D558_RS00055 SM00267 diguanylate cyclase D558_RS00080 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS00140 SM01209 D558_RS00140 D558_RS00140 SM01210 D558_RS00140 D558_RS00175 SM00387 Histidine kinase-like ATPases D558_RS00175 SM00388 His Kinase A (phosphoacceptor) domain D558_RS00180 SM00382 ATPases associated with a variety of cellular activities D558_RS00180 SM00448 cheY-homologous receiver domain D558_RS00230 SM00382 ATPases associated with a variety of cellular activities D558_RS00255 SM00564 beta-propeller repeat D558_RS00300 SM00478 endonuclease III D558_RS00305 SM00840 D558_RS00305 D558_RS00310 SM00028 Tetratricopeptide repeats D558_RS00330 SM01091 Transporter associated domain D558_RS00390 SM00382 ATPases associated with a variety of cellular activities D558_RS00405 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS00405 SM00895 D558_RS00405 D558_RS00435 SM00829 Enoylreductase D558_RS00445 SM00533 DNA-binding domain of DNA mismatch repair MUTS family D558_RS00445 SM00534 ATPase domain of DNA mismatch repair MUTS family D558_RS00450 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. D558_RS00465 SM01130 D558_RS00465 D558_RS00510 SM00155 Phospholipase D. Active site motifs. D558_RS00595 SM00052 Putative diguanylate phosphodiesterase D558_RS00595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) D558_RS00595 SM00091 PAS domain D558_RS00595 SM00267 diguanylate cyclase D558_RS00600 SM00450 Rhodanese Homology Domain D558_RS00630 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS00630 SM00866 D558_RS00630 D558_RS00710 SM00346 helix_turn_helix isocitrate lyase regulation D558_RS00720 SM00382 ATPases associated with a variety of cellular activities D558_RS00755 SM00829 Enoylreductase D558_RS00780 SM00938 Nitrogen regulatory protein P-II D558_RS00805 SM00422 helix_turn_helix, mercury resistance D558_RS00830 SM00382 ATPases associated with a variety of cellular activities D558_RS00860 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS00860 SM00895 D558_RS00860 D558_RS00870 SM00869 Autotransporter beta-domain D558_RS00925 SM00843 D558_RS00925 D558_RS00935 SM00463 Small MutS-related domain D558_RS00975 SM00387 Histidine kinase-like ATPases D558_RS00975 SM00388 His Kinase A (phosphoacceptor) domain D558_RS00980 SM00448 cheY-homologous receiver domain D558_RS00980 SM00862 Transcriptional regulatory protein, C terminal D558_RS00995 SM01329 D558_RS00995 D558_RS01040 SM00271 DnaJ molecular chaperone homology domain D558_RS01150 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS01150 SM00895 D558_RS01150 D558_RS01305 SM00346 helix_turn_helix isocitrate lyase regulation D558_RS01310 SM00852 Probable molybdopterin binding domain D558_RS01325 SM00487 DEAD-like helicases superfamily D558_RS01325 SM00490 helicase superfamily c-terminal domain D558_RS01430 SM00798 AICARFT/IMPCHase bienzyme D558_RS01430 SM00851 MGS-like domain D558_RS01440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 D558_RS01455 SM00382 ATPases associated with a variety of cellular activities D558_RS01460 SM00341 Helicase and RNase D C-terminal D558_RS01460 SM00487 DEAD-like helicases superfamily D558_RS01460 SM00490 helicase superfamily c-terminal domain D558_RS01460 SM00956 D558_RS01460 D558_RS01470 SM00448 cheY-homologous receiver domain D558_RS01470 SM00862 Transcriptional regulatory protein, C terminal D558_RS01475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D558_RS01475 SM00387 Histidine kinase-like ATPases D558_RS01525 SM00382 ATPases associated with a variety of cellular activities D558_RS01540 SM00382 ATPases associated with a variety of cellular activities D558_RS01545 SM00382 ATPases associated with a variety of cellular activities D558_RS01580 SM00936 Penicillin-binding protein 5, C-terminal domain D558_RS01600 SM00829 Enoylreductase D558_RS01605 SM00387 Histidine kinase-like ATPases D558_RS01605 SM00388 His Kinase A (phosphoacceptor) domain D558_RS01610 SM00421 helix_turn_helix, Lux Regulon D558_RS01610 SM00448 cheY-homologous receiver domain D558_RS01620 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS01620 SM00895 D558_RS01620 D558_RS01650 SM00487 DEAD-like helicases superfamily D558_RS01650 SM00490 helicase superfamily c-terminal domain D558_RS01665 SM00831 Cation transporter/ATPase, N-terminus D558_RS01770 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family D558_RS01810 SM00346 helix_turn_helix isocitrate lyase regulation D558_RS01815 SM00965 Secretin and TonB N terminus short domain D558_RS01835 SM00382 ATPases associated with a variety of cellular activities D558_RS01850 SM00880 D558_RS01850 D558_RS01850 SM01118 D558_RS01850 D558_RS01855 SM00382 ATPases associated with a variety of cellular activities D558_RS01855 SM00962 SRP54-type protein, GTPase domain D558_RS01855 SM00963 SRP54-type protein, helical bundle domain D558_RS02000 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS02000 SM00895 D558_RS02000 D558_RS02015 SM01007 Class II Aldolase and Adducin N-terminal domain D558_RS02065 SM01400 D558_RS02065 