locus-tag class description D558_RS00040 PF01527 Transposase D558_RS00045 PF13276 HTH-like domain D558_RS00045 PF00665 Integrase core domain D558_RS00045 PF13333 Integrase core domain D558_RS00055 PF00990 Diguanylate cyclase, GGDEF domain D558_RS00060 PF13683 Integrase core domain D558_RS00060 PF13276 HTH-like domain D558_RS00065 PF01527 Transposase D558_RS00070 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS00070 PF01610 Transposase D558_RS00070 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS00080 PF01047 MarR family D558_RS00085 PF02321 Outer membrane efflux protein D558_RS00090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D558_RS00090 PF00529 HlyD membrane-fusion protein of T1SS D558_RS00095 PF07690 Major Facilitator Superfamily D558_RS00120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D558_RS00125 PF00202 Aminotransferase class-III D558_RS00130 PF05872 Bacterial protein of unknown function (DUF853) D558_RS00135 PF01709 Transcriptional regulator D558_RS00140 PF02843 Phosphoribosylglycinamide synthetase, C domain D558_RS00140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D558_RS00140 PF02844 Phosphoribosylglycinamide synthetase, N domain D558_RS00145 PF01218 Coproporphyrinogen III oxidase D558_RS00160 PF02590 Predicted SPOUT methyltransferase D558_RS00165 PF02545 Maf-like protein D558_RS00175 PF00512 His Kinase A (phospho-acceptor) domain D558_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS00175 PF02743 Cache domain D558_RS00180 PF02954 Bacterial regulatory protein, Fis family D558_RS00180 PF00072 Response regulator receiver domain D558_RS00180 PF00158 Sigma-54 interaction domain D558_RS00185 PF00291 Pyridoxal-phosphate dependent enzyme D558_RS00205 PF13847 Methyltransferase domain D558_RS00205 PF10119 Predicted methyltransferase regulatory domain D558_RS00210 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS00210 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS00210 PF01610 Transposase D558_RS00215 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS00215 PF01610 Transposase D558_RS00215 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS00230 PF00005 ABC transporter D558_RS00235 PF00950 ABC 3 transport family D558_RS00240 PF00950 ABC 3 transport family D558_RS00250 PF01610 Transposase D558_RS00250 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS00250 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS00255 PF13360 PQQ-like domain D558_RS00255 PF01011 PQQ enzyme repeat D558_RS00265 PF00593 TonB dependent receptor D558_RS00265 PF07715 TonB-dependent Receptor Plug Domain D558_RS00270 PF07690 Major Facilitator Superfamily D558_RS00285 PF01842 ACT domain D558_RS00285 PF00696 Amino acid kinase family D558_RS00285 PF13840 ACT domain D558_RS00290 PF01171 PP-loop family D558_RS00290 PF09179 TilS substrate binding domain D558_RS00295 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D558_RS00300 PF02805 Metal binding domain of Ada D558_RS00300 PF06029 AlkA N-terminal domain D558_RS00300 PF00730 HhH-GPD superfamily base excision DNA repair protein D558_RS00300 PF12833 Helix-turn-helix domain D558_RS00305 PF01406 tRNA synthetases class I (C) catalytic domain D558_RS00305 PF09190 DALR domain D558_RS00315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D558_RS00320 PF00149 Calcineurin-like phosphoesterase D558_RS00325 PF02673 Bacitracin resistance protein BacA D558_RS00330 PF03741 Integral membrane protein TerC family D558_RS00330 PF03471 Transporter associated domain D558_RS00335 PF00459 Inositol monophosphatase family D558_RS00340 PF00588 SpoU rRNA Methylase family D558_RS00345 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS00355 PF00924 Mechanosensitive ion channel D558_RS00355 PF05552 Conserved TM helix D558_RS00380 PF09084 NMT1/THI5 like D558_RS00390 PF12857 TOBE-like domain D558_RS00390 PF00005 ABC transporter D558_RS00400 PF01425 Amidase D558_RS00405 PF00392 Bacterial regulatory proteins, gntR family D558_RS00405 PF07729 FCD domain D558_RS00420 PF03358 NADPH-dependent FMN reductase D558_RS00425 PF07311 Dodecin D558_RS00435 PF00107 Zinc-binding dehydrogenase D558_RS00435 PF08240 Alcohol dehydrogenase GroES-like domain D558_RS00445 PF01624 MutS domain I D558_RS00445 PF05190 MutS family domain IV D558_RS00445 PF05188 MutS domain II D558_RS00445 PF05192 MutS domain III D558_RS00445 PF00488 MutS domain V D558_RS00450 PF08007 Cupin superfamily protein D558_RS00460 PF06804 NlpB/DapX lipoprotein D558_RS00465 PF00701 Dihydrodipicolinate synthetase family D558_RS00470 PF02163 Peptidase family M50 D558_RS00475 PF01300 Telomere recombination D558_RS00480 PF04228 Putative neutral zinc metallopeptidase D558_RS00500 PF02627 Carboxymuconolactone decarboxylase family D558_RS00510 PF13396 Phospholipase_D-nuclease N-terminal D558_RS00510 PF13091 PLD-like domain D558_RS00515 PF07690 Major Facilitator Superfamily D558_RS00530 PF00291 Pyridoxal-phosphate dependent enzyme D558_RS00535 PF01527 Transposase D558_RS00540 PF13333 Integrase core domain D558_RS00540 PF00665 Integrase core domain D558_RS00540 PF13276 HTH-like domain D558_RS00545 PF01527 Transposase D558_RS00550 PF03466 LysR substrate binding domain D558_RS00550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS00595 PF00563 EAL domain D558_RS00595 PF00990 Diguanylate cyclase, GGDEF domain D558_RS00595 PF13426 PAS domain D558_RS00610 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS00620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS00620 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS00620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS00625 PF02515 CoA-transferase family III D558_RS00630 PF00392 Bacterial regulatory proteins, gntR family D558_RS00630 PF07729 FCD domain D558_RS00655 PF04542 Sigma-70 region 2 D558_RS00655 PF08281 Sigma-70, region 4 D558_RS00670 PF01527 Transposase D558_RS00675 PF13683 Integrase core domain D558_RS00675 PF13276 HTH-like domain D558_RS00695 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS00700 PF01557 Fumarylacetoacetate (FAA) hydrolase family D558_RS00720 PF00005 ABC transporter D558_RS00725 PF01032 FecCD transport family D558_RS00735 PF01497 Periplasmic binding protein D558_RS00740 PF13439 Glycosyltransferase Family 4 D558_RS00740 PF00534 Glycosyl transferases group 1 D558_RS00745 PF03840 Preprotein translocase SecG subunit D558_RS00750 PF00121 Triosephosphate isomerase D558_RS00755 PF00698 Acyl transferase domain D558_RS00755 PF08659 KR domain D558_RS00755 PF14765 Polyketide synthase dehydratase D558_RS00755 PF00550 Phosphopantetheine attachment site D558_RS00755 PF08240 Alcohol dehydrogenase GroES-like domain D558_RS00775 PF01610 Transposase D558_RS00775 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS00775 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS00780 PF00543 Nitrogen regulatory protein P-II D558_RS00790 PF00924 Mechanosensitive ion channel D558_RS00805 PF13411 MerR HTH family regulatory protein D558_RS00815 PF01435 Peptidase family M48 D558_RS00830 PF00005 ABC transporter D558_RS00835 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS00845 PF00378 Enoyl-CoA hydratase/isomerase D558_RS00850 PF02515 CoA-transferase family III D558_RS00855 PF01425 Amidase D558_RS00860 PF00392 Bacterial regulatory proteins, gntR family D558_RS00860 PF07729 FCD domain D558_RS00865 PF13018 Extended Signal Peptide of Type V secretion system D558_RS00865 PF16168 Adhesin of bacterial autotransporter system, probable stalk D558_RS00865 PF03797 Autotransporter beta-domain D558_RS00865 PF03212 Pertactin D558_RS00870 PF16168 Adhesin of bacterial autotransporter system, probable stalk D558_RS00870 PF03797 Autotransporter beta-domain D558_RS00870 PF03212 Pertactin D558_RS00875 PF13683 Integrase core domain D558_RS00875 PF13276 HTH-like domain D558_RS00880 PF13276 HTH-like domain D558_RS00880 PF13683 Integrase core domain D558_RS00885 PF01527 Transposase D558_RS00910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D558_RS00910 PF02403 Seryl-tRNA synthetase N-terminal domain D558_RS00920 PF03548 Outer membrane lipoprotein carrier protein LolA D558_RS00925 PF17854 FtsK alpha domain D558_RS00925 PF09397 Ftsk gamma domain D558_RS00925 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D558_RS00925 PF01580 FtsK/SpoIIIE family D558_RS00930 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS00935 PF00488 MutS domain V D558_RS00935 PF01713 Smr domain D558_RS00940 PF00893 Small Multidrug Resistance protein D558_RS00950 PF00474 Sodium:solute symporter family D558_RS00960 PF03814 Potassium-transporting ATPase A subunit D558_RS00970 PF02669 K+-transporting ATPase, c chain D558_RS00975 PF00512 His Kinase A (phospho-acceptor) domain D558_RS00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS00975 PF13492 GAF domain D558_RS00975 PF13493 Domain of unknown function (DUF4118) D558_RS00975 PF02702 Osmosensitive K+ channel His kinase sensor domain D558_RS00980 PF00072 Response regulator receiver domain D558_RS00980 PF00486 Transcriptional regulatory protein, C terminal D558_RS00995 PF00180 Isocitrate/isopropylmalate dehydrogenase D558_RS01010 PF00034 Cytochrome c D558_RS01035 PF05193 Peptidase M16 inactive domain D558_RS01035 PF00675 Insulinase (Peptidase family M16) D558_RS01040 PF00684 DnaJ central domain D558_RS01040 PF01556 DnaJ C terminal domain D558_RS01040 PF00226 DnaJ domain D558_RS01045 PF00012 Hsp70 protein D558_RS01055 PF01025 GrpE D558_RS01065 PF00762 Ferrochelatase D558_RS01070 PF01628 HrcA protein C terminal domain D558_RS01070 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D558_RS01075 PF01513 ATP-NAD kinase D558_RS01080 PF02463 RecF/RecN/SMC N terminal domain D558_RS01085 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS01085 PF01610 Transposase D558_RS01085 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS01090 PF13276 HTH-like domain D558_RS01090 PF13683 Integrase core domain D558_RS01095 PF01527 Transposase D558_RS01100 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS01100 PF01610 Transposase D558_RS01100 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS01105 PF01475 Ferric uptake regulator family D558_RS01110 PF04355 SmpA / OmlA family D558_RS01115 PF05173 Dihydrodipicolinate reductase, C-terminus D558_RS01115 PF01113 Dihydrodipicolinate reductase, N-terminus D558_RS01120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D558_RS01120 PF01565 FAD binding domain D558_RS01130 PF00665 Integrase core domain D558_RS01130 PF13333 Integrase core domain D558_RS01130 PF13276 HTH-like domain D558_RS01135 PF01527 Transposase D558_RS01140 PF13683 Integrase core domain D558_RS01140 PF13276 HTH-like domain D558_RS01155 PF00330 Aconitase family (aconitate hydratase) D558_RS01155 PF00694 Aconitase C-terminal domain D558_RS01160 PF04303 PrpF protein D558_RS01165 PF01810 LysE type translocator D558_RS01170 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS01200 PF00694 Aconitase C-terminal domain D558_RS01200 PF00330 Aconitase family (aconitate hydratase) D558_RS01205 PF01979 Amidohydrolase family D558_RS01210 PF00857 Isochorismatase family D558_RS01245 PF03466 LysR substrate binding domain D558_RS01245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS01255 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D558_RS01260 PF04377 Arginine-tRNA-protein transferase, C terminus D558_RS01260 PF04376 Arginine-tRNA-protein transferase, N terminus D558_RS01265 PF01180 Dihydroorotate dehydrogenase D558_RS01270 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS01270 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS01270 PF01610 Transposase D558_RS01275 PF01527 Transposase D558_RS01280 PF13276 HTH-like domain D558_RS01280 PF13683 Integrase core domain D558_RS01285 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS01285 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS01285 PF01610 Transposase D558_RS01295 PF01610 Transposase D558_RS01295 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS01295 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS01300 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS01305 PF01614 Bacterial transcriptional regulator D558_RS01305 PF09339 IclR helix-turn-helix domain D558_RS01325 PF00271 Helicase conserved C-terminal domain D558_RS01325 PF00270 DEAD/DEAH box helicase D558_RS01360 PF00483 Nucleotidyl transferase D558_RS01375 PF00690 Cation transporter/ATPase, N-terminus D558_RS01375 PF00689 Cation transporting ATPase, C-terminus D558_RS01380 PF13683 Integrase core domain D558_RS01380 PF13276 HTH-like domain D558_RS01385 PF01527 Transposase D558_RS01405 PF01494 FAD binding domain D558_RS01420 PF01207 Dihydrouridine synthase (Dus) D558_RS01425 PF02954 Bacterial regulatory protein, Fis family D558_RS01430 PF01808 AICARFT/IMPCHase bienzyme D558_RS01430 PF02142 MGS-like domain D558_RS01435 PF02075 Crossover junction endodeoxyribonuclease RuvC D558_RS01440 PF07499 RuvA, C-terminal domain D558_RS01440 PF01330 RuvA N terminal domain D558_RS01455 PF05491 RuvB C-terminal winged helix domain D558_RS01455 PF05496 Holliday junction DNA helicase RuvB P-loop domain D558_RS01455 PF17864 RuvB AAA lid domain D558_RS01460 PF00570 HRDC domain D558_RS01460 PF09382 RQC domain D558_RS01460 PF16124 RecQ zinc-binding D558_RS01460 PF00271 Helicase conserved C-terminal domain D558_RS01460 PF00270 DEAD/DEAH box helicase D558_RS01470 PF00072 Response regulator receiver domain D558_RS01470 PF00486 Transcriptional regulatory protein, C terminal D558_RS01480 PF02322 Cytochrome bd terminal oxidase subunit II D558_RS01490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D558_RS01490 PF00749 tRNA synthetases class I (E and Q), catalytic domain D558_RS01500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D558_RS01505 PF03776 Septum formation topological specificity factor MinE D558_RS01510 PF01610 Transposase D558_RS01510 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS01510 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS01525 PF12848 ABC transporter D558_RS01525 PF00005 ABC transporter D558_RS01540 PF00005 ABC transporter D558_RS01540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS01545 PF00005 ABC transporter D558_RS01545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS01550 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS01550 PF12911 N-terminal TM domain of oligopeptide transport permease C D558_RS01555 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS01560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D558_RS01565 PF00535 Glycosyl transferase family 2 D558_RS01570 PF03466 LysR substrate binding domain D558_RS01570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS01575 PF00884 Sulfatase D558_RS01580 PF07943 Penicillin-binding protein 5, C-terminal domain D558_RS01580 PF00768 D-alanyl-D-alanine carboxypeptidase D558_RS01590 PF01810 LysE type translocator D558_RS01600 PF00107 Zinc-binding dehydrogenase D558_RS01600 PF08240 Alcohol dehydrogenase GroES-like domain D558_RS01605 PF00989 PAS fold D558_RS01605 PF00512 His Kinase A (phospho-acceptor) domain D558_RS01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS01610 PF00072 Response regulator receiver domain D558_RS01610 PF00196 Bacterial regulatory proteins, luxR family D558_RS01620 PF07729 FCD domain D558_RS01620 PF00392 Bacterial regulatory proteins, gntR family D558_RS01630 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS01640 PF00890 FAD binding domain D558_RS01640 PF14537 Cytochrome c3 D558_RS01645 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS01650 PF00270 DEAD/DEAH box helicase D558_RS01650 PF03880 DbpA RNA binding domain D558_RS01650 PF00271 Helicase conserved C-terminal domain D558_RS01655 PF00924 Mechanosensitive ion channel D558_RS01665 PF00690 Cation transporter/ATPase, N-terminus D558_RS01665 PF00689 Cation transporting ATPase, C-terminus D558_RS01670 PF08281 Sigma-70, region 4 D558_RS01670 PF04542 Sigma-70 region 2 D558_RS01700 PF00465 Iron-containing alcohol dehydrogenase D558_RS01705 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS01715 PF13520 Amino acid permease D558_RS01720 PF01276 Orn/Lys/Arg decarboxylase, major domain D558_RS01720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D558_RS01720 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D558_RS01725 PF13520 Amino acid permease D558_RS01735 PF01527 Transposase D558_RS01740 PF13276 HTH-like domain D558_RS01740 PF13683 Integrase core domain D558_RS01750 PF00118 TCP-1/cpn60 chaperonin family D558_RS01760 PF01219 Prokaryotic diacylglycerol kinase D558_RS01765 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS01770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D558_RS01775 PF02464 Competence-damaged protein D558_RS01785 PF02769 AIR synthase related protein, C-terminal domain D558_RS01785 PF00586 AIR synthase related protein, N-terminal domain D558_RS01790 PF01029 NusB family D558_RS01795 PF00885 6,7-dimethyl-8-ribityllumazine synthase D558_RS01800 PF00925 GTP cyclohydrolase II D558_RS01800 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D558_RS01815 PF00593 TonB dependent receptor D558_RS01815 PF07715 TonB-dependent Receptor Plug Domain D558_RS01815 PF07660 Secretin and TonB N terminus short domain D558_RS01825 PF08281 Sigma-70, region 4 D558_RS01825 PF04542 Sigma-70 region 2 D558_RS01835 PF00005 ABC transporter D558_RS01840 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS01845 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS01855 PF02881 SRP54-type protein, helical bundle domain D558_RS01855 PF00448 SRP54-type protein, GTPase domain D558_RS01865 PF01467 Cytidylyltransferase-like D558_RS01870 PF00037 4Fe-4S binding domain D558_RS01875 PF03594 Benzoate membrane transport protein D558_RS01895 PF07715 TonB-dependent Receptor Plug Domain D558_RS01895 PF00593 TonB dependent receptor D558_RS01905 PF01610 Transposase D558_RS01905 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS01905 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS01910 PF01557 Fumarylacetoacetate (FAA) hydrolase family D558_RS01915 PF02515 CoA-transferase family III D558_RS01920 PF00378 Enoyl-CoA hydratase/isomerase D558_RS01925 PF00682 HMGL-like D558_RS01930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS01930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS01930 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS01940 PF00501 AMP-binding enzyme D558_RS01940 PF13193 AMP-binding enzyme C-terminal domain D558_RS01945 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS01950 PF00135 Carboxylesterase family D558_RS01955 PF03466 LysR substrate binding domain D558_RS01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS01970 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS01980 PF02913 FAD linked oxidases, C-terminal domain D558_RS01980 PF01565 FAD binding domain D558_RS01985 PF00175 Oxidoreductase NAD-binding domain D558_RS01985 PF00111 2Fe-2S iron-sulfur cluster binding domain D558_RS01990 PF00355 Rieske [2Fe-2S] domain D558_RS02000 PF00392 Bacterial regulatory proteins, gntR family D558_RS02000 PF07729 FCD domain D558_RS02010 PF07690 Major Facilitator Superfamily D558_RS02020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS02020 PF03466 LysR substrate binding domain D558_RS02025 PF00593 TonB dependent receptor D558_RS02025 PF07715 TonB-dependent Receptor Plug Domain D558_RS02045 PF01926 50S ribosome-binding GTPase D558_RS02045 PF06071 Protein of unknown function (DUF933) D558_RS02055 PF01195 Peptidyl-tRNA hydrolase D558_RS02060 PF01386 Ribosomal L25p family D558_RS02060 PF14693 Ribosomal protein TL5, C-terminal domain D558_RS02065 PF14572 Phosphoribosyl synthetase-associated domain D558_RS02065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D558_RS02075 PF00288 GHMP kinases N terminal domain D558_RS02075 PF08544 GHMP kinases C terminal D558_RS02080 PF03550 Outer membrane lipoprotein LolB D558_RS02090 PF06827 Zinc finger found in FPG and IleRS D558_RS02090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D558_RS02090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D558_RS02100 PF01494 FAD binding domain D558_RS02130 PF00884 Sulfatase D558_RS02135 PF00392 Bacterial regulatory proteins, gntR family D558_RS02135 PF07729 FCD domain D558_RS02145 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS02150 PF00512 His Kinase A (phospho-acceptor) domain D558_RS02150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS02150 PF00672 HAMP domain D558_RS02155 PF00486 Transcriptional regulatory protein, C terminal D558_RS02155 PF00072 Response regulator receiver domain D558_RS02160 PF02913 FAD linked oxidases, C-terminal domain D558_RS02160 PF01565 FAD binding domain D558_RS02170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D558_RS02170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D558_RS02170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D558_RS02170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D558_RS02175 PF00342 Phosphoglucose isomerase D558_RS02180 PF13477 Glycosyl transferase 4-like D558_RS02180 PF00534 Glycosyl transferases group 1 D558_RS02190 PF13439 Glycosyltransferase Family 4 D558_RS02190 PF00534 Glycosyl transferases group 1 D558_RS02195 PF00733 Asparagine synthase D558_RS02195 PF13537 Glutamine amidotransferase domain D558_RS02200 PF13439 Glycosyltransferase Family 4 D558_RS02200 PF00534 Glycosyl transferases group 1 D558_RS02210 PF01370 NAD dependent epimerase/dehydratase family D558_RS02215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D558_RS02215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D558_RS02215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D558_RS02220 PF00953 Glycosyl transferase family 4 D558_RS02225 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS02225 PF01610 Transposase D558_RS02225 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS02230 PF03232 Ubiquinone biosynthesis protein COQ7 D558_RS02240 PF00303 Thymidylate synthase D558_RS02245 PF00186 Dihydrofolate reductase D558_RS02250 PF00392 Bacterial regulatory proteins, gntR family D558_RS02250 PF00155 Aminotransferase class I and II D558_RS02255 PF00202 Aminotransferase class-III D558_RS02260 PF00171 Aldehyde dehydrogenase family D558_RS02270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D558_RS02280 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS02285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS02285 PF00005 ABC transporter D558_RS02305 PF02347 Glycine cleavage system P-protein D558_RS02310 PF01597 Glycine cleavage H-protein D558_RS02315 PF08669 Glycine cleavage