locus-tag class description ACR55_RS00005 PF13932 GidA associated domain ACR55_RS00005 PF01134 Glucose inhibited division protein A ACR55_RS00010 PF02527 rRNA small subunit methyltransferase G ACR55_RS00015 PF13614 AAA domain ACR55_RS00020 PF17762 HTH domain found in ParB protein ACR55_RS00020 PF02195 ParB-like nuclease domain ACR55_RS00025 PF00710 Asparaginase, N-terminal ACR55_RS00025 PF17763 Glutaminase/Asparaginase C-terminal domain ACR55_RS00045 PF03143 Elongation factor Tu C-terminal domain ACR55_RS00045 PF03144 Elongation factor Tu domain 2 ACR55_RS00045 PF00009 Elongation factor Tu GTP binding domain ACR55_RS00055 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ACR55_RS00060 PF02357 Transcription termination factor nusG ACR55_RS00060 PF00467 KOW motif ACR55_RS00065 PF03946 Ribosomal protein L11, N-terminal domain ACR55_RS00065 PF00298 Ribosomal protein L11, RNA binding domain ACR55_RS00070 PF00687 Ribosomal protein L1p/L10e family ACR55_RS00075 PF00466 Ribosomal protein L10 ACR55_RS00080 PF16320 Ribosomal protein L7/L12 dimerisation domain ACR55_RS00080 PF00542 Ribosomal protein L7/L12 C-terminal domain ACR55_RS00085 PF04560 RNA polymerase Rpb2, domain 7 ACR55_RS00085 PF04563 RNA polymerase beta subunit ACR55_RS00085 PF00562 RNA polymerase Rpb2, domain 6 ACR55_RS00085 PF10385 RNA polymerase beta subunit external 1 domain ACR55_RS00085 PF04565 RNA polymerase Rpb2, domain 3 ACR55_RS00085 PF04561 RNA polymerase Rpb2, domain 2 ACR55_RS00090 PF04997 RNA polymerase Rpb1, domain 1 ACR55_RS00090 PF00623 RNA polymerase Rpb1, domain 2 ACR55_RS00090 PF04983 RNA polymerase Rpb1, domain 3 ACR55_RS00090 PF05000 RNA polymerase Rpb1, domain 4 ACR55_RS00090 PF04998 RNA polymerase Rpb1, domain 5 ACR55_RS00105 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS00105 PF00989 PAS fold ACR55_RS00105 PF11808 Phosphate regulon sensor protein PhoR ACR55_RS00115 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS00115 PF00072 Response regulator receiver domain ACR55_RS00125 PF00164 Ribosomal protein S12/S23 ACR55_RS00130 PF00177 Ribosomal protein S7p/S5e ACR55_RS00135 PF14492 Elongation Factor G, domain II ACR55_RS00135 PF00679 Elongation factor G C-terminus ACR55_RS00135 PF03764 Elongation factor G, domain IV ACR55_RS00135 PF00009 Elongation factor Tu GTP binding domain ACR55_RS00135 PF03144 Elongation factor Tu domain 2 ACR55_RS00140 PF00009 Elongation factor Tu GTP binding domain ACR55_RS00140 PF03143 Elongation factor Tu C-terminal domain ACR55_RS00140 PF03144 Elongation factor Tu domain 2 ACR55_RS00145 PF00338 Ribosomal protein S10p/S20e ACR55_RS00150 PF00297 Ribosomal protein L3 ACR55_RS00155 PF00573 Ribosomal protein L4/L1 family ACR55_RS00160 PF00276 Ribosomal protein L23 ACR55_RS00165 PF00181 Ribosomal Proteins L2, RNA binding domain ACR55_RS00165 PF03947 Ribosomal Proteins L2, C-terminal domain ACR55_RS00170 PF00203 Ribosomal protein S19 ACR55_RS00175 PF00237 Ribosomal protein L22p/L17e ACR55_RS00180 PF00189 Ribosomal protein S3, C-terminal domain ACR55_RS00180 PF07650 KH domain ACR55_RS00185 PF00252 Ribosomal protein L16p/L10e ACR55_RS00190 PF00831 Ribosomal L29 protein ACR55_RS00195 PF00366 Ribosomal protein S17 ACR55_RS00210 PF00005 ABC transporter ACR55_RS00215 PF00005 ABC transporter ACR55_RS00225 PF00561 alpha/beta hydrolase fold ACR55_RS00240 PF00171 Aldehyde dehydrogenase family ACR55_RS00250 PF00238 Ribosomal protein L14p/L23e ACR55_RS00255 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACR55_RS00260 PF00281 Ribosomal protein L5 ACR55_RS00260 PF00673 ribosomal L5P family C-terminus ACR55_RS00265 PF00253 Ribosomal protein S14p/S29e ACR55_RS00270 PF00410 Ribosomal protein S8 ACR55_RS00275 PF00347 Ribosomal protein L6 ACR55_RS00280 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACR55_RS00285 PF00333 Ribosomal protein S5, N-terminal domain ACR55_RS00285 PF03719 Ribosomal protein S5, C-terminal domain ACR55_RS00290 PF00327 Ribosomal protein L30p/L7e ACR55_RS00295 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACR55_RS00300 PF00344 SecY translocase ACR55_RS00305 PF01176 Translation initiation factor 1A / IF-1 ACR55_RS00310 PF00416 Ribosomal protein S13/S18 ACR55_RS00315 PF00411 Ribosomal protein S11 ACR55_RS00320 PF00163 Ribosomal protein S4/S9 N-terminal domain ACR55_RS00320 PF01479 S4 domain ACR55_RS00325 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACR55_RS00325 PF01000 RNA polymerase Rpb3/RpoA insert domain ACR55_RS00325 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACR55_RS00330 PF01196 Ribosomal protein L17 ACR55_RS00340 PF03091 CutA1 divalent ion tolerance protein ACR55_RS00345 PF02683 Cytochrome C biogenesis protein transmembrane region ACR55_RS00345 PF11412 Disulphide bond corrector protein DsbC ACR55_RS00355 PF00490 Delta-aminolevulinic acid dehydratase ACR55_RS00360 PF01926 50S ribosome-binding GTPase ACR55_RS00365 PF00034 Cytochrome c ACR55_RS00370 PF05140 ResB-like family ACR55_RS00375 PF01578 Cytochrome C assembly protein ACR55_RS00380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACR55_RS00380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACR55_RS00385 PF01491 Frataxin-like domain ACR55_RS00390 PF17092 Penicillin-binding protein OB-like domain ACR55_RS00390 PF00905 Penicillin binding protein transpeptidase domain ACR55_RS00390 PF00912 Transglycosylase ACR55_RS00395 PF01202 Shikimate kinase ACR55_RS00400 PF01761 3-dehydroquinate synthase ACR55_RS00405 PF01966 HD domain ACR55_RS00405 PF13286 Phosphohydrolase-associated domain ACR55_RS00415 PF13417 Glutathione S-transferase, N-terminal domain ACR55_RS00415 PF00043 Glutathione S-transferase, C-terminal domain ACR55_RS00420 PF17755 UvrA DNA-binding domain ACR55_RS00420 PF17760 UvrA interaction domain ACR55_RS00425 PF07690 Major Facilitator Superfamily ACR55_RS00430 PF00436 Single-strand binding protein family ACR55_RS00435 PF01370 NAD dependent epimerase/dehydratase family ACR55_RS00440 PF13537 Glutamine amidotransferase domain ACR55_RS00440 PF00733 Asparagine synthase ACR55_RS00470 PF00551 Formyl transferase ACR55_RS00470 PF02911 Formyl transferase, C-terminal domain ACR55_RS00480 PF00733 Asparagine synthase ACR55_RS00480 PF13537 Glutamine amidotransferase domain ACR55_RS00500 PF13537 Glutamine amidotransferase domain ACR55_RS00500 PF00733 Asparagine synthase ACR55_RS00515 PF02719 Polysaccharide biosynthesis protein ACR55_RS00520 PF02397 Bacterial sugar transferase ACR55_RS00525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACR55_RS00535 PF02350 UDP-N-acetylglucosamine 2-epimerase ACR55_RS00540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACR55_RS00545 PF00132 Bacterial transferase hexapeptide (six repeats) ACR55_RS00550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACR55_RS00550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACR55_RS00555 PF00690 Cation transporter/ATPase, N-terminus ACR55_RS00555 PF00689 Cation transporting ATPase, C-terminus ACR55_RS00560 PF00072 Response regulator receiver domain ACR55_RS00560 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS00565 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS00575 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS00580 PF00005 ABC transporter ACR55_RS00580 PF08402 TOBE domain ACR55_RS00585 PF01274 Malate synthase ACR55_RS00590 PF07729 FCD domain ACR55_RS00590 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS00600 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS00610 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS00620 PF00005 ABC transporter ACR55_RS00625 PF00107 Zinc-binding dehydrogenase ACR55_RS00625 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS00630 PF01040 UbiA prenyltransferase family ACR55_RS00635 PF00155 Aminotransferase class I and II ACR55_RS00640 PF13185 GAF domain ACR55_RS00645 PF00701 Dihydrodipicolinate synthetase family ACR55_RS00650 PF13520 Amino acid permease ACR55_RS00660 PF00732 GMC oxidoreductase ACR55_RS00660 PF05199 GMC oxidoreductase ACR55_RS00680 PF01336 OB-fold nucleic acid binding domain ACR55_RS00680 PF00152 tRNA synthetases class II (D, K and N) ACR55_RS00680 PF02938 GAD domain ACR55_RS00685 PF03372 Endonuclease/Exonuclease/phosphatase family ACR55_RS00690 PF13091 PLD-like domain ACR55_RS00700 PF07690 Major Facilitator Superfamily ACR55_RS00715 PF16363 GDP-mannose 4,6 dehydratase ACR55_RS00720 PF04321 RmlD substrate binding domain ACR55_RS00725 PF00483 Nucleotidyl transferase ACR55_RS00730 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACR55_RS00735 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACR55_RS00740 PF00534 Glycosyl transferases group 1 ACR55_RS00740 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ACR55_RS00745 PF03309 Type III pantothenate kinase ACR55_RS00755 PF02405 Permease MlaE ACR55_RS00760 PF00005 ABC transporter ACR55_RS00780 PF07943 Penicillin-binding protein 5, C-terminal domain ACR55_RS00780 PF00768 D-alanyl-D-alanine carboxypeptidase ACR55_RS00785 PF01063 Amino-transferase class IV ACR55_RS00790 PF04359 Protein of unknown function (DUF493) ACR55_RS00795 PF03099 Biotin/lipoate A/B protein ligase family ACR55_RS00800 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ACR55_RS00800 PF04055 Radical SAM superfamily ACR55_RS00805 PF01923 Cobalamin adenosyltransferase ACR55_RS00815 PF07724 AAA domain (Cdc48 subfamily) ACR55_RS00815 PF00004 ATPase family associated with various cellular activities (AAA) ACR55_RS00820 PF00227 Proteasome subunit ACR55_RS00825 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACR55_RS00830 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACR55_RS00830 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACR55_RS00835 PF01475 Ferric uptake regulator family ACR55_RS00840 PF00005 ABC transporter ACR55_RS00845 PF00950 ABC 3 transport family ACR55_RS00850 PF01297 Zinc-uptake complex component A periplasmic ACR55_RS00865 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS00865 PF00593 TonB dependent receptor ACR55_RS00870 PF02899 Phage integrase, N-terminal SAM-like domain ACR55_RS00870 PF00589 Phage integrase family ACR55_RS00880 PF01678 Diaminopimelate epimerase ACR55_RS00885 PF03279 Bacterial lipid A biosynthesis acyltransferase ACR55_RS00895 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACR55_RS00895 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACR55_RS00895 PF02772 S-adenosylmethionine synthetase, central domain ACR55_RS00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS00900 PF03466 LysR substrate binding domain ACR55_RS00905 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS00910 PF00330 Aconitase family (aconitate hydratase) ACR55_RS00915 PF00694 Aconitase C-terminal domain ACR55_RS00920 PF00561 alpha/beta hydrolase fold ACR55_RS00930 PF00534 Glycosyl transferases group 1 ACR55_RS00930 PF13439 Glycosyltransferase Family 4 ACR55_RS00935 PF05221 S-adenosyl-L-homocysteine hydrolase ACR55_RS00935 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACR55_RS00940 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ACR55_RS00945 PF02219 Methylenetetrahydrofolate reductase ACR55_RS00950 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS00960 PF05114 Protein of unknown function (DUF692) ACR55_RS00980 PF08379 Bacterial transglutaminase-like N-terminal region ACR55_RS00980 PF01841 Transglutaminase-like superfamily ACR55_RS00990 PF14403 Circularly permuted ATP-grasp type 2 ACR55_RS00995 PF01812 5-formyltetrahydrofolate cyclo-ligase family ACR55_RS01000 PF01464 Transglycosylase SLT domain ACR55_RS01000 PF14718 Soluble lytic murein transglycosylase L domain ACR55_RS01005 PF12627 Probable RNA and SrmB- binding site of polymerase A ACR55_RS01005 PF01743 Poly A polymerase head domain ACR55_RS01015 PF00270 DEAD/DEAH box helicase ACR55_RS01015 PF00271 Helicase conserved C-terminal domain ACR55_RS01020 PF03167 Uracil DNA glycosylase superfamily ACR55_RS01025 PF01048 Phosphorylase superfamily ACR55_RS01030 PF03466 LysR substrate binding domain ACR55_RS01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01035 PF07690 Major Facilitator Superfamily ACR55_RS01040 PF02311 AraC-like ligand binding domain ACR55_RS01040 PF12833 Helix-turn-helix domain ACR55_RS01045 PF01475 Ferric uptake regulator family ACR55_RS01055 PF06965 Na+/H+ antiporter 1 ACR55_RS01070 PF03976 Polyphosphate kinase 2 (PPK2) ACR55_RS01075 PF00753 Metallo-beta-lactamase superfamily ACR55_RS01085 PF04143 Sulphur transport ACR55_RS01095 PF00501 AMP-binding enzyme ACR55_RS01095 PF14535 AMP-binding enzyme C-terminal domain ACR55_RS01100 PF00005 ABC transporter ACR55_RS01115 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS01120 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS01120 PF00005 ABC transporter ACR55_RS01125 PF00501 AMP-binding enzyme ACR55_RS01135 PF04185 Phosphoesterase family ACR55_RS01140 PF00005 ABC transporter ACR55_RS01145 PF00005 ABC transporter ACR55_RS01145 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS01155 PF13458 Periplasmic binding protein ACR55_RS01160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01160 PF03466 LysR substrate binding domain ACR55_RS01165 PF01810 LysE type translocator ACR55_RS01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01170 PF03466 LysR substrate binding domain ACR55_RS01180 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS01185 PF01168 Alanine racemase, N-terminal domain ACR55_RS01190 PF00155 Aminotransferase class I and II ACR55_RS01195 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS01205 PF00682 HMGL-like ACR55_RS01210 PF17782 DprA winged helix domain ACR55_RS01210 PF02481 DNA recombination-mediator protein A ACR55_RS01215 PF00072 Response regulator receiver domain ACR55_RS01215 PF00196 Bacterial regulatory proteins, luxR family ACR55_RS01220 PF07730 Histidine kinase ACR55_RS01220 PF17200 Single Cache domain 2 ACR55_RS01225 PF02554 Carbon starvation protein CstA ACR55_RS01225 PF13722 5TM C-terminal transporter carbon starvation CstA ACR55_RS01230 PF04328 Selenoprotein, putative ACR55_RS01235 PF01037 Lrp/AsnC ligand binding domain ACR55_RS01240 PF00266 Aminotransferase class-V ACR55_RS01245 PF01327 Polypeptide deformylase ACR55_RS01250 PF02911 Formyl transferase, C-terminal domain ACR55_RS01250 PF00551 Formyl transferase ACR55_RS01260 PF13419 Haloacid dehalogenase-like hydrolase ACR55_RS01270 PF03641 Possible lysine decarboxylase ACR55_RS01275 PF00682 HMGL-like ACR55_RS01280 PF02515 CoA-transferase family III ACR55_RS01285 PF00005 ABC transporter ACR55_RS01290 PF00005 ABC transporter ACR55_RS01290 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS01295 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS01300 PF13458 Periplasmic binding protein ACR55_RS01305 PF00732 GMC oxidoreductase ACR55_RS01305 PF05199 GMC oxidoreductase ACR55_RS01310 PF00171 Aldehyde dehydrogenase family ACR55_RS01315 PF03466 LysR substrate binding domain ACR55_RS01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01320 PF04055 Radical SAM superfamily ACR55_RS01320 PF18693 TRAM domain ACR55_RS01320 PF00919 Uncharacterized protein family UPF0004 ACR55_RS01345 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS01350 PF00561 alpha/beta hydrolase fold ACR55_RS01355 PF00743 Flavin-binding monooxygenase-like ACR55_RS01360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACR55_RS01360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACR55_RS01365 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS01370 PF02558 Ketopantoate reductase PanE/ApbA ACR55_RS01370 PF08546 Ketopantoate reductase PanE/ApbA C terminal ACR55_RS01375 PF00596 Class II Aldolase and Adducin N-terminal domain ACR55_RS01380 PF03466 LysR substrate binding domain ACR55_RS01380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01385 PF07690 Major Facilitator Superfamily ACR55_RS01390 PF03466 LysR substrate binding domain ACR55_RS01390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01395 PF01810 LysE type translocator ACR55_RS01400 PF01189 16S rRNA methyltransferase RsmB/F ACR55_RS01400 PF01029 NusB family ACR55_RS01410 PF00672 HAMP domain ACR55_RS01410 PF00989 PAS fold ACR55_RS01410 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS01415 PF02954 Bacterial regulatory protein, Fis family ACR55_RS01415 PF00072 Response regulator receiver domain ACR55_RS01415 PF00158 Sigma-54 interaction domain ACR55_RS01420 PF02080 TrkA-C domain ACR55_RS01420 PF02254 TrkA-N domain ACR55_RS01425 PF02386 Cation transport protein ACR55_RS01430 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACR55_RS01435 PF08241 Methyltransferase domain ACR55_RS01445 PF00588 SpoU rRNA Methylase family ACR55_RS01455 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACR55_RS01455 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACR55_RS01460 PF02556 Preprotein translocase subunit SecB ACR55_RS01465 PF00462 Glutaredoxin ACR55_RS01475 PF00300 Histidine phosphatase superfamily (branch 1) ACR55_RS01480 PF01551 Peptidase family M23 ACR55_RS01485 PF13180 PDZ domain ACR55_RS01485 PF03572 Peptidase family S41 ACR55_RS01490 PF00899 ThiF family ACR55_RS01500 PF02913 FAD linked oxidases, C-terminal domain ACR55_RS01500 PF01565 FAD binding domain ACR55_RS01505 PF00171 Aldehyde dehydrogenase family ACR55_RS01510 PF03741 Integral membrane protein TerC family ACR55_RS01525 PF01964 Radical SAM ThiC family ACR55_RS01525 PF13667 ThiC-associated domain ACR55_RS01530 PF02355 Protein export membrane protein ACR55_RS01530 PF07549 SecD/SecF GG Motif ACR55_RS01550 PF01472 PUA domain ACR55_RS01550 PF00696 Amino acid kinase family ACR55_RS01555 PF01018 GTP1/OBG ACR55_RS01555 PF01926 50S ribosome-binding GTPase ACR55_RS01560 PF01016 Ribosomal L27 protein ACR55_RS01565 PF00829 Ribosomal prokaryotic L21 protein ACR55_RS01570 PF00348 Polyprenyl synthetase ACR55_RS01595 PF01425 Amidase ACR55_RS01600 PF13458 Periplasmic binding protein ACR55_RS01605 PF03466 LysR substrate binding domain ACR55_RS01605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01615 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS01620 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS01620 PF00005 ABC transporter ACR55_RS01625 PF00005 ABC transporter ACR55_RS01630 PF01740 STAS domain ACR55_RS01630 PF00916 Sulfate permease family ACR55_RS01650 PF01979 Amidohydrolase family ACR55_RS01665 PF01488 Shikimate / quinate 5-dehydrogenase ACR55_RS01665 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACR55_RS01665 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACR55_RS01670 PF00472 RF-1 domain ACR55_RS01670 PF03462 PCRF domain ACR55_RS01675 PF05175 Methyltransferase small domain ACR55_RS01675 PF17827 PrmC N-terminal domain ACR55_RS01680 PF00462 Glutaredoxin ACR55_RS01685 PF02441 Flavoprotein ACR55_RS01695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACR55_RS01695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACR55_RS01700 PF13091 PLD-like domain ACR55_RS01705 PF00484 Carbonic anhydrase ACR55_RS01725 PF12146 Serine aminopeptidase, S33 ACR55_RS01735 PF02426 Muconolactone delta-isomerase ACR55_RS01740 PF01144 Coenzyme A transferase ACR55_RS01745 PF01144 Coenzyme A transferase ACR55_RS01750 PF01614 Bacterial transcriptional regulator ACR55_RS01750 PF09339 IclR helix-turn-helix domain ACR55_RS01760 PF02667 Short chain fatty acid transporter ACR55_RS01765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACR55_RS01765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACR55_RS01770 PF00311 Phosphoenolpyruvate carboxylase ACR55_RS01775 PF06508 Queuosine biosynthesis protein QueC ACR55_RS01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01790 PF03466 LysR substrate binding domain ACR55_RS01795 PF00920 Dehydratase family ACR55_RS01800 PF16970 Type-1 fimbrial protein, A ACR55_RS01810 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) ACR55_RS01820 PF02321 Outer membrane efflux protein ACR55_RS01825 PF00873 AcrB/AcrD/AcrF family ACR55_RS01830 PF13533 Biotin-lipoyl like ACR55_RS01835 PF03466 LysR substrate binding domain ACR55_RS01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01840 PF01594 AI-2E family transporter ACR55_RS01845 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ACR55_RS01850 PF04542 Sigma-70 region 2 ACR55_RS01850 PF08281 Sigma-70, region 4 ACR55_RS01855 PF04773 FecR protein ACR55_RS01855 PF16220 Domain of unknown function (DUF4880) ACR55_RS01860 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS01860 PF00593 TonB dependent receptor ACR55_RS01865 PF07885 Ion channel ACR55_RS01865 PF02254 TrkA-N domain ACR55_RS01880 PF00482 Type II secretion system (T2SS), protein F ACR55_RS01885 PF00263 Bacterial type II and III secretion system protein ACR55_RS01885 PF03958 Bacterial type II/III secretion system short domain ACR55_RS01890 PF00437 Type II/IV secretion system protein ACR55_RS01895 PF16970 Type-1 fimbrial protein, A ACR55_RS01920 PF11612 Type II secretion system (T2SS), protein J ACR55_RS01920 PF07963 Prokaryotic N-terminal methylation motif ACR55_RS01925 PF02501 Type II secretion system (T2SS), protein I ACR55_RS01925 PF07963 Prokaryotic N-terminal methylation motif ACR55_RS01930 PF12019 Type II transport protein GspH ACR55_RS01930 PF07963 Prokaryotic N-terminal methylation motif ACR55_RS01935 PF08334 Type II secretion system (T2SS), protein G ACR55_RS01935 PF07963 Prokaryotic N-terminal methylation motif ACR55_RS01945 PF00155 Aminotransferase class I and II ACR55_RS01950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS01955 PF00596 Class II Aldolase and Adducin N-terminal domain ACR55_RS01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS01960 PF03466 LysR substrate binding domain ACR55_RS01965 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS01970 PF00676 Dehydrogenase E1 component ACR55_RS01975 PF02779 Transketolase, pyrimidine binding domain ACR55_RS01975 PF02780 Transketolase, C-terminal domain ACR55_RS01980 PF01597 Glycine cleavage H-protein ACR55_RS01985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACR55_RS01985 PF00364 Biotin-requiring enzyme ACR55_RS01985 PF02817 e3 binding domain ACR55_RS02000 PF05199 GMC oxidoreductase ACR55_RS02000 PF00732 GMC oxidoreductase ACR55_RS02005 PF02954 Bacterial regulatory protein, Fis family ACR55_RS02005 PF00158 Sigma-54 interaction domain ACR55_RS02005 PF01590 GAF domain ACR55_RS02015 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ACR55_RS02015 PF03033 Glycosyltransferase family 28 N-terminal domain ACR55_RS02040 PF00589 Phage integrase family ACR55_RS02050 PF00860 Permease family ACR55_RS02055 PF00183 Hsp90 protein ACR55_RS02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS02060 PF07690 Major Facilitator Superfamily ACR55_RS02065 PF13378 Enolase C-terminal domain-like ACR55_RS02065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACR55_RS02070 PF01081 KDPG and KHG aldolase ACR55_RS02080 PF01614 Bacterial transcriptional regulator ACR55_RS02080 PF09339 IclR helix-turn-helix domain ACR55_RS02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02085 PF03466 LysR substrate binding domain ACR55_RS02090 PF07286 Protein of unknown function (DUF1445) ACR55_RS02100 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS02110 PF00005 ABC transporter ACR55_RS02110 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS02115 PF00005 ABC transporter ACR55_RS02120 PF00043 Glutathione S-transferase, C-terminal domain ACR55_RS02120 PF13417 Glutathione S-transferase, N-terminal domain ACR55_RS02125 PF01510 N-acetylmuramoyl-L-alanine amidase ACR55_RS02135 PF01578 Cytochrome C assembly protein ACR55_RS02140 PF02978 Signal peptide binding domain ACR55_RS02140 PF00448 SRP54-type protein, GTPase domain ACR55_RS02140 PF02881 SRP54-type protein, helical bundle domain ACR55_RS02150 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS02155 PF08402 TOBE domain ACR55_RS02155 PF00005 ABC transporter ACR55_RS02160 PF03466 LysR substrate binding domain ACR55_RS02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02170 PF04972 BON domain ACR55_RS02170 PF01476 LysM domain ACR55_RS02175 PF05690 Thiazole biosynthesis protein ThiG ACR55_RS02175 PF02597 ThiS family ACR55_RS02180 PF00561 alpha/beta hydrolase fold ACR55_RS02185 PF02390 Putative methyltransferase ACR55_RS02190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACR55_RS02195 PF03466 LysR substrate binding domain ACR55_RS02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02200 PF00171 Aldehyde dehydrogenase family ACR55_RS02205 PF01370 NAD dependent epimerase/dehydratase family ACR55_RS02210 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02220 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02225 PF03737 Aldolase/RraA ACR55_RS02230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS02230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS02235 PF01565 FAD binding domain ACR55_RS02235 PF02913 FAD linked oxidases, C-terminal domain ACR55_RS02250 PF13356 Arm DNA-binding domain ACR55_RS02250 PF00589 Phage integrase family ACR55_RS02270 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS02330 PF12833 Helix-turn-helix domain ACR55_RS02330 PF02311 AraC-like ligand binding domain ACR55_RS02335 PF00694 Aconitase C-terminal domain ACR55_RS02340 PF00330 Aconitase family (aconitate hydratase) ACR55_RS02345 PF00561 alpha/beta hydrolase fold ACR55_RS02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02350 PF03466 LysR substrate binding domain ACR55_RS02365 PF03466 LysR substrate binding domain ACR55_RS02365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02370 PF00557 Metallopeptidase family M24 ACR55_RS02385 PF03466 LysR substrate binding domain ACR55_RS02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02390 PF00561 alpha/beta hydrolase fold ACR55_RS02395 PF00561 alpha/beta hydrolase fold ACR55_RS02400 PF09278 MerR, DNA binding ACR55_RS02400 PF00376 MerR family regulatory protein ACR55_RS02405 PF00665 Integrase core domain ACR55_RS02405 PF13333 Integrase core domain ACR55_RS02405 PF13276 HTH-like domain ACR55_RS02415 PF07690 Major Facilitator Superfamily ACR55_RS02420 PF03466 LysR substrate binding domain ACR55_RS02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02480 PF13614 AAA domain ACR55_RS02500 PF07804 HipA-like C-terminal domain ACR55_RS02520 PF11855 Protein of unknown function (DUF3375) ACR55_RS02540 PF00884 Sulfatase ACR55_RS02560 PF00743 Flavin-binding monooxygenase-like ACR55_RS02565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02565 PF03466 LysR substrate binding domain ACR55_RS02570 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02575 PF02615 Malate/L-lactate dehydrogenase ACR55_RS02585 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02590 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02605 PF00106 short chain dehydrogenase ACR55_RS02615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS02615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS02615 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS02620 PF13380 CoA binding domain ACR55_RS02620 PF13607 Succinyl-CoA ligase like flavodoxin domain ACR55_RS02625 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS02630 PF08450 SMP-30/Gluconolactonase/LRE-like region ACR55_RS02635 PF03466 LysR substrate binding domain ACR55_RS02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02640 PF00296 Luciferase-like monooxygenase ACR55_RS02645 PF01613 Flavin reductase like domain ACR55_RS02645 PF00753 Metallo-beta-lactamase superfamily ACR55_RS02650 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02655 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02665 PF07859 alpha/beta hydrolase fold ACR55_RS02670 PF00881 Nitroreductase family ACR55_RS02680 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02690 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ACR55_RS02690 PF00890 FAD binding domain ACR55_RS02695 PF03466 LysR substrate binding domain ACR55_RS02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02705 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS02710 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS02710 PF00155 Aminotransferase class I and II ACR55_RS02715 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02720 PF01168 Alanine racemase, N-terminal domain ACR55_RS02725 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02730 PF02515 CoA-transferase family III ACR55_RS02740 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS02740 PF17932 Tetracyclin repressor-like, C-terminal domain ACR55_RS02745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS02745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS02745 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS02750 PF00202 Aminotransferase class-III ACR55_RS02760 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02770 PF02798 Glutathione S-transferase, N-terminal domain ACR55_RS02770 PF00043 Glutathione S-transferase, C-terminal domain ACR55_RS02780 PF03466 LysR substrate binding domain ACR55_RS02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02785 PF00005 ABC transporter ACR55_RS02790 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS02795 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS02800 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS02810 PF01053 Cys/Met metabolism PLP-dependent enzyme ACR55_RS02820 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS02825 PF02515 CoA-transferase family III ACR55_RS02830 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS02835 PF03466 LysR substrate binding domain ACR55_RS02845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS02845 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS02845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS02850 PF02423 Ornithine cyclodeaminase/mu-crystallin family ACR55_RS02865 PF00753 Metallo-beta-lactamase superfamily ACR55_RS02870 PF12697 Alpha/beta hydrolase family ACR55_RS02870 PF08241 Methyltransferase domain ACR55_RS02880 PF00005 ABC transporter ACR55_RS02885 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS02885 PF00005 ABC transporter ACR55_RS02895 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS02900 PF13458 Periplasmic binding protein ACR55_RS02905 PF02627 Carboxymuconolactone decarboxylase family ACR55_RS02910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACR55_RS02910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACR55_RS02915 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS02920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS02935 PF01266 FAD dependent oxidoreductase ACR55_RS02940 PF04324 BFD-like [2Fe-2S] binding domain ACR55_RS02940 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS02950 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS02960 PF08402 TOBE domain ACR55_RS02960 PF00005 ABC transporter ACR55_RS02975 PF00491 Arginase family ACR55_RS02980 PF16970 Type-1 fimbrial protein, A ACR55_RS03005 PF00581 Rhodanese-like domain ACR55_RS03005 PF17773 UPF0176 