D558_RS00040 NONE
D558_RS00045    7921 ..    7940 +  -2.1  -5.24129   CATAGAAAAAAATCG            TGTGTCA CGGCTT TGACACC             TTTTTTATAAAAAAC  80 242
D558_RS00050    9672 ..    9683 +  -4.4  -3.28416   GAATAGATGAGACGA                TCGA AGAT TCGA                 TTGCTGTACCTCATC  49 146
D558_RS00055   11628 ..   11652 +  -4.2  -3.27951   GCCGGCGTTAAATAT         CCGAGCGCGCT GTGA GGC-CGATCGG          TGTTGTACTCGACTC  47 419
D558_RS00070   13662 ..   13672 +    -4    -4.564   GCTTGGAAAGTCGAT                 TCAT GCG ATGA                 TTTTAGTTTGCCCTT  70 93
D558_RS00075 NONE
D558_RS00080   15169 ..   15181 +  -9.1  -3.13403   GCTGGCCAACGGTTC                GCAGC AAG GCTGC                TCTTGATACCCGGCA  60 7
D558_RS00085 NONE
D558_RS00090 NONE
        emrB   19557 ..   19574 + -11.3  -3.61517   ACTGCCCCCCAATAA             GCTGGAC CTAG GTCCAGC              TTATTGGGGGGCAGT  74 70
D558_RS00110   21613 ..   21638 +  -4.5   -3.4072   GCACGTTGCGCATCC         GGGCCGCAGTG CCCG CGCCGCGCTCC          TTGTCATACCGACTC  51 102
D558_RS00115 NONE
D558_RS00125   25529 ..   25555 +  -2.8  -3.53012   CCGCAATGCCGACTT         GGCCGCGGTCTG CAC CACACCGTCGCG         TTTGCCACCGCGCGG  49 411
D558_RS00135   27853 ..   27882 + -20.7  -3.06696   GCGCAGTAGTGACAC       CGCCCGTCACGGC ACCC GCCGGGACGGGCG        TCTATTCCGACGGGA 100 32
D558_RS00140 NONE
D558_RS00145   30148 ..   30160 +  -3.3  -3.12351   AGTTGGCCGCCTTTC                TCACG CCC CGGGA                TTGGGTGTGAAGCAA  43 3
D558_RS00150   30749 ..   30766 +  -9.1  -4.06997   AGCACGGTCTCTACC             TTGCCGC CTGA GCGGCGA              TCTTTCTTTTTACTC  75 15
D558_RS00155 NONE
D558_RS00160 NONE
D558_RS00165   32302 ..   32324 + -10.5  -2.58243   TTGCCCTGAAAAAAA           ACACCGGGG CTTGC CCCCGGTGC           CTGTCTTCTTCTGGC  62 32
D558_RS00175 NONE
D558_RS00180   37453 ..   37471 +  -8.8  -2.62735   TTGACCGTCACAATG             TCCGTCAC GTC GCGACGGA             TGATCTCGAAGGTGT  53 216
D558_RS00200   40972 ..   40991 +  -4.3  -2.96271   ACATCAAGCCCCGGC            TGCGC-CA TGGCC TGCGCGCA            TGATTTGCCATTTGT  44 151
D558_RS00205   42681 ..   42699 +    -3  -4.18018   CAGATCGGGCCCGGC             TGTCGTCG CCA CAGCGGCA             TTTTCCATAAGCAGC  60 175
D558_RS00225 NONE
D558_RS00230 NONE
D558_RS00235 NONE
D558_RS00240   47922 ..   47944 + -19.2  -3.59262   GCGCCAAAAGAGAAA           GCCCGCAAGC ATG GCTTGCGGGC           TTTGCAGATATGGCG 100 50
D558_RS00250   49432 ..   49449 +  -8.5  -3.79623   AGGGTTTGCCCCAAA             TGATACC GATA GGTATCA              TTTCGTCGGATTTTT  72 65
D558_RS00255 NONE
D558_RS00260 NONE
D558_RS00265   54974 ..   54988 +  -5.6  -2.57344   CCGATATCCCAGGCA               GTCGGC TGC GCGGAC               ATTGTCGCCAGGCTG  45 330
D558_RS00275   56696 ..   56719 + -18.2   -3.1855   TGCGCCAAATGAAAA          GGCCCGCGAT AAAA ATCGCGGGCC           TTAAATCTTGGCGGA 100 58
D558_RS00310   63343 ..   63363 + -10.3  -2.87051   TTTCTCGCATCAAGC            CGCTGGGCC AGT GGGCCGGCG            CTTTCCTGCTGGCGA  64 50
D558_RS00315   63938 ..   63948 +  -2.4  -3.06796   CGTGATCATCGAGAA                 GGCC GAA GTCC                 TTGAATAAGCTGGCA  41 7
D558_RS00320   64767 ..   64797 + -22.7  -4.86621   AAGGTGCCCAAAAAA       GCCTGAACCCGGC GCGTG GCCGGGTTCAGGC       TTTTTAGTTGGAGCT 100 73
D558_RS00340   69452 ..   69463 +  -2.2  -4.56597   TCCGATCGCCCCCAG                GCTT TCAT AGGC                 TTTTTGCACGGAAGG  67 239
D558_RS00350   71588 ..   71613 + -11.1  -2.94695   GATGATCACCGGGAT         GTCGCAACGGC GATT GACGTTGCGGC          TGTAGTTGGTGATGG  65 345
D558_RS00380   78425 ..   78435 +  -3.2  -3.09516   GACGTGGCCAGCATG                 CTCT ACA AGGG                 TTGAGTCATGAGCAC  43 11
D558_RS00385 NONE
D558_RS00390 NONE
D558_RS00395 NONE
D558_RS00400 NONE
D558_RS00405   82730 ..   82741 +  -2.2  -2.94924   AGAAAGCCAGGAAAA                CC-GG CCG CCAGG                GTTTCTCCCTGGCGC  41 452
D558_RS00415 NONE
D558_RS00420   84450 ..   84484 + -17.1  -4.38712   CAGGACACTGACGGC     CGCCACGGGCCGTCG CCGCT CGACGACCCGTGGCC     TTTTATCCCCGTGCA 100 464
D558_RS00435   87398 ..   87414 +    -8  -3.27525   CGTGGCGGCAAGCCG              GGCTTG ACCGG CAAGCC              TTGAATTTCGCCCGA  59 385
D558_RS00445 NONE
D558_RS00450   91867 ..   91880 +  -2.3  -3.60865   AAGCGCCTGACAGTT               TCCTG TAGC CTGGA                TTCTGGTTTCCCCTA  47 198
D558_RS00480   96675 ..   96689 +  -3.5  -4.84017   GCTCGCACATAAAAC               CCGCA TACTT TGTGG               TTTTTCTAGCCAGTT  73 49
D558_RS00485 NONE
D558_RS00490   98518 ..   98532 +  -4.2  -2.59431   CTCGCGCGCCACCTT               TGCCGT CAG GCGGTA               TCCCTTGTAAACCGA  41 251
D558_RS00510  101202 ..  101218 + -13.7  -5.81412   AAGCACCCGGACGCT              GCGGCCT GCA AGGCCGC              TTTTTTTTGCGTCAG 100 50
D558_RS00535  106352 ..  106400 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS00560 NONE
D558_RS00565  110453 ..  110470 +  -5.5  -2.71144   CCGCCGCTTGGCCTT             ACAAGCG GTTG CGCTTGC              TGCTTCGGGCAGATG  47 41
D558_RS00570 NONE
D558_RS00575  112607 ..  112626 +  -3.5  -3.37017   AGCCCTGGAGGCAAG            CCTCCAG GGCCAA CTCGAGG             TTCCTATTGCGAATT  47 110
D558_RS00585  114453 ..  114467 +  -4.2  -3.65351   CGTCGACCCTGAGCC               TCGTGC TCG GCACCA               TTTACGTAACGCTGA  53 391
D558_RS00595 NONE
D558_RS00600  119636 ..  119693 +  -3.7   -3.4582   ACTTTCCAGATCCAA TCCGCCTACACTTATTTGTACGAA CAAATGATCAA TACATACAAATAAGTG-AGGAGGA TGTTTCATGCAGTCA  49 108
D558_RS00605 NONE
D558_RS00610 NONE
D558_RS00615 NONE
D558_RS00620 NONE
D558_RS00625 NONE
D558_RS00630 NONE
D558_RS00635  126800 ..  126819 +  -2.9  -4.07568   CGCGCCGACCTGCGC            CCAA-CTG CCCCC CAGCTTGG            TTTTGAGCAGCACCG  60 147
D558_RS00660 NONE
D558_RS00665 NONE
D558_RS00670  137744 ..  137792 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS00675  138482 ..  138495 +  -3.1  -3.14931   ACGGCGTTCGCGACT               CAGAC CATC GTTTG                TTCCTGAGCGCTGCC  43 261
D558_RS00680  139403 ..  139427 +  -9.9  -4.67234   GCGGGCAACAAAAAA          CCCGCGTCTCT AAG AGAATCGCGGG          TTTTTGCAATTGCGT  87 65
D558_RS00710  144017 ..  144029 +  -6.2  -3.32984   TGCCGCCGGCCATTG                CCGG AAAAG CCGG                TGTTCTCCGTTTTCC  53 282
D558_RS00740  150513 ..  150536 + -18.2  -4.63218   TCAAACCCAATAAAA          CAACGGCGCC CTTG GGCGCCGTTG           TTTTATTGGCCAGGC 100 28
D558_RS00760  153519 ..  153539 +  -9.8  -5.60993   CCAATTCTCTGCCAA            TAGACCTC AACAC GAGGTCTA            TTTTTTTATCCGAAA 100 413
D558_RS00775  156567 ..  156582 + -11.8  -3.72576   TGAACCCAAAAAAAA              CGCCGC GGAT GCGGCG               TTTCCTGGCAAACCG  81 38
D558_RS00795  161514 ..  161546 + -18.6  -4.09685   CACGTTCGGCGCAAT     GCAAAGTGGGCCCCA CACG TGGGGCCCACTT-GC      TTTTCAGACCTCGGG 100 44
D558_RS00810  165157 ..  165170 +  -3.7  -2.73972   GATACATCACGCGCA               GCAGC GCGA GCGGC                GTTCATGTTTTGTCG  43 46
D558_RS00815  166401 ..  166411 +  -8.2  -2.73875   GCAGGGTCAGGGCAG                 CGCC ACG GGCG                 TCGTGTTCGGCCAGC  53 361
D558_RS00860  175007 ..  175030 +  -6.6  -4.25458   CCACCCCAAACGAAA          GCCCTATCGC GTTG GCCACAGGGC           TTTGTTGCTGGCGTT  72 314
D558_RS00890  178063 ..  178100 +  -9.8  -3.05384   CTGGCGCATAACGGC   CCGCGGGCCGGTCAGCC TTCCT GGCTGA-TGACCGGCGG   TTCGATCCAGAAAAA  64 30
D558_RS00895  178856 ..  178902 +    -3  -3.05384   TTGATCCTCGTGGCG GACGGGCCACGCAAGGTGTGG AAATGTAA CCCCACCT-G-G-GGCCCGCC TTGGCTCCCCCCGCG  43 37
D558_RS00900  179363 ..  179382 +  -4.8  -5.40072   GCAAATCAATGAAAA            AACCGCCC GGAT GGGCGGCC             TTTTTTTGCGGCACG  90 53
D558_RS00930 NONE
D558_RS00935 NONE
D558_RS00940  187952 ..  187962 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 77
D558_RS00945  189189 ..  189228 +  -3.5  -4.15044   CCATGTAGGCGAAGG TGGCG-GCCA-GCCCGGCA AACA TGCCCAGCGTGGCGCCCCA  TTTGTTGGCGCGCCG  60 249
D558_RS00960 NONE
D558_RS00965  196095 ..  196120 +  -6.7  -2.77523   CTCCGCTTCCCCCCG         CC-GGGCGCCCC TGC GCGCCGCCCTGG         TGATCTTCCTGGCGC  49 64
D558_RS00970  196656 ..  196676 +  -6.7   -2.8655   CCTGGCGCTGGACCG            CCTGCGCTG AAG CGGCGCGCG            TATAGTATGCGTGCC  51 16
D558_RS00975 NONE
D558_RS00980  200598 ..  200611 +  -6.7  -3.37071   CGGTATAGCGCTGTA               GATCC GTCA GGATC                TTGTGCATCCGGTTT  55 501
D558_RS01000  204617 ..  204635 + -11.6  -3.14132   GGATCGGGGGCTTGC             CCGGCGCC GCC GGCGCCGC             TTACTGGCGCACGCC  69 57
D558_RS01015 NONE
D558_RS01020  207864 ..  207917 +  -4.5  -3.73775   AGGCCACGCGGCTTT GCGCCTGCCGCGTCGCCG-CCAGG-GC CACG GCTCCCGGACAGCGGCGC--CAGGCGA TTTCATCGCCGTCCA  56 239
D558_RS01035  211376 ..  211405 + -22.3  -2.62616   GACATCCGCGACAGA       GTGTGCCTGTCCC CGCT GGGACAGGCACAC        TGCTCTACGCCATGA 100 97
        ppnK  219240 ..  219250 +  -2.4  -3.06815   GAGTAATCCATCCCG                 GCAG CGC CCGC                 TATGTTGCGAACCCT  41 35
D558_RS01080  220946 ..  220959 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 64
D558_RS01085  221805 ..  221829 +  -4.2  -3.27951   GCCGGCGTTAAATAT         CCGAGCGCGCT GTGA GGC-CGATCGG          TGTTGTACTCGACTC  47 138
D558_RS01100  223523 ..  223539 + -10.8  -3.05384   TGAACCACAAAAAAA              CCCGGC ACGAG GCCGGG              TTCAGTGCGGCACCA  66 38
D558_RS01110 NONE
D558_RS01115  225568 ..  225597 + -22.3  -3.87075   CCCTGATACGCCAAA       GCAAGAAGCCGGC ACGC GCCGGCTTCTTGC        TTTGTGGACGGTCAT 100 42
D558_RS01125  227022 ..  227042 +  -2.5  -2.78463   AGCTGTGGCGCCGTC            GTGGGTTGT AGA ACAACTCGA            TATAGTCAAACACAT  38 137
D558_RS01135  227881 ..  227929 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS01140  228831 ..  228854 +  -8.1   -3.5511   ACATCGTTCGCTTTG          CCGCATGAG TAACGC CTCACGCGG           TGTTTCTCACTCACC  62 473
D558_RS01145  229624 ..  229646 +  -7.6   -2.7464   GACCGTCGCGTATAA           GACGACGGCT TGC AGCCGTGGCC           GTTTGGCACTACATT  54 97
D558_RS01150 NONE
D558_RS01155 NONE
D558_RS01160  234307 ..  234324 +  -8.3  -4.67641   TGAGCACGCTCAAGA             AGGCGGC GACG GCCGCCC              TTTTGCTTTTCAACT  83 38
D558_RS01165  235401 ..  235414 +  -3.1  -4.67011   GGTCAGCCCGATGAT               GC-GCA ACT TGCCGC               TTTTTGCGTAGGCTT  72 463
D558_RS01180  237316 ..  237350 +  -4.1  -2.79183   CCCGATGATTGCCAG    CGGGGCTGCCCCGTGC AGAC GC-CAGAGCAGCTCGG     TATCGTCGCGCTGCG  43 376
D558_RS01200 NONE
D558_RS01205 NONE
D558_RS01210 NONE
D558_RS01215 NONE
D558_RS01220  245503 ..  245532 +  -2.8   -5.4505   CTCCAAATTCAAAAG       GGAAGCTTAAGGC ATCTA GCCCTT-GCTTCC       TTTTTTCTTGCAGCA  85 36
D558_RS01225  245644 ..  245669 +    -9  -5.27335   CCTCCAAATTCAACC         CCCCGTTACGG TAGAT CCG-GACGGGG         TTTTTGTTTGGACGG 100 34
D558_RS01230 NONE
D558_RS01235  247130 ..  247142 +  -4.8  -3.33261   GAGTCGCATTCGAGA                TGCG ATGGC CGCA                TTCTGGCGGTTCCAA  51 444
D558_RS01245 NONE
D558_RS01250 NONE
D558_RS01255 NONE
D558_RS01260  250214 ..  250230 +  -3.6   -2.7127   CTCCATATCGATGGC              CAGTGG CGCGC CCCCTG              ATTCTGCTTGGCTCG  43 8
D558_RS01265  251373 ..  251386 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 69
D558_RS01270 NONE
D558_RS01275  252957 ..  253005 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS01280 NONE
D558_RS01285  253872 ..  253892 + -18.3  -3.35371   ATGAACCAAAAAAAA            GGCCACCCG TAT CGGGTGGCC            TTAATTCCAGCTCTG 100 37
D558_RS01300  257274 ..  257298 + -13.6  -4.72272   CGCTTTACCCATGAA          CAGCCTCTGC TCTGC GCAGGGGCTG          TTTTTCCTGGGAGGC 100 57
D558_RS01320  260712 ..  260725 +  -8.1  -2.72855   CCTTCGCGGTTCTCG               CGCGA GCCG TCGCG                TCCTTCCCGGCTTTC  51 328
D558_RS01340 NONE
D558_RS01345 NONE
D558_RS01350  265519 ..  265537 +  -6.7  -3.25088   TATCGCGCCGCGCCT            CG-ACGGG GTGG CCCGTGCG             TTCCTGGCTTTGCGC  54 229
D558_RS01360 NONE
D558_RS01395  274159 ..  274181 +  -5.4  -2.66291   AACCCCGCGATGACT           TTGCTGCGCG GCG CGTGCGGCCG           TGCTGTCAGTGTCTG  46 432
D558_RS01405  275489 ..  275499 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 60
D558_RS01410 NONE
D558_RS01415 NONE
D558_RS01420 NONE
D558_RS01425 NONE
        purH  279589 ..  279612 +  -3.1  -2.79183   TGGTCCTGACCGGTA          CGCGTCACT TCCGTC ACTGATGCG           TGTCCTCGGCATCGA  41 6
D558_RS01435  280191 ..  280201 +  -3.2  -4.45544   CTGCCGGCCTGGCGC                 GACG CAA TGTC                 TTTTCATTCCTACAG  66 63
D558_RS01440  280795 ..  280812 +  -9.1  -4.13814   CGCCAGGCGCTCAAG             GCCCTGG CGCG CTAGGGC              TTATTTATCGATTTT  78 11
D558_RS01455  283420 ..  283434 +  -2.1  -4.07568   CATGGTCATGCTGGC              GC-GTG CGAT CACTGC               TTTTACCACGCAGGA  58 507
        ompR  286991 ..  287001 +  -3.2  -3.31144   AGACCGTCTGGGGTA                 TCGG CTA TCGA                 TTCTCGCCCTGAGCG  45 3
D558_RS01475  288773 ..  288786 +  -3.1  -3.64703   ACAAAGGGCATCCAG               GC-GAC GCG GTCCGC               TTTGCCTGGCAGGCG  51 294
D558_RS01490  292811 ..  292829 + -13.8  -3.32844   CGCCCCTTCGCGCAG             CGCCCCCG CCC TGGGGGCG             TTGTCGCATCCGGAC  83 51