T-protein C-terminal barrel domain D558_RS02315 PF01571 Aminomethyltransferase folate-binding domain D558_RS02325 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D558_RS02325 PF01276 Orn/Lys/Arg decarboxylase, major domain D558_RS02325 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D558_RS02335 PF13508 Acetyltransferase (GNAT) domain D558_RS02335 PF00583 Acetyltransferase (GNAT) family D558_RS02340 PF00692 dUTPase D558_RS02355 PF10609 NUBPL iron-transfer P-loop NTPase D558_RS02365 PF09334 tRNA synthetases class I (M) D558_RS02365 PF01588 Putative tRNA binding domain D558_RS02390 PF16970 Type-1 fimbrial protein, A D558_RS02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS02400 PF00512 His Kinase A (phospho-acceptor) domain D558_RS02405 PF00486 Transcriptional regulatory protein, C terminal D558_RS02405 PF00072 Response regulator receiver domain D558_RS02425 PF01032 FecCD transport family D558_RS02430 PF00127 Copper binding proteins, plastocyanin/azurin family D558_RS02435 PF00005 ABC transporter D558_RS02440 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS02445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D558_RS02445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D558_RS02450 PF02627 Carboxymuconolactone decarboxylase family D558_RS02470 PF01547 Bacterial extracellular solute-binding protein D558_RS02475 PF00005 ABC transporter D558_RS02475 PF08402 TOBE domain D558_RS02480 PF13609 Gram-negative porin D558_RS02495 PF03466 LysR substrate binding domain D558_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS02500 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS02505 PF02515 CoA-transferase family III D558_RS02510 PF00378 Enoyl-CoA hydratase/isomerase D558_RS02525 PF03466 LysR substrate binding domain D558_RS02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS02530 PF00149 Calcineurin-like phosphoesterase D558_RS02550 PF00392 Bacterial regulatory proteins, gntR family D558_RS02550 PF00155 Aminotransferase class I and II D558_RS02560 PF00881 Nitroreductase family D558_RS02565 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS02570 PF00753 Metallo-beta-lactamase superfamily D558_RS02570 PF01613 Flavin reductase like domain D558_RS02575 PF00296 Luciferase-like monooxygenase D558_RS02580 PF03466 LysR substrate binding domain D558_RS02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS02590 PF00378 Enoyl-CoA hydratase/isomerase D558_RS02595 PF13607 Succinyl-CoA ligase like flavodoxin domain D558_RS02595 PF13380 CoA binding domain D558_RS02600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS02600 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS02600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS02620 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS02625 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS02640 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS02645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D558_RS02645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D558_RS02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS02650 PF03466 LysR substrate binding domain D558_RS02675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D558_RS02680 PF03466 LysR substrate binding domain D558_RS02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS02685 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS02685 PF18158 Adaptive response protein AidB N-terminal domain D558_RS02685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS02690 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS02700 PF02390 Putative methyltransferase D558_RS02705 PF00561 alpha/beta hydrolase fold D558_RS02710 PF05690 Thiazole biosynthesis protein ThiG D558_RS02710 PF02597 ThiS family D558_RS02715 PF01527 Transposase D558_RS02720 PF13683 Integrase core domain D558_RS02720 PF13276 HTH-like domain D558_RS02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS02730 PF03466 LysR substrate binding domain D558_RS02735 PF01610 Transposase D558_RS02735 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS02735 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS02740 PF08402 TOBE domain D558_RS02740 PF00005 ABC transporter D558_RS02755 PF02881 SRP54-type protein, helical bundle domain D558_RS02755 PF00448 SRP54-type protein, GTPase domain D558_RS02755 PF02978 Signal peptide binding domain D558_RS02770 PF01510 N-acetylmuramoyl-L-alanine amidase D558_RS02775 PF13417 Glutathione S-transferase, N-terminal domain D558_RS02775 PF00043 Glutathione S-transferase, C-terminal domain D558_RS02780 PF00005 ABC transporter D558_RS02785 PF00005 ABC transporter D558_RS02785 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS02810 PF02653 Branched-chain amino acid transport system / permease component D558_RS02820 PF07286 Protein of unknown function (DUF1445) D558_RS02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS02830 PF00183 Hsp90 protein D558_RS02835 PF00860 Permease family D558_RS02850 PF01527 Transposase D558_RS02855 PF13276 HTH-like domain D558_RS02855 PF13683 Integrase core domain D558_RS02860 PF01527 Transposase D558_RS02870 PF05170 AsmA family D558_RS02875 PF05170 AsmA family D558_RS02880 PF03352 Methyladenine glycosylase D558_RS02885 PF03692 Putative zinc- or iron-chelating domain D558_RS02905 PF05962 HutD D558_RS02910 PF01979 Amidohydrolase family D558_RS02920 PF00155 Aminotransferase class I and II D558_RS02925 PF00793 DAHP synthetase I family D558_RS02930 PF05159 Capsule polysaccharide biosynthesis protein D558_RS02935 PF05159 Capsule polysaccharide biosynthesis protein D558_RS02945 PF01527 Transposase D558_RS02950 PF13276 HTH-like domain D558_RS02950 PF13683 Integrase core domain D558_RS02960 PF00106 short chain dehydrogenase D558_RS02975 PF03180 NLPA lipoprotein D558_RS02980 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS02985 PF00005 ABC transporter D558_RS02985 PF09383 NIL domain D558_RS02990 PF01055 Glycosyl hydrolases family 31 D558_RS02990 PF13802 Galactose mutarotase-like D558_RS02995 PF01266 FAD dependent oxidoreductase D558_RS02995 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D558_RS03000 PF00459 Inositol monophosphatase family D558_RS03005 PF13193 AMP-binding enzyme C-terminal domain D558_RS03005 PF00501 AMP-binding enzyme D558_RS03010 PF01546 Peptidase family M20/M25/M40 D558_RS03010 PF07687 Peptidase dimerisation domain D558_RS03015 PF03466 LysR substrate binding domain D558_RS03015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS03020 PF03601 Conserved hypothetical protein 698 D558_RS03025 PF03061 Thioesterase superfamily D558_RS03030 PF03448 MgtE intracellular N domain D558_RS03030 PF01769 Divalent cation transporter D558_RS03030 PF00571 CBS domain D558_RS03035 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP D558_RS03045 PF01037 Lrp/AsnC ligand binding domain D558_RS03055 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS03065 PF13683 Integrase core domain D558_RS03065 PF13276 HTH-like domain D558_RS03075 PF01527 Transposase D558_RS03080 PF01610 Transposase D558_RS03080 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS03080 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS03085 PF01145 SPFH domain / Band 7 family D558_RS03090 PF12221 Bacterial membrane protein N terminal D558_RS03090 PF01145 SPFH domain / Band 7 family D558_RS03095 PF01926 50S ribosome-binding GTPase D558_RS03095 PF16360 GTP-binding GTPase Middle Region D558_RS03095 PF13167 GTP-binding GTPase N-terminal D558_RS03100 PF17209 Hfq protein D558_RS03105 PF00155 Aminotransferase class I and II D558_RS03110 PF01926 50S ribosome-binding GTPase D558_RS03110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D558_RS03120 PF09976 Tetratricopeptide repeat-like domain D558_RS03125 PF13393 Histidyl-tRNA synthetase D558_RS03125 PF03129 Anticodon binding domain D558_RS03140 PF04055 Radical SAM superfamily D558_RS03145 PF00334 Nucleoside diphosphate kinase D558_RS03150 PF10458 Valyl tRNA synthetase tRNA binding arm D558_RS03150 PF00133 tRNA synthetases class I (I, L, M and V) D558_RS03150 PF08264 Anticodon-binding domain of tRNA D558_RS03155 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS03155 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS03155 PF01610 Transposase D558_RS03165 PF01782 RimM N-terminal domain D558_RS03170 PF00886 Ribosomal protein S16 D558_RS03175 PF01206 Sulfurtransferase TusA D558_RS03230 PF13683 Integrase core domain D558_RS03230 PF13276 HTH-like domain D558_RS03235 PF01527 Transposase D558_RS03240 PF13416 Bacterial extracellular solute-binding protein D558_RS03245 PF01266 FAD dependent oxidoreductase D558_RS03250 PF00111 2Fe-2S iron-sulfur cluster binding domain D558_RS03250 PF00970 Oxidoreductase FAD-binding domain D558_RS03250 PF00175 Oxidoreductase NAD-binding domain D558_RS03255 PF02261 Aspartate decarboxylase D558_RS03260 PF00893 Small Multidrug Resistance protein D558_RS03265 PF03476 MOSC N-terminal beta barrel domain D558_RS03265 PF00111 2Fe-2S iron-sulfur cluster binding domain D558_RS03265 PF03473 MOSC domain D558_RS03270 PF05721 Phytanoyl-CoA dioxygenase (PhyH) D558_RS03275 PF06339 Ectoine synthase D558_RS03280 PF00202 Aminotransferase class-III D558_RS03285 PF00583 Acetyltransferase (GNAT) family D558_RS03290 PF12802 MarR family D558_RS03310 PF04235 Protein of unknown function (DUF418) D558_RS03325 PF00204 DNA gyrase B D558_RS03325 PF00986 DNA gyrase B subunit, carboxyl terminus D558_RS03325 PF01751 Toprim domain D558_RS03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS03330 PF00085 Thioredoxin D558_RS03335 PF07497 Rho termination factor, RNA-binding domain D558_RS03335 PF07498 Rho termination factor, N-terminal domain D558_RS03335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D558_RS03345 PF03710 Glutamate-ammonia ligase adenylyltransferase D558_RS03345 PF08335 GlnD PII-uridylyltransferase D558_RS03350 PF02677 Epoxyqueuosine reductase QueH D558_RS03355 PF03313 Serine dehydratase alpha chain D558_RS03355 PF03315 Serine dehydratase beta chain D558_RS03360 PF02690 Na+/Pi-cotransporter D558_RS03365 PF13419 Haloacid dehalogenase-like hydrolase D558_RS03370 PF01738 Dienelactone hydrolase family D558_RS03375 PF02535 ZIP Zinc transporter D558_RS03385 PF06481 COX Aromatic Rich Motif D558_RS03385 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D558_RS03395 PF00510 Cytochrome c oxidase subunit III D558_RS03400 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D558_RS03410 PF01367 5'-3' exonuclease, C-terminal SAM fold D558_RS03410 PF00476 DNA polymerase family A D558_RS03410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D558_RS03410 PF01612 3'-5' exonuclease D558_RS03415 PF03641 Possible lysine decarboxylase D558_RS03435 PF01361 Tautomerase enzyme D558_RS03440 PF00005 ABC transporter D558_RS03440 PF00571 CBS domain D558_RS03445 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS03455 PF01610 Transposase D558_RS03455 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS03455 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS03465 PF07690 Major Facilitator Superfamily D558_RS03470 PF00830 Ribosomal L28 family D558_RS03475 PF00471 Ribosomal protein L33 D558_RS03485 PF01610 Transposase D558_RS03485 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS03485 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS03500 PF12802 MarR family D558_RS03505 PF07690 Major Facilitator Superfamily D558_RS03510 PF13603 Leucyl-tRNA synthetase, Domain 2 D558_RS03510 PF00133 tRNA synthetases class I (I, L, M and V) D558_RS03510 PF08264 Anticodon-binding domain of tRNA D558_RS03510 PF09334 tRNA synthetases class I (M) D558_RS03525 PF00171 Aldehyde dehydrogenase family D558_RS03545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D558_RS03545 PF00529 HlyD membrane-fusion protein of T1SS D558_RS03550 PF03412 Peptidase C39 family D558_RS03550 PF00005 ABC transporter D558_RS03550 PF00664 ABC transporter transmembrane region D558_RS03560 PF01527 Transposase D558_RS03565 PF13683 Integrase core domain D558_RS03565 PF13276 HTH-like domain D558_RS03595 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain D558_RS03595 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain D558_RS03605 PF12794 Mechanosensitive ion channel inner membrane domain 1 D558_RS03605 PF00924 Mechanosensitive ion channel D558_RS03605 PF12795 Mechanosensitive ion channel porin domain D558_RS03610 PF01925 Sulfite exporter TauE/SafE D558_RS03615 PF00892 EamA-like transporter family D558_RS03625 PF00929 Exonuclease D558_RS03625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D558_RS03625 PF02811 PHP domain D558_RS03625 PF07733 Bacterial DNA polymerase III alpha NTPase domain D558_RS03625 PF14480 DNA polymerase III polC-type N-terminus I D558_RS03625 PF11490 DNA polymerase III polC-type N-terminus II D558_RS03625 PF14579 Helix-hairpin-helix motif D558_RS03630 PF06434 Aconitate hydratase 2 N-terminus D558_RS03630 PF11791 Aconitate B N-terminal domain D558_RS03630 PF00330 Aconitase family (aconitate hydratase) D558_RS03650 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D558_RS03665 PF08207 Elongation factor P (EF-P) KOW-like domain D558_RS03665 PF01132 Elongation factor P (EF-P) OB domain D558_RS03665 PF09285 Elongation factor P, C-terminal D558_RS03680 PF00072 Response regulator receiver domain D558_RS03680 PF02954 Bacterial regulatory protein, Fis family D558_RS03680 PF00158 Sigma-54 interaction domain D558_RS03690 PF13683 Integrase core domain D558_RS03690 PF13276 HTH-like domain D558_RS03695 PF01527 Transposase D558_RS03725 PF00437 Type II/IV secretion system protein D558_RS03775 PF01047 MarR family D558_RS03785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D558_RS03790 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS03800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS03800 PF03466 LysR substrate binding domain D558_RS03810 PF00962 Adenosine/AMP deaminase D558_RS03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS03815 PF03466 LysR substrate binding domain D558_RS03820 PF03060 Nitronate monooxygenase D558_RS03825 PF03060 Nitronate monooxygenase D558_RS03830 PF00043 Glutathione S-transferase, C-terminal domain D558_RS03830 PF13417 Glutathione S-transferase, N-terminal domain D558_RS03850 PF00149 Calcineurin-like phosphoesterase D558_RS03860 PF00990 Diguanylate cyclase, GGDEF domain D558_RS03860 PF08448 PAS fold D558_RS03870 PF03466 LysR substrate binding domain D558_RS03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS03890 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS03895 PF03737 Aldolase/RraA D558_RS03900 PF04909 Amidohydrolase D558_RS03905 PF04303 PrpF protein D558_RS03910 PF03466 LysR substrate binding domain D558_RS03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS03915 PF04909 Amidohydrolase D558_RS03920 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS03925 PF00378 Enoyl-CoA hydratase/isomerase D558_RS03930 PF00392 Bacterial regulatory proteins, gntR family D558_RS03930 PF07729 FCD domain D558_RS03935 PF02515 CoA-transferase family III D558_RS03950 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D558_RS03955 PF03776 Septum formation topological specificity factor MinE D558_RS04020 PF02659 Putative manganese efflux pump D558_RS04025 PF01613 Flavin reductase like domain D558_RS04035 PF01063 Amino-transferase class IV D558_RS04040 PF07690 Major Facilitator Superfamily D558_RS04060 PF05666 Fels-1 Prophage Protein-like D558_RS04065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS04065 PF00005 ABC transporter D558_RS04070 PF00005 ABC transporter D558_RS04070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS04075 PF12911 N-terminal TM domain of oligopeptide transport permease C D558_RS04080 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS04085 PF01266 FAD dependent oxidoreductase D558_RS04100 PF01266 FAD dependent oxidoreductase D558_RS04110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D558_RS04120 PF02798 Glutathione S-transferase, N-terminal domain D558_RS04135 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase D558_RS04140 PF05199 GMC oxidoreductase D558_RS04140 PF00732 GMC oxidoreductase D558_RS04145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D558_RS04145 PF00034 Cytochrome c D558_RS04150 PF08281 Sigma-70, region 4 D558_RS04150 PF04542 Sigma-70 region 2 D558_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS04190 PF00005 ABC transporter D558_RS04195 PF00005 ABC transporter D558_RS04210 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS04215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS04215 PF03466 LysR substrate binding domain D558_RS04220 PF02515 CoA-transferase family III D558_RS04225 PF00378 Enoyl-CoA hydratase/isomerase D558_RS04230 PF00593 TonB dependent receptor D558_RS04230 PF07715 TonB-dependent Receptor Plug Domain D558_RS04245 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS04260 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS04265 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS04270 PF00005 ABC transporter D558_RS04280 PF03459 TOBE domain D558_RS04290 PF00005 ABC transporter D558_RS04300 PF11862 Domain of unknown function (DUF3382) D558_RS04300 PF02653 Branched-chain amino acid transport system / permease component D558_RS04310 PF01070 FMN-dependent dehydrogenase D558_RS04330 PF03466 LysR substrate binding domain D558_RS04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS04335 PF03466 LysR substrate binding domain D558_RS04335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS04340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D558_RS04340 PF13378 Enolase C-terminal domain-like D558_RS04345 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS04370 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS04395 PF01053 Cys/Met metabolism PLP-dependent enzyme D558_RS04405 PF02653 Branched-chain amino acid transport system / permease component D558_RS04410 PF02653 Branched-chain amino acid transport system / permease component D558_RS04410 PF11862 Domain of unknown function (DUF3382) D558_RS04415 PF00005 ABC transporter D558_RS04415 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS04420 PF00005 ABC transporter D558_RS04440 PF04715 Anthranilate synthase component I, N terminal region D558_RS04440 PF00425 chorismate binding enzyme D558_RS04450 PF00899 ThiF family D558_RS04460 PF02687 FtsX-like permease family D558_RS04460 PF00005 ABC transporter D558_RS04460 PF12704 MacB-like periplasmic core domain D558_RS04465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D558_RS04480 PF01243 Pyridoxamine 5'-phosphate oxidase D558_RS04480 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D558_RS04485 PF01613 Flavin reductase like domain D558_RS04490 PF01266 FAD dependent oxidoreductase D558_RS04495 PF00551 Formyl transferase D558_RS04505 PF03466 LysR substrate binding domain D558_RS04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS04510 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS04520 PF00206 Lyase D558_RS04520 PF10415 Fumarase C C-terminus D558_RS04525 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D558_RS04530 PF11741 AMIN domain D558_RS04530 PF01520 N-acetylmuramoyl-L-alanine amidase D558_RS04535 PF09335 SNARE associated Golgi protein D558_RS04540 PF01119 DNA mismatch repair protein, C-terminal domain D558_RS04540 PF08676 MutL C terminal dimerisation domain D558_RS04550 PF00586 AIR synthase related protein, N-terminal domain D558_RS04550 PF02769 AIR synthase related protein, C-terminal domain D558_RS04555 PF00308 Bacterial dnaA protein D558_RS04565 PF01743 Poly A polymerase head domain D558_RS04565 PF12627 Probable RNA and SrmB- binding site of polymerase A D558_RS04565 PF12626 Polymerase A arginine-rich C-terminus D558_RS04570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D558_RS04580 PF01527 Transposase D558_RS04585 PF13683 Integrase core domain D558_RS04585 PF13276 HTH-like domain D558_RS04600 PF02515 CoA-transferase family III D558_RS04615 PF00378 Enoyl-CoA hydratase/isomerase D558_RS04625 PF07702 UTRA domain D558_RS04625 PF00392 Bacterial regulatory proteins, gntR family D558_RS04630 PF00330 Aconitase family (aconitate hydratase) D558_RS04645 PF02091 Glycyl-tRNA synthetase alpha subunit D558_RS04660 PF01553 Acyltransferase D558_RS04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS04670 PF03466 LysR substrate binding domain D558_RS04685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D558_RS04690 PF01327 Polypeptide deformylase D558_RS04700 PF07670 Nucleoside recognition D558_RS04705 PF00224 Pyruvate kinase, barrel domain D558_RS04705 PF02887 Pyruvate kinase, alpha/beta domain D558_RS04710 PF02595 Glycerate kinase family D558_RS04725 PF04453 LPS transport system D D558_RS04730 PF01636 Phosphotransferase enzyme family D558_RS04735 PF00483 Nucleotidyl transferase D558_RS04745 PF01329 Pterin 4 alpha carbinolamine dehydratase D558_RS04750 PF00691 OmpA family D558_RS04750 PF13488 Glycine zipper D558_RS04760 PF00248 Aldo/keto reductase family D558_RS04770 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS04780 PF01527 Transposase D558_RS04785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D558_RS04785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D558_RS04790 PF13091 PLD-like domain D558_RS04795 PF00484 Carbonic anhydrase D558_RS04815 PF12146 Serine aminopeptidase, S33 D558_RS04825 PF02426 Muconolactone delta-isomerase D558_RS04830 PF01144 Coenzyme A transferase D558_RS04835 PF01144 Coenzyme A transferase D558_RS04840 PF09339 IclR helix-turn-helix domain D558_RS04840 PF01614 Bacterial transcriptional regulator D558_RS04850 PF02667 Short chain fatty acid transporter D558_RS04860 PF03797 Autotransporter beta-domain D558_RS04860 PF00082 Subtilase family D558_RS04865 PF00311 Phosphoenolpyruvate carboxylase D558_RS04870 PF06508 Queuosine biosynthesis protein QueC D558_RS04880 PF03466 LysR substrate binding domain D558_RS04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS04885 PF00920 Dehydratase family D558_RS04890 PF00356 Bacterial regulatory proteins, lacI family D558_RS04910 PF13649 Methyltransferase domain D558_RS04925 PF04055 Radical SAM superfamily D558_RS04940 PF01610 Transposase D558_RS04940 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS04940 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS04950 PF01527 Transposase D558_RS04955 PF13276 HTH-like domain D558_RS04955 PF13683 Integrase core domain D558_RS04965 PF02441 Flavoprotein D558_RS04970 PF00462 Glutaredoxin D558_RS04975 PF17827 PrmC N-terminal domain D558_RS04975 PF05175 Methyltransferase