acylphosphatase like domain ACR55_RS03010 PF09334 tRNA synthetases class I (M) ACR55_RS03010 PF01588 Putative tRNA binding domain ACR55_RS03020 PF10609 NUBPL iron-transfer P-loop NTPase ACR55_RS03035 PF00692 dUTPase ACR55_RS03040 PF00583 Acetyltransferase (GNAT) family ACR55_RS03040 PF00814 Glycoprotease family ACR55_RS03050 PF01276 Orn/Lys/Arg decarboxylase, major domain ACR55_RS03050 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ACR55_RS03050 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ACR55_RS03060 PF00356 Bacterial regulatory proteins, lacI family ACR55_RS03065 PF13458 Periplasmic binding protein ACR55_RS03070 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS03075 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS03075 PF00005 ABC transporter ACR55_RS03080 PF00005 ABC transporter ACR55_RS03095 PF00465 Iron-containing alcohol dehydrogenase ACR55_RS03100 PF00107 Zinc-binding dehydrogenase ACR55_RS03100 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS03105 PF01571 Aminomethyltransferase folate-binding domain ACR55_RS03105 PF08669 Glycine cleavage T-protein C-terminal barrel domain ACR55_RS03110 PF01597 Glycine cleavage H-protein ACR55_RS03115 PF02347 Glycine cleavage system P-protein ACR55_RS03120 PF06097 Bacterial protein of unknown function (DUF945) ACR55_RS03135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS03135 PF00005 ABC transporter ACR55_RS03140 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS03145 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS03150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS03160 PF00171 Aldehyde dehydrogenase family ACR55_RS03165 PF00202 Aminotransferase class-III ACR55_RS03170 PF00155 Aminotransferase class I and II ACR55_RS03175 PF00186 Dihydrofolate reductase ACR55_RS03180 PF00303 Thymidylate synthase ACR55_RS03190 PF03232 Ubiquinone biosynthesis protein COQ7 ACR55_RS03195 PF00953 Glycosyl transferase family 4 ACR55_RS03200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACR55_RS03200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACR55_RS03200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACR55_RS03205 PF01370 NAD dependent epimerase/dehydratase family ACR55_RS03210 PF03023 Lipid II flippase MurJ ACR55_RS03215 PF13439 Glycosyltransferase Family 4 ACR55_RS03215 PF00534 Glycosyl transferases group 1 ACR55_RS03220 PF00733 Asparagine synthase ACR55_RS03220 PF13537 Glutamine amidotransferase domain ACR55_RS03225 PF00534 Glycosyl transferases group 1 ACR55_RS03225 PF13439 Glycosyltransferase Family 4 ACR55_RS03230 PF13439 Glycosyltransferase Family 4 ACR55_RS03230 PF00534 Glycosyl transferases group 1 ACR55_RS03235 PF13477 Glycosyl transferase 4-like ACR55_RS03235 PF00534 Glycosyl transferases group 1 ACR55_RS03240 PF00342 Phosphoglucose isomerase ACR55_RS03245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACR55_RS03245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACR55_RS03245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACR55_RS03245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACR55_RS03255 PF01565 FAD binding domain ACR55_RS03255 PF02913 FAD linked oxidases, C-terminal domain ACR55_RS03260 PF00072 Response regulator receiver domain ACR55_RS03260 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS03265 PF00672 HAMP domain ACR55_RS03265 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS03270 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS03270 PF07729 FCD domain ACR55_RS03275 PF00884 Sulfatase ACR55_RS03285 PF04209 homogentisate 1,2-dioxygenase ACR55_RS03290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS03290 PF03466 LysR substrate binding domain ACR55_RS03300 PF01494 FAD binding domain ACR55_RS03310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACR55_RS03310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACR55_RS03310 PF06827 Zinc finger found in FPG and IleRS ACR55_RS03320 PF03550 Outer membrane lipoprotein LolB ACR55_RS03325 PF00288 GHMP kinases N terminal domain ACR55_RS03325 PF08544 GHMP kinases C terminal ACR55_RS03335 PF14572 Phosphoribosyl synthetase-associated domain ACR55_RS03335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACR55_RS03340 PF01386 Ribosomal L25p family ACR55_RS03340 PF14693 Ribosomal protein TL5, C-terminal domain ACR55_RS03345 PF01195 Peptidyl-tRNA hydrolase ACR55_RS03355 PF01926 50S ribosome-binding GTPase ACR55_RS03355 PF06071 Protein of unknown function (DUF933) ACR55_RS03360 PF13356 Arm DNA-binding domain ACR55_RS03360 PF00589 Phage integrase family ACR55_RS03370 PF00270 DEAD/DEAH box helicase ACR55_RS03370 PF09369 Domain of unknown function (DUF1998) ACR55_RS03370 PF00271 Helicase conserved C-terminal domain ACR55_RS03375 PF18337 RapA N-terminal Tudor like domain ACR55_RS03375 PF18339 RapA N-terminal Tudor like domain 1 ACR55_RS03375 PF00176 SNF2 family N-terminal domain ACR55_RS03375 PF12137 RNA polymerase recycling family C-terminal ACR55_RS03375 PF00271 Helicase conserved C-terminal domain ACR55_RS03435 PF00589 Phage integrase family ACR55_RS03435 PF13356 Arm DNA-binding domain ACR55_RS03450 PF02384 N-6 DNA Methylase ACR55_RS03455 PF01420 Type I restriction modification DNA specificity domain ACR55_RS03470 PF18766 SWI2/SNF2 ATPase ACR55_RS03470 PF11867 Domain of unknown function (DUF3387) ACR55_RS03470 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ACR55_RS03500 PF07690 Major Facilitator Superfamily ACR55_RS03505 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS03520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS03520 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS03520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS03525 PF00682 HMGL-like ACR55_RS03530 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS03535 PF02515 CoA-transferase family III ACR55_RS03545 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS03550 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS03560 PF00593 TonB dependent receptor ACR55_RS03560 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS03580 PF03594 Benzoate membrane transport protein ACR55_RS03585 PF00037 4Fe-4S binding domain ACR55_RS03590 PF01467 Cytidylyltransferase-like ACR55_RS03600 PF00448 SRP54-type protein, GTPase domain ACR55_RS03600 PF02881 SRP54-type protein, helical bundle domain ACR55_RS03610 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS03615 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS03620 PF00005 ABC transporter ACR55_RS03630 PF03466 LysR substrate binding domain ACR55_RS03630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS03635 PF00106 short chain dehydrogenase ACR55_RS03645 PF05378 Hydantoinase/oxoprolinase N-terminal region ACR55_RS03645 PF01968 Hydantoinase/oxoprolinase ACR55_RS03650 PF00005 ABC transporter ACR55_RS03655 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS03655 PF00005 ABC transporter ACR55_RS03660 PF11862 Domain of unknown function (DUF3382) ACR55_RS03660 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS03665 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS03690 PF00925 GTP cyclohydrolase II ACR55_RS03690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACR55_RS03695 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACR55_RS03700 PF01029 NusB family ACR55_RS03705 PF00586 AIR synthase related protein, N-terminal domain ACR55_RS03705 PF02769 AIR synthase related protein, C-terminal domain ACR55_RS03710 PF04608 Phosphatidylglycerophosphatase A ACR55_RS03715 PF02464 Competence-damaged protein ACR55_RS03720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACR55_RS03725 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS03730 PF01219 Prokaryotic diacylglycerol kinase ACR55_RS03740 PF00118 TCP-1/cpn60 chaperonin family ACR55_RS03745 PF00166 Chaperonin 10 Kd subunit ACR55_RS03765 PF00815 Histidinol dehydrogenase ACR55_RS03775 PF00356 Bacterial regulatory proteins, lacI family ACR55_RS03780 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS03785 PF03328 HpcH/HpaI aldolase/citrate lyase family ACR55_RS03795 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS03800 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS03805 PF00005 ABC transporter ACR55_RS03805 PF08402 TOBE domain ACR55_RS03810 PF00356 Bacterial regulatory proteins, lacI family ACR55_RS03820 PF08241 Methyltransferase domain ACR55_RS03820 PF12697 Alpha/beta hydrolase family ACR55_RS03835 PF00166 Chaperonin 10 Kd subunit ACR55_RS03840 PF00118 TCP-1/cpn60 chaperonin family ACR55_RS03855 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACR55_RS03860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACR55_RS03865 PF00171 Aldehyde dehydrogenase family ACR55_RS03870 PF01042 Endoribonuclease L-PSP ACR55_RS03875 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS03880 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS03885 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACR55_RS03885 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ACR55_RS03890 PF07836 DmpG-like communication domain ACR55_RS03890 PF00682 HMGL-like ACR55_RS03895 PF00753 Metallo-beta-lactamase superfamily ACR55_RS03900 PF07859 alpha/beta hydrolase fold ACR55_RS03915 PF07995 Glucose / Sorbosone dehydrogenase ACR55_RS03925 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS03940 PF08281 Sigma-70, region 4 ACR55_RS03940 PF04542 Sigma-70 region 2 ACR55_RS03950 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS03950 PF00593 TonB dependent receptor ACR55_RS03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS03965 PF03466 LysR substrate binding domain ACR55_RS03975 PF12680 SnoaL-like domain ACR55_RS03975 PF08281 Sigma-70, region 4 ACR55_RS03975 PF04542 Sigma-70 region 2 ACR55_RS03985 PF00271 Helicase conserved C-terminal domain ACR55_RS03985 PF00270 DEAD/DEAH box helicase ACR55_RS03985 PF03880 DbpA RNA binding domain ACR55_RS03990 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS03990 PF07729 FCD domain ACR55_RS03995 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS03995 PF07729 FCD domain ACR55_RS04000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACR55_RS04000 PF00205 Thiamine pyrophosphate enzyme, central domain ACR55_RS04000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACR55_RS04010 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS04010 PF11862 Domain of unknown function (DUF3382) ACR55_RS04015 PF00005 ABC transporter ACR55_RS04015 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS04020 PF00005 ABC transporter ACR55_RS04025 PF13458 Periplasmic binding protein ACR55_RS04030 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS04030 PF00107 Zinc-binding dehydrogenase ACR55_RS04045 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS04055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS04055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS04055 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS04065 PF01144 Coenzyme A transferase ACR55_RS04070 PF01144 Coenzyme A transferase ACR55_RS04075 PF02627 Carboxymuconolactone decarboxylase family ACR55_RS04080 PF10397 Adenylosuccinate lyase C-terminus ACR55_RS04080 PF00206 Lyase ACR55_RS04090 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ACR55_RS04090 PF00775 Dioxygenase ACR55_RS04095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS04095 PF03466 LysR substrate binding domain ACR55_RS04100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ACR55_RS04105 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ACR55_RS04110 PF01220 Dehydroquinase class II ACR55_RS04115 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS04120 PF01614 Bacterial transcriptional regulator ACR55_RS04120 PF09339 IclR helix-turn-helix domain ACR55_RS04125 PF03466 LysR substrate binding domain ACR55_RS04125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS04130 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS04135 PF01494 FAD binding domain ACR55_RS04140 PF00083 Sugar (and other) transporter ACR55_RS04140 PF07690 Major Facilitator Superfamily ACR55_RS04145 PF00795 Carbon-nitrogen hydrolase ACR55_RS04150 PF17645 Arylmalonate decarboxylase ACR55_RS04160 PF00199 Catalase ACR55_RS04160 PF06628 Catalase-related immune-responsive ACR55_RS04170 PF00196 Bacterial regulatory proteins, luxR family ACR55_RS04170 PF00072 Response regulator receiver domain ACR55_RS04175 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS04175 PF00072 Response regulator receiver domain ACR55_RS04175 PF08448 PAS fold ACR55_RS04175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS04175 PF13426 PAS domain ACR55_RS04180 PF07687 Peptidase dimerisation domain ACR55_RS04180 PF01546 Peptidase family M20/M25/M40 ACR55_RS04185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS04185 PF00005 ABC transporter ACR55_RS04190 PF00005 ABC transporter ACR55_RS04190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS04195 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS04205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS04210 PF07729 FCD domain ACR55_RS04210 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS04215 PF00266 Aminotransferase class-V ACR55_RS04230 PF03737 Aldolase/RraA ACR55_RS04240 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS04245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS04245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS04255 PF03328 HpcH/HpaI aldolase/citrate lyase family ACR55_RS04260 PF04304 Protein of unknown function (DUF454) ACR55_RS04275 PF00654 Voltage gated chloride channel ACR55_RS04280 PF07943 Penicillin-binding protein 5, C-terminal domain ACR55_RS04280 PF00768 D-alanyl-D-alanine carboxypeptidase ACR55_RS04290 PF05974 Domain of unknown function (DUF892) ACR55_RS04300 PF00884 Sulfatase ACR55_RS04305 PF01425 Amidase ACR55_RS04310 PF00005 ABC transporter ACR55_RS04315 PF00005 ABC transporter ACR55_RS04315 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS04320 PF11862 Domain of unknown function (DUF3382) ACR55_RS04320 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS04325 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS04335 PF02515 CoA-transferase family III ACR55_RS04340 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS04350 PF00202 Aminotransferase class-III ACR55_RS04355 PF07729 FCD domain ACR55_RS04355 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS04360 PF03466 LysR substrate binding domain ACR55_RS04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS04365 PF00535 Glycosyl transferase family 2 ACR55_RS04370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS04375 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS04380 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS04380 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS04385 PF00005 ABC transporter ACR55_RS04385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS04390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS04390 PF00005 ABC transporter ACR55_RS04405 PF12848 ABC transporter ACR55_RS04405 PF00005 ABC transporter ACR55_RS04420 PF03776 Septum formation topological specificity factor MinE ACR55_RS04425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACR55_RS04430 PF05209 Septum formation inhibitor MinC, N-terminal domain ACR55_RS04430 PF03775 Septum formation inhibitor MinC, C-terminal domain ACR55_RS04435 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACR55_RS04435 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ACR55_RS04445 PF02322 Cytochrome bd terminal oxidase subunit II ACR55_RS04455 PF00072 Response regulator receiver domain ACR55_RS04455 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS04465 PF00270 DEAD/DEAH box helicase ACR55_RS04465 PF09382 RQC domain ACR55_RS04465 PF16124 RecQ zinc-binding ACR55_RS04465 PF00271 Helicase conserved C-terminal domain ACR55_RS04465 PF00570 HRDC domain ACR55_RS04470 PF17864 RuvB AAA lid domain ACR55_RS04470 PF05491 RuvB C-terminal winged helix domain ACR55_RS04470 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACR55_RS04475 PF01370 NAD dependent epimerase/dehydratase family ACR55_RS04485 PF01330 RuvA N terminal domain ACR55_RS04485 PF07499 RuvA, C-terminal domain ACR55_RS04490 PF02075 Crossover junction endodeoxyribonuclease RuvC ACR55_RS04495 PF01808 AICARFT/IMPCHase bienzyme ACR55_RS04495 PF02142 MGS-like domain ACR55_RS04500 PF02954 Bacterial regulatory protein, Fis family ACR55_RS04505 PF01207 Dihydrouridine synthase (Dus) ACR55_RS04510 PF01494 FAD binding domain ACR55_RS04520 PF05195 Aminopeptidase P, N-terminal domain ACR55_RS04520 PF00557 Metallopeptidase family M24 ACR55_RS04535 PF00690 Cation transporter/ATPase, N-terminus ACR55_RS04535 PF00689 Cation transporting ATPase, C-terminus ACR55_RS04540 PF13609 Gram-negative porin ACR55_RS04550 PF00483 Nucleotidyl transferase ACR55_RS04555 PF13181 Tetratricopeptide repeat ACR55_RS04555 PF01435 Peptidase family M48 ACR55_RS04560 PF00561 alpha/beta hydrolase fold ACR55_RS04585 PF00270 DEAD/DEAH box helicase ACR55_RS04585 PF00271 Helicase conserved C-terminal domain ACR55_RS04600 PF00994 Probable molybdopterin binding domain ACR55_RS04600 PF18146 Damage-inducible protein CinA KH domain ACR55_RS04600 PF02464 Competence-damaged protein ACR55_RS04605 PF09339 IclR helix-turn-helix domain ACR55_RS04605 PF01614 Bacterial transcriptional regulator ACR55_RS04610 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS04620 PF01180 Dihydroorotate dehydrogenase ACR55_RS04625 PF04377 Arginine-tRNA-protein transferase, C terminus ACR55_RS04625 PF04376 Arginine-tRNA-protein transferase, N terminus ACR55_RS04630 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ACR55_RS04640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS04640 PF03466 LysR substrate binding domain ACR55_RS04675 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACR55_RS04675 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACR55_RS04680 PF00857 Isochorismatase family ACR55_RS04685 PF01979 Amidohydrolase family ACR55_RS04690 PF00694 Aconitase C-terminal domain ACR55_RS04690 PF00330 Aconitase family (aconitate hydratase) ACR55_RS04695 PF07729 FCD domain ACR55_RS04695 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS04715 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS04720 PF01810 LysE type translocator ACR55_RS04725 PF04303 PrpF protein ACR55_RS04730 PF00694 Aconitase C-terminal domain ACR55_RS04730 PF00330 Aconitase family (aconitate hydratase) ACR55_RS04740 PF03466 LysR substrate binding domain ACR55_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS04750 PF13098 Thioredoxin-like domain ACR55_RS04755 PF00578 AhpC/TSA family ACR55_RS04770 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACR55_RS04770 PF01565 FAD binding domain ACR55_RS04775 PF01113 Dihydrodipicolinate reductase, N-terminus ACR55_RS04775 PF05173 Dihydrodipicolinate reductase, C-terminus ACR55_RS04780 PF04355 SmpA / OmlA family ACR55_RS04785 PF01475 Ferric uptake regulator family ACR55_RS04790 PF02463 RecF/RecN/SMC N terminal domain ACR55_RS04795 PF01513 ATP-NAD kinase ACR55_RS04800 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ACR55_RS04800 PF01628 HrcA protein C terminal domain ACR55_RS04805 PF00762 Ferrochelatase ACR55_RS04815 PF01025 GrpE ACR55_RS04825 PF00012 Hsp70 protein ACR55_RS04830 PF00684 DnaJ central domain ACR55_RS04830 PF01556 DnaJ C terminal domain ACR55_RS04830 PF00226 DnaJ domain ACR55_RS04835 PF00675 Insulinase (Peptidase family M16) ACR55_RS04835 PF05193 Peptidase M16 inactive domain ACR55_RS04850 PF01434 Peptidase family M41 ACR55_RS04850 PF17862 AAA+ lid domain ACR55_RS04850 PF00004 ATPase family associated with various cellular activities (AAA) ACR55_RS04855 PF00034 Cytochrome c ACR55_RS04870 PF00180 Isocitrate/isopropylmalate dehydrogenase ACR55_RS04875 PF00701 Dihydrodipicolinate synthetase family ACR55_RS04890 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS04890 PF00072 Response regulator receiver domain ACR55_RS04895 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS04895 PF02702 Osmosensitive K+ channel His kinase sensor domain ACR55_RS04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS04895 PF13493 Domain of unknown function (DUF4118) ACR55_RS04895 PF13492 GAF domain ACR55_RS04900 PF02669 K+-transporting ATPase, c chain ACR55_RS04910 PF03814 Potassium-transporting ATPase A subunit ACR55_RS04925 PF00474 Sodium:solute symporter family ACR55_RS04930 PF00893 Small Multidrug Resistance protein ACR55_RS04935 PF01713 Smr domain ACR55_RS04935 PF00488 MutS domain V ACR55_RS04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS04945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ACR55_RS04945 PF17854 FtsK alpha domain ACR55_RS04945 PF09397 Ftsk gamma domain ACR55_RS04945 PF01580 FtsK/SpoIIIE family ACR55_RS04950 PF03548 Outer membrane lipoprotein carrier protein LolA ACR55_RS04955 PF01042 Endoribonuclease L-PSP ACR55_RS04960 PF07969 Amidohydrolase family ACR55_RS04965 PF00571 CBS domain ACR55_RS04965 PF01380 SIS domain ACR55_RS04970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS04970 PF00005 ABC transporter ACR55_RS04975 PF00005 ABC transporter ACR55_RS04975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS04980 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS04980 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS04990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS05000 PF00004 ATPase family associated with various cellular activities (AAA) ACR55_RS05000 PF16193 AAA C-terminal domain ACR55_RS05000 PF12002 MgsA AAA+ ATPase C terminal ACR55_RS05010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACR55_RS05010 PF02403 Seryl-tRNA synthetase N-terminal domain ACR55_RS05020 PF13185 GAF domain ACR55_RS05020 PF00563 EAL domain ACR55_RS05020 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS05030 PF01914 MarC family integral membrane protein ACR55_RS05035 PF03466 LysR substrate binding domain ACR55_RS05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS05040 PF07690 Major Facilitator Superfamily ACR55_RS05045 PF03976 Polyphosphate kinase 2 (PPK2) ACR55_RS05050 PF00593 TonB dependent receptor ACR55_RS05050 PF07660 Secretin and TonB N terminus short domain ACR55_RS05050 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS05065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS05065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS05075 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS05080 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS05080 PF14759 Reductase C-terminal ACR55_RS05085 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS05090 PF00866 Ring hydroxylating beta subunit ACR55_RS05095 PF00355 Rieske [2Fe-2S] domain ACR55_RS05095 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACR55_RS05100 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS05100 PF07729 FCD domain ACR55_RS05115 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS05135 PF02254 TrkA-N domain ACR55_RS05135 PF00999 Sodium/hydrogen exchanger family ACR55_RS05140 PF00106 short chain dehydrogenase ACR55_RS05145 PF03883 Peroxide stress protein YaaA ACR55_RS05150 PF12805 FUSC-like inner membrane protein yccS ACR55_RS05155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACR55_RS05155 PF00205 Thiamine pyrophosphate enzyme, central domain ACR55_RS05155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACR55_RS05160 PF10369 Small subunit of acetolactate synthase ACR55_RS05165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACR55_RS05165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACR55_RS05170 PF01066 CDP-alcohol phosphatidyltransferase ACR55_RS05180 PF00312 Ribosomal protein S15 ACR55_RS05185 PF03725 3' exoribonuclease family, domain 2 ACR55_RS05185 PF00575 S1 RNA binding domain ACR55_RS05185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACR55_RS05185 PF01138 3' exoribonuclease family, domain 1 ACR55_RS05185 PF00013 KH domain ACR55_RS05195 PF01042 Endoribonuclease L-PSP ACR55_RS05200 PF01168 Alanine racemase, N-terminal domain ACR55_RS05200 PF14031 Putative serine dehydratase domain ACR55_RS05205 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS05215 PF03466 LysR substrate binding domain ACR55_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS05220 PF00291 Pyridoxal-phosphate dependent enzyme ACR55_RS05220 PF13291 ACT domain ACR55_RS05245 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS05245 PF00550 Phosphopantetheine attachment site ACR55_RS05245 PF08659 KR domain ACR55_RS05245 PF14765 Polyketide synthase dehydratase ACR55_RS05245 PF00698 Acyl transferase domain ACR55_RS05250 PF00121 Triosephosphate isomerase ACR55_RS05255 PF03840 Preprotein translocase SecG subunit ACR55_RS05260 PF13439 Glycosyltransferase Family 4 ACR55_RS05260 PF00534 Glycosyl transferases group 1 ACR55_RS05265 PF01497 Periplasmic binding protein ACR55_RS05270 PF01032 FecCD transport family ACR55_RS05275 PF01032 FecCD transport family ACR55_RS05280 PF00005 ABC transporter ACR55_RS05300 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS05325 PF07729 FCD domain ACR55_RS05325 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS05330 PF02515 CoA-transferase family III ACR55_RS05335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS05335 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS05335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS05345 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS05365 PF02515 CoA-transferase family III ACR55_RS05370 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS05385 PF09339 IclR helix-turn-helix domain ACR55_RS05385 PF01614 Bacterial transcriptional regulator ACR55_RS05395 PF00563 EAL domain ACR55_RS05395 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS05395 PF13426 PAS domain ACR55_RS05410 PF01810 LysE type translocator ACR55_RS05425 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS05430 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS05435 PF00005 ABC transporter ACR55_RS05435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS05445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS05450 PF00999 Sodium/hydrogen exchanger family ACR55_RS05465 PF00171 Aldehyde dehydrogenase family ACR55_RS05475 PF02625 XdhC and CoxI family ACR55_RS05475 PF13478 XdhC Rossmann domain ACR55_RS05480 PF12804 MobA-like NTP transferase domain ACR55_RS05480 PF00132 Bacterial transferase hexapeptide (six repeats) ACR55_RS05485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ACR55_RS05490 PF01799 [2Fe-2S] binding domain ACR55_RS05490 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS05515 PF01546 Peptidase family M20/M25/M40 ACR55_RS05515 PF07687 Peptidase dimerisation domain ACR55_RS05530 PF01042 Endoribonuclease L-PSP ACR55_RS05540 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS05545 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS05555 PF00005 ABC transporter ACR55_RS05560 PF13416 Bacterial extracellular solute-binding protein ACR55_RS05565 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS05570 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS05575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS05580 PF01220 Dehydroquinase class II ACR55_RS05590 PF00698 Acyl transferase domain ACR55_RS05590 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS05590 PF08659 KR domain ACR55_RS05590 PF00550 Phosphopantetheine attachment site ACR55_RS05590 PF14765 Polyketide synthase dehydratase ACR55_RS05595 PF00005 ABC transporter ACR55_RS05595 PF08402 TOBE domain ACR55_RS05605 PF04542 Sigma-70 region 2 ACR55_RS05605 PF08281 Sigma-70, region 4 ACR55_RS05610 PF13091 PLD-like domain ACR55_RS05610 PF13396 Phospholipase_D-nuclease N-terminal ACR55_RS05620 PF13302 Acetyltransferase (GNAT) domain ACR55_RS05630 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS05635 PF08450 SMP-30/Gluconolactonase/LRE-like region ACR55_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS05650 PF03466 LysR substrate binding domain ACR55_RS05655 PF02627 Carboxymuconolactone decarboxylase family ACR55_RS05680 PF04228 Putative neutral zinc metallopeptidase ACR55_RS05685 PF01300 Telomere recombination ACR55_RS05690 PF02163 Peptidase family M50 ACR55_RS05695 PF00701 Dihydrodipicolinate synthetase family ACR55_RS05700 PF06804 NlpB/DapX lipoprotein ACR55_RS05710 PF08007 Cupin superfamily protein ACR55_RS05715 PF05188 MutS domain II ACR55_RS05715 PF05192 MutS domain III ACR55_RS05715 PF01624 MutS domain I ACR55_RS05715 PF05190 MutS family domain IV ACR55_RS05715 PF00488 MutS domain V ACR55_RS05725 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS05725 PF00107 Zinc-binding dehydrogenase ACR55_RS05730 PF03466 LysR substrate binding domain ACR55_RS05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS05735 PF07311 Dodecin ACR55_RS05740 PF03358 NADPH-dependent FMN reductase ACR55_RS05755 PF07729 FCD domain ACR55_RS05755 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS05760 PF01425 Amidase ACR55_RS05770 PF12857 TOBE-like domain ACR55_RS05770 PF00005 ABC transporter ACR55_RS05775 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS05780 PF09084 NMT1/THI5 like ACR55_RS05805 PF05552 Conserved TM helix ACR55_RS05805 PF00924 Mechanosensitive ion channel ACR55_RS05815 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS05820 PF00588 SpoU rRNA Methylase family ACR55_RS05825 PF00459 Inositol monophosphatase family ACR55_RS05830 PF03471 Transporter associated domain ACR55_RS05830 PF03741 Integral membrane protein TerC family ACR55_RS05835 PF02673 Bacitracin resistance protein BacA ACR55_RS05840 PF00149 Calcineurin-like phosphoesterase ACR55_RS05845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACR55_RS05855 PF09190 DALR domain ACR55_RS05855 PF01406 tRNA synthetases class I (C) catalytic domain ACR55_RS05860 PF12833 Helix-turn-helix domain ACR55_RS05860 PF00730 HhH-GPD superfamily base excision DNA repair protein ACR55_RS05860 PF06029 AlkA N-terminal domain ACR55_RS05860 PF02805 Metal binding domain of Ada ACR55_RS05865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ACR55_RS05870 PF01171 PP-loop family ACR55_RS05870 PF09179 TilS substrate binding domain ACR55_RS05875 PF13840 ACT domain ACR55_RS05875 PF01842 ACT domain ACR55_RS05875 PF00696 Amino acid kinase family ACR55_RS05885 PF00664 ABC transporter transmembrane region ACR55_RS05885 PF00005 ABC transporter ACR55_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS05890 PF03466 LysR substrate binding domain ACR55_RS05900 PF07690 Major Facilitator Superfamily ACR55_RS05905 PF00593 TonB dependent receptor ACR55_RS05905 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS05915 PF13360 PQQ-like domain ACR55_RS05915 PF01011 PQQ enzyme repeat ACR55_RS05930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACR55_RS05930 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS05935 PF09339 IclR helix-turn-helix domain ACR55_RS05935 PF01614 Bacterial transcriptional regulator ACR55_RS05940 PF13380 