        minC  293836 ..  293861 +  -6.2  -3.59979   GGCTCCCACACACTT         GTAAGAAGCC ATTAAG GGCTTTTTGC          TTTACGATAACGCGA  58 50
D558_RS01500 NONE
D558_RS01505  295052 ..  295065 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 81
D558_RS01510  296350 ..  296372 + -16.3  -5.71712   ATGAACCCAAAAAAA           GCCCTGCGC ATGCC GCGCAGGGC           TTTTTTTGTATGGGG 100 37
D558_RS01535  300767 ..  300801 +  -9.9  -4.07687   GCAGGCCACGATGAC    GC-CGGCGCCAGCCGGC AAG GCCTGC-GGCGCCTCGC    TTTTGCAACGCGCAT  76 88
D558_RS01570  308576 ..  308613 +  -5.3   -3.3422   CCCGACTCCTCCTCC   CACTGAGGCGGGCAGGC CCGC GCACGGCCGCCTCAACG    CTTTTTCCGCAGATG  53 20
D558_RS01595  314519 ..  314541 +  -7.6  -3.16191   TAAAGGCCACCACCT           GCGCGCCCAT CGC ATGCGCGAGC           TTGATACCCATATGA  55 486
D558_RS01605 NONE
D558_RS01610 NONE
D558_RS01615  317938 ..  317996 + -10.4  -2.59564   CAGACGACGGGGCCC CCTC-C-A-AGAGCATGAGCAGGAGCCGC GACG GCAGCTCCTGCTCGTGCTCCATCGAGCGG ATTCTGGCCTGCCGG  62 65
D558_RS01620 NONE
D558_RS01625  320253 ..  320283 +  -8.2   -2.7044   TATGTCCCCAGAGGC       TGCAGGCGTTGATC GAT GGCCGGTGCCTGCA       TGGTCTGGTTGACTG  53 155
D558_RS01655  329481 ..  329499 + -10.2  -3.65351   TCGCCAGGGCTAGGC             CGACCCGC CGG GCCGGTCG             TTTGCCTCGGCATGG  75 28
D558_RS01670 NONE
D558_RS01675 NONE
D558_RS01680 NONE
D558_RS01685  338364 ..  338394 +  -7.5  -3.13722   GGCAGGCGATTGGTA       GGCCGCACTGGTG GAAGG CACCATTCTGGCC       TTCGGTGGTCTCTTT  54 25
D558_RS01690 NONE
D558_RS01695  339313 ..  339355 +  -8.3  -3.28712   GTGCGCGACCTGAAG CGCCGAGGC-G-ATCCGCGCC ATG GCCGCGGGTGCTGCGGCGGCG TTATACGCCAGCGCA  59 249
D558_RS01710  342241 ..  342252 +  -7.2  -2.71731   CGCCGCGGCCACCAC                GCCG CCCT CGGC                 TGCTTAAGCGCTGCC  51 7
D558_RS01715  344225 ..  344241 +  -5.1  -4.81752   TTTCATGGGCCACAT              CAAGCTG TAG CAGGTTG              TTTTTCGCTGTTTTT  76 16
D558_RS01720  346696 ..  346722 + -20.9  -2.66964   GGCAATAGAGCGGGG         TGCCGCCCGGG CCTGA CCCGGGCGGCA         TGGTCTCCTCCATCG 100 33
D558_RS01725  348288 ..  348314 + -14.5  -3.35679   CATTGAGCGGACGAA         GGCCCGGTTTT GTACA AAGACCGGGCC         TTCTCGCTGACGGGC  87 54
D558_RS01730 NONE
D558_RS01735  349042 ..  349090 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS01740 NONE
D558_RS01745 NONE
       groEL  351774 ..  351804 + -15.5  -4.37658   TTCTCCGGTTGCTAT       CAGAACCCCCGGT TCATC GCCGGGGGTTTTG       TTTTGTGGGCGGCTT 100 86
D558_RS01755  352872 ..  352886 +  -4.2  -2.94924   AAAAAGCGGCAGACC               CGATTC CCC GTATCG               CTTTATGACTCCACA  44 105
D558_RS01760 NONE
D558_RS01765 NONE
        pyrF  355953 ..  355988 +    -3  -3.61398   GGATTCTGCCGTGCC    CAGGTACCAGCCCTGC TCTT GCAGCACCGGTCCCAG     TTGTTCGGCCAGCCC  51 491
D558_RS01805 NONE
D558_RS01810  361577 ..  361588 +  -7.2  -4.12188   GCCTGACCGGAAAAG                GGGG AGTT CCCC                 TTTTCCGCCTGCTGC  71 35
D558_RS01830 NONE
D558_RS01835  367726 ..  367740 +  -7.1  -3.15544   CGACCTTTTGCCCTG               CCGTG GCAGG CACGG               TTGCTGGCGGTGGCG  54 64
D558_RS01840 NONE
D558_RS01845  369394 ..  369413 +   -15  -4.72272   CGCCTGATGGATATA            TGCCGCCC CCAG GGGCGGCA             TTTTTCATCACCAAG 100 51
D558_RS01850  371347 ..  371380 +  -3.7  -4.36914   TGCCGGCGGCCACGG     CGGCCAGGGTGCCGCC CTT GGCGGTACCGTC-CAG     TTTTGTCACGACCAG  69 218
D558_RS01860 NONE
D558_RS01865  373727 ..  373739 +  -3.3  -2.52516   TCCAGTCCCTCGCCC                GCCCT GCC ATGGC                CTTACTCATCACCGA  39 75
D558_RS01870 NONE
D558_RS01875  375627 ..  375640 +  -3.1  -2.85437   CATTTTTGCCGGACT               TGCCGC CCA GCG-CA               TCCTTGATCTTGCTC  41 455
D558_RS01890  378992 ..  379018 +  -2.8  -2.78384   ACATCATGCCTATCC         CATCTGCCAGGA TGC TCCTGGCGGCGA         TGTGCTGCACGCCAG  41 112
D558_RS01895 NONE
D558_RS01900 NONE
D558_RS01905 NONE
D558_RS01915 NONE
D558_RS01920 NONE
D558_RS01925  387295 ..  387309 +  -4.2   -3.0634   TGACACCTGCTGCGA               GGCATC ATG GATACC               TATTCCAATCCGCTT  45 38
D558_RS01930 NONE
D558_RS01935 NONE
D558_RS01940  391629 ..  391661 +  -9.8  -2.70932   ACGCCTGCCTCGGAC     ACGGGCGCG-GCCTT GGGG AAGGCGCGCGCCGGC      TCCTTGCCGCCGACG  61 234
D558_RS01955  395412 ..  395422 +  -8.2  -2.56477   GTGTTAAGCAAATTA                 CCGC TGC GCGG                 ATATTCATATGTTTT  53 153
D558_RS01960  396124 ..  396137 +  -4.5  -4.09739   CGACGGCTTGCGCGA               TGTGG TCGC CCACG                TTTTGCCGGAATTGA  62 213
D558_RS01970  397408 ..  397423 +  -4.6  -3.55563   GCGTGAGGCTGGCAC              GAACGC CCCA GCGATC               TTTAGGAAATGCAAT  53 35
D558_RS01975 NONE
D558_RS01980  400540 ..  400560 +  -8.3  -3.12999   GCCCTCGGGACGCAC            CACTTCGGG CGC CTTGAAGTG            TTCGCTGTGCACTGC  57 374
D558_RS02000  404051 ..  404061 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 60
D558_RS02005  405186 ..  405199 +  -4.5  -3.22102   CACCAGTGCGATCAC               GC-CCG CCC CGGTGC               TGTTGTGCGCCGTCT  47 147
D558_RS02020  408495 ..  408528 +  -7.9  -3.44527   TACCTATCGGCACGA     CGCGGCCTCAGCGCG CATG CGTATCGCGGCCGCG      TTGTGCTCCTGCCTA  61 70
D558_RS02090 NONE
D558_RS02095  422862 ..  422873 +  -3.6  -3.51232   GGAAGCAGCTCGAAG                GCTG AGTC CGGC                 TTGATTTCCCCGGCG  51 21
D558_RS02100 NONE
D558_RS02105  423781 ..  423793 +  -3.3  -3.71873   GTCACCCGTAAAGGA                GGCCT TCC ATGCC                TTTGAATCTGAATGC  52 30
D558_RS02110  424028 ..  424079 +   -16  -2.72511   GATGATGAGGGTACG CAACCATTGATTGGCGCCGTCGCGT TGA AAGCGGCGGTGCCAGTAAA-GGTTG GTTTGCAGCGATGCC  78 61
D558_RS02120 NONE
D558_RS02125  427737 ..  427763 + -16.7  -5.72622   CACGCCAGGCGCCGA         GGTCTTGCACG CCTGC CGTGCAAGACC         TTTTTTATTTCTCGC 100 43
D558_RS02170 NONE
D558_RS02175  440066 ..  440116 + -14.7  -3.09208   CGGATCGATCGCGTC GCGGCAGCCTG-GCACGT-CCGTGG TCA CCACGGCGCGCCCGCAAGCTGCCGC TTCAATCAATGATTT  80 238
D558_RS02225  452932 ..  452945 +  -4.5  -3.28001   TAGGACCGCTTCGCT               TGGTG CTTG CACCG                TTGCGTTTCGGCATC  49 184
D558_RS02235 NONE
        thyA NONE
D558_RS02245  456244 ..  456278 +  -8.4  -2.70932   TGCGCCTGGGCCAGG     CGCTCGCGCGTACGCA GAA TATGGGCGCGCAAGCG     TCCTTCGCGCACGAC  53 312
D558_RS02255 NONE
D558_RS02260  460391 ..  460414 +  -8.8  -5.00616   AGTAAACCGGTTGTC          ACA-GGCGGGC GAT GCCCGCCATGC          TTTTTTGAGGGGCCC 100 36
D558_RS02265  462007 ..  462021 + -12.8  -2.70932   GTGAAAACCCTCATC               GCCGCC ACA GGCGGC               TCGTTCACAACAAGG  73 103
D558_RS02270  463648 ..  463661 +  -4.5  -2.87564   AAGCCCCCTGATTCC               GGCTCG ATC CG-GCC               TATGTGCGGCGATAC  46 30
D558_RS02275 NONE
D558_RS02280 NONE
D558_RS02285  467322 ..  467336 +  -2.7  -5.40072   ATTCTCTCCCGTGCC               CACGC CGCTT GCGCG               TTTTTTTCGCGGCAA  84 137
D558_RS02290 NONE
D558_RS02295  470408 ..  470444 + -11.3  -2.77899   CCTGGCTATACTCGC    CGCGGGTCGCGCCCGGG CCA CCTGCTCGCGCGCCGCG    TCATTACTCAGGAAC  66 152
D558_RS02300  472377 ..  472392 + -11.8  -5.55664   TGACTCCAGTAGCCG              CGCGCC TTCG GGCGCG               TTTTTTTGGTGCTGC 100 38
D558_RS02335  482268 ..  482295 + -10.6  -2.92246   CTTGGCAGGCAGCGG        CGTGGTGTTGGA AAAC TCCAGCGTCACG         TGTCCTTCCCATTCC  62 167
D558_RS02360  489810 ..  489862 +  -9.2  -3.89614   CCACCGCCTCGGCCC AGGT-C-CGCC-G-CGCAGGCGCTGC CCGGC GCCGCGCCTGCGCCTGGCGCGTACCG TTTACTATGTCCCTT  75 41
        metG  492078 ..  492096 +  -9.5  -5.40072   CACTGATGCCGACAA             GCGCCGT AGCTC GCGGCGC             TTTTTTTCAGGCCAG 100 35
D558_RS02385  495108 ..  495121 +  -3.8  -3.32647   AACTGAACTCGCCCT               CACC GCACTA GGTG                TTGGTCTGATTCCGA  47 35
D558_RS02390  495914 ..  495928 +  -5.6  -4.63486   TCTCGACCAATTCGG               CGGCGA CGA TGGCCG               TTTTATTGCGCACAT  79 72
D558_RS02410 NONE
D558_RS02415  500805 ..  500821 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 514
D558_RS02425  501710 ..  501721 +  -7.2  -2.71011   CACCATCGTCGTGCG                CGCC ATGC GGCG                 TGGTTGACGGCGAGT  51 7
D558_RS02430 NONE
D558_RS02435  502956 ..  502974 +  -4.4  -3.34895   TCGAAGGCCTGGCTC             GCGTGCCG CTC TGACGCGC             TTAGTTGACCGTGAC  51 12
D558_RS02455  506405 ..  506429 +   -10  -3.25823   ATAGCTGCGCGGCGC         GGTGCGCCGCT AGTC AGCG-CGCGCC          TTGCTATCGGCACAG  68 37
D558_RS02490 NONE
D558_RS02495 NONE
D558_RS02500 NONE
D558_RS02505 NONE
D558_RS02510  519147 ..  519201 +  -9.2  -3.70902   GCAGATGACCCGCCG TGAGGGAGACAGGCGCATCCATTAGC CAT GCTTATGATTGCGCCTGTAATCCTAA TTTGAATCTGCCGCC  72 93
D558_RS02515 NONE
D558_RS02520 NONE
D558_RS02525  522763 ..  522785 +  -8.3  -3.14229   CACCAGTTCGCCCTG           CCCGCGCCG CAGAA CGACGTGGG           TATTCATCAGCATGT  57 400
D558_RS02565  531454 ..  531465 +  -5.8  -3.61398   CCCGGGCACGTCCGC                TCGG CATT CCGA                 TTATTGCAAGCGCGA  55 57
D558_RS02580  534878 ..  534901 +  -3.9  -3.35992   AGTATCCAGACGATA         GA-G-GCCTCC CAAT GGAGGCTCGTC          TTCCTTGCGATAGAT  49 524
D558_RS02590 NONE
D558_RS02595 NONE
D558_RS02600 NONE
D558_RS02605 NONE
D558_RS02610 NONE
D558_RS02615  542883 ..  542905 +  -9.1  -3.44051   ACGCCTCGAACTCGC           GCGCCAGCT CCAGC AGCTCGCGC           TTGTAGTCGTCCAGA  65 106
D558_RS02625  544834 ..  544857 +  -2.3  -2.65264   CGATGCGCCGCCGGC          GCATGCCCT GCCAGA AGGGCCTCC           TCGTATGCATACTGC  38 69
D558_RS02630  545673 ..  545699 + -14.5  -3.34715   ACCCTGCAAAAAAAA        CCGGCCAGCTCA ACAG TGAGC-GGCCGG         TCTTTCACAGCGGTG  87 63
D558_RS02650  549446 ..  549467 +  -3.6  -3.28712   ATCGGGCATTCATAG           CGTCGACT TAAGGC GGCCGACG            TTCTGGCGCAGCGAC  47 15
D558_RS02655 NONE
D558_RS02660  552239 ..  552286 +  -5.7  -3.61715   CCTACGTGCGATGGC GCTGCGAGGTTGAGT-TACGGCC CCAT GGAC-TACGCTCAACTTCGCAAC TTGTTGGAGCCCCTG  55 13
D558_RS02665  553415 ..  553431 +  -2.1  -4.15788   CTGCCTTGCGGCAGT              CGTGTGC CCT GCCCACC              TTTATTCGGCGCGTT  59 389
D558_RS02685 NONE
D558_RS02690 NONE
D558_RS02695 NONE
D558_RS02700 NONE
D558_RS02705 NONE
D558_RS02710  560970 ..  560992 + -14.2  -5.63103   CCGTGCCGGCTGATT           CGGCCAAACG CCA TGTTTGGCCG           TTTTTTTGCTTCAGG 100 255
D558_RS02715  561693 ..  561741 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS02720  562375 ..  562389 + -12.8  -3.34398   GATCGTGGCGATGCA               CCGCCG GCG CGGCGG               TATTTCGACCCGCCA  79 205
D558_RS02740 NONE
D558_RS02745 NONE
D558_RS02750  569410 ..  569464 + -19.5  -4.07568   GGCCCGGTAAAACAC GGCTCTTG-GCCATGAAAGAAGGGGC TTGC GCCCCTTTTTTCATGGCGCAGGTGCG TTTTACCGGCCGAAC 100 31
D558_RS02760 NONE
D558_RS02770  572700 ..  572721 + -10.1  -3.05384   GTGGCGCAGGTTTCT           TGCGGCGCGC ACT GC-CGCCGCG           TTAACTCCAAGGACA  66 0
D558_RS02775  573537 ..  573547 +  -6.8  -3.43203   CCCGGCTGGCGACTT                 CCAG CGC CTGG                 TTCATGTTCTGCTCG  57 201
D558_RS02835 NONE
D558_RS02840  585156 ..  585173 +  -6.3  -4.18161   CGCGATTTTTAGTCT             TTCCCTA GCAC TAGGGGA              TTTTCCAAGTTTGTG  69 73
D558_RS02845  585625 ..  585641 +  -3.6  -2.78018   GCCGACTGGTGGAAG              CGGTGA TCTGC TCCCCG              TGATTAGTACGAAAT  43 6
D558_RS02850  586039 ..  586087 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS02855  586920 ..  586953 + -10.9  -3.23216   CAAAATTCCCAGAAA     GCAAAAAGCCCACCG CAAT CGGTGGGCTAAGTGC      TTGATACTACTAGAG  71 404
D558_RS02885  590836 ..  590869 +  -5.9  -3.23899   CTTGACGTCGAAAAT     CGTGTCGGGAGTCGCC ATG GCCGACGCCA-ACACG     TTGACTTCATTGACC  51 222
D558_RS02900  593002 ..  593024 +  -7.6  -2.78463   GGCTTCCCAAACGCG           GCCAGAGGCG GCC CGGCTCTGCC           TATCATGGAAGCAGT  54 81
D558_RS02905 NONE
D558_RS02910  595494 ..  595526 +  -9.2  -3.83026   CTGCGTCTGGCACAG     CGGCAATGGCCGGCTG CGC CAGAC-GCC-TTGCCG     TTTGCTCTCAACGGC  75 490
D558_RS02915  603288 ..  603325 + -28.5  -3.64103   TTCAGTAAACCCTTT   CCGGCCAGGCCCGGGTC AACA GACCCGGGCCTGGCCGA    TTTGCCCTGTACCTA 100 33
D558_RS02920 NONE
D558_RS02925  605618 ..  605653 +  -8.2  -4.14243   CCTAGAACTGGATCC    AGCCTTGCCCACGGCTG CGA CAGTCG-GGGCAGAGCG    TTTTCCACTGCCATA  72 89
D558_RS02945  610274 ..  610322 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS02950  610942 ..  610962 +  -2.4  -3.06183   AGATCAGGCAACTCA            GTCAGCGG AACGC CCACTGCC            TTAGCTGCGAATGGC  42 191
D558_RS03000  622181 ..  622232 + -17.9  -3.06183   CACCTGAAACGCCCT GCCTGAACCGGCCCG-CGCCGCCGC TCCA GCGGCGGCGCCTGGCCGGG-CGCGC TTACGTGCGGCTGGC  91 20
D558_RS03010  625385 ..  625395 +  -2.4  -2.72379   CCGCGCCCAGCCCTG                 CGCG CAC CGCC                 TGCTTGACGCCTTCC  38 215
D558_RS03020  627232 ..  627266 +  -8.6  -4.75372   CTGGCCGTCTGATGA    CG-CACCCGGTCG-GC CGCGA GCACGACCGGGTCACG    TTTTTCCTGCATAAT  93 29
D558_RS03025 NONE
D558_RS03030  629219 ..  629230 +    -3  -4.55673   GTAATCGGTGTACAT                TTAC AGCA GTAA                 TTTTGTCATCTGTTT  66 62
D558_RS03035  630034 ..  630050 + -13.7  -2.64472   GCAGAAACACCAGTC              CGCGCAC GGC GTGCGCG              TCGGTTTCGCAACTC  70 247
D558_RS03050  632312 ..  632331 +  -4.9  -3.96841   GGTGATTCAACGAAC            CCACGCC CGTGGA GGCGTAG             TTGTATTTATTGGCG  62 503