small domain D558_RS04980 PF00472 RF-1 domain D558_RS04980 PF03462 PCRF domain D558_RS04985 PF01488 Shikimate / quinate 5-dehydrogenase D558_RS04985 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D558_RS04985 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D558_RS05005 PF07715 TonB-dependent Receptor Plug Domain D558_RS05005 PF00593 TonB dependent receptor D558_RS05030 PF00916 Sulfate permease family D558_RS05030 PF01740 STAS domain D558_RS05035 PF13378 Enolase C-terminal domain-like D558_RS05035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D558_RS05040 PF04444 Catechol dioxygenase N terminus D558_RS05040 PF00775 Dioxygenase D558_RS05045 PF07690 Major Facilitator Superfamily D558_RS05050 PF00106 short chain dehydrogenase D558_RS05060 PF07715 TonB-dependent Receptor Plug Domain D558_RS05060 PF00593 TonB dependent receptor D558_RS05070 PF08281 Sigma-70, region 4 D558_RS05070 PF04542 Sigma-70 region 2 D558_RS05085 PF00348 Polyprenyl synthetase D558_RS05090 PF00829 Ribosomal prokaryotic L21 protein D558_RS05095 PF01016 Ribosomal L27 protein D558_RS05100 PF01018 GTP1/OBG D558_RS05100 PF01926 50S ribosome-binding GTPase D558_RS05105 PF01472 PUA domain D558_RS05105 PF00696 Amino acid kinase family D558_RS05125 PF07549 SecD/SecF GG Motif D558_RS05125 PF02355 Protein export membrane protein D558_RS05130 PF01964 Radical SAM ThiC family D558_RS05130 PF13667 ThiC-associated domain D558_RS05135 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS05135 PF01610 Transposase D558_RS05135 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS05140 PF03466 LysR substrate binding domain D558_RS05140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS05145 PF03741 Integral membrane protein TerC family D558_RS05150 PF02913 FAD linked oxidases, C-terminal domain D558_RS05150 PF01565 FAD binding domain D558_RS05160 PF00899 ThiF family D558_RS05165 PF03572 Peptidase family S41 D558_RS05165 PF13180 PDZ domain D558_RS05170 PF01551 Peptidase family M23 D558_RS05175 PF00300 Histidine phosphatase superfamily (branch 1) D558_RS05185 PF00462 Glutaredoxin D558_RS05190 PF02556 Preprotein translocase subunit SecB D558_RS05195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D558_RS05195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D558_RS05200 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS05205 PF00588 SpoU rRNA Methylase family D558_RS05215 PF08241 Methyltransferase domain D558_RS05225 PF02386 Cation transport protein D558_RS05235 PF02954 Bacterial regulatory protein, Fis family D558_RS05235 PF00158 Sigma-54 interaction domain D558_RS05235 PF00072 Response regulator receiver domain D558_RS05240 PF00672 HAMP domain D558_RS05240 PF00989 PAS fold D558_RS05240 PF00512 His Kinase A (phospho-acceptor) domain D558_RS05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS05250 PF01029 NusB family D558_RS05250 PF01189 16S rRNA methyltransferase RsmB/F D558_RS05255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS05255 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS05255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS05260 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS05265 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS05265 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS05265 PF01610 Transposase D558_RS05280 PF13193 AMP-binding enzyme C-terminal domain D558_RS05280 PF00501 AMP-binding enzyme D558_RS05285 PF07702 UTRA domain D558_RS05285 PF00392 Bacterial regulatory proteins, gntR family D558_RS05300 PF03466 LysR substrate binding domain D558_RS05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS05305 PF00171 Aldehyde dehydrogenase family D558_RS05320 PF13419 Haloacid dehalogenase-like hydrolase D558_RS05340 PF02911 Formyl transferase, C-terminal domain D558_RS05340 PF00551 Formyl transferase D558_RS05345 PF01327 Polypeptide deformylase D558_RS05350 PF00266 Aminotransferase class-V D558_RS05355 PF01037 Lrp/AsnC ligand binding domain D558_RS05360 PF04328 Selenoprotein, putative D558_RS05365 PF13722 5TM C-terminal transporter carbon starvation CstA D558_RS05365 PF02554 Carbon starvation protein CstA D558_RS05370 PF17200 Single Cache domain 2 D558_RS05370 PF07730 Histidine kinase D558_RS05375 PF00196 Bacterial regulatory proteins, luxR family D558_RS05375 PF00072 Response regulator receiver domain D558_RS05385 PF00682 HMGL-like D558_RS05395 PF00497 Bacterial extracellular solute-binding proteins, family 3 D558_RS05400 PF00155 Aminotransferase class I and II D558_RS05405 PF01168 Alanine racemase, N-terminal domain D558_RS05410 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS05425 PF03466 LysR substrate binding domain D558_RS05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS05430 PF01810 LysE type translocator D558_RS05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS05435 PF03466 LysR substrate binding domain D558_RS05440 PF13458 Periplasmic binding protein D558_RS05450 PF00005 ABC transporter D558_RS05450 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS05455 PF00005 ABC transporter D558_RS05465 PF00501 AMP-binding enzyme D558_RS05470 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS05470 PF00005 ABC transporter D558_RS05475 PF02653 Branched-chain amino acid transport system / permease component D558_RS05490 PF00005 ABC transporter D558_RS05495 PF00501 AMP-binding enzyme D558_RS05495 PF14535 AMP-binding enzyme C-terminal domain D558_RS05505 PF04143 Sulphur transport D558_RS05515 PF00753 Metallo-beta-lactamase superfamily D558_RS05540 PF06965 Na+/H+ antiporter 1 D558_RS05550 PF01475 Ferric uptake regulator family D558_RS05555 PF02311 AraC-like ligand binding domain D558_RS05555 PF12833 Helix-turn-helix domain D558_RS05560 PF01048 Phosphorylase superfamily D558_RS05565 PF03167 Uracil DNA glycosylase superfamily D558_RS05570 PF00270 DEAD/DEAH box helicase D558_RS05570 PF00271 Helicase conserved C-terminal domain D558_RS05575 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS05575 PF01610 Transposase D558_RS05575 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS05585 PF12627 Probable RNA and SrmB- binding site of polymerase A D558_RS05585 PF01743 Poly A polymerase head domain D558_RS05590 PF14718 Soluble lytic murein transglycosylase L domain D558_RS05590 PF01464 Transglycosylase SLT domain D558_RS05595 PF01812 5-formyltetrahydrofolate cyclo-ligase family D558_RS05610 PF01841 Transglutaminase-like superfamily D558_RS05610 PF08379 Bacterial transglutaminase-like N-terminal region D558_RS05635 PF05114 Protein of unknown function (DUF692) D558_RS05645 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS05650 PF02219 Methylenetetrahydrofolate reductase D558_RS05655 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV D558_RS05660 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D558_RS05660 PF05221 S-adenosyl-L-homocysteine hydrolase D558_RS05665 PF13439 Glycosyltransferase Family 4 D558_RS05665 PF00534 Glycosyl transferases group 1 D558_RS05680 PF00557 Metallopeptidase family M24 D558_RS05685 PF00438 S-adenosylmethionine synthetase, N-terminal domain D558_RS05685 PF02772 S-adenosylmethionine synthetase, central domain D558_RS05685 PF02773 S-adenosylmethionine synthetase, C-terminal domain D558_RS05700 PF01678 Diaminopimelate epimerase D558_RS05710 PF02899 Phage integrase, N-terminal SAM-like domain D558_RS05710 PF00589 Phage integrase family D558_RS05730 PF01297 Zinc-uptake complex component A periplasmic D558_RS05735 PF00950 ABC 3 transport family D558_RS05740 PF00005 ABC transporter D558_RS05745 PF01475 Ferric uptake regulator family D558_RS05750 PF02492 CobW/HypB/UreG, nucleotide-binding domain D558_RS05750 PF07683 Cobalamin synthesis protein cobW C-terminal domain D558_RS05755 PF01258 Prokaryotic dksA/traR C4-type zinc finger D558_RS05760 PF00227 Proteasome subunit D558_RS05765 PF00004 ATPase family associated with various cellular activities (AAA) D558_RS05765 PF07724 AAA domain (Cdc48 subfamily) D558_RS05775 PF01923 Cobalamin adenosyltransferase D558_RS05780 PF04055 Radical SAM superfamily D558_RS05780 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D558_RS05785 PF03099 Biotin/lipoate A/B protein ligase family D558_RS05790 PF04359 Protein of unknown function (DUF493) D558_RS05795 PF01063 Amino-transferase class IV D558_RS05800 PF07943 Penicillin-binding protein 5, C-terminal domain D558_RS05800 PF00768 D-alanyl-D-alanine carboxypeptidase D558_RS05820 PF00005 ABC transporter D558_RS05825 PF02405 Permease MlaE D558_RS05835 PF03309 Type III pantothenate kinase D558_RS05840 PF00534 Glycosyl transferases group 1 D558_RS05840 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D558_RS05845 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D558_RS05850 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D558_RS05855 PF00483 Nucleotidyl transferase D558_RS05860 PF04321 RmlD substrate binding domain D558_RS05865 PF16363 GDP-mannose 4,6 dehydratase D558_RS05880 PF07690 Major Facilitator Superfamily D558_RS05890 PF13091 PLD-like domain D558_RS05895 PF03372 Endonuclease/Exonuclease/phosphatase family D558_RS05900 PF01336 OB-fold nucleic acid binding domain D558_RS05900 PF00152 tRNA synthetases class II (D, K and N) D558_RS05900 PF02938 GAD domain D558_RS05920 PF00732 GMC oxidoreductase D558_RS05920 PF05199 GMC oxidoreductase D558_RS05930 PF00701 Dihydrodipicolinate synthetase family D558_RS05935 PF13185 GAF domain D558_RS05940 PF00155 Aminotransferase class I and II D558_RS05945 PF01040 UbiA prenyltransferase family D558_RS05955 PF07729 FCD domain D558_RS05955 PF00392 Bacterial regulatory proteins, gntR family D558_RS05960 PF01274 Malate synthase D558_RS05965 PF00005 ABC transporter D558_RS05965 PF08402 TOBE domain D558_RS05980 PF00512 His Kinase A (phospho-acceptor) domain D558_RS05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS05985 PF00072 Response regulator receiver domain D558_RS05985 PF00486 Transcriptional regulatory protein, C terminal D558_RS05995 PF00132 Bacterial transferase hexapeptide (six repeats) D558_RS06005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D558_RS06010 PF02350 UDP-N-acetylglucosamine 2-epimerase D558_RS06020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D558_RS06025 PF02397 Bacterial sugar transferase D558_RS06045 PF01751 Toprim domain D558_RS06045 PF01131 DNA topoisomerase D558_RS06050 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS06050 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS06050 PF01610 Transposase D558_RS06060 PF00005 ABC transporter D558_RS06075 PF00171 Aldehyde dehydrogenase family D558_RS06080 PF13683 Integrase core domain D558_RS06080 PF13276 HTH-like domain D558_RS06085 PF01527 Transposase D558_RS06100 PF01037 Lrp/AsnC ligand binding domain D558_RS06105 PF01062 Bestrophin, RFP-TM, chloride channel D558_RS06115 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS06115 PF01610 Transposase D558_RS06115 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS06120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D558_RS06125 PF13683 Integrase core domain D558_RS06125 PF13276 HTH-like domain D558_RS06130 PF13276 HTH-like domain D558_RS06130 PF13683 Integrase core domain D558_RS06135 PF01527 Transposase D558_RS06145 PF00204 DNA gyrase B D558_RS06145 PF00986 DNA gyrase B subunit, carboxyl terminus D558_RS06145 PF18053 DNA gyrase B subunit insert domain D558_RS06145 PF01751 Toprim domain D558_RS06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS06150 PF02768 DNA polymerase III beta subunit, C-terminal domain D558_RS06150 PF02767 DNA polymerase III beta subunit, central domain D558_RS06150 PF00712 DNA polymerase III beta subunit, N-terminal domain D558_RS06160 PF00468 Ribosomal protein L34 D558_RS06165 PF00825 Ribonuclease P D558_RS06170 PF01809 Putative membrane protein insertion efficiency factor D558_RS06175 PF02096 60Kd inner membrane protein D558_RS06175 PF14849 YidC periplasmic domain D558_RS06180 PF00141 Peroxidase D558_RS06185 PF07687 Peptidase dimerisation domain D558_RS06185 PF01546 Peptidase family M20/M25/M40 D558_RS06190 PF00005 ABC transporter D558_RS06190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS06195 PF00005 ABC transporter D558_RS06195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS06200 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS06200 PF12911 N-terminal TM domain of oligopeptide transport permease C D558_RS06205 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS06210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D558_RS06215 PF01926 50S ribosome-binding GTPase D558_RS06215 PF10396 GTP-binding protein TrmE N-terminus D558_RS06215 PF12631 MnmE helical domain D558_RS06220 PF00326 Prolyl oligopeptidase family D558_RS06220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D558_RS06225 PF03466 LysR substrate binding domain D558_RS06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS06230 PF01515 Phosphate acetyl/butaryl transferase D558_RS06230 PF03949 Malic enzyme, NAD binding domain D558_RS06230 PF00390 Malic enzyme, N-terminal domain D558_RS06235 PF00072 Response regulator receiver domain D558_RS06235 PF00486 Transcriptional regulatory protein, C terminal D558_RS06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS06240 PF00512 His Kinase A (phospho-acceptor) domain D558_RS06260 PF00155 Aminotransferase class I and II D558_RS06265 PF00313 'Cold-shock' DNA-binding domain D558_RS06270 PF01134 Glucose inhibited division protein A D558_RS06270 PF13932 GidA associated domain D558_RS06275 PF02527 rRNA small subunit methyltransferase G D558_RS06280 PF13614 AAA domain D558_RS06285 PF02195 ParB-like nuclease domain D558_RS06285 PF17762 HTH domain found in ParB protein D558_RS06290 PF00710 Asparaginase, N-terminal D558_RS06290 PF17763 Glutaminase/Asparaginase C-terminal domain D558_RS06310 PF00009 Elongation factor Tu GTP binding domain D558_RS06310 PF03144 Elongation factor Tu domain 2 D558_RS06310 PF03143 Elongation factor Tu C-terminal domain D558_RS06320 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D558_RS06325 PF00467 KOW motif D558_RS06325 PF02357 Transcription termination factor nusG D558_RS06335 PF00687 Ribosomal protein L1p/L10e family D558_RS06340 PF00466 Ribosomal protein L10 D558_RS06345 PF16320 Ribosomal protein L7/L12 dimerisation domain D558_RS06345 PF00542 Ribosomal protein L7/L12 C-terminal domain D558_RS06350 PF10385 RNA polymerase beta subunit external 1 domain D558_RS06350 PF04565 RNA polymerase Rpb2, domain 3 D558_RS06350 PF00562 RNA polymerase Rpb2, domain 6 D558_RS06350 PF04561 RNA polymerase Rpb2, domain 2 D558_RS06350 PF04563 RNA polymerase beta subunit D558_RS06350 PF04560 RNA polymerase Rpb2, domain 7 D558_RS06355 PF05000 RNA polymerase Rpb1, domain 4 D558_RS06355 PF00623 RNA polymerase Rpb1, domain 2 D558_RS06355 PF04983 RNA polymerase Rpb1, domain 3 D558_RS06355 PF04998 RNA polymerase Rpb1, domain 5 D558_RS06355 PF04997 RNA polymerase Rpb1, domain 1 D558_RS06390 PF00164 Ribosomal protein S12/S23 D558_RS06395 PF00177 Ribosomal protein S7p/S5e D558_RS06400 PF03764 Elongation factor G, domain IV D558_RS06400 PF14492 Elongation Factor G, domain II D558_RS06400 PF00679 Elongation factor G C-terminus D558_RS06400 PF00009 Elongation factor Tu GTP binding domain D558_RS06400 PF03144 Elongation factor Tu domain 2 D558_RS06405 PF03143 Elongation factor Tu C-terminal domain D558_RS06405 PF03144 Elongation factor Tu domain 2 D558_RS06405 PF00009 Elongation factor Tu GTP binding domain D558_RS06410 PF00338 Ribosomal protein S10p/S20e D558_RS06415 PF00297 Ribosomal protein L3 D558_RS06420 PF00573 Ribosomal protein L4/L1 family D558_RS06425 PF00276 Ribosomal protein L23 D558_RS06430 PF03947 Ribosomal Proteins L2, C-terminal domain D558_RS06430 PF00181 Ribosomal Proteins L2, RNA binding domain D558_RS06435 PF00203 Ribosomal protein S19 D558_RS06440 PF00237 Ribosomal protein L22p/L17e D558_RS06445 PF07650 KH domain D558_RS06445 PF00189 Ribosomal protein S3, C-terminal domain D558_RS06450 PF00252 Ribosomal protein L16p/L10e D558_RS06455 PF00831 Ribosomal L29 protein D558_RS06460 PF00366 Ribosomal protein S17 D558_RS06470 PF11862 Domain of unknown function (DUF3382) D558_RS06470 PF02653 Branched-chain amino acid transport system / permease component D558_RS06475 PF00005 ABC transporter D558_RS06485 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS06485 PF00005 ABC transporter D558_RS06505 PF00171 Aldehyde dehydrogenase family D558_RS06515 PF00238 Ribosomal protein L14p/L23e D558_RS06520 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D558_RS06525 PF00281 Ribosomal protein L5 D558_RS06525 PF00673 ribosomal L5P family C-terminus D558_RS06530 PF00253 Ribosomal protein S14p/S29e D558_RS06535 PF00410 Ribosomal protein S8 D558_RS06540 PF00347 Ribosomal protein L6 D558_RS06545 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D558_RS06550 PF00333 Ribosomal protein S5, N-terminal domain D558_RS06550 PF03719 Ribosomal protein S5, C-terminal domain D558_RS06555 PF00327 Ribosomal protein L30p/L7e D558_RS06560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D558_RS06565 PF00344 SecY translocase D558_RS06570 PF01176 Translation initiation factor 1A / IF-1 D558_RS06575 PF00416 Ribosomal protein S13/S18 D558_RS06580 PF00411 Ribosomal protein S11 D558_RS06585 PF00163 Ribosomal protein S4/S9 N-terminal domain D558_RS06585 PF01479 S4 domain D558_RS06590 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D558_RS06590 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D558_RS06590 PF01000 RNA polymerase Rpb3/RpoA insert domain D558_RS06595 PF01196 Ribosomal protein L17 D558_RS06600 PF01230 HIT domain D558_RS06605 PF03091 CutA1 divalent ion tolerance protein D558_RS06610 PF02683 Cytochrome C biogenesis protein transmembrane region D558_RS06610 PF11412 Disulphide bond corrector protein DsbC D558_RS06620 PF00490 Delta-aminolevulinic acid dehydratase D558_RS06625 PF01926 50S ribosome-binding GTPase D558_RS06630 PF00034 Cytochrome c D558_RS06635 PF05140 ResB-like family D558_RS06640 PF01578 Cytochrome C assembly protein D558_RS06645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D558_RS06645 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D558_RS06650 PF01491 Frataxin-like domain D558_RS06655 PF17092 Penicillin-binding protein OB-like domain D558_RS06655 PF00912 Transglycosylase D558_RS06655 PF00905 Penicillin binding protein transpeptidase domain D558_RS06660 PF01202 Shikimate kinase D558_RS06665 PF01761 3-dehydroquinate synthase D558_RS06670 PF01966 HD domain D558_RS06670 PF13286 Phosphohydrolase-associated domain D558_RS06680 PF00043 Glutathione S-transferase, C-terminal domain D558_RS06680 PF13417 Glutathione S-transferase, N-terminal domain D558_RS06685 PF17755 UvrA DNA-binding domain D558_RS06685 PF17760 UvrA interaction domain D558_RS06690 PF07690 Major Facilitator Superfamily D558_RS06695 PF00436 Single-strand binding protein family D558_RS06700 PF01527 Transposase D558_RS06710 PF13276 HTH-like domain D558_RS06710 PF13683 Integrase core domain D558_RS06715 PF00733 Asparagine synthase D558_RS06715 PF13537 Glutamine amidotransferase domain D558_RS06755 PF04361 Protein of unknown function (DUF494) D558_RS06770 PF16868 NMT1-like family D558_RS06775 PF14031 Putative serine dehydratase domain D558_RS06775 PF01168 Alanine racemase, N-terminal domain D558_RS06780 PF00202 Aminotransferase class-III D558_RS06795 PF01039 Carboxyl transferase domain D558_RS06800 PF00108 Thiolase, N-terminal domain D558_RS06800 PF02803 Thiolase, C-terminal domain D558_RS06805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS06805 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS06805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS06810 PF09278 MerR, DNA binding D558_RS06810 PF00376 MerR family regulatory protein D558_RS06820 PF01810 LysE type translocator D558_RS06825 PF01053 Cys/Met metabolism PLP-dependent enzyme D558_RS06830 PF00563 EAL domain D558_RS06830 PF12792 CSS motif domain associated with EAL D558_RS06835 PF01323 DSBA-like thioredoxin domain D558_RS06835 PF00085 Thioredoxin D558_RS06845 PF05746 DALR anticodon binding domain D558_RS06845 PF03485 Arginyl tRNA synthetase N terminal domain D558_RS06845 PF00750 tRNA synthetases class I (R) D558_RS06860 PF01425 Amidase D558_RS06865 PF00682 HMGL-like D558_RS06865 PF08502 LeuA allosteric (dimerisation) domain D558_RS06875 PF04552 Sigma-54, DNA binding domain D558_RS06875 PF04963 Sigma-54 factor, core binding domain D558_RS06875 PF00309 Sigma-54 factor, Activator interacting domain (AID) D558_RS06885 PF00892 EamA-like transporter family D558_RS06890 PF00210 Ferritin-like domain D558_RS06900 PF00171 Aldehyde dehydrogenase family D558_RS06915 PF01883 Iron-sulfur cluster assembly protein D558_RS06925 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS06925 PF14759 Reductase C-terminal D558_RS06930 PF00355 Rieske [2Fe-2S] domain D558_RS06935 PF02332 Methane/Phenol/Toluene Hydroxylase D558_RS06950 PF02332 Methane/Phenol/Toluene Hydroxylase D558_RS06950 PF04945 YHS domain D558_RS06970 PF00043 Glutathione S-transferase, C-terminal domain D558_RS06970 PF02798 Glutathione S-transferase, N-terminal domain D558_RS06975 PF16925 Tetracyclin repressor-like, C-terminal domain D558_RS06975 PF00440 Bacterial regulatory proteins, tetR family D558_RS07005 PF03144 Elongation factor Tu domain 2 D558_RS07005 PF16658 Class II release factor RF3, C-terminal domain D558_RS07005 PF00009 Elongation factor Tu GTP binding domain D558_RS07010 PF01810 LysE type translocator D558_RS07015 PF00271 Helicase conserved C-terminal domain D558_RS07015 PF00270 DEAD/DEAH box helicase D558_RS07025 PF04536 TPM domain D558_RS07030 PF10396 GTP-binding protein TrmE N-terminus D558_RS07030 PF12631 MnmE helical domain D558_RS07030 PF01926 50S ribosome-binding GTPase D558_RS07035 PF11067 Protein of unknown function (DUF2868) D558_RS07050 PF01425 Amidase D558_RS07065 PF00043 Glutathione S-transferase, C-terminal domain D558_RS07065 PF02798 Glutathione S-transferase, N-terminal domain D558_RS07070 PF02167 Cytochrome C1 family D558_RS07075 PF00033 Cytochrome b/b6/petB D558_RS07075 PF00032 Cytochrome b(C-terminal)/b6/petD D558_RS07080 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D558_RS07080 PF00355 Rieske [2Fe-2S] domain D558_RS07085 PF01741 Large-conductance mechanosensitive channel, MscL D558_RS07090 PF01784 NIF3 (NGG1p interacting factor 3) D558_RS07095 PF13180 PDZ domain D558_RS07100 PF00902 Sec-independent protein translocase protein (TatC) D558_RS07110 PF02416 mttA/Hcf106 family