CoA binding domain ACR55_RS05945 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS05950 PF01042 Endoribonuclease L-PSP ACR55_RS05975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACR55_RS05985 PF00501 AMP-binding enzyme ACR55_RS05985 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS06000 PF00108 Thiolase, N-terminal domain ACR55_RS06000 PF02803 Thiolase, C-terminal domain ACR55_RS06005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACR55_RS06005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACR55_RS06005 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS06010 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ACR55_RS06015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACR55_RS06015 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS06015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACR55_RS06020 PF00108 Thiolase, N-terminal domain ACR55_RS06020 PF02803 Thiolase, C-terminal domain ACR55_RS06025 PF09317 Domain of unknown function (DUF1974) ACR55_RS06025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS06025 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS06025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS06030 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS06035 PF00132 Bacterial transferase hexapeptide (six repeats) ACR55_RS06045 PF02146 Sir2 family ACR55_RS06050 PF00459 Inositol monophosphatase family ACR55_RS06055 PF00171 Aldehyde dehydrogenase family ACR55_RS06060 PF00202 Aminotransferase class-III ACR55_RS06065 PF00155 Aminotransferase class I and II ACR55_RS06065 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS06075 PF00580 UvrD/REP helicase N-terminal domain ACR55_RS06075 PF13361 UvrD-like helicase C-terminal domain ACR55_RS06080 PF01544 CorA-like Mg2+ transporter protein ACR55_RS06085 PF00565 Staphylococcal nuclease homologue ACR55_RS06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS06095 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS06100 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS06100 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS06105 PF00005 ABC transporter ACR55_RS06105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS06115 PF03466 LysR substrate binding domain ACR55_RS06115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS06120 PF03788 LrgA family ACR55_RS06125 PF04172 LrgB-like family ACR55_RS06140 PF00210 Ferritin-like domain ACR55_RS06165 PF00072 Response regulator receiver domain ACR55_RS06170 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACR55_RS06170 PF06481 COX Aromatic Rich Motif ACR55_RS06175 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACR55_RS06180 PF00510 Cytochrome c oxidase subunit III ACR55_RS06185 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ACR55_RS06190 PF02678 Pirin ACR55_RS06190 PF05726 Pirin C-terminal cupin domain ACR55_RS06200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS06200 PF13426 PAS domain ACR55_RS06200 PF08447 PAS fold ACR55_RS06205 PF01476 LysM domain ACR55_RS06205 PF01551 Peptidase family M23 ACR55_RS06215 PF04461 Protein of unknown function (DUF520) ACR55_RS06220 PF00005 ABC transporter ACR55_RS06225 PF00005 ABC transporter ACR55_RS06235 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS06245 PF01425 Amidase ACR55_RS06250 PF02785 Biotin carboxylase C-terminal domain ACR55_RS06250 PF00289 Biotin carboxylase, N-terminal domain ACR55_RS06250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACR55_RS06250 PF00364 Biotin-requiring enzyme ACR55_RS06255 PF07729 FCD domain ACR55_RS06255 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS06265 PF04542 Sigma-70 region 2 ACR55_RS06265 PF08281 Sigma-70, region 4 ACR55_RS06280 PF00892 EamA-like transporter family ACR55_RS06285 PF00582 Universal stress protein family ACR55_RS06310 PF02634 FdhD/NarQ family ACR55_RS06315 PF01568 Molydopterin dinucleotide binding domain ACR55_RS06315 PF12838 4Fe-4S dicluster domain ACR55_RS06315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACR55_RS06315 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACR55_RS06315 PF00384 Molybdopterin oxidoreductase ACR55_RS06320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACR55_RS06320 PF00037 4Fe-4S binding domain ACR55_RS06320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACR55_RS06335 PF04055 Radical SAM superfamily ACR55_RS06335 PF06463 Molybdenum Cofactor Synthesis C ACR55_RS06340 PF12804 MobA-like NTP transferase domain ACR55_RS06345 PF03453 MoeA N-terminal region (domain I and II) ACR55_RS06345 PF00994 Probable molybdopterin binding domain ACR55_RS06345 PF03454 MoeA C-terminal region (domain IV) ACR55_RS06350 PF00994 Probable molybdopterin binding domain ACR55_RS06355 PF02391 MoaE protein ACR55_RS06365 PF01967 MoaC family ACR55_RS06375 PF01738 Dienelactone hydrolase family ACR55_RS06385 PF08534 Redoxin ACR55_RS06400 PF13545 Crp-like helix-turn-helix domain ACR55_RS06400 PF00027 Cyclic nucleotide-binding domain ACR55_RS06405 PF14031 Putative serine dehydratase domain ACR55_RS06405 PF01168 Alanine racemase, N-terminal domain ACR55_RS06410 PF10431 C-terminal, D2-small domain, of ClpB protein ACR55_RS06410 PF02861 Clp amino terminal domain, pathogenicity island component ACR55_RS06410 PF17871 AAA lid domain ACR55_RS06410 PF07724 AAA domain (Cdc48 subfamily) ACR55_RS06410 PF00004 ATPase family associated with various cellular activities (AAA) ACR55_RS06415 PF03466 LysR substrate binding domain ACR55_RS06415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS06420 PF07969 Amidohydrolase family ACR55_RS06430 PF00175 Oxidoreductase NAD-binding domain ACR55_RS06430 PF00258 Flavodoxin ACR55_RS06430 PF00667 FAD binding domain ACR55_RS06435 PF02424 ApbE family ACR55_RS06460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACR55_RS06465 PF01593 Flavin containing amine oxidoreductase ACR55_RS06465 PF01593 Flavin containing amine oxidoreductase ACR55_RS06480 PF00842 Alanine racemase, C-terminal domain ACR55_RS06480 PF01168 Alanine racemase, N-terminal domain ACR55_RS06495 PF18073 Rubredoxin metal binding domain ACR55_RS06510 PF01554 MatE ACR55_RS06520 PF01197 Ribosomal protein L31 ACR55_RS06525 PF03301 Tryptophan 2,3-dioxygenase ACR55_RS06530 PF04199 Putative cyclase ACR55_RS06535 PF04002 RadC-like JAB domain ACR55_RS06545 PF02401 LytB protein ACR55_RS06550 PF14497 Glutathione S-transferase, C-terminal domain ACR55_RS06550 PF02798 Glutathione S-transferase, N-terminal domain ACR55_RS06580 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACR55_RS06580 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACR55_RS06585 PF03466 LysR substrate binding domain ACR55_RS06585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS06595 PF04079 Segregation and condensation complex subunit ScpB ACR55_RS06600 PF01479 S4 domain ACR55_RS06600 PF00849 RNA pseudouridylate synthase ACR55_RS06605 PF17384 RimP C-terminal SH3 domain ACR55_RS06605 PF02576 RimP N-terminal domain ACR55_RS06610 PF13184 NusA-like KH domain ACR55_RS06610 PF08529 NusA N-terminal domain ACR55_RS06615 PF08364 Bacterial translation initiation factor IF-2 associated region ACR55_RS06615 PF00009 Elongation factor Tu GTP binding domain ACR55_RS06615 PF11987 Translation-initiation factor 2 ACR55_RS06615 PF04760 Translation initiation factor IF-2, N-terminal region ACR55_RS06620 PF02033 Ribosome-binding factor A ACR55_RS06625 PF16198 tRNA pseudouridylate synthase B C-terminal domain ACR55_RS06625 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACR55_RS06630 PF00679 Elongation factor G C-terminus ACR55_RS06630 PF00009 Elongation factor Tu GTP binding domain ACR55_RS06630 PF03144 Elongation factor Tu domain 2 ACR55_RS06650 PF07729 FCD domain ACR55_RS06650 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS06660 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS06665 PF00501 AMP-binding enzyme ACR55_RS06665 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS06670 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS06675 PF00080 Copper/zinc superoxide dismutase (SODC) ACR55_RS06680 PF00248 Aldo/keto reductase family ACR55_RS06690 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS06695 PF00005 ABC transporter ACR55_RS06705 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS06710 PF00005 ABC transporter ACR55_RS06710 PF08402 TOBE domain ACR55_RS06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS06715 PF03459 TOBE domain ACR55_RS06730 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS06730 PF00072 Response regulator receiver domain ACR55_RS06735 PF00529 HlyD membrane-fusion protein of T1SS ACR55_RS06735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS06740 PF00873 AcrB/AcrD/AcrF family ACR55_RS06745 PF02321 Outer membrane efflux protein ACR55_RS06750 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ACR55_RS06755 PF01648 4'-phosphopantetheinyl transferase superfamily ACR55_RS06760 PF00933 Glycosyl hydrolase family 3 N terminal domain ACR55_RS06765 PF01541 GIY-YIG catalytic domain ACR55_RS06765 PF02151 UvrB/uvrC motif ACR55_RS06765 PF08459 UvrC Helix-hairpin-helix N-terminal ACR55_RS06770 PF01066 CDP-alcohol phosphatidyltransferase ACR55_RS06780 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ACR55_RS06780 PF14489 QueF-like protein ACR55_RS06785 PF00463 Isocitrate lyase family ACR55_RS06790 PF13649 Methyltransferase domain ACR55_RS06800 PF00155 Aminotransferase class I and II ACR55_RS06805 PF00202 Aminotransferase class-III ACR55_RS06810 PF00403 Heavy-metal-associated domain ACR55_RS06820 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACR55_RS06835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACR55_RS06835 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ACR55_RS06840 PF13746 4Fe-4S dicluster domain ACR55_RS06840 PF12801 4Fe-4S binding domain ACR55_RS06840 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ACR55_RS06855 PF01047 MarR family ACR55_RS06860 PF02566 OsmC-like protein ACR55_RS06865 PF00005 ABC transporter ACR55_RS06870 PF01061 ABC-2 type transporter ACR55_RS06875 PF01594 AI-2E family transporter ACR55_RS06880 PF03707 Bacterial signalling protein N terminal repeat ACR55_RS06880 PF00563 EAL domain ACR55_RS06880 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS06885 PF03447 Homoserine dehydrogenase, NAD binding domain ACR55_RS06885 PF01958 Domain of unknown function DUF108 ACR55_RS06890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS06890 PF03466 LysR substrate binding domain ACR55_RS06895 PF07690 Major Facilitator Superfamily ACR55_RS06935 PF03466 LysR substrate binding domain ACR55_RS06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS06940 PF00296 Luciferase-like monooxygenase ACR55_RS06945 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS06950 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS06950 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS06955 PF00005 ABC transporter ACR55_RS06955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS06960 PF00005 ABC transporter ACR55_RS06960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS06965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS06965 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS06970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS06975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS06975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS06980 PF07690 Major Facilitator Superfamily ACR55_RS06985 PF01965 DJ-1/PfpI family ACR55_RS06990 PF12843 Putative quorum-sensing-regulated virulence factor ACR55_RS06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS06995 PF03466 LysR substrate binding domain ACR55_RS07005 PF00293 NUDIX domain ACR55_RS07020 PF04055 Radical SAM superfamily ACR55_RS07020 PF06968 Biotin and Thiamin Synthesis associated domain ACR55_RS07070 PF04055 Radical SAM superfamily ACR55_RS07070 PF01938 TRAM domain ACR55_RS07070 PF00919 Uncharacterized protein family UPF0004 ACR55_RS07075 PF02562 PhoH-like protein ACR55_RS07080 PF02130 Uncharacterized protein family UPF0054 ACR55_RS07085 PF03471 Transporter associated domain ACR55_RS07085 PF00571 CBS domain ACR55_RS07090 PF00795 Carbon-nitrogen hydrolase ACR55_RS07095 PF00248 Aldo/keto reductase family ACR55_RS07115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS07115 PF01842 ACT domain ACR55_RS07115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS07120 PF03466 LysR substrate binding domain ACR55_RS07125 PF07549 SecD/SecF GG Motif ACR55_RS07125 PF02355 Protein export membrane protein ACR55_RS07130 PF07549 SecD/SecF GG Motif ACR55_RS07130 PF13721 SecD export protein N-terminal TM region ACR55_RS07130 PF02355 Protein export membrane protein ACR55_RS07135 PF02699 Preprotein translocase subunit ACR55_RS07140 PF01702 Queuine tRNA-ribosyltransferase ACR55_RS07145 PF02547 Queuosine biosynthesis protein ACR55_RS07150 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ACR55_RS07160 PF14824 Sirohaem biosynthesis protein central ACR55_RS07160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACR55_RS07160 PF10414 Sirohaem synthase dimerisation region ACR55_RS07170 PF05957 Bacterial protein of unknown function (DUF883) ACR55_RS07185 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ACR55_RS07190 PF01464 Transglycosylase SLT domain ACR55_RS07190 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ACR55_RS07195 PF00155 Aminotransferase class I and II ACR55_RS07205 PF01515 Phosphate acetyl/butaryl transferase ACR55_RS07205 PF00390 Malic enzyme, N-terminal domain ACR55_RS07205 PF03949 Malic enzyme, NAD binding domain ACR55_RS07220 PF04452 RNA methyltransferase ACR55_RS07225 PF00456 Transketolase, thiamine diphosphate binding domain ACR55_RS07225 PF02780 Transketolase, C-terminal domain ACR55_RS07225 PF02779 Transketolase, pyrimidine binding domain ACR55_RS07230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACR55_RS07230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACR55_RS07235 PF00162 Phosphoglycerate kinase ACR55_RS07240 PF00916 Sulfate permease family ACR55_RS07240 PF01740 STAS domain ACR55_RS07250 PF00871 Acetokinase family ACR55_RS07255 PF01515 Phosphate acetyl/butaryl transferase ACR55_RS07260 PF11339 Protein of unknown function (DUF3141) ACR55_RS07270 PF02798 Glutathione S-transferase, N-terminal domain ACR55_RS07270 PF14834 Glutathione S-transferase, C-terminal domain ACR55_RS07285 PF00226 DnaJ domain ACR55_RS07285 PF01556 DnaJ C terminal domain ACR55_RS07315 PF01384 Phosphate transporter family ACR55_RS07320 PF00994 Probable molybdopterin binding domain ACR55_RS07330 PF01476 LysM domain ACR55_RS07330 PF01551 Peptidase family M23 ACR55_RS07330 PF08525 Opacity-associated protein A N-terminal motif ACR55_RS07340 PF01176 Translation initiation factor 1A / IF-1 ACR55_RS07345 PF00005 ABC transporter ACR55_RS07355 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS07370 PF07969 Amidohydrolase family ACR55_RS07375 PF07702 UTRA domain ACR55_RS07375 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS07380 PF06754 Phosphonate metabolism protein PhnG ACR55_RS07390 PF05861 Bacterial phosphonate metabolism protein (PhnI) ACR55_RS07395 PF06007 Phosphonate metabolism protein PhnJ ACR55_RS07400 PF00005 ABC transporter ACR55_RS07405 PF00005 ABC transporter ACR55_RS07410 PF07969 Amidohydrolase family ACR55_RS07430 PF01970 Tripartite tricarboxylate transporter TctA family ACR55_RS07440 PF00583 Acetyltransferase (GNAT) family ACR55_RS07445 PF00375 Sodium:dicarboxylate symporter family ACR55_RS07450 PF01116 Fructose-bisphosphate aldolase class-II ACR55_RS07455 PF01259 SAICAR synthetase ACR55_RS07470 PF00731 AIR carboxylase ACR55_RS07475 PF02222 ATP-grasp domain ACR55_RS07475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ACR55_RS07480 PF01300 Telomere recombination ACR55_RS07480 PF03481 Putative GTP-binding controlling metal-binding ACR55_RS07485 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS07490 PF09339 IclR helix-turn-helix domain ACR55_RS07490 PF01614 Bacterial transcriptional regulator ACR55_RS07495 PF00491 Arginase family ACR55_RS07500 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS07505 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS07510 PF00005 ABC transporter ACR55_RS07515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACR55_RS07515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACR55_RS07525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS07525 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS07525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS07530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACR55_RS07530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACR55_RS07530 PF00205 Thiamine pyrophosphate enzyme, central domain ACR55_RS07535 PF03466 LysR substrate binding domain ACR55_RS07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS07540 PF02899 Phage integrase, N-terminal SAM-like domain ACR55_RS07540 PF00589 Phage integrase family ACR55_RS07545 PF04073 Aminoacyl-tRNA editing domain ACR55_RS07550 PF01965 DJ-1/PfpI family ACR55_RS07560 PF00768 D-alanyl-D-alanine carboxypeptidase ACR55_RS07580 PF12705 PD-(D/E)XK nuclease superfamily ACR55_RS07580 PF00580 UvrD/REP helicase N-terminal domain ACR55_RS07580 PF13361 UvrD-like helicase C-terminal domain ACR55_RS07585 PF12170 DNA polymerase III tau subunit V interacting with alpha ACR55_RS07585 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ACR55_RS07585 PF12169 DNA polymerase III subunits gamma and tau domain III ACR55_RS07590 PF02575 YbaB/EbfC DNA-binding family ACR55_RS07595 PF13662 Toprim domain ACR55_RS07595 PF02132 RecR protein ACR55_RS07600 PF02515 CoA-transferase family III ACR55_RS07610 PF00005 ABC transporter ACR55_RS07615 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS07620 PF00923 Transaldolase/Fructose-6-phosphate aldolase ACR55_RS07625 PF00117 Glutamine amidotransferase class-I ACR55_RS07625 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACR55_RS07630 PF02142 MGS-like domain ACR55_RS07630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACR55_RS07630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACR55_RS07640 PF00106 short chain dehydrogenase ACR55_RS07645 PF00300 Histidine phosphatase superfamily (branch 1) ACR55_RS07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS07650 PF03466 LysR substrate binding domain ACR55_RS07655 PF08402 TOBE domain ACR55_RS07655 PF00005 ABC transporter ACR55_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS07665 PF01547 Bacterial extracellular solute-binding protein ACR55_RS07675 PF00860 Permease family ACR55_RS07680 PF01381 Helix-turn-helix ACR55_RS07685 PF01272 Transcription elongation factor, GreA/GreB, C-term ACR55_RS07685 PF03449 Transcription elongation factor, N-terminal ACR55_RS07695 PF01728 FtsJ-like methyltransferase ACR55_RS07700 PF17862 AAA+ lid domain ACR55_RS07700 PF01434 Peptidase family M41 ACR55_RS07700 PF06480 FtsH Extracellular ACR55_RS07700 PF00004 ATPase family associated with various cellular activities (AAA) ACR55_RS07705 PF00809 Pterin binding enzyme ACR55_RS07710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACR55_RS07710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACR55_RS07710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACR55_RS07710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACR55_RS07720 PF02541 Ppx/GppA phosphatase family ACR55_RS07725 PF13089 Polyphosphate kinase N-terminal domain ACR55_RS07725 PF02503 Polyphosphate kinase middle domain ACR55_RS07725 PF13090 Polyphosphate kinase C-terminal domain 2 ACR55_RS07725 PF17941 Polyphosphate kinase C-terminal domain 1 ACR55_RS07730 PF12849 PBP superfamily domain ACR55_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS07745 PF00005 ABC transporter ACR55_RS07755 PF03773 Predicted permease ACR55_RS07765 PF03466 LysR substrate binding domain ACR55_RS07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS07775 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS07780 PF00171 Aldehyde dehydrogenase family ACR55_RS07790 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS07795 PF00285 Citrate synthase, C-terminal domain ACR55_RS07800 PF03466 LysR substrate binding domain ACR55_RS07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS07805 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS07810 PF02515 CoA-transferase family III ACR55_RS07815 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS07815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS07815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS07820 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS07820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS07820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS07825 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS07830 PF00529 HlyD membrane-fusion protein of T1SS ACR55_RS07830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS07835 PF00873 AcrB/AcrD/AcrF family ACR55_RS07840 PF02321 Outer membrane efflux protein ACR55_RS07850 PF02515 CoA-transferase family III ACR55_RS07855 PF00501 AMP-binding enzyme ACR55_RS07855 PF14535 AMP-binding enzyme C-terminal domain ACR55_RS07860 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS07860 PF08361 MAATS-type transcriptional repressor, C-terminal region ACR55_RS07865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS07865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS07865 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS07875 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS07880 PF00005 ABC transporter ACR55_RS07885 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS07885 PF00005 ABC transporter ACR55_RS07895 PF00106 short chain dehydrogenase ACR55_RS07900 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS07915 PF01575 MaoC like domain ACR55_RS07925 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS07935 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS07945 PF13807 G-rich domain on putative tyrosine kinase ACR55_RS07945 PF13614 AAA domain ACR55_RS07945 PF02706 Chain length determinant protein ACR55_RS07950 PF04932 O-Antigen ligase ACR55_RS07960 PF00535 Glycosyl transferase family 2 ACR55_RS07975 PF01757 Acyltransferase family ACR55_RS08005 PF03808 Glycosyl transferase WecB/TagA/CpsF family ACR55_RS08015 PF02397 Bacterial sugar transferase ACR55_RS08020 PF00483 Nucleotidyl transferase ACR55_RS08020 PF01050 Mannose-6-phosphate isomerase ACR55_RS08035 PF02374 Anion-transporting ATPase ACR55_RS08035 PF17886 HSP20-like domain found in ArsA ACR55_RS08040 PF07238 PilZ domain ACR55_RS08040 PF03552 Cellulose synthase ACR55_RS08040 PF00535 Glycosyl transferase family 2 ACR55_RS08045 PF03170 Bacterial cellulose synthase subunit ACR55_RS08050 PF03170 Bacterial cellulose synthase subunit ACR55_RS08055 PF01270 Glycosyl hydrolases family 8 ACR55_RS08060 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ACR55_RS08060 PF13181 Tetratricopeptide repeat ACR55_RS08075 PF03062 MBOAT, membrane-bound O-acyltransferase family ACR55_RS08080 PF16824 C-terminal carbohydrate-binding module ACR55_RS08080 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX ACR55_RS08090 PF03466 LysR substrate binding domain ACR55_RS08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS08110 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS08115 PF05853 beta-keto acid cleavage enzyme ACR55_RS08125 PF00202 Aminotransferase class-III ACR55_RS08130 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS08145 PF03466 LysR substrate binding domain ACR55_RS08150 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS08150 PF00593 TonB dependent receptor ACR55_RS08155 PF04773 FecR protein ACR55_RS08155 PF16220 Domain of unknown function (DUF4880) ACR55_RS08160 PF04542 Sigma-70 region 2 ACR55_RS08160 PF08281 Sigma-70, region 4 ACR55_RS08165 PF13609 Gram-negative porin ACR55_RS08170 PF00355 Rieske [2Fe-2S] domain ACR55_RS08175 PF03466 LysR substrate binding domain ACR55_RS08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS08180 PF00850 Histone deacetylase domain ACR55_RS08185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACR55_RS08185 PF00355 Rieske [2Fe-2S] domain ACR55_RS08190 PF12697 Alpha/beta hydrolase family ACR55_RS08195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS08200 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS08205 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS08210 PF00005 ABC transporter ACR55_RS08210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS08215 PF14759 Reductase C-terminal ACR55_RS08215 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS08220 PF01613 Flavin reductase like domain ACR55_RS08230 PF03466 LysR substrate binding domain ACR55_RS08230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS08245 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS08250 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS08250 PF07702 UTRA domain ACR55_RS08285 PF01618 MotA/TolQ/ExbB proton channel family ACR55_RS08290 PF02472 Biopolymer transport protein ExbD/TolR ACR55_RS08315 PF09312 SurA N-terminal domain ACR55_RS08315 PF00639 PPIC-type PPIASE domain ACR55_RS08330 PF01914 MarC family integral membrane protein ACR55_RS08335 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS08335 PF07729 FCD domain ACR55_RS08340 PF00694 Aconitase C-terminal domain ACR55_RS08340 PF00330 Aconitase family (aconitate hydratase) ACR55_RS08345 PF12951 Passenger-associated-transport-repeat ACR55_RS08345 PF03797 Autotransporter beta-domain ACR55_RS08360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS08365 PF07969 Amidohydrolase family ACR55_RS08385 PF05724 Thiopurine S-methyltransferase (TPMT) ACR55_RS08415 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS08415 PF00155 Aminotransferase class I and II ACR55_RS08450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACR55_RS08450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACR55_RS08455 PF04381 Putative exonuclease, RdgC ACR55_RS08465 PF00083 Sugar (and other) transporter ACR55_RS08465 PF08946 Osmosensory transporter coiled coil ACR55_RS08470 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS08475 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS08475 PF00072 Response regulator receiver domain ACR55_RS08480 PF00154 recA bacterial DNA recombination protein ACR55_RS08485 PF02631 RecX family ACR55_RS08490 PF03466 LysR substrate binding domain ACR55_RS08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS08495 PF01717 Cobalamin-independent synthase, Catalytic domain ACR55_RS08495 PF08267 Cobalamin-independent synthase, N-terminal domain ACR55_RS08505 PF08442 ATP-grasp domain ACR55_RS08505 PF00549 CoA-ligase ACR55_RS08510 PF00549 CoA-ligase ACR55_RS08510 PF02629 CoA binding domain ACR55_RS08515 PF03741 Integral membrane protein TerC family ACR55_RS08520 PF03741 Integral membrane protein TerC family ACR55_RS08530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACR55_RS08530 PF03900 Porphobilinogen deaminase, C-terminal domain ACR55_RS08550 PF00719 Inorganic pyrophosphatase ACR55_RS08575 PF00106 short chain dehydrogenase ACR55_RS08580 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS08580 PF00005 ABC transporter ACR55_RS08585 PF00005 ABC transporter ACR55_RS08590 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS08600 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS08615 PF00004 ATPase family associated with various cellular activities (AAA) ACR55_RS08615 PF05362 Lon protease (S16) C-terminal proteolytic domain ACR55_RS08615 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACR55_RS08650 PF03958 Bacterial type II/III secretion system short domain ACR55_RS08650 PF00263 Bacterial type II and III secretion system protein ACR55_RS08655 PF00437 Type II/IV secretion system protein ACR55_RS08675 PF01636 Phosphotransferase enzyme family ACR55_RS08680 PF01207 Dihydrouridine synthase (Dus) ACR55_RS08690 PF03631 Virulence factor BrkB ACR55_RS08700 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACR55_RS08705 PF00072 Response regulator receiver domain ACR55_RS08705 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS08710 PF07689 KaiB domain ACR55_RS08710 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS08715 PF00563 EAL domain ACR55_RS08715 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS08715 PF03707 Bacterial signalling protein N terminal repeat ACR55_RS08720 PF01264 Chorismate synthase ACR55_RS08735 PF03472 Autoinducer binding domain ACR55_RS08735 PF00196 Bacterial regulatory proteins, luxR family ACR55_RS08740 PF00330 Aconitase family (aconitate hydratase) ACR55_RS08745 PF00694 Aconitase C-terminal domain ACR55_RS08750 PF00180 Isocitrate/isopropylmalate dehydrogenase ACR55_RS08755 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACR55_RS08755 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACR55_RS08765 PF01416 tRNA pseudouridine synthase ACR55_RS08770 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS08775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ACR55_RS08795 PF08447 PAS fold ACR55_RS08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS08800 PF13609 Gram-negative porin ACR55_RS08820 PF06969 HemN C-terminal domain ACR55_RS08820 PF04055 Radical SAM superfamily ACR55_RS08825 PF00196 Bacterial regulatory proteins, luxR family ACR55_RS08825 PF00072 Response regulator receiver domain ACR55_RS08830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACR55_RS08830 PF03129 Anticodon binding domain ACR55_RS08830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACR55_RS08830 PF02824 TGS domain ACR55_RS08835 PF00707 Translation initiation factor IF-3, C-terminal domain ACR55_RS08835 PF05198 Translation initiation factor IF-3, N-terminal domain ACR55_RS08840 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ACR55_RS08840 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ACR55_RS08850 PF00381 PTS HPr component phosphorylation site ACR55_RS08855 PF05524 PEP-utilising enzyme, N-terminal ACR55_RS08855 PF02896 PEP-utilising enzyme, TIM barrel domain ACR55_RS08855 PF00391 PEP-utilising enzyme, mobile domain ACR55_RS08860 PF01566 Natural resistance-associated macrophage protein ACR55_RS08865 PF02566 OsmC-like protein ACR55_RS08870 PF02423 Ornithine cyclodeaminase/mu-crystallin family ACR55_RS08880 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS08885 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS08895 PF00005 ABC transporter ACR55_RS08900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACR55_RS08905 PF00692 dUTPase ACR55_RS08915 PF09335 SNARE associated Golgi protein ACR55_RS08925 PF03575 Peptidase family S51 ACR55_RS08930 PF01037 Lrp/AsnC ligand binding domain ACR55_RS08940 PF02441 Flavoprotein ACR55_RS08940 PF04127 DNA / pantothenate metabolism flavoprotein ACR55_RS08945 PF01252 Signal peptidase (SPase) II ACR55_RS08950 PF08264 Anticodon-binding domain of tRNA ACR55_RS08950 PF00133 tRNA