D558_RS03060  633425 ..  633449 +  -4.2  -3.27951   GCCGGCGTTAAATAT         CCGAGCGCGCT GTGA GGC-CGATCGG          TGTTGTACTCGACTC  47 120
D558_RS03080  635864 ..  635893 + -23.7  -4.15508   TTTGATGGGCGGAAA       CCACATCGGCGCC CGAG GGCGCCGATGTGG        TTTTCACGATTACTT 100 48
D558_RS03150  651876 ..  651901 + -11.9  -5.96521   CGCTCCAATGAAAAA         TCCCCCG-CTGG CAA TCAGACGGGGGA         TTTTTTTTGGTTCAT 100 42
D558_RS03260  672741 ..  672758 +  -6.3  -4.08767   AAGGTCGTCTCGGCC             CGGACATC CAC GATG-CCG             TTTTGCCCAAATACC  66 85
D558_RS18080 NONE
D558_RS18085  678463 ..  678475 +  -3.4  -3.16921   ACGCACGGCGGCAGG                CTGA GCATG TCAG                TTCATAAACGTTCCT  43 22
D558_RS18090 NONE
D558_RS03330 NONE
         rho  687967 ..  688004 +   -20  -4.56597   CTACGCCCCGGAAAA   CACCCCACAGCCTGGA CTGTCA TCCAGACTGTGGGGTG    TTTTTACGAGAACCC 100 53
D558_RS03345 NONE
D558_RS03350  695250 ..  695270 +  -6.8  -4.09818   GACGATATTGACGGC            CAGACCGC CGCGC GCGGTCTC            TTTATACTTGGTCTT  68 56
D558_RS03360 NONE
D558_RS03365  699212 ..  699226 +    -7  -3.07043   TGACTTGCCCGAGAT               CCCGCC TCA GGCAGG               TATTCACGTCGTCAG  54 38
D558_RS03385  703511 ..  703524 +  -2.3  -2.51871   CAGGACCTCGCACTG               TAGGC GTCA GCCTC                GCTTTTCATCTGGAG  38 23
D558_RS03390 NONE
D558_RS03395 NONE
D558_RS03400  706579 ..  706614 +  -7.4  -2.67209   TTGACGAGACGACTT    CGCCGAGAGCGCCGCGC CGT GTGCG-CACGCTCGTCG    TCCTGTCCATTGCTG  50 37
D558_RS03405  707669 ..  707684 +  -8.2  -3.12142   ACGTAGCCCTGTTCG              CGTGCC AGTC GGCGCG               TATCTTCCATGTAAC  57 337
D558_RS03415  710743 ..  710765 +  -5.4  -3.12432   TCTCCAGCACGGCGC           CCTGGCGCCG TGC TGCCGCTGGG           TATGTTCGATCCTTT  49 55
D558_RS03420 NONE
D558_RS03425  712362 ..  712378 +  -5.8  -4.99645   AGCCTGATGCATTGC             CGGC-CG TCAC CGTGCCG              TTTTCTTTCTGAAAT  87 487
D558_RS03455  718730 ..  718766 +  -7.3  -2.78384   GGCGGGTAATTGAGC   TCCTGGTCATC-CCCC TTGGCC GGCGTGCTGACCAGGA    TCTGATGCAAGGCAA  51 137
D558_RS03465  721518 ..  721539 +  -8.1  -3.32343   GTTTTTGGGTGGCTA           GCAGGAGATT TCC AATC-CCTGC           TTGTGCGAATATCCC  59 242
        rpmB NONE
        rpmG  722115 ..  722132 + -12.7  -5.61881   GTTTCGGTCGCAAAA             GCCCTGC CCTC GCAGGGC              TTTTTGTTTTTGCAC 100 48
D558_RS03480 NONE
D558_RS03485  725003 ..  725016 +  -3.7  -3.23979   AAATATCACCGCCCA               GGGCC CTTC GGCGC                TTGAGTTCGTCTTCC  47 446
D558_RS03495  727255 ..  727292 + -28.7  -4.15508   CGTCCGGTCAAACCG   GAAAGAGCCCGCCTCAG AGAC CTGAGGCGGGCTCTTTC    TTTTGGGGGTTGATT 100 48
D558_RS03500 NONE
D558_RS03505  729078 ..  729117 +  -2.7  -3.85817   GCACCTCCTATAATC  TAGGG-TTTGAGCGTCCG TCCGC CGGCCGCACCCATCCCTA  TTTCTACGCACGAGT  53 40
        leuS NONE
D558_RS03515 NONE
D558_RS03520 NONE
D558_RS03525 NONE
D558_RS03530 NONE
D558_RS03535 NONE
D558_RS03540  736190 ..  736200 +  -4.6  -4.96848   GGCAGCACCGAGATC                 CCGG GCA TCGG                 TTTTTATCTGCACAC  81 185
D558_RS03560  741147 ..  741195 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS03565  741790 ..  741814 + -15.8  -4.09685   TTGCGCAAAACAAAA          CCCCGTAAGC GGATA GCTTACGGGG          TTTTGAGGAATAAAA 100 166
D558_RS03600  750755 ..  750777 +  -5.4    -3.254   CTGCATGTCCCTGTT           GCACATGGCG AAG CGCCGCTTGC           TATTCTGGCTCAGTC  51 70
D558_RS03605 NONE
D558_RS03620  755445 ..  755462 +  -2.6  -3.85698   GGCCGCGCCCAGATG             ATGGGC CAGAAT GCCCAG              TTTGTGCGAGGCCAG  55 158
D558_RS03630  758725 ..  758758 + -19.1  -4.57569   CCGGCCGGGCTGAAA     CGACAAACCCTCCCGT CAA ACGG-AGGGTTTGTCG     TTTTTGGGCCGCTGC 100 65
D558_RS03640  762067 ..  762083 +  -9.4  -3.52192   GAGCGCCTGAACTTT              GACCGG ACATC CCGGTC              TTATATAAGATTGAA  69 141
        acnA  764929 ..  764952 + -18.2  -2.52464   TCGGTCCATCATGCA          TCACGCCCCG CTTG CGGGGCGTGA           TGCATTGGGCAGGCA  95 50
D558_RS03655 NONE
D558_RS03660  768323 ..  768349 +  -4.2  -3.86194   AATGGTTAACTCCGC         TTACGCGCATGC ACG GCGAGCGCGCAC         TTTATCCCCGGAGTT  57 134
D558_RS03665  768952 ..  768979 + -14.2  -4.10161   AGCTGCCCGCCAAAA        CAAACGCCCACC GCAA GATGGGCGTTTG         TTTTGGGCCGTGATC 100 48
D558_RS03765  786688 ..  786709 +  -8.8  -5.60993   CACATTCACATCAGG           CCTGCTTT CGCAAA AAAGCAGG            TTTTTTTATGCCGCA 100 109
D558_RS03770 NONE
D558_RS03775  789203 ..  789218 + -11.8   -4.8622   ACGATCGTTCTGCAT              GCCGCC GCGG GGCGGC               TTTTTCATTGCACCC 100 55
D558_RS03800 NONE
D558_RS03805  796532 ..  796543 +  -7.2   -3.2614   CGCCTCCCAGATGTA                GGCC GGTG GGCC                 TTCCTCTCCGGCATG  54 396
D558_RS03815 NONE
D558_RS03820 NONE
D558_RS03825  799246 ..  799260 +    -7  -3.29043   CAATAAGCGGCGACA               GCCGGC AGT GCAGGC               TTGTCCCAAGGCGTT  54 74
D558_RS03835  801570 ..  801582 +  -9.1  -3.06815   CAATCAGCGCCTTCG                GTGGC CTG GCCAC                TCTCTTCCGGACCGT  60 113
D558_RS03840  803009 ..  803037 +  -7.4  -3.07307   GCCAGACCGATGAGC       CGCAAGGCCAGAT CGCG GTC-GGCCTCGCG        TTCGATCCAGATTTC  55 193
D558_RS03850  804513 ..  804533 +  -6.1   -4.1337   CGGCGCGTGAGACAA            TGCCGGC CTGAACA GTCGGCA            TTCTTTCTCATGTCC  69 31
D558_RS03855 NONE
D558_RS03860  807339 ..  807352 +  -3.7  -3.41051   CAGCCAGCAGAATCT               GGCCG TGCT CGGCG                TTCTCATAGACATGC  49 164
D558_RS03870 NONE
D558_RS03875  811465 ..  811504 + -15.6  -3.86015   TGACCGTCAAGCAGT  GTTACCGGGCGCCGGCTG CCAG CAGCAGGCGCTCGGTCTC   TTTCTGCCCGCGCTG 100 38
D558_RS03910  818631 ..  818644 +  -3.7  -3.05384   GCCCGGCAGATCACC               ACGGC ATAA GCCGA                TTCGATCGCCGCCCC  45 17
D558_RS03915  819798 ..  819824 +  -7.9  -3.19602   TTTGAGGAGGCGTTC         CCTTGGGCGCG AGCAG CGCGTTCCAGG         TATTGATCTCGAAGC  57 229
D558_RS03940  823534 ..  823544 +  -6.8  -3.53012   CAGATGCAGATGGCC                 TGGG TGG CCCA                 TTTCCGGCACCCGCC  60 111
D558_RS03950 NONE
D558_RS03955  826649 ..  826673 + -13.5  -3.37344   CCAGCGAGTGACCGA          CCGGCTGGCCG AGG CGGTCAGCCAG          TTGCTTGAGTCCAGC  83 461
D558_RS18100 NONE
D558_RS18105  830255 ..  830265 +  -2.4   -4.3953   CTTACATTAATTTCG                 CCGG CAG CCGC                 TTTCTTGTCCTTGCA  62 314
D558_RS03990 NONE
D558_RS03995 NONE
D558_RS04000  834462 ..  834493 +    -5  -3.05715   CGGCTGACGGTGCTG      GCTGACA-CGCCCAG CGC CTGGGCGATGCGCGC      TTGGGTCAGCCGCTT  47 21
D558_RS04005 NONE
D558_RS04010  838457 ..  838477 +  -2.5   -3.9281   GGCCAACCACATCCC            CGCCAGA CGCAGGC TCTGGCC            TTCTTTCAGGCTGAT  55 318
D558_RS04020  840150 ..  840184 + -10.6  -3.12803   GGCTGTCTGCCGCCG     CGCTCACGACCTCGGC AAA GCAGGTGTCGTAAGCG     TCTTCGGTATGCGTC  63 165
D558_RS04030  841926 ..  841952 + -13.7  -4.07687   CTTGTCCTCGCTGCG         GCCGCGCTGGA TATCC TCGAGCGCGGC         TTTTAGACGCACCGT  93 103
D558_RS04105  856236 ..  856253 +  -8.3  -3.08813   GCCGAACAGCGGCAC             CGCGCAG ACAT CGGCGCG              TATCTTGGCCTGGGC  57 138
D558_RS04115 NONE
D558_RS04120  859672 ..  859693 + -17.3  -3.90112   CCGGGCCAGAAAAAA           CACGGGGCC CGCA GGCCCCGTG            TTTCATTGCCAAGCC 100 59
D558_RS04135 NONE
D558_RS04140 NONE
D558_RS04145  864679 ..  864709 +    -6  -3.01712   TACCCGTTTGATCAC      GGGCCGCACGGGC AAGACA GCACGC-CGGCCC       TGTTACACGAACGGC  51 96
D558_RS04150 NONE
D558_RS04155 NONE
D558_RS04160  868693 ..  868728 + -29.2  -3.09516   ACGCCAGGCGTACTG    GCCCCGAGGGTTGGAG ATCC CTCCAACCCTCGGGGC     TTACATGATGAAGAA 100 49
D558_RS04180  872985 ..  873009 +   -15  -2.58822   GGCGCCGTCACTACC         GCGCCGGCGGC TCTG GCC-CCGGCGC          ATGTTCTATGGCGCG  81 48
D558_RS04185 NONE
D558_RS04190  874522 ..  874575 +   -13  -3.25177   ACTGGGCCTATATCC GCGCCTGACGGCCACGTGCGGGGCTG CCCG CGGCCCGGCGCGAGGCCG-C-GCTGC TATACTTTTTTCACG  79 18
D558_RS04195  875446 ..  875458 +  -3.3   -3.1489   GCCCGCGCCTGGCCT                ACGTC CCC GACGA                TTGACTGCTGTTTCC  43 9
D558_RS04200  875741 ..  875757 +  -4.3  -3.34715   GTTCCGTCTATGAGC              GCGCGAC CGG GTGGTGC              TGTTTGCCAGCCATG  49 28
D558_RS04205  875896 ..  875911 +    -4  -3.96148   TCCAGATTTCGCGCT              GCTTTT GAGC GAAAGC               TTTGTGCTCGCCGAC  60 84
D558_RS04250 NONE
D558_RS04255 NONE
D558_RS04260 NONE
D558_RS04265 NONE
D558_RS04270 NONE
D558_RS04275  891640 ..  891651 +  -5.8  -3.17075   ATCACAGCTTGGCGA                CCGA GACC TCGG                 TTGCCTTGACGAAGG  49 46
D558_RS04330 NONE
D558_RS18110 NONE
D558_RS04335 NONE
D558_RS04340 NONE
D558_RS04345  907076 ..  907090 +  -7.1  -3.36327   GCCCCAACTGGCGAA               GGCCA GCAAA TGGCC               TTGTGCATCGACTGC  55 381
D558_RS04390  913016 ..  913028 +  -5.5  -3.01712   TGCGTGGCCAGTGAC                TTGGC ATC GCCGA                TATTGACCAGCCGGG  48 211
D558_RS04400  915886 ..  915920 + -20.1  -3.51708   CTATCGGGAAGCACA     GCGCCTTGCGGAAGA CACAA TCCTCCGCAAGGCGC     TTGATTTGGGAAGTC 100 69
D558_RS04405 NONE
D558_RS04410  917671 ..  917701 +  -2.4  -2.73903   CGCTGGTTGCGTCAA       GGAGGCAAACGCCA TGC TTGAGCTTTCCTCC       GTTTCCAAGAGTTTT  39 5
D558_RS04415 NONE
D558_RS04420  919203 ..  919221 + -14.6  -5.09426   CCGCTCCAACCTGAA             TGCCTGCG ACT CGCAGGCA             TTTTTTCGCCTTGCG 100 49
D558_RS04435 NONE
D558_RS04440 NONE
D558_RS04445  929985 ..  929997 +  -6.2  -2.70932   GGGCGCGGCCAAAAT                GGCC TGAAC GGCC                TCGTTGGCCGCCGCC  46 70
D558_RS04470  937063 ..  937097 +  -6.5  -2.78816   CGAAGAGCGCCGCCT   GGC-CATGCTGCGCGG ACATCA CCGCGC-GC-TGTGCC    TGTGGTCGCGCGTCA  49 222
D558_RS04475 NONE
D558_RS04480 NONE
D558_RS04485 NONE
D558_RS04490 NONE
D558_RS04495  941164 ..  941184 +  -2.5  -2.93073   TGGGCATCGCGCCAC            GAGGACG AGAAATC CGTCATC            TCGTTGTTGAGCAGA  41 447
D558_RS04505  943544 ..  943561 + -11.3  -4.57073   GCAGCAAATGAAAAA             GCCGTGT AAAT ACACGGC              TTTTTCGCCACGCTC  93 84
D558_RS04515  945720 ..  945746 +  -5.1  -3.27923   GGCGGGCGGCACGTA        TGCCATG-CCTG GAAT CAGGTCTTGGCG         TTGGTCATGTTGCCG  49 66
D558_RS04525 NONE
D558_RS04530  949135 ..  949152 +  -9.9  -5.75945   GCAGGCAACAAAAAA             TCCATCC CTCG GGATGGA              TTTTTTTTCGCCGAT 100 46
        mutL NONE
D558_RS04545  952763 ..  952775 +  -9.1  -5.81412   AAAGCATGAAAAAAC                CCGCT GAG AGCGG                TTTTTTTTCCGTACA 100 40
D558_RS04555 NONE
D558_RS04560 NONE
D558_RS04565 NONE
D558_RS04570  957389 ..  957408 +  -7.2  -3.68351   CCTGGCTCGCTGCCG            GAT-GGCGT CAG ACGCCGATC            TTTCCGTCGTCGGCC  63 91
D558_RS04580  959414 ..  959462 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS04585  960170 ..  960184 +  -9.2  -2.76055   CGGGTGGCGCCATTC               GGGTGC AGG GCGCCC               TGGTCTATGTATTCG  56 279
D558_RS04620 NONE
D558_RS04625 NONE
D558_RS04630 NONE
D558_RS04635  970879 ..  970891 +  -2.6  -2.87564   CCCATAAATCAAGGA                CGTG ACCGC CGCG                TCTATCCCCAGATGA  40 454
D558_RS04645 NONE
D558_RS04650 NONE
D558_RS04655 NONE
D558_RS04660 NONE
D558_RS04665 NONE
D558_RS04670  977922 ..  977938 +  -2.1  -2.66316   CCCGCCGCCTTCTGG              CGGGCGT TGA ACGCGCA              TCCTATAGTCGCCAC  38 51
D558_RS04675 NONE
        tcuB  980472 ..  980515 + -10.2  -3.09671   TAGGAAAACCCTCGA GGCGGGCGCC-GATTCGGC AGCCCTC GCGGCATCCGGCGCCCCCC TGTTACGATTGGGGT  66 38
D558_RS04685 NONE
D558_RS04690  981528 ..  981543 +    -6  -3.70902   ATCCAGGCTCAGAGC              GCGCGG TGCG CCGGGC               TTTCGGTCTGGCCGG  61 46
D558_RS04700  985303 ..  985326 +  -9.4  -2.61264   GAATGGCACGGTATA          CACCCCGCGC AGGA GCGCGGCGCG           ATTCTGCGTCAACGG  55 203
D558_RS04710  988050 ..  988064 +    -7  -3.18383   GACGGCGATCCCCTG               GCGCTG CAA CTGCGC               TTGCTCGATGCCGAT  56 269
D558_RS04730  994276 ..  994288 +  -4.8  -3.40403   CAACCGGGAAGTCAA                GGTG GGGTA CACC                TTCTGATGCGCGCCA  51 7
D558_RS04735  995043 ..  995053 +  -2.4  -3.11281   TCCGGGCAAGGTCTC                 GCGG TAT CCTC                 TCTCGTTTTGGCTAG  41 94
D558_RS04740  996277 ..  996291 +  -3.5  -3.21924   GGCGATTGGCCGCAC              GC-CCG TCGA CGGTGC               TGTTGTCGCCGATCG  45 461
D558_RS04755  997476 ..  997503 +  -2.5  -2.61274   CGGCAGCCAAGGCGT        TGCCGCGGGCG ACGCAC CGACCGGAGCA         CTTCCTTGGAATACC  38 78
D558_RS04760  998640 ..  998650 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 107
D558_RS18115 NONE
D558_RS18120 NONE
D558_RS04770 1000449 .. 1000473 +  -4.2  -3.27951   GCCGGCGTTAAATAT         CCGAGCGCGCT GTGA GGC-CGATCGG          TGTTGTACTCGACTC  47 75
D558_RS04805 1006705 .. 1006717 +  -4.7  -3.68827   TTATCGGCACAGATG                GCCGC TAC GCCGC                TTTCCGTGATCCATG  58 321
D558_RS04840 1010884 .. 1010903 +  -2.1  -3.14564   TGCGTTGCGTCTTGG            GAGC-GCC GGCCG GGTTGCTC            TTCGTGAAGAGATCG  42 227
D558_RS04870 1021116 .. 1021130 +    -7   -3.7941   CAACGGGCGTGCAAG               CCCAGC GAG GCCGGG               TTGTTGTCGCCAATG  62 171