D558_RS07120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D558_RS07125 PF01502 Phosphoribosyl-AMP cyclohydrolase D558_RS07130 PF00977 Histidine biosynthesis protein D558_RS07135 PF00977 Histidine biosynthesis protein D558_RS07140 PF00117 Glutamine amidotransferase class-I D558_RS07145 PF00475 Imidazoleglycerol-phosphate dehydratase D558_RS07150 PF00155 Aminotransferase class I and II D558_RS07155 PF00815 Histidinol dehydrogenase D558_RS07160 PF01634 ATP phosphoribosyltransferase D558_RS07165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D558_RS07170 PF01722 BolA-like protein D558_RS07175 PF01061 ABC-2 type transporter D558_RS07180 PF00005 ABC transporter D558_RS07190 PF04333 MlaA lipoprotein D558_RS07195 PF02470 MlaD protein D558_RS07200 PF02405 Permease MlaE D558_RS07205 PF00005 ABC transporter D558_RS07210 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS07215 PF03922 OmpW family D558_RS07220 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS07220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D558_RS07225 PF01645 Conserved region in glutamate synthase D558_RS07225 PF01493 GXGXG motif D558_RS07225 PF00310 Glutamine amidotransferases class-II D558_RS07225 PF04898 Glutamate synthase central domain D558_RS07230 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS07230 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS07230 PF01610 Transposase D558_RS07240 PF00107 Zinc-binding dehydrogenase D558_RS07240 PF08240 Alcohol dehydrogenase GroES-like domain D558_RS07245 PF00756 Putative esterase D558_RS07255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D558_RS07255 PF03625 Domain of unknown function DUF302 D558_RS07260 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS07260 PF01610 Transposase D558_RS07260 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS07265 PF04542 Sigma-70 region 2 D558_RS07265 PF00140 Sigma-70 factor, region 1.2 D558_RS07265 PF04545 Sigma-70, region 4 D558_RS07270 PF00149 Calcineurin-like phosphoesterase D558_RS07280 PF00293 NUDIX domain D558_RS07285 PF01527 Transposase D558_RS07290 PF13683 Integrase core domain D558_RS07290 PF13276 HTH-like domain D558_RS07295 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D558_RS07295 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D558_RS07310 PF00115 Cytochrome C and Quinol oxidase polypeptide I D558_RS07320 PF00510 Cytochrome c oxidase subunit III D558_RS07340 PF02628 Cytochrome oxidase assembly protein D558_RS07345 PF01040 UbiA prenyltransferase family D558_RS07350 PF02630 SCO1/SenC D558_RS07370 PF12804 MobA-like NTP transferase domain D558_RS07370 PF14602 Hexapeptide repeat of succinyl-transferase D558_RS07370 PF00132 Bacterial transferase hexapeptide (six repeats) D558_RS07375 PF07690 Major Facilitator Superfamily D558_RS07380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D558_RS07380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D558_RS07380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D558_RS07390 PF01037 Lrp/AsnC ligand binding domain D558_RS07395 PF01380 SIS domain D558_RS07430 PF03466 LysR substrate binding domain D558_RS07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS07435 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D558_RS07445 PF00701 Dihydrodipicolinate synthetase family D558_RS07450 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS07455 PF12411 Choline sulfatase enzyme C terminal D558_RS07455 PF00884 Sulfatase D558_RS07470 PF01527 Transposase D558_RS07475 PF13276 HTH-like domain D558_RS07475 PF13683 Integrase core domain D558_RS07480 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS07480 PF01610 Transposase D558_RS07480 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS07490 PF07969 Amidohydrolase family D558_RS07495 PF05995 Cysteine dioxygenase type I D558_RS07500 PF01070 FMN-dependent dehydrogenase D558_RS07505 PF00708 Acylphosphatase D558_RS07510 PF00440 Bacterial regulatory proteins, tetR family D558_RS07510 PF08361 MAATS-type transcriptional repressor, C-terminal region D558_RS07515 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS07525 PF09339 IclR helix-turn-helix domain D558_RS07525 PF01614 Bacterial transcriptional regulator D558_RS07535 PF13276 HTH-like domain D558_RS07535 PF13683 Integrase core domain D558_RS07540 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS07545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D558_RS07545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D558_RS07550 PF07470 Glycosyl Hydrolase Family 88 D558_RS07555 PF02515 CoA-transferase family III D558_RS07560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS07560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS07560 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS07565 PF02515 CoA-transferase family III D558_RS07570 PF00501 AMP-binding enzyme D558_RS07570 PF13193 AMP-binding enzyme C-terminal domain D558_RS07575 PF08361 MAATS-type transcriptional repressor, C-terminal region D558_RS07575 PF00440 Bacterial regulatory proteins, tetR family D558_RS07580 PF03466 LysR substrate binding domain D558_RS07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS07585 PF02627 Carboxymuconolactone decarboxylase family D558_RS07590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D558_RS07590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D558_RS07595 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS07600 PF03466 LysR substrate binding domain D558_RS07600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS07615 PF00920 Dehydratase family D558_RS07620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D558_RS07620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D558_RS07625 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS07625 PF14759 Reductase C-terminal D558_RS07635 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D558_RS07640 PF13609 Gram-negative porin D558_RS07645 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS07645 PF01610 Transposase D558_RS07645 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS07650 PF02548 Ketopantoate hydroxymethyltransferase D558_RS07655 PF00012 Hsp70 protein D558_RS07665 PF01610 Transposase D558_RS07665 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS07665 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS07675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D558_RS07675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D558_RS07675 PF02805 Metal binding domain of Ada D558_RS07675 PF12833 Helix-turn-helix domain D558_RS07680 PF13532 2OG-Fe(II) oxygenase superfamily D558_RS07690 PF04463 Protein of unknown function (DUF523) D558_RS07695 PF01494 FAD binding domain D558_RS07700 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS07705 PF01047 MarR family D558_RS07710 PF00005 ABC transporter D558_RS07715 PF01032 FecCD transport family D558_RS07720 PF01497 Periplasmic binding protein D558_RS07725 PF05171 Haemin-degrading HemS.ChuX domain D558_RS07735 PF16220 Domain of unknown function (DUF4880) D558_RS07735 PF04773 FecR protein D558_RS07760 PF03061 Thioesterase superfamily D558_RS07780 PF01568 Molydopterin dinucleotide binding domain D558_RS07780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D558_RS07780 PF00384 Molybdopterin oxidoreductase D558_RS07785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D558_RS07785 PF01568 Molydopterin dinucleotide binding domain D558_RS07785 PF00384 Molybdopterin oxidoreductase D558_RS07790 PF09163 Formate dehydrogenase N, transmembrane D558_RS07790 PF13247 4Fe-4S dicluster domain D558_RS07795 PF01292 Prokaryotic cytochrome b561 D558_RS07800 PF04216 Protein involved in formate dehydrogenase formation D558_RS07805 PF03841 L-seryl-tRNA selenium transferase D558_RS07805 PF12390 Selenocysteine synthase N terminal D558_RS07820 PF02769 AIR synthase related protein, C-terminal domain D558_RS07820 PF00586 AIR synthase related protein, N-terminal domain D558_RS07835 PF01323 DSBA-like thioredoxin domain D558_RS07845 PF00218 Indole-3-glycerol phosphate synthase D558_RS07850 PF00591 Glycosyl transferase family, a/b domain D558_RS07850 PF02885 Glycosyl transferase family, helical bundle domain D558_RS07855 PF00117 Glutamine amidotransferase class-I D558_RS07860 PF00425 chorismate binding enzyme D558_RS07860 PF04715 Anthranilate synthase component I, N terminal region D558_RS07865 PF13419 Haloacid dehalogenase-like hydrolase D558_RS07870 PF00834 Ribulose-phosphate 3 epimerase family D558_RS07875 PF04379 ApaG domain D558_RS07880 PF03562 MltA specific insert domain D558_RS07880 PF06725 3D domain D558_RS07885 PF01494 FAD binding domain D558_RS07890 PF10411 Disulfide bond isomerase protein N-terminus D558_RS07890 PF13098 Thioredoxin-like domain D558_RS07895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D558_RS07895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D558_RS07895 PF01842 ACT domain D558_RS07900 PF01171 PP-loop family D558_RS07910 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS07920 PF00378 Enoyl-CoA hydratase/isomerase D558_RS07935 PF00119 ATP synthase A chain D558_RS07940 PF00137 ATP synthase subunit C D558_RS07945 PF00430 ATP synthase B/B' CF(0) D558_RS07950 PF00213 ATP synthase delta (OSCP) subunit D558_RS07955 PF00306 ATP synthase alpha/beta chain, C terminal domain D558_RS07955 PF02874 ATP synthase alpha/beta family, beta-barrel domain D558_RS07955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D558_RS07960 PF00231 ATP synthase D558_RS07965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D558_RS07965 PF02874 ATP synthase alpha/beta family, beta-barrel domain D558_RS07995 PF13361 UvrD-like helicase C-terminal domain D558_RS07995 PF00580 UvrD/REP helicase N-terminal domain D558_RS08010 PF00005 ABC transporter D558_RS08010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS08015 PF00005 ABC transporter D558_RS08015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS08020 PF12911 N-terminal TM domain of oligopeptide transport permease C D558_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS08030 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D558_RS08045 PF01256 Carbohydrate kinase D558_RS08055 PF00378 Enoyl-CoA hydratase/isomerase D558_RS08060 PF03060 Nitronate monooxygenase D558_RS08070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS08070 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS08070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS08075 PF02515 CoA-transferase family III D558_RS08080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D558_RS08080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D558_RS08080 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain D558_RS08085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D558_RS08095 PF04262 Glutamate-cysteine ligase D558_RS08100 PF12146 Serine aminopeptidase, S33 D558_RS08100 PF12147 Putative methyltransferase D558_RS08120 PF02615 Malate/L-lactate dehydrogenase D558_RS08125 PF00561 alpha/beta hydrolase fold D558_RS08130 PF00561 alpha/beta hydrolase fold D558_RS08130 PF07021 Methionine biosynthesis protein MetW D558_RS08135 PF07690 Major Facilitator Superfamily D558_RS08140 PF13609 Gram-negative porin D558_RS08155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D558_RS08155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D558_RS08160 PF03372 Endonuclease/Exonuclease/phosphatase family D558_RS08165 PF00156 Phosphoribosyl transferase domain D558_RS08170 PF02934 GatB/GatE catalytic domain D558_RS08170 PF02637 GatB domain D558_RS08175 PF01425 Amidase D558_RS08190 PF04085 rod shape-determining protein MreC D558_RS08200 PF00905 Penicillin binding protein transpeptidase domain D558_RS08200 PF03717 Penicillin-binding Protein dimerisation domain D558_RS08205 PF01098 Cell cycle protein D558_RS08210 PF02615 Malate/L-lactate dehydrogenase D558_RS08215 PF00939 Sodium:sulfate symporter transmembrane region D558_RS08220 PF00440 Bacterial regulatory proteins, tetR family D558_RS08230 PF00696 Amino acid kinase family D558_RS08235 PF03180 NLPA lipoprotein D558_RS08240 PF00578 AhpC/TSA family D558_RS08245 PF04972 BON domain D558_RS08250 PF13580 SIS domain D558_RS08255 PF02021 Uncharacterised protein family UPF0102 D558_RS08260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D558_RS08265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D558_RS08265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D558_RS08270 PF05036 Sporulation related domain D558_RS08270 PF03330 Lytic transglycolase D558_RS08275 PF03668 P-loop ATPase protein family D558_RS08285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D558_RS08285 PF00034 Cytochrome c D558_RS08290 PF07475 HPr Serine kinase C-terminal domain D558_RS08290 PF02603 HPr Serine kinase N terminus D558_RS08295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D558_RS08300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D558_RS08305 PF03466 LysR substrate binding domain D558_RS08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS08310 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS08320 PF00005 ABC transporter D558_RS08340 PF00571 CBS domain D558_RS08340 PF01380 SIS domain D558_RS08345 PF02222 ATP-grasp domain D558_RS08350 PF07715 TonB-dependent Receptor Plug Domain D558_RS08350 PF00593 TonB dependent receptor D558_RS08360 PF01654 Cytochrome bd terminal oxidase subunit I D558_RS08365 PF02322 Cytochrome bd terminal oxidase subunit II D558_RS08370 PF08173 Membrane bound YbgT-like protein D558_RS08375 PF00664 ABC transporter transmembrane region D558_RS08375 PF00005 ABC transporter D558_RS08380 PF00005 ABC transporter D558_RS08380 PF00664 ABC transporter transmembrane region D558_RS08385 PF00156 Phosphoribosyl transferase domain D558_RS08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS08390 PF03466 LysR substrate binding domain D558_RS08400 PF00291 Pyridoxal-phosphate dependent enzyme D558_RS08400 PF00585 C-terminal regulatory domain of Threonine dehydratase D558_RS08405 PF09335 SNARE associated Golgi protein D558_RS08420 PF03746 LamB/YcsF family D558_RS08425 PF02626 Carboxyltransferase domain, subdomain A and B D558_RS08430 PF02682 Carboxyltransferase domain, subdomain C and D D558_RS08445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D558_RS08445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D558_RS08455 PF00072 Response regulator receiver domain D558_RS08455 PF00486 Transcriptional regulatory protein, C terminal D558_RS08460 PF01209 ubiE/COQ5 methyltransferase family D558_RS08480 PF01061 ABC-2 type transporter D558_RS08485 PF00005 ABC transporter D558_RS08495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D558_RS08495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D558_RS08525 PF02397 Bacterial sugar transferase D558_RS08530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D558_RS08540 PF03109 ABC1 family D558_RS08545 PF01527 Transposase D558_RS08550 PF13276 HTH-like domain D558_RS08550 PF13683 Integrase core domain D558_RS08560 PF01467 Cytidylyltransferase-like D558_RS08565 PF02321 Outer membrane efflux protein D558_RS08575 PF08543 Phosphomethylpyrimidine kinase D558_RS08580 PF05690 Thiazole biosynthesis protein ThiG D558_RS08585 PF01497 Periplasmic binding protein D558_RS08590 PF07715 TonB-dependent Receptor Plug Domain D558_RS08590 PF00593 TonB dependent receptor D558_RS08595 PF02310 B12 binding domain D558_RS08595 PF02965 Vitamin B12 dependent methionine synthase, activation domain D558_RS08595 PF02607 B12 binding domain D558_RS08595 PF00809 Pterin binding enzyme D558_RS08595 PF02574 Homocysteine S-methyltransferase D558_RS08600 PF08241 Methyltransferase domain D558_RS08610 PF14815 NUDIX domain D558_RS08610 PF00730 HhH-GPD superfamily base excision DNA repair protein D558_RS08610 PF00633 Helix-hairpin-helix motif D558_RS08610 PF10576 Iron-sulfur binding domain of endonuclease III D558_RS08620 PF03975 CheD chemotactic sensory transduction D558_RS08625 PF18075 FtsX extracellular domain D558_RS08630 PF00005 ABC transporter D558_RS08635 PF00497 Bacterial extracellular solute-binding proteins, family 3 D558_RS08640 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS08645 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS08650 PF00005 ABC transporter D558_RS08655 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS08665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D558_RS08665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D558_RS08675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D558_RS08675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D558_RS08690 PF02616 Segregation and condensation protein ScpA D558_RS08695 PF02569 Pantoate-beta-alanine ligase D558_RS08705 PF01478 Type IV leader peptidase family D558_RS08705 PF06750 Bacterial Peptidase A24 N-terminal domain D558_RS08710 PF01121 Dephospho-CoA kinase D558_RS08715 PF07072 Cell division protein D558_RS08720 PF13533 Biotin-lipoyl like D558_RS08725 PF00873 AcrB/AcrD/AcrF family D558_RS08730 PF00873 AcrB/AcrD/AcrF family D558_RS08735 PF02321 Outer membrane efflux protein D558_RS08740 PF16970 Type-1 fimbrial protein, A D558_RS08745 PF16970 Type-1 fimbrial protein, A D558_RS08760 PF01960 ArgJ family D558_RS08770 PF01047 MarR family D558_RS08785 PF02653 Branched-chain amino acid transport system / permease component D558_RS08795 PF00005 ABC transporter D558_RS08795 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS08800 PF00005 ABC transporter D558_RS08820 PF09345 Domain of unknown function (DUF1987) D558_RS08825 PF00990 Diguanylate cyclase, GGDEF domain D558_RS08835 PF00106 short chain dehydrogenase D558_RS08840 PF00378 Enoyl-CoA hydratase/isomerase D558_RS08845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS08845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS08845 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS08850 PF13193 AMP-binding enzyme C-terminal domain D558_RS08850 PF00501 AMP-binding enzyme D558_RS08870 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS08870 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS08870 PF01610 Transposase D558_RS08875 PF00202 Aminotransferase class-III D558_RS08885 PF08543 Phosphomethylpyrimidine kinase D558_RS08890 PF02622 Uncharacterized ACR, COG1678 D558_RS08895 PF03652 Holliday junction resolvase D558_RS08905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D558_RS08905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D558_RS08910 PF01979 Amidohydrolase family D558_RS08915 PF01979 Amidohydrolase family D558_RS08920 PF01553 Acyltransferase D558_RS08925 PF00149 Calcineurin-like phosphoesterase D558_RS08935 PF00912 Transglycosylase D558_RS08940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D558_RS08940 PF08501 Shikimate dehydrogenase substrate binding domain D558_RS08940 PF01488 Shikimate / quinate 5-dehydrogenase D558_RS08950 PF00773 RNB domain D558_RS08960 PF02875 Mur ligase family, glutamate ligase domain D558_RS08960 PF01225 Mur ligase family, catalytic domain D558_RS08960 PF08245 Mur ligase middle domain D558_RS08970 PF01220 Dehydroquinase class II D558_RS08975 PF00364 Biotin-requiring enzyme D558_RS08980 PF00289 Biotin carboxylase, N-terminal domain D558_RS08980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D558_RS08980 PF02785 Biotin carboxylase C-terminal domain D558_RS08995 PF00294 pfkB family carbohydrate kinase D558_RS09020 PF00501 AMP-binding enzyme D558_RS09020 PF13193 AMP-binding enzyme C-terminal domain D558_RS09035 PF00268 Ribonucleotide reductase, small chain D558_RS09040 PF02867 Ribonucleotide reductase, barrel domain D558_RS09040 PF00317 Ribonucleotide reductase, all-alpha domain D558_RS09040 PF03477 ATP cone domain D558_RS09065 PF01037 Lrp/AsnC ligand binding domain D558_RS09080 PF00749 tRNA synthetases class I (E and Q), catalytic domain D558_RS09085 PF00583 Acetyltransferase (GNAT) family D558_RS09085 PF13607 Succinyl-CoA ligase like flavodoxin domain D558_RS09085 PF13380 CoA binding domain D558_RS09090 PF00005 ABC transporter D558_RS09095 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS09095 PF00005 ABC transporter D558_RS09100 PF11862 Domain of unknown function (DUF3382) D558_RS09100 PF02653 Branched-chain amino acid transport system / permease component D558_RS09110 PF02653 Branched-chain amino acid transport system / permease component D558_RS09130 PF00171 Aldehyde dehydrogenase family D558_RS09140 PF01202 Shikimate kinase D558_RS09145 PF00378 Enoyl-CoA hydratase/isomerase D558_RS09155 PF00970 Oxidoreductase FAD-binding domain D558_RS09155 PF00175 Oxidoreductase NAD-binding domain D558_RS09155 PF00037 4Fe-4S binding domain D558_RS09160 PF02230 Phospholipase/Carboxylesterase D558_RS09165 PF04751 Protein of unknown function (DUF615) D558_RS09170 PF01523 Putative modulator of DNA gyrase D558_RS09175 PF00572 Ribosomal protein L13 D558_RS09180 PF00380 Ribosomal protein S9/S16 D558_RS09185 PF02774 Semialdehyde dehydrogenase, dimerisation domain D558_RS09185 PF01118 Semialdehyde dehydrogenase, NAD binding domain D558_RS09195 PF01521 Iron-sulphur cluster biosynthesis D558_RS09205 PF03702 Anhydro-N-acetylmuramic acid kinase D558_RS09210 PF01551 Peptidase family M23 D558_RS09210 PF01476 LysM domain D558_RS09215 PF00579 tRNA synthetases class I (W and Y) D558_RS09215 PF01479 S4 domain D558_RS09220 PF01161 Phosphatidylethanolamine-binding protein D558_RS09225 PF00464 Serine hydroxymethyltransferase D558_RS09230 PF03477 ATP cone domain D558_RS09235 PF01965 DJ-1/PfpI family D558_RS09245 PF01872 RibD C-terminal domain D558_RS09245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D558_RS09250 PF00677 Lumazine binding domain D558_RS09260 PF04285 Protein of unknown function (DUF444) D558_RS09265 PF04293 SpoVR like protein D558_RS09280 PF03466 LysR substrate binding domain D558_RS09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS09300 PF02627 Carboxymuconolactone decarboxylase family D558_RS09310 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS09310 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS09310 PF01610 Transposase D558_RS09320 PF00083 Sugar (and other) transporter D558_RS09320 PF08946 Osmosensory transporter coiled coil D558_RS09335 PF00206 Lyase D558_RS09335 PF14698 Argininosuccinate lyase C-terminal D558_RS09340 PF00582 Universal stress protein family D558_RS09350 PF00293 NUDIX domain D558_RS09350 PF09297 NADH pyrophosphatase zinc ribbon domain D558_RS09355 PF13360 PQQ-like domain D558_RS09375 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D558_RS09375 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D558_RS09380 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS09385 