synthetases class I (I, L, M and V) ACR55_RS08950 PF06827 Zinc finger found in FPG and IleRS ACR55_RS08955 PF06574 FAD synthetase ACR55_RS08955 PF01687 Riboflavin kinase ACR55_RS08960 PF00551 Formyl transferase ACR55_RS08965 PF01189 16S rRNA methyltransferase RsmB/F ACR55_RS08965 PF01029 NusB family ACR55_RS08980 PF13361 UvrD-like helicase C-terminal domain ACR55_RS08980 PF00580 UvrD/REP helicase N-terminal domain ACR55_RS08985 PF12848 ABC transporter ACR55_RS08985 PF00005 ABC transporter ACR55_RS08990 PF05175 Methyltransferase small domain ACR55_RS08995 PF01546 Peptidase family M20/M25/M40 ACR55_RS08995 PF07687 Peptidase dimerisation domain ACR55_RS09000 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ACR55_RS09000 PF14602 Hexapeptide repeat of succinyl-transferase ACR55_RS09000 PF00132 Bacterial transferase hexapeptide (six repeats) ACR55_RS09005 PF00155 Aminotransferase class I and II ACR55_RS09075 PF03837 RecT family ACR55_RS09085 PF12684 PDDEXK-like domain of unknown function (DUF3799) ACR55_RS09085 PF06630 Enterobacterial exodeoxyribonuclease VIII ACR55_RS09165 PF00772 DnaB-like helicase N terminal domain ACR55_RS09165 PF03796 DnaB-like helicase C terminal domain ACR55_RS09305 PF13229 Right handed beta helix region ACR55_RS09305 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ACR55_RS09305 PF12708 Pectate lyase superfamily protein ACR55_RS09330 PF00230 Major intrinsic protein ACR55_RS09335 PF03212 Pertactin ACR55_RS09335 PF03797 Autotransporter beta-domain ACR55_RS09365 PF00313 'Cold-shock' DNA-binding domain ACR55_RS09375 PF00313 'Cold-shock' DNA-binding domain ACR55_RS09380 PF03350 Uncharacterized protein family, UPF0114 ACR55_RS09385 PF05698 Bacterial trigger factor protein (TF) C-terminus ACR55_RS09385 PF05697 Bacterial trigger factor protein (TF) ACR55_RS09385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACR55_RS09390 PF00574 Clp protease ACR55_RS09395 PF10431 C-terminal, D2-small domain, of ClpB protein ACR55_RS09395 PF06689 ClpX C4-type zinc finger ACR55_RS09395 PF07724 AAA domain (Cdc48 subfamily) ACR55_RS09400 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACR55_RS09400 PF05362 Lon protease (S16) C-terminal proteolytic domain ACR55_RS09400 PF00004 ATPase family associated with various cellular activities (AAA) ACR55_RS09405 PF01726 LexA DNA binding domain ACR55_RS09405 PF00717 Peptidase S24-like ACR55_RS09410 PF00155 Aminotransferase class I and II ACR55_RS09415 PF00271 Helicase conserved C-terminal domain ACR55_RS09415 PF04851 Type III restriction enzyme, res subunit ACR55_RS09415 PF02151 UvrB/uvrC motif ACR55_RS09415 PF12344 Ultra-violet resistance protein B ACR55_RS09415 PF17757 UvrB interaction domain ACR55_RS09420 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACR55_RS09425 PF02082 Transcriptional regulator ACR55_RS09430 PF00266 Aminotransferase class-V ACR55_RS09435 PF01592 NifU-like N terminal domain ACR55_RS09440 PF01521 Iron-sulphur cluster biosynthesis ACR55_RS09445 PF07743 HSCB C-terminal oligomerisation domain ACR55_RS09450 PF00012 Hsp70 protein ACR55_RS09455 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS09460 PF04384 Iron-sulphur cluster assembly ACR55_RS09470 PF02142 MGS-like domain ACR55_RS09475 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS09480 PF00005 ABC transporter ACR55_RS09480 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS09490 PF11862 Domain of unknown function (DUF3382) ACR55_RS09490 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS09500 PF00005 ABC transporter ACR55_RS09505 PF00501 AMP-binding enzyme ACR55_RS09510 PF17932 Tetracyclin repressor-like, C-terminal domain ACR55_RS09510 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS09520 PF01336 OB-fold nucleic acid binding domain ACR55_RS09520 PF00152 tRNA synthetases class II (D, K and N) ACR55_RS09525 PF00106 short chain dehydrogenase ACR55_RS09530 PF00472 RF-1 domain ACR55_RS09530 PF03462 PCRF domain ACR55_RS09535 PF17768 RecJ OB domain ACR55_RS09535 PF02272 DHHA1 domain ACR55_RS09535 PF01368 DHH family ACR55_RS09545 PF12704 MacB-like periplasmic core domain ACR55_RS09545 PF02687 FtsX-like permease family ACR55_RS09550 PF00005 ABC transporter ACR55_RS09555 PF01026 TatD related DNase ACR55_RS09570 PF03772 Competence protein ACR55_RS09570 PF00753 Metallo-beta-lactamase superfamily ACR55_RS09575 PF00892 EamA-like transporter family ACR55_RS09585 PF02811 PHP domain ACR55_RS09590 PF03449 Transcription elongation factor, N-terminal ACR55_RS09590 PF01272 Transcription elongation factor, GreA/GreB, C-term ACR55_RS09595 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS09600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ACR55_RS09600 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ACR55_RS09605 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ACR55_RS09610 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ACR55_RS09610 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACR55_RS09610 PF02769 AIR synthase related protein, C-terminal domain ACR55_RS09650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS09655 PF00005 ABC transporter ACR55_RS09655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS09660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS09660 PF00005 ABC transporter ACR55_RS09665 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS09665 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS09670 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS09675 PF13454 FAD-NAD(P)-binding ACR55_RS09680 PF03466 LysR substrate binding domain ACR55_RS09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS09685 PF08021 Siderophore-interacting FAD-binding domain ACR55_RS09685 PF04954 Siderophore-interacting protein ACR55_RS09690 PF03551 Transcriptional regulator PadR-like family ACR55_RS09700 PF00478 IMP dehydrogenase / GMP reductase domain ACR55_RS09700 PF00571 CBS domain ACR55_RS09705 PF02540 NAD synthase ACR55_RS09705 PF00958 GMP synthase C terminal domain ACR55_RS09705 PF00117 Glutamine amidotransferase class-I ACR55_RS09725 PF05284 Protein of unknown function (DUF736) ACR55_RS09740 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS09745 PF02567 Phenazine biosynthesis-like protein ACR55_RS09750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACR55_RS09750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACR55_RS09755 PF12833 Helix-turn-helix domain ACR55_RS09755 PF00730 HhH-GPD superfamily base excision DNA repair protein ACR55_RS09755 PF06029 AlkA N-terminal domain ACR55_RS09755 PF02805 Metal binding domain of Ada ACR55_RS09760 PF03466 LysR substrate binding domain ACR55_RS09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS09785 PF00005 ABC transporter ACR55_RS09785 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS09790 PF00005 ABC transporter ACR55_RS09795 PF00171 Aldehyde dehydrogenase family ACR55_RS09800 PF00465 Iron-containing alcohol dehydrogenase ACR55_RS09805 PF00455 DeoR C terminal sensor domain ACR55_RS09805 PF08220 DeoR-like helix-turn-helix domain ACR55_RS09810 PF04185 Phosphoesterase family ACR55_RS09810 PF05506 Domain of unknown function (DUF756) ACR55_RS09820 PF03466 LysR substrate binding domain ACR55_RS09820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS09825 PF07690 Major Facilitator Superfamily ACR55_RS09830 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS09830 PF00593 TonB dependent receptor ACR55_RS09835 PF04773 FecR protein ACR55_RS09835 PF16220 Domain of unknown function (DUF4880) ACR55_RS09840 PF08281 Sigma-70, region 4 ACR55_RS09840 PF04542 Sigma-70 region 2 ACR55_RS09845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACR55_RS09845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACR55_RS09850 PF00196 Bacterial regulatory proteins, luxR family ACR55_RS09850 PF00072 Response regulator receiver domain ACR55_RS09855 PF13492 GAF domain ACR55_RS09855 PF07730 Histidine kinase ACR55_RS09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS09890 PF01043 SecA preprotein cross-linking domain ACR55_RS09890 PF07517 SecA DEAD-like domain ACR55_RS09905 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS09910 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS09915 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS09920 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS09925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS09925 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS09925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS09935 PF13380 CoA binding domain ACR55_RS09935 PF00583 Acetyltransferase (GNAT) family ACR55_RS09935 PF13607 Succinyl-CoA ligase like flavodoxin domain ACR55_RS09940 PF12833 Helix-turn-helix domain ACR55_RS09940 PF02311 AraC-like ligand binding domain ACR55_RS09945 PF07690 Major Facilitator Superfamily ACR55_RS09955 PF00155 Aminotransferase class I and II ACR55_RS09955 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS09960 PF02627 Carboxymuconolactone decarboxylase family ACR55_RS09965 PF00248 Aldo/keto reductase family ACR55_RS09970 PF07690 Major Facilitator Superfamily ACR55_RS09975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS09975 PF03466 LysR substrate binding domain ACR55_RS09980 PF00108 Thiolase, N-terminal domain ACR55_RS09980 PF02803 Thiolase, C-terminal domain ACR55_RS10000 PF01381 Helix-turn-helix ACR55_RS10000 PF07883 Cupin domain ACR55_RS10015 PF07690 Major Facilitator Superfamily ACR55_RS10020 PF01638 HxlR-like helix-turn-helix ACR55_RS10025 PF13404 AsnC-type helix-turn-helix domain ACR55_RS10025 PF01037 Lrp/AsnC ligand binding domain ACR55_RS10035 PF03972 MmgE/PrpD family ACR55_RS10040 PF03466 LysR substrate binding domain ACR55_RS10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS10045 PF02535 ZIP Zinc transporter ACR55_RS10065 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS10075 PF12833 Helix-turn-helix domain ACR55_RS10075 PF01965 DJ-1/PfpI family ACR55_RS10085 PF07690 Major Facilitator Superfamily ACR55_RS10090 PF06983 3-demethylubiquinone-9 3-methyltransferase ACR55_RS10110 PF00793 DAHP synthetase I family ACR55_RS10115 PF01810 LysE type translocator ACR55_RS10120 PF01810 LysE type translocator ACR55_RS10130 PF01661 Macro domain ACR55_RS10135 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS10135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACR55_RS10145 PF00155 Aminotransferase class I and II ACR55_RS10145 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS10165 PF01546 Peptidase family M20/M25/M40 ACR55_RS10165 PF07687 Peptidase dimerisation domain ACR55_RS10170 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ACR55_RS10170 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ACR55_RS10175 PF00005 ABC transporter ACR55_RS10180 PF03649 Uncharacterised protein family (UPF0014) ACR55_RS10190 PF14579 Helix-hairpin-helix motif ACR55_RS10190 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACR55_RS10190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACR55_RS10190 PF02811 PHP domain ACR55_RS10205 PF00672 HAMP domain ACR55_RS10205 PF16591 Helical bimodular sensor domain ACR55_RS10205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS10210 PF02230 Phospholipase/Carboxylesterase ACR55_RS10215 PF02321 Outer membrane efflux protein ACR55_RS10220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS10220 PF00529 HlyD membrane-fusion protein of T1SS ACR55_RS10230 PF04632 Fusaric acid resistance protein family ACR55_RS10240 PF01242 6-pyruvoyl tetrahydropterin synthase ACR55_RS10250 PF09339 IclR helix-turn-helix domain ACR55_RS10250 PF01614 Bacterial transcriptional regulator ACR55_RS10255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACR55_RS10255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACR55_RS10260 PF00171 Aldehyde dehydrogenase family ACR55_RS10265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS10265 PF01842 ACT domain ACR55_RS10265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS10270 PF00596 Class II Aldolase and Adducin N-terminal domain ACR55_RS10275 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS10280 PF00472 RF-1 domain ACR55_RS10305 PF04073 Aminoacyl-tRNA editing domain ACR55_RS10320 PF00005 ABC transporter ACR55_RS10325 PF13533 Biotin-lipoyl like ACR55_RS10345 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ACR55_RS10345 PF01266 FAD dependent oxidoreductase ACR55_RS10350 PF00455 DeoR C terminal sensor domain ACR55_RS10350 PF08220 DeoR-like helix-turn-helix domain ACR55_RS10360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACR55_RS10375 PF01037 Lrp/AsnC ligand binding domain ACR55_RS10380 PF01266 FAD dependent oxidoreductase ACR55_RS10385 PF00149 Calcineurin-like phosphoesterase ACR55_RS10385 PF12320 Type 5 capsule protein repressor C-terminal domain ACR55_RS10395 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS10400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACR55_RS10400 PF00361 Proton-conducting membrane transporter ACR55_RS10400 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ACR55_RS10400 PF13244 Domain of unknown function (DUF4040) ACR55_RS10405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACR55_RS10410 PF00361 Proton-conducting membrane transporter ACR55_RS10420 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ACR55_RS10425 PF03334 Na+/H+ antiporter subunit ACR55_RS10440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACR55_RS10445 PF02016 LD-carboxypeptidase N-terminal domain ACR55_RS10445 PF17676 LD-carboxypeptidase C-terminal domain ACR55_RS10450 PF12848 ABC transporter ACR55_RS10450 PF00005 ABC transporter ACR55_RS10455 PF03358 NADPH-dependent FMN reductase ACR55_RS10460 PF03466 LysR substrate binding domain ACR55_RS10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS10465 PF00005 ABC transporter ACR55_RS10485 PF01205 Uncharacterized protein family UPF0029 ACR55_RS10490 PF00085 Thioredoxin ACR55_RS10495 PF00296 Luciferase-like monooxygenase ACR55_RS10500 PF00860 Permease family ACR55_RS10505 PF00814 Glycoprotease family ACR55_RS10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS10510 PF03466 LysR substrate binding domain ACR55_RS10515 PF04909 Amidohydrolase ACR55_RS10520 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS10535 PF02660 Glycerol-3-phosphate acyltransferase ACR55_RS10540 PF01975 Survival protein SurE ACR55_RS10550 PF01476 LysM domain ACR55_RS10550 PF01551 Peptidase family M23 ACR55_RS10570 PF05958 tRNA (Uracil-5-)-methyltransferase ACR55_RS10575 PF00376 MerR family regulatory protein ACR55_RS10575 PF09278 MerR, DNA binding ACR55_RS10580 PF00403 Heavy-metal-associated domain ACR55_RS10585 PF00403 Heavy-metal-associated domain ACR55_RS10590 PF08534 Redoxin ACR55_RS10590 PF00462 Glutaredoxin ACR55_RS10595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACR55_RS10595 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS10600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ACR55_RS10605 PF03009 Glycerophosphoryl diester phosphodiesterase family ACR55_RS10610 PF13145 PPIC-type PPIASE domain ACR55_RS10615 PF13472 GDSL-like Lipase/Acylhydrolase family ACR55_RS10620 PF00005 ABC transporter ACR55_RS10630 PF05860 haemagglutination activity domain ACR55_RS10630 PF05594 Haemagluttinin repeat ACR55_RS10630 PF13018 Extended Signal Peptide of Type V secretion system ACR55_RS10630 PF05860 haemagglutination activity domain ACR55_RS10630 PF13332 Hemagglutinin repeat ACR55_RS10630 PF13332 Hemagglutinin repeat ACR55_RS10630 PF05594 Haemagluttinin repeat ACR55_RS10630 PF13018 Extended Signal Peptide of Type V secretion system ACR55_RS10640 PF02753 Pili assembly chaperone PapD, C-terminal domain ACR55_RS10640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ACR55_RS10645 PF13954 PapC N-terminal domain ACR55_RS10645 PF00577 Outer membrane usher protein ACR55_RS10645 PF13953 PapC C-terminal domain ACR55_RS10655 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ACR55_RS10655 PF17287 POTRA domain ACR55_RS10655 PF08479 POTRA domain, ShlB-type ACR55_RS10660 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ACR55_RS10670 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS10685 PF01968 Hydantoinase/oxoprolinase ACR55_RS10685 PF05378 Hydantoinase/oxoprolinase N-terminal region ACR55_RS10695 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS10700 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS10705 PF00005 ABC transporter ACR55_RS10710 PF04607 Region found in RelA / SpoT proteins ACR55_RS10710 PF02824 TGS domain ACR55_RS10710 PF13291 ACT domain ACR55_RS10715 PF01192 RNA polymerase Rpb6 ACR55_RS10720 PF00625 Guanylate kinase ACR55_RS10730 PF00877 NlpC/P60 family ACR55_RS10735 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ACR55_RS10735 PF01048 Phosphorylase superfamily ACR55_RS10750 PF03755 YicC-like family, N-terminal region ACR55_RS10750 PF08340 Domain of unknown function (DUF1732) ACR55_RS10755 PF01138 3' exoribonuclease family, domain 1 ACR55_RS10755 PF03725 3' exoribonuclease family, domain 2 ACR55_RS10765 PF03972 MmgE/PrpD family ACR55_RS10770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS10770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS10770 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS10775 PF03466 LysR substrate binding domain ACR55_RS10775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS10780 PF02203 Tar ligand binding domain homologue ACR55_RS10780 PF00672 HAMP domain ACR55_RS10780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS10785 PF00563 EAL domain ACR55_RS10785 PF03707 Bacterial signalling protein N terminal repeat ACR55_RS10785 PF13188 PAS domain ACR55_RS10785 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS10790 PF01725 Ham1 family ACR55_RS10795 PF06969 HemN C-terminal domain ACR55_RS10795 PF04055 Radical SAM superfamily ACR55_RS10800 PF00120 Glutamine synthetase, catalytic domain ACR55_RS10800 PF03951 Glutamine synthetase, beta-Grasp domain ACR55_RS10805 PF00989 PAS fold ACR55_RS10805 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS10805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS10810 PF00072 Response regulator receiver domain ACR55_RS10810 PF02954 Bacterial regulatory protein, Fis family ACR55_RS10810 PF00158 Sigma-54 interaction domain ACR55_RS10815 PF00072 Response regulator receiver domain ACR55_RS10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS10835 PF03466 LysR substrate binding domain ACR55_RS10840 PF17954 Quercetinase C-terminal cupin domain ACR55_RS10840 PF02678 Pirin ACR55_RS10845 PF05726 Pirin C-terminal cupin domain ACR55_RS10845 PF02678 Pirin ACR55_RS10850 PF00005 ABC transporter ACR55_RS10850 PF08402 TOBE domain ACR55_RS10860 PF13416 Bacterial extracellular solute-binding protein ACR55_RS10865 PF00970 Oxidoreductase FAD-binding domain ACR55_RS10865 PF00175 Oxidoreductase NAD-binding domain ACR55_RS10875 PF01042 Endoribonuclease L-PSP ACR55_RS10880 PF17191 RecG wedge domain ACR55_RS10880 PF00271 Helicase conserved C-terminal domain ACR55_RS10880 PF00270 DEAD/DEAH box helicase ACR55_RS10885 PF03466 LysR substrate binding domain ACR55_RS10885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS10890 PF03466 LysR substrate binding domain ACR55_RS10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS10895 PF00171 Aldehyde dehydrogenase family ACR55_RS10915 PF01042 Endoribonuclease L-PSP ACR55_RS10925 PF00005 ABC transporter ACR55_RS10930 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS10940 PF00171 Aldehyde dehydrogenase family ACR55_RS10945 PF00732 GMC oxidoreductase ACR55_RS10945 PF05199 GMC oxidoreductase ACR55_RS10955 PF00210 Ferritin-like domain ACR55_RS10980 PF01061 ABC-2 type transporter ACR55_RS10985 PF00005 ABC transporter ACR55_RS10995 PF00534 Glycosyl transferases group 1 ACR55_RS11005 PF02563 Polysaccharide biosynthesis/export protein ACR55_RS11010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACR55_RS11010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACR55_RS11010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACR55_RS11020 PF13458 Periplasmic binding protein ACR55_RS11025 PF17912 MalK OB fold domain ACR55_RS11025 PF00005 ABC transporter ACR55_RS11030 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS11035 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS11040 PF13416 Bacterial extracellular solute-binding protein ACR55_RS11045 PF03807 NADP oxidoreductase coenzyme F420-dependent ACR55_RS11045 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACR55_RS11050 PF02592 Putative vitamin uptake transporter ACR55_RS11055 PF13458 Periplasmic binding protein ACR55_RS11060 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS11065 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS11065 PF11862 Domain of unknown function (DUF3382) ACR55_RS11070 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS11070 PF00005 ABC transporter ACR55_RS11075 PF00005 ABC transporter ACR55_RS11080 PF01177 Asp/Glu/Hydantoin racemase ACR55_RS11090 PF00043 Glutathione S-transferase, C-terminal domain ACR55_RS11090 PF02798 Glutathione S-transferase, N-terminal domain ACR55_RS11095 PF07995 Glucose / Sorbosone dehydrogenase ACR55_RS11105 PF00892 EamA-like transporter family ACR55_RS11110 PF04241 Protein of unknown function (DUF423) ACR55_RS11115 PF01479 S4 domain ACR55_RS11125 PF08808 RES domain ACR55_RS11130 PF03180 NLPA lipoprotein ACR55_RS11135 PF01070 FMN-dependent dehydrogenase ACR55_RS11140 PF02666 Phosphatidylserine decarboxylase ACR55_RS11150 PF00171 Aldehyde dehydrogenase family ACR55_RS11155 PF07687 Peptidase dimerisation domain ACR55_RS11155 PF01546 Peptidase family M20/M25/M40 ACR55_RS11160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACR55_RS11160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACR55_RS11160 PF00205 Thiamine pyrophosphate enzyme, central domain ACR55_RS11170 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ACR55_RS11170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ACR55_RS11180 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS11180 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ACR55_RS11185 PF07729 FCD domain ACR55_RS11185 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS11190 PF04343 Protein of unknown function, DUF488 ACR55_RS11195 PF02080 TrkA-C domain ACR55_RS11195 PF06826 Predicted Permease Membrane Region ACR55_RS11200 PF00282 Pyridoxal-dependent decarboxylase conserved domain ACR55_RS11205 PF05977 Transmembrane secretion effector ACR55_RS11210 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS11210 PF00072 Response regulator receiver domain ACR55_RS11210 PF00989 PAS fold ACR55_RS11210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS11210 PF01627 Hpt domain ACR55_RS11210 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS11215 PF00072 Response regulator receiver domain ACR55_RS11215 PF00196 Bacterial regulatory proteins, luxR family ACR55_RS11220 PF01590 GAF domain ACR55_RS11220 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS11220 PF00360 Phytochrome region ACR55_RS11220 PF00563 EAL domain ACR55_RS11225 PF01546 Peptidase family M20/M25/M40 ACR55_RS11225 PF07687 Peptidase dimerisation domain ACR55_RS11230 PF03471 Transporter associated domain ACR55_RS11230 PF03741 Integral membrane protein TerC family ACR55_RS11235 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS11235 PF00593 TonB dependent receptor ACR55_RS11245 PF04542 Sigma-70 region 2 ACR55_RS11245 PF08281 Sigma-70, region 4 ACR55_RS11255 PF00563 EAL domain ACR55_RS11255 PF12792 CSS motif domain associated with EAL ACR55_RS11260 PF13458 Periplasmic binding protein ACR55_RS11270 PF00005 ABC transporter ACR55_RS11270 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS11275 PF00005 ABC transporter ACR55_RS11280 PF00892 EamA-like transporter family ACR55_RS11300 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS11305 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS11310 PF00005 ABC transporter ACR55_RS11315 PF01970 Tripartite tricarboxylate transporter TctA family ACR55_RS11320 PF07331 Tripartite tricarboxylate transporter TctB family ACR55_RS11325 PF03971 Monomeric isocitrate dehydrogenase ACR55_RS11340 PF02016 LD-carboxypeptidase N-terminal domain ACR55_RS11340 PF17676 LD-carboxypeptidase C-terminal domain ACR55_RS11350 PF01588 Putative tRNA binding domain ACR55_RS11360 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS11360 PF00593 TonB dependent receptor ACR55_RS11365 PF00756 Putative esterase ACR55_RS11370 PF00005 ABC transporter ACR55_RS11375 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS11375 PF00005 ABC transporter ACR55_RS11385 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS11390 PF13458 Periplasmic binding protein ACR55_RS11395 PF00296 Luciferase-like monooxygenase ACR55_RS11405 PF03358 NADPH-dependent FMN reductase ACR55_RS11415 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS11425 PF12146 Serine aminopeptidase, S33 ACR55_RS11435 PF00501 AMP-binding enzyme ACR55_RS11435 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS11440 PF00005 ABC transporter ACR55_RS11445 PF00005 ABC transporter ACR55_RS11445 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS11450 PF11862 Domain of unknown function (DUF3382) ACR55_RS11450 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS11455 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS11465 PF00701 Dihydrodipicolinate synthetase family ACR55_RS11475 PF07690 Major Facilitator Superfamily ACR55_RS11480 PF01425 Amidase ACR55_RS11485 PF00356 Bacterial regulatory proteins, lacI family ACR55_RS11495 PF02515 CoA-transferase family III ACR55_RS11500 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS11500 PF00501 AMP-binding enzyme ACR55_RS11505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS11505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS11505 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS11510 PF02803 Thiolase, C-terminal domain ACR55_RS11510 PF00108 Thiolase, N-terminal domain ACR55_RS11515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACR55_RS11515 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS11515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACR55_RS11525 PF01494 FAD binding domain ACR55_RS11530 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS11535 PF02515 CoA-transferase family III ACR55_RS11540 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS11545 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS11550 PF03466 LysR substrate binding domain ACR55_RS11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS11560 PF00465 Iron-containing alcohol dehydrogenase ACR55_RS11565 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ACR55_RS11570 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS11575 PF01070 FMN-dependent dehydrogenase ACR55_RS11585 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS11590 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS11590 PF00107 Zinc-binding dehydrogenase ACR55_RS11595 PF00005 ABC transporter ACR55_RS11595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS11600 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS11605 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS11610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS11615 PF01979 Amidohydrolase family ACR55_RS11620 PF01979 Amidohydrolase family ACR55_RS11620 PF00449 Urease alpha-subunit, N-terminal domain ACR55_RS11630 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS11630 PF07729 FCD domain ACR55_RS11640 PF12697 Alpha/beta hydrolase family ACR55_RS11645 PF01979 Amidohydrolase family ACR55_RS11655 PF00005 ABC transporter ACR55_RS11660 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS11670 PF13183 4Fe-4S dicluster domain ACR55_RS11670 PF13085 2Fe-2S iron-sulfur cluster binding domain ACR55_RS11675 PF02910 Fumarate reductase flavoprotein C-term ACR55_RS11675 PF00890 FAD binding domain ACR55_RS11680 PF00005 ABC transporter ACR55_RS11685 PF00005 ABC transporter ACR55_RS11690 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS11705 PF07687 Peptidase dimerisation domain ACR55_RS11705 PF01546 Peptidase family M20/M25/M40 ACR55_RS11710 PF07690 Major Facilitator Superfamily ACR55_RS11710 PF00083 Sugar (and other) transporter ACR55_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS11715 PF03466 LysR substrate binding domain ACR55_RS11720 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACR55_RS11720 PF04963 Sigma-54 factor, core binding domain ACR55_RS11720 PF04552 Sigma-54, DNA binding domain ACR55_RS11725 PF00072 Response regulator receiver domain ACR55_RS11725 PF02954 Bacterial regulatory protein, Fis family ACR55_RS11725 PF00158 Sigma-54 interaction domain ACR55_RS11730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACR55_RS11730 PF00205 Thiamine pyrophosphate enzyme, central domain ACR55_RS11730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACR55_RS11750 PF00664 ABC transporter transmembrane region ACR55_RS11750 PF00005 ABC transporter ACR55_RS11765 PF00534 Glycosyl transferases group 1 ACR55_RS11765 PF13439 Glycosyltransferase Family 4 ACR55_RS11785 PF16861 Carbamoyltransferase C-terminus ACR55_RS11785 PF02543 Carbamoyltransferase N-terminus ACR55_RS11795 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACR55_RS11805 PF16363 GDP-mannose 4,6 dehydratase ACR55_RS11820 PF00535 Glycosyl transferase family 2 ACR55_RS11835 PF00483 Nucleotidyl transferase ACR55_RS11840 PF05974 Domain of unknown function (DUF892) ACR55_RS11845 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS11845 PF00072 Response regulator receiver domain ACR55_RS11845 PF13188 PAS domain ACR55_RS11845 PF08448 PAS fold ACR55_RS11850 PF02954 Bacterial regulatory protein, Fis family ACR55_RS11850 PF00158 Sigma-54 interaction domain ACR55_RS11850 PF00072 Response regulator receiver domain ACR55_RS11865 PF00128 Alpha amylase, catalytic domain ACR55_RS11870 PF02446 4-alpha-glucanotransferase ACR55_RS11875 PF00128 Alpha amylase, catalytic domain ACR55_RS11875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACR55_RS11875 PF11941 Domain of unknown function (DUF3459) ACR55_RS11880 PF00128 Alpha amylase, catalytic domain ACR55_RS11880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACR55_RS11885 PF00128 Alpha amylase, catalytic domain ACR55_RS11885 PF02806 Alpha amylase, C-terminal all-beta domain ACR55_RS11885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACR55_RS11890 PF00128 Alpha amylase, catalytic domain ACR55_RS11890 PF16657 Maltogenic Amylase, C-terminal domain ACR55_RS11895 PF11896 Domain of unknown function (DUF3416) ACR55_RS11895 PF00128 Alpha amylase, catalytic domain ACR55_RS11900 PF00534 Glycosyl transferases group 1 ACR55_RS11900 PF08323 Starch synthase catalytic domain ACR55_RS11905 PF00924 Mechanosensitive ion channel ACR55_RS11915 PF00994 Probable molybdopterin binding domain ACR55_RS11915 PF18146 Damage-inducible protein CinA KH domain ACR55_RS11915 