130	CAL12_RS21660
CAL12_RS21665	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS21670	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS21675	SM01329	CAL12_RS21675
CAL12_RS21695	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21720	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS21775	SM01130	CAL12_RS21775
CAL12_RS21800	SM00858	CAL12_RS21800
CAL12_RS21805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS21805	SM00895	CAL12_RS21805
CAL12_RS21810	SM00867	YceI-like domain 
CAL12_RS21815	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS21825	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21835	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS21850	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS21860	SM00091	PAS domain
CAL12_RS21860	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS21910	SM00357	Cold shock protein domain
CAL12_RS21915	SM00656	CAL12_RS21915
CAL12_RS21960	SM00984	UDP binding domain
CAL12_RS21965	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS21990	SM00267	diguanylate cyclase
CAL12_RS22005	SM00448	cheY-homologous receiver domain
CAL12_RS22015	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS22015	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CAL12_RS22015	SM00267	diguanylate cyclase
CAL12_RS22020	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS22075	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS22155	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS22155	SM00448	cheY-homologous receiver domain
CAL12_RS22160	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS22160	SM00448	cheY-homologous receiver domain
CAL12_RS22165	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS22165	SM00448	cheY-homologous receiver domain
CAL12_RS22175	SM01043	Bacterial transcriptional activator domain
CAL12_RS22195	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS22195	SM00930	CAL12_RS22195
CAL12_RS22240	SM00116	Domain in cystathionine beta-synthase and other proteins.
CAL12_RS22240	SM00924	MgtE intracellular N domain
CAL12_RS22280	SM00448	cheY-homologous receiver domain
CAL12_RS22285	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS22285	SM00448	cheY-homologous receiver domain
CAL12_RS22290	SM00091	PAS domain
CAL12_RS22290	SM00387	Histidine kinase-like ATPases
CAL12_RS22290	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS22330	SM00344	helix_turn_helix ASNC type
CAL12_RS22355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS22355	SM00895	CAL12_RS22355
CAL12_RS22365	SM00957	SecA DEAD-like domain
CAL12_RS22365	SM00958	SecA preprotein cross-linking domain
CAL12_RS22385	SM00864	Tubulin/FtsZ family, GTPase domain
CAL12_RS22385	SM00865	Tubulin/FtsZ family, C-terminal domain
CAL12_RS22390	SM00842	Cell division protein FtsA
CAL12_RS22470	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS22485	SM00151	SWI complex, BAF60b domains
CAL12_RS22520	SM00344	helix_turn_helix ASNC type
CAL12_RS22600	SM00387	Histidine kinase-like ATPases
CAL12_RS22600	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS22605	SM00448	cheY-homologous receiver domain
CAL12_RS22605	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS22660	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS22695	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS22695	SM01086	C-terminal, D2-small domain, of ClpB protein
CAL12_RS22755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS22760	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CAL12_RS22760	SM00387	Histidine kinase-like ATPases
CAL12_RS22760	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS22760	SM00448	cheY-homologous receiver domain
CAL12_RS22765	SM00138	Methyltransferase, chemotaxis proteins 
CAL12_RS22775	SM00387	Histidine kinase-like ATPases
CAL12_RS22775	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS22775	SM00448	cheY-homologous receiver domain
CAL12_RS22810	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS22825	SM00881	CoA binding domain
CAL12_RS22835	SM00861	Transketolase, pyrimidine binding domain
CAL12_RS22845	SM01350	CAL12_RS22845
CAL12_RS22865	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS22910	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS22940	SM00014	Acid phosphatase homologues
CAL12_RS22960	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS22960	SM00448	cheY-homologous receiver domain
CAL12_RS23135	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23150	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS23170	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23190	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23195	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS23215	SM00895	CAL12_RS23215
CAL12_RS23220	SM00903	Flavin reductase like domain
CAL12_RS23245	SM00448	cheY-homologous receiver domain
CAL12_RS23245	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS23250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS23250	SM00387	Histidine kinase-like ATPases
CAL12_RS23250	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS23255	SM00869	Autotransporter beta-domain
CAL12_RS23260	SM00869	Autotransporter beta-domain
CAL12_RS23310	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS23330	SM00895	CAL12_RS23330
CAL12_RS23345	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23390	SM01130	CAL12_RS23390
CAL12_RS23415	SM00869	Autotransporter beta-domain
CAL12_RS23420	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23445	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS23445	SM00895	CAL12_RS23445
CAL12_RS23465	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23545	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS23615	SM00869	Autotransporter beta-domain
CAL12_RS23715	SM00448	cheY-homologous receiver domain
CAL12_RS23720	SM00138	Methyltransferase, chemotaxis proteins 
CAL12_RS23725	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS23725	SM00448	cheY-homologous receiver domain
CAL12_RS23730	SM00260	Two component signalling adaptor domain
CAL12_RS23735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS23740	SM00073	Histidine Phosphotransfer domain
CAL12_RS23740	SM00260	Two component signalling adaptor domain