D558_RS02085 SM00028 Tetratricopeptide repeats D558_RS02090 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain D558_RS02090 SM01232 D558_RS02090 D558_RS02135 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS02135 SM00895 D558_RS02135 D558_RS02150 SM00387 Histidine kinase-like ATPases D558_RS02150 SM00388 His Kinase A (phosphoacceptor) domain D558_RS02155 SM00448 cheY-homologous receiver domain D558_RS02155 SM00862 Transcriptional regulatory protein, C terminal D558_RS02215 SM00984 UDP binding domain D558_RS02250 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS02285 SM00382 ATPases associated with a variety of cellular activities D558_RS02385 SM00862 Transcriptional regulatory protein, C terminal D558_RS02400 SM00387 Histidine kinase-like ATPases D558_RS02400 SM00388 His Kinase A (phosphoacceptor) domain D558_RS02405 SM00448 cheY-homologous receiver domain D558_RS02405 SM00862 Transcriptional regulatory protein, C terminal D558_RS02435 SM00382 ATPases associated with a variety of cellular activities D558_RS02455 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS02455 SM00895 D558_RS02455 D558_RS02475 SM00382 ATPases associated with a variety of cellular activities D558_RS02520 SM00450 Rhodanese Homology Domain D558_RS02550 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS02570 SM00903 Flavin reductase like domain D558_RS02595 SM00881 CoA binding domain D558_RS02740 SM00382 ATPases associated with a variety of cellular activities D558_RS02755 SM00382 ATPases associated with a variety of cellular activities D558_RS02755 SM00962 SRP54-type protein, GTPase domain D558_RS02755 SM00963 SRP54-type protein, helical bundle domain D558_RS02770 SM00644 D558_RS02770 D558_RS02780 SM00382 ATPases associated with a variety of cellular activities D558_RS02785 SM00382 ATPases associated with a variety of cellular activities D558_RS02830 SM00387 Histidine kinase-like ATPases D558_RS02960 SM00822 D558_RS02960 D558_RS02985 SM00382 ATPases associated with a variety of cellular activities D558_RS02985 SM00930 D558_RS02985 D558_RS03030 SM00116 Domain in cystathionine beta-synthase and other proteins. D558_RS03030 SM00924 MgtE intracellular N domain D558_RS03045 SM00344 helix_turn_helix ASNC type D558_RS03085 SM00244 prohibitin homologues D558_RS03090 SM00244 prohibitin homologues D558_RS03110 SM00382 ATPases associated with a variety of cellular activities D558_RS03145 SM00562 D558_RS03145 D558_RS03290 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS03325 SM00387 Histidine kinase-like ATPases D558_RS03325 SM00433 TopoisomeraseII D558_RS03335 SM00357 Cold shock protein domain D558_RS03335 SM00382 ATPases associated with a variety of cellular activities D558_RS03335 SM00959 Rho termination factor, N-terminal domain D558_RS03410 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs D558_RS03410 SM00474 3'-5' exonuclease D558_RS03410 SM00475 5'-3' exonuclease D558_RS03410 SM00482 DNA polymerase A domain D558_RS03440 SM00382 ATPases associated with a variety of cellular activities D558_RS03495 SM00411 bacterial (prokaryotic) histone like domain D558_RS03500 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS03550 SM00382 ATPases associated with a variety of cellular activities D558_RS03625 SM00479 D558_RS03625 D558_RS03665 SM00841 Elongation factor P, C-terminal D558_RS03665 SM01185 D558_RS03665 D558_RS03680 SM00382 ATPases associated with a variety of cellular activities D558_RS03710 SM00028 Tetratricopeptide repeats D558_RS03775 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS03860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) D558_RS03860 SM00267 diguanylate cyclase D558_RS03880 SM00248 ankyrin repeats D558_RS03930 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS03930 SM00895 D558_RS03930 D558_RS03990 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS04025 SM00903 Flavin reductase like domain D558_RS04030 SM00116 Domain in cystathionine beta-synthase and other proteins. D558_RS04045 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS04065 SM00382 ATPases associated with a variety of cellular activities D558_RS04070 SM00382 ATPases associated with a variety of cellular activities D558_RS04190 SM00382 ATPases associated with a variety of cellular activities D558_RS04230 SM00965 Secretin and TonB N terminus short domain D558_RS04270 SM00382 ATPases associated with a variety of cellular activities D558_RS04290 SM00382 ATPases associated with a variety of cellular activities D558_RS04340 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain D558_RS04355 SM00530 Helix-turn-helix XRE-family like proteins D558_RS04365 SM00822 D558_RS04365 D558_RS04415 SM00382 ATPases associated with a variety of cellular activities D558_RS04420 SM00382 ATPases associated with a variety of cellular activities D558_RS04425 SM00028 Tetratricopeptide repeats D558_RS04460 SM00382 ATPases associated with a variety of cellular activities D558_RS04485 SM00903 Flavin reductase like domain D558_RS04530 SM00646 D558_RS04530 D558_RS04540 SM00853 