PF02464 Competence-damaged protein ACR55_RS11930 PF00342 Phosphoglucose isomerase ACR55_RS11935 PF13091 PLD-like domain ACR55_RS11940 PF03372 Endonuclease/Exonuclease/phosphatase family ACR55_RS11945 PF00034 Cytochrome c ACR55_RS11950 PF00732 GMC oxidoreductase ACR55_RS11950 PF05199 GMC oxidoreductase ACR55_RS11970 PF00106 short chain dehydrogenase ACR55_RS11975 PF05067 Manganese containing catalase ACR55_RS11985 PF09828 Chromate resistance exported protein ACR55_RS11990 PF02583 Metal-sensitive transcriptional repressor ACR55_RS11995 PF03824 High-affinity nickel-transport protein ACR55_RS12005 PF00158 Sigma-54 interaction domain ACR55_RS12005 PF06506 Propionate catabolism activator ACR55_RS12005 PF02954 Bacterial regulatory protein, Fis family ACR55_RS12015 PF00330 Aconitase family (aconitate hydratase) ACR55_RS12015 PF00694 Aconitase C-terminal domain ACR55_RS12020 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS12025 PF00491 Arginase family ACR55_RS12035 PF09347 Domain of unknown function (DUF1989) ACR55_RS12040 PF07687 Peptidase dimerisation domain ACR55_RS12040 PF01546 Peptidase family M20/M25/M40 ACR55_RS12045 PF00005 ABC transporter ACR55_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS12055 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS12060 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS12070 PF13416 Bacterial extracellular solute-binding protein ACR55_RS12075 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS12090 PF03737 Aldolase/RraA ACR55_RS12095 PF03459 TOBE domain ACR55_RS12095 PF17912 MalK OB fold domain ACR55_RS12095 PF00005 ABC transporter ACR55_RS12100 PF08546 Ketopantoate reductase PanE/ApbA C terminal ACR55_RS12100 PF02558 Ketopantoate reductase PanE/ApbA ACR55_RS12105 PF13378 Enolase C-terminal domain-like ACR55_RS12110 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS12115 PF00330 Aconitase family (aconitate hydratase) ACR55_RS12120 PF00694 Aconitase C-terminal domain ACR55_RS12125 PF00356 Bacterial regulatory proteins, lacI family ACR55_RS12130 PF13417 Glutathione S-transferase, N-terminal domain ACR55_RS12155 PF03466 LysR substrate binding domain ACR55_RS12155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS12160 PF07883 Cupin domain ACR55_RS12165 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS12170 PF13417 Glutathione S-transferase, N-terminal domain ACR55_RS12175 PF01494 FAD binding domain ACR55_RS12180 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS12190 PF00857 Isochorismatase family ACR55_RS12200 PF00563 EAL domain ACR55_RS12200 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS12200 PF03707 Bacterial signalling protein N terminal repeat ACR55_RS12205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS12205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS12240 PF05698 Bacterial trigger factor protein (TF) C-terminus ACR55_RS12245 PF00583 Acetyltransferase (GNAT) family ACR55_RS12260 PF04102 SlyX ACR55_RS12265 PF00795 Carbon-nitrogen hydrolase ACR55_RS12270 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS12280 PF00005 ABC transporter ACR55_RS12285 PF00005 ABC transporter ACR55_RS12285 PF08402 TOBE domain ACR55_RS12290 PF00171 Aldehyde dehydrogenase family ACR55_RS12300 PF13458 Periplasmic binding protein ACR55_RS12325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS12325 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS12325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS12330 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS12330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS12330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS12335 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS12340 PF13380 CoA binding domain ACR55_RS12340 PF13607 Succinyl-CoA ligase like flavodoxin domain ACR55_RS12345 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS12360 PF00202 Aminotransferase class-III ACR55_RS12375 PF00958 GMP synthase C terminal domain ACR55_RS12375 PF00117 Glutamine amidotransferase class-I ACR55_RS12395 PF00501 AMP-binding enzyme ACR55_RS12395 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS12405 PF02515 CoA-transferase family III ACR55_RS12410 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS12415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS12415 PF03466 LysR substrate binding domain ACR55_RS12420 PF07690 Major Facilitator Superfamily ACR55_RS12425 PF00205 Thiamine pyrophosphate enzyme, central domain ACR55_RS12425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACR55_RS12425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACR55_RS12430 PF03466 LysR substrate binding domain ACR55_RS12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS12435 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS12450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS12450 PF00005 ABC transporter ACR55_RS12455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS12455 PF00005 ABC transporter ACR55_RS12460 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS12460 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS12465 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS12470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS12475 PF01804 Penicillin amidase ACR55_RS12480 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS12480 PF07729 FCD domain ACR55_RS12485 PF00202 Aminotransferase class-III ACR55_RS12490 PF00456 Transketolase, thiamine diphosphate binding domain ACR55_RS12495 PF02779 Transketolase, pyrimidine binding domain ACR55_RS12495 PF02780 Transketolase, C-terminal domain ACR55_RS12500 PF03466 LysR substrate binding domain ACR55_RS12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS12505 PF00596 Class II Aldolase and Adducin N-terminal domain ACR55_RS12515 PF01842 ACT domain ACR55_RS12515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS12515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS12520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACR55_RS12520 PF00034 Cytochrome c ACR55_RS12525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACR55_RS12530 PF03891 Domain of unknown function (DUF333) ACR55_RS12540 PF04286 Protein of unknown function (DUF445) ACR55_RS12555 PF18081 Fanconi anemia-associated nuclease SAP domain ACR55_RS12555 PF08774 VRR-NUC domain ACR55_RS12565 PF02735 Ku70/Ku80 beta-barrel domain ACR55_RS12570 PF13298 DNA polymerase Ligase (LigD) ACR55_RS12570 PF01068 ATP dependent DNA ligase domain ACR55_RS12570 PF04679 ATP dependent DNA ligase C terminal region ACR55_RS12575 PF04945 YHS domain ACR55_RS12580 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS12585 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ACR55_RS12585 PF00561 alpha/beta hydrolase fold ACR55_RS12590 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ACR55_RS12590 PF02321 Outer membrane efflux protein ACR55_RS12595 PF13533 Biotin-lipoyl like ACR55_RS12600 PF00005 ABC transporter ACR55_RS12615 PF00106 short chain dehydrogenase ACR55_RS12620 PF00582 Universal stress protein family ACR55_RS12635 PF07681 DoxX ACR55_RS12640 PF02627 Carboxymuconolactone decarboxylase family ACR55_RS12645 PF02525 Flavodoxin-like fold ACR55_RS12655 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS12655 PF00155 Aminotransferase class I and II ACR55_RS12670 PF00578 AhpC/TSA family ACR55_RS12680 PF03960 ArsC family ACR55_RS12685 PF02515 CoA-transferase family III ACR55_RS12690 PF00875 DNA photolyase ACR55_RS12690 PF03441 FAD binding domain of DNA photolyase ACR55_RS12710 PF00255 Glutathione peroxidase ACR55_RS12715 PF13404 AsnC-type helix-turn-helix domain ACR55_RS12715 PF01037 Lrp/AsnC ligand binding domain ACR55_RS12735 PF03099 Biotin/lipoate A/B protein ligase family ACR55_RS12735 PF10437 Bacterial lipoate protein ligase C-terminus ACR55_RS12745 PF00574 Clp protease ACR55_RS12755 PF01022 Bacterial regulatory protein, arsR family ACR55_RS12760 PF02417 Chromate transporter ACR55_RS12765 PF02417 Chromate transporter ACR55_RS12770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACR55_RS12770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACR55_RS12775 PF00106 short chain dehydrogenase ACR55_RS12790 PF03466 LysR substrate binding domain ACR55_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS12795 PF00491 Arginase family ACR55_RS12800 PF00005 ABC transporter ACR55_RS12805 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS12810 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS12825 PF01026 TatD related DNase ACR55_RS12830 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ACR55_RS12830 PF12170 DNA polymerase III tau subunit V interacting with alpha ACR55_RS12830 PF12169 DNA polymerase III subunits gamma and tau domain III ACR55_RS12835 PF02223 Thymidylate kinase ACR55_RS12840 PF02618 YceG-like family ACR55_RS12845 PF01571 Aminomethyltransferase folate-binding domain ACR55_RS12855 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACR55_RS12855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACR55_RS12860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACR55_RS12860 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS12860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACR55_RS12865 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS12865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS12865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS12870 PF03658 RnfH family Ubiquitin ACR55_RS12880 PF01668 SmpB protein ACR55_RS12885 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS12890 PF01145 SPFH domain / Band 7 family ACR55_RS12900 PF00391 PEP-utilising enzyme, mobile domain ACR55_RS12900 PF02896 PEP-utilising enzyme, TIM barrel domain ACR55_RS12900 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ACR55_RS12905 PF03618 Kinase/pyrophosphorylase ACR55_RS12915 PF00588 SpoU rRNA Methylase family ACR55_RS12915 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACR55_RS12920 PF01351 Ribonuclease HII ACR55_RS12925 PF02684 Lipid-A-disaccharide synthetase ACR55_RS12930 PF00132 Bacterial transferase hexapeptide (six repeats) ACR55_RS12930 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ACR55_RS12935 PF07977 FabA-like domain ACR55_RS12940 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ACR55_RS12940 PF00132 Bacterial transferase hexapeptide (six repeats) ACR55_RS12940 PF14602 Hexapeptide repeat of succinyl-transferase ACR55_RS12945 PF03938 Outer membrane protein (OmpH-like) ACR55_RS12950 PF01103 Surface antigen ACR55_RS12950 PF07244 Surface antigen variable number repeat ACR55_RS12955 PF02163 Peptidase family M50 ACR55_RS12955 PF17820 PDZ domain ACR55_RS12960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACR55_RS12960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACR55_RS12960 PF13288 DXP reductoisomerase C-terminal domain ACR55_RS12970 PF01255 Putative undecaprenyl diphosphate synthase ACR55_RS12975 PF01765 Ribosome recycling factor ACR55_RS12980 PF00696 Amino acid kinase family ACR55_RS12985 PF00889 Elongation factor TS ACR55_RS12990 PF00318 Ribosomal protein S2 ACR55_RS12995 PF00557 Metallopeptidase family M24 ACR55_RS13000 PF01842 ACT domain ACR55_RS13000 PF01909 Nucleotidyltransferase domain ACR55_RS13000 PF01966 HD domain ACR55_RS13000 PF08335 GlnD PII-uridylyltransferase ACR55_RS13015 PF00156 Phosphoribosyl transferase domain ACR55_RS13020 PF02674 Colicin V production protein ACR55_RS13030 PF08245 Mur ligase middle domain ACR55_RS13030 PF02875 Mur ligase family, glutamate ligase domain ACR55_RS13040 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS13045 PF02515 CoA-transferase family III ACR55_RS13050 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS13050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS13050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS13065 PF07196 Flagellin hook IN motif ACR55_RS13065 PF02465 Flagellar hook-associated protein 2 N-terminus ACR55_RS13065 PF07195 Flagellar hook-associated protein 2 C-terminus ACR55_RS13070 PF02561 Flagellar protein FliS ACR55_RS13075 PF05400 Flagellar protein FliT ACR55_RS13085 PF01312 FlhB HrpN YscU SpaS Family ACR55_RS13095 PF02049 Flagellar hook-basal body complex protein FliE ACR55_RS13100 PF01514 Secretory protein of YscJ/FliF family ACR55_RS13100 PF08345 Flagellar M-ring protein C-terminal ACR55_RS13105 PF14841 FliG middle domain ACR55_RS13105 PF14842 FliG N-terminal domain ACR55_RS13105 PF01706 FliG C-terminal domain ACR55_RS13110 PF02108 Flagellar assembly protein FliH ACR55_RS13115 PF18269 T3SS EscN ATPase C-terminal domain ACR55_RS13115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACR55_RS13120 PF02050 Flagellar FliJ protein ACR55_RS13130 PF03748 Flagellar basal body-associated protein FliL ACR55_RS13135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACR55_RS13135 PF02154 Flagellar motor switch protein FliM ACR55_RS13140 PF16973 Flagellar motor switch protein FliN N-terminal ACR55_RS13140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACR55_RS13145 PF04347 Flagellar biosynthesis protein, FliO ACR55_RS13150 PF00813 FliP family ACR55_RS13155 PF01313 Bacterial export proteins, family 3 ACR55_RS13160 PF01311 Bacterial export proteins, family 1 ACR55_RS13165 PF02203 Tar ligand binding domain homologue ACR55_RS13165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS13165 PF00672 HAMP domain ACR55_RS13170 PF00672 HAMP domain ACR55_RS13170 PF02203 Tar ligand binding domain homologue ACR55_RS13170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS13180 PF00672 HAMP domain ACR55_RS13180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS13180 PF02203 Tar ligand binding domain homologue ACR55_RS13185 PF00672 HAMP domain ACR55_RS13185 PF02203 Tar ligand binding domain homologue ACR55_RS13185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS13190 PF00669 Bacterial flagellin N-terminal helical region ACR55_RS13195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACR55_RS13195 PF00460 Flagella basal body rod protein ACR55_RS13200 PF10135 Rod binding protein ACR55_RS13200 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ACR55_RS13205 PF02119 Flagellar P-ring protein ACR55_RS13210 PF02107 Flagellar L-ring protein ACR55_RS13215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACR55_RS13215 PF00460 Flagella basal body rod protein ACR55_RS13220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACR55_RS13220 PF00460 Flagella basal body rod protein ACR55_RS13225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACR55_RS13225 PF00460 Flagella basal body rod protein ACR55_RS13225 PF07559 Flagellar basal body protein FlaE ACR55_RS13230 PF13860 FlgD Ig-like domain ACR55_RS13230 PF13861 FlgD Tudor-like domain ACR55_RS13230 PF03963 Flagellar hook capping protein - N-terminal region ACR55_RS13235 PF00460 Flagella basal body rod protein ACR55_RS13235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACR55_RS13240 PF00460 Flagella basal body rod protein ACR55_RS13245 PF13144 Chaperone for flagella basal body P-ring formation ACR55_RS13245 PF17656 FlgA N-terminal domain ACR55_RS13250 PF04316 Anti-sigma-28 factor, FlgM ACR55_RS13260 PF00448 SRP54-type protein, GTPase domain ACR55_RS13265 PF00771 FHIPEP family ACR55_RS13270 PF01312 FlhB HrpN YscU SpaS Family ACR55_RS13275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS13275 PF00672 HAMP domain ACR55_RS13275 PF17200 Single Cache domain 2 ACR55_RS13280 PF04344 Chemotaxis phosphatase, CheZ ACR55_RS13285 PF00072 Response regulator receiver domain ACR55_RS13290 PF01339 CheB methylesterase ACR55_RS13290 PF00072 Response regulator receiver domain ACR55_RS13295 PF03705 CheR methyltransferase, all-alpha domain ACR55_RS13295 PF01739 CheR methyltransferase, SAM binding domain ACR55_RS13300 PF02203 Tar ligand binding domain homologue ACR55_RS13300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS13300 PF00672 HAMP domain ACR55_RS13305 PF01584 CheW-like domain ACR55_RS13310 PF01627 Hpt domain ACR55_RS13310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS13310 PF02895 Signal transducing histidine kinase, homodimeric domain ACR55_RS13310 PF01584 CheW-like domain ACR55_RS13310 PF09078 CheY binding ACR55_RS13315 PF00072 Response regulator receiver domain ACR55_RS13320 PF00691 OmpA family ACR55_RS13320 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACR55_RS13325 PF01618 MotA/TolQ/ExbB proton channel family ACR55_RS13330 PF05280 Flagellar transcriptional activator (FlhC) ACR55_RS13335 PF05247 Flagellar transcriptional activator (FlhD) ACR55_RS13340 PF04545 Sigma-70, region 4 ACR55_RS13340 PF04542 Sigma-70 region 2 ACR55_RS13340 PF04539 Sigma-70 region 3 ACR55_RS13345 PF00700 Bacterial flagellin C-terminal helical region ACR55_RS13345 PF08884 Flagellin D3 domain ACR55_RS13345 PF00669 Bacterial flagellin N-terminal helical region ACR55_RS13350 PF18254 HMW1 domain 2 ACR55_RS13350 PF18071 HMW1C N-terminal ACR55_RS13360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACR55_RS13360 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS13365 PF02817 e3 binding domain ACR55_RS13365 PF00364 Biotin-requiring enzyme ACR55_RS13365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACR55_RS13370 PF00456 Transketolase, thiamine diphosphate binding domain ACR55_RS13370 PF17831 Pyruvate dehydrogenase E1 component middle domain ACR55_RS13375 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS13375 PF00989 PAS fold ACR55_RS13380 PF00196 Bacterial regulatory proteins, luxR family ACR55_RS13380 PF00072 Response regulator receiver domain ACR55_RS13385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACR55_RS13385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACR55_RS13390 PF01432 Peptidase family M3 ACR55_RS13395 PF13847 Methyltransferase domain ACR55_RS13400 PF02630 SCO1/SenC ACR55_RS13415 PF02321 Outer membrane efflux protein ACR55_RS13420 PF00873 AcrB/AcrD/AcrF family ACR55_RS13425 PF00529 HlyD membrane-fusion protein of T1SS ACR55_RS13425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS13430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS13430 PF03466 LysR substrate binding domain ACR55_RS13435 PF01479 S4 domain ACR55_RS13435 PF00849 RNA pseudouridylate synthase ACR55_RS13440 PF04345 Chorismate lyase ACR55_RS13445 PF07152 YaeQ protein ACR55_RS13450 PF01810 LysE type translocator ACR55_RS13460 PF00005 ABC transporter ACR55_RS13460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS13465 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS13465 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS13470 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS13475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS13485 PF03466 LysR substrate binding domain ACR55_RS13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS13490 PF00082 Subtilase family ACR55_RS13490 PF03797 Autotransporter beta-domain ACR55_RS13490 PF12951 Passenger-associated-transport-repeat ACR55_RS13495 PF00543 Nitrogen regulatory protein P-II ACR55_RS13500 PF00795 Carbon-nitrogen hydrolase ACR55_RS13500 PF02540 NAD synthase ACR55_RS13505 PF00924 Mechanosensitive ion channel ACR55_RS13510 PF00206 Lyase ACR55_RS13510 PF14698 Argininosuccinate lyase C-terminal ACR55_RS13515 PF00881 Nitroreductase family ACR55_RS13520 PF13411 MerR HTH family regulatory protein ACR55_RS13525 PF00403 Heavy-metal-associated domain ACR55_RS13530 PF01435 Peptidase family M48 ACR55_RS13535 PF08386 TAP-like protein ACR55_RS13535 PF00561 alpha/beta hydrolase fold ACR55_RS13545 PF00005 ABC transporter ACR55_RS13550 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS13560 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS13565 PF02515 CoA-transferase family III ACR55_RS13570 PF01425 Amidase ACR55_RS13575 PF07729 FCD domain ACR55_RS13575 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS13595 PF12852 Cupin ACR55_RS13595 PF12833 Helix-turn-helix domain ACR55_RS13615 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS13620 PF00920 Dehydratase family ACR55_RS13630 PF03466 LysR substrate binding domain ACR55_RS13630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS13635 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ACR55_RS13635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACR55_RS13635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACR55_RS13640 PF05853 beta-keto acid cleavage enzyme ACR55_RS13645 PF01266 FAD dependent oxidoreductase ACR55_RS13650 PF02082 Transcriptional regulator ACR55_RS13655 PF00175 Oxidoreductase NAD-binding domain ACR55_RS13655 PF00042 Globin ACR55_RS13655 PF00970 Oxidoreductase FAD-binding domain ACR55_RS13665 PF11799 impB/mucB/samB family C-terminal domain ACR55_RS13665 PF00817 impB/mucB/samB family ACR55_RS13680 PF00326 Prolyl oligopeptidase family ACR55_RS13685 PF00905 Penicillin binding protein transpeptidase domain ACR55_RS13685 PF17092 Penicillin-binding protein OB-like domain ACR55_RS13685 PF00912 Transglycosylase ACR55_RS13690 PF00149 Calcineurin-like phosphoesterase ACR55_RS13705 PF00248 Aldo/keto reductase family ACR55_RS13710 PF00248 Aldo/keto reductase family ACR55_RS13715 PF00005 ABC transporter ACR55_RS13715 PF00664 ABC transporter transmembrane region ACR55_RS13765 PF01037 Lrp/AsnC ligand binding domain ACR55_RS13790 PF02028 BCCT, betaine/carnitine/choline family transporter ACR55_RS13820 PF00216 Bacterial DNA-binding protein ACR55_RS13825 PF03484 tRNA synthetase B5 domain ACR55_RS13825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACR55_RS13825 PF03483 B3/4 domain ACR55_RS13825 PF01588 Putative tRNA binding domain ACR55_RS13825 PF03147 Ferredoxin-fold anticodon binding domain ACR55_RS13830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACR55_RS13830 PF01409 tRNA synthetases class II core domain (F) ACR55_RS13835 PF00453 Ribosomal protein L20 ACR55_RS13840 PF01632 Ribosomal protein L35 ACR55_RS13845 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACR55_RS13845 PF01078 Magnesium chelatase, subunit ChlI ACR55_RS13850 PF04380 Membrane fusogenic activity ACR55_RS13855 PF00543 Nitrogen regulatory protein P-II ACR55_RS13860 PF00909 Ammonium Transporter Family ACR55_RS13870 PF07690 Major Facilitator Superfamily ACR55_RS13875 PF00005 ABC transporter ACR55_RS13880 PF00005 ABC transporter ACR55_RS13880 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS13885 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS13885 PF11862 Domain of unknown function (DUF3382) ACR55_RS13890 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS13895 PF13458 Periplasmic binding protein ACR55_RS13900 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ACR55_RS13900 PF00171 Aldehyde dehydrogenase family ACR55_RS13900 PF01619 Proline dehydrogenase ACR55_RS13900 PF14850 DNA-binding domain of Proline dehydrogenase ACR55_RS13910 PF02470 MlaD protein ACR55_RS13915 PF04403 Paraquat-inducible protein A ACR55_RS13920 PF07724 AAA domain (Cdc48 subfamily) ACR55_RS13920 PF17871 AAA lid domain ACR55_RS13920 PF02861 Clp amino terminal domain, pathogenicity island component ACR55_RS13920 PF10431 C-terminal, D2-small domain, of ClpB protein ACR55_RS13920 PF00004 ATPase family associated with various cellular activities (AAA) ACR55_RS13925 PF00905 Penicillin binding protein transpeptidase domain ACR55_RS13925 PF00912 Transglycosylase ACR55_RS13925 PF06832 Penicillin-Binding Protein C-terminus Family ACR55_RS13930 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ACR55_RS13930 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ACR55_RS13930 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ACR55_RS13930 PF07703 Alpha-2-macroglobulin bait region domain ACR55_RS13930 PF00207 Alpha-2-macroglobulin family ACR55_RS13930 PF17962 Bacterial macroglobulin domain 6 ACR55_RS13930 PF01835 MG2 domain ACR55_RS13930 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ACR55_RS13935 PF02617 ATP-dependent Clp protease adaptor protein ClpS ACR55_RS13940 PF00313 'Cold-shock' DNA-binding domain ACR55_RS13950 PF02803 Thiolase, C-terminal domain ACR55_RS13950 PF00108 Thiolase, N-terminal domain ACR55_RS13955 PF00654 Voltage gated chloride channel ACR55_RS13960 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACR55_RS13960 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACR55_RS13965 PF13742 OB-fold nucleic acid binding domain ACR55_RS13965 PF02601 Exonuclease VII, large subunit ACR55_RS13970 PF01618 MotA/TolQ/ExbB proton channel family ACR55_RS13975 PF02472 Biopolymer transport protein ExbD/TolR ACR55_RS13980 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ACR55_RS13985 PF03966 Trm112p-like protein ACR55_RS13990 PF02348 Cytidylyltransferase ACR55_RS13995 PF05191 Adenylate kinase, active site lid ACR55_RS14000 PF00106 short chain dehydrogenase ACR55_RS14005 PF03023 Lipid II flippase MurJ ACR55_RS14015 PF00732 GMC oxidoreductase ACR55_RS14015 PF05199 GMC oxidoreductase ACR55_RS14020 PF00034 Cytochrome c ACR55_RS14030 PF01649 Ribosomal protein S20 ACR55_RS14035 PF03328 HpcH/HpaI aldolase/citrate lyase family ACR55_RS14040 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS14045 PF00920 Dehydratase family ACR55_RS14055 PF07729 FCD domain ACR55_RS14055 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS14065 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS14070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS14070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS14080 PF00202 Aminotransferase class-III ACR55_RS14085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACR55_RS14085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACR55_RS14090 PF00764 Arginosuccinate synthase ACR55_RS14100 PF02705 K+ potassium transporter ACR55_RS14105 PF08521 Two-component sensor kinase N-terminal ACR55_RS14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS14105 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS14110 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS14110 PF00072 Response regulator receiver domain ACR55_RS14115 PF02472 Biopolymer transport protein ExbD/TolR ACR55_RS14120 PF01618 MotA/TolQ/ExbB proton channel family ACR55_RS14135 PF00216 Bacterial DNA-binding protein ACR55_RS14140 PF01053 Cys/Met metabolism PLP-dependent enzyme ACR55_RS14145 PF00588 SpoU rRNA Methylase family ACR55_RS14145 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACR55_RS14150 PF00773 RNB domain ACR55_RS14150 PF08461 Ribonuclease R winged-helix domain ACR55_RS14150 PF00575 S1 RNA binding domain ACR55_RS14150 PF08206 Ribonuclease B OB domain ACR55_RS14150 PF17876 Cold shock domain ACR55_RS14175 PF13673 Acetyltransferase (GNAT) domain ACR55_RS14180 PF03547 Membrane transport protein ACR55_RS14185 PF02040 Arsenical pump membrane protein ACR55_RS14190 PF04143 Sulphur transport ACR55_RS14195 PF01645 Conserved region in glutamate synthase ACR55_RS14200 PF13091 PLD-like domain ACR55_RS14200 PF13396 Phospholipase_D-nuclease N-terminal ACR55_RS14210 PF10017 Histidine-specific methyltransferase, SAM-dependent ACR55_RS14215 PF12867 DinB superfamily ACR55_RS14215 PF03781 Sulfatase-modifying factor enzyme 1 ACR55_RS14235 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS14240 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS14250 PF13302 Acetyltransferase (GNAT) domain ACR55_RS14260 PF01594 AI-2E family transporter ACR55_RS14280 PF01322 Cytochrome C' ACR55_RS14285 PF00206 Lyase ACR55_RS14285 PF08328 Adenylosuccinate lyase C-terminal ACR55_RS14290 PF13417 Glutathione S-transferase, N-terminal domain ACR55_RS14290 PF00043 Glutathione S-transferase, C-terminal domain ACR55_RS14295 PF01925 Sulfite exporter TauE/SafE ACR55_RS14305 PF03466 LysR substrate binding domain ACR55_RS14305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS14310 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS14320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACR55_RS14320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACR55_RS14325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ACR55_RS14330 PF02233 NAD(P) transhydrogenase beta subunit ACR55_RS14335 PF13183 4Fe-4S dicluster domain ACR55_RS14335 PF02754 Cysteine-rich domain ACR55_RS14340 PF01565 FAD binding domain ACR55_RS14345 PF02913 FAD linked oxidases, C-terminal domain ACR55_RS14345 PF01565 FAD binding domain ACR55_RS14350 PF02913 FAD linked oxidases, C-terminal domain ACR55_RS14350 PF01565 FAD binding domain ACR55_RS14355 PF00793 DAHP synthetase I family ACR55_RS14360 PF01523 Putative modulator of DNA gyrase ACR55_RS14365 PF00816 H-NS histone family ACR55_RS14375 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ACR55_RS14375 PF11940 Domain of unknown function (DUF3458) Ig-like fold ACR55_RS14375 PF01433 Peptidase family M1 domain ACR55_RS14380 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ACR55_RS14390 PF00291 Pyridoxal-phosphate dependent enzyme ACR55_RS14390 PF14821 Threonine synthase N terminus ACR55_RS14395 PF03447 Homoserine dehydrogenase, NAD binding domain ACR55_RS14395 PF00742 Homoserine dehydrogenase ACR55_RS14395 PF01842 ACT domain ACR55_RS14400 PF00155 Aminotransferase class I and II ACR55_RS14405 PF04430 Protein of unknown function (DUF498/DUF598) ACR55_RS14410 PF00578 AhpC/TSA family ACR55_RS14415 PF13638 PIN domain ACR55_RS14415 PF02562 PhoH-like protein ACR55_RS14420 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ACR55_RS14425 PF13593 SBF-like CPA transporter family (DUF4137) ACR55_RS14430 PF03796 DnaB-like helicase C terminal domain ACR55_RS14430 PF00772 DnaB-like helicase N terminal domain ACR55_RS14440 PF01281 Ribosomal protein L9, N-terminal domain ACR55_RS14440 PF03948 Ribosomal protein L9, C-terminal domain ACR55_RS14445 PF01084 Ribosomal protein S18 ACR55_RS14455 PF01250 Ribosomal protein S6 ACR55_RS14460 PF02649 Type I GTP cyclohydrolase folE2 ACR55_RS14465 PF02780 Transketolase, C-terminal domain ACR55_RS14465 PF02779 Transketolase, pyrimidine binding domain ACR55_RS14465 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACR55_RS14470 PF00348 Polyprenyl synthetase ACR55_RS14475 PF02609 Exonuclease VII small subunit ACR55_RS14485 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS14505 PF00581 Rhodanese-like domain ACR55_RS14515 PF01435 Peptidase family M48 ACR55_RS14520 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS14520 PF00107 Zinc-binding dehydrogenase ACR55_RS14535 PF01047 MarR family ACR55_RS14540 PF02321 Outer membrane efflux protein ACR55_RS14545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS14545 PF00529 HlyD membrane-fusion protein of T1SS ACR55_RS14550 PF07690 Major Facilitator Superfamily ACR55_RS14555 PF00180 Isocitrate/isopropylmalate dehydrogenase ACR55_RS14560 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS14560 PF00155 Aminotransferase class I and II ACR55_RS14565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS14570 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS14575 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS14575 