D558_RS04880 1022586 .. 1022600 +  -8.6   -2.8478   GCGCAGGCCGATCCA               GCGTAA TAT TTACGC               CTTTGCTGACATCAT  58 72
D558_RS04885 1024509 .. 1024528 +   -15  -5.10933   CGCCGTCCCATGAAG            CAGCCCGC TCGC GCGGGCTG             TTTTGTTTTGGGTGC 100 47
D558_RS04895 NONE
D558_RS04900 1028383 .. 1028393 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 60
D558_RS04905 1029794 .. 1029817 +  -6.6  -3.07501   TGCTCGGCGGCCACC          GCCCGCGC CAGACGAT GCGCCGGC           TCTTCCAGGTTGTCT  51 422
D558_RS04915 1031058 .. 1031079 +  -5.2  -3.14132   CCCCGTCGACCATGC           GGCAAATCC CCAAC GGATT-GCC           TTCCTGCAACACCGG  49 100
D558_RS04920 1031682 .. 1031695 +  -5.2  -4.14392   CGCACCCGGTAAAAT               GCGC CCCCAT GCGC                TTTTCCGACTTCGAC  66 164
D558_RS04925 1033090 .. 1033110 +  -2.4   -4.2679   CTATTACGTTCGCTG            GCGGCGTG ACTGA CACGCCCA            TTTTCCTCGCCATTG  63 355
D558_RS04935 NONE
D558_RS04940 1036045 .. 1036063 + -11.6  -3.68024   CGGGAGGCAATGGCG             CCGCCGGC TAT GACGGCGG             TTCTGTCTTCGGGGG  78 515
D558_RS04945 1037934 .. 1037958 + -12.8  -5.72616   TTCAACCGTCTCAGA          CCCGCCGTCG CCAGT CGACTGCGGG          TTTTTTTCTGTCACT 100 155
D558_RS04950 1038895 .. 1038943 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS04955 1039446 .. 1039464 +  -8.1  -2.92613   GGCGCGGTTACTCGC             TGGCGCA ATTGC TGCGCCG             TAATTTCGGGTGGAA  56 74
D558_RS04960 1039714 .. 1039750 + -12.4  -3.12595   CACCTTGATGTCGAA   GA-GATCGAGCACGCGG GCGA CCGTGTGATCGATCATC    TCTTCGGTGCTTGCC  69 91
D558_RS04990 1044140 .. 1044161 + -15.9  -4.54727   CACCAAAAGATTCAA           TGCCCAGCC TAAC GGCTGGGCA            TTTTCATTTGCGCGG 100 36
D558_RS04995 NONE
D558_RS05000 NONE
D558_RS05005 NONE
D558_RS18130 1049551 .. 1049572 +  -9.3  -2.71712   ATCGTGCGGATCAAG           GCAGCGTGC GATT GCGCGCGGC            GTTTGCCAACGAACA  61 93
D558_RS18135 NONE
D558_RS05015 NONE
D558_RS05020 1055979 .. 1056000 +  -5.7   -3.2375   GCCAGGCTTGGCGCC           GACGCCCAT CATG AAGGGCGCC            TTGCGTTCTACACTA  51 12
D558_RS05025 1057037 .. 1057051 +  -5.6  -3.35992   CGTCACATCCAGCAG               GACGCC ATC GACGTC               TTCCTTGAAGTCGAT  53 208
D558_RS05035 NONE
D558_RS05040 1060914 .. 1060941 + -14.1  -3.11072   AGGCGTAAAGCCATC        GGGCCTCTCGC CGTAAC GCGCGAGGCCC         TCTCTATTACATACC  83 33
D558_RS05045 NONE
D558_RS05050 1063165 .. 1063175 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 60
D558_RS05055 1064589 .. 1064615 + -14.5  -3.73647   CTCCATTTTTTGATT        GGCA-CCGGGCA CTGA TGCCCGGTTGCC         TTGTTAATCGCTGGG  95 435
D558_RS05075 1069370 .. 1069382 +    -2   -4.2828   CGCGAAAGCGCAGAA                TTCT AACAG AGAA                TTTTGATAAATGGAA  63 206
D558_RS05090 NONE
        rpmA 1071246 .. 1071269 + -19.6  -5.07652   CCCACCAGAACGCAA          GGCCCTGCCG TAAA CGGCAGGGCC           TTTTGTTTTCAGGCA 100 49
D558_RS05100 1072480 .. 1072499 + -10.6  -2.70932   CCCCCATCCGCGTCA            CCGGCCGC TACA GCGGCCGA             TCCTTGAAACCGCCC  63 48
D558_RS05105 1074137 .. 1074147 +  -2.4  -3.56821   GCCACACATACGCCC                 TGGC CAC GCCC                 TTTCACCAGTCTGAT  50 503
D558_RS05115 1075425 .. 1075444 + -12.1  -3.72576   GGCCTCCATGAAAAA            GCCCGCC GGCAAG GGCGGGC             TTTGATGCGGCAGAC  81 499
D558_RS05130 1078273 .. 1078292 + -13.6  -5.96521   ATGACTTCATGCAAG            CCGCTCAC GTCA GTGAGCGG             TTTTTTTTGGTTCAT 100 49
D558_RS05135 NONE
D558_RS05145 1081898 .. 1081919 +  -8.7  -3.72695   TGCCGGGGTTCATGA           TGCCTGC-CG GGT CGAGCAGGCG           TTTGATCCCCGACAT  67 99
D558_RS05180 1089250 .. 1089278 +  -4.3  -2.63688   CAGAAAGGCTGACAC        TGCGCCGCCTGTG ATC CTCAGGCGGGTCC        TAAATTGCTTTCGAT  42 29
D558_RS05185 NONE
D558_RS05190 NONE
D558_RS05195 NONE
D558_RS05200 1092295 .. 1092318 + -18.2  -2.70932   TTTGGACTGATCGTA          CACAGGGGCC GCGA GGCCCCTGTG           TCATTCACCGCCGGC 100 31
D558_RS05215 1094975 .. 1094987 +  -6.2  -3.14132   ATGGTTGCTGCGGTA                GGCC AGCCA GGCC                TTGGTGGGAGGGGGG  49 435
D558_RS05265 NONE
D558_RS05270 NONE
D558_RS05275 1109261 .. 1109271 +  -2.4  -3.07113   AACGATCTGAGACCC                 GCCC CAT GGAC                 TTCCATACGCTCATC  41 31
D558_RS05280 NONE
D558_RS05285 1111738 .. 1111778 +  -6.7  -4.13767   TAATCTCGCATCTTC GGCTGCCGC-CCCTGGGC GCGGCG GCCCAGGCCGCGGGGGCA  TTTTCCCCTGCCCGC  69 136
D558_RS05290 NONE
        rimO 1113968 .. 1113987 +    -2  -2.92642   CACCAGCGCGAGCAT            GTCCTCCC GATA GGGAAGAA             TCTCTACATCGTGGT  41 460
        gabD NONE
D558_RS05310 NONE
D558_RS05315 1118105 .. 1118116 +  -4.4  -2.71712   GATGCGTCTGAACAC                GCAA GCCA TTGC                 ATTTCCGCCGCAGGC  44 167
D558_RS05320 NONE
D558_RS05325 1119842 .. 1119871 + -25.1   -4.1891   CCCAGCGTCTTGGCC       CTGGCTGCGGCCC GCCC GGGCCGCAGCCAG        TTTCTCTTACGCGCG 100 48
D558_RS05355 1127165 .. 1127218 +  -6.5  -3.34988   AAATAGCATAAGCGC CTCCCTGTCAGTGCGAGCTCGCCGC AGGT GCCGCGGGCATGGGTTGATACGGGG TCTCTTTGTCAGTGG  56 281
D558_RS05370 NONE
D558_RS05375 1131440 .. 1131450 +  -2.4  -2.90496   CATCAGGTACGCCAT                 CGAG CAC CGCG                 TCATTTGAGGCCGGA  40 7
D558_RS05380 NONE
D558_RS05385 NONE
D558_RS05390 1134272 .. 1134295 +  -4.6  -2.90194   TCCACTGCGAGTTCA          GGCCTCGTGAA ATC TTCA-GAGGGC          TATCCTTGCCGACAT  45 145
D558_RS05405 NONE
D558_RS05410 1138735 .. 1138747 +  -6.3  -3.35679   CCAGCGGAAGTACTT                TCTGT CGA ACAGA                TTGTAGATACCGGCC  53 165
D558_RS05430 NONE
D558_RS05435 1144357 .. 1144374 +  -2.7  -3.41602   TTGACCGGAAAATAA             TTCCG CACCCAAA CGGAA              TTCTGCTCCGATGGC  46 44
D558_RS05440 1145785 .. 1145829 + -12.5  -2.82895   TCACCGCAGCGCGGG CCCCACCCGGGGCCCGCGCGG TAT CCGCTCGGCGCGCGGGCCGGG ATTCTTACTGCGCAC  73 53
D558_RS05445 NONE
D558_RS05450 NONE
D558_RS05455 1149403 .. 1149438 +   -24  -3.39449   CTGACGCGGTTCAGC    TACCCGGGCGGCGCCG ATCC TGGCGCCGCCCGGGTC     TTACTCTTCATCGAC 100 37
D558_RS05465 1152258 .. 1152268 +  -2.4  -2.52516   CTATCCTGCCATCAC                 CGCC AAG GCCG                 CTTGATCATGAGCAC  38 10
D558_RS05470 NONE
D558_RS05475 1154015 .. 1154027 +  -4.8  -2.52676   AAAAAATCATCGACC                GGGT CTAGC ACCC                TAGCTTGGAGACATC  43 18
D558_RS05480 1155156 .. 1155170 +  -8.5  -3.08679   CAACCCGGCTGCAGA               CCGGG CCAAC CCCGG               TGTTCGATAGCAAGC  60 74
D558_RS05485 1156547 .. 1156570 + -19.6  -4.35483   GGACTGATAGGCACC          GGCCGCCAGC GCCG GCTGGCGGCC           TTTCTTATCCTGCAG 100 34
D558_RS05490 1157612 .. 1157629 +  -6.9  -2.78384   CAGGCATCGACAGTC             GTCAGGC CCTG GCCTGCC              TGTGCTGCGCAAGCA  51 213
D558_RS05495 1159001 .. 1159011 +  -4.6  -2.87132   ATCGTTTTCCCCCGG                 CGCT TCA GGCG                 TCTGTAAAAGCGGCG  46 310
D558_RS05515 NONE
D558_RS05520 1162570 .. 1162604 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
D558_RS05530 1163920 .. 1163930 +  -3.2  -2.52464   CGGTTTCATTCAGTA                 TCGC AAG GTGA                 TGGCTTGAGCGCGCG  39 7
D558_RS05535 1164497 .. 1164516 + -12.1  -4.98531   ATCCGCTGAGCCAAA            GGCGGCC CCTGCA GGCCGCC             TTTTTCATTTGAAGC 100 123
        nhaA 1165881 .. 1165896 +  -3.2  -3.71913   TATCCACGGCTGGCC              TGCCGA ATCC TGGGCA               TATTTTCAGTCTGCC  54 171
D558_RS05555 NONE
D558_RS05560 1168159 .. 1168177 +  -5.8  -3.29511   CTATCTGCAAACCTG             GCCGCTGG CGG CCTGAGGC             TTGTGCAACAATCGC  51 10
D558_RS05565 1169146 .. 1169160 +  -3.4  -2.80016   CTTCCATCAACCGTT               GCCTGG TCC CGGGGC               TGATTAATGCTGCCC  41 216
D558_RS05570 1170897 .. 1170917 + -15.4  -5.96521   TAGCCACCCTGAAGA            CCGGGCCC GTGCA GGGCCCGG            TTTTTTTTGGTTCAT 100 45
D558_RS05575 NONE
D558_RS05580 1173563 .. 1173583 +  -7.6  -2.87132   GCATCACCTGAGCAC           TGTCTGGCG ATGG CGCCAG-CA            TCTATGCCACGCACG  52 120
D558_RS05595 1177615 .. 1177633 + -12.4  -3.01712   AGCTTCTGTAAAACG             CACGGCCG CCT TGGCCGTG             TATTGCAGGAGACGC  71 225
D558_RS05600 NONE
D558_RS05605 NONE
D558_RS05610 NONE
D558_RS05615 1181758 .. 1181768 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 60
D558_RS05620 1183115 .. 1183136 +  -4.4  -2.67803   AATCCGCGGAACCAG          GCTGGC-GCC TGCA GGCCGCC-GC           TCAGTTTGGTCCACC  43 368
D558_RS05645 1185792 .. 1185811 +   -15   -5.8187   ACGCCGGCCCGAAGG            CGGCACCC GTTC GGGTGCCG             TTTTTTTATTGCCTA 100 47
D558_RS05675 NONE
D558_RS05680 1191294 .. 1191316 +  -7.6  -4.18018   TACTGCCCAAAAAAA           TCCCCTGACT CAA GGCCAGGGGG           TTTTGCATGCAGCAC  74 41
D558_RS05690 NONE
D558_RS05695 NONE
D558_RS05700 NONE
D558_RS05705 1196107 .. 1196158 +    -2  -3.41569   GGCCAGCTCGCCTCG GCCGCGCTGCATCGTCTGGCCTGAG GCC CTATGACC-GAGGATGCCGCGCCAC TCTTTGCCTGGCTGC  46 2
D558_RS05710 1197198 .. 1197210 +  -4.1  -3.61398   GTGGTTATAGGCCAG                CTTGT CCA ACAGG                TTGTTGCCGCGCAGA  53 118
D558_RS05745 1204131 .. 1204148 +  -7.7  -3.53811   CGTCCCCTCTTGCAA             TGGCGGGC TTT GCCC-CCA             TTTGCGGGAACTACC  62 43
D558_RS05750 1205651 .. 1205680 + -12.1  -2.57795   GTACACAACCGGCCT       GCCG-GGCGGCACC CAG GGTGCCGCTACGGA       TCGATTCATAGTGGA  69 94
D558_RS05755 1206191 .. 1206220 + -14.3  -5.34309   GCCAGGCTGCCCGAA       GGGCTATGCGGGT GCAA ACCGGCATGGCCC        TTTTTCTTTGCTCGT 100 48
D558_RS05760 NONE
        hslU 1208242 .. 1208265 + -13.2  -5.45802   ATCGTTGCCTCCAAA          CCCTGGCTTCG CAA CGA-GCCAGGG          TTTTTCTTTTGCCCG 100 46
D558_RS05775 1209387 .. 1209412 +  -4.7  -3.15861   GGGGCTGGCGCAGGT         CA-GTTGACGCC AGC GGCGTGAGCCTG         TTCATCGGCGTGATA  47 74
D558_RS05830 NONE
D558_RS05835 1219884 .. 1219910 +  -4.9  -3.99592   CAGCATGTCTTGCAG         GGCGGCGAGGC TGCGC GCGACGGCGCC         TTTGTGATCCTGCGT  62 241
D558_RS05870 1227190 .. 1227215 +  -6.9  -2.60075   ACAGCAAGGAGACAG         CCA-TGCGCATC ACC GATGCACAATGG         GTTCCTTCAACGCCG  50 131
D558_RS05875 NONE
D558_RS05880 NONE
D558_RS05885 1230078 .. 1230096 +    -3  -3.32844   GGTTGCGCCGCGCAA             GCGCTGAG GCG CTCAGAAC             TTGTCGGCTCGGCCC  47 19
D558_RS05940 1241334 .. 1241366 + -17.6  -5.24531   CAGGCATGCGGTATA      GTCGGGCGCGGCGG ACATC CCGCCGCGCCCTTC      TTTTTTATCGACAGT 100 46
D558_RS05945 1242472 .. 1242482 +    -4  -4.32857   CGGTAATATCCCCAT                 TGAT GGG ATCA                 TTTGTGTTTCAAAAC  65 185
D558_RS05950 1243251 .. 1243276 +  -4.6  -3.31792   GGAGGCTTTGCCGCA         CGCTGTCGAC ATGTTC GGTGGCAGCG          TTATGCGCCTGATCG  51 249
D558_RS05960 1246398 .. 1246418 + -12.5  -2.75712   AAGATCCACAGGCTG            TCGGCCGGC AAA GCCAGCCGA            TACTTCCCTGCCTCG  65 111
D558_RS05990 NONE
D558_RS05995 1255932 .. 1255942 +  -2.4  -3.31144   CGGTACCGAAGCCCT                 GCTC ATC GCGC                 TTATGGCCCTGGGCG  45 218
D558_RS06005 NONE
D558_RS06010 1257924 .. 1257949 +  -4.5  -2.66395   CGCTGGCATAAGCCA         GCGCTTGCGGG CCGT CCACCATGCGC          ATTCTCCTGATCAAT  43 30
D558_RS06015 NONE
D558_RS06020 NONE
D558_RS06025 1261232 .. 1261268 +  -4.1  -4.35116   CAAGCGGGTTTGACT    CGCGCCGCTCGCAACCC TGG GCGCTGTGCTCGACGCG    TTTTCATGTAGGCTG  65 278
D558_RS06030 1263603 .. 1263637 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 328
D558_RS06045 1267896 .. 1267913 +  -9.1  -5.65513   AGTATTAACCCGAAA             TGCCTGG TTCG CCGGGCA              TTTTTTTGGTTCATC 100 48
D558_RS06050 NONE
D558_RS06055 1270342 .. 1270352 +  -8.2  -2.82635   GAGCTTCGTGCGCAA                 GGCC AGG GGCC                 TCTGATGATACGGCT  54 10
D558_RS06060 NONE
D558_RS06065 NONE
D558_RS06070 1272497 .. 1272530 +  -3.7  -3.81287   CGATCCAGTTCTGAG     GCGGT-TGGCCGCCAG CTT CTGGCGGCAGCGATGC     TTTGATCCTGCTGTG  57 27
D558_RS06075 1274066 .. 1274078 +  -4.7  -3.53811   CGCCATCGTAACCGG                CGCCG GTT CGGGG                TTTGGCGAAGGTGAC  53 80
        fabG 1275869 .. 1275886 +  -7.7  -2.71364   GACGTCCAGAAAGAA             C-GGCCCA TCG TGGGCCAG             TCATTGAGCCAGTGC  51 171
D558_RS06100 NONE
D558_RS06110 NONE
D558_RS06115 1281277 .. 1281300 +   -11  -3.21063   ATGTGCCGGCCCAAC          CCGCTCGGGAC TGC GTCCTG-GCGG          TATTGCGTTTGGCTG  71 332
D558_RS06120 1282213 .. 1282245 +    -7  -3.72576   TAGGCTGCTGCTCGA     TCAGGGGGCGGATGTC TTT GAC--CTGCCCCCAGA     TTTAGTACGGCACCG  63 204
D558_RS06160 1290593 .. 1290606 +  -2.3  -3.64822   CGACGGCGTTACGCC               CAGCC TGAA GCCTG                TTTCCCTCCGGCAAT  51 92
        rnpA NONE
D558_RS06170 1291305 .. 1291329 +  -4.2  -3.13403   ACGATTGCAGTTAAA          CTGGCGGG CTTTGCTGT CCCGCCAC          TCTTCCTCAGGCACC  45 27
D558_RS06175 1293055 .. 1293077 + -17.7  -3.75897   TACGCTCCCCGCAAA           CGGCCGCGC TTTAT GCGCGGCCG           TTTGCGTTGCGGCTT 100 47
D558_RS06215 NONE
D558_RS06220 1306473 .. 1306518 +    -9  -2.98942   ACAATGAGCAACGCG TGGC-CCCCGGCCTGAGGCGA CGCGC TTGTCTCAGGTCGCGCTGCCA TATATCTGACGGCAT  59 34
D558_RS06230 1309949 .. 1309968 +   -15  -5.75342   GAGTCTTCTGGCAAA            CCGCCGTC ATCA GACGGCGG             TTTTTTTTAGCGCGC 100 51
D558_RS06235 1311190 .. 1311214 + -15.7  -3.78034   AACTCGTGATACACC          GGTGGCGCGCA CTT TGCGCGCCACA          TTGTTGCTGTGGCTG 100 32