MutL C terminal dimerisation domain D558_RS04540 SM01340 D558_RS04540 D558_RS04555 SM00382 ATPases associated with a variety of cellular activities D558_RS04625 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS04625 SM00866 D558_RS04625 D558_RS04660 SM00563 Phosphate acyltransferases D558_RS04790 SM00155 Phospholipase D. Active site motifs. D558_RS04795 SM00947 Carbonic anhydrase D558_RS04830 SM00882 Coenzyme A transferase D558_RS04840 SM00346 helix_turn_helix isocitrate lyase regulation D558_RS04860 SM00869 Autotransporter beta-domain D558_RS04895 SM01130 D558_RS04895 D558_RS04945 SM00869 Autotransporter beta-domain D558_RS04980 SM00937 D558_RS04980 D558_RS05005 SM00965 Secretin and TonB N terminus short domain D558_RS05035 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain D558_RS05060 SM00965 Secretin and TonB N terminus short domain D558_RS05105 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase D558_RS05155 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS05155 SM00895 D558_RS05155 D558_RS05165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D558_RS05165 SM00245 tail specific protease D558_RS05175 SM00855 Phosphoglycerate mutase family D558_RS05180 SM00450 Rhodanese Homology Domain D558_RS05235 SM00448 cheY-homologous receiver domain D558_RS05240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D558_RS05240 SM00387 Histidine kinase-like ATPases D558_RS05240 SM00388 His Kinase A (phosphoacceptor) domain D558_RS05285 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS05285 SM00866 D558_RS05285 D558_RS05290 SM00530 Helix-turn-helix XRE-family like proteins D558_RS05355 SM00344 helix_turn_helix ASNC type D558_RS05370 SM00387 Histidine kinase-like ATPases D558_RS05370 SM01049 D558_RS05370 D558_RS05375 SM00421 helix_turn_helix, Lux Regulon D558_RS05375 SM00448 cheY-homologous receiver domain D558_RS05395 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS05450 SM00382 ATPases associated with a variety of cellular activities D558_RS05455 SM00382 ATPases associated with a variety of cellular activities D558_RS05460 SM00100 Cyclic nucleotide-monophosphate binding domain D558_RS05470 SM00382 ATPases associated with a variety of cellular activities D558_RS05490 SM00382 ATPases associated with a variety of cellular activities D558_RS05510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D558_RS05515 SM00849 Metallo-beta-lactamase superfamily D558_RS05555 SM00342 helix_turn_helix, arabinose operon control protein D558_RS05565 SM00986 Uracil DNA glycosylase superfamily D558_RS05565 SM00987 UreE urease accessory protein, C-terminal domain D558_RS05570 SM00487 DEAD-like helicases superfamily D558_RS05570 SM00490 helicase superfamily c-terminal domain D558_RS05610 SM00460 Transglutaminase/protease-like homologues D558_RS05660 SM00996 S-adenosyl-L-homocysteine hydrolase D558_RS05660 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D558_RS05740 SM00382 ATPases associated with a variety of cellular activities D558_RS05750 SM00833 Cobalamin synthesis protein cobW C-terminal domain D558_RS05765 SM00382 ATPases associated with a variety of cellular activities D558_RS05765 SM01086 C-terminal, D2-small domain, of ClpB protein D558_RS05780 SM00729 Elongator protein 3, MiaB family, Radical SAM D558_RS05800 SM00936 Penicillin-binding protein 5, C-terminal domain D558_RS05820 SM00382 ATPases associated with a variety of cellular activities D558_RS05890 SM00155 Phospholipase D. Active site motifs. D558_RS05910 SM00834 Putative regulatory protein D558_RS05930 SM01130 D558_RS05930 D558_RS05935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. D558_RS05955 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS05955 SM00895 D558_RS05955 D558_RS05965 SM00382 ATPases associated with a variety of cellular activities D558_RS05980 SM00387 Histidine kinase-like ATPases D558_RS05980 SM00388 His Kinase A (phosphoacceptor) domain D558_RS05985 SM00448 cheY-homologous receiver domain D558_RS05985 SM00862 Transcriptional regulatory protein, C terminal D558_RS06045 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain D558_RS06045 SM00437 Bacterial DNA topoisomerase I DNA-binding domain D558_RS06045 SM00493 D558_RS06045 D558_RS06060 SM00382 ATPases associated with a variety of cellular activities D558_RS06100 SM00344 helix_turn_helix ASNC type D558_RS06110 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain D558_RS06145 SM00387 Histidine kinase-like ATPases D558_RS06145 SM00433 TopoisomeraseII D558_RS06150 SM00480 DNA polymerase III beta subunit D558_RS06170 SM01234 D558_RS06170 D558_RS06190 SM00382 ATPases associated with a variety of cellular activities D558_RS06195 SM00382 ATPases associated with a variety of cellular activities D558_RS06230 SM00919 Malic enzyme, NAD binding domain D558_RS06230 SM01274 D558_RS06230 D558_RS06235 SM00448 cheY-homologous receiver domain D558_RS06235 SM00862 Transcriptional regulatory protein, C terminal D558_RS06240 SM00387 Histidine kinase-like ATPases D558_RS06240 SM00388 His Kinase A (phosphoacceptor) domain D558_RS06265 SM00357 Cold shock protein domain D558_RS06270 SM01228 D558_RS06270 D558_RS06285 SM00470 ParB-like nuclease domain D558_RS06325 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. D558_RS06325 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. D558_RS06355 SM00663 RNA polymerase I subunit A N-terminus D558_RS06400 SM00838 Elongation factor G C-terminus D558_RS06400 SM00889 Elongation factor G, domain IV D558_RS06410 SM01403 D558_RS06410 D558_RS06430 SM01382 D558_RS06430 D558_RS06430 SM01383 D558_RS06430 D558_RS06445 SM00322 K homology RNA-binding domain D558_RS06485 SM00382 ATPases associated with a variety of cellular activities D558_RS06500 SM00342 helix_turn_helix, arabinose operon control protein D558_RS06515 SM01374 D558_RS06515 D558_RS06585 SM00363 S4 RNA-binding domain D558_RS06585 SM01390 D558_RS06585 D558_RS06590 SM00662 RNA polymerases D D558_RS06620 SM01004 Delta-aminolevulinic acid dehydratase D558_RS06650 SM01219 D558_RS06650 D558_RS06670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D558_RS06675 SM00421 helix_turn_helix, Lux Regulon D558_RS06775 SM01119 D558_RS06775 D558_RS06810 SM00422 helix_turn_helix, mercury resistance D558_RS06815 SM00849 Metallo-beta-lactamase superfamily D558_RS06830 SM00052 Putative diguanylate phosphodiesterase D558_RS06845 SM00836 DALR anticodon binding domain D558_RS06845 SM01016 Arginyl tRNA synthetase N terminal dom D558_RS06865 SM00917 LeuA allosteric (dimerisation) domain D558_RS06985 SM00342 helix_turn_helix, arabinose operon control protein D558_RS07015 SM00487 DEAD-like helicases superfamily D558_RS07015 SM00490 helicase superfamily c-terminal domain D558_RS07095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D558_RS07180 SM00382 ATPases associated with a variety of cellular activities D558_RS07205 SM00382 ATPases associated with a variety of cellular activities D558_RS07240 SM00829 Enoylreductase D558_RS07380 SM00984 UDP binding domain D558_RS07390 SM00344 helix_turn_helix ASNC type D558_RS07445 SM01130 D558_RS07445 D558_RS07460 SM00665 Cytochrome b-561 / ferric reductase transmembrane domain. D558_RS07525 SM00346 helix_turn_helix isocitrate lyase regulation D558_RS07610 SM00822 D558_RS07610 D558_RS07675 SM00342 helix_turn_helix, arabinose operon control protein D558_RS07705 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS07710 SM00382 ATPases associated with a variety of cellular activities D558_RS07780 SM00926 Molybdopterin oxidoreductase Fe4S4 domain D558_RS07880 SM00925 MltA specific insert domain D558_RS07905 SM00905 Dihydroneopterin aldolase D558_RS07915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D558_RS07965 SM00382 ATPases associated with a variety of cellular activities D558_RS08010 SM00382 ATPases associated with a variety of cellular activities D558_RS08015 SM00382 ATPases associated with a variety of cellular activities D558_RS08155 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D558_RS08170 SM00845 GatB domain D558_RS08245 SM00749 bacterial OsmY and nodulation domain D558_RS08320 SM00382 ATPases associated with a variety of cellular activities D558_RS08340 SM00116 Domain in cystathionine beta-synthase and other proteins. D558_RS08375 SM00382 ATPases associated with a variety of cellular activities D558_RS08380 SM00382 ATPases associated with a variety of cellular activities D558_RS08425 SM00797 Allophanate hydrolase subunit 2 D558_RS08430 SM00796 Allophanate hydrolase subunit 1 D558_RS08455 SM00448 cheY-homologous receiver domain D558_RS08455 SM00862 Transcriptional regulatory protein, C terminal D558_RS08470 SM00978 D558_RS08470 D558_RS08485 SM00382 ATPases associated with a variety of cellular activities D558_RS08595 SM01018 B12 binding domain D558_RS08605 SM00530 Helix-turn-helix XRE-family like proteins D558_RS08610 SM00478 endonuclease III D558_RS08630 SM00382 ATPases associated with a variety of cellular activities D558_RS08635 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS08650 SM00382 ATPases associated with a variety of cellular activities D558_RS08770 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS08795 SM00382 ATPases associated with a variety of cellular activities D558_RS08800 SM00382 ATPases associated with a variety of cellular activities D558_RS08810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D558_RS08810 SM00331 Sigma factor PP2C-like phosphatases D558_RS08825 SM00267 diguanylate cyclase D558_RS08835 SM00822 D558_RS08835 D558_RS08895 SM00732 Likely ribonuclease with RNase H fold. D558_RS08920 SM00563 Phosphate acyltransferases D558_RS08950 SM00955 D558_RS08950 D558_RS08980 SM00878 Biotin carboxylase C-terminal domain D558_RS09065 SM00344 helix_turn_helix ASNC type D558_RS09090 SM00382 ATPases associated with a variety of cellular activities D558_RS09095 SM00382 ATPases associated with a variety of cellular activities D558_RS09140 SM00530 Helix-turn-helix XRE-family like proteins D558_RS09185 SM00859 Semialdehyde dehydrogenase, NAD binding domain D558_RS09215 SM00363 S4 