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS14580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS14580 PF00005 ABC transporter ACR55_RS14585 PF00202 Aminotransferase class-III ACR55_RS14590 PF07883 Cupin domain ACR55_RS14595 PF00850 Histone deacetylase domain ACR55_RS14600 PF07687 Peptidase dimerisation domain ACR55_RS14600 PF01546 Peptidase family M20/M25/M40 ACR55_RS14610 PF00171 Aldehyde dehydrogenase family ACR55_RS14615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS14620 PF00202 Aminotransferase class-III ACR55_RS14625 PF05872 Bacterial protein of unknown function (DUF853) ACR55_RS14630 PF01709 Transcriptional regulator ACR55_RS14635 PF02843 Phosphoribosylglycinamide synthetase, C domain ACR55_RS14635 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACR55_RS14635 PF02844 Phosphoribosylglycinamide synthetase, N domain ACR55_RS14640 PF01218 Coproporphyrinogen III oxidase ACR55_RS14645 PF01467 Cytidylyltransferase-like ACR55_RS14655 PF02590 Predicted SPOUT methyltransferase ACR55_RS14660 PF02545 Maf-like protein ACR55_RS14665 PF00375 Sodium:dicarboxylate symporter family ACR55_RS14670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS14670 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS14675 PF00072 Response regulator receiver domain ACR55_RS14675 PF02954 Bacterial regulatory protein, Fis family ACR55_RS14675 PF00158 Sigma-54 interaction domain ACR55_RS14680 PF00291 Pyridoxal-phosphate dependent enzyme ACR55_RS14685 PF13309 HTH domain ACR55_RS14685 PF08348 YheO-like PAS domain ACR55_RS14700 PF01966 HD domain ACR55_RS14705 PF10119 Predicted methyltransferase regulatory domain ACR55_RS14705 PF13847 Methyltransferase domain ACR55_RS14710 PF00083 Sugar (and other) transporter ACR55_RS14710 PF07690 Major Facilitator Superfamily ACR55_RS14715 PF00850 Histone deacetylase domain ACR55_RS14720 PF03466 LysR substrate binding domain ACR55_RS14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS14750 PF10150 Ribonuclease E/G family ACR55_RS14750 PF00575 S1 RNA binding domain ACR55_RS14755 PF03797 Autotransporter beta-domain ACR55_RS14760 PF00005 ABC transporter ACR55_RS14760 PF00664 ABC transporter transmembrane region ACR55_RS14775 PF03692 Putative zinc- or iron-chelating domain ACR55_RS14780 PF13439 Glycosyltransferase Family 4 ACR55_RS14780 PF00534 Glycosyl transferases group 1 ACR55_RS14790 PF13439 Glycosyltransferase Family 4 ACR55_RS14790 PF00534 Glycosyl transferases group 1 ACR55_RS14795 PF00535 Glycosyl transferase family 2 ACR55_RS14800 PF01522 Polysaccharide deacetylase ACR55_RS14805 PF13439 Glycosyltransferase Family 4 ACR55_RS14805 PF00534 Glycosyl transferases group 1 ACR55_RS14810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACR55_RS14810 PF14579 Helix-hairpin-helix motif ACR55_RS14810 PF02811 PHP domain ACR55_RS14810 PF01336 OB-fold nucleic acid binding domain ACR55_RS14810 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACR55_RS14820 PF11898 Domain of unknown function (DUF3418) ACR55_RS14820 PF00271 Helicase conserved C-terminal domain ACR55_RS14820 PF04408 Helicase associated domain (HA2) ACR55_RS14820 PF00270 DEAD/DEAH box helicase ACR55_RS14820 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ACR55_RS14825 PF00583 Acetyltransferase (GNAT) family ACR55_RS14825 PF00696 Amino acid kinase family ACR55_RS14830 PF04362 Bacterial Fe(2+) trafficking ACR55_RS14835 PF01895 PhoU domain ACR55_RS14840 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ACR55_RS14845 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS14845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS14845 PF18158 Adaptive response protein AidB N-terminal domain ACR55_RS14850 PF02646 RmuC family ACR55_RS14860 PF02245 Methylpurine-DNA glycosylase (MPG) ACR55_RS14865 PF03960 ArsC family ACR55_RS14870 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS14875 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS14880 PF00005 ABC transporter ACR55_RS14880 PF08402 TOBE domain ACR55_RS14885 PF13416 Bacterial extracellular solute-binding protein ACR55_RS14905 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS14915 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ACR55_RS14915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ACR55_RS14920 PF07729 FCD domain ACR55_RS14920 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS14925 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS14935 PF00072 Response regulator receiver domain ACR55_RS14940 PF00072 Response regulator receiver domain ACR55_RS14940 PF00989 PAS fold ACR55_RS14940 PF01627 Hpt domain ACR55_RS14940 PF18415 Histidine kinase receptor ArcB trans-membrane domain ACR55_RS14940 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS14950 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS14950 PF11862 Domain of unknown function (DUF3382) ACR55_RS14960 PF00005 ABC transporter ACR55_RS14960 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS14965 PF00005 ABC transporter ACR55_RS14970 PF03069 Acetamidase/Formamidase family ACR55_RS14980 PF14535 AMP-binding enzyme C-terminal domain ACR55_RS14980 PF00501 AMP-binding enzyme ACR55_RS14985 PF03061 Thioesterase superfamily ACR55_RS14990 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS14995 PF00171 Aldehyde dehydrogenase family ACR55_RS15000 PF00970 Oxidoreductase FAD-binding domain ACR55_RS15000 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS15000 PF00175 Oxidoreductase NAD-binding domain ACR55_RS15005 PF01883 Iron-sulfur cluster assembly protein ACR55_RS15010 PF05138 Phenylacetic acid catabolic protein ACR55_RS15015 PF06243 Phenylacetic acid degradation B ACR55_RS15020 PF05138 Phenylacetic acid catabolic protein ACR55_RS15030 PF03853 YjeF-related protein N-terminus ACR55_RS15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS15035 PF03466 LysR substrate binding domain ACR55_RS15045 PF00857 Isochorismatase family ACR55_RS15050 PF00929 Exonuclease ACR55_RS15055 PF01435 Peptidase family M48 ACR55_RS15060 PF03193 RsgA GTPase ACR55_RS15065 PF01261 Xylose isomerase-like TIM barrel ACR55_RS15070 PF00293 NUDIX domain ACR55_RS15075 PF01245 Ribosomal protein L19 ACR55_RS15090 PF04055 Radical SAM superfamily ACR55_RS15095 PF00009 Elongation factor Tu GTP binding domain ACR55_RS15100 PF01507 Phosphoadenosine phosphosulfate reductase family ACR55_RS15105 PF01507 Phosphoadenosine phosphosulfate reductase family ACR55_RS15110 PF00005 ABC transporter ACR55_RS15110 PF17850 CysA C-terminal regulatory domain ACR55_RS15110 PF12857 TOBE-like domain ACR55_RS15115 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS15120 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS15130 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACR55_RS15130 PF00578 AhpC/TSA family ACR55_RS15135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS15135 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS15135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS15135 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACR55_RS15140 PF06826 Predicted Permease Membrane Region ACR55_RS15140 PF02080 TrkA-C domain ACR55_RS15145 PF00766 Electron transfer flavoprotein FAD-binding domain ACR55_RS15145 PF01012 Electron transfer flavoprotein domain ACR55_RS15155 PF00850 Histone deacetylase domain ACR55_RS15160 PF13406 Transglycosylase SLT domain ACR55_RS15165 PF00291 Pyridoxal-phosphate dependent enzyme ACR55_RS15170 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACR55_RS15170 PF02811 PHP domain ACR55_RS15170 PF14579 Helix-hairpin-helix motif ACR55_RS15170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACR55_RS15175 PF01370 NAD dependent epimerase/dehydratase family ACR55_RS15180 PF00294 pfkB family carbohydrate kinase ACR55_RS15185 PF18073 Rubredoxin metal binding domain ACR55_RS15195 PF00216 Bacterial DNA-binding protein ACR55_RS15200 PF00575 S1 RNA binding domain ACR55_RS15205 PF02224 Cytidylate kinase ACR55_RS15210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACR55_RS15215 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACR55_RS15215 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACR55_RS15220 PF00155 Aminotransferase class I and II ACR55_RS15225 PF01842 ACT domain ACR55_RS15225 PF00800 Prephenate dehydratase ACR55_RS15225 PF01817 Chorismate mutase type II ACR55_RS15230 PF00266 Aminotransferase class-V ACR55_RS15235 PF03989 DNA gyrase C-terminal domain, beta-propeller ACR55_RS15235 PF00521 DNA gyrase/topoisomerase IV, subunit A ACR55_RS15240 PF00691 OmpA family ACR55_RS15250 PF13419 Haloacid dehalogenase-like hydrolase ACR55_RS15255 PF07690 Major Facilitator Superfamily ACR55_RS15265 PF12697 Alpha/beta hydrolase family ACR55_RS15270 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS15280 PF00171 Aldehyde dehydrogenase family ACR55_RS15305 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS15305 PF07694 5TMR of 5TMR-LYT ACR55_RS15310 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS15315 PF00582 Universal stress protein family ACR55_RS15325 PF13406 Transglycosylase SLT domain ACR55_RS15330 PF04305 Protein of unknown function (DUF455) ACR55_RS15335 PF00534 Glycosyl transferases group 1 ACR55_RS15335 PF08323 Starch synthase catalytic domain ACR55_RS15345 PF00664 ABC transporter transmembrane region ACR55_RS15345 PF00005 ABC transporter ACR55_RS15350 PF08443 RimK-like ATP-grasp domain ACR55_RS15350 PF02875 Mur ligase family, glutamate ligase domain ACR55_RS15350 PF08245 Mur ligase middle domain ACR55_RS15355 PF02875 Mur ligase family, glutamate ligase domain ACR55_RS15355 PF08443 RimK-like ATP-grasp domain ACR55_RS15355 PF08245 Mur ligase middle domain ACR55_RS15360 PF01292 Prokaryotic cytochrome b561 ACR55_RS15365 PF05532 CsbD-like ACR55_RS15375 PF04972 BON domain ACR55_RS15380 PF02567 Phenazine biosynthesis-like protein ACR55_RS15390 PF03239 Iron permease FTR1 family ACR55_RS15400 PF10634 Fe2+ transport protein ACR55_RS15405 PF05233 PHB accumulation regulatory domain ACR55_RS15405 PF07879 PHB/PHA accumulation regulator DNA-binding domain ACR55_RS15410 PF00106 short chain dehydrogenase ACR55_RS15415 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ACR55_RS15420 PF02578 Multi-copper polyphenol oxidoreductase laccase ACR55_RS15425 PF00849 RNA pseudouridylate synthase ACR55_RS15425 PF01479 S4 domain ACR55_RS15430 PF13525 Outer membrane lipoprotein ACR55_RS15450 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS15455 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS15460 PF03466 LysR substrate binding domain ACR55_RS15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS15465 PF13307 Helicase C-terminal domain ACR55_RS15465 PF04851 Type III restriction enzyme, res subunit ACR55_RS15470 PF09371 Tex-like protein N-terminal domain ACR55_RS15470 PF17674 HHH domain ACR55_RS15470 PF16921 Tex protein YqgF-like domain ACR55_RS15470 PF00575 S1 RNA binding domain ACR55_RS15475 PF00579 tRNA synthetases class I (W and Y) ACR55_RS15495 PF03969 AFG1-like ATPase ACR55_RS15500 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS15500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACR55_RS15505 PF00364 Biotin-requiring enzyme ACR55_RS15505 PF02817 e3 binding domain ACR55_RS15505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACR55_RS15510 PF16870 2-oxoglutarate dehydrogenase C-terminal ACR55_RS15510 PF00676 Dehydrogenase E1 component ACR55_RS15510 PF02779 Transketolase, pyrimidine binding domain ACR55_RS15510 PF16078 2-oxoglutarate dehydrogenase N-terminus ACR55_RS15515 PF03169 OPT oligopeptide transporter protein ACR55_RS15520 PF17831 Pyruvate dehydrogenase E1 component middle domain ACR55_RS15520 PF00456 Transketolase, thiamine diphosphate binding domain ACR55_RS15525 PF03949 Malic enzyme, NAD binding domain ACR55_RS15525 PF00390 Malic enzyme, N-terminal domain ACR55_RS15525 PF01515 Phosphate acetyl/butaryl transferase ACR55_RS15530 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS15530 PF00593 TonB dependent receptor ACR55_RS15535 PF18331 PKHD-type hydroxylase C-terminal domain ACR55_RS15535 PF13640 2OG-Fe(II) oxygenase superfamily ACR55_RS15565 PF13419 Haloacid dehalogenase-like hydrolase ACR55_RS15575 PF08402 TOBE domain ACR55_RS15575 PF00005 ABC transporter ACR55_RS15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS15580 PF03466 LysR substrate binding domain ACR55_RS15585 PF00285 Citrate synthase, C-terminal domain ACR55_RS15590 PF03937 Flavinator of succinate dehydrogenase ACR55_RS15595 PF13085 2Fe-2S iron-sulfur cluster binding domain ACR55_RS15600 PF02910 Fumarate reductase flavoprotein C-term ACR55_RS15600 PF00890 FAD binding domain ACR55_RS15605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACR55_RS15610 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACR55_RS15615 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS15615 PF07702 UTRA domain ACR55_RS15620 PF00056 lactate/malate dehydrogenase, NAD binding domain ACR55_RS15620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACR55_RS15630 PF00285 Citrate synthase, C-terminal domain ACR55_RS15635 PF03972 MmgE/PrpD family ACR55_RS15640 PF03653 Uncharacterised protein family (UPF0093) ACR55_RS15645 PF01170 Putative RNA methylase family UPF0020 ACR55_RS15645 PF02926 THUMP domain ACR55_RS15660 PF00149 Calcineurin-like phosphoesterase ACR55_RS15665 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS15665 PF00501 AMP-binding enzyme ACR55_RS15665 PF16177 Acetyl-coenzyme A synthetase N-terminus ACR55_RS15670 PF00132 Bacterial transferase hexapeptide (six repeats) ACR55_RS15675 PF01430 Hsp33 protein ACR55_RS15685 PF04977 Septum formation initiator ACR55_RS15690 PF03952 Enolase, N-terminal domain ACR55_RS15690 PF00113 Enolase, C-terminal TIM barrel domain ACR55_RS15700 PF06418 CTP synthase N-terminus ACR55_RS15700 PF00117 Glutamine amidotransferase class-I ACR55_RS15705 PF00557 Metallopeptidase family M24 ACR55_RS15705 PF01321 Creatinase/Prolidase N-terminal domain ACR55_RS15715 PF03576 Peptidase family S58 ACR55_RS15720 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS15720 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS15725 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS15730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS15735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS15735 PF00005 ABC transporter ACR55_RS15740 PF01112 Asparaginase ACR55_RS15750 PF01144 Coenzyme A transferase ACR55_RS15755 PF01144 Coenzyme A transferase ACR55_RS15780 PF01212 Beta-eliminating lyase ACR55_RS15790 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS15790 PF00501 AMP-binding enzyme ACR55_RS15790 PF16177 Acetyl-coenzyme A synthetase N-terminus ACR55_RS15800 PF03928 Haem-degrading ACR55_RS15805 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS15805 PF16177 Acetyl-coenzyme A synthetase N-terminus ACR55_RS15805 PF00501 AMP-binding enzyme ACR55_RS15810 PF00877 NlpC/P60 family ACR55_RS15820 PF03466 LysR substrate binding domain ACR55_RS15820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS15825 PF00171 Aldehyde dehydrogenase family ACR55_RS15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS15835 PF03466 LysR substrate binding domain ACR55_RS15845 PF00883 Cytosol aminopeptidase family, catalytic domain ACR55_RS15845 PF02789 Cytosol aminopeptidase family, N-terminal domain ACR55_RS15860 PF01027 Inhibitor of apoptosis-promoting Bax1 ACR55_RS15865 PF11967 Recombination protein O N terminal ACR55_RS15865 PF02565 Recombination protein O C terminal ACR55_RS15870 PF01926 50S ribosome-binding GTPase ACR55_RS15870 PF07650 KH domain ACR55_RS15875 PF14622 Ribonuclease-III-like ACR55_RS15875 PF00035 Double-stranded RNA binding motif ACR55_RS15880 PF10502 Signal peptidase, peptidase S26 ACR55_RS15885 PF00009 Elongation factor Tu GTP binding domain ACR55_RS15885 PF06421 GTP-binding protein LepA C-terminus ACR55_RS15885 PF00679 Elongation factor G C-terminus ACR55_RS15885 PF03144 Elongation factor Tu domain 2 ACR55_RS15890 PF13180 PDZ domain ACR55_RS15905 PF08281 Sigma-70, region 4 ACR55_RS15905 PF04542 Sigma-70 region 2 ACR55_RS15910 PF02801 Beta-ketoacyl synthase, C-terminal domain ACR55_RS15910 PF00109 Beta-ketoacyl synthase, N-terminal domain ACR55_RS15915 PF00550 Phosphopantetheine attachment site ACR55_RS15925 PF00698 Acyl transferase domain ACR55_RS15930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACR55_RS15930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACR55_RS15935 PF02504 Fatty acid synthesis protein ACR55_RS15940 PF01783 Ribosomal L32p protein family ACR55_RS15945 PF02620 Large ribosomal RNA subunit accumulation protein YceD ACR55_RS15950 PF02545 Maf-like protein ACR55_RS15955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACR55_RS15960 PF01510 N-acetylmuramoyl-L-alanine amidase ACR55_RS15965 PF01794 Ferric reductase like transmembrane component ACR55_RS15970 PF00174 Oxidoreductase molybdopterin binding domain ACR55_RS15975 PF13419 Haloacid dehalogenase-like hydrolase ACR55_RS15980 PF01479 S4 domain ACR55_RS15980 PF00849 RNA pseudouridylate synthase ACR55_RS15985 PF10150 Ribonuclease E/G family ACR55_RS15985 PF12111 Polyribonucleotide phosphorylase C terminal ACR55_RS15985 PF00575 S1 RNA binding domain ACR55_RS15990 PF09411 Lipid A 3-O-deacylase (PagL) ACR55_RS15995 PF17848 Acetyl-coA carboxylase zinc finger domain ACR55_RS15995 PF01039 Carboxyl transferase domain ACR55_RS16000 PF00290 Tryptophan synthase alpha chain ACR55_RS16005 PF00291 Pyridoxal-phosphate dependent enzyme ACR55_RS16010 PF07687 Peptidase dimerisation domain ACR55_RS16010 PF01546 Peptidase family M20/M25/M40 ACR55_RS16015 PF07690 Major Facilitator Superfamily ACR55_RS16020 PF04607 Region found in RelA / SpoT proteins ACR55_RS16020 PF13291 ACT domain ACR55_RS16020 PF02824 TGS domain ACR55_RS16025 PF06167 Glucose-regulated metallo-peptidase M90 ACR55_RS16035 PF01042 Endoribonuclease L-PSP ACR55_RS16040 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ACR55_RS16040 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ACR55_RS16045 PF11953 Domain of unknown function (DUF3470) ACR55_RS16045 PF00037 4Fe-4S binding domain ACR55_RS16050 PF00175 Oxidoreductase NAD-binding domain ACR55_RS16050 PF00970 Oxidoreductase FAD-binding domain ACR55_RS16060 PF04060 Putative Fe-S cluster ACR55_RS16065 PF00633 Helix-hairpin-helix motif ACR55_RS16065 PF00730 HhH-GPD superfamily base excision DNA repair protein ACR55_RS16065 PF10576 Iron-sulfur binding domain of endonuclease III ACR55_RS16070 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS16070 PF00005 ABC transporter ACR55_RS16075 PF00005 ABC transporter ACR55_RS16085 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS16100 PF01063 Amino-transferase class IV ACR55_RS16105 PF05506 Domain of unknown function (DUF756) ACR55_RS16105 PF04185 Phosphoesterase family ACR55_RS16110 PF00005 ABC transporter ACR55_RS16115 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS16115 PF00005 ABC transporter ACR55_RS16130 PF02632 BioY family ACR55_RS16135 PF02361 Cobalt transport protein ACR55_RS16140 PF00005 ABC transporter ACR55_RS16145 PF01641 SelR domain ACR55_RS16150 PF04279 Intracellular septation protein A ACR55_RS16160 PF02798 Glutathione S-transferase, N-terminal domain ACR55_RS16165 PF12833 Helix-turn-helix domain ACR55_RS16170 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS16175 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS16180 PF00005 ABC transporter ACR55_RS16185 PF01653 NAD-dependent DNA ligase adenylation domain ACR55_RS16185 PF12826 Helix-hairpin-helix motif ACR55_RS16185 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ACR55_RS16185 PF00533 BRCA1 C Terminus (BRCT) domain ACR55_RS16185 PF03120 NAD-dependent DNA ligase OB-fold domain ACR55_RS16195 PF02463 RecF/RecN/SMC N terminal domain ACR55_RS16195 PF06470 SMC proteins Flexible Hinge Domain ACR55_RS16200 PF07690 Major Facilitator Superfamily ACR55_RS16205 PF03167 Uracil DNA glycosylase superfamily ACR55_RS16210 PF00814 Glycoprotease family ACR55_RS16215 PF00072 Response regulator receiver domain ACR55_RS16215 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS16220 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS16220 PF00672 HAMP domain ACR55_RS16225 PF00578 AhpC/TSA family ACR55_RS16230 PF02627 Carboxymuconolactone decarboxylase family ACR55_RS16235 PF02542 YgbB family ACR55_RS16240 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACR55_RS16245 PF00270 DEAD/DEAH box helicase ACR55_RS16245 PF17757 UvrB interaction domain ACR55_RS16245 PF03461 TRCF domain ACR55_RS16245 PF02559 CarD-like/TRCF domain ACR55_RS16245 PF00271 Helicase conserved C-terminal domain ACR55_RS16260 PF00361 Proton-conducting membrane transporter ACR55_RS16265 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ACR55_RS16265 PF00361 Proton-conducting membrane transporter ACR55_RS16270 PF00361 Proton-conducting membrane transporter ACR55_RS16270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACR55_RS16275 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACR55_RS16280 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACR55_RS16285 PF12838 4Fe-4S dicluster domain ACR55_RS16290 PF00146 NADH dehydrogenase ACR55_RS16295 PF00384 Molybdopterin oxidoreductase ACR55_RS16295 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACR55_RS16295 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ACR55_RS16300 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACR55_RS16300 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACR55_RS16300 PF10531 SLBB domain ACR55_RS16310 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACR55_RS16315 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACR55_RS16320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACR55_RS16325 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACR55_RS16330 PF13609 Gram-negative porin ACR55_RS16350 PF01569 PAP2 superfamily ACR55_RS16360 PF02142 MGS-like domain ACR55_RS16360 PF00781 Diacylglycerol kinase catalytic domain ACR55_RS16365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS16365 PF03466 LysR substrate binding domain ACR55_RS16370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACR55_RS16370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACR55_RS16375 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS16385 PF03466 LysR substrate binding domain ACR55_RS16385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS16390 PF01638 HxlR-like helix-turn-helix ACR55_RS16415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS16420 PF07317 Flagellar regulator YcgR ACR55_RS16420 PF07238 PilZ domain ACR55_RS16425 PF00360 Phytochrome region ACR55_RS16425 PF00563 EAL domain ACR55_RS16425 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS16425 PF01590 GAF domain ACR55_RS16430 PF00072 Response regulator receiver domain ACR55_RS16430 PF01339 CheB methylesterase ACR55_RS16435 PF00072 Response regulator receiver domain ACR55_RS16435 PF01627 Hpt domain ACR55_RS16435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS16435 PF01584 CheW-like domain ACR55_RS16445 PF01739 CheR methyltransferase, SAM binding domain ACR55_RS16455 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ACR55_RS16455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS16470 PF01145 SPFH domain / Band 7 family ACR55_RS16480 PF00072 Response regulator receiver domain ACR55_RS16490 PF00999 Sodium/hydrogen exchanger family ACR55_RS16490 PF02254 TrkA-N domain ACR55_RS16500 PF12833 Helix-turn-helix domain ACR55_RS16525 PF03797 Autotransporter beta-domain ACR55_RS16555 PF00589 Phage integrase family ACR55_RS16565 PF04545 Sigma-70, region 4 ACR55_RS16565 PF04539 Sigma-70 region 3 ACR55_RS16565 PF04542 Sigma-70 region 2 ACR55_RS16565 PF00140 Sigma-70 factor, region 1.2 ACR55_RS16565 PF03979 Sigma-70 factor, region 1.1 ACR55_RS16565 PF04546 Sigma-70, non-essential region ACR55_RS16570 PF08278 DNA primase DnaG DnaB-binding ACR55_RS16570 PF08275 DNA primase catalytic core, N-terminal domain ACR55_RS16570 PF01807 CHC2 zinc finger ACR55_RS16570 PF10410 DnaB-helicase binding domain of primase ACR55_RS16575 PF01165 Ribosomal protein S21 ACR55_RS16585 PF00709 Adenylosuccinate synthetase ACR55_RS16590 PF13393 Histidyl-tRNA synthetase ACR55_RS16595 PF01145 SPFH domain / Band 7 family ACR55_RS16600 PF12221 Bacterial membrane protein N terminal ACR55_RS16600 PF01145 SPFH domain / Band 7 family ACR55_RS16605 PF16360 GTP-binding GTPase Middle Region ACR55_RS16605 PF01926 50S ribosome-binding GTPase ACR55_RS16605 PF13167 GTP-binding GTPase N-terminal ACR55_RS16610 PF17209 Hfq protein ACR55_RS16615 PF00155 Aminotransferase class I and II ACR55_RS16620 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACR55_RS16620 PF01926 50S ribosome-binding GTPase ACR55_RS16625 PF13360 PQQ-like domain ACR55_RS16630 PF09976 Tetratricopeptide repeat-like domain ACR55_RS16635 PF13393 Histidyl-tRNA synthetase ACR55_RS16635 PF03129 Anticodon binding domain ACR55_RS16640 PF04551 GcpE protein ACR55_RS16650 PF04055 Radical SAM superfamily ACR55_RS16655 PF00334 Nucleoside diphosphate kinase ACR55_RS16660 PF08264 Anticodon-binding domain of tRNA ACR55_RS16660 PF00133 tRNA synthetases class I (I, L, M and V) ACR55_RS16660 PF10458 Valyl tRNA synthetase tRNA binding arm ACR55_RS16665 PF01746 tRNA (Guanine-1)-methyltransferase ACR55_RS16670 PF01782 RimM N-terminal domain ACR55_RS16675 PF00886 Ribosomal protein S16 ACR55_RS16685 PF01206 Sulfurtransferase TusA ACR55_RS16690 PF02272 DHHA1 domain ACR55_RS16690 PF01411 tRNA synthetases class II (A) ACR55_RS16690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACR55_RS16735 PF13416 Bacterial extracellular solute-binding protein ACR55_RS16740 PF01266 FAD dependent oxidoreductase ACR55_RS16745 PF00175 Oxidoreductase NAD-binding domain ACR55_RS16745 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS16745 PF00970 Oxidoreductase FAD-binding domain ACR55_RS16750 PF02261 Aspartate decarboxylase ACR55_RS16755 PF00893 Small Multidrug Resistance protein ACR55_RS16760 PF03473 MOSC domain ACR55_RS16760 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS16760 PF03476 MOSC N-terminal beta barrel domain ACR55_RS16765 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ACR55_RS16770 PF06339 Ectoine synthase ACR55_RS16775 PF00202 Aminotransferase class-III ACR55_RS16780 PF00583 Acetyltransferase (GNAT) family ACR55_RS16785 PF12802 MarR family ACR55_RS16795 PF00202 Aminotransferase class-III ACR55_RS16800 PF16868 NMT1-like family ACR55_RS16810 PF04235 Protein of unknown function (DUF418) ACR55_RS16815 PF00521 DNA gyrase/topoisomerase IV, subunit A ACR55_RS16825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS16825 PF00204 DNA gyrase B ACR55_RS16825 PF01751 Toprim domain ACR55_RS16825 PF00986 DNA gyrase B subunit, carboxyl terminus ACR55_RS16830 PF00085 Thioredoxin ACR55_RS16835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACR55_RS16835 PF07497 Rho termination factor, RNA-binding domain ACR55_RS16835 PF07498 Rho termination factor, N-terminal domain ACR55_RS16845 PF08335 GlnD PII-uridylyltransferase ACR55_RS16845 PF03710 Glutamate-ammonia ligase adenylyltransferase ACR55_RS16850 PF02677 Epoxyqueuosine reductase QueH ACR55_RS16855 PF03315 Serine dehydratase beta chain ACR55_RS16855 PF03313 Serine dehydratase alpha chain ACR55_RS16860 PF02690 Na+/Pi-cotransporter ACR55_RS16865 PF13419 Haloacid dehalogenase-like hydrolase ACR55_RS16870 PF01738 Dienelactone hydrolase family ACR55_RS16875 PF02535 ZIP Zinc transporter ACR55_RS16880 PF00083 Sugar (and other) transporter ACR55_RS16880 PF07690 Major Facilitator Superfamily ACR55_RS16885 PF06481 COX Aromatic Rich Motif ACR55_RS16885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACR55_RS16890 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACR55_RS16895 PF00510 Cytochrome c oxidase subunit III ACR55_RS16900 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ACR55_RS16910 PF00476 DNA polymerase family A ACR55_RS16910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACR55_RS16910 PF01367 5'-3' exonuclease, C-terminal SAM fold ACR55_RS16910 PF01612 3'-5' exonuclease ACR55_RS16915 PF03641 Possible lysine decarboxylase ACR55_RS16930 PF02803 Thiolase, C-terminal domain ACR55_RS16930 PF00108 Thiolase, N-terminal domain ACR55_RS16935 PF01361 Tautomerase enzyme ACR55_RS16940 PF00005 ABC transporter ACR55_RS16940 PF00571 CBS domain ACR55_RS16945 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS16960 PF07690 Major Facilitator Superfamily ACR55_RS16965 PF00830 Ribosomal L28 family ACR55_RS16970 PF00471 Ribosomal protein L33 ACR55_RS16980 PF01740 STAS domain ACR55_RS16980 PF00916 Sulfate permease family ACR55_RS16990 PF12802 MarR family ACR55_RS16995 PF07690 Major Facilitator Superfamily ACR55_RS17000 PF00133 tRNA synthetases class I (I, L, M and V) ACR55_RS17000 PF09334 tRNA synthetases class I (M) ACR55_RS17000 PF13603 Leucyl-tRNA synthetase, Domain 2 ACR55_RS17000 PF08264 Anticodon-binding domain of tRNA ACR55_RS17015 PF00171 Aldehyde dehydrogenase family ACR55_RS17030 PF01425 Amidase ACR55_RS17045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS17045 PF00529 HlyD membrane-fusion protein of T1SS ACR55_RS17050 PF03412 Peptidase C39 family ACR55_RS17050 PF00005 ABC transporter ACR55_RS17050 PF00664 ABC transporter transmembrane region ACR55_RS17095 PF03466 LysR substrate binding domain ACR55_RS17095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17100 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ACR55_RS17100 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ACR55_RS17105 PF03466 LysR substrate binding domain ACR55_RS17105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17110 PF12795 Mechanosensitive ion channel porin domain ACR55_RS17110 PF00924 Mechanosensitive ion channel ACR55_RS17110 PF12794 Mechanosensitive ion channel inner membrane domain 1 ACR55_RS17115 PF12833 Helix-turn-helix domain ACR55_RS17115 PF01965 DJ-1/PfpI family ACR55_RS17120 PF00106 short chain dehydrogenase ACR55_RS17130 PF00892 EamA-like transporter family ACR55_RS17145 PF11490 DNA polymerase III polC-type N-terminus II ACR55_RS17145 PF14579 Helix-hairpin-helix motif ACR55_RS17145 PF02811 PHP domain ACR55_RS17145 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACR55_RS17145 PF00929 Exonuclease ACR55_RS17145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACR55_RS17150 PF11791 Aconitate B N-terminal domain ACR55_RS17150 PF06434 Aconitate hydratase 2 N-terminus ACR55_RS17150 PF00330 Aconitase family (aconitate hydratase) ACR55_RS17155 PF00593 TonB dependent receptor ACR55_RS17155 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS17165 PF00694 Aconitase C-terminal domain ACR55_RS17165 PF00330 Aconitase family (aconitate hydratase) ACR55_RS17170 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACR55_RS17185 PF01132 Elongation factor P (EF-P) OB domain ACR55_RS17185 PF08207 Elongation factor P (EF-P) KOW-like domain ACR55_RS17185 