PF04391 Protein of unknown function (DUF533) D558_RS09390 PF00593 TonB dependent receptor D558_RS09390 PF07715 TonB-dependent Receptor Plug Domain D558_RS09405 PF01464 Transglycosylase SLT domain D558_RS09405 PF01476 LysM domain D558_RS09410 PF16123 Hydroxyacylglutathione hydrolase C-terminus D558_RS09410 PF00753 Metallo-beta-lactamase superfamily D558_RS09415 PF08241 Methyltransferase domain D558_RS09425 PF13533 Biotin-lipoyl like D558_RS09430 PF00873 AcrB/AcrD/AcrF family D558_RS09435 PF01610 Transposase D558_RS09435 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS09435 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS09445 PF00929 Exonuclease D558_RS09455 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS09455 PF01610 Transposase D558_RS09455 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS09460 PF13533 Biotin-lipoyl like D558_RS09465 PF00005 ABC transporter D558_RS09475 PF02321 Outer membrane efflux protein D558_RS09490 PF00535 Glycosyl transferase family 2 D558_RS09495 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase D558_RS09505 PF12146 Serine aminopeptidase, S33 D558_RS09515 PF00892 EamA-like transporter family D558_RS09520 PF00155 Aminotransferase class I and II D558_RS09520 PF00392 Bacterial regulatory proteins, gntR family D558_RS09530 PF00582 Universal stress protein family D558_RS09535 PF13683 Integrase core domain D558_RS09535 PF13276 HTH-like domain D558_RS09540 PF03144 Elongation factor Tu domain 2 D558_RS09540 PF00009 Elongation factor Tu GTP binding domain D558_RS09540 PF03764 Elongation factor G, domain IV D558_RS09540 PF14492 Elongation Factor G, domain II D558_RS09540 PF00679 Elongation factor G C-terminus D558_RS09565 PF00691 OmpA family D558_RS09570 PF07676 WD40-like Beta Propeller Repeat D558_RS09570 PF04052 TolB amino-terminal domain D558_RS09580 PF02472 Biopolymer transport protein ExbD/TolR D558_RS09585 PF01618 MotA/TolQ/ExbB proton channel family D558_RS09590 PF03061 Thioesterase superfamily D558_RS09595 PF04073 Aminoacyl-tRNA editing domain D558_RS09595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D558_RS09595 PF03129 Anticodon binding domain D558_RS09600 PF00293 NUDIX domain D558_RS09605 PF00486 Transcriptional regulatory protein, C terminal D558_RS09605 PF00072 Response regulator receiver domain D558_RS09610 PF00512 His Kinase A (phospho-acceptor) domain D558_RS09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS09625 PF01610 Transposase D558_RS09625 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS09625 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS09630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS09630 PF03466 LysR substrate binding domain D558_RS09635 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS09635 PF01610 Transposase D558_RS09635 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS09640 PF01610 Transposase D558_RS09640 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS09640 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS09645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D558_RS09645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D558_RS09650 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS09650 PF01610 Transposase D558_RS09650 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS09655 PF01970 Tripartite tricarboxylate transporter TctA family D558_RS09680 PF01790 Prolipoprotein diacylglyceryl transferase D558_RS09685 PF00034 Cytochrome c D558_RS09690 PF01625 Peptide methionine sulfoxide reductase D558_RS09695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D558_RS09700 PF01037 Lrp/AsnC ligand binding domain D558_RS09735 PF01527 Transposase D558_RS09740 PF13276 HTH-like domain D558_RS09740 PF13683 Integrase core domain D558_RS09755 PF01546 Peptidase family M20/M25/M40 D558_RS09755 PF07687 Peptidase dimerisation domain D558_RS09760 PF01979 Amidohydrolase family D558_RS09765 PF00005 ABC transporter D558_RS09765 PF16326 ABC transporter C-terminal domain D558_RS09765 PF12848 ABC transporter D558_RS09770 PF02381 MraZ protein, putative antitoxin-like D558_RS09780 PF04999 Cell division protein FtsL D558_RS09785 PF00905 Penicillin binding protein transpeptidase domain D558_RS09785 PF03717 Penicillin-binding Protein dimerisation domain D558_RS09790 PF08245 Mur ligase middle domain D558_RS09790 PF02875 Mur ligase family, glutamate ligase domain D558_RS09795 PF00953 Glycosyl transferase family 4 D558_RS09800 PF08245 Mur ligase middle domain D558_RS09800 PF02875 Mur ligase family, glutamate ligase domain D558_RS09805 PF01098 Cell cycle protein D558_RS09815 PF01225 Mur ligase family, catalytic domain D558_RS09815 PF02875 Mur ligase family, glutamate ligase domain D558_RS09815 PF08245 Mur ligase middle domain D558_RS09820 PF07478 D-ala D-ala ligase C-terminus D558_RS09820 PF01820 D-ala D-ala ligase N-terminus D558_RS09825 PF08478 POTRA domain, FtsQ-type D558_RS09825 PF03799 Cell division protein FtsQ D558_RS09830 PF02491 SHS2 domain inserted in FTSA D558_RS09840 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D558_RS09860 PF02810 SEC-C motif D558_RS09860 PF07517 SecA DEAD-like domain D558_RS09860 PF01043 SecA preprotein cross-linking domain D558_RS09860 PF07516 SecA Wing and Scaffold domain D558_RS09870 PF01610 Transposase D558_RS09870 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS09870 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS09875 PF13393 Histidyl-tRNA synthetase D558_RS09880 PF00709 Adenylosuccinate synthetase D558_RS09890 PF01165 Ribosomal protein S21 D558_RS09900 PF04545 Sigma-70, region 4 D558_RS09900 PF04546 Sigma-70, non-essential region D558_RS09900 PF03979 Sigma-70 factor, region 1.1 D558_RS09900 PF00140 Sigma-70 factor, region 1.2 D558_RS09900 PF04542 Sigma-70 region 2 D558_RS09900 PF04539 Sigma-70 region 3 D558_RS09910 PF01527 Transposase D558_RS09915 PF13683 Integrase core domain D558_RS09915 PF13276 HTH-like domain D558_RS09940 PF07238 PilZ domain D558_RS09940 PF07317 Flagellar regulator YcgR D558_RS09955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS09955 PF03466 LysR substrate binding domain D558_RS09965 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS09970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D558_RS09970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D558_RS09980 PF00781 Diacylglycerol kinase catalytic domain D558_RS09980 PF02142 MGS-like domain D558_RS09990 PF01569 PAP2 superfamily D558_RS10010 PF13609 Gram-negative porin D558_RS10015 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D558_RS10020 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D558_RS10025 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D558_RS10030 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D558_RS10040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D558_RS10040 PF10531 SLBB domain D558_RS10040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D558_RS10045 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D558_RS10045 PF00384 Molybdopterin oxidoreductase D558_RS10045 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D558_RS10055 PF12838 4Fe-4S dicluster domain D558_RS10060 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D558_RS10065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D558_RS10070 PF00361 Proton-conducting membrane transporter D558_RS10070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D558_RS10075 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D558_RS10075 PF00361 Proton-conducting membrane transporter D558_RS10080 PF00361 Proton-conducting membrane transporter D558_RS10100 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D558_RS10105 PF02542 YgbB family D558_RS10110 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10110 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10110 PF01610 Transposase D558_RS10115 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10115 PF01610 Transposase D558_RS10115 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10120 PF02627 Carboxymuconolactone decarboxylase family D558_RS10125 PF00578 AhpC/TSA family D558_RS10135 PF00486 Transcriptional regulatory protein, C terminal D558_RS10135 PF00072 Response regulator receiver domain D558_RS10150 PF03167 Uracil DNA glycosylase superfamily D558_RS10155 PF07690 Major Facilitator Superfamily D558_RS10160 PF06470 SMC proteins Flexible Hinge Domain D558_RS10160 PF02463 RecF/RecN/SMC N terminal domain D558_RS10170 PF00533 BRCA1 C Terminus (BRCT) domain D558_RS10170 PF01653 NAD-dependent DNA ligase adenylation domain D558_RS10170 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D558_RS10170 PF03120 NAD-dependent DNA ligase OB-fold domain D558_RS10170 PF12826 Helix-hairpin-helix motif D558_RS10175 PF00005 ABC transporter D558_RS10180 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS10185 PF00497 Bacterial extracellular solute-binding proteins, family 3 D558_RS10195 PF04279 Intracellular septation protein A D558_RS10200 PF01641 SelR domain D558_RS10205 PF00005 ABC transporter D558_RS10210 PF02361 Cobalt transport protein D558_RS10215 PF02632 BioY family D558_RS10230 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS10230 PF00005 ABC transporter D558_RS10235 PF00005 ABC transporter D558_RS10240 PF05506 Domain of unknown function (DUF756) D558_RS10240 PF04185 Phosphoesterase family D558_RS10245 PF01063 Amino-transferase class IV D558_RS10255 PF02653 Branched-chain amino acid transport system / permease component D558_RS10265 PF13683 Integrase core domain D558_RS10265 PF13276 HTH-like domain D558_RS10270 PF13276 HTH-like domain D558_RS10270 PF13683 Integrase core domain D558_RS10275 PF01527 Transposase D558_RS10280 PF00633 Helix-hairpin-helix motif D558_RS10280 PF00730 HhH-GPD superfamily base excision DNA repair protein D558_RS10280 PF10576 Iron-sulfur binding domain of endonuclease III D558_RS10285 PF04060 Putative Fe-S cluster D558_RS10295 PF00175 Oxidoreductase NAD-binding domain D558_RS10295 PF00970 Oxidoreductase FAD-binding domain D558_RS10300 PF00037 4Fe-4S binding domain D558_RS10300 PF11953 Domain of unknown function (DUF3470) D558_RS10305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D558_RS10305 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D558_RS10310 PF01042 Endoribonuclease L-PSP D558_RS10320 PF06167 Glucose-regulated metallo-peptidase M90 D558_RS10325 PF04607 Region found in RelA / SpoT proteins D558_RS10325 PF13291 ACT domain D558_RS10325 PF02824 TGS domain D558_RS10335 PF01546 Peptidase family M20/M25/M40 D558_RS10335 PF07687 Peptidase dimerisation domain D558_RS10340 PF00291 Pyridoxal-phosphate dependent enzyme D558_RS10345 PF00290 Tryptophan synthase alpha chain D558_RS10350 PF01039 Carboxyl transferase domain D558_RS10350 PF17848 Acetyl-coA carboxylase zinc finger domain D558_RS10355 PF09411 Lipid A 3-O-deacylase (PagL) D558_RS10360 PF01527 Transposase D558_RS10365 PF13276 HTH-like domain D558_RS10365 PF13683 Integrase core domain D558_RS10370 PF13683 Integrase core domain D558_RS10370 PF13276 HTH-like domain D558_RS10375 PF00575 S1 RNA binding domain D558_RS10375 PF12111 Polyribonucleotide phosphorylase C terminal D558_RS10375 PF10150 Ribonuclease E/G family D558_RS10380 PF00849 RNA pseudouridylate synthase D558_RS10380 PF01479 S4 domain D558_RS10385 PF13419 Haloacid dehalogenase-like hydrolase D558_RS10390 PF00174 Oxidoreductase molybdopterin binding domain D558_RS10395 PF01794 Ferric reductase like transmembrane component D558_RS10400 PF01510 N-acetylmuramoyl-L-alanine amidase D558_RS10405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D558_RS10410 PF02545 Maf-like protein D558_RS10415 PF02620 Large ribosomal RNA subunit accumulation protein YceD D558_RS10420 PF01783 Ribosomal L32p protein family D558_RS10425 PF02504 Fatty acid synthesis protein D558_RS10430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D558_RS10430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D558_RS10435 PF00698 Acyl transferase domain D558_RS10445 PF00550 Phosphopantetheine attachment site D558_RS10450 PF02801 Beta-ketoacyl synthase, C-terminal domain D558_RS10450 PF00109 Beta-ketoacyl synthase, N-terminal domain D558_RS10460 PF04542 Sigma-70 region 2 D558_RS10460 PF08281 Sigma-70, region 4 D558_RS10475 PF13180 PDZ domain D558_RS10480 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10480 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10480 PF01610 Transposase D558_RS10485 PF01527 Transposase D558_RS10490 PF13683 Integrase core domain D558_RS10490 PF13276 HTH-like domain D558_RS10495 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10495 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10495 PF01610 Transposase D558_RS10505 PF03144 Elongation factor Tu domain 2 D558_RS10505 PF00009 Elongation factor Tu GTP binding domain D558_RS10505 PF00679 Elongation factor G C-terminus D558_RS10505 PF06421 GTP-binding protein LepA C-terminus D558_RS10510 PF10502 Signal peptidase, peptidase S26 D558_RS10515 PF00035 Double-stranded RNA binding motif D558_RS10515 PF14622 Ribonuclease-III-like D558_RS10520 PF01926 50S ribosome-binding GTPase D558_RS10520 PF07650 KH domain D558_RS10525 PF11967 Recombination protein O N terminal D558_RS10525 PF02565 Recombination protein O C terminal D558_RS10530 PF00990 Diguanylate cyclase, GGDEF domain D558_RS10530 PF00072 Response regulator receiver domain D558_RS10535 PF01610 Transposase D558_RS10535 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10535 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10540 PF01027 Inhibitor of apoptosis-promoting Bax1 D558_RS10555 PF00883 Cytosol aminopeptidase family, catalytic domain D558_RS10555 PF02789 Cytosol aminopeptidase family, N-terminal domain D558_RS10575 PF00171 Aldehyde dehydrogenase family D558_RS10580 PF03466 LysR substrate binding domain D558_RS10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS10585 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10585 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10585 PF01610 Transposase D558_RS10595 PF00877 NlpC/P60 family D558_RS10605 PF03928 Haem-degrading D558_RS10620 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10620 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10620 PF01610 Transposase D558_RS10650 PF01144 Coenzyme A transferase D558_RS10655 PF01144 Coenzyme A transferase D558_RS10665 PF01112 Asparaginase D558_RS10670 PF00005 ABC transporter D558_RS10670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS10675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D558_RS10680 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS10685 PF12911 N-terminal TM domain of oligopeptide transport permease C D558_RS10685 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS10690 PF03576 Peptidase family S58 D558_RS10705 PF00117 Glutamine amidotransferase class-I D558_RS10705 PF06418 CTP synthase N-terminus D558_RS10720 PF04977 Septum formation initiator D558_RS10730 PF01430 Hsp33 protein D558_RS10735 PF00132 Bacterial transferase hexapeptide (six repeats) D558_RS10740 PF00501 AMP-binding enzyme D558_RS10740 PF13193 AMP-binding enzyme C-terminal domain D558_RS10740 PF16177 Acetyl-coenzyme A synthetase N-terminus D558_RS10745 PF00149 Calcineurin-like phosphoesterase D558_RS10755 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10755 PF01610 Transposase D558_RS10755 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10760 PF13276 HTH-like domain D558_RS10760 PF13683 Integrase core domain D558_RS10765 PF01527 Transposase D558_RS10770 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10770 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10770 PF01610 Transposase D558_RS10780 PF02926 THUMP domain D558_RS10780 PF01170 Putative RNA methylase family UPF0020 D558_RS10785 PF03653 Uncharacterised protein family (UPF0093) D558_RS10805 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D558_RS10805 PF00056 lactate/malate dehydrogenase, NAD binding domain D558_RS10810 PF07702 UTRA domain D558_RS10810 PF00392 Bacterial regulatory proteins, gntR family D558_RS10815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D558_RS10820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D558_RS10825 PF02910 Fumarate reductase flavoprotein C-term D558_RS10825 PF00890 FAD binding domain D558_RS10835 PF03937 Flavinator of succinate dehydrogenase D558_RS10845 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10845 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10845 PF01610 Transposase D558_RS10850 PF03466 LysR substrate binding domain D558_RS10850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS10855 PF08402 TOBE domain D558_RS10855 PF00005 ABC transporter D558_RS10865 PF13419 Haloacid dehalogenase-like hydrolase D558_RS10870 PF13419 Haloacid dehalogenase-like hydrolase D558_RS10880 PF01266 FAD dependent oxidoreductase D558_RS10890 PF13640 2OG-Fe(II) oxygenase superfamily D558_RS10890 PF18331 PKHD-type hydroxylase C-terminal domain D558_RS10900 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS10900 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS10900 PF01610 Transposase D558_RS10915 PF03169 OPT oligopeptide transporter protein D558_RS10920 PF16870 2-oxoglutarate dehydrogenase C-terminal D558_RS10920 PF02779 Transketolase, pyrimidine binding domain D558_RS10920 PF16078 2-oxoglutarate dehydrogenase N-terminus D558_RS10920 PF00676 Dehydrogenase E1 component D558_RS10930 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS10930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D558_RS10935 PF03969 AFG1-like ATPase D558_RS10940 PF04542 Sigma-70 region 2 D558_RS10940 PF08281 Sigma-70, region 4 D558_RS10950 PF00593 TonB dependent receptor D558_RS10950 PF07715 TonB-dependent Receptor Plug Domain D558_RS10970 PF00579 tRNA synthetases class I (W and Y) D558_RS10975 PF00575 S1 RNA binding domain D558_RS10975 PF16921 Tex protein YqgF-like domain D558_RS10975 PF09371 Tex-like protein N-terminal domain D558_RS10975 PF17674 HHH domain D558_RS10980 PF13307 Helicase C-terminal domain D558_RS10980 PF04851 Type III restriction enzyme, res subunit D558_RS10985 PF13525 Outer membrane lipoprotein D558_RS10990 PF01479 S4 domain D558_RS10990 PF00849 RNA pseudouridylate synthase D558_RS10995 PF02578 Multi-copper polyphenol oxidoreductase laccase D558_RS11000 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D558_RS11005 PF00106 short chain dehydrogenase D558_RS11010 PF05233 PHB accumulation regulatory domain D558_RS11010 PF07879 PHB/PHA accumulation regulator DNA-binding domain D558_RS11015 PF10634 Fe2+ transport protein D558_RS11025 PF03239 Iron permease FTR1 family D558_RS11035 PF02567 Phenazine biosynthesis-like protein D558_RS11040 PF04972 BON domain D558_RS11045 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11045 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11045 PF01610 Transposase D558_RS11055 PF05532 CsbD-like D558_RS11060 PF01292 Prokaryotic cytochrome b561 D558_RS11075 PF00005 ABC transporter D558_RS11075 PF00664 ABC transporter transmembrane region D558_RS11090 PF04305 Protein of unknown function (DUF455) D558_RS11095 PF13406 Transglycosylase SLT domain D558_RS11105 PF00990 Diguanylate cyclase, GGDEF domain D558_RS11105 PF00072 Response regulator receiver domain D558_RS11120 PF09335 SNARE associated Golgi protein D558_RS11125 PF00171 Aldehyde dehydrogenase family D558_RS11145 PF01610 Transposase D558_RS11145 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11145 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11150 PF01527 Transposase D558_RS11155 PF13276 HTH-like domain D558_RS11155 PF13683 Integrase core domain D558_RS11160 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11160 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11160 PF01610 Transposase D558_RS11165 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS11175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS11175 PF03466 LysR substrate binding domain D558_RS11180 PF07690 Major Facilitator Superfamily D558_RS11185 PF13419 Haloacid dehalogenase-like hydrolase D558_RS11195 PF00691 OmpA family D558_RS11200 PF03989 DNA gyrase C-terminal domain, beta-propeller D558_RS11200 PF00521 DNA gyrase/topoisomerase IV, subunit A D558_RS11205 PF00266 Aminotransferase class-V D558_RS11210 PF01842 ACT domain D558_RS11210 PF01817 Chorismate mutase type II D558_RS11210 PF00800 Prephenate dehydratase D558_RS11215 PF00155 Aminotransferase class I and II D558_RS11225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D558_RS11230 PF02224 Cytidylate kinase D558_RS11235 PF00575 S1 RNA binding domain D558_RS11240 PF00216 Bacterial DNA-binding protein D558_RS11250 PF18073 Rubredoxin metal binding domain D558_RS11255 PF00294 pfkB family carbohydrate kinase D558_RS11260 PF01370 NAD dependent epimerase/dehydratase family D558_RS11265 PF14579 Helix-hairpin-helix motif D558_RS11265 PF07733 Bacterial DNA polymerase III alpha NTPase domain D558_RS11265 PF02811 PHP domain D558_RS11265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D558_RS11270 PF00291 Pyridoxal-phosphate dependent enzyme D558_RS11275 PF13406 Transglycosylase SLT domain D558_RS11280 PF00850 Histone deacetylase domain D558_RS11285 PF01012 Electron transfer flavoprotein domain D558_RS11290 PF01012 Electron transfer flavoprotein domain D558_RS11290 PF00766 Electron transfer flavoprotein FAD-binding domain D558_RS11300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS11300 PF12806 Acetyl-CoA dehydrogenase C-terminal like D558_RS11300 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS11300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS11305 PF10417 C-terminal domain of 1-Cys peroxiredoxin D558_RS11305 PF00578 AhpC/TSA family D558_RS11315 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS11325 PF00005 ABC transporter D558_RS11325 PF17850 CysA C-terminal regulatory domain D558_RS11325 PF12857 TOBE-like domain D558_RS11330 PF01507 Phosphoadenosine phosphosulfate reductase family D558_RS11335 PF01507 Phosphoadenosine phosphosulfate reductase family D558_RS11340 PF00009 Elongation factor Tu GTP binding domain D558_RS11345 PF04055 Radical SAM superfamily D558_RS11355 PF01245 Ribosomal protein L19 D558_RS11360 PF01610 Transposase D558_RS11360 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11360 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11365 PF00293 NUDIX domain D558_RS11375 PF03193 RsgA GTPase D558_RS11380 PF01435 Peptidase family M48 D558_RS11385 PF00929 Exonuclease D558_RS11395 PF07848 PaaX-like protein D558_RS11395 PF08223 PaaX-like protein C-terminal domain D558_RS11400 