RNA-binding domain D558_RS09235 SM00342 helix_turn_helix, arabinose operon control protein D558_RS09270 SM00342 helix_turn_helix, arabinose operon control protein D558_RS09355 SM00564 beta-propeller repeat D558_RS09360 SM00862 Transcriptional regulatory protein, C terminal D558_RS09405 SM00257 Lysin motif D558_RS09410 SM00849 Metallo-beta-lactamase superfamily D558_RS09445 SM00479 D558_RS09445 D558_RS09465 SM00382 ATPases associated with a variety of cellular activities D558_RS09520 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS09540 SM00838 Elongation factor G C-terminus D558_RS09540 SM00889 Elongation factor G, domain IV D558_RS09605 SM00448 cheY-homologous receiver domain D558_RS09605 SM00862 Transcriptional regulatory protein, C terminal D558_RS09610 SM00387 Histidine kinase-like ATPases D558_RS09610 SM00388 His Kinase A (phosphoacceptor) domain D558_RS09700 SM00344 helix_turn_helix ASNC type D558_RS09750 SM00151 SWI complex, BAF60b domains D558_RS09765 SM00382 ATPases associated with a variety of cellular activities D558_RS09830 SM00842 Cell division protein FtsA D558_RS09860 SM00957 SecA DEAD-like domain D558_RS09860 SM00958 SecA preprotein cross-linking domain D558_RS09880 SM00788 Adenylosuccinate synthetase D558_RS09925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D558_RS09990 SM00014 Acid phosphatase homologues D558_RS10040 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D558_RS10045 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D558_RS10135 SM00448 cheY-homologous receiver domain D558_RS10135 SM00862 Transcriptional regulatory protein, C terminal D558_RS10150 SM00986 Uracil DNA glycosylase superfamily D558_RS10150 SM00987 UreE urease accessory protein, C-terminal domain D558_RS10160 SM00968 SMC proteins Flexible Hinge Domain D558_RS10165 SM00771 ZipA, C-terminal domain (FtsZ-binding) D558_RS10170 SM00278 Helix-hairpin-helix DNA-binding motif class 1 D558_RS10170 SM00292 breast cancer carboxy-terminal domain D558_RS10170 SM00532 Ligase N family D558_RS10175 SM00382 ATPases associated with a variety of cellular activities D558_RS10185 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS10205 SM00382 ATPases associated with a variety of cellular activities D558_RS10230 SM00382 ATPases associated with a variety of cellular activities D558_RS10235 SM00382 ATPases associated with a variety of cellular activities D558_RS10280 SM00478 endonuclease III D558_RS10280 SM00525 D558_RS10280 D558_RS10325 SM00954 Region found in RelA / SpoT proteins D558_RS10375 SM00316 Ribosomal protein S1-like RNA-binding domain D558_RS10380 SM00363 S4 RNA-binding domain D558_RS10400 SM00644 D558_RS10400 D558_RS10435 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. D558_RS10440 SM00822 D558_RS10440 D558_RS10450 SM00825 Beta-ketoacyl synthase D558_RS10475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. D558_RS10505 SM00838 Elongation factor G C-terminus D558_RS10515 SM00358 Double-stranded RNA binding motif D558_RS10515 SM00535 Ribonuclease III family D558_RS10530 SM00267 diguanylate cyclase D558_RS10650 SM00882 Coenzyme A transferase D558_RS10655 SM00882 Coenzyme A transferase D558_RS10670 SM00382 ATPases associated with a variety of cellular activities D558_RS10780 SM00981 D558_RS10780 D558_RS10810 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS10810 SM00866 D558_RS10810 D558_RS10855 SM00382 ATPases associated with a variety of cellular activities D558_RS10890 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. D558_RS10920 SM00861 Transketolase, pyrimidine binding domain D558_RS10950 SM00965 Secretin and TonB N terminus short domain D558_RS10975 SM00316 Ribosomal protein S1-like RNA-binding domain D558_RS10975 SM00732 Likely ribonuclease with RNase H fold. D558_RS10980 SM00487 DEAD-like helicases superfamily D558_RS10980 SM00491 D558_RS10980 D558_RS10990 SM00363 S4 RNA-binding domain D558_RS11005 SM00822 D558_RS11005 D558_RS11040 SM00749 bacterial OsmY and nodulation domain D558_RS11075 SM00382 ATPases associated with a variety of cellular activities D558_RS11105 SM00267 diguanylate cyclase D558_RS11115 SM00822 D558_RS11115 D558_RS11200 SM00434 DNA Topoisomerase IV D558_RS11210 SM00830 Chorismate mutase type II D558_RS11235 SM00316 Ribosomal protein S1-like RNA-binding domain D558_RS11240 SM00411 bacterial (prokaryotic) histone like domain D558_RS11285 SM00893 Electron transfer flavoprotein domain D558_RS11290 SM00893 Electron transfer flavoprotein domain D558_RS11325 SM00382 ATPases associated with a variety of cellular activities D558_RS11345 SM00729 Elongator protein 3, MiaB family, Radical SAM D558_RS11385 SM00479 D558_RS11385 D558_RS11460 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS11460 SM00895 D558_RS11460 D558_RS11500 SM00382 ATPases associated with a variety of cellular activities D558_RS11560 SM00382 ATPases associated with a variety of cellular activities D558_RS11560 SM00487 DEAD-like helicases superfamily D558_RS11560 SM00490 helicase superfamily c-terminal domain D558_RS11560 SM00847 Helicase