PF09285 Elongation factor P, C-terminal ACR55_RS17190 PF13609 Gram-negative porin ACR55_RS17205 PF00072 Response regulator receiver domain ACR55_RS17205 PF02954 Bacterial regulatory protein, Fis family ACR55_RS17205 PF00158 Sigma-54 interaction domain ACR55_RS17235 PF00437 Type II/IV secretion system protein ACR55_RS17245 PF04972 BON domain ACR55_RS17245 PF13629 Pilus formation protein N terminal region ACR55_RS17245 PF00263 Bacterial type II and III secretion system protein ACR55_RS17275 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS17275 PF00563 EAL domain ACR55_RS17275 PF03707 Bacterial signalling protein N terminal repeat ACR55_RS17275 PF13188 PAS domain ACR55_RS17290 PF01047 MarR family ACR55_RS17305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS17310 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17320 PF03466 LysR substrate binding domain ACR55_RS17335 PF00962 Adenosine/AMP deaminase ACR55_RS17340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17340 PF03466 LysR substrate binding domain ACR55_RS17345 PF03060 Nitronate monooxygenase ACR55_RS17350 PF13417 Glutathione S-transferase, N-terminal domain ACR55_RS17350 PF00043 Glutathione S-transferase, C-terminal domain ACR55_RS17360 PF05977 Transmembrane secretion effector ACR55_RS17365 PF00583 Acetyltransferase (GNAT) family ACR55_RS17375 PF00149 Calcineurin-like phosphoesterase ACR55_RS17380 PF11737 Protein of unknown function (DUF3300) ACR55_RS17395 PF13640 2OG-Fe(II) oxygenase superfamily ACR55_RS17395 PF18331 PKHD-type hydroxylase C-terminal domain ACR55_RS17405 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS17405 PF00593 TonB dependent receptor ACR55_RS17415 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACR55_RS17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17420 PF03466 LysR substrate binding domain ACR55_RS17430 PF01740 STAS domain ACR55_RS17430 PF00916 Sulfate permease family ACR55_RS17440 PF00583 Acetyltransferase (GNAT) family ACR55_RS17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17460 PF03466 LysR substrate binding domain ACR55_RS17465 PF07690 Major Facilitator Superfamily ACR55_RS17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17470 PF03466 LysR substrate binding domain ACR55_RS17475 PF00113 Enolase, C-terminal TIM barrel domain ACR55_RS17475 PF03952 Enolase, N-terminal domain ACR55_RS17485 PF00375 Sodium:dicarboxylate symporter family ACR55_RS17490 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS17495 PF03737 Aldolase/RraA ACR55_RS17500 PF04909 Amidohydrolase ACR55_RS17505 PF04303 PrpF protein ACR55_RS17510 PF03466 LysR substrate binding domain ACR55_RS17510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17515 PF04909 Amidohydrolase ACR55_RS17520 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS17525 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS17530 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS17530 PF07729 FCD domain ACR55_RS17535 PF02515 CoA-transferase family III ACR55_RS17540 PF04055 Radical SAM superfamily ACR55_RS17550 PF00596 Class II Aldolase and Adducin N-terminal domain ACR55_RS17555 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS17570 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS17580 PF00324 Amino acid permease ACR55_RS17590 PF03707 Bacterial signalling protein N terminal repeat ACR55_RS17590 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS17590 PF00563 EAL domain ACR55_RS17595 PF00005 ABC transporter ACR55_RS17595 PF00664 ABC transporter transmembrane region ACR55_RS17615 PF00672 HAMP domain ACR55_RS17615 PF02203 Tar ligand binding domain homologue ACR55_RS17615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACR55_RS17630 PF00691 OmpA family ACR55_RS17630 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACR55_RS17645 PF02659 Putative manganese efflux pump ACR55_RS17650 PF01613 Flavin reductase like domain ACR55_RS17660 PF02082 Transcriptional regulator ACR55_RS17670 PF01063 Amino-transferase class IV ACR55_RS17675 PF07690 Major Facilitator Superfamily ACR55_RS17685 PF00158 Sigma-54 interaction domain ACR55_RS17685 PF02954 Bacterial regulatory protein, Fis family ACR55_RS17685 PF01590 GAF domain ACR55_RS17690 PF00171 Aldehyde dehydrogenase family ACR55_RS17700 PF05666 Fels-1 Prophage Protein-like ACR55_RS17710 PF06719 AraC-type transcriptional regulator N-terminus ACR55_RS17710 PF12833 Helix-turn-helix domain ACR55_RS17715 PF00005 ABC transporter ACR55_RS17715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS17720 PF00005 ABC transporter ACR55_RS17720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS17725 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS17725 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS17730 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS17735 PF01266 FAD dependent oxidoreductase ACR55_RS17740 PF17806 Sarcosine oxidase A3 domain ACR55_RS17740 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS17750 PF01266 FAD dependent oxidoreductase ACR55_RS17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17755 PF03466 LysR substrate binding domain ACR55_RS17760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS17770 PF02798 Glutathione S-transferase, N-terminal domain ACR55_RS17780 PF12951 Passenger-associated-transport-repeat ACR55_RS17780 PF12951 Passenger-associated-transport-repeat ACR55_RS17790 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase ACR55_RS17795 PF05199 GMC oxidoreductase ACR55_RS17795 PF00732 GMC oxidoreductase ACR55_RS17800 PF00034 Cytochrome c ACR55_RS17800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACR55_RS17805 PF08281 Sigma-70, region 4 ACR55_RS17805 PF04542 Sigma-70 region 2 ACR55_RS17810 PF04773 FecR protein ACR55_RS17810 PF16220 Domain of unknown function (DUF4880) ACR55_RS17815 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS17815 PF00593 TonB dependent receptor ACR55_RS17820 PF04909 Amidohydrolase ACR55_RS17825 PF07690 Major Facilitator Superfamily ACR55_RS17830 PF00072 Response regulator receiver domain ACR55_RS17830 PF00196 Bacterial regulatory proteins, luxR family ACR55_RS17840 PF00296 Luciferase-like monooxygenase ACR55_RS17845 PF03466 LysR substrate binding domain ACR55_RS17845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17850 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS17855 PF01425 Amidase ACR55_RS17865 PF00005 ABC transporter ACR55_RS17870 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS17875 PF03466 LysR substrate binding domain ACR55_RS17880 PF02515 CoA-transferase family III ACR55_RS17885 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS17895 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS17900 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS17900 PF13977 BetI-type transcriptional repressor, C-terminal ACR55_RS17920 PF00005 ABC transporter ACR55_RS17925 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS17925 PF00005 ABC transporter ACR55_RS17940 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS17950 PF00501 AMP-binding enzyme ACR55_RS17950 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS17955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS17955 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS17955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS17960 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS17960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACR55_RS17970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACR55_RS17970 PF00364 Biotin-requiring enzyme ACR55_RS17970 PF02817 e3 binding domain ACR55_RS17975 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS17980 PF00364 Biotin-requiring enzyme ACR55_RS17980 PF02779 Transketolase, pyrimidine binding domain ACR55_RS17980 PF02780 Transketolase, C-terminal domain ACR55_RS17985 PF00676 Dehydrogenase E1 component ACR55_RS17990 PF01979 Amidohydrolase family ACR55_RS17995 PF00561 alpha/beta hydrolase fold ACR55_RS18000 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS18005 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS18005 PF07702 UTRA domain ACR55_RS18020 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS18025 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS18030 PF00005 ABC transporter ACR55_RS18035 PF00296 Luciferase-like monooxygenase ACR55_RS18040 PF03459 TOBE domain ACR55_RS18045 PF00005 ABC transporter ACR55_RS18050 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS18050 PF00005 ABC transporter ACR55_RS18055 PF11862 Domain of unknown function (DUF3382) ACR55_RS18055 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS18080 PF03466 LysR substrate binding domain ACR55_RS18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS18085 PF03466 LysR substrate binding domain ACR55_RS18090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACR55_RS18090 PF13378 Enolase C-terminal domain-like ACR55_RS18095 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS18110 PF07690 Major Facilitator Superfamily ACR55_RS18120 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS18125 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS18135 PF03466 LysR substrate binding domain ACR55_RS18140 PF03328 HpcH/HpaI aldolase/citrate lyase family ACR55_RS18145 PF02515 CoA-transferase family III ACR55_RS18150 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS18160 PF00672 HAMP domain ACR55_RS18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS18160 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS18165 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS18165 PF00072 Response regulator receiver domain ACR55_RS18170 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACR55_RS18180 PF00034 Cytochrome c ACR55_RS18185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACR55_RS18190 PF00403 Heavy-metal-associated domain ACR55_RS18195 PF01053 Cys/Met metabolism PLP-dependent enzyme ACR55_RS18205 PF02321 Outer membrane efflux protein ACR55_RS18210 PF00873 AcrB/AcrD/AcrF family ACR55_RS18215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS18220 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ACR55_RS18220 PF08479 POTRA domain, ShlB-type ACR55_RS18225 PF05860 haemagglutination activity domain ACR55_RS18230 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS18230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS18235 PF00072 Response regulator receiver domain ACR55_RS18235 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS18240 PF13458 Periplasmic binding protein ACR55_RS18245 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS18250 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS18250 PF11862 Domain of unknown function (DUF3382) ACR55_RS18255 PF00005 ABC transporter ACR55_RS18255 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS18260 PF00005 ABC transporter ACR55_RS18265 PF00582 Universal stress protein family ACR55_RS18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS18265 PF02702 Osmosensitive K+ channel His kinase sensor domain ACR55_RS18265 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS18265 PF13493 Domain of unknown function (DUF4118) ACR55_RS18270 PF02515 CoA-transferase family III ACR55_RS18275 PF03328 HpcH/HpaI aldolase/citrate lyase family ACR55_RS18280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS18280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS18280 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS18285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ACR55_RS18285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ACR55_RS18290 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS18315 PF03466 LysR substrate binding domain ACR55_RS18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS18320 PF00180 Isocitrate/isopropylmalate dehydrogenase ACR55_RS18365 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS18365 PF00501 AMP-binding enzyme ACR55_RS18380 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS18380 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ACR55_RS18385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ACR55_RS18390 PF00294 pfkB family carbohydrate kinase ACR55_RS18395 PF01081 KDPG and KHG aldolase ACR55_RS18405 PF17755 UvrA DNA-binding domain ACR55_RS18405 PF17760 UvrA interaction domain ACR55_RS18405 PF00005 ABC transporter ACR55_RS18410 PF00425 chorismate binding enzyme ACR55_RS18410 PF04715 Anthranilate synthase component I, N terminal region ACR55_RS18430 PF02272 DHHA1 domain ACR55_RS18430 PF01411 tRNA synthetases class II (A) ACR55_RS18430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACR55_RS18440 PF00899 ThiF family ACR55_RS18445 PF02321 Outer membrane efflux protein ACR55_RS18450 PF00005 ABC transporter ACR55_RS18450 PF02687 FtsX-like permease family ACR55_RS18450 PF12704 MacB-like periplasmic core domain ACR55_RS18455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS18470 PF01243 Pyridoxamine 5'-phosphate oxidase ACR55_RS18470 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACR55_RS18475 PF01613 Flavin reductase like domain ACR55_RS18480 PF01266 FAD dependent oxidoreductase ACR55_RS18485 PF00551 Formyl transferase ACR55_RS18490 PF13018 Extended Signal Peptide of Type V secretion system ACR55_RS18490 PF13332 Hemagglutinin repeat ACR55_RS18490 PF05860 haemagglutination activity domain ACR55_RS18490 PF04829 Pre-toxin domain with VENN motif ACR55_RS18505 PF03466 LysR substrate binding domain ACR55_RS18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS18510 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS18520 PF10415 Fumarase C C-terminus ACR55_RS18520 PF00206 Lyase ACR55_RS18530 PF11741 AMIN domain ACR55_RS18530 PF01520 N-acetylmuramoyl-L-alanine amidase ACR55_RS18535 PF13018 Extended Signal Peptide of Type V secretion system ACR55_RS18535 PF05594 Haemagluttinin repeat ACR55_RS18535 PF13018 Extended Signal Peptide of Type V secretion system ACR55_RS18535 PF05594 Haemagluttinin repeat ACR55_RS18535 PF13332 Hemagglutinin repeat ACR55_RS18535 PF05860 haemagglutination activity domain ACR55_RS18535 PF05860 haemagglutination activity domain ACR55_RS18535 PF13332 Hemagglutinin repeat ACR55_RS18540 PF09335 SNARE associated Golgi protein ACR55_RS18545 PF08676 MutL C terminal dimerisation domain ACR55_RS18545 PF01119 DNA mismatch repair protein, C-terminal domain ACR55_RS18555 PF00586 AIR synthase related protein, N-terminal domain ACR55_RS18555 PF02769 AIR synthase related protein, C-terminal domain ACR55_RS18560 PF00308 Bacterial dnaA protein ACR55_RS18570 PF12626 Polymerase A arginine-rich C-terminus ACR55_RS18570 PF01743 Poly A polymerase head domain ACR55_RS18570 PF12627 Probable RNA and SrmB- binding site of polymerase A ACR55_RS18575 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACR55_RS18590 PF03328 HpcH/HpaI aldolase/citrate lyase family ACR55_RS18595 PF02515 CoA-transferase family III ACR55_RS18610 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS18615 PF02091 Glycyl-tRNA synthetase alpha subunit ACR55_RS18620 PF05746 DALR anticodon binding domain ACR55_RS18620 PF02092 Glycyl-tRNA synthetase beta subunit ACR55_RS18630 PF01553 Acyltransferase ACR55_RS18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS18640 PF03466 LysR substrate binding domain ACR55_RS18645 PF04205 FMN-binding domain ACR55_RS18645 PF00890 FAD binding domain ACR55_RS18655 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS18660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACR55_RS18665 PF01327 Polypeptide deformylase ACR55_RS18670 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS18670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS18670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS18670 PF09317 Domain of unknown function (DUF1974) ACR55_RS18675 PF07670 Nucleoside recognition ACR55_RS18680 PF02887 Pyruvate kinase, alpha/beta domain ACR55_RS18680 PF00224 Pyruvate kinase, barrel domain ACR55_RS18685 PF02595 Glycerate kinase family ACR55_RS18695 PF00398 Ribosomal RNA adenine dimethylase ACR55_RS18700 PF09312 SurA N-terminal domain ACR55_RS18700 PF00639 PPIC-type PPIASE domain ACR55_RS18705 PF04453 LPS transport system D ACR55_RS18710 PF01636 Phosphotransferase enzyme family ACR55_RS18715 PF00483 Nucleotidyl transferase ACR55_RS18725 PF01329 Pterin 4 alpha carbinolamine dehydratase ACR55_RS18740 PF00248 Aldo/keto reductase family ACR55_RS18750 PF08502 LeuA allosteric (dimerisation) domain ACR55_RS18750 PF00682 HMGL-like ACR55_RS18755 PF13649 Methyltransferase domain ACR55_RS18760 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS18760 PF00970 Oxidoreductase FAD-binding domain ACR55_RS18765 PF00149 Calcineurin-like phosphoesterase ACR55_RS18765 PF02872 5'-nucleotidase, C-terminal domain ACR55_RS18770 PF03466 LysR substrate binding domain ACR55_RS18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS18775 PF08943 CsiD ACR55_RS18780 PF00795 Carbon-nitrogen hydrolase ACR55_RS18785 PF00005 ABC transporter ACR55_RS18790 PF00005 ABC transporter ACR55_RS18790 PF12857 TOBE-like domain ACR55_RS18800 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS18845 PF13477 Glycosyl transferase 4-like ACR55_RS18845 PF00534 Glycosyl transferases group 1 ACR55_RS18860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACR55_RS18860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACR55_RS18860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACR55_RS18865 PF02350 UDP-N-acetylglucosamine 2-epimerase ACR55_RS18875 PF00005 ABC transporter ACR55_RS18880 PF01061 ABC-2 type transporter ACR55_RS18885 PF02563 Polysaccharide biosynthesis/export protein ACR55_RS18895 PF05170 AsmA family ACR55_RS18900 PF03352 Methyladenine glycosylase ACR55_RS18905 PF03692 Putative zinc- or iron-chelating domain ACR55_RS18925 PF05962 HutD ACR55_RS18930 PF01979 Amidohydrolase family ACR55_RS18935 PF14765 Polyketide synthase dehydratase ACR55_RS18935 PF00698 Acyl transferase domain ACR55_RS18935 PF00109 Beta-ketoacyl synthase, N-terminal domain ACR55_RS18935 PF02801 Beta-ketoacyl synthase, C-terminal domain ACR55_RS18935 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS18935 PF08659 KR domain ACR55_RS18935 PF16197 Ketoacyl-synthetase C-terminal extension ACR55_RS18935 PF00550 Phosphopantetheine attachment site ACR55_RS18940 PF00155 Aminotransferase class I and II ACR55_RS18945 PF00793 DAHP synthetase I family ACR55_RS18950 PF05159 Capsule polysaccharide biosynthesis protein ACR55_RS18955 PF05159 Capsule polysaccharide biosynthesis protein ACR55_RS18965 PF00106 short chain dehydrogenase ACR55_RS18975 PF03180 NLPA lipoprotein ACR55_RS18980 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS18985 PF09383 NIL domain ACR55_RS18985 PF00005 ABC transporter ACR55_RS18990 PF13802 Galactose mutarotase-like ACR55_RS18990 PF01055 Glycosyl hydrolases family 31 ACR55_RS18995 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ACR55_RS18995 PF01266 FAD dependent oxidoreductase ACR55_RS19000 PF00459 Inositol monophosphatase family ACR55_RS19005 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS19005 PF00501 AMP-binding enzyme ACR55_RS19010 PF07687 Peptidase dimerisation domain ACR55_RS19010 PF01546 Peptidase family M20/M25/M40 ACR55_RS19015 PF03466 LysR substrate binding domain ACR55_RS19015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS19020 PF03601 Conserved hypothetical protein 698 ACR55_RS19025 PF03061 Thioesterase superfamily ACR55_RS19030 PF03448 MgtE intracellular N domain ACR55_RS19030 PF01769 Divalent cation transporter ACR55_RS19030 PF00571 CBS domain ACR55_RS19035 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ACR55_RS19045 PF01037 Lrp/AsnC ligand binding domain ACR55_RS19055 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS19070 PF07516 SecA Wing and Scaffold domain ACR55_RS19070 PF02810 SEC-C motif ACR55_RS19070 PF07517 SecA DEAD-like domain ACR55_RS19070 PF01043 SecA preprotein cross-linking domain ACR55_RS19075 PF08525 Opacity-associated protein A N-terminal motif ACR55_RS19075 PF01476 LysM domain ACR55_RS19075 PF01551 Peptidase family M23 ACR55_RS19090 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ACR55_RS19095 PF00091 Tubulin/FtsZ family, GTPase domain ACR55_RS19095 PF12327 FtsZ family, C-terminal domain ACR55_RS19100 PF02491 SHS2 domain inserted in FTSA ACR55_RS19105 PF08478 POTRA domain, FtsQ-type ACR55_RS19105 PF03799 Cell division protein FtsQ ACR55_RS19110 PF01820 D-ala D-ala ligase N-terminus ACR55_RS19110 PF07478 D-ala D-ala ligase C-terminus ACR55_RS19115 PF08245 Mur ligase middle domain ACR55_RS19115 PF01225 Mur ligase family, catalytic domain ACR55_RS19115 PF02875 Mur ligase family, glutamate ligase domain ACR55_RS19120 PF03033 Glycosyltransferase family 28 N-terminal domain ACR55_RS19120 PF04101 Glycosyltransferase family 28 C-terminal domain ACR55_RS19125 PF01098 Cell cycle protein ACR55_RS19130 PF08245 Mur ligase middle domain ACR55_RS19130 PF02875 Mur ligase family, glutamate ligase domain ACR55_RS19135 PF00953 Glycosyl transferase family 4 ACR55_RS19140 PF08245 Mur ligase middle domain ACR55_RS19140 PF02875 Mur ligase family, glutamate ligase domain ACR55_RS19145 PF03717 Penicillin-binding Protein dimerisation domain ACR55_RS19145 PF00905 Penicillin binding protein transpeptidase domain ACR55_RS19150 PF04999 Cell division protein FtsL ACR55_RS19155 PF01795 MraW methylase family ACR55_RS19160 PF02381 MraZ protein, putative antitoxin-like ACR55_RS19165 PF16326 ABC transporter C-terminal domain ACR55_RS19165 PF12848 ABC transporter ACR55_RS19165 PF00005 ABC transporter ACR55_RS19170 PF01979 Amidohydrolase family ACR55_RS19175 PF01546 Peptidase family M20/M25/M40 ACR55_RS19175 PF07687 Peptidase dimerisation domain ACR55_RS19215 PF01037 Lrp/AsnC ligand binding domain ACR55_RS19220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACR55_RS19225 PF01625 Peptide methionine sulfoxide reductase ACR55_RS19230 PF00034 Cytochrome c ACR55_RS19235 PF01790 Prolipoprotein diacylglyceryl transferase ACR55_RS19260 PF01970 Tripartite tricarboxylate transporter TctA family ACR55_RS19265 PF08359 YsiA-like protein, C-terminal region ACR55_RS19265 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS19275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACR55_RS19275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACR55_RS19280 PF02525 Flavodoxin-like fold ACR55_RS19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS19285 PF03466 LysR substrate binding domain ACR55_RS19290 PF02515 CoA-transferase family III ACR55_RS19295 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS19300 PF09339 IclR helix-turn-helix domain ACR55_RS19300 PF01614 Bacterial transcriptional regulator ACR55_RS19305 PF01970 Tripartite tricarboxylate transporter TctA family ACR55_RS19315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS19315 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS19320 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS19320 PF00072 Response regulator receiver domain ACR55_RS19325 PF00293 NUDIX domain ACR55_RS19330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACR55_RS19330 PF03129 Anticodon binding domain ACR55_RS19330 PF04073 Aminoacyl-tRNA editing domain ACR55_RS19335 PF03061 Thioesterase superfamily ACR55_RS19340 PF01618 MotA/TolQ/ExbB proton channel family ACR55_RS19345 PF02472 Biopolymer transport protein ExbD/TolR ACR55_RS19355 PF07676 WD40-like Beta Propeller Repeat ACR55_RS19355 PF04052 TolB amino-terminal domain ACR55_RS19360 PF00691 OmpA family ACR55_RS19375 PF12697 Alpha/beta hydrolase family ACR55_RS19380 PF01037 Lrp/AsnC ligand binding domain ACR55_RS19390 PF00679 Elongation factor G C-terminus ACR55_RS19390 PF03144 Elongation factor Tu domain 2 ACR55_RS19390 PF00009 Elongation factor Tu GTP binding domain ACR55_RS19390 PF14492 Elongation Factor G, domain II ACR55_RS19390 PF03764 Elongation factor G, domain IV ACR55_RS19395 PF00582 Universal stress protein family ACR55_RS19405 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS19405 PF00155 Aminotransferase class I and II ACR55_RS19410 PF00892 EamA-like transporter family ACR55_RS19415 PF01810 LysE type translocator ACR55_RS19420 PF12146 Serine aminopeptidase, S33 ACR55_RS19430 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ACR55_RS19435 PF00535 Glycosyl transferase family 2 ACR55_RS19450 PF02321 Outer membrane efflux protein ACR55_RS19460 PF00005 ABC transporter ACR55_RS19465 PF13533 Biotin-lipoyl like ACR55_RS19475 PF00929 Exonuclease ACR55_RS19480 PF00873 AcrB/AcrD/AcrF family ACR55_RS19485 PF13533 Biotin-lipoyl like ACR55_RS19490 PF00075 RNase H ACR55_RS19495 PF08241 Methyltransferase domain ACR55_RS19500 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACR55_RS19500 PF00753 Metallo-beta-lactamase superfamily ACR55_RS19505 PF01464 Transglycosylase SLT domain ACR55_RS19505 PF01476 LysM domain ACR55_RS19515 PF04391 Protein of unknown function (DUF533) ACR55_RS19520 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS19525 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACR55_RS19525 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACR55_RS19550 PF01011 PQQ enzyme repeat ACR55_RS19555 PF01810 LysE type translocator ACR55_RS19560 PF09297 NADH pyrophosphatase zinc ribbon domain ACR55_RS19560 PF00293 NUDIX domain ACR55_RS19575 PF00582 Universal stress protein family ACR55_RS19580 PF13806 Rieske-like [2Fe-2S] domain ACR55_RS19580 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS19580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACR55_RS19580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACR55_RS19580 PF04324 BFD-like [2Fe-2S] binding domain ACR55_RS19580 PF18267 Rubredoxin NAD+ reductase C-terminal domain ACR55_RS19590 PF01226 Formate/nitrite transporter ACR55_RS19595 PF00069 Protein kinase domain ACR55_RS19600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACR55_RS19605 PF08376 Nitrate and nitrite sensing ACR55_RS19605 PF03861 ANTAR domain ACR55_RS19615 PF14698 Argininosuccinate lyase C-terminal ACR55_RS19615 PF00206 Lyase ACR55_RS19630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ACR55_RS19630 PF10996 Beta-Casp domain ACR55_RS19630 PF00753 Metallo-beta-lactamase superfamily ACR55_RS19635 PF00591 Glycosyl transferase family, a/b domain ACR55_RS19635 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ACR55_RS19635 PF02885 Glycosyl transferase family, helical bundle domain ACR55_RS19640 PF01042 Endoribonuclease L-PSP ACR55_RS19645 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS19650 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS19655 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS19655 PF07729 FCD domain ACR55_RS19660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS19660 PF03466 LysR substrate binding domain ACR55_RS19670 PF08946 Osmosensory transporter coiled coil ACR55_RS19670 PF00083 Sugar (and other) transporter ACR55_RS19680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS19680 PF03466 LysR substrate binding domain ACR55_RS19685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACR55_RS19685 PF13378 Enolase C-terminal domain-like ACR55_RS19690 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS19695 PF07690 Major Facilitator Superfamily ACR55_RS19705 PF04293 SpoVR like protein ACR55_RS19710 PF04285 Protein of unknown function (DUF444) ACR55_RS19715 PF06798 PrkA serine protein kinase C-terminal domain ACR55_RS19715 PF08298 PrkA AAA domain ACR55_RS19720 PF00677 Lumazine binding domain ACR55_RS19725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACR55_RS19725 PF01872 RibD C-terminal domain ACR55_RS19730 PF00857 Isochorismatase family ACR55_RS19735 PF01965 DJ-1/PfpI family ACR55_RS19740 PF03477 ATP cone domain ACR55_RS19745 PF00464 Serine hydroxymethyltransferase ACR55_RS19755 PF00579 tRNA synthetases class I (W and Y) ACR55_RS19755 PF01479 S4 domain ACR55_RS19760 PF01476 LysM domain ACR55_RS19760 PF01551 Peptidase family M23 ACR55_RS19765 PF03702 Anhydro-N-acetylmuramic acid kinase ACR55_RS19770 PF01521 Iron-sulphur cluster biosynthesis ACR55_RS19780 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACR55_RS19780 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACR55_RS19785 PF00380 Ribosomal protein S9/S16 ACR55_RS19790 PF00572 Ribosomal protein L13 ACR55_RS19795 PF03480 Bacterial extracellular solute-binding protein, family 7 ACR55_RS19805 PF01523 Putative modulator of DNA gyrase ACR55_RS19810 PF04751 Protein of unknown function (DUF615) ACR55_RS19815 PF02230 Phospholipase/Carboxylesterase ACR55_RS19820 PF00037 4Fe-4S binding domain ACR55_RS19820 PF00175 Oxidoreductase NAD-binding domain ACR55_RS19820 PF00970 Oxidoreductase FAD-binding domain ACR55_RS19830 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS19835 PF01202 Shikimate kinase ACR55_RS19845 PF00171 Aldehyde dehydrogenase family ACR55_RS19850 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS19850 PF00501 AMP-binding enzyme ACR55_RS19865 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS19870 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS19870 PF11862 Domain of unknown function (DUF3382) ACR55_RS19875 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS19875 PF00005 ABC transporter ACR55_RS19880 PF00005 ABC transporter ACR55_RS19885 PF00583 Acetyltransferase (GNAT) family ACR55_RS19885 PF00583 Acetyltransferase (GNAT) family ACR55_RS19885 PF13607 Succinyl-CoA ligase like flavodoxin domain ACR55_RS19885 PF13380 CoA binding domain ACR55_RS19885 PF13380 CoA binding domain ACR55_RS19885 PF13607 Succinyl-CoA ligase like flavodoxin domain ACR55_RS19890 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACR55_RS19895 PF07690 Major Facilitator Superfamily ACR55_RS19905 PF01037 Lrp/AsnC ligand binding domain ACR55_RS19915 PF00317 Ribonucleotide reductase, all-alpha domain ACR55_RS19915 PF02867 Ribonucleotide reductase, barrel domain ACR55_RS19915 PF03477 ATP cone domain ACR55_RS19920 PF00268 Ribonucleotide reductase, small chain ACR55_RS19935 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS19935 PF00501 AMP-binding enzyme ACR55_RS19940 PF03062 MBOAT, membrane-bound O-acyltransferase family ACR55_RS19960 PF00294 pfkB family carbohydrate kinase ACR55_RS19975 PF02785 Biotin carboxylase C-terminal domain ACR55_RS19975 PF00289 Biotin carboxylase, N-terminal domain ACR55_RS19975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACR55_RS19980 PF00364 Biotin-requiring enzyme ACR55_RS19985 PF01220 Dehydroquinase class II ACR55_RS19990 PF00578 AhpC/TSA family ACR55_RS19995 PF02875 Mur ligase family, glutamate ligase domain ACR55_RS19995 PF01225 Mur ligase family, catalytic domain ACR55_RS19995 PF08245 Mur ligase middle domain ACR55_RS20000 PF05728 Uncharacterised protein family (UPF0227) ACR55_RS20005 PF00773 RNB domain ACR55_RS20015 PF08501 Shikimate dehydrogenase substrate binding domain ACR55_RS20015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ACR55_RS20015 PF01488 Shikimate / quinate 5-dehydrogenase