PF05138 Phenylacetic acid catabolic protein D558_RS11405 PF06243 Phenylacetic acid degradation B D558_RS11410 PF05138 Phenylacetic acid catabolic protein D558_RS11415 PF01883 Iron-sulfur cluster assembly protein D558_RS11420 PF00970 Oxidoreductase FAD-binding domain D558_RS11420 PF00111 2Fe-2S iron-sulfur cluster binding domain D558_RS11420 PF00175 Oxidoreductase NAD-binding domain D558_RS11430 PF00378 Enoyl-CoA hydratase/isomerase D558_RS11435 PF03061 Thioesterase superfamily D558_RS11440 PF01610 Transposase D558_RS11440 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11440 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11455 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS11465 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D558_RS11465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D558_RS11485 PF01152 Bacterial-like globin D558_RS11495 PF13416 Bacterial extracellular solute-binding protein D558_RS11500 PF00005 ABC transporter D558_RS11500 PF08402 TOBE domain D558_RS11505 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS11510 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS11520 PF02245 Methylpurine-DNA glycosylase (MPG) D558_RS11530 PF02646 RmuC family D558_RS11540 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D558_RS11545 PF01895 PhoU domain D558_RS11550 PF04362 Bacterial Fe(2+) trafficking D558_RS11555 PF00583 Acetyltransferase (GNAT) family D558_RS11555 PF00696 Amino acid kinase family D558_RS11560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D558_RS11560 PF04408 Helicase associated domain (HA2) D558_RS11560 PF00270 DEAD/DEAH box helicase D558_RS11560 PF11898 Domain of unknown function (DUF3418) D558_RS11560 PF00271 Helicase conserved C-terminal domain D558_RS11570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D558_RS11570 PF07733 Bacterial DNA polymerase III alpha NTPase domain D558_RS11570 PF01336 OB-fold nucleic acid binding domain D558_RS11570 PF02811 PHP domain D558_RS11570 PF14579 Helix-hairpin-helix motif D558_RS11575 PF00534 Glycosyl transferases group 1 D558_RS11580 PF01522 Polysaccharide deacetylase D558_RS11585 PF00535 Glycosyl transferase family 2 D558_RS11615 PF00005 ABC transporter D558_RS11615 PF00664 ABC transporter transmembrane region D558_RS11620 PF01610 Transposase D558_RS11620 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11620 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11635 PF08240 Alcohol dehydrogenase GroES-like domain D558_RS11635 PF00107 Zinc-binding dehydrogenase D558_RS11640 PF01435 Peptidase family M48 D558_RS11650 PF00581 Rhodanese-like domain D558_RS11655 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11655 PF01610 Transposase D558_RS11655 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11675 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS11685 PF02609 Exonuclease VII small subunit D558_RS11690 PF00348 Polyprenyl synthetase D558_RS11700 PF02649 Type I GTP cyclohydrolase folE2 D558_RS11705 PF01250 Ribosomal protein S6 D558_RS11715 PF01084 Ribosomal protein S18 D558_RS11720 PF03948 Ribosomal protein L9, C-terminal domain D558_RS11720 PF01281 Ribosomal protein L9, N-terminal domain D558_RS11730 PF03796 DnaB-like helicase C terminal domain D558_RS11730 PF00772 DnaB-like helicase N terminal domain D558_RS11735 PF13593 SBF-like CPA transporter family (DUF4137) D558_RS11740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D558_RS11745 PF13638 PIN domain D558_RS11745 PF02562 PhoH-like protein D558_RS11750 PF00578 AhpC/TSA family D558_RS11755 PF04430 Protein of unknown function (DUF498/DUF598) D558_RS11760 PF00155 Aminotransferase class I and II D558_RS11765 PF03447 Homoserine dehydrogenase, NAD binding domain D558_RS11765 PF01842 ACT domain D558_RS11765 PF00742 Homoserine dehydrogenase D558_RS11770 PF00291 Pyridoxal-phosphate dependent enzyme D558_RS11770 PF14821 Threonine synthase N terminus D558_RS11775 PF01527 Transposase D558_RS11780 PF13683 Integrase core domain D558_RS11780 PF13276 HTH-like domain D558_RS11785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D558_RS11790 PF01433 Peptidase family M1 domain D558_RS11790 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D558_RS11790 PF11940 Domain of unknown function (DUF3458) Ig-like fold D558_RS11800 PF00816 H-NS histone family D558_RS11805 PF01523 Putative modulator of DNA gyrase D558_RS11810 PF00793 DAHP synthetase I family D558_RS11815 PF01610 Transposase D558_RS11815 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11815 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11825 PF13276 HTH-like domain D558_RS11825 PF13683 Integrase core domain D558_RS11830 PF01527 Transposase D558_RS11835 PF01565 FAD binding domain D558_RS11835 PF02913 FAD linked oxidases, C-terminal domain D558_RS11840 PF01565 FAD binding domain D558_RS11845 PF13183 4Fe-4S dicluster domain D558_RS11845 PF02754 Cysteine-rich domain D558_RS11855 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D558_RS11860 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D558_RS11860 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D558_RS11865 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS11865 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS11865 PF01610 Transposase D558_RS11875 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS11880 PF03466 LysR substrate binding domain D558_RS11895 PF00043 Glutathione S-transferase, C-terminal domain D558_RS11895 PF13417 Glutathione S-transferase, N-terminal domain D558_RS11900 PF08328 Adenylosuccinate lyase C-terminal D558_RS11900 PF00206 Lyase D558_RS11905 PF01322 Cytochrome C' D558_RS11915 PF13276 HTH-like domain D558_RS11915 PF13683 Integrase core domain D558_RS11930 PF01594 AI-2E family transporter D558_RS11940 PF00990 Diguanylate cyclase, GGDEF domain D558_RS11950 PF13683 Integrase core domain D558_RS11950 PF13276 HTH-like domain D558_RS11955 PF01527 Transposase D558_RS11960 PF13936 Helix-turn-helix domain D558_RS11960 PF00665 Integrase core domain D558_RS12000 PF01645 Conserved region in glutamate synthase D558_RS12005 PF04143 Sulphur transport D558_RS12010 PF02040 Arsenical pump membrane protein D558_RS12015 PF03547 Membrane transport protein D558_RS12020 PF13673 Acetyltransferase (GNAT) domain D558_RS12040 PF08206 Ribonuclease B OB domain D558_RS12040 PF00773 RNB domain D558_RS12040 PF00575 S1 RNA binding domain D558_RS12040 PF08461 Ribonuclease R winged-helix domain D558_RS12040 PF17876 Cold shock domain D558_RS12050 PF01053 Cys/Met metabolism PLP-dependent enzyme D558_RS12055 PF00216 Bacterial DNA-binding protein D558_RS12070 PF01618 MotA/TolQ/ExbB proton channel family D558_RS12075 PF02472 Biopolymer transport protein ExbD/TolR D558_RS12080 PF00072 Response regulator receiver domain D558_RS12080 PF00486 Transcriptional regulatory protein, C terminal D558_RS12085 PF00512 His Kinase A (phospho-acceptor) domain D558_RS12085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS12085 PF08521 Two-component sensor kinase N-terminal D558_RS12090 PF02705 K+ potassium transporter D558_RS12105 PF01527 Transposase D558_RS12110 PF13276 HTH-like domain D558_RS12110 PF13683 Integrase core domain D558_RS12115 PF00764 Arginosuccinate synthase D558_RS12120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D558_RS12120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D558_RS12125 PF00202 Aminotransferase class-III D558_RS12135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D558_RS12135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D558_RS12150 PF00392 Bacterial regulatory proteins, gntR family D558_RS12150 PF07729 FCD domain D558_RS12165 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS12165 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS12165 PF01610 Transposase D558_RS12180 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS12185 PF03328 HpcH/HpaI aldolase/citrate lyase family D558_RS12190 PF01649 Ribosomal protein S20 D558_RS12210 PF13276 HTH-like domain D558_RS12210 PF13683 Integrase core domain D558_RS12215 PF13683 Integrase core domain D558_RS12215 PF13276 HTH-like domain D558_RS12220 PF01527 Transposase D558_RS12225 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS12225 PF01610 Transposase D558_RS12225 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS12230 PF00034 Cytochrome c D558_RS12235 PF00732 GMC oxidoreductase D558_RS12235 PF05199 GMC oxidoreductase D558_RS12245 PF03023 Lipid II flippase MurJ D558_RS12250 PF00106 short chain dehydrogenase D558_RS12255 PF05191 Adenylate kinase, active site lid D558_RS12260 PF02348 Cytidylyltransferase D558_RS12265 PF03966 Trm112p-like protein D558_RS12270 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D558_RS12275 PF02472 Biopolymer transport protein ExbD/TolR D558_RS12280 PF01618 MotA/TolQ/ExbB proton channel family D558_RS12285 PF13742 OB-fold nucleic acid binding domain D558_RS12285 PF02601 Exonuclease VII, large subunit D558_RS12290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D558_RS12290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D558_RS12295 PF13276 HTH-like domain D558_RS12295 PF13683 Integrase core domain D558_RS12300 PF01527 Transposase D558_RS12310 PF02803 Thiolase, C-terminal domain D558_RS12310 PF00108 Thiolase, N-terminal domain D558_RS12320 PF00313 'Cold-shock' DNA-binding domain D558_RS12325 PF02617 ATP-dependent Clp protease adaptor protein ClpS D558_RS12335 PF01835 MG2 domain D558_RS12335 PF17962 Bacterial macroglobulin domain 6 D558_RS12335 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D558_RS12335 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D558_RS12335 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D558_RS12335 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D558_RS12335 PF07703 Alpha-2-macroglobulin bait region domain D558_RS12335 PF00207 Alpha-2-macroglobulin family D558_RS12340 PF00912 Transglycosylase D558_RS12340 PF00905 Penicillin binding protein transpeptidase domain D558_RS12340 PF06832 Penicillin-Binding Protein C-terminus Family D558_RS12345 PF00004 ATPase family associated with various cellular activities (AAA) D558_RS12345 PF07724 AAA domain (Cdc48 subfamily) D558_RS12345 PF17871 AAA lid domain D558_RS12345 PF10431 C-terminal, D2-small domain, of ClpB protein D558_RS12345 PF02861 Clp amino terminal domain, pathogenicity island component D558_RS12355 PF02470 MlaD protein D558_RS12365 PF01619 Proline dehydrogenase D558_RS12365 PF14850 DNA-binding domain of Proline dehydrogenase D558_RS12365 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D558_RS12365 PF00171 Aldehyde dehydrogenase family D558_RS12370 PF13458 Periplasmic binding protein D558_RS12380 PF02653 Branched-chain amino acid transport system / permease component D558_RS12380 PF11862 Domain of unknown function (DUF3382) D558_RS12385 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS12385 PF00005 ABC transporter D558_RS12390 PF00005 ABC transporter D558_RS12395 PF00909 Ammonium Transporter Family D558_RS12400 PF00543 Nitrogen regulatory protein P-II D558_RS12415 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS12415 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS12415 PF01610 Transposase D558_RS12420 PF04380 Membrane fusogenic activity D558_RS12425 PF01078 Magnesium chelatase, subunit ChlI D558_RS12425 PF13335 Magnesium chelatase, subunit ChlI C-terminal D558_RS12430 PF01632 Ribosomal protein L35 D558_RS12435 PF00453 Ribosomal protein L20 D558_RS12440 PF01409 tRNA synthetases class II core domain (F) D558_RS12440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D558_RS12445 PF01588 Putative tRNA binding domain D558_RS12445 PF03483 B3/4 domain D558_RS12445 PF03147 Ferredoxin-fold anticodon binding domain D558_RS12445 PF03484 tRNA synthetase B5 domain D558_RS12445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D558_RS12450 PF00216 Bacterial DNA-binding protein D558_RS12475 PF00392 Bacterial regulatory proteins, gntR family D558_RS12475 PF07729 FCD domain D558_RS12480 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS12485 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS12490 PF00180 Isocitrate/isopropylmalate dehydrogenase D558_RS12505 PF00313 'Cold-shock' DNA-binding domain D558_RS12515 PF02028 BCCT, betaine/carnitine/choline family transporter D558_RS12535 PF01037 Lrp/AsnC ligand binding domain D558_RS12590 PF00248 Aldo/keto reductase family D558_RS12595 PF01527 Transposase D558_RS12600 PF13276 HTH-like domain D558_RS12600 PF13683 Integrase core domain D558_RS12605 PF00248 Aldo/keto reductase family D558_RS12610 PF00248 Aldo/keto reductase family D558_RS12625 PF00149 Calcineurin-like phosphoesterase D558_RS12630 PF00905 Penicillin binding protein transpeptidase domain D558_RS12630 PF00912 Transglycosylase D558_RS12630 PF17092 Penicillin-binding protein OB-like domain D558_RS12635 PF00326 Prolyl oligopeptidase family D558_RS12650 PF11799 impB/mucB/samB family C-terminal domain D558_RS12650 PF00817 impB/mucB/samB family D558_RS12665 PF09424 Yqey-like protein D558_RS12670 PF00970 Oxidoreductase FAD-binding domain D558_RS12670 PF00042 Globin D558_RS12670 PF00175 Oxidoreductase NAD-binding domain D558_RS12675 PF02082 Transcriptional regulator D558_RS12680 PF01266 FAD dependent oxidoreductase D558_RS12685 PF05853 beta-keto acid cleavage enzyme D558_RS12690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D558_RS12690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D558_RS12695 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS12695 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS12695 PF01610 Transposase D558_RS12700 PF00501 AMP-binding enzyme D558_RS12700 PF13193 AMP-binding enzyme C-terminal domain D558_RS12715 PF00108 Thiolase, N-terminal domain D558_RS12715 PF02803 Thiolase, C-terminal domain D558_RS12720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D558_RS12720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D558_RS12720 PF00378 Enoyl-CoA hydratase/isomerase D558_RS12725 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D558_RS12730 PF00378 Enoyl-CoA hydratase/isomerase D558_RS12730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D558_RS12730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D558_RS12735 PF00108 Thiolase, N-terminal domain D558_RS12735 PF02803 Thiolase, C-terminal domain D558_RS12740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS12740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS12740 PF09317 Domain of unknown function (DUF1974) D558_RS12765 PF00459 Inositol monophosphatase family D558_RS12770 PF00171 Aldehyde dehydrogenase family D558_RS12790 PF13361 UvrD-like helicase C-terminal domain D558_RS12790 PF00580 UvrD/REP helicase N-terminal domain D558_RS12795 PF01544 CorA-like Mg2+ transporter protein D558_RS12805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D558_RS12810 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS12815 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS12815 PF12911 N-terminal TM domain of oligopeptide transport permease C D558_RS12820 PF00005 ABC transporter D558_RS12820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS12840 PF04172 LrgB-like family D558_RS12855 PF00210 Ferritin-like domain D558_RS12875 PF00072 Response regulator receiver domain D558_RS12880 PF06481 COX Aromatic Rich Motif D558_RS12880 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D558_RS12885 PF00115 Cytochrome C and Quinol oxidase polypeptide I D558_RS12890 PF00510 Cytochrome c oxidase subunit III D558_RS12895 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D558_RS12900 PF05726 Pirin C-terminal cupin domain D558_RS12900 PF02678 Pirin D558_RS12905 PF01527 Transposase D558_RS12910 PF13683 Integrase core domain D558_RS12910 PF13276 HTH-like domain D558_RS12915 PF13276 HTH-like domain D558_RS12915 PF13683 Integrase core domain D558_RS12920 PF05726 Pirin C-terminal cupin domain D558_RS12920 PF02678 Pirin D558_RS12930 PF13426 PAS domain D558_RS12930 PF08447 PAS fold D558_RS12930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D558_RS12945 PF04461 Protein of unknown function (DUF520) D558_RS12950 PF01425 Amidase D558_RS12960 PF04542 Sigma-70 region 2 D558_RS12960 PF08281 Sigma-70, region 4 D558_RS12975 PF00892 EamA-like transporter family D558_RS12980 PF00582 Universal stress protein family D558_RS13010 PF02634 FdhD/NarQ family D558_RS13020 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D558_RS13020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D558_RS13020 PF00037 4Fe-4S binding domain D558_RS13040 PF12804 MobA-like NTP transferase domain D558_RS13045 PF03454 MoeA C-terminal region (domain IV) D558_RS13045 PF00994 Probable molybdopterin binding domain D558_RS13045 PF03453 MoeA N-terminal region (domain I and II) D558_RS13050 PF00994 Probable molybdopterin binding domain D558_RS13055 PF02391 MoaE protein D558_RS13065 PF01967 MoaC family D558_RS13070 PF01738 Dienelactone hydrolase family D558_RS13080 PF08534 Redoxin D558_RS13095 PF00027 Cyclic nucleotide-binding domain D558_RS13095 PF13545 Crp-like helix-turn-helix domain D558_RS13100 PF01168 Alanine racemase, N-terminal domain D558_RS13100 PF14031 Putative serine dehydratase domain D558_RS13110 PF00258 Flavodoxin D558_RS13110 PF00175 Oxidoreductase NAD-binding domain D558_RS13110 PF00667 FAD binding domain D558_RS13115 PF02424 ApbE family D558_RS13140 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D558_RS13145 PF01593 Flavin containing amine oxidoreductase D558_RS13145 PF01593 Flavin containing amine oxidoreductase D558_RS13160 PF01168 Alanine racemase, N-terminal domain D558_RS13160 PF00842 Alanine racemase, C-terminal domain D558_RS13175 PF18073 Rubredoxin metal binding domain D558_RS13190 PF01554 MatE D558_RS13200 PF01197 Ribosomal protein L31 D558_RS13205 PF03301 Tryptophan 2,3-dioxygenase D558_RS13210 PF04199 Putative cyclase D558_RS13215 PF04002 RadC-like JAB domain D558_RS13225 PF02401 LytB protein D558_RS13230 PF14497 Glutathione S-transferase, C-terminal domain D558_RS13230 PF02798 Glutathione S-transferase, N-terminal domain D558_RS13260 PF03466 LysR substrate binding domain D558_RS13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS13270 PF04079 Segregation and condensation complex subunit ScpB D558_RS13275 PF00849 RNA pseudouridylate synthase D558_RS13275 PF01479 S4 domain D558_RS13280 PF17384 RimP C-terminal SH3 domain D558_RS13280 PF02576 RimP N-terminal domain D558_RS13285 PF08529 NusA N-terminal domain D558_RS13285 PF13184 NusA-like KH domain D558_RS13290 PF00009 Elongation factor Tu GTP binding domain D558_RS13290 PF04760 Translation initiation factor IF-2, N-terminal region D558_RS13290 PF08364 Bacterial translation initiation factor IF-2 associated region D558_RS13290 PF11987 Translation-initiation factor 2 D558_RS13295 PF02033 Ribosome-binding factor A D558_RS13300 PF01509 TruB family pseudouridylate synthase (N terminal domain) D558_RS13300 PF16198 tRNA pseudouridylate synthase B C-terminal domain D558_RS13305 PF03144 Elongation factor Tu domain 2 D558_RS13305 PF00009 Elongation factor Tu GTP binding domain D558_RS13305 PF00679 Elongation factor G C-terminus D558_RS13320 PF00392 Bacterial regulatory proteins, gntR family D558_RS13320 PF07729 FCD domain D558_RS13330 PF00378 Enoyl-CoA hydratase/isomerase D558_RS13335 PF00501 AMP-binding enzyme D558_RS13335 PF13193 AMP-binding enzyme C-terminal domain D558_RS13340 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS13345 PF00080 Copper/zinc superoxide dismutase (SODC) D558_RS13350 PF00248 Aldo/keto reductase family D558_RS13360 PF02653 Branched-chain amino acid transport system / permease component D558_RS13365 PF00005 ABC transporter D558_RS13375 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS13380 PF12857 TOBE-like domain D558_RS13380 PF00005 ABC transporter D558_RS13405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D558_RS13405 PF00529 HlyD membrane-fusion protein of T1SS D558_RS13410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D558_RS13410 PF00529 HlyD membrane-fusion protein of T1SS D558_RS13415 PF00873 AcrB/AcrD/AcrF family D558_RS13420 PF02321 Outer membrane efflux protein D558_RS13425 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D558_RS13430 PF01648 4'-phosphopantetheinyl transferase superfamily D558_RS13435 PF00933 Glycosyl hydrolase family 3 N terminal domain D558_RS13440 PF02151 UvrB/uvrC motif D558_RS13440 PF01541 GIY-YIG catalytic domain D558_RS13440 PF08459 UvrC Helix-hairpin-helix N-terminal D558_RS13445 PF01066 CDP-alcohol phosphatidyltransferase D558_RS13455 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D558_RS13455 PF14489 QueF-like protein D558_RS13460 PF00463 Isocitrate lyase family D558_RS13465 PF01047 MarR family D558_RS13470 PF02566 OsmC-like protein D558_RS13475 PF00005 ABC transporter D558_RS13480 PF01061 ABC-2 type transporter D558_RS13485 PF01594 AI-2E family transporter D558_RS13490 PF00990 Diguanylate cyclase, GGDEF domain D558_RS13490 PF03707 Bacterial signalling protein N terminal repeat D558_RS13490 PF00563 EAL domain D558_RS13500 PF01958 Domain of unknown function DUF108 D558_RS13500 PF03447 Homoserine dehydrogenase, NAD binding domain D558_RS13505 PF03466 LysR substrate binding domain D558_RS13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS13530 PF04170 NlpE N-terminal domain D558_RS13530 PF17185 NlpE C-terminal OB domain D558_RS13540 PF12843 Putative quorum-sensing-regulated virulence factor D558_RS13555 PF00293 NUDIX domain D558_RS13570 PF06968 Biotin and Thiamin Synthesis associated domain D558_RS13570 PF04055 Radical SAM superfamily D558_RS13595 PF04055 Radical SAM superfamily D558_RS13595 PF00919 Uncharacterized protein family UPF0004 D558_RS13595 PF01938 TRAM domain D558_RS13600 PF02562 PhoH-like protein D558_RS13610 PF00571 CBS domain D558_RS13610 PF03471 Transporter associated domain D558_RS13615 PF00795 Carbon-nitrogen hydrolase D558_RS13620 PF00248 Aldo/keto reductase family D558_RS13640 PF07549 SecD/SecF GG Motif D558_RS13640 PF02355 Protein export membrane protein D558_RS13645 PF13721 SecD export protein N-terminal TM region D558_RS13645 PF07549 SecD/SecF GG Motif D558_RS13645 PF02355 Protein export membrane protein D558_RS13650 PF02699 Preprotein translocase subunit D558_RS13665 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D558_RS13675 PF10414 Sirohaem synthase dimerisation region D558_RS13675 PF14824 Sirohaem biosynthesis protein central D558_RS13675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D558_RS13685 PF05957 Bacterial protein of unknown function (DUF883) D558_RS13700 