D558_RS06240 1312716 .. 1312730 +  -4.2  -2.57344   AAACAACAACGGAGA               CCGCAT CTC ATGCAG               ATTCTGCAAAAAATC  42 114
D558_RS06245 1313728 .. 1313769 +  -5.7  -4.18817   TGATCAAGAAGTAAT CCCCCGGCGCGCCTG TCAGAAAGACCT CAGGCGCGCCGCAGC  TATTTTTCTTCGCTT  66 27
D558_RS06250 NONE
D558_RS06255 1315765 .. 1315786 + -14.5  -6.26417   AGGCACGTTGATCAA           CGGCGTATC AAGT GATACGCCG            TTTTTTTTTCTGATC 100 43
D558_RS06265 1317587 .. 1317619 + -18.6  -3.03012   GCTCACCTCCTGGCG     CAACGCCCCAG-CAC CGTA GTGTCTGGGGCGTTG      TCATTTGTGGATAGT 100 83
        gidA NONE
D558_RS06275 NONE
D558_RS06280 1322269 .. 1322285 + -15.1   -3.0894   ATGTAGTGAGCGGCC              CGGGCCC GGG GGGCCCG              TTCCGTAAATGATTC  85 35
D558_RS06285 NONE
D558_RS06290 NONE
D558_RS06295 1323804 .. 1323826 +  -8.5  -3.70902   AGAACCCATTTCAAA          TCCAGGCGCA GTAT TG-GCCTGGA           TTTGCATCTGAGGCA  69 43
D558_RS06300 NONE
D558_RS06305 NONE
         tuf 1325320 .. 1325347 + -13.4  -3.49475   AATTTGTATCGCCAA        GGGAAAGGGGCC AAGC GGCCCCATTTCC         TTGTGTACAAATAAC  83 39
D558_RS06315 NONE
D558_RS06320 NONE
D558_RS06325 1326507 .. 1326525 +  -4.6  -3.53012   CGAGCTCGATTTCAG             TCAGGT CGAAAAA ACCTGA             TTTCAACCCCGGGGA  53 7
D558_RS06330 NONE
D558_RS06335 1327910 .. 1327938 +  -2.9  -4.28018   GCGCCGCATTCGGTT        GACGCGCAAGGCT TCA AGCCCCAGGCGTC        TTTTGATGGAGTGTT  64 220
D558_RS06340 1328464 .. 1328506 + -13.5  -3.05384   CTCGCGGCCGTGCGC GATCAGAAAGCCGCCGCCTG ATTT CAGGCG-CGGTTTGCGGATC TTCGCTGAACGACAA  79 5
        rplL 1328965 .. 1328997 + -18.4  -4.35524   ACCTTCGCGTCATCT      GCCCGGGGACAGCG CAGTA TGCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 41
        rpoB NONE
D558_RS06355 1337494 .. 1337524 + -19.9  -4.07568   TTCGGCTGCGAGGAA       GAAAACTGCCGGC CTTGT GCCGGCAGTTTTC       TTTTGGAGGGGGGCA 100 55
D558_RS06365 1339575 .. 1339602 +    -4  -2.71731   GCCTGTTGATCGGCA        GCGATGCCCGGGC CCT GATC-GGCAACGC        TCATTACCCAATCCG  42 228
D558_RS06385 1344837 .. 1344868 +  -5.9  -4.08216   GCTTGTCTGCAAGAC      CCGCTCTTTTACGT CACCC ACGTCAGAG-GCGG      TTTTGCGCAAACTGC  64 330
D558_RS06390 NONE
D558_RS06395 NONE
        fusA NONE
         tuf 1349381 .. 1349410 + -18.7  -5.04356   AAGTAATACCCTTCA       CGAAGGCGGTCAGG CTA CC-GACCGCCTTCG       TTTTTCGTTCTTTAG 100 35
        rpsJ 1349788 .. 1349816 +  -8.8  -4.86731   ACGCGATCCGAGAAA        TGGCCGCATCTC CATTC GGGGTGCGACCA        TTTTGTTTGGCGGCC  93 68
D558_RS06415 NONE
D558_RS06420 NONE
        rplW NONE
D558_RS06430 NONE
D558_RS06435 NONE
D558_RS06440 NONE
D558_RS06445 NONE
D558_RS06450 NONE
D558_RS06455 NONE
D558_RS06460 1354899 .. 1354921 + -19.2  -5.80817   TGCCACGAGAAAAAA           CGGCCGGGAT TGC ATCCCGGCCG           TTTTTTTATCTTCGG 100 77
D558_RS06480 1357825 .. 1357841 +  -6.5  -3.28712   CGGCGGGTAATCCAT              CGGCC ATGAGGC GGCCG              TTGTGCAGCACGACG  54 114
D558_RS06500 1361870 .. 1361889 +  -4.2  -3.75863   ATGTTGACCATGCCG            GCCTCCAG CCCA TTGGAGAC             TTTGGTGGCGGTTTT  56 204
D558_RS06510 1364309 .. 1364322 +  -4.5  -4.07568   AGGCCTAGCCGCGAA               GCAGC ACGA GTTGC                TTTTGCGCAGAACGG  62 181
D558_RS06515 NONE
        rplX NONE
D558_RS06525 NONE
D558_RS06530 NONE
D558_RS06535 NONE
D558_RS06540 NONE
D558_RS06545 NONE
D558_RS06550 NONE
D558_RS06555 NONE
D558_RS06560 1368598 .. 1368614 +  -7.9  -3.14564   GCCGCTGTCGAGGCC              GCGGGCG GCT CGCTTGC              TTGATCGCGAGGTGA  57 5
        secY NONE
        infA 1370276 .. 1370292 +  -4.4  -2.85351   TGCAAAGTTATCAAA             CGTCACG GCGT CGTG-CG              TGTCATCTGCACCGA  44 115
D558_RS06575 NONE
D558_RS06580 1371138 .. 1371153 +  -4.6  -2.87132   ATAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAGGGGAACC  46 3
D558_RS06585 1371842 .. 1371872 + -18.2  -3.68261   TTATACTGCGTCCCA       GCCCGCCCAGGCCA GTT TGGCCCTGGCGGGC       TTTGCGGTGTTCTAG 100 72
D558_RS06590 1373083 .. 1373100 +  -6.9  -3.75153   AGAGCCGGCTAACCC             GGCGGCG GAAA CGCTGTC              TTTAGATTCAAAGGA  63 147
D558_RS06595 1373535 .. 1373564 + -17.3  -4.62069   GCAACGCCATAAGCG       GCAAAAGCGGACT TTCG GGTCCGCTTTTGC        TTTTTGGCGTCAACG 100 42
D558_RS06605 NONE
D558_RS06610 1376445 .. 1376461 +  -5.7   -2.6381   CGCCGGCCTGCGCGG              GCCCGCG TCG TGCGGGG              TAGTATGGCGGTTCT  46 55
D558_RS06615 1377684 .. 1377735 + -11.4  -3.02511   GGTTTGACCATGACC ATGTCGGCGCCTTCGGCGAGGTCG CCGG CGACCTCGCGCAAGGCCTCGTCGA TATTGGCCGGATCCA  65 288
D558_RS06630 1380050 .. 1380066 +  -9.3  -3.61103   CAGCTGTCCAGGAAA              GGGGGCC GGC GGCCCAC              TTTCCCCTGCCATTG  69 91
D558_RS06635 NONE
D558_RS06640 1383653 .. 1383664 +  -7.2  -3.34404   CCATGACTTCGGCAG                CGCG GGGG CGCG                 TGTTGTAGTTGCTGG  55 190
D558_RS06650 1385413 .. 1385448 +  -7.5  -2.71731   GCGTGTAAATGCACG   CGAGGCCGGGTCGCTCC CGCA GGAGC--CCCGGCCACA    TGCTTCAGAACTGGA  51 33
D558_RS06660 NONE
D558_RS06665 NONE
D558_RS06670 1390966 .. 1391016 +   -12   -5.4505   ATTCGCCGTGCTTTT CCCGCCCATTGTGATGCGATTCGG GGCAA CCG--TCGCATCAGAGTTGGCGGG TTTTTTCTTGCGCGG 100 104
D558_RS06690 1397265 .. 1397293 +   -19   -3.3482   GCTTGGTCCGCCGAA        CACGCCGGTCTT CGCAT AAGACCGGCGTG        TTCATTAAGGCCTTC 100 130
D558_RS06695 1397932 .. 1397987 +  -9.3   -5.1675   CCCGAAATGTAAAAA G-GGGTCCTG-AAATTCATTTCTAATC AATA GGTTAGATAAGAATTTACAGGGCCCTC TTTTTTGCTGCGTCG 100 53
D558_RS06700 1399042 .. 1399076 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 308
D558_RS06710 1400753 .. 1400776 +   -16   -3.1506   AATCCAGGCGGGCCA          GCGC-GCGGCG CGC CGCCGCAGCGC          TTCGTGCCCCCATTT  82 378
D558_RS06720 NONE
D558_RS06725 1404301 .. 1404311 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 43
D558_RS06730 1405736 .. 1405757 +  -2.9  -3.66995   TCTGAGCGCGTGGCT           GGCCACGCTG CTG CTGC-TGGTC           TTCCTGTTTTTTCCC  52 447
D558_RS06740 1406641 .. 1406651 +  -8.2  -3.37164   GGCGGTGTGGCTGAC                 CGGC GCT GCCG                 TCTTGCTGTTTTTGC  61 358
D558_RS06745 1407547 .. 1407573 + -10.8  -3.14132   GTCGGTTACCCCCTG         CTGGCCGTCGTC GAC GACGACAGCGAG         TTGATAGGCCCACAG  63 328
D558_RS06775 1415635 .. 1415648 +  -3.7  -3.85698   GACCGTGATCCTGGC               CGGTG TTGC CCCCG                TTTCTGCGGCCCGAA  57 52
        argD 1416948 .. 1416970 + -15.6  -3.52204   GTTTTCGTATCCTCC           GACAGCCGCG TCA TGCGGCTGTC           TTGCTTTGGAGATGC  88 43
D558_RS06785 1417462 .. 1417477 +  -4.6  -3.23395   GCATGGGAGCGGTCA              GGCCAC CGCC GTGCCC               TTCCTGGTCGTCGCT  49 255
D558_RS06815 1425423 .. 1425468 + -11.8  -3.54424   CATGATGATGCCGCG CCG-ATACAGTGCGCCCGCTCC CAGC GGCGCGGGCGC-CTGGCTGCGG TTTGCGCCCGTGGGC  75 318
D558_RS06825 1427545 .. 1427602 +   -12  -2.77523   CTGCCCGGCCCTAGC GCGGCCATCAGCCGGCCGACGTCCTGCGC AAA GC-CAGG-CGT-GGCCAGGTGAGAGCCGC TGATGTTGATGGCCA  65 464
D558_RS06850 1432409 .. 1432431 + -13.4  -5.28778   GGTGAGGCAATGTCG           CCGGTCTGAC AAT GCCAGACCGG           TTTTTTCTGCATACT 100 36
D558_RS06855 1432894 .. 1432915 +  -4.3  -4.24204   CTGCGACCGCTCGCC           TCTCGCAGC ACCT GCGGCTAGA            TTTTCGCTATCCCTG  62 118
D558_RS06860 1434546 .. 1434570 + -17.9  -4.13995   GTGTGGTCGAAAAAA          TGCCCGGCTCG CGC TGAGCCGGGCA          TTTCATTTCTGCGGC 100 43
D558_RS06875 1438864 .. 1438875 +  -4.4  -5.01732   CGAGTCGCACGGGGG                GTGA TTCG TCAC                 TTTTTTCAAGGAGTT  80 60
D558_RS06880 1439276 .. 1439289 +  -9.5  -5.62219   GCGCGCCCGTCAAGA               CGCCC TGCG GGGCG                TTTTTTTCGTCTGTT 100 48
D558_RS06885 1440495 .. 1440505 +  -6.8  -3.55444   GCTTTCTTATTGCAC                 TCGC AAA GCGA                 TTTACCAAATGCGGG  60 223
D558_RS06890 1441267 .. 1441284 +  -4.7  -3.44146   GGGAAGCGCACCACT             GCCGGCG GTTG CGCTGAC              TTCCTTGTAGAACGC  53 205
D558_RS06920 1445809 .. 1445826 +  -6.3  -2.83715   TGCGCGCGACGTTTA             CG-CCATG GCG CATGGCCG             TGTCGTGATGCTCGA  47 438
D558_RS06975 1453931 .. 1453950 +  -7.8  -5.30686   TGACCAGAGGCGGGA            TGCGCTTC TAGT GAAGCGCC             TTTTTTGTCAGTGTT  93 38
D558_RS06980 1454815 .. 1454829 +  -5.7  -3.72576   GAAAAACGTAAGAAC               TGAGC TCTAC GCTCA               TTTCATAAGAACACG  58 136
D558_RS18155 NONE
D558_RS06985 1456088 .. 1456122 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
D558_RS07020 NONE
D558_RS07025 1463280 .. 1463300 +  -9.6  -3.66654   TACGGGCCTCTTTGA            GCGGCGCC GGCAA GGGGCCGC            TTTGCCATTGGGCTG  72 72
D558_RS07050 1468113 .. 1468124 +  -5.8  -5.00616   GCTACACCGGCCATG                CACG CTGC CGTG                 TTTTTTGACACGGGA  83 162
        mscL 1473144 .. 1473158 +  -8.5  -3.17075   CCTACGCCTGTTTCA               CGCGC CAGAT GCGCG               TTGGGTTCGGAGGCC  57 216
D558_RS07095 1474965 .. 1474978 +  -8.1  -5.45726   GCCTTATGAAAAAAA               CCAGG CATG CCTGG                TTTTTTTCACGTGTG 100 53
D558_RS07105 1476652 .. 1476707 +  -5.8  -4.25104   CTTCCTGGCCACCTT CGGC-GCCAGCATTGGCCAGCAGCCGG AAG CCGCCTTCGGGCCCGGGATTGCAGCCG TTTTCCTGGGCCAGG  70 364
D558_RS07230 1500515 .. 1500544 + -16.5  -2.53263   CGTGCCAACCAAAAA       ACATTACCCGGCC AGGG GGCCGGGTAATGG        TCAGTTGGGCGTGCC  85 111
D558_RS07240 NONE
D558_RS07245 1503418 .. 1503433 +  -2.4  -4.61566   CGCTTGCGTTAAGGC              CTGGCC GGCG GGCCGC               TTTTATACTTTCGCG  66 29
D558_RS07250 1504186 .. 1504216 +  -6.7  -3.89346   CTTGGTCCAATTGTG      GCCCCGCGGCGCGC CCAT GCGTACC-CGTGGC       TTTCTACACTGGGGC  64 50
D558_RS07255 1505134 .. 1505166 +  -5.6  -3.25823   GGACTTGATCACCCG     GCGGGCCGGCTTGTCG TGC CG-CAA-CTGGTTCGC     TTGGTCTACACGCAC  51 449
D558_RS07265 1507067 .. 1507088 + -15.9  -4.98531   CCTTGCCAAGCGAAA           TGCCTGCCC CTTC GGGCAGGCA            TTTTTCATTTGCGGC 100 47
D558_RS07275 1510965 .. 1510984 + -16.4  -3.25341   GTCGGATTGACGACC            CGGCCGCC TCAG GGCGGCCG             TATTCATGTTGCGCT  89 31
D558_RS07285 1512608 .. 1512656 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS07290 1513112 .. 1513123 +  -2.2  -2.53876   CGGTGCCGTACTAAA                TCTG GGGG CAGG                 TCAGTTCCGGTCAAC  38 27
D558_RS07295 NONE
D558_RS07300 1513771 .. 1513781 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 60
D558_RS07305 1514786 .. 1514800 +    -7   -3.6422   ACAGTTCACAGCTAG               GCGCGG CCT CCCCGC               TGTTTTAAGAAGCTG  63 26
D558_RS07310 NONE
D558_RS07315 NONE
D558_RS07320 1517716 .. 1517747 + -13.1  -3.59979   GACCGCCGGCCGCAG     CGC-CATGCCCTCCG ACGG CGG-GGGCATGCGCG      TTTGGCATCAGCGCA  81 39
D558_RS07330 NONE
D558_RS07335 NONE
D558_RS07340 NONE
D558_RS07345 NONE
D558_RS07350 1521912 .. 1521926 +  -8.5  -2.69151   CAAGCTGCTGCTCGA               CGGGC GTTGA GCCCG               TGCTGTCTCAAGGCG  57 16
D558_RS07360 NONE
D558_RS07365 1523657 .. 1523678 + -17.3  -3.24422   CCCTGTCAGCCTCAT           CACGGGCGC CCTG GCGCCCGTG            TCATTTTTAAGAGTA  93 46
        glmU NONE
D558_RS07375 1526470 .. 1526496 +  -4.3  -3.54475   CCCGAGCGCTAAGAC        GCCGCGCCCAGC TTCC GGTCGGC-CGGC         TTCTATAATGGCCGC  51 29
D558_RS07380 NONE
D558_RS07385 1528924 .. 1528970 +  -3.5  -3.60792   GAGTTCGAACGCCTG CGCCGCT-GATCAGGCCGCCGGC GTG GCCGGCGG-CAGCTCCACCCGGG TTTCGAACTTGGCCC  49 17
D558_RS07395 1531552 .. 1531573 + -14.5   -3.6502   ACTCGTAAAAGTAGA           TAAGGCCGC TCGC GCGGCCTTA            TTTACGTCGGGCATC  95 143
D558_RS07400 1532044 .. 1532054 +  -8.2  -3.28712   ACGCGCTCCAGACGG                 CCCG GCC CGGG                 TTGTCAAAACGCACC  59 271
D558_RS07435 NONE
D558_RS07440 NONE
D558_RS07445 1542858 .. 1542888 +  -9.7  -4.11216   CCCTGTGGCTTGCCG      GCCTCGGCCTGTCG ATGG CTGCAGGCC-AGGC       TTTTGCGGCTGACGC  80 134
D558_RS07450 NONE
D558_RS07455 NONE
D558_RS07460 NONE
D558_RS07465 NONE
D558_RS07470 1546925 .. 1546973 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS07475 1547708 .. 1547718 +  -6.8  -4.02022   CTGGGTGTGACCATG                 CTGG CGA CCAG                 TTTGTCGTACTTCGC  68 306
D558_RS07485 1549664 .. 1549678 +  -4.2  -2.57944   GGCGAGCGCTGATTC               CAAGGA CTA TCCATG               CTTGATCTCATCATC  42 29
D558_RS07490 1550992 .. 1551007 +  -7.5  -3.31322   CAGCTACGCACCCGT              GCCGG CCATTA CCGGC               TTATGGCGCGTTACA  56 64
D558_RS07505 1553359 .. 1553373 +  -9.2  -3.92869   TGCCCGCCAGCGCCT               CGCGGT CCT GCCGCG               TTTCTCCCTGCCTGG  73 108
D558_RS07525 1557527 .. 1557537 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 173
D558_RS07530 1558551 .. 1558561 +  -2.4  -3.44487   ACCTAGCCTATGGCC                 GCCG ATT CCGC                 TGTTTGACTATCGTC  46 35
D558_RS07535 1559248 .. 1559268 + -12.5  -3.36569   GGGTCGGTCACCAGT            GCTGCGAGC GAG GCGCGCAGC            TGTTTGACCACTTCG  73 256
D558_RS07550 NONE
D558_RS07555 NONE
D558_RS07560 NONE
D558_RS07565 NONE
D558_RS07570 1568193 .. 1568215 +  -7.6  -3.95153   CGGCCGAGGATGCTC           GGCCTGCCGT GTG ATGGCGGGAC           TTTCTGGCTGATTCA  71 12
D558_RS07575 1569188 .. 1569201 +  -4.5   -4.2704   CCGTTCGCGGATCAA               TGCTC CTAT GGGCA                TTTCTTGCTGATAGA  66 365