ACR55_RS20020 PF00912 Transglycosylase ACR55_RS20030 PF00149 Calcineurin-like phosphoesterase ACR55_RS20035 PF01553 Acyltransferase ACR55_RS20040 PF01979 Amidohydrolase family ACR55_RS20045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACR55_RS20045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACR55_RS20050 PF03652 Holliday junction resolvase ACR55_RS20055 PF02622 Uncharacterized ACR, COG1678 ACR55_RS20060 PF00301 Rubredoxin ACR55_RS20065 PF08543 Phosphomethylpyrimidine kinase ACR55_RS20070 PF02581 Thiamine monophosphate synthase ACR55_RS20075 PF00202 Aminotransferase class-III ACR55_RS20095 PF13193 AMP-binding enzyme C-terminal domain ACR55_RS20095 PF00501 AMP-binding enzyme ACR55_RS20100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS20100 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS20100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS20105 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS20115 PF01494 FAD binding domain ACR55_RS20120 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS20125 PF09345 Domain of unknown function (DUF1987) ACR55_RS20140 PF00005 ABC transporter ACR55_RS20145 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS20145 PF00005 ABC transporter ACR55_RS20150 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS20150 PF11862 Domain of unknown function (DUF3382) ACR55_RS20155 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS20180 PF01960 ArgJ family ACR55_RS20190 PF09297 NADH pyrophosphatase zinc ribbon domain ACR55_RS20190 PF00293 NUDIX domain ACR55_RS20195 PF16970 Type-1 fimbrial protein, A ACR55_RS20200 PF02321 Outer membrane efflux protein ACR55_RS20205 PF00873 AcrB/AcrD/AcrF family ACR55_RS20210 PF00873 AcrB/AcrD/AcrF family ACR55_RS20215 PF13533 Biotin-lipoyl like ACR55_RS20220 PF07072 Cell division protein ACR55_RS20225 PF01121 Dephospho-CoA kinase ACR55_RS20230 PF01478 Type IV leader peptidase family ACR55_RS20230 PF06750 Bacterial Peptidase A24 N-terminal domain ACR55_RS20240 PF02569 Pantoate-beta-alanine ligase ACR55_RS20245 PF02616 Segregation and condensation protein ScpA ACR55_RS20255 PF07690 Major Facilitator Superfamily ACR55_RS20260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACR55_RS20260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACR55_RS20270 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS20275 PF00005 ABC transporter ACR55_RS20280 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS20285 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS20290 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACR55_RS20295 PF00005 ABC transporter ACR55_RS20300 PF18075 FtsX extracellular domain ACR55_RS20305 PF03975 CheD chemotactic sensory transduction ACR55_RS20315 PF10576 Iron-sulfur binding domain of endonuclease III ACR55_RS20315 PF00633 Helix-hairpin-helix motif ACR55_RS20315 PF00730 HhH-GPD superfamily base excision DNA repair protein ACR55_RS20315 PF14815 NUDIX domain ACR55_RS20320 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS20325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACR55_RS20330 PF00873 AcrB/AcrD/AcrF family ACR55_RS20335 PF02321 Outer membrane efflux protein ACR55_RS20345 PF08241 Methyltransferase domain ACR55_RS20350 PF02607 B12 binding domain ACR55_RS20350 PF02965 Vitamin B12 dependent methionine synthase, activation domain ACR55_RS20350 PF02310 B12 binding domain ACR55_RS20350 PF02574 Homocysteine S-methyltransferase ACR55_RS20350 PF00809 Pterin binding enzyme ACR55_RS20355 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS20355 PF00593 TonB dependent receptor ACR55_RS20360 PF01497 Periplasmic binding protein ACR55_RS20365 PF05690 Thiazole biosynthesis protein ThiG ACR55_RS20370 PF08543 Phosphomethylpyrimidine kinase ACR55_RS20380 PF02321 Outer membrane efflux protein ACR55_RS20385 PF01467 Cytidylyltransferase-like ACR55_RS20395 PF03109 ABC1 family ACR55_RS20405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACR55_RS20410 PF02397 Bacterial sugar transferase ACR55_RS20445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACR55_RS20445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACR55_RS20455 PF00005 ABC transporter ACR55_RS20460 PF01061 ABC-2 type transporter ACR55_RS20470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACR55_RS20470 PF00355 Rieske [2Fe-2S] domain ACR55_RS20485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACR55_RS20485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACR55_RS20500 PF01209 ubiE/COQ5 methyltransferase family ACR55_RS20505 PF00072 Response regulator receiver domain ACR55_RS20505 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS20510 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS20510 PF00989 PAS fold ACR55_RS20510 PF11808 Phosphate regulon sensor protein PhoR ACR55_RS20515 PF00072 Response regulator receiver domain ACR55_RS20515 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS20520 PF00672 HAMP domain ACR55_RS20520 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS20520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS20530 PF07731 Multicopper oxidase ACR55_RS20530 PF07732 Multicopper oxidase ACR55_RS20530 PF00394 Multicopper oxidase ACR55_RS20535 PF05275 Copper resistance protein B precursor (CopB) ACR55_RS20545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS20545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS20545 PF01842 ACT domain ACR55_RS20550 PF03466 LysR substrate binding domain ACR55_RS20550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS20560 PF02682 Carboxyltransferase domain, subdomain C and D ACR55_RS20565 PF02626 Carboxyltransferase domain, subdomain A and B ACR55_RS20570 PF03746 LamB/YcsF family ACR55_RS20575 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS20575 PF07729 FCD domain ACR55_RS20585 PF09335 SNARE associated Golgi protein ACR55_RS20590 PF00291 Pyridoxal-phosphate dependent enzyme ACR55_RS20590 PF00585 C-terminal regulatory domain of Threonine dehydratase ACR55_RS20595 PF13609 Gram-negative porin ACR55_RS20605 PF03466 LysR substrate binding domain ACR55_RS20605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS20610 PF00156 Phosphoribosyl transferase domain ACR55_RS20615 PF00664 ABC transporter transmembrane region ACR55_RS20615 PF00005 ABC transporter ACR55_RS20620 PF00005 ABC transporter ACR55_RS20620 PF00664 ABC transporter transmembrane region ACR55_RS20625 PF08173 Membrane bound YbgT-like protein ACR55_RS20630 PF02322 Cytochrome bd terminal oxidase subunit II ACR55_RS20635 PF01654 Cytochrome bd terminal oxidase subunit I ACR55_RS20645 PF02222 ATP-grasp domain ACR55_RS20650 PF00571 CBS domain ACR55_RS20650 PF01380 SIS domain ACR55_RS20670 PF00005 ABC transporter ACR55_RS20675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ACR55_RS20680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACR55_RS20685 PF07475 HPr Serine kinase C-terminal domain ACR55_RS20685 PF02603 HPr Serine kinase N terminus ACR55_RS20690 PF00034 Cytochrome c ACR55_RS20690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACR55_RS20700 PF03668 P-loop ATPase protein family ACR55_RS20705 PF03330 Lytic transglycolase ACR55_RS20705 PF05036 Sporulation related domain ACR55_RS20710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACR55_RS20710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACR55_RS20715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACR55_RS20720 PF02021 Uncharacterised protein family UPF0102 ACR55_RS20725 PF13580 SIS domain ACR55_RS20730 PF04972 BON domain ACR55_RS20735 PF00578 AhpC/TSA family ACR55_RS20740 PF03180 NLPA lipoprotein ACR55_RS20745 PF00696 Amino acid kinase family ACR55_RS20755 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS20760 PF00939 Sodium:sulfate symporter transmembrane region ACR55_RS20765 PF02615 Malate/L-lactate dehydrogenase ACR55_RS20770 PF01098 Cell cycle protein ACR55_RS20775 PF03717 Penicillin-binding Protein dimerisation domain ACR55_RS20775 PF00905 Penicillin binding protein transpeptidase domain ACR55_RS20785 PF04085 rod shape-determining protein MreC ACR55_RS20795 PF02686 Glu-tRNAGln amidotransferase C subunit ACR55_RS20800 PF01425 Amidase ACR55_RS20805 PF02934 GatB/GatE catalytic domain ACR55_RS20805 PF02637 GatB domain ACR55_RS20810 PF00156 Phosphoribosyl transferase domain ACR55_RS20815 PF03372 Endonuclease/Exonuclease/phosphatase family ACR55_RS20820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACR55_RS20820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACR55_RS20825 PF03458 UPF0126 domain ACR55_RS20835 PF13609 Gram-negative porin ACR55_RS20840 PF07690 Major Facilitator Superfamily ACR55_RS20845 PF00561 alpha/beta hydrolase fold ACR55_RS20845 PF07021 Methionine biosynthesis protein MetW ACR55_RS20850 PF00561 alpha/beta hydrolase fold ACR55_RS20855 PF02615 Malate/L-lactate dehydrogenase ACR55_RS20870 PF00561 alpha/beta hydrolase fold ACR55_RS20875 PF04262 Glutamate-cysteine ligase ACR55_RS20900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACR55_RS20905 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ACR55_RS20905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACR55_RS20905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACR55_RS20910 PF02515 CoA-transferase family III ACR55_RS20915 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS20915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS20915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS20920 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS20925 PF03060 Nitronate monooxygenase ACR55_RS20930 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS20935 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS20940 PF01256 Carbohydrate kinase ACR55_RS20950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS20955 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ACR55_RS20960 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS20965 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS20965 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS20970 PF00005 ABC transporter ACR55_RS20970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS20975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS20975 PF00005 ABC transporter ACR55_RS20985 PF07687 Peptidase dimerisation domain ACR55_RS20985 PF01546 Peptidase family M20/M25/M40 ACR55_RS20990 PF00580 UvrD/REP helicase N-terminal domain ACR55_RS20990 PF13361 UvrD-like helicase C-terminal domain ACR55_RS20995 PF17764 3′ DNA-binding domain (3′BD) ACR55_RS20995 PF00271 Helicase conserved C-terminal domain ACR55_RS20995 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ACR55_RS20995 PF18074 Primosomal protein N C-terminal domain ACR55_RS20995 PF00270 DEAD/DEAH box helicase ACR55_RS21000 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACR55_RS21010 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACR55_RS21015 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACR55_RS21015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACR55_RS21020 PF00231 ATP synthase ACR55_RS21025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACR55_RS21025 PF00306 ATP synthase alpha/beta chain, C terminal domain ACR55_RS21025 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACR55_RS21030 PF00213 ATP synthase delta (OSCP) subunit ACR55_RS21035 PF00430 ATP synthase B/B' CF(0) ACR55_RS21040 PF00137 ATP synthase subunit C ACR55_RS21045 PF00119 ATP synthase A chain ACR55_RS21060 PF00378 Enoyl-CoA hydratase/isomerase ACR55_RS21070 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS21080 PF01171 PP-loop family ACR55_RS21085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACR55_RS21085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACR55_RS21085 PF01842 ACT domain ACR55_RS21090 PF13098 Thioredoxin-like domain ACR55_RS21090 PF10411 Disulfide bond isomerase protein N-terminus ACR55_RS21095 PF01494 FAD binding domain ACR55_RS21100 PF06725 3D domain ACR55_RS21100 PF03562 MltA specific insert domain ACR55_RS21105 PF04379 ApaG domain ACR55_RS21110 PF00834 Ribulose-phosphate 3 epimerase family ACR55_RS21115 PF13419 Haloacid dehalogenase-like hydrolase ACR55_RS21120 PF04715 Anthranilate synthase component I, N terminal region ACR55_RS21120 PF00425 chorismate binding enzyme ACR55_RS21125 PF00117 Glutamine amidotransferase class-I ACR55_RS21130 PF02885 Glycosyl transferase family, helical bundle domain ACR55_RS21130 PF00591 Glycosyl transferase family, a/b domain ACR55_RS21135 PF00218 Indole-3-glycerol phosphate synthase ACR55_RS21140 PF00107 Zinc-binding dehydrogenase ACR55_RS21140 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS21150 PF01323 DSBA-like thioredoxin domain ACR55_RS21155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS21155 PF03466 LysR substrate binding domain ACR55_RS21160 PF00753 Metallo-beta-lactamase superfamily ACR55_RS21165 PF02769 AIR synthase related protein, C-terminal domain ACR55_RS21165 PF00586 AIR synthase related protein, N-terminal domain ACR55_RS21175 PF00009 Elongation factor Tu GTP binding domain ACR55_RS21175 PF09106 Elongation factor SelB, winged helix ACR55_RS21175 PF03144 Elongation factor Tu domain 2 ACR55_RS21175 PF09107 Elongation factor SelB, winged helix ACR55_RS21180 PF12390 Selenocysteine synthase N terminal ACR55_RS21180 PF03841 L-seryl-tRNA selenium transferase ACR55_RS21185 PF04216 Protein involved in formate dehydrogenase formation ACR55_RS21190 PF01292 Prokaryotic cytochrome b561 ACR55_RS21195 PF13247 4Fe-4S dicluster domain ACR55_RS21195 PF09163 Formate dehydrogenase N, transmembrane ACR55_RS21200 PF00384 Molybdopterin oxidoreductase ACR55_RS21200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACR55_RS21200 PF01568 Molydopterin dinucleotide binding domain ACR55_RS21205 PF01568 Molydopterin dinucleotide binding domain ACR55_RS21205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACR55_RS21205 PF00384 Molybdopterin oxidoreductase ACR55_RS21215 PF03061 Thioesterase superfamily ACR55_RS21240 PF16859 Tetracyclin repressor-like, C-terminal domain ACR55_RS21240 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS21245 PF04542 Sigma-70 region 2 ACR55_RS21245 PF08281 Sigma-70, region 4 ACR55_RS21250 PF16220 Domain of unknown function (DUF4880) ACR55_RS21250 PF04773 FecR protein ACR55_RS21255 PF04886 PT repeat ACR55_RS21255 PF00593 TonB dependent receptor ACR55_RS21255 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS21260 PF05171 Haemin-degrading HemS.ChuX domain ACR55_RS21265 PF01497 Periplasmic binding protein ACR55_RS21270 PF01032 FecCD transport family ACR55_RS21275 PF00005 ABC transporter ACR55_RS21290 PF01494 FAD binding domain ACR55_RS21295 PF04463 Protein of unknown function (DUF523) ACR55_RS21305 PF00857 Isochorismatase family ACR55_RS21310 PF00156 Phosphoribosyl transferase domain ACR55_RS21315 PF01546 Peptidase family M20/M25/M40 ACR55_RS21315 PF07687 Peptidase dimerisation domain ACR55_RS21320 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS21325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS21325 PF03466 LysR substrate binding domain ACR55_RS21330 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA ACR55_RS21335 PF13532 2OG-Fe(II) oxygenase superfamily ACR55_RS21340 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACR55_RS21340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACR55_RS21340 PF02805 Metal binding domain of Ada ACR55_RS21340 PF12833 Helix-turn-helix domain ACR55_RS21350 PF00990 Diguanylate cyclase, GGDEF domain ACR55_RS21350 PF00563 EAL domain ACR55_RS21350 PF03707 Bacterial signalling protein N terminal repeat ACR55_RS21365 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS21370 PF02954 Bacterial regulatory protein, Fis family ACR55_RS21370 PF00072 Response regulator receiver domain ACR55_RS21370 PF00158 Sigma-54 interaction domain ACR55_RS21375 PF00012 Hsp70 protein ACR55_RS21380 PF02548 Ketopantoate hydroxymethyltransferase ACR55_RS21385 PF05643 Putative bacterial lipoprotein (DUF799) ACR55_RS21395 PF03783 Curli production assembly/transport component CsgG ACR55_RS21405 PF13609 Gram-negative porin ACR55_RS21410 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ACR55_RS21420 PF01717 Cobalamin-independent synthase, Catalytic domain ACR55_RS21455 PF13458 Periplasmic binding protein ACR55_RS21460 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS21465 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS21470 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS21470 PF00005 ABC transporter ACR55_RS21475 PF00005 ABC transporter ACR55_RS21480 PF00795 Carbon-nitrogen hydrolase ACR55_RS21485 PF13816 Haem-containing dehydratase ACR55_RS21490 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS21490 PF14759 Reductase C-terminal ACR55_RS21495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACR55_RS21505 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS21510 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS21510 PF11862 Domain of unknown function (DUF3382) ACR55_RS21515 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACR55_RS21515 PF00005 ABC transporter ACR55_RS21520 PF00005 ABC transporter ACR55_RS21535 PF01522 Polysaccharide deacetylase ACR55_RS21540 PF00067 Cytochrome P450 ACR55_RS21545 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS21555 PF01425 Amidase ACR55_RS21570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACR55_RS21570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACR55_RS21575 PF00175 Oxidoreductase NAD-binding domain ACR55_RS21575 PF00111 2Fe-2S iron-sulfur cluster binding domain ACR55_RS21575 PF00970 Oxidoreductase FAD-binding domain ACR55_RS21580 PF09084 NMT1/THI5 like ACR55_RS21585 PF00355 Rieske [2Fe-2S] domain ACR55_RS21590 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS21600 PF01425 Amidase ACR55_RS21625 PF00005 ABC transporter ACR55_RS21630 PF01380 SIS domain ACR55_RS21635 PF01037 Lrp/AsnC ligand binding domain ACR55_RS21645 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACR55_RS21645 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACR55_RS21645 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACR55_RS21650 PF07690 Major Facilitator Superfamily ACR55_RS21655 PF12804 MobA-like NTP transferase domain ACR55_RS21655 PF14602 Hexapeptide repeat of succinyl-transferase ACR55_RS21655 PF00132 Bacterial transferase hexapeptide (six repeats) ACR55_RS21675 PF02630 SCO1/SenC ACR55_RS21680 PF01040 UbiA prenyltransferase family ACR55_RS21685 PF02628 Cytochrome oxidase assembly protein ACR55_RS21705 PF00510 Cytochrome c oxidase subunit III ACR55_RS21720 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACR55_RS21725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACR55_RS21725 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ACR55_RS21730 PF00293 NUDIX domain ACR55_RS21735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ACR55_RS21735 PF00356 Bacterial regulatory proteins, lacI family ACR55_RS21740 PF00999 Sodium/hydrogen exchanger family ACR55_RS21745 PF00149 Calcineurin-like phosphoesterase ACR55_RS21750 PF04545 Sigma-70, region 4 ACR55_RS21750 PF04542 Sigma-70 region 2 ACR55_RS21755 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACR55_RS21755 PF03625 Domain of unknown function DUF302 ACR55_RS21765 PF00756 Putative esterase ACR55_RS21770 PF00107 Zinc-binding dehydrogenase ACR55_RS21770 PF08240 Alcohol dehydrogenase GroES-like domain ACR55_RS21780 PF00310 Glutamine amidotransferases class-II ACR55_RS21780 PF01493 GXGXG motif ACR55_RS21780 PF04898 Glutamate synthase central domain ACR55_RS21780 PF01645 Conserved region in glutamate synthase ACR55_RS21785 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACR55_RS21785 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACR55_RS21790 PF03922 OmpW family ACR55_RS21795 PF00005 ABC transporter ACR55_RS21800 PF02405 Permease MlaE ACR55_RS21805 PF02470 MlaD protein ACR55_RS21810 PF04333 MlaA lipoprotein ACR55_RS21820 PF00005 ABC transporter ACR55_RS21825 PF01061 ABC-2 type transporter ACR55_RS21830 PF01722 BolA-like protein ACR55_RS21835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACR55_RS21840 PF01634 ATP phosphoribosyltransferase ACR55_RS21845 PF00815 Histidinol dehydrogenase ACR55_RS21850 PF00155 Aminotransferase class I and II ACR55_RS21855 PF00475 Imidazoleglycerol-phosphate dehydratase ACR55_RS21860 PF00117 Glutamine amidotransferase class-I ACR55_RS21865 PF00977 Histidine biosynthesis protein ACR55_RS21870 PF00977 Histidine biosynthesis protein ACR55_RS21875 PF01502 Phosphoribosyl-AMP cyclohydrolase ACR55_RS21880 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ACR55_RS21885 PF01230 HIT domain ACR55_RS21890 PF02416 mttA/Hcf106 family ACR55_RS21895 PF02416 mttA/Hcf106 family ACR55_RS21900 PF00902 Sec-independent protein translocase protein (TatC) ACR55_RS21905 PF13180 PDZ domain ACR55_RS21910 PF01784 NIF3 (NGG1p interacting factor 3) ACR55_RS21915 PF01741 Large-conductance mechanosensitive channel, MscL ACR55_RS21920 PF00355 Rieske [2Fe-2S] domain ACR55_RS21920 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ACR55_RS21925 PF00033 Cytochrome b/b6/petB ACR55_RS21925 PF00032 Cytochrome b(C-terminal)/b6/petD ACR55_RS21930 PF02167 Cytochrome C1 family ACR55_RS21935 PF02798 Glutathione S-transferase, N-terminal domain ACR55_RS21935 PF00043 Glutathione S-transferase, C-terminal domain ACR55_RS21940 PF04386 Stringent starvation protein B ACR55_RS21950 PF02146 Sir2 family ACR55_RS21955 PF01425 Amidase ACR55_RS21965 PF00892 EamA-like transporter family ACR55_RS21980 PF11067 Protein of unknown function (DUF2868) ACR55_RS21985 PF01926 50S ribosome-binding GTPase ACR55_RS21985 PF10396 GTP-binding protein TrmE N-terminus ACR55_RS21985 PF12631 MnmE helical domain ACR55_RS21990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS21995 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS22000 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS22000 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS22005 PF00005 ABC transporter ACR55_RS22005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS22010 PF04536 TPM domain ACR55_RS22020 PF00270 DEAD/DEAH box helicase ACR55_RS22020 PF00271 Helicase conserved C-terminal domain ACR55_RS22025 PF01810 LysE type translocator ACR55_RS22030 PF00009 Elongation factor Tu GTP binding domain ACR55_RS22030 PF03144 Elongation factor Tu domain 2 ACR55_RS22030 PF16658 Class II release factor RF3, C-terminal domain ACR55_RS22040 PF00210 Ferritin-like domain ACR55_RS22050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS22050 PF03466 LysR substrate binding domain ACR55_RS22060 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACR55_RS22060 PF04552 Sigma-54, DNA binding domain ACR55_RS22060 PF04963 Sigma-54 factor, core binding domain ACR55_RS22070 PF08502 LeuA allosteric (dimerisation) domain ACR55_RS22070 PF00682 HMGL-like ACR55_RS22075 PF01425 Amidase ACR55_RS22080 PF00356 Bacterial regulatory proteins, lacI family ACR55_RS22095 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS22100 PF08402 TOBE domain ACR55_RS22100 PF00005 ABC transporter ACR55_RS22105 PF00149 Calcineurin-like phosphoesterase ACR55_RS22110 PF17912 MalK OB fold domain ACR55_RS22110 PF00005 ABC transporter ACR55_RS22115 PF13416 Bacterial extracellular solute-binding protein ACR55_RS22120 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS22125 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS22140 PF05746 DALR anticodon binding domain ACR55_RS22140 PF03485 Arginyl tRNA synthetase N terminal domain ACR55_RS22140 PF00750 tRNA synthetases class I (R) ACR55_RS22150 PF01323 DSBA-like thioredoxin domain ACR55_RS22150 PF00085 Thioredoxin ACR55_RS22155 PF00563 EAL domain ACR55_RS22155 PF12792 CSS motif domain associated with EAL ACR55_RS22160 PF01053 Cys/Met metabolism PLP-dependent enzyme ACR55_RS22165 PF01810 LysE type translocator ACR55_RS22175 PF00376 MerR family regulatory protein ACR55_RS22175 PF09278 MerR, DNA binding ACR55_RS22180 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS22185 PF07687 Peptidase dimerisation domain ACR55_RS22185 PF01546 Peptidase family M20/M25/M40 ACR55_RS22190 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS22190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS22190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS22195 PF00108 Thiolase, N-terminal domain ACR55_RS22195 PF02803 Thiolase, C-terminal domain ACR55_RS22200 PF01039 Carboxyl transferase domain ACR55_RS22205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACR55_RS22205 PF00289 Biotin carboxylase, N-terminal domain ACR55_RS22205 PF00364 Biotin-requiring enzyme ACR55_RS22205 PF02785 Biotin carboxylase C-terminal domain ACR55_RS22215 PF00202 Aminotransferase class-III ACR55_RS22220 PF14031 Putative serine dehydratase domain ACR55_RS22220 PF01168 Alanine racemase, N-terminal domain ACR55_RS22225 PF16868 NMT1-like family ACR55_RS22235 PF00593 TonB dependent receptor ACR55_RS22235 PF07715 TonB-dependent Receptor Plug Domain ACR55_RS22240 PF04361 Protein of unknown function (DUF494) ACR55_RS22245 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACR55_RS22255 PF01751 Toprim domain ACR55_RS22255 PF01131 DNA topoisomerase ACR55_RS22265 PF00005 ABC transporter ACR55_RS22265 PF08402 TOBE domain ACR55_RS22270 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS22280 PF00171 Aldehyde dehydrogenase family ACR55_RS22290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACR55_RS22290 PF00205 Thiamine pyrophosphate enzyme, central domain ACR55_RS22290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACR55_RS22295 PF01037 Lrp/AsnC ligand binding domain ACR55_RS22300 PF01062 Bestrophin, RFP-TM, chloride channel ACR55_RS22310 PF13460 NAD(P)H-binding ACR55_RS22315 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACR55_RS22330 PF13460 NAD(P)H-binding ACR55_RS22335 PF02558 Ketopantoate reductase PanE/ApbA ACR55_RS22335 PF08546 Ketopantoate reductase PanE/ApbA C terminal ACR55_RS22345 PF02608 ABC transporter substrate-binding protein PnrA-like ACR55_RS22350 PF00005 ABC transporter ACR55_RS22355 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS22360 PF02653 Branched-chain amino acid transport system / permease component ACR55_RS22365 PF07969 Amidohydrolase family ACR55_RS22370 PF00043 Glutathione S-transferase, C-terminal domain ACR55_RS22370 PF02798 Glutathione S-transferase, N-terminal domain ACR55_RS22375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS22375 PF03466 LysR substrate binding domain ACR55_RS22380 PF02515 CoA-transferase family III ACR55_RS22395 PF00384 Molybdopterin oxidoreductase ACR55_RS22395 PF01568 Molydopterin dinucleotide binding domain ACR55_RS22400 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS22405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACR55_RS22405 PF02770 Acyl-CoA dehydrogenase, middle domain ACR55_RS22405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACR55_RS22410 PF02515 CoA-transferase family III ACR55_RS22415 PF05995 Cysteine dioxygenase type I ACR55_RS22420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS22420 PF03466 LysR substrate binding domain ACR55_RS22425 PF06445 GyrI-like small molecule binding domain ACR55_RS22430 PF01070 FMN-dependent dehydrogenase ACR55_RS22435 PF00708 Acylphosphatase ACR55_RS22440 PF08361 MAATS-type transcriptional repressor, C-terminal region ACR55_RS22440 PF00440 Bacterial regulatory proteins, tetR family ACR55_RS22450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS22450 PF18053 DNA gyrase B subunit insert domain ACR55_RS22450 PF00986 DNA gyrase B subunit, carboxyl terminus ACR55_RS22450 PF00204 DNA gyrase B ACR55_RS22450 PF01751 Toprim domain ACR55_RS22455 PF02768 DNA polymerase III beta subunit, C-terminal domain ACR55_RS22455 PF02767 DNA polymerase III beta subunit, central domain ACR55_RS22455 PF00712 DNA polymerase III beta subunit, N-terminal domain ACR55_RS22460 PF11638 DnaA N-terminal domain ACR55_RS22460 PF00308 Bacterial dnaA protein ACR55_RS22460 PF08299 Bacterial dnaA protein helix-turn-helix ACR55_RS22465 PF00468 Ribosomal protein L34 ACR55_RS22470 PF00825 Ribonuclease P ACR55_RS22475 PF02096 60Kd inner membrane protein ACR55_RS22475 PF14849 YidC periplasmic domain ACR55_RS22480 PF00141 Peroxidase ACR55_RS22485 PF01546 Peptidase family M20/M25/M40 ACR55_RS22485 PF07687 Peptidase dimerisation domain ACR55_RS22490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS22490 PF00005 ABC transporter ACR55_RS22495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACR55_RS22495 PF00005 ABC transporter ACR55_RS22500 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS22500 PF12911 N-terminal TM domain of oligopeptide transport permease C ACR55_RS22505 PF00528 Binding-protein-dependent transport system inner membrane component ACR55_RS22510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACR55_RS22515 PF01926 50S ribosome-binding GTPase ACR55_RS22515 PF12631 MnmE helical domain ACR55_RS22515 PF10396 GTP-binding protein TrmE N-terminus ACR55_RS22520 PF00326 Prolyl oligopeptidase family ACR55_RS22520 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ACR55_RS22525 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS22530 PF04209 homogentisate 1,2-dioxygenase ACR55_RS22540 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACR55_RS22550 PF01494 FAD binding domain ACR55_RS22555 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS22565 PF03466 LysR substrate binding domain ACR55_RS22565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS22570 PF03949 Malic enzyme, NAD binding domain ACR55_RS22570 PF00390 Malic enzyme, N-terminal domain ACR55_RS22570 PF01515 Phosphate acetyl/butaryl transferase ACR55_RS22575 PF00486 Transcriptional regulatory protein, C terminal ACR55_RS22575 PF00072 Response regulator receiver domain ACR55_RS22580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS22580 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS22595 PF01970 Tripartite tricarboxylate transporter TctA family ACR55_RS22600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACR55_RS22600 PF03466 LysR substrate binding domain ACR55_RS22605 PF03737 Aldolase/RraA ACR55_RS22610 PF03401 Tripartite tricarboxylate transporter family receptor ACR55_RS22620 PF00155 Aminotransferase class I and II ACR55_RS22625 PF00313 'Cold-shock' DNA-binding domain ACR55_RS22635 PF00005 ABC transporter ACR55_RS22645 PF01478 Type IV leader peptidase family ACR55_RS22645 PF06750 Bacterial Peptidase A24 N-terminal domain ACR55_RS22650 PF00392 Bacterial regulatory proteins, gntR family ACR55_RS22650 PF07702 UTRA domain ACR55_RS22660 PF00512 His Kinase A (phospho-acceptor) domain ACR55_RS22660 PF00072 Response regulator receiver domain ACR55_RS22660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACR55_RS22660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACR55_RS22660 PF01627 Hpt domain ACR55_RS22660 PF00672 HAMP domain