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS13700 PF01610 Transposase D558_RS13700 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS13710 PF01464 Transglycosylase SLT domain D558_RS13710 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D558_RS13725 PF01515 Phosphate acetyl/butaryl transferase D558_RS13725 PF03949 Malic enzyme, NAD binding domain D558_RS13725 PF00390 Malic enzyme, N-terminal domain D558_RS13740 PF04452 RNA methyltransferase D558_RS13745 PF02779 Transketolase, pyrimidine binding domain D558_RS13745 PF02780 Transketolase, C-terminal domain D558_RS13745 PF00456 Transketolase, thiamine diphosphate binding domain D558_RS13750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D558_RS13750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D558_RS13755 PF00162 Phosphoglycerate kinase D558_RS13760 PF01740 STAS domain D558_RS13760 PF00916 Sulfate permease family D558_RS13775 PF00871 Acetokinase family D558_RS13780 PF01515 Phosphate acetyl/butaryl transferase D558_RS13790 PF02798 Glutathione S-transferase, N-terminal domain D558_RS13790 PF14834 Glutathione S-transferase, C-terminal domain D558_RS13805 PF01556 DnaJ C terminal domain D558_RS13805 PF00226 DnaJ domain D558_RS13825 PF01384 Phosphate transporter family D558_RS13830 PF00994 Probable molybdopterin binding domain D558_RS13840 PF01551 Peptidase family M23 D558_RS13840 PF08525 Opacity-associated protein A N-terminal motif D558_RS13840 PF01476 LysM domain D558_RS13850 PF01176 Translation initiation factor 1A / IF-1 D558_RS13870 PF01970 Tripartite tricarboxylate transporter TctA family D558_RS13875 PF13276 HTH-like domain D558_RS13875 PF13683 Integrase core domain D558_RS13880 PF13276 HTH-like domain D558_RS13880 PF13683 Integrase core domain D558_RS13885 PF01527 Transposase D558_RS13890 PF01970 Tripartite tricarboxylate transporter TctA family D558_RS13900 PF00583 Acetyltransferase (GNAT) family D558_RS13905 PF00375 Sodium:dicarboxylate symporter family D558_RS13910 PF01116 Fructose-bisphosphate aldolase class-II D558_RS13915 PF01259 SAICAR synthetase D558_RS13920 PF00731 AIR carboxylase D558_RS13925 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D558_RS13925 PF02222 ATP-grasp domain D558_RS13930 PF03481 Putative GTP-binding controlling metal-binding D558_RS13930 PF01300 Telomere recombination D558_RS13940 PF07715 TonB-dependent Receptor Plug Domain D558_RS13940 PF00593 TonB dependent receptor D558_RS13960 PF00596 Class II Aldolase and Adducin N-terminal domain D558_RS13965 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS13970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS13970 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS13970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS13985 PF02899 Phage integrase, N-terminal SAM-like domain D558_RS13985 PF00589 Phage integrase family D558_RS13990 PF04073 Aminoacyl-tRNA editing domain D558_RS13995 PF00768 D-alanyl-D-alanine carboxypeptidase D558_RS14010 PF00083 Sugar (and other) transporter D558_RS14020 PF12705 PD-(D/E)XK nuclease superfamily D558_RS14020 PF13361 UvrD-like helicase C-terminal domain D558_RS14020 PF00580 UvrD/REP helicase N-terminal domain D558_RS14030 PF02575 YbaB/EbfC DNA-binding family D558_RS14035 PF13662 Toprim domain D558_RS14035 PF02132 RecR protein D558_RS14050 PF00005 ABC transporter D558_RS14055 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS14060 PF00923 Transaldolase/Fructose-6-phosphate aldolase D558_RS14065 PF00117 Glutamine amidotransferase class-I D558_RS14065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D558_RS14070 PF02142 MGS-like domain D558_RS14070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D558_RS14070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D558_RS14085 PF00300 Histidine phosphatase superfamily (branch 1) D558_RS14090 PF03466 LysR substrate binding domain D558_RS14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS14100 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS14115 PF00860 Permease family D558_RS14120 PF01381 Helix-turn-helix D558_RS14125 PF01610 Transposase D558_RS14125 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS14125 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS14130 PF01272 Transcription elongation factor, GreA/GreB, C-term D558_RS14130 PF03449 Transcription elongation factor, N-terminal D558_RS14135 PF01985 CRS1 / YhbY (CRM) domain D558_RS14140 PF01728 FtsJ-like methyltransferase D558_RS14145 PF01434 Peptidase family M41 D558_RS14145 PF06480 FtsH Extracellular D558_RS14145 PF00004 ATPase family associated with various cellular activities (AAA) D558_RS14145 PF17862 AAA+ lid domain D558_RS14150 PF00809 Pterin binding enzyme D558_RS14155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D558_RS14155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D558_RS14155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D558_RS14155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D558_RS14165 PF02541 Ppx/GppA phosphatase family D558_RS14170 PF13090 Polyphosphate kinase C-terminal domain 2 D558_RS14170 PF17941 Polyphosphate kinase C-terminal domain 1 D558_RS14170 PF02503 Polyphosphate kinase middle domain D558_RS14170 PF13089 Polyphosphate kinase N-terminal domain D558_RS14175 PF12849 PBP superfamily domain D558_RS14180 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS14185 PF00005 ABC transporter D558_RS14200 PF01527 Transposase D558_RS14210 PF01695 IstB-like ATP binding protein D558_RS14215 PF00665 Integrase core domain D558_RS14215 PF02796 Helix-turn-helix domain of resolvase D558_RS14220 PF01527 Transposase D558_RS14230 PF01527 Transposase D558_RS14235 PF13683 Integrase core domain D558_RS14235 PF13276 HTH-like domain D558_RS14255 PF00392 Bacterial regulatory proteins, gntR family D558_RS14255 PF00155 Aminotransferase class I and II D558_RS14290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D558_RS14290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D558_RS14295 PF04381 Putative exonuclease, RdgC D558_RS14305 PF00083 Sugar (and other) transporter D558_RS14305 PF08946 Osmosensory transporter coiled coil D558_RS14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS14310 PF00512 His Kinase A (phospho-acceptor) domain D558_RS14315 PF00072 Response regulator receiver domain D558_RS14315 PF00486 Transcriptional regulatory protein, C terminal D558_RS14320 PF00154 recA bacterial DNA recombination protein D558_RS14325 PF02631 RecX family D558_RS14330 PF03466 LysR substrate binding domain D558_RS14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS14335 PF08267 Cobalamin-independent synthase, N-terminal domain D558_RS14335 PF01717 Cobalamin-independent synthase, Catalytic domain D558_RS14340 PF01610 Transposase D558_RS14340 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS14340 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS14350 PF08442 ATP-grasp domain D558_RS14350 PF00549 CoA-ligase D558_RS14355 PF00549 CoA-ligase D558_RS14355 PF02629 CoA binding domain D558_RS14360 PF03741 Integral membrane protein TerC family D558_RS14365 PF03741 Integral membrane protein TerC family D558_RS14395 PF00719 Inorganic pyrophosphatase D558_RS14400 PF01557 Fumarylacetoacetate (FAA) hydrolase family D558_RS14415 PF00004 ATPase family associated with various cellular activities (AAA) D558_RS14415 PF05362 Lon protease (S16) C-terminal proteolytic domain D558_RS14415 PF02190 ATP-dependent protease La (LON) substrate-binding domain D558_RS14460 PF00263 Bacterial type II and III secretion system protein D558_RS14460 PF03958 Bacterial type II/III secretion system short domain D558_RS14470 PF01527 Transposase D558_RS14475 PF13683 Integrase core domain D558_RS14475 PF13276 HTH-like domain D558_RS14480 PF00437 Type II/IV secretion system protein D558_RS14500 PF01636 Phosphotransferase enzyme family D558_RS14505 PF01207 Dihydrouridine synthase (Dus) D558_RS14515 PF03631 Virulence factor BrkB D558_RS14525 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D558_RS14530 PF00072 Response regulator receiver domain D558_RS14530 PF00486 Transcriptional regulatory protein, C terminal D558_RS14535 PF00672 HAMP domain D558_RS14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS14535 PF00512 His Kinase A (phospho-acceptor) domain D558_RS14540 PF03707 Bacterial signalling protein N terminal repeat D558_RS14540 PF00990 Diguanylate cyclase, GGDEF domain D558_RS14540 PF00563 EAL domain D558_RS14545 PF01264 Chorismate synthase D558_RS14550 PF01435 Peptidase family M48 D558_RS14555 PF00196 Bacterial regulatory proteins, luxR family D558_RS14555 PF00072 Response regulator receiver domain D558_RS14560 PF13683 Integrase core domain D558_RS14560 PF13276 HTH-like domain D558_RS14565 PF13276 HTH-like domain D558_RS14565 PF13683 Integrase core domain D558_RS14570 PF01527 Transposase D558_RS14580 PF00330 Aconitase family (aconitate hydratase) D558_RS14585 PF00694 Aconitase C-terminal domain D558_RS14590 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS14590 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS14590 PF01610 Transposase D558_RS14595 PF00180 Isocitrate/isopropylmalate dehydrogenase D558_RS14600 PF02774 Semialdehyde dehydrogenase, dimerisation domain D558_RS14600 PF01118 Semialdehyde dehydrogenase, NAD binding domain D558_RS14610 PF01416 tRNA pseudouridine synthase D558_RS14615 PF03480 Bacterial extracellular solute-binding protein, family 7 D558_RS14620 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D558_RS14630 PF13276 HTH-like domain D558_RS14630 PF00665 Integrase core domain D558_RS14630 PF13333 Integrase core domain D558_RS14635 PF01527 Transposase D558_RS14640 PF13276 HTH-like domain D558_RS14640 PF13683 Integrase core domain D558_RS14645 PF01527 Transposase D558_RS14660 PF04055 Radical SAM superfamily D558_RS14660 PF06969 HemN C-terminal domain D558_RS14665 PF00196 Bacterial regulatory proteins, luxR family D558_RS14665 PF00072 Response regulator receiver domain D558_RS14670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D558_RS14670 PF02824 TGS domain D558_RS14670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D558_RS14670 PF03129 Anticodon binding domain D558_RS14675 PF05198 Translation initiation factor IF-3, N-terminal domain D558_RS14675 PF00707 Translation initiation factor IF-3, C-terminal domain D558_RS14680 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D558_RS14680 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D558_RS14690 PF00381 PTS HPr component phosphorylation site D558_RS14695 PF00391 PEP-utilising enzyme, mobile domain D558_RS14695 PF02896 PEP-utilising enzyme, TIM barrel domain D558_RS14695 PF05524 PEP-utilising enzyme, N-terminal D558_RS14705 PF02566 OsmC-like protein D558_RS14720 PF00497 Bacterial extracellular solute-binding proteins, family 3 D558_RS14725 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS14730 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS14740 PF00692 dUTPase D558_RS14770 PF03575 Peptidase family S51 D558_RS14775 PF01037 Lrp/AsnC ligand binding domain D558_RS14785 PF01527 Transposase D558_RS14790 PF13683 Integrase core domain D558_RS14790 PF13276 HTH-like domain D558_RS14795 PF13276 HTH-like domain D558_RS14795 PF13683 Integrase core domain D558_RS14800 PF04127 DNA / pantothenate metabolism flavoprotein D558_RS14800 PF02441 Flavoprotein D558_RS14805 PF01252 Signal peptidase (SPase) II D558_RS14810 PF08264 Anticodon-binding domain of tRNA D558_RS14810 PF00133 tRNA synthetases class I (I, L, M and V) D558_RS14810 PF06827 Zinc finger found in FPG and IleRS D558_RS14815 PF06574 FAD synthetase D558_RS14815 PF01687 Riboflavin kinase D558_RS14825 PF01029 NusB family D558_RS14825 PF01189 16S rRNA methyltransferase RsmB/F D558_RS14835 PF01527 Transposase D558_RS14840 PF13276 HTH-like domain D558_RS14840 PF13683 Integrase core domain D558_RS14850 PF00580 UvrD/REP helicase N-terminal domain D558_RS14850 PF13361 UvrD-like helicase C-terminal domain D558_RS14855 PF07715 TonB-dependent Receptor Plug Domain D558_RS14860 PF00005 ABC transporter D558_RS14860 PF12848 ABC transporter D558_RS14865 PF05175 Methyltransferase small domain D558_RS14875 PF00132 Bacterial transferase hexapeptide (six repeats) D558_RS14875 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D558_RS14875 PF14602 Hexapeptide repeat of succinyl-transferase D558_RS14880 PF00155 Aminotransferase class I and II D558_RS14900 PF01527 Transposase D558_RS14910 PF01527 Transposase D558_RS14915 PF01695 IstB-like ATP binding protein D558_RS14920 PF02796 Helix-turn-helix domain of resolvase D558_RS14920 PF00665 Integrase core domain D558_RS14925 PF13276 HTH-like domain D558_RS14925 PF13683 Integrase core domain D558_RS14940 PF01527 Transposase D558_RS14945 PF13683 Integrase core domain D558_RS14945 PF13276 HTH-like domain D558_RS14965 PF04185 Phosphoesterase family D558_RS14965 PF05506 Domain of unknown function (DUF756) D558_RS14975 PF01610 Transposase D558_RS14975 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS14975 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS14980 PF03466 LysR substrate binding domain D558_RS14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS14995 PF00795 Carbon-nitrogen hydrolase D558_RS15000 PF04102 SlyX D558_RS15010 PF00583 Acetyltransferase (GNAT) family D558_RS15015 PF05698 Bacterial trigger factor protein (TF) C-terminus D558_RS15035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D558_RS15035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D558_RS15040 PF00990 Diguanylate cyclase, GGDEF domain D558_RS15040 PF03707 Bacterial signalling protein N terminal repeat D558_RS15040 PF00563 EAL domain D558_RS15045 PF01557 Fumarylacetoacetate (FAA) hydrolase family D558_RS15060 PF00444 Ribosomal protein L36 D558_RS15065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS15065 PF03466 LysR substrate binding domain D558_RS15075 PF00005 ABC transporter D558_RS15100 PF02817 e3 binding domain D558_RS15100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D558_RS15100 PF00364 Biotin-requiring enzyme D558_RS15105 PF17831 Pyruvate dehydrogenase E1 component middle domain D558_RS15105 PF00456 Transketolase, thiamine diphosphate binding domain D558_RS15110 PF00512 His Kinase A (phospho-acceptor) domain D558_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS15110 PF00989 PAS fold D558_RS15115 PF00072 Response regulator receiver domain D558_RS15115 PF00196 Bacterial regulatory proteins, luxR family D558_RS15120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D558_RS15120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D558_RS15125 PF01432 Peptidase family M3 D558_RS15140 PF02630 SCO1/SenC D558_RS15150 PF02321 Outer membrane efflux protein D558_RS15155 PF00873 AcrB/AcrD/AcrF family D558_RS15160 PF00529 HlyD membrane-fusion protein of T1SS D558_RS15160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D558_RS15165 PF03466 LysR substrate binding domain D558_RS15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS15170 PF00849 RNA pseudouridylate synthase D558_RS15170 PF01479 S4 domain D558_RS15175 PF04345 Chorismate lyase D558_RS15180 PF07690 Major Facilitator Superfamily D558_RS15185 PF07152 YaeQ protein D558_RS15190 PF01810 LysE type translocator D558_RS15195 PF01610 Transposase D558_RS15195 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS15195 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS15200 PF13458 Periplasmic binding protein D558_RS15205 PF00005 ABC transporter D558_RS15210 PF01610 Transposase D558_RS15210 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS15210 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS15215 PF00005 ABC transporter D558_RS15215 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS15225 PF11862 Domain of unknown function (DUF3382) D558_RS15225 PF02653 Branched-chain amino acid transport system / permease component D558_RS15230 PF02653 Branched-chain amino acid transport system / permease component D558_RS15235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS15235 PF03466 LysR substrate binding domain D558_RS15245 PF00291 Pyridoxal-phosphate dependent enzyme D558_RS15245 PF13291 ACT domain D558_RS15255 PF00291 Pyridoxal-phosphate dependent enzyme D558_RS15265 PF00575 S1 RNA binding domain D558_RS15265 PF01138 3' exoribonuclease family, domain 1 D558_RS15265 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D558_RS15265 PF00013 KH domain D558_RS15265 PF03725 3' exoribonuclease family, domain 2 D558_RS15270 PF00312 Ribosomal protein S15 D558_RS15285 PF01066 CDP-alcohol phosphatidyltransferase D558_RS15290 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D558_RS15290 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D558_RS15295 PF10369 Small subunit of acetolactate synthase D558_RS15300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D558_RS15300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D558_RS15300 PF00205 Thiamine pyrophosphate enzyme, central domain D558_RS15335 PF00106 short chain dehydrogenase D558_RS15350 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D558_RS15360 PF04183 IucA / IucC family D558_RS15360 PF06276 Ferric iron reductase FhuF-like transporter D558_RS15380 PF07690 Major Facilitator Superfamily D558_RS15390 PF01914 MarC family integral membrane protein D558_RS15400 PF13276 HTH-like domain D558_RS15400 PF13683 Integrase core domain D558_RS15405 PF13276 HTH-like domain D558_RS15405 PF13683 Integrase core domain D558_RS15410 PF01527 Transposase D558_RS15420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D558_RS15420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D558_RS15435 PF07715 TonB-dependent Receptor Plug Domain D558_RS15435 PF00593 TonB dependent receptor D558_RS15445 PF00593 TonB dependent receptor D558_RS15445 PF07715 TonB-dependent Receptor Plug Domain D558_RS15450 PF02308 MgtC family D558_RS15455 PF04286 Protein of unknown function (DUF445) D558_RS15465 PF08774 VRR-NUC domain D558_RS15465 PF18081 Fanconi anemia-associated nuclease SAP domain D558_RS15475 PF02735 Ku70/Ku80 beta-barrel domain D558_RS15480 PF04679 ATP dependent DNA ligase C terminal region D558_RS15480 PF13298 DNA polymerase Ligase (LigD) D558_RS15480 PF01068 ATP dependent DNA ligase domain D558_RS15485 PF00440 Bacterial regulatory proteins, tetR family D558_RS15490 PF02321 Outer membrane efflux protein D558_RS15490 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D558_RS15495 PF13533 Biotin-lipoyl like D558_RS15500 PF00005 ABC transporter D558_RS15515 PF00106 short chain dehydrogenase D558_RS15520 PF00582 Universal stress protein family D558_RS15525 PF07681 DoxX D558_RS15535 PF00578 AhpC/TSA family D558_RS15545 PF03960 ArsC family D558_RS15550 PF02515 CoA-transferase family III D558_RS15555 PF00875 DNA photolyase D558_RS15555 PF03441 FAD binding domain of DNA photolyase D558_RS15575 PF00255 Glutathione peroxidase D558_RS15590 PF03099 Biotin/lipoate A/B protein ligase family D558_RS15590 PF10437 Bacterial lipoate protein ligase C-terminus D558_RS15600 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D558_RS15600 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D558_RS15605 PF03737 Aldolase/RraA D558_RS15610 PF00491 Arginase family D558_RS15620 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS15625 PF00497 Bacterial extracellular solute-binding proteins, family 3 D558_RS15640 PF01026 TatD related DNase D558_RS15645 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D558_RS15645 PF12169 DNA polymerase III subunits gamma and tau domain III D558_RS15645 PF12170 DNA polymerase III tau subunit V interacting with alpha D558_RS15650 PF02223 Thymidylate kinase D558_RS15655 PF02618 YceG-like family D558_RS15660 PF01571 Aminomethyltransferase folate-binding domain D558_RS15665 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D558_RS15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS15670 PF03466 LysR substrate binding domain D558_RS15675 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS15675 PF01610 Transposase D558_RS15675 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS15690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D558_RS15690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D558_RS15695 PF00378 Enoyl-CoA hydratase/isomerase D558_RS15700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS15700 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS15700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS15710 PF03658 RnfH family Ubiquitin D558_RS15720 PF01668 SmpB protein D558_RS15735 PF00990 Diguanylate cyclase, GGDEF domain D558_RS15745 PF01145 SPFH domain / Band 7 family D558_RS15755 PF00958 GMP synthase C terminal domain D558_RS15755 PF00117 Glutamine amidotransferase class-I D558_RS15760 PF00391 PEP-utilising enzyme, mobile domain D558_RS15760 PF02896 PEP-utilising enzyme, TIM barrel domain D558_RS15760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D558_RS15765 PF03618 Kinase/pyrophosphorylase D558_RS15775 PF00588 SpoU rRNA Methylase family D558_RS15775 PF08032 RNA 2'-O ribose methyltransferase substrate binding D558_RS15780 PF01351 Ribonuclease HII D558_RS15790 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D558_RS15790 PF00132 Bacterial transferase hexapeptide (six repeats) D558_RS15795 PF07977 FabA-like domain D558_RS15800 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D558_RS15800 PF14602 Hexapeptide repeat of succinyl-transferase D558_RS15800 PF00132 Bacterial transferase hexapeptide (six repeats) D558_RS15805 PF03938 Outer membrane protein (OmpH-like) D558_RS15810 PF01103 Surface antigen D558_RS15810 PF07244 Surface antigen variable number repeat D558_RS15820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D558_RS15820 PF13288 DXP reductoisomerase C-terminal domain D558_RS15820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D558_RS15830 PF01255 Putative undecaprenyl diphosphate synthase D558_RS15835 PF01765 Ribosome recycling factor D558_RS15840 PF00696 Amino acid kinase family D558_RS15845 PF00889 Elongation factor TS D558_RS15850 PF00318 Ribosomal protein S2 D558_RS15855 PF00557 Metallopeptidase family M24 D558_RS15860 PF01909 Nucleotidyltransferase domain D558_RS15860 PF01966 HD domain D558_RS15860 PF01842 ACT domain D558_RS15860 PF08335 GlnD PII-uridylyltransferase D558_RS15870 PF02600 Disulfide bond formation protein DsbB D558_RS15875 PF00156 Phosphoribosyl transferase domain D558_RS15880 PF02674 Colicin V production protein D558_RS15890 PF08245 Mur ligase middle domain D558_RS15890 PF02875 Mur ligase family, glutamate ligase domain