CAL12_RS23740	SM00387	Histidine kinase-like ATPases
CAL12_RS23740	SM01231	CAL12_RS23740
CAL12_RS23750	SM00448	cheY-homologous receiver domain
CAL12_RS23755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CAL12_RS23760	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS23800	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS23830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAL12_RS23845	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS23925	SM00852	Probable molybdopterin binding domain
CAL12_RS23930	SM00852	Probable molybdopterin binding domain
CAL12_RS23940	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAL12_RS23955	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CAL12_RS23960	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CAL12_RS23960	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CAL12_RS23990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS24010	SM01130	CAL12_RS24010
CAL12_RS24015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS24015	SM00895	CAL12_RS24015
CAL12_RS24050	SM00354	helix_turn _helix lactose operon repressor
CAL12_RS24095	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24100	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24125	SM01130	CAL12_RS24125
CAL12_RS24135	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS24140	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24160	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS24190	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS24220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS24220	SM00895	CAL12_RS24220
CAL12_RS24230	SM00479	CAL12_RS24230
CAL12_RS24245	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS24250	SM00257	Lysin motif
CAL12_RS24310	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24315	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24335	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CAL12_RS24340	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CAL12_RS24350	SM00387	Histidine kinase-like ATPases
CAL12_RS24350	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS24360	SM00823	Phosphopantetheine attachment site
CAL12_RS24360	SM00824	Thioesterase
CAL12_RS24400	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS24410	SM00822	CAL12_RS24410
CAL12_RS24425	SM00882	Coenzyme A transferase
CAL12_RS24430	SM00882	Coenzyme A transferase
CAL12_RS24440	SM00998	Adenylosuccinate lyase C-terminus
CAL12_RS24480	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CAL12_RS24495	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24520	SM01400	CAL12_RS24520
CAL12_RS24525	SM00849	Metallo-beta-lactamase superfamily
CAL12_RS24525	SM01027	Beta-Casp domain
CAL12_RS24530	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CAL12_RS24535	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CAL12_RS24575	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS24670	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24685	SM00763	PrkA AAA domain
CAL12_RS24715	SM00363	S4 RNA-binding domain
CAL12_RS24740	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CAL12_RS24755	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24760	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24865	SM00878	Biotin carboxylase C-terminal domain
CAL12_RS24895	SM00955	CAL12_RS24895
CAL12_RS24900	SM00448	cheY-homologous receiver domain
CAL12_RS24900	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS24905	SM00387	Histidine kinase-like ATPases
CAL12_RS24905	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS24920	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS24950	SM00563	Phosphate acyltransferases
CAL12_RS24955	SM00732	Likely ribonuclease with RNase H fold.
CAL12_RS25015	SM00267	diguanylate cyclase
CAL12_RS25030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS25030	SM00331	Sigma factor PP2C-like phosphatases
CAL12_RS25035	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25040	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25065	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS25080	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25130	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS25225	SM00829	Enoylreductase
CAL12_RS25240	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25255	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS25260	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25280	SM00478	endonuclease III
CAL12_RS25320	SM00845	GatB domain
CAL12_RS25335	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS25335	SM00267	diguanylate cyclase
CAL12_RS25365	SM00421	helix_turn_helix, Lux Regulon
CAL12_RS25395	SM01329	CAL12_RS25395
CAL12_RS25420	SM00822	CAL12_RS25420
CAL12_RS25425	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS25450	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS25470	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS25485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS25485	SM00895	CAL12_RS25485
CAL12_RS25495	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS25510	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25525	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS25535	SM01018	B12 binding domain
CAL12_RS25590	SM00978	CAL12_RS25590
CAL12_RS25600	SM00448	cheY-homologous receiver domain
CAL12_RS25600	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS25605	SM00387	Histidine kinase-like ATPases
CAL12_RS25605	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS25625	SM00796	Allophanate hydrolase subunit 1
CAL12_RS25630	SM00797	Allophanate hydrolase subunit 2
CAL12_RS25640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS25685	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS25715	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25720	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25755	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25770	SM00487	DEAD-like helicases superfamily
CAL12_RS25770	SM00490	helicase superfamily c-terminal domain
CAL12_RS25795	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25845	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAL12_RS25850	SM00450	Rhodanese Homology Domain
CAL12_RS25860	SM00905	Dihydroneopterin aldolase
CAL12_RS25885	SM00937	CAL12_RS25885
CAL12_RS25935	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS25950	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS25955	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CAL12_RS25960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS25960	SM00895	CAL12_RS25960
CAL12_RS25965	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS26025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS26025	SM00895	CAL12_RS26025
CAL12_RS26045	SM01236	CAL12_RS26045
CAL12_RS26085	SM00925	MltA specific insert domain
CAL12_RS26130	SM00387	Histidine kinase-like ATPases
CAL12_RS26130	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS26130	SM00448	cheY-homologous receiver domain
CAL12_RS26145	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS26150	SM01007	Class II Aldolase and Adducin N-terminal domain
CAL12_RS26180	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CAL12_RS26180	SM00245	tail specific protease
CAL12_RS26190	SM00855	Phosphoglycerate mutase family
CAL12_RS26195	SM00450	Rhodanese Homology Domain
CAL12_RS26255	SM00448	cheY-homologous receiver domain
CAL12_RS26260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CAL12_RS26260	SM00387	Histidine kinase-like ATPases
CAL12_RS26260	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS26280	SM00448	cheY-homologous receiver domain
CAL12_RS26280	SM00862	Transcriptional regulatory protein, C terminal
CAL12_RS26285	SM00387	Histidine kinase-like ATPases
CAL12_RS26285	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS26305	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS26315	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS26320	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS26320	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CAL12_RS26325	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS26340	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS26345	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAL12_RS26400	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS26410	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS26430	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS26440	SM00100	Cyclic nucleotide-monophosphate binding domain
CAL12_RS26450	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS26455	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS26555	SM00986	Uracil DNA glycosylase superfamily
CAL12_RS26555	SM00987	UreE urease accessory protein, C-terminal domain 
CAL12_RS26560	SM00487	DEAD-like helicases superfamily
CAL12_RS26560	SM00490	helicase superfamily c-terminal domain
CAL12_RS26595	SM00460	Transglutaminase/protease-like homologues
CAL12_RS26620	SM00996	S-adenosyl-L-homocysteine hydrolase
CAL12_RS26620	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CAL12_RS26655	SM00387	Histidine kinase-like ATPases
CAL12_RS26655	SM00388	His Kinase A (phosphoacceptor) domain
CAL12_RS26655	SM00448	cheY-homologous receiver domain
CAL12_RS26660	SM00331	Sigma factor PP2C-like phosphatases
CAL12_RS26720	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS26730	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CAL12_RS26745	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS26745	SM01086	C-terminal, D2-small domain, of ClpB protein
CAL12_RS26770	SM00729	Elongator protein 3, MiaB family, Radical SAM
CAL12_RS26775	SM00671	Sel1-like repeats.
CAL12_RS26795	SM00936	Penicillin-binding protein 5, C-terminal domain 
CAL12_RS26800	SM00052	Putative diguanylate phosphodiesterase
CAL12_RS26800	SM00267	diguanylate cyclase
CAL12_RS26825	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS26870	SM00861	Transketolase, pyrimidine binding domain
CAL12_RS26905	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS27050	SM00155	Phospholipase D. Active site motifs.
CAL12_RS27070	SM00834	Putative regulatory protein
CAL12_RS27085	SM00710	Parallel beta-helix repeats
CAL12_RS27085	SM00869	Autotransporter beta-domain
CAL12_RS27095	SM01130	CAL12_RS27095
CAL12_RS27125	SM00822	CAL12_RS27125
CAL12_RS27160	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS27165	SM00346	helix_turn_helix isocitrate lyase regulation
CAL12_RS27170	SM00530	Helix-turn-helix XRE-family like proteins 
CAL12_RS27210	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS27260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CAL12_RS27260	SM00895	CAL12_RS27260
CAL12_RS27275	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS27280	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS27295	SM00822	CAL12_RS27295
CAL12_RS27355	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS27420	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CAL12_RS27440	SM01219	CAL12_RS27440
CAL12_RS27475	SM01004	Delta-aminolevulinic acid dehydratase
CAL12_RS27495	SM00662	RNA polymerases D
CAL12_RS27500	SM00363	S4 RNA-binding domain
CAL12_RS27500	SM01390	CAL12_RS27500
CAL12_RS27575	SM01374	CAL12_RS27575
CAL12_RS27640	SM01382	CAL12_RS27640
CAL12_RS27640	SM01383	CAL12_RS27640
CAL12_RS27660	SM01403	CAL12_RS27660
CAL12_RS27670	SM00838	Elongation factor G C-terminus
CAL12_RS27670	SM00889	Elongation factor G, domain IV
CAL12_RS27705	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS27710	SM00062	Bacterial periplasmic substrate-binding proteins
CAL12_RS27745	SM00663	RNA polymerase I subunit A N-terminus
CAL12_RS27770	SM00649	Ribosomal protein L11/L12
CAL12_RS27775	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CAL12_RS27775	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CAL12_RS27820	SM01230	CAL12_RS27820
CAL12_RS27825	SM00420	helix_turn_helix, Deoxyribose operon repressor
CAL12_RS27825	SM01134	CAL12_RS27825
CAL12_RS27830	SM00870	CAL12_RS27830
CAL12_RS27835	SM00470	ParB-like nuclease domain
CAL12_RS27855	SM01228	CAL12_RS27855
CAL12_RS27860	SM00357	Cold shock protein domain
CAL12_RS27875	SM00347	helix_turn_helix multiple antibiotic resistance protein
CAL12_RS27890	SM00342	helix_turn_helix, arabinose operon control protein
CAL12_RS27915	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS27920	SM00382	ATPases associated with a variety of cellular activities
CAL12_RS27955	SM00881	CoA binding domain
CAL12_RS27975	SM01234	CAL12_RS27975