associated domain (HA2) Add an annotation D558_RS11570 SM00481 DNA polymerase alpha chain like domain D558_RS11615 SM00382 ATPases associated with a variety of cellular activities D558_RS11635 SM00829 Enoylreductase D558_RS11650 SM00450 Rhodanese Homology Domain D558_RS11680 SM00346 helix_turn_helix isocitrate lyase regulation D558_RS11730 SM00382 ATPases associated with a variety of cellular activities D558_RS11745 SM00670 Large family of predicted nucleotide-binding domains D558_RS11800 SM00528 Domain in histone-like proteins of HNS family D558_RS11860 SM01002 Alanine dehydrogenase/PNT, C-terminal domain D558_RS11860 SM01003 Alanine dehydrogenase/PNT, N-terminal domain D558_RS11940 SM00267 diguanylate cyclase D558_RS12030 SM01144 D558_RS12030 D558_RS12040 SM00316 Ribosomal protein S1-like RNA-binding domain D558_RS12040 SM00357 Cold shock protein domain D558_RS12040 SM00955 D558_RS12040 D558_RS12055 SM00411 bacterial (prokaryotic) histone like domain D558_RS12080 SM00448 cheY-homologous receiver domain D558_RS12080 SM00862 Transcriptional regulatory protein, C terminal D558_RS12085 SM00387 Histidine kinase-like ATPases D558_RS12085 SM00388 His Kinase A (phosphoacceptor) domain D558_RS12145 SM01130 D558_RS12145 D558_RS12150 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS12150 SM00895 D558_RS12150 D558_RS12320 SM00357 Cold shock protein domain D558_RS12335 SM01359 D558_RS12335 D558_RS12335 SM01360 D558_RS12335 D558_RS12345 SM00382 ATPases associated with a variety of cellular activities D558_RS12345 SM01086 C-terminal, D2-small domain, of ClpB protein D558_RS12385 SM00382 ATPases associated with a variety of cellular activities D558_RS12390 SM00382 ATPases associated with a variety of cellular activities D558_RS12400 SM00938 Nitrogen regulatory protein P-II D558_RS12425 SM00382 ATPases associated with a variety of cellular activities D558_RS12445 SM00873 B3/4 domain D558_RS12445 SM00874 tRNA synthetase B5 domain D558_RS12445 SM00896 Ferredoxin-fold anticodon binding domain D558_RS12450 SM00411 bacterial (prokaryotic) histone like domain D558_RS12455 SM00422 helix_turn_helix, mercury resistance D558_RS12475 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS12475 SM00895 D558_RS12475 D558_RS12505 SM00357 Cold shock protein domain D558_RS12510 SM00477 DNA/RNA non-specific endonuclease D558_RS12510 SM00892 DNA/RNA non-specific endonuclease D558_RS12535 SM00344 helix_turn_helix ASNC type D558_RS12800 SM00318 Staphylococcal nuclease homologues D558_RS12820 SM00382 ATPases associated with a variety of cellular activities D558_RS12870 SM00387 Histidine kinase-like ATPases D558_RS12875 SM00448 cheY-homologous receiver domain D558_RS12930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) D558_RS12930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D558_RS13020 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D558_RS13045 SM00852 Probable molybdopterin binding domain D558_RS13050 SM00852 Probable molybdopterin binding domain D558_RS13095 SM00100 Cyclic nucleotide-monophosphate binding domain D558_RS13095 SM00419 helix_turn_helix, cAMP Regulatory protein D558_RS13100 SM01119 D558_RS13100 D558_RS13160 SM01005 Alanine racemase, C-terminal domain D558_RS13165 SM00822 D558_RS13165 D558_RS13175 SM00382 ATPases associated with a variety of cellular activities D558_RS13255 SM00833 Cobalamin synthesis protein cobW C-terminal domain D558_RS13275 SM00363 S4 RNA-binding domain D558_RS13285 SM00316 Ribosomal protein S1-like RNA-binding domain D558_RS13305 SM00838 Elongation factor G C-terminus D558_RS13320 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS13320 SM00895 D558_RS13320 D558_RS13365 SM00382 ATPases associated with a variety of cellular activities D558_RS13380 SM00382 ATPases associated with a variety of cellular activities D558_RS13400 SM00862 Transcriptional regulatory protein, C terminal D558_RS13440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 D558_RS13440 SM00465 GIY-YIG type nucleases (URI domain) D558_RS13465 SM00347 helix_turn_helix multiple antibiotic resistance protein D558_RS13475 SM00382 ATPases associated with a variety of cellular activities D558_RS13490 SM00052 Putative diguanylate phosphodiesterase D558_RS13490 SM00267 diguanylate cyclase D558_RS13570 SM00729 Elongator protein 3, MiaB family, Radical SAM D558_RS13570 SM00876 Biotin and Thiamin Synthesis associated domain D558_RS13590 SM00014 Acid phosphatase homologues D558_RS13595 SM00729 Elongator protein 3, MiaB family, Radical SAM D558_RS13610 SM01091 Transporter associated domain D558_RS13650 SM01323 D558_RS13650 D558_RS13725 SM00919 Malic enzyme, NAD binding domain D558_RS13725 SM01274 D558_RS13725 D558_RS13745 SM00861 Transketolase, pyrimidine binding domain D558_RS13750 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D558_RS13805 SM00271 DnaJ molecular chaperone homology domain D558_RS13830 SM00852 Probable molybdopterin binding domain D558_RS13850 SM00316 Ribosomal protein S1-like RNA-binding domain D558_RS13920 SM01001 AIR carboxylase D558_RS13945 SM00342 helix_turn_helix, arabinose operon control protein D558_RS13960 SM01007 Class II Aldolase and Adducin N-terminal domain D558_RS14035 SM00493 D558_RS14035 D558_RS14050 SM00382 ATPases associated with a variety of cellular activities D558_RS14065 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain D558_RS14070 SM00851 MGS-like domain D558_RS14070 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D558_RS14080 SM00822 D558_RS14080 D558_RS14085 SM00855 Phosphoglycerate mutase family D558_RS14120 SM00530 Helix-turn-helix XRE-family like proteins D558_RS14135 SM01103 D558_RS14135 D558_RS14145 SM00382 ATPases associated with a variety of cellular activities D558_RS14185 SM00382 ATPases associated with a variety of cellular activities D558_RS14210 SM00382 ATPases associated with a variety of cellular activities D558_RS14255 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS14310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D558_RS14310 SM00387 Histidine kinase-like ATPases D558_RS14310 SM00388 His Kinase A (phosphoacceptor) domain D558_RS14315 SM00448 cheY-homologous receiver domain D558_RS14315 SM00862 Transcriptional regulatory protein, C terminal D558_RS14320 SM00382 ATPases associated with a variety of cellular activities D558_RS14355 SM00881 CoA binding domain D558_RS14415 SM00382 ATPases associated with a variety of cellular activities D558_RS14415 SM00464 Found in ATP-dependent protease La (LON) D558_RS14455 SM00858 D558_RS14455 D558_RS14465 SM00240 Forkhead associated domain D558_RS14510 SM00116 Domain in cystathionine beta-synthase and other proteins. D558_RS14530 SM00448 cheY-homologous receiver domain D558_RS14530 SM00862 Transcriptional regulatory protein, C terminal D558_RS14535 SM00052 Putative diguanylate phosphodiesterase D558_RS14535 SM00267 diguanylate cyclase D558_RS14535 SM00387 Histidine kinase-like ATPases D558_RS14535 SM00388 His Kinase A (phosphoacceptor) domain D558_RS14540 SM00052 Putative diguanylate phosphodiesterase D558_RS14555 SM00421 helix_turn_helix, Lux Regulon D558_RS14595 SM01329 D558_RS14595 D558_RS14600 SM00859 Semialdehyde dehydrogenase, NAD binding domain D558_RS14605 SM00257 Lysin motif D558_RS14660 SM00729 Elongator protein 3, MiaB family, Radical SAM D558_RS14665 SM00421 helix_turn_helix, Lux Regulon D558_RS14665 SM00448 cheY-homologous receiver domain D558_RS14670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain D558_RS14720 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS14775 SM00344 helix_turn_helix ASNC type D558_RS14815 SM00904 Riboflavin kinase D558_RS14860 SM00382 ATPases associated with a variety of cellular activities D558_RS14915 SM00382 ATPases associated with a variety of cellular activities D558_RS15040 SM00052 Putative diguanylate phosphodiesterase D558_RS15040 SM00267 diguanylate cyclase D558_RS15050 SM00342 helix_turn_helix, arabinose operon control protein D558_RS15110 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) D558_RS15110 SM00091 PAS domain D558_RS15110 SM00387 Histidine kinase-like ATPases D558_RS15110 SM00388 His Kinase A (phosphoacceptor) domain D558_RS15115 SM00421 helix_turn_helix, Lux Regulon D558_RS15115 SM00448 cheY-homologous receiver domain D558_RS15185 SM01322 D558_RS15185 D558_RS15205 SM00382 ATPases associated with a variety of cellular activities D558_RS15265 SM00316 Ribosomal protein S1-like RNA-binding domain D558_RS15265 SM00322 K homology RNA-binding domain D558_RS15270 SM01387 D558_RS15270 D558_RS15355 SM01006 Siderophore biosynthesis protein domain D558_RS15375 SM00342 helix_turn_helix, arabinose operon control protein D558_RS15435 SM00965 Secretin and TonB N terminus short domain D558_RS15465 SM00990 D558_RS15465 D558_RS15475 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen D558_RS15500 SM00382 ATPases associated with a variety of cellular activities D558_RS15515 SM00822 D558_RS15515 D558_RS15600 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D558_RS15625 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS15625 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. D558_RS15630 SM00346 helix_turn_helix isocitrate lyase regulation D558_RS15635 SM00248 ankyrin repeats D558_RS15735 SM00267 diguanylate cyclase D558_RS15745 SM00244 prohibitin homologues D558_RS15805 SM00935 Outer membrane protein (OmpH-like) D558_RS15860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D558_RS16025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D558_RS16025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D558_RS16035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D558_RS16035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D558_RS16085 SM00342 helix_turn_helix, arabinose operon control protein D558_RS16125 SM00382 ATPases associated with a variety of cellular activities D558_RS16135 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS16140 SM00867 YceI-like domain D558_RS16165 SM00382 ATPases associated with a variety of cellular activities D558_RS16195 SM01091 Transporter associated domain