D558_RS15900 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS15910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS15910 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS15910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS15925 PF07195 Flagellar hook-associated protein 2 C-terminus D558_RS15925 PF02465 Flagellar hook-associated protein 2 N-terminus D558_RS15930 PF02561 Flagellar protein FliS D558_RS15935 PF05400 Flagellar protein FliT D558_RS15945 PF01312 FlhB HrpN YscU SpaS Family D558_RS15955 PF02049 Flagellar hook-basal body complex protein FliE D558_RS15960 PF08345 Flagellar M-ring protein C-terminal D558_RS15960 PF01514 Secretory protein of YscJ/FliF family D558_RS15965 PF01706 FliG C-terminal domain D558_RS15965 PF14842 FliG N-terminal domain D558_RS15965 PF14841 FliG middle domain D558_RS15970 PF02108 Flagellar assembly protein FliH D558_RS15990 PF03748 Flagellar basal body-associated protein FliL D558_RS15995 PF02154 Flagellar motor switch protein FliM D558_RS15995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D558_RS16000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D558_RS16000 PF16973 Flagellar motor switch protein FliN N-terminal D558_RS16005 PF04347 Flagellar biosynthesis protein, FliO D558_RS16010 PF00813 FliP family D558_RS16015 PF01313 Bacterial export proteins, family 3 D558_RS16020 PF01311 Bacterial export proteins, family 1 D558_RS16025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D558_RS16025 PF02203 Tar ligand binding domain homologue D558_RS16025 PF00672 HAMP domain D558_RS16035 PF01618 MotA/TolQ/ExbB proton channel family D558_RS16040 PF05280 Flagellar transcriptional activator (FlhC) D558_RS16045 PF05247 Flagellar transcriptional activator (FlhD) D558_RS16050 PF04545 Sigma-70, region 4 D558_RS16050 PF04542 Sigma-70 region 2 D558_RS16050 PF04539 Sigma-70 region 3 D558_RS16060 PF13683 Integrase core domain D558_RS16060 PF13276 HTH-like domain D558_RS16065 PF13276 HTH-like domain D558_RS16065 PF13683 Integrase core domain D558_RS16070 PF01527 Transposase D558_RS16080 PF07715 TonB-dependent Receptor Plug Domain D558_RS16080 PF00593 TonB dependent receptor D558_RS16100 PF17676 LD-carboxypeptidase C-terminal domain D558_RS16100 PF02016 LD-carboxypeptidase N-terminal domain D558_RS16120 PF01970 Tripartite tricarboxylate transporter TctA family D558_RS16125 PF00005 ABC transporter D558_RS16130 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS16135 PF00497 Bacterial extracellular solute-binding proteins, family 3 D558_RS16155 PF00892 EamA-like transporter family D558_RS16160 PF00005 ABC transporter D558_RS16165 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS16165 PF00005 ABC transporter D558_RS16195 PF03741 Integral membrane protein TerC family D558_RS16195 PF03471 Transporter associated domain D558_RS16205 PF00196 Bacterial regulatory proteins, luxR family D558_RS16205 PF00072 Response regulator receiver domain D558_RS16210 PF00497 Bacterial extracellular solute-binding proteins, family 3 D558_RS16210 PF00512 His Kinase A (phospho-acceptor) domain D558_RS16210 PF00989 PAS fold D558_RS16210 PF01627 Hpt domain D558_RS16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS16210 PF00072 Response regulator receiver domain D558_RS16225 PF01527 Transposase D558_RS16230 PF13683 Integrase core domain D558_RS16230 PF13276 HTH-like domain D558_RS16235 PF00282 Pyridoxal-dependent decarboxylase conserved domain D558_RS16240 PF02080 TrkA-C domain D558_RS16240 PF06826 Predicted Permease Membrane Region D558_RS16245 PF04343 Protein of unknown function, DUF488 D558_RS16250 PF00392 Bacterial regulatory proteins, gntR family D558_RS16250 PF07729 FCD domain D558_RS16255 PF03480 Bacterial extracellular solute-binding protein, family 7 D558_RS16265 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D558_RS16265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D558_RS16295 PF02666 Phosphatidylserine decarboxylase D558_RS16300 PF01070 FMN-dependent dehydrogenase D558_RS16305 PF03180 NLPA lipoprotein D558_RS16310 PF13276 HTH-like domain D558_RS16310 PF13683 Integrase core domain D558_RS16315 PF01527 Transposase D558_RS16320 PF00892 EamA-like transporter family D558_RS16325 PF07995 Glucose / Sorbosone dehydrogenase D558_RS16330 PF00043 Glutathione S-transferase, C-terminal domain D558_RS16330 PF02798 Glutathione S-transferase, N-terminal domain D558_RS16335 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS16335 PF01610 Transposase D558_RS16335 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS16340 PF01177 Asp/Glu/Hydantoin racemase D558_RS16345 PF00005 ABC transporter D558_RS16350 PF12399 Branched-chain amino acid ATP-binding cassette transporter D558_RS16350 PF00005 ABC transporter D558_RS16355 PF11862 Domain of unknown function (DUF3382) D558_RS16355 PF02653 Branched-chain amino acid transport system / permease component D558_RS16360 PF02653 Branched-chain amino acid transport system / permease component D558_RS16365 PF13458 Periplasmic binding protein D558_RS16370 PF02592 Putative vitamin uptake transporter D558_RS16375 PF14748 Pyrroline-5-carboxylate reductase dimerisation D558_RS16375 PF03807 NADP oxidoreductase coenzyme F420-dependent D558_RS16380 PF13416 Bacterial extracellular solute-binding protein D558_RS16385 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS16390 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS16395 PF17912 MalK OB fold domain D558_RS16395 PF00005 ABC transporter D558_RS16400 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS16400 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS16400 PF01610 Transposase D558_RS16405 PF13458 Periplasmic binding protein D558_RS16415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D558_RS16415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D558_RS16415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D558_RS16430 PF00534 Glycosyl transferases group 1 D558_RS16440 PF00005 ABC transporter D558_RS16470 PF00210 Ferritin-like domain D558_RS16475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS16475 PF03466 LysR substrate binding domain D558_RS16480 PF00271 Helicase conserved C-terminal domain D558_RS16480 PF00270 DEAD/DEAH box helicase D558_RS16480 PF17191 RecG wedge domain D558_RS16485 PF01042 Endoribonuclease L-PSP D558_RS16495 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS16495 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS16495 PF01610 Transposase D558_RS16500 PF00175 Oxidoreductase NAD-binding domain D558_RS16500 PF00970 Oxidoreductase FAD-binding domain D558_RS16515 PF08402 TOBE domain D558_RS16515 PF00005 ABC transporter D558_RS16520 PF02678 Pirin D558_RS16520 PF05726 Pirin C-terminal cupin domain D558_RS16530 PF03466 LysR substrate binding domain D558_RS16530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS16535 PF00072 Response regulator receiver domain D558_RS16535 PF00158 Sigma-54 interaction domain D558_RS16535 PF02954 Bacterial regulatory protein, Fis family D558_RS16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D558_RS16540 PF00512 His Kinase A (phospho-acceptor) domain D558_RS16540 PF00989 PAS fold D558_RS16545 PF03951 Glutamine synthetase, beta-Grasp domain D558_RS16545 PF00120 Glutamine synthetase, catalytic domain D558_RS16550 PF04055 Radical SAM superfamily D558_RS16550 PF06969 HemN C-terminal domain D558_RS16555 PF01725 Ham1 family D558_RS16560 PF00990 Diguanylate cyclase, GGDEF domain D558_RS16560 PF03707 Bacterial signalling protein N terminal repeat D558_RS16560 PF00563 EAL domain D558_RS16565 PF00672 HAMP domain D558_RS16565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D558_RS16565 PF02203 Tar ligand binding domain homologue D558_RS16570 PF01610 Transposase D558_RS16570 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS16570 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS16575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS16575 PF03466 LysR substrate binding domain D558_RS16580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D558_RS16580 PF02770 Acyl-CoA dehydrogenase, middle domain D558_RS16580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D558_RS16585 PF03972 MmgE/PrpD family D558_RS16595 PF01138 3' exoribonuclease family, domain 1 D558_RS16595 PF03725 3' exoribonuclease family, domain 2 D558_RS16600 PF03755 YicC-like family, N-terminal region D558_RS16600 PF08340 Domain of unknown function (DUF1732) D558_RS16615 PF00877 NlpC/P60 family D558_RS16625 PF00625 Guanylate kinase D558_RS16630 PF01192 RNA polymerase Rpb6 D558_RS16635 PF13291 ACT domain D558_RS16635 PF02824 TGS domain D558_RS16635 PF04607 Region found in RelA / SpoT proteins D558_RS16645 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS16650 PF00497 Bacterial extracellular solute-binding proteins, family 3 D558_RS16675 PF02753 Pili assembly chaperone PapD, C-terminal domain D558_RS16675 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D558_RS16680 PF16970 Type-1 fimbrial protein, A D558_RS16685 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS16685 PF01610 Transposase D558_RS16685 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS16705 PF13472 GDSL-like Lipase/Acylhydrolase family D558_RS16710 PF13145 PPIC-type PPIASE domain D558_RS16715 PF03009 Glycerophosphoryl diester phosphodiesterase family D558_RS16720 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D558_RS16725 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS16725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D558_RS16740 PF00403 Heavy-metal-associated domain D558_RS16745 PF09278 MerR, DNA binding D558_RS16745 PF00376 MerR family regulatory protein D558_RS16750 PF05958 tRNA (Uracil-5-)-methyltransferase D558_RS16755 PF01527 Transposase D558_RS16760 PF13683 Integrase core domain D558_RS16760 PF13276 HTH-like domain D558_RS16780 PF01551 Peptidase family M23 D558_RS16780 PF01476 LysM domain D558_RS16790 PF01975 Survival protein SurE D558_RS16795 PF02660 Glycerol-3-phosphate acyltransferase D558_RS16810 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS16815 PF04909 Amidohydrolase D558_RS16820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS16820 PF03466 LysR substrate binding domain D558_RS16825 PF00814 Glycoprotease family D558_RS16830 PF00860 Permease family D558_RS16835 PF00296 Luciferase-like monooxygenase D558_RS16840 PF00085 Thioredoxin D558_RS16845 PF01205 Uncharacterized protein family UPF0029 D558_RS16870 PF00005 ABC transporter D558_RS16880 PF17676 LD-carboxypeptidase C-terminal domain D558_RS16880 PF02016 LD-carboxypeptidase N-terminal domain D558_RS16885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D558_RS16900 PF03334 Na+/H+ antiporter subunit D558_RS16905 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D558_RS16910 PF01899 Na+/H+ ion antiporter subunit D558_RS16915 PF00361 Proton-conducting membrane transporter D558_RS16930 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS16950 PF00149 Calcineurin-like phosphoesterase D558_RS16950 PF12320 Type 5 capsule protein repressor C-terminal domain D558_RS16960 PF01037 Lrp/AsnC ligand binding domain D558_RS16975 PF01610 Transposase D558_RS16975 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS16975 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS16980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D558_RS16985 PF08220 DeoR-like helix-turn-helix domain D558_RS16985 PF00455 DeoR C terminal sensor domain D558_RS17000 PF00107 Zinc-binding dehydrogenase D558_RS17000 PF16884 N-terminal domain of oxidoreductase D558_RS17005 PF08361 MAATS-type transcriptional repressor, C-terminal region D558_RS17005 PF00440 Bacterial regulatory proteins, tetR family D558_RS17015 PF00005 ABC transporter D558_RS17030 PF04073 Aminoacyl-tRNA editing domain D558_RS17060 PF00472 RF-1 domain D558_RS17070 PF01242 6-pyruvoyl tetrahydropterin synthase D558_RS17075 PF01070 FMN-dependent dehydrogenase D558_RS17080 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS17080 PF01610 Transposase D558_RS17080 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS17085 PF00672 HAMP domain D558_RS17085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D558_RS17085 PF16591 Helical bimodular sensor domain D558_RS17100 PF07733 Bacterial DNA polymerase III alpha NTPase domain D558_RS17100 PF02811 PHP domain D558_RS17100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D558_RS17100 PF14579 Helix-hairpin-helix motif D558_RS17110 PF03649 Uncharacterised protein family (UPF0014) D558_RS17115 PF00005 ABC transporter D558_RS17120 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain D558_RS17120 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain D558_RS17125 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS17125 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS17125 PF01610 Transposase D558_RS17130 PF07687 Peptidase dimerisation domain D558_RS17130 PF01546 Peptidase family M20/M25/M40 D558_RS17150 PF00392 Bacterial regulatory proteins, gntR family D558_RS17150 PF00155 Aminotransferase class I and II D558_RS17160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D558_RS17160 PF07992 Pyridine nucleotide-disulphide oxidoreductase D558_RS17170 PF00793 DAHP synthetase I family D558_RS17190 PF12833 Helix-turn-helix domain D558_RS17190 PF01965 DJ-1/PfpI family D558_RS17195 PF07237 Protein of unknown function (DUF1428) D558_RS17215 PF02535 ZIP Zinc transporter D558_RS17225 PF01381 Helix-turn-helix D558_RS17225 PF07883 Cupin domain D558_RS17235 PF01527 Transposase D558_RS17240 PF13683 Integrase core domain D558_RS17240 PF13276 HTH-like domain D558_RS17245 PF13683 Integrase core domain D558_RS17245 PF13276 HTH-like domain D558_RS17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS17255 PF03466 LysR substrate binding domain D558_RS17260 PF07690 Major Facilitator Superfamily D558_RS17275 PF00593 TonB dependent receptor D558_RS17275 PF07715 TonB-dependent Receptor Plug Domain D558_RS17280 PF12833 Helix-turn-helix domain D558_RS17285 PF07690 Major Facilitator Superfamily D558_RS17290 PF02311 AraC-like ligand binding domain D558_RS17290 PF12833 Helix-turn-helix domain D558_RS17295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D558_RS17295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D558_RS17300 PF07690 Major Facilitator Superfamily D558_RS17315 PF00171 Aldehyde dehydrogenase family D558_RS17320 PF00005 ABC transporter D558_RS17350 PF03466 LysR substrate binding domain D558_RS17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS17355 PF12833 Helix-turn-helix domain D558_RS17355 PF00730 HhH-GPD superfamily base excision DNA repair protein D558_RS17355 PF02805 Metal binding domain of Ada D558_RS17355 PF06029 AlkA N-terminal domain D558_RS17370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D558_RS17370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D558_RS17385 PF01569 PAP2 superfamily D558_RS17395 PF02567 Phenazine biosynthesis-like protein D558_RS17400 PF01638 HxlR-like helix-turn-helix D558_RS17435 PF02661 Fic/DOC family D558_RS17435 PF13784 Fic/DOC family N-terminal D558_RS17450 PF00478 IMP dehydrogenase / GMP reductase domain D558_RS17450 PF00571 CBS domain D558_RS17465 PF08021 Siderophore-interacting FAD-binding domain D558_RS17465 PF04954 Siderophore-interacting protein D558_RS17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS17470 PF03466 LysR substrate binding domain D558_RS17480 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS17490 PF01527 Transposase D558_RS17495 PF13276 HTH-like domain D558_RS17495 PF13683 Integrase core domain D558_RS17500 PF00528 Binding-protein-dependent transport system inner membrane component D558_RS17500 PF12911 N-terminal TM domain of oligopeptide transport permease C D558_RS17510 PF00005 ABC transporter D558_RS17510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D558_RS17515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D558_RS17560 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D558_RS17565 PF13683 Integrase core domain D558_RS17565 PF13276 HTH-like domain D558_RS17570 PF01527 Transposase D558_RS17575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D558_RS17575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D558_RS17580 PF03480 Bacterial extracellular solute-binding protein, family 7 D558_RS17585 PF01272 Transcription elongation factor, GreA/GreB, C-term D558_RS17585 PF03449 Transcription elongation factor, N-terminal D558_RS17590 PF02811 PHP domain D558_RS17605 PF01610 Transposase D558_RS17605 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS17605 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS17625 PF03466 LysR substrate binding domain D558_RS17630 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS17640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D558_RS17640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D558_RS17650 PF00171 Aldehyde dehydrogenase family D558_RS17660 PF03466 LysR substrate binding domain D558_RS17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS17675 PF02615 Malate/L-lactate dehydrogenase D558_RS17680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D558_RS17680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D558_RS17690 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS17695 PF01527 Transposase D558_RS17700 PF03401 Tripartite tricarboxylate transporter family receptor D558_RS17730 PF08281 Sigma-70, region 4 D558_RS17730 PF04542 Sigma-70 region 2 D558_RS17735 PF16220 Domain of unknown function (DUF4880) D558_RS17735 PF04773 FecR protein D558_RS17750 PF00005 ABC transporter D558_RS17765 PF02272 DHHA1 domain D558_RS17765 PF17768 RecJ OB domain D558_RS17765 PF01368 DHH family D558_RS17770 PF03462 PCRF domain D558_RS17770 PF00472 RF-1 domain D558_RS17775 PF00106 short chain dehydrogenase D558_RS17780 PF01336 OB-fold nucleic acid binding domain D558_RS17780 PF00152 tRNA synthetases class II (D, K and N) D558_RS17790 PF02142 MGS-like domain D558_RS17805 PF00593 TonB dependent receptor D558_RS17805 PF07660 Secretin and TonB N terminus short domain D558_RS17805 PF07715 TonB-dependent Receptor Plug Domain D558_RS17810 PF13276 HTH-like domain D558_RS17810 PF13683 Integrase core domain D558_RS17815 PF01695 IstB-like ATP binding protein D558_RS17820 PF00665 Integrase core domain D558_RS17820 PF02796 Helix-turn-helix domain of resolvase D558_RS17825 PF01527 Transposase D558_RS17830 PF00593 TonB dependent receptor D558_RS17830 PF07660 Secretin and TonB N terminus short domain D558_RS17830 PF07715 TonB-dependent Receptor Plug Domain D558_RS17835 PF04384 Iron-sulphur cluster assembly D558_RS17840 PF00111 2Fe-2S iron-sulfur cluster binding domain D558_RS17845 PF00012 Hsp70 protein D558_RS17850 PF07743 HSCB C-terminal oligomerisation domain D558_RS17855 PF01521 Iron-sulphur cluster biosynthesis D558_RS17860 PF01592 NifU-like N terminal domain D558_RS17865 PF00266 Aminotransferase class-V D558_RS17870 PF02082 Transcriptional regulator D558_RS17875 PF01451 Low molecular weight phosphotyrosine protein phosphatase D558_RS17880 PF00271 Helicase conserved C-terminal domain D558_RS17880 PF17757 UvrB interaction domain D558_RS17880 PF12344 Ultra-violet resistance protein B D558_RS17880 PF02151 UvrB/uvrC motif D558_RS17880 PF04851 Type III restriction enzyme, res subunit D558_RS17885 PF00155 Aminotransferase class I and II D558_RS17890 PF00665 Integrase core domain D558_RS17890 PF13333 Integrase core domain D558_RS17915 PF02627 Carboxymuconolactone decarboxylase family D558_RS17930 PF00107 Zinc-binding dehydrogenase D558_RS17930 PF08240 Alcohol dehydrogenase GroES-like domain D558_RS17935 PF13683 Integrase core domain D558_RS17935 PF13276 HTH-like domain D558_RS17945 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS17945 PF01610 Transposase D558_RS17945 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS17950 PF02190 ATP-dependent protease La (LON) substrate-binding domain D558_RS17950 PF05362 Lon protease (S16) C-terminal proteolytic domain D558_RS17950 PF00004 ATPase family associated with various cellular activities (AAA) D558_RS17955 PF06689 ClpX C4-type zinc finger D558_RS17955 PF07724 AAA domain (Cdc48 subfamily) D558_RS17955 PF10431 C-terminal, D2-small domain, of ClpB protein D558_RS17960 PF00574 Clp protease D558_RS17965 PF05697 Bacterial trigger factor protein (TF) D558_RS17965 PF05698 Bacterial trigger factor protein (TF) C-terminus D558_RS17965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D558_RS17970 PF03350 Uncharacterized protein family, UPF0114 D558_RS17975 PF01610 Transposase D558_RS17975 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS17975 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS17980 PF01527 Transposase D558_RS17985 PF02796 Helix-turn-helix domain of resolvase D558_RS17985 PF00665 Integrase core domain D558_RS17990 PF01695 IstB-like ATP binding protein D558_RS17995 PF13683 Integrase core domain D558_RS17995 PF13276 HTH-like domain D558_RS18005 PF00313 'Cold-shock' DNA-binding domain D558_RS18035 PF13817 IS66 C-terminal element D558_RS18035 PF13007 Transposase C of IS166 homeodomain D558_RS18035 PF13005 zinc-finger binding domain of transposase IS66 D558_RS18035 PF03050 Transposase IS66 family D558_RS18050 PF13276 HTH-like domain D558_RS18050 PF13683 Integrase core domain D558_RS18060 PF01527 Transposase D558_RS18090 PF00202 Aminotransferase class-III D558_RS18095 PF00563 EAL domain D558_RS18095 PF00990 Diguanylate cyclase, GGDEF domain D558_RS18095 PF03707 Bacterial signalling protein N terminal repeat D558_RS18110 PF03466 LysR substrate binding domain D558_RS18110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D558_RS18125 PF13276 HTH-like domain D558_RS18125 PF13683 Integrase core domain D558_RS18130 PF13533 Biotin-lipoyl like D558_RS18135 PF13533 Biotin-lipoyl like D558_RS18140 PF00563 EAL domain D558_RS18140 PF04940 Sensors of blue-light using FAD D558_RS18170 PF07715 TonB-dependent Receptor Plug Domain D558_RS18170 PF00593 TonB dependent receptor D558_RS18175 PF07690 Major Facilitator Superfamily D558_RS18185 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D558_RS18185 PF01610 Transposase D558_RS18185 PF13542 Helix-turn-helix domain of transposase family ISL3 D558_RS18190 PF01527 Transposase D558_RS18215 PF01527 Transposase D558_RS18230 PF12445 Flagellin protein D558_RS18230 PF00669 Bacterial flagellin N-terminal helical region D558_RS18230 PF00700 Bacterial flagellin C-terminal helical region D558_RS18235 PF12792 CSS motif domain associated with EAL D558_RS18235 PF00563 EAL domain D558_RS18245 PF01527 Transposase