D558_RS07585 1570311 .. 1570331 +  -8.3   -3.4052   TGATCGAAAAGAAGG            CCTGATATG CAG CGTATCGGG            TTCATTGGATTGGGC  61 21
D558_RS07590 NONE
D558_RS07595 1572261 .. 1572291 +  -6.8  -5.42259   ACGTCAAGCCCAAGA       GCCTGGGATCGG CCTACTT CCGGTCTGAGGC       TTTTTTTACGCCTCG  95 91
D558_RS07605 1574932 .. 1574955 +  -5.3  -3.68351   TCGATGAAGCCCGTG         CGGAGCGC-CT CGTG AGCGCGC-CCG          TTTGCCTGGTCACCG  58 11
D558_RS07610 NONE
D558_RS07615 NONE
D558_RS07620 NONE
D558_RS07625 NONE
D558_RS07630 NONE
D558_RS07635 1580834 .. 1580861 + -13.4  -3.10796   CTGGAGGGTTTGTGC        TGAGCGCAGGCC TTGC GGCATGCGCTCG         TGTTGCCTGCTGCAG  79 41
        panB 1584679 .. 1584692 +  -5.9  -3.53811   GGCGTCGGCCAGCAG               CCGCG CCAC CGTGG                TTTCGACGCGGTCGA  55 213
D558_RS07665 1587932 .. 1587960 +  -8.8  -2.53263   CACTGGCTGCAACAG       GCTCAGGGCAGCG GCAT CGCCGCCTTG-GC        TCACTTCGCGCTCAA  57 38
D558_RS07690 1592286 .. 1592299 +  -2.3  -3.90112   CCATGGTTTGCCGGT               CAGGG TATT CCCTA                TTTGGTTGCGAACGC  53 63
D558_RS07695 NONE
D558_RS07700 NONE
D558_RS07705 1595952 .. 1595973 +  -6.5  -3.05384   TCAGATAGCGCGGTG           TGCC-GTCCG GTG CGGCCTGGCA           TTGCGTGAGGACGCG  51 340
D558_RS07745 NONE
D558_RS07750 1605528 .. 1605544 +    -3  -2.78018   CATCCGGCGTATGTC             T-CGTGG CTTG CCACGCA              TCATTGATCCCCCAT  41 2
D558_RS07755 1606585 .. 1606599 +  -5.6  -3.57561   TTCCATTTCCTGACG               CAGGGC GCG GCGCTG               TTTGGCGGCTTCGAA  57 57
D558_RS07780 1609343 .. 1609368 +  -7.5  -3.57144   GTGTCTGACATGGTC         CGACGGTGGCAG GTC TTGCC-CCGACG         TTTGGCCGTGGAGCG  60 33
D558_RS07785 NONE
D558_RS07790 NONE
D558_RS07795 1613403 .. 1613441 + -18.3  -4.62441   CCTGCGGGTCCGTCG  CACGGCTGC-GATGTGCC ACTT GGCGCATTGGCAGCCGTG   TTTGTTTCTCTGGAG 100 65
D558_RS07800 NONE
D558_RS07805 1615797 .. 1615807 +  -2.4  -2.82623   CCTCTCAGCTATCGG                 AGCC GCT GGCA                 TGATTGTCGGAACCG  39 12
D558_RS07810 NONE
D558_RS07815 1617851 .. 1617865 +  -2.1  -3.06711   CTTCCGCCATCTCTT              GCA-CG GCCG CGATGC               TATGCTTTCTGCGTC  41 32
D558_RS07820 1618958 .. 1618985 +  -9.2  -2.52464   GGTGGTCTAACCGGG        TTCGTAGACAGG ACCG CCTATCTACGAG         TCCGTTGCCGACAGG  59 31
D558_RS07825 NONE
D558_RS07830 1620034 .. 1620059 +  -4.5   -4.1891   CGCTGGTACACCCGC         CGATTGCGGCC ATTC GGCCGTGCCCG          TTTCTCTTGCCGGAG  64 147
D558_RS07835 NONE
D558_RS07840 1621318 .. 1621364 + -10.2  -3.55444   GGTGACGACACGTTT TCCGGCTGG-CA-CACGCGGCA ACAGA TTCAGCGTGGTGTCCAGCCGGG TTTCGAAGGTGCGCA  69 505
D558_RS07875 NONE
D558_RS07880 NONE
D558_RS07885 NONE
D558_RS07890 NONE
D558_RS07895 1631847 .. 1631865 +  -4.5  -3.19226   AGAGCATTGAAGACA             TTCCAGG AGCGG CCAGGAA             ATTTCTTGTCCCATT  47 278
D558_RS07910 1633949 .. 1633984 +  -3.8  -3.28712   GCGCCTGAGGCGCGC    GCCTCAGGCCGCGTCGC TCA GC-ACGCAGTCCAGGGC    TTGTGGCGCGGACAG  47 33
D558_RS07920 1636573 .. 1636600 + -14.8  -4.12532   TGCCACGCCCCTGAA        CCGCCTGCCGGC CTCG GTCCGCAGGCGG         TTTGTCTATGGAGGC 100 74
D558_RS07925 1638318 .. 1638338 + -10.4  -5.75945   AGTGGTTTCCGTGTT            TTCCCCCG TTTTC CGGGGGGA            TTTTTTTTGCGGGCT 100 57
D558_RS07930 NONE
D558_RS07935 1640168 .. 1640179 +  -4.4  -4.56597   CCGTTTTCCAACATT                TCTG AATT CAGA                 TTTTTAACCAAGGAG  72 109
D558_RS07940 1640453 .. 1640483 +    -4  -3.02511   GCTAAAGGCCATGCC     CGC-CGGC-GCGAGG CGGG CC-CGCAGCTGGGCG      TGTTACGCGCCTGGC  45 36
D558_RS07945 NONE
D558_RS07950 NONE
D558_RS07955 NONE
D558_RS07960 NONE
D558_RS07965 NONE
D558_RS07970 1646062 .. 1646091 + -19.5  -4.08692   TGCGCGAACGGCAAG       CAAAACAGCGACC TTCG GGTCGCTGTTTTG        TTTTGACGCAGATTG 100 45
D558_RS07975 NONE
D558_RS07980 NONE
D558_RS07985 1649054 .. 1649067 +  -5.2  -2.88861   GAGCCAGTGTTTCGT               CCGG CGCTGT CCGG                TCTCTGACAGTGGTC  48 361
D558_RS07990 NONE
D558_RS07995 1653528 .. 1653542 + -12.8  -3.04144   CCTGTGCCAGCAGAG               CGGCCG ACT CGGCCG               TCTTGACCATCGGCG  71 281
D558_RS08050 1664582 .. 1664594 +  -3.3  -2.52464   AGGGCCTTGGAAACC                CGCAG CGC CTGCC                TCGGTTGGGCAGCCA  39 172
D558_RS08065 NONE
D558_RS08070 1668100 .. 1668121 +  -2.1  -3.32844   CGCGAAGCACTCAAG           GCATATGCC TGAT GGCACGAGC            TTGTGCGCTGGCCGC  46 14
D558_RS08075 NONE
D558_RS08080 1671022 .. 1671048 + -15.2  -4.57482   AAAACCCGTTAAAAA         CGGCGCTCAG TTCATGC CTGAGCGCCG         TTTCTTTATGCCTGC 100 46
D558_RS08090 1672686 .. 1672734 +  -2.9  -4.56597   GCACATTCTCCTGCG ATGGCGGCC-GCCTGAGGCGCT TTACGT AGCGTCGCGGGCCGGCAGCGGA TTTTTCAACGCGGCG  69 462
D558_RS08105 NONE
D558_RS08110 1676788 .. 1676798 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 77
D558_RS08115 1677912 .. 1677944 +  -4.8  -3.55622   GGCCTGGCAGGCGCA     CGC-CCTCGTCGGCCA GCA TGGCAG-CGATGAGCG     TTTCAACGCGTTCGA  53 135
        metX NONE
D558_RS08130 1680873 .. 1680895 +  -2.6  -2.52834   CCTTGCAACTGGCCC           GTCCGCGG GCCACCG CCGTGGAG           ATTGATCATCGCCTC  38 60
        ampG NONE
D558_RS08140 1683345 .. 1683379 +  -2.7  -3.88232   GCCACATCTTCTGAT    GGTGGCGGCCTTGGCC GCCC GATC-AGTCCGCTGCC     TTGTTCTGTCGCACG  53 27
D558_RS08150 1685075 .. 1685100 + -16.3  -4.23758   CTGCCGCGCCCAAAA         CAAAAGCTCCC TTGC GGGAGCTTTTG          TTTTAGATCTCGGGT 100 65
D558_RS08160 1687757 .. 1687773 +  -2.2  -2.71712   AATCGCGGATAATGG              CGGGGT TTGCC ATCCTG              ATTTGGAACCCGCCG  39 40
        pyrE 1688835 .. 1688865 +  -3.9  -4.73388   TGAGCGCAGCCAGCT      GAGC-GGCTTGCAC CGGC GCGTGGGCCAGCTC       TTTTTCGTCGCGATT  78 402
D558_RS08185 NONE
D558_RS08190 NONE
D558_RS08195 1694586 .. 1694600 +    -2  -3.46068   GAACCTTCCGCCAAC               TGAGCG GCG CGCCTA               TGTTTGAGTTCAAGA  46 23
D558_RS08200 NONE
D558_RS08205 1697638 .. 1697695 + -12.3  -3.85698   GTCAAGGCCTGAGGC GGCTCA-GGCC-GT--GATCTGAAGCCGC GCCA GCGGCTTCAGGTCGGACAGGCCTTCAGCC TTTGTAGGCCGCCGG  83 29
D558_RS08235 1703713 .. 1703745 +    -9  -4.58395   CGGCCCCCCGATCAG      GCCCTGGTTGCGAG TTTAT CCGGCGGCCAGGGC      TTTTTCCACCGTGGC  86 49
D558_RS08260 NONE
D558_RS08265 1707725 .. 1707741 +  -2.2  -4.21631   GCGGCCGGTTCGCCC              GTCATC ATGCC GTTGAC              TTTATTCACTACGTT  63 187
D558_RS08280 NONE
D558_RS08285 1711420 .. 1711434 +  -4.9  -3.55444   CCCTGATGGGGGCGT               GCGGC TATTT GCTGC               TTTGCAGGATCGCCA  53 35
D558_RS08310 NONE
D558_RS08315 1717430 .. 1717443 +  -5.2  -4.07568   GTCGGTGATCAACAC               GCCG ATGCCC CGGC                TTTTCAGAAAGCGCA  64 238
D558_RS08345 1722362 .. 1722396 +  -6.5  -3.32698   GGTTGTCTCATTCTT   G-GC-CCGGCCATGCC AGCGCG GGC-TGGCCGGAGCAC    TGTTGTATGGCCTGC  54 133
D558_RS08350 1724441 .. 1724485 + -15.8  -5.71983   TTTCAATACCGCTAT C-CGCGGCCGGTTTGCTCC AGATCAAA GGAGCGGATCGGCCGCGTG TTTTTTTGTCATTCG 100 46
D558_RS08355 NONE
D558_RS08360 NONE
D558_RS08365 NONE
D558_RS08370 NONE
D558_RS08375 NONE
D558_RS08380 1731572 .. 1731598 +  -4.2  -2.71041   GGACATTTGATCTGA         CGGTCCTGGCTT CGA GGGCCGGGCGCG         GTTATAGTTCGCCTT  43 26
D558_RS08385 1732500 .. 1732512 +  -4.7  -2.52516   AACGCTTCATTCATG                GCCGG GCG CAGGC                ATTCGTGATGCCCCA  43 340
D558_RS08395 1735112 .. 1735131 + -11.4  -5.22312   AACGCAAAGAAGCAA            GGCCTCCT GAAA GGGAGGCC             TTTTTTCATGTCCGT 100 139
D558_RS08405 1737360 .. 1737380 +  -5.3  -3.10901   GGAGGATTTGGGGGA            TTACGGGCC TTG GGCCGGCAA            TGTCTTAAAATGTTT  49 76
D558_RS08410 1741402 .. 1741454 + -34.4  -5.88197   CGCCACGCGACGAAG CCCCGCTCATCCGGCAGCATCCCG AACCG CGGAATGTTGCCGGATGAGCGGGG TTTTTTTATGTTTCA 100 44
D558_RS08440 1746495 .. 1746508 +  -2.3  -4.26076   CCAGCTTTTCGGCGA               CTTCG CGGC CGATG                TTTTCCTGGGACTCC  63 305
D558_RS08460 1750649 .. 1750659 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 183
D558_RS08465 NONE
D558_RS08470 1752709 .. 1752729 + -18.3  -5.38249   CCGTAGTACTTTGAA            TGCCCGCGC TTT GCGCGGGCA            TTTTTTCTGGTTCAT 100 52
D558_RS08480 NONE
D558_RS08485 NONE
D558_RS08490 NONE
D558_RS08495 NONE
D558_RS08500 NONE
D558_RS08505 NONE
D558_RS08510 NONE
D558_RS08515 NONE
D558_RS08520 1760893 .. 1760905 +  -4.8   -3.1352   GGGATTCGCTGGTGG                CGGA CGACA TCCG                TGTGTTGCGTTAGCA  47 0
D558_RS08525 NONE
D558_RS08530 1762705 .. 1762732 +  -3.4  -3.14963   AAAACGGTAAACTGC        TGGA-ATGTTCGC CCA GCGAGCCTGTCCG        TTCCGTCGTTGTCGA  43 69
D558_RS08535 NONE
D558_RS08540 1764928 .. 1764982 +  -7.4  -3.23274   TGGCGCTGTGGGCGC TGACGA-GATAGGGCGGTGCA-C-GTG TTGT CGCTGTTGCACTGTCATATCTTCGTCA TTGAGTTGTCACGAC  56 15
D558_RS08545 1765807 .. 1765855 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS08550 1766204 .. 1766228 +  -4.1  -2.60496   GAGTCGAGTACAACA          CCGATCGGCCT CAC AGCGCGCTCGG          ATATTTAACGCCGGC  42 154
D558_RS08555 NONE
D558_RS08560 1768096 .. 1768108 +  -4.1  -5.10767   CCTGGCGAGCTTTTT                GTTCA AGT TGGAC                TTTTTCTATTACCTG  87 385
D558_RS08595 1777875 .. 1777885 +  -2.4  -3.28924   TACCGTGCGGCGCGT                 GGCC TCA GGGC                 TTGTAGACCACGATG  44 77
D558_RS08605 1779584 .. 1779624 +  -6.1  -4.72272   AGGGTTGCAGCGGCA GC-GT-GC-CGGGCAGCCCG GCTT CGGCCAGCCCGAGCAACAGC TTTTTGATGGGAGCC  82 54
D558_RS08615 1784394 .. 1784429 + -16.2  -3.61398   CGCGCGGCCTGAGCC    GGGCCCGGC-CCTGATG CCA TGTCAGGTGCCGGGCTC    TTCTTGCCCGAACAA  90 29
D558_RS08635 1788336 .. 1788352 + -10.8  -3.11619   GAGCGGGTAGCTACG              GGCGGC ATGAC GCCGCC              TTGAATCCGTTATTG  66 88
D558_RS08640 1789554 .. 1789566 +  -4.8  -3.25823   ACAACAAGCGCATCG                CGCT GGTGG AGCG                TTGATATGAGCAGCA  49 9
D558_RS08645 1790677 .. 1790706 +  -5.6  -4.58395   ATCAACGATAGAAAC       GCG-CCGGCCAAC CTCGC GCTGGCCGGTCAC       TTTTTCGGGAGTACA  75 30
D558_RS08650 1791470 .. 1791496 + -12.3  -2.62184   TCCTTCATTGACGCG        T-CGCGCGGCCG GAGT CGGCCGTGCGCA         TGCTCTCCCGGACGG  69 30
D558_RS08655 NONE
D558_RS08660 1793007 .. 1793017 +  -6.8  -4.85599   CGATCACGCTGGCCG                 TGGC CAA GCCA                 TTTTTCTGAGGTGCA  84 6
D558_RS08670 NONE
D558_RS08685 NONE
D558_RS08690 NONE
D558_RS08695 1799253 .. 1799281 + -17.3  -2.72344   ACCTCTGCCCCTACC        GGCCGGCGCTGGC TGA GCCCGCGCCGGCG        TGCTTCAGGCTGGGG  89 327
D558_RS08705 NONE
D558_RS08710 NONE
D558_RS08715 1802467 .. 1802479 +  -7.7  -4.08767   TTTGTCCCCAATAAG                TAGGG GCT CCCTA                TTTTCCCCGGGTCGA  71 59
D558_RS08720 1803867 .. 1803885 +  -5.2  -3.17051   GCCGCCAGGTAACGC             GCCGTGAG CCC TTCACGCC             TGTTCATCCTGCGGC  49 29
D558_RS08725 NONE
D558_RS08730 NONE
D558_RS08735 1811645 .. 1811667 + -11.3  -3.03159   TCGTGTTGCCCGACA           GCGGAACGC TTTGC GCGTTCTGC           TCTTGGACCGGTTGG  65 159
D558_RS08780 NONE
D558_RS08785 NONE
D558_RS08790 NONE
D558_RS08795 NONE
D558_RS08800 1823763 .. 1823776 +  -3.1  -4.58395   TTAACGAAACAATTG               C-GGCT TTG AGCCAG               TTTTTGCGCAATAAC  69 85
D558_RS08810 NONE
D558_RS08815 1827571 .. 1827590 +  -3.4  -2.57683   GGAGATCTGAGGCCA            TGCAAGCG CCCT CGCAAGCA             ATTATGGAGCGATCT  40 31
D558_RS08820 NONE
D558_RS08825 1828834 .. 1828847 +  -4.5   -3.9578   CCGGGGGATTTTCCC               CACTG GCGC CGGTG                TTCTTTGCGGTATAT  62 79
D558_RS08830 NONE
D558_RS08835 NONE
D558_RS08840 NONE
D558_RS08845 NONE
D558_RS08850 NONE
D558_RS08855 NONE
D558_RS08860 1837147 .. 1837166 +  -5.6  -3.53811   GCCAAGGCTGGATTT            GGGTGGCC CGAC GGTCACGC             TTTCGCCAGCATAGA  55 517
D558_RS08870 1840112 .. 1840132 + -13.9  -3.05384   ATCGGCGCTGAAGGG            CACGCCCGC GGC GCGGGCGCG            TTCGGTCAGGCCAAG  76 336
D558_RS08890 NONE
D558_RS08895 1843999 .. 1844015 +  -2.1  -4.30719   CCTCAACTGAGCCCA              CGCGGCG AGC TGCTGCA              TTTGTTGTCGACCGA  63 55
D558_RS08905 NONE
D558_RS08910 NONE
D558_RS08915 NONE
D558_RS08920 1847000 .. 1847051 +  -5.6  -4.38712   TTCTGCAGGGCCTTC TGCCAGTTCGGGCCGCGCAGCGCCG CCT CGAC-CTCTGCGGCCAGAGCCAGCG TTTTCTGGACATCCC  73 415
D558_RS08965 NONE
D558_RS08970 NONE
D558_RS08975 1856826 .. 1856850 +  -2.1  -3.54741   CGGTCAACCGCTGTT          CGTTATTGGCT GAT AGCGAAAAATG          TTTGAGAAAATCCTG  47 13
D558_RS08980 1858203 .. 1858221 + -13.1  -5.49569   TCCCTGAGCGGCAAT             CGGGGCC CACGT GGCCCCG             TTTTTTGTATTGATG 100 34
D558_RS08985 NONE
D558_RS08990 NONE
D558_RS08995 1861445 .. 1861464 +  -9.2  -4.41047   TACTGTGAGCAGGGC            ACAGGGCC CGCA GGCCCTGA             TTTTGGTTGCACCCT  85 85
D558_RS09000 1862090 .. 1862119 + -22.9  -4.34402   CAGGTAGACCTTCCA       CACCCCTCGGGCG GCAA CGCCCGGGGGGTG        TTTTGCTGTAACGAC 100 55
D558_RS09005 NONE
D558_RS09010 1863702 .. 1863713 +  -5.8  -3.10245   TGAAGCGTTTTTTTT                GGCA TCTT TGCC                 TCTATCTTGGCCTGA  49 38
D558_RS09015 NONE
D558_RS09020 1866414 .. 1866439 + -17.6  -4.05208   GTTGTCGATAAAAAA         GGGCGCCGTG CGAATC CACGGCGCCC          TTGTTTCGTGTCCGT 100 46
D558_RS09060 1876984 .. 1876999 +  -2.6  -4.07568   GCATTCCCTATAATT              TGAAAT AAAC ATTTCG               TTTTGGGAAGAAGGG  56 47
D558_RS09065 1877605 .. 1877616 +  -3.6  -3.38522   GGTGCGCATTGCATT                GTGC CGGG GCGC                 TCTTTAGAGTGCCTG  49 152
D558_RS09070 1878268 .. 1878291 +  -3.2  -4.26202   CAAGGCGGCGGGCGT          GGAGTAAGGTT TCG GACTTT-CTCC          TTTATTAGTCGCTAT  64 78
D558_RS09075 1879745 .. 1879758 +  -3.1  -3.31322   GGTGTCAGGTGCTGC               GC-GAC CAG GTCAGC               TTCTGCCGGCTTGAA  47 291
D558_RS09085 1883546 .. 1883588 +  -8.3  -4.65895   TGAGCAGGTGGGGCT GGCCGGCGAGTTCGGCGCTG TTGC CAGCCTCGACCA-GCTGGCC TTTTTCCATCACGAC  88 57
D558_RS09140 1894466 .. 1894487 + -10.9  -5.94713   AAAACTGCGTTTTAG           TGCACGTCG ATAT TGACGTGCA            TTTTTTTTCTGCACT 100 51
D558_RS09145 NONE
D558_RS09150 NONE
D558_RS09155 1899278 .. 1899303 +  -8.2  -4.07885   AGCCGGCCAGCACGA         TGCGCGAGGT TGGAAT GCCACGCGCA          TTTTCGCGGGCAATC  72 361
        pmbA 1901646 .. 1901667 +  -2.1  -4.08064   GATATTCGGGCGGGG           CCCGGAACCC CTT GCGG-CCGGG           TTTTGCACAAAAATT  56 79
D558_RS09175 NONE
D558_RS09180 1902731 .. 1902760 + -15.1  -4.07568   CGTTAATCGCTGTAT       GCAAAAAGGCCTC GCAA GCGGCCTTTTTGC        TTTTGGGGCCGGCGC 100 35
D558_RS09185 NONE
D558_RS09190 1904881 .. 1904897 + -11.5  -2.87548   AATTGGAATTTTGAC              GCGCGGC CTG GCTGCGC              TATAGTGATCTTATT  68 27
D558_RS09195 1905362 .. 1905373 +  -7.2  -5.27335   GCCCGGTACATCAAG                CCCC TTCG GGGG                 TTTTTGTTTGGCGGG  91 49
D558_RS09200 1906692 .. 1906709 +  -2.5  -2.89564   GCAGGGGGTCGCCAG             CCACGGC TTGC GCCACGG              TCTGTGCCGTCAAGG  40 363
D558_RS09215 1910496 .. 1910515 +  -2.1   -3.3761   GTTAACTTGGTAGCG            TGACTGGC CTGGC GCCAG-CG            GTTTTGTTAAGGAGC  46 23
D558_RS09220 1911300 .. 1911314 +  -5.6  -3.53012   TTTACCAACGGTTCA               CGGGGT TTT GCCTCG               TTTGCGGCAAGGGAA  55 132
        glyA 1912672 .. 1912691 + -16.4   -4.4078   GCATTGCGGTATCTA            CGGGCCCC TGCG GGGGCCCG             TTTTCGTTGGACGGG 100 50
D558_RS09230 1913369 .. 1913382 +  -3.8  -2.60075   GGCGCAAATGATGCG               CGGA ACTGAA TCCG                GTTCGTTCGGCCACG  41 101
D558_RS09245 1916136 .. 1916146 +  -5.4  -3.42257   CGAACAATAGTCACA                 TCTC TGG GAGA                 TTCATATGTTTACGG  53 31
D558_RS09250 1916886 .. 1916913 + -15.6   -4.9218   TTGCTAGCACTCCAA        GGCCATGGCTGC CATC GCAGCGATGGCC         TTTTTCTCGTGCGTA 100 118
D558_RS09255 NONE
D558_RS09260 NONE
D558_RS09265 1922285 .. 1922299 +  -2.7  -2.52464   TCCGCAGCACCAGTT               CGCGC ATCAA GGGCG               TGACTTCGAGCACCG  37 450
D558_RS18175 NONE
D558_RS18180 1923884 .. 1923904 +  -3.9  -3.19778   CCTGGCAAAAAGCGA            CGCCCAAGA CTA TATTGGCCG            CTTTTAATGCCTTTT  47 252
D558_RS09280 1924870 .. 1924881 +  -7.2  -4.07885   CATTTCTGCTAGAAT                CGCG GATT CGCG                 TTTTCGGCAGCGATA  68 66
D558_RS09285 1925039 .. 1925061 +  -5.5  -5.90981   AGCCCTGCAAAAAAA          CCGC-CACGC GCCT GCCTGAGCGG           TTTTTTTTCGTCTGG 100 50
D558_RS09295 1926247 .. 1926260 +  -4.5  -3.11687   AATTCGCGCACCAGC               GGTGA GAGT TCGCC                TTCGGTCATCATTAC  45 411
D558_RS09305 1927695 .. 1927708 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 0
D558_RS09310 NONE
D558_RS18185 NONE
D558_RS09320 1929460 .. 1929514 + -22.3  -3.46602   TAGGAGGCGGGCTCA GGCCTGGGCATAGCG-GTTGCGCTGGT CGA GCCAGCGCAACACGC-GTACCCGGGCC TTGTCGTATGCCAGA 100 38
D558_RS09330 1930862 .. 1930872 +  -6.8  -3.60151   GTGCGCACCCCTGGT                 CCTG AGG CAGG                 TTGTGGTTTAGCGGC  60 56
D558_RS09340 1933420 .. 1933431 +  -7.2  -3.05384   GGGGCGGCGTGGCTT                GCCG ATTT CGGC                 TTGGATCAGCGGACC  51 337
D558_RS09355 1937136 .. 1937149 +  -5.3  -3.87815   TGAGGTCTGTTTTTT               TACAC GCAG GTGTA                TTTATAAGGCTGGGC  61 497
D558_RS09360 1938121 .. 1938164 + -13.9  -3.60296   CGGGGTCGCCCGGAG CCGTCATGTTGC-GGCCTGC GCGCG GCATGCCGGCGACCTGACGG TTTGCGCTGGGCATG  84 125
D558_RS09370 1939284 .. 1939301 +  -5.5  -3.10975   ATCTCGGGCAGCAAG             TTGCCCC TGGC GCGGCAA              TATTGACTGCTACCT  49 2
D558_RS09375 NONE
D558_RS09380 1941632 .. 1941649 + -11.3  -3.53091   CTGACGCTCAGTGGG             GCCGATG TGTC CATCGGC              TTTGGCCGCACCGAT  72 311
D558_RS09415 NONE
        rnhA NONE
D558_RS09425 NONE
D558_RS09430 1950937 .. 1950969 +  -5.6  -3.25823   GGACTTGATCACCCG     GCGGGCCGGCTTGTCG TGC CG-CAA-CTGGTTCGC     TTGGTCTACACGCAC  51 408
D558_RS09440 NONE
D558_RS09445 1955468 .. 1955482 +  -6.4   -3.3353   CTTCGGGCGCGCCCG               CTCAGG CTG CTTGAG               TCTCTTTGTGCGAGC  56 12
D558_RS09450 1955619 .. 1955638 + -10.7  -5.20534   CAAACACCTGAAAAA            GCCCGCT CTTGGC AGCGGGC             TTTTTCTTGGTTCAT 100 39
D558_RS09460 NONE
D558_RS09465 NONE
D558_RS09470 NONE
D558_RS09475 1963722 .. 1963740 +  -6.7  -3.53224   TCATGTAAACCGCGC            CTGTGCCG TAGC CGGC-CAG             TTTGCGCGCCAGATC  57 238
D558_RS09490 NONE
D558_RS09495 NONE
D558_RS09500 1968708 .. 1968722 +  -3.5  -3.48276   GCGCGCCGGATCGGG               TTGGC GGCGA GCCAG               TTCTCTGAGCGCGAC  49 477
D558_RS09520 1972350 .. 1972389 + -10.6  -3.53091   TTGAGCATCATTCCC  GCTCTGCGCGGGTC-TGGC CGC GACGCGGCGCGCGCAGGGC  TTTACCCCAAGGACT  71 37
D558_RS09525 1972785 .. 1972812 +    -7  -3.41693   GCGGGCATATTCCTG        CGTGCTGCCTGGG TTT TCC-GGTAGCATG        TTGATTCCTACTAGA  58 55
D558_RS09530 1973328 .. 1973367 + -32.4  -4.17048   TTTTCCTTTTTTGGG  CAAAACCCCGCGCACCGC TTAG GCGGTGCGCGGGGTTTTG   TTCTTTTGGCGGGCG 100 48
D558_RS18190 1973814 .. 1973862 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS09535 1974390 .. 1974416 +  -3.1  -3.18991   TGCGTACTATGCTAG        TTG-GTC-TGGAG ATT CTCCAGGACACGA        TGATTTTCCTGTTGT  45 99
        fusA 1976701 .. 1976722 +  -6.5  -3.53811   CCCGCGATCGCGATG           CGCTGC-GCC TGT GGCAGAAGCG           TTTGCAGACGATCCA  57 143
D558_RS09550 NONE
D558_RS09555 1979449 .. 1979461 +  -2.6   -4.2461   TACAAATCGGTCGCG                CCGT CGAAA GCGG                TTTGTTCCTGCGGAT  63 420
D558_RS09600 NONE
D558_RS09605 1987341 .. 1987359 +    -8  -3.15544   CCCACCGAGTCCTGA             GCGCCGGT GGC GCCGGCCC             TTGCTGGGCATCCGG  57 26
D558_RS09610 1988959 .. 1988994 + -10.4  -2.74605   TTCGCTTCGTATTCT    GCGT-GCCGGTCCCATT GAA AACGGGACAGGCCGCGC    TCGCTTTTGGGGCGC  63 119
D558_RS09615 NONE
D558_RS09620 1991091 .. 1991110 + -12.1  -5.96521   ACGGTTCAGCGTGTG            GGGCGGC CTTGGT GCCGCCC             TTTTTTTTGGTTCAT 100 48
D558_RS09635 1994258 .. 1994271 +  -2.3  -3.04792   CTGCCCCAACGCCGA               GATCG TCTA CGACC                TGTTCCACGTCGTGG  41 13
D558_RS09640 1994878 .. 1994890 +  -4.7    -5.252   GGCTGGAGGTATCCC                AGCGG CCG CCGCC                TTTTTTCTGAACATC  93 121
D558_RS09650 1997231 .. 1997249 +  -5.3  -5.03314   TTGCTTAATCTTCTT            CGACGAAG GTCT CTTCG-CG             TTTTTTGCGGATCGC  86 91
D558_RS09665 NONE
D558_RS09670 2000563 .. 2000573 +  -5.4  -3.61398   GAGTGTTGAGCTGGA                 GTGA TCG TCAC                 TTGTTGACGAACCCG  55 146
D558_RS09675 2001735 .. 2001746 +  -5.8  -3.15544   AAACAGTACCAAACC                CTCG AGCC CGAG                 TTCGTACAACTGCGA  49 243
D558_RS09685 2002792 .. 2002808 +  -3.7  -2.63102   CCGGCGAAGAAACCC              TGATCTC TAG GAAATCA              TCATGTCCGAATCCT  42 23
D558_RS09690 2003386 .. 2003407 + -14.5  -5.24531   CGGATGCCTAAAAAA           CAAAGCCCC AATC GGGGCTTTG            TTTTTTCTCGGCCGT 100 43
D558_RS09700 2005278 .. 2005290 +  -3.3  -5.74122   AAAAAGGTGTCAAAG                CCGTG ACA CACGA                TTTTTTTCTATGCTA  90 144
D558_RS09705 NONE
D558_RS09710 NONE
D558_RS09715 2007922 .. 2007960 +  -5.3  -4.25104   ACCAGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGTCCGACAGC  66 72
D558_RS09720 2011139 .. 2011152 +  -6.7  -2.93817   TGAACATACATCAAC               GCAAC CTCA GTTGC                TGCTTCTTCCAAATT  51 87
D558_RS09725 2011330 .. 2011364 + -21.7  -4.07687   CAGGCTTTTATTCCT     CAAAACCCCGTAAGC TATCC GCTTACGGGGTTTTG     TTTTGCGCAAAACAT 100 36
D558_RS09730 NONE
D558_RS09735 2012173 .. 2012221 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS09740 NONE
D558_RS09745 2013297 .. 2013331 + -19.5  -3.29144   GCCTGAGCGTCTCGT     TGCAGAAAAGCCGGC TTGCT GCCGGCTTTTTTGCA     TTCTGCCCGGGGTGC 100 35
D558_RS09755 NONE
D558_RS09760 2016599 .. 2016620 +  -8.7  -3.64822   TAGTCGCGCCAATGG           CCATCACCT TCGT AGGCGATGG            TTTGGGTCACGACGT  65 430
D558_RS18250 2018655 .. 2018674 +    -5  -4.68545   GAGTTCGCGGCGCAA            CATGCTGA TTTA TCAGGATG             TTTTCTCTGTTCCCT  72 159
D558_RS09770 NONE
D558_RS09775 2020299 .. 2020350 +  -4.3  -3.81287   CCAGGTGCCGCGCCA GCGGCCAAGGGGAGGC-GCCGCTGA TGGG TC-GCGCCAGCCTCATCGTTGCTGC TTTGCTGATGCTCTC  57 2
D558_RS09780 NONE
D558_RS09785 NONE
D558_RS09790 NONE
D558_RS09795 NONE
D558_RS09800 NONE
D558_RS09805 2029022 .. 2029047 +  -8.1  -2.66216   CGCACGATGATGCGC         GGGGGCCGCGT ATGA GCGCGCCCACC          ATTCTCATCATGGCC  53 11
D558_RS09810 NONE
        murC NONE
D558_RS09820 NONE
D558_RS09825 NONE
D558_RS09830 2034601 .. 2034611 +  -6.8  -3.14931   AGGGAGCGTCCCAAC                 TCCG TAG CGGA                 TTGATAGCCAGTCGG  54 104
D558_RS09835 2036008 .. 2036020 +  -3.3  -3.00153   CCTTTAATTTGGGGT                CGGAT GCC AGCCG                TATAGTGTTTCATTT  42 132
D558_RS09840 2037110 .. 2037134 + -11.4  -5.32882   CTAGACGGCTCGCGA          TGAGGGGCCT GTGCA GGGCCCCTCG          TTTTTTCTAATGATG 100 71
D558_RS09845 2037372 .. 2037391 +  -6.3  -3.53012   GCAAGACTAAGTAAT            CCGCGGC ACAGCG GCGGCGG             TTTGCCAGGGACGGA  58 27
D558_RS09855 2038931 .. 2038950 + -11.4  -3.65224   CGCTCCCTGAGAGGG            TTCGCCGC GCTC GCGGCGGA             TTATTGCGCTCCAGT  78 31
        secA NONE
D558_RS09865 2042581 .. 2042615 +  -5.7  -5.00895   GGCTCGTCTCATCGG    CCCTCGCCAACCTG-GT TCG ACGCAGGCCG-CGAGGG    TTTTTCTATGGTAAG  83 64
        hisZ 2045459 .. 2045469 +  -6.8  -2.55896   GATTTCCGGATTTCC                 CGAG AAA CTCG                 ATATTGATTCATAAC  50 76
D558_RS09880 2046799 .. 2046828 + -15.7   -3.9461   CCTCGGTTTGGGGCA       TCCGGCGCTGCGCC ACT GGCGC-GCGTCGGG       TTATTATTACGCACG 100 44
D558_RS09885 2047623 .. 2047635 +  -6.2  -5.38497   GAGCGACCCGGCTAG                CCGG GAATG CCGG                TTTTTTCCTTTGCCT  95 203
D558_RS09890 2047948 .. 2047977 +  -4.3  -3.16055   GCGCATGTATTGATC       TGATTCCCGAATC TATT GATTCCTGAATCG        TTCATACAAGATTTG  45 28
D558_RS09895 2050287 .. 2050311 +  -4.1  -3.88438   TGCGAACCTGTTTAT          TTGATGGGCGC GCC GCGCCGAACCA          TTGTATTTAGTATCG  57 302
D558_RS09900 2052929 .. 2052948 +  -2.1  -4.09243   CGACAAGCTCAAGAG            CTTCCTG GAAGGG CAGTAAG             TTTTAAGGGCCTCTA  56 7
D558_RS09905 2053043 .. 2053068 + -19.1  -5.07652   CTACCAAGAAAGACG         CGGGTCTCGGA GTAA TCCGAGACCCG          TTTTCTTTTCCGCAA 100 35
D558_RS09910 2053662 .. 2053710 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS09915 2054431 .. 2054443 +  -6.9   -3.2218   CCTGCCACCGAAAAT                GGCGG ATG CCGTC                TTAGTCGATATTAAA  56 292
D558_RS09925 2055832 .. 2055866 +  -3.6  -2.71011   AGGAAAGAGCGTGTA    GCCCGCATAGCCG CCTGCGGTAT CGGCTATG-GCGC     TGGTTGCACCAGCAT  40 253
D558_RS09940 2058022 .. 2058040 +  -5.3  -3.37761   TGCAACGCGCCATGA            TTG-CGCG TCAA CGCGGCAA             TTGAGTTTCTTCGCC  53 3
D558_RS18195 NONE
D558_RS18200 NONE
D558_RS09950 2059913 .. 2059925 +  -2.6    -3.524   ATAAGCATGCGGCGC                GCTG AGGCA CGGC                TTGTGTGCCTGGATC  47 21
D558_RS09955 2061172 .. 2061186 +    -7  -3.83502   CATTTCACCGTTGAT               GCCGAC GAT GGCGGC               TTTGCTATAGACCTC  64 353
D558_RS09975 2064399 .. 2064429 + -11.9  -3.02144   TGGCACGTCGCCCGC      TAGC-CTTGCCCCG TGAT CGGGGCATGCGCTA       TCTTCAGGAGCATGA  73 10
D558_RS09980 NONE
D558_RS09985 NONE
D558_RS09990 2067378 .. 2067391 +  -9.5  -3.01712   TGACAATATGGGCCA               GGGGG TCGC CCCCC                TGTTCGGCGCGCAGC  59 451
D558_RS10010 2069925 .. 2069957 + -23.7  -2.73483   AGCATTGTTCCGCCT      GTCAAAAAGCCACCC CCT GGGTGGCTTTTTGAC      TGATTGGAATACACT 100 90
D558_RS10015 NONE
D558_RS10020 2070931 .. 2070948 +  -6.9  -3.14931   CTAAGCCCTGGCGCG             GCTGCGT CTAG GCGCGGC              TTCGTGCGGCATAGC  54 37
D558_RS10025 NONE
D558_RS10030 NONE
D558_RS10035 NONE
D558_RS10040 NONE
D558_RS10045 NONE
D558_RS10050 NONE
D558_RS10055 NONE
D558_RS10060 NONE
D558_RS10065 NONE
D558_RS10070 NONE
D558_RS10075 NONE
D558_RS10080 NONE
D558_RS10085 2085011 .. 2085025 + -11.4  -5.90981   GCCGGCGTAAAAAAA               CCTCCC GTT GGGAGG               TTTTTTTTGATGTGC 100 31
D558_RS10100 NONE
D558_RS10105 2090612 .. 2090640 + -10.9  -2.52464   CGTCGTCGCGCTCAT        CACCCGCCTCGAC TGA GTTGCGGCGCGTG        TCGCTTGCCCAAGCA  65 10
D558_RS10140 NONE
D558_RS10145 NONE
D558_RS10150 2098941 .. 2098960 +  -3.4  -3.14132   AAAGCAGCACATGGC            CGCGATGC TGCA GCAGGGCG             TTCATGGGCACGACG  43 305
D558_RS10160 2103811 .. 2103821 +  -2.4   -3.3993   TCGAAGGGCGCCTTA                 GCCG GCG CGGG                 ATTTTTAAATGAGTG  46 55
D558_RS10165 NONE
        ligA 2107017 .. 2107042 + -12.6  -3.06302   ATAGCCGGTTATTGC         GG-CTGCCCCC ACTCG GGGGGCAGGCC         TTCGGTCAGCGTGAT  76 37
D558_RS10205 NONE
D558_RS10210 NONE
D558_RS10215 2113510 .. 2113523 +  -4.5  -3.48981   GGGTAGATACCGGGC               TGTGC AAAC GCGCA                TTCTGATACTCTTTT  53 137
D558_RS10220 2114798 .. 2114822 + -17.2   -4.2717   TCTCTGAGTGCCGGG          CAGGCGCTGC GCACA GCAGCGCCTG          TTTTGCTGACGTAGT 100 34
D558_RS10225 NONE
D558_RS10230 NONE
D558_RS10235 2118982 .. 2119011 +   -12  -2.62396   TCGCGCAACTGCTTG       CCCGCCTCGACG GTATAG CGGCGCGGCGGG        TCCTCTAAACGCCTG  64 443
D558_RS10305 NONE
D558_RS10310 2132464 .. 2132484 + -12.5  -3.53811   TATGCTCCAGGGCGG            CTGCCGCGC TCA GCGCGCCAG            TTTCGGCGGACTCGG  81 481
D558_RS10325 NONE
D558_RS10335 NONE
D558_RS10340 NONE
D558_RS10345 NONE
D558_RS10350 2141598 .. 2141636 +  -6.6  -3.08679   AACCTGAATTGCAGT   TTAAACAGGCGGCAATCC AAC GGGTTGCCGCCTATGCAC   TATTCCATAGAGCGA  52 34
D558_RS10355 2142363 .. 2142384 +    -8  -6.12328   GCTGCAGACTAGAAG           CCGCTGAT TACTTT ATCGGCGG            TTTTTTTTGTCTTGT 100 45
D558_RS10360 2143132 .. 2143180 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS10365 NONE
D558_RS10370 2143684 .. 2143704 + -14.7  -4.13648   GGGATACAAAAAAAA            CTGCCAGGC TTG GCCTGGCGG            TTTCTATGTGCGCTT 100 73
D558_RS10380 NONE
D558_RS10385 2149054 .. 2149088 +  -6.5  -3.33492   GGGGAATTTTCGCGC    CACTGGC-CGC-GTCTA TAG TAGATAGCGCGCCAGCG    TTATGGCCTGCCTAC  56 82
D558_RS10390 NONE
D558_RS10395 2151207 .. 2151240 +    -6   -4.3467   TGAGTTTTGTTCAAA    CC--AGCGGCTGGCGC CGGC GTGCCAGGCGCTACGG     TTTTCATCTACCAGT  73 519
D558_RS10415 2153654 .. 2153682 + -10.3  -3.88291   GAATTGAAATCAACT        CGGGCGGCATT CGCGTAC AATGCGGCCCG        TTTCTAGGAGTCATC  77 34
        rpmF 2153908 .. 2153918 +  -2.4  -2.71364   GAACTCGTAACCCGG                 ACCG CTT CGGC                 TGATTGCAGACCTGG  39 53
D558_RS10425 NONE
D558_RS10430 2156008 .. 2156018 +  -8.2  -3.06796   GGCCGGGCATGACGC                 CCGC CGC GCGG                 TTCGCTAACGTAAAG  57 44
D558_RS10435 NONE
        fabG 2157888 .. 2157917 +  -2.8  -2.90194   TGTTTTTTTCTCACG       GCCCGGCGTT TGCATTCCTC AACGCTTGGC        TATAATTCGCGGGAT  42 177
D558_RS10445 2158265 .. 2158311 +  -5.8  -3.89346   GTATAGCCATGCGAC CCGCGCGGGGACGCATCCGGCC GGGCA GGCCCGGTGA-T-TCCGCGTGG TTTGTCAGGTCAACC  61 97
D558_RS10450 NONE
D558_RS10455 NONE
D558_RS10460 NONE
D558_RS10465 NONE
D558_RS10470 NONE
D558_RS10475 2163718 .. 2163731 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 44
D558_RS10480 NONE
D558_RS10485 2165182 .. 2165230 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS10490 NONE
D558_RS10495 2165983 .. 2166005 + -20.6  -4.18506   GGCTGGTTGCCGCAA           GAGGGGGCGC ATG GCGCCCCCTC           TTATTTTGGCGCTGC 100 70
D558_RS18205 NONE
D558_RS18210 2167081 .. 2167108 +  -4.7  -2.95298   CACAGCTAGGCGTGC        CCGCGCTGCCGC CTGTC GCGGCC-CTCGG        TCTGTGCTACGTCCC  46 32
D558_RS10505 NONE
D558_RS10510 NONE
D558_RS10515 NONE
D558_RS10520 NONE
D558_RS10525 2172086 .. 2172106 + -12.5  -2.99545   TTGATGCCTGGCTTG            GACGGCCCG ACT CAGGCCGTC            TGTATCGTGTCTGCC  74 37
D558_RS10560 2179051 .. 2179087 +  -5.8  -2.73364   AGATCACACTCCGTC   GGTGATCAGTTCGCCGGC CCT GCCGGCAAACAG--CGCC   TGGTTGCGCTCGGCG  47 46
D558_RS10570 2181357 .. 2181374 +  -8.3  -2.88249   AAATCCGTCAACAGG             CGCGGCC TGCG GGCCGCC              TATCTAAGCAGTCTG  56 45
D558_RS10575 2182986 .. 2183011 +  -6.3  -3.41602   AGCTTATTCGTATAA         GTAATATGGGA TGGT TCTTATATTAC          TTATAATAAGCTGCA  56 126
D558_RS10580 2184006 .. 2184022 + -10.8  -5.96521   TCGTGCCGCCGCAAG              CCGCCC CTGCC GGGCGG              TTTTTTTTGGTTCAT 100 45
D558_RS10585 NONE
D558_RS10590 2185943 .. 2185959 + -10.8  -5.86061   GCCGCCCGGTTTAGG              CGCCCC TTTTT GGGGCG              TTTTTTTTACTGCCG 100 132
        prpE NONE
D558_RS10605 2189255 .. 2189272 + -12.7  -3.76224   GTCCGTACCGGATGA             CGCCGCT CGAC AGCGGCG              TTTGCTCAATCCAGG  84 45
D558_RS10610 2190529 .. 2190555 +  -2.9  -3.58527   TGCGAGGGATCGCGC         GCAGTCAGC AGGTCTGAA GCGGGCTGC         TATTCTTATGTTCTG  49 9
D558_RS10615 2192707 .. 2192727 + -14.7  -5.96521   CAGAGCATAATGAAA            GCCTGCGCG CAA TGCGCAGGC            TTTTTTTTGGTTCAT 100 59
D558_RS10625 NONE
D558_RS10630 2196069 .. 2196095 + -13.6  -3.62478   CCATCCAGAGCGTCA         GGCCAGCGGGGG GTC CAGCCGCTGGCC         TTTAGCCGTTGGTTG  84 96
D558_RS10645 NONE
D558_RS10650 NONE
D558_RS10655 2200625 .. 2200648 + -12.4  -5.30616   GTCGCCGGTGCCGAA          CCCTGTCCGT TGAC GCGGGCAGGG           TTTTTCTTTGGATCA 100 43
D558_RS10660 NONE
D558_RS10665 2202661 .. 2202687 +  -2.3  -3.53343   GCTGTCGTCGCCATT        TAC-CGATGATG CCTG CGTCATCGAGCA         TTTAGGAACGGAATT  47 17
D558_RS10670 2204594 .. 2204615 +  -8.6  -3.79419   GCGTATTGATGTTGT           GGTCGGCG CTTGGT CGCCGTCC            TGTTTTGTCCAACAA  72 32
D558_RS10675 2206239 .. 2206282 +  -2.3  -2.80796   GTAAACCAAGCAGTA AAC-GTGGC-CCGGCGGG-GCA TGG TGCGCCCGCCGGCGTCTCAGGA ATTTCAATGCTGACC  39 49
D558_RS10680 NONE
D558_RS10685 2208134 .. 2208155 + -15.1  -5.16237   CGAGAAAAACGGCAA           GGGCGCGGC GCAA GCCGTGCCC            TTTTTTCCTGAGATT 100 49
D558_RS10690 NONE
D558_RS10695 NONE
D558_RS10700 2211894 .. 2211919 +  -9.7  -3.01712   TGACGCGCACCGAAC         CCCTGGT-CGCC TGA GCCGCACCAGGG         TGTTGGCCGCAAGCC  62 12
        pyrG 2213945 .. 2213955 +    -4  -4.64861   TTGCGTTGCGTCCGC                 TTTG TTC CAAA                 TTTGTTTTAAAGGAA  70 167
D558_RS10710 NONE
         eno 2215552 .. 2215574 + -14.8  -3.22886   CCTTCGTTGATGTCG           GGCCGGGGTG TGA TGCCCCGGCC           TCTGTTATCTAGGAT  86 31
D558_RS10720 2216279 .. 2216292 +  -4.5  -3.71848   GCAATGCATCCTGCT               CGGCT TGAT AGTCG                TTGTTAATGGCCAGC  56 313
D558_RS10810 NONE
D558_RS10815 NONE
D558_RS10820 NONE
D558_RS10825 NONE
        sdhB 2235883 .. 2235906 +  -2.4  -2.97707   GGCAAGATCAAAGAA          CT-GATGGTCC GGC GGACGGTCTAG          TGCTTATTAGTATCA  40 2
D558_RS10835 2236175 .. 2236191 +    -3  -2.60075   CGCGCCATCATTGCG             CAGATGC AAGA GC-TCTG              ATTCATTACGAGGAA  40 8
        gltA 2237553 .. 2237570 + -14.1  -5.86332   GAGCGGCCAACCGAA             CCCGGCC TCTT GGCCGGG              TTTTTTTTAGGTTCA 100 65
D558_RS10845 2238851 .. 2238867 +  -9.5  -2.52464   GGCGCTTCGCGGGCT              GGAATCA GGC TGATTCC              TAGATTGCACAGAAC  55 210
D558_RS10855 NONE
D558_RS10860 2242521 .. 2242540 +  -9.2   -3.1637   AGCCATACGCAGAAC            TGGCGCGG CGTG CCGCGCGA             TTGATGGCCGTATCT  64 2
D558_RS10865 2243026 .. 2243036 +  -6.8  -3.16564   GCTGAAAAATGCCAT                 TGCC CTG GGCA                 TTGATGACGTAGCCG  54 11
D558_RS10870 2243376 .. 2243386 +  -2.4    -3.727   GAGTTCCACCTGTTT                 GCTC GCC GCGC                 TTTGAGTCTGCTGGC  51 78
D558_RS10875 2244394 .. 2244416 + -14.8  -2.82933   AGAAGTAAAACGTCA           GGGGCGCGCA GGG TGCGCGCCCG           TCTGCTGCCTTGAGA  80 33
D558_RS10880 2245545 .. 2245555 +  -8.2  -2.63596   GCCATAGGCGAGCGG                 GCCG TGG CGGC                 TGCTCTGGGGTGAGC  53 2
D558_RS10915 2258160 .. 2258194 +  -6.2  -4.28994   TGCCTTCTGCCCCTG     CTATCCGCCAACCGGG AAG CCCGTGTCGCGGAAGG     TTTTCCTGCATCGTA  72 278
        sucA NONE
D558_RS10925 2262395 .. 2262425 + -16.9  -4.54301   TGTAATCCAGATCGG      GGCGAAGCCGGGCG CGTG CGCCCGGCT-CGTC       TTTCTTCCTTTTTTC 100 36
D558_RS10930 2263910 .. 2263937 + -17.8   -3.6707   CCTGATCCTTCGCGA        CGCCGTCAATCC GTAA GGATTGGCGGCG         TTTGCGCTCTTAGAT 100 53
D558_RS10935 2265065 .. 2265092 + -11.3  -5.15969   AGTCGATGTTGCATC        TGACACCCCGC CTTTGA GCGGGGTGTTG         TTTTTTGGCTTGAGA 100 39
D558_RS10940 2265786 .. 2265797 +  -5.8  -2.71011   GCGCATGACCACGCC                GGCT TGCA AGCC                 TGGTTGCACGCCGAT  47 100
D558_RS10945 2266671 .. 2266712 +  -3.8  -3.74475   TTGGCCGCCTGGTAC GGAATGC-CCTGTGACAGA TCGAT TTTGCTACAGGAGTGTTCC TTGTCTTCCCTTTCT  54 77
D558_RS10950 2269241 .. 2269263 +  -5.5  -4.88918   ATTTGCGGATCTTGC           TTGCCGTGA TTTCC TCGCGGCAC           TTTTCTTTGGCATCA  83 94
D558_RS10960 NONE
D558_RS10965 2271541 .. 2271554 +  -8.1  -2.66435   GCTTGTTCCGTCTCC               GGCTG CTCA CAGCC                TCGTGTCATGACCAT  53 48
D558_RS10970 2272899 .. 2272935 + -19.6  -2.76261   AACCGTGTGTTGACG    GCATGAGAAGACCGCC CGAGT GGCGGTCTTCTCATGG    GTTTAACGCTTCAGC 100 40
D558_RS10980 2277562 .. 2277585 + -15.4  -3.72893   AATGGCGGAAAAAAA          TAGGCTTGCC CATG GGCAAGCCTA           TTTGCTCAGGCGCTG  95 48
D558_RS10990 NONE
D558_RS10995 2280239 .. 2280255 +  -7.9  -2.66326   CAAGCCGCGTTGCAG              TGCCGGG TTG CTCGGCG              TGGGTTTAACATTGG  53 47
D558_RS11000 2281959 .. 2281976 +    -7   -3.5891   ATACGTCAAAGTCAG             GGCTGT CTGAAA ACAGCC              TATTTCATTCTAAGC  60 16
D558_RS11005 NONE
D558_RS11010 2283428 .. 2283458 + -16.3  -3.53012   GTTGATAGTTTTTTT       GTAAGAAAGCGCC TTTAT GGCGCTTTCTTGC       TTTCGAGCGGCCCGA  90 46
D558_RS11015 NONE
D558_RS11020 NONE
D558_RS11025 NONE
D558_RS11030 2286719 .. 2286739 +  -8.1  -3.57144   CCTGGTAAAAAACAC            GCGCGTCTG TAC CTGTCGCGC            TTTGCAGGTGCAGGG  62 33
D558_RS11035 2287699 .. 2287732 +  -8.7  -4.08064   GACGCCAGAGGCAAC     GGCCCCGCTCAGCGGG CGG CCTGCACGG-GGGGCC     TTTTGCGGAACGCTT  75 53
D558_RS11075 2298733 .. 2298743 +  -2.4  -2.66326   CGCATGACGGGGGCG                 CGCC TTG GGCA                 TGGATTTCCAATTGA  38 34
D558_RS11080 2299333 .. 2299358 +  -3.9   -4.6821   GTGAGCCGATTGCGT         TGGGGTGGG CAGCAGGC CCCGCGCCA          TTTTGTGTTCACCTT  75 157
D558_RS11090 2301183 .. 2301206 +  -9.5  -3.59979   AGCGCCAGGCACAGG          CGTAGCCGG ACGGTA CCGGCCACG           TTTAGAATGCCCGCA  69 21
D558_RS11095 2302413 .. 2302432 +  -4.2  -3.93288   AAACCCTCAAAGCCT            TGCGC-GCG CAG CGCTGAGCA            TTTGCTTGCATAACG  57 9
D558_RS11100 2302960 .. 2302984 + -14.3  -3.57462   GGGCCGCCGCTGCGC          GTCAGGCAAGG TGC CCATGCCTGAC          TTTGGCGATCGCGTG  88 47
D558_RS11105 2304831 .. 2304854 +    -3  -3.60792   GCCAGTATGTAATGG          CGCCGTGCGCG CTG CGTGC-CGATG          TTTGCAGGTTCAGGG  49 29
D558_RS11115 2306062 .. 2306099 +  -2.7  -3.00389   CCTGATCCGGGTCAG   GCGTTACCGTGAGGCT TTCTTCT GGTCT-ACGGAGACGC   GTTTATCATCATGTT  40 36
D558_RS11120 2307049 .. 2307087 +  -8.7  -4.87893   AAAGAAGTTGCCTGC  GCCGCCCACGCGCGCG-CC GCC GGTCGC-CACGCGGGCGCC  TTTTTCGTTAGCGTT 100 440
D558_RS11135 NONE
D558_RS11140 2310335 .. 2310365 +  -5.3  -3.02144   CTTGAGCGCGAAGTG      AGC-CAAGGCGGCG ATGC CGCTGCCCTGAGCC       TGTTGCAGCCAGTGA  46 436
D558_RS11150 2311766 .. 2311814 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS11155 2312761 .. 2312793 +  -5.6  -3.25823   GGACTTGATCACCCG     GCGGGCCGGCTTGTCG TGC CG-CAA-CTGGTTCGC     TTGGTCTACACGCAC  51 518
D558_RS11175 2317669 .. 2317692 + -12.4  -2.62396   ATCAGGCCTGACTGA          CCGCCGCGTC ACAC GATGCGGTGG           TAGTCTGCCGGCGTC  69 30
D558_RS11200 NONE
D558_RS11205 NONE
D558_RS11210 2326424 .. 2326434 +  -5.4  -3.51924   AAAACCGGTCCCGCT                 GTCA TCA TGAC                 TTCTGTCAATAGAAC  55 40
D558_RS11215 NONE
D558_RS11220 NONE
D558_RS11225 NONE
D558_RS11230 2330491 .. 2330512 + -10.1  -3.63515   TTGTTTTTGTAGTAC           GCGGCGTTT TTCG GGACGCCGC            TTCTTGGCCCTGACG  71 58
        rpsA NONE
D558_RS11240 2332759 .. 2332790 + -17.5  -4.67353   GCGGTCGTCGCGACG      CAAAGCCCCTTGA TGTATT TCAAGGGGCTTTG       TTTTTGGCTGCCTGC 100 50
D558_RS11245 2333205 .. 2333220 +  -7.5  -2.94258   GGTCGCGCCGATGTC              GCCGC TCTAAT GCGGC               TGTGATTGCATTGCT  53 16
D558_RS11250 NONE
D558_RS11255 NONE
D558_RS11260 2336483 .. 2336498 +  -8.2  -5.02476   CATTCTGGAAGCCCT              GGCGGC GATG GCCGTC               TTTTTTCAGGAGTCT  90 107
D558_RS11265 2336893 .. 2336915 + -10.4  -3.40522   GGATCGCGGGTTTGG           CCGCCAAGCG GCT CGCCGGGCGG           TTATGATCGACGCAT  69 51
D558_RS11270 2337871 .. 2337893 + -13.5  -5.49809   CAGCGATAGCGAAAA           CGGTGAACC CTTCA GGTTCACCG           TTTTTTTCGGGTTTA 100 56
D558_RS11280 2340008 .. 2340024 + -10.8  -3.01243   TTGTGCAATGCAATC              CCCGGC AATCC GCCGGG              TAATTATTGTCTAGA  64 54
D558_RS11285 NONE
D558_RS11290 2341755 .. 2341776 +   -13  -5.40072   CAGGCATGTCAAAAA           GTCGCGGC CCATGT GCCGCGAC            TTTTTTTGCGCGGCG 100 50
D558_RS11295 2343667 .. 2343688 + -12.9  -4.06419   GCCTCAGGCTGAAAG           ACGGGCGGC GCGA GCCGCCCGC            TTGTTTATAGAACGG  91 43
D558_RS11300 2345584 .. 2345596 +  -4.7  -3.72893   ATGGTTTGCTTATTT                CCCCC TCC GTGGG                TTTGATGACAAAATC  56 72
D558_RS11305 2346307 .. 2346328 + -18.7  -3.95584   TTGCAGTGACCTCTG           CGGGCCGCC TTCG GGCGGCCCG            TTTGCTTGGTGCGGC 100 46
D558_RS11310 2347512 .. 2347526 +  -2.1  -3.14132   AAGGAAACGGGTTCG               CGATG AGTGC CATTG               TTCATCCGGCGGCGG  41 39
D558_RS11315 NONE
D558_RS11320 NONE
D558_RS11325 NONE
D558_RS11330 NONE
D558_RS11335 NONE
D558_RS11340 2353325 .. 2353335 +  -4.6  -4.72201   CGCGGGTGAAGCGCC                 CGGG CGG CCTG                 TTGTTTTTTGTCCAA  76 32
D558_RS11345 2355022 .. 2355042 +  -5.4  -2.71712   TTCCGGAACCTCTCC           GGCGCGTGC TCCG GCATG