D558_RS16205 SM00421 helix_turn_helix, Lux Regulon D558_RS16205 SM00448 cheY-homologous receiver domain D558_RS16210 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS16210 SM00073 Histidine Phosphotransfer domain D558_RS16210 SM00091 PAS domain D558_RS16210 SM00387 Histidine kinase-like ATPases D558_RS16210 SM00388 His Kinase A (phosphoacceptor) domain D558_RS16210 SM00448 cheY-homologous receiver domain D558_RS16250 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS16250 SM00895 D558_RS16250 D558_RS16345 SM00382 ATPases associated with a variety of cellular activities D558_RS16350 SM00382 ATPases associated with a variety of cellular activities D558_RS16395 SM00382 ATPases associated with a variety of cellular activities D558_RS16415 SM00984 UDP binding domain D558_RS16440 SM00382 ATPases associated with a variety of cellular activities D558_RS16465 SM00028 Tetratricopeptide repeats D558_RS16480 SM00487 DEAD-like helicases superfamily D558_RS16480 SM00490 helicase superfamily c-terminal domain D558_RS16515 SM00382 ATPases associated with a variety of cellular activities D558_RS16535 SM00382 ATPases associated with a variety of cellular activities D558_RS16535 SM00448 cheY-homologous receiver domain D558_RS16540 SM00091 PAS domain D558_RS16540 SM00387 Histidine kinase-like ATPases D558_RS16540 SM00388 His Kinase A (phosphoacceptor) domain D558_RS16545 SM01230 D558_RS16545 D558_RS16550 SM00729 Elongator protein 3, MiaB family, Radical SAM D558_RS16560 SM00052 Putative diguanylate phosphodiesterase D558_RS16560 SM00267 diguanylate cyclase D558_RS16565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). D558_RS16565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain D558_RS16625 SM00072 Guanylate kinase homologues. D558_RS16630 SM01409 D558_RS16630 D558_RS16635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. D558_RS16635 SM00954 Region found in RelA / SpoT proteins D558_RS16650 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS16650 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. D558_RS16745 SM00422 helix_turn_helix, mercury resistance D558_RS16780 SM00257 Lysin motif D558_RS16795 SM01207 D558_RS16795 D558_RS16855 SM00062 Bacterial periplasmic substrate-binding proteins D558_RS16870 SM00382 ATPases associated with a variety of cellular activities D558_RS16960 SM00344 helix_turn_helix ASNC type D558_RS16985 SM00420 helix_turn_helix, Deoxyribose operon repressor D558_RS16985 SM01134 D558_RS16985 D558_RS17015 SM00382 ATPases associated with a variety of cellular activities D558_RS17100 SM00481 DNA polymerase alpha chain like domain D558_RS17105 SM00986 Uracil DNA glycosylase superfamily D558_RS17105 SM00987 UreE urease accessory protein, C-terminal domain D558_RS17115 SM00382 ATPases associated with a variety of cellular activities D558_RS17150 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS17185 SM00464 Found in ATP-dependent protease La (LON) D558_RS17190 SM00342 helix_turn_helix, arabinose operon control protein D558_RS17225 SM00530 Helix-turn-helix XRE-family like proteins D558_RS17280 SM00342 helix_turn_helix, arabinose operon control protein D558_RS17290 SM00342 helix_turn_helix, arabinose operon control protein D558_RS17320 SM00382 ATPases associated with a variety of cellular activities D558_RS17380 SM00342 helix_turn_helix, arabinose operon control protein D558_RS17385 SM00014 Acid phosphatase homologues D558_RS17400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor D558_RS17405 SM00822 D558_RS17405 D558_RS17450 SM00116 Domain in cystathionine beta-synthase and other proteins. D558_RS17450 SM01240 D558_RS17450 D558_RS17510 SM00382 ATPases associated with a variety of cellular activities D558_RS17670 SM00849 Metallo-beta-lactamase superfamily D558_RS17750 SM00382 ATPases associated with a variety of cellular activities D558_RS17770 SM00937 D558_RS17770 D558_RS17805 SM00965 Secretin and TonB N terminus short domain D558_RS17815 SM00382 ATPases associated with a variety of cellular activities D558_RS17850 SM00271 DnaJ molecular chaperone homology domain D558_RS17875 SM00226 Low molecular weight phosphatase family D558_RS17880 SM00487 DEAD-like helicases superfamily D558_RS17880 SM00490 helicase superfamily c-terminal domain D558_RS17930 SM00829 Enoylreductase D558_RS17950 SM00382 ATPases associated with a variety of cellular activities D558_RS17950 SM00464 Found in ATP-dependent protease La (LON) D558_RS17955 SM00382 ATPases associated with a variety of cellular activities D558_RS17955 SM00994 ClpX C4-type zinc finger D558_RS17955 SM01086 C-terminal, D2-small domain, of ClpB protein D558_RS17990 SM00382 ATPases associated with a variety of cellular activities D558_RS18005 SM00357 Cold shock protein domain D558_RS18070 SM00965 Secretin and TonB N terminus short domain D558_RS18095 SM00267 diguanylate cyclase D558_RS18140 SM01034 Sensors of blue-light using FAD D558_RS18195 SM00345 helix_turn_helix gluconate operon transcriptional repressor D558_RS18235 SM00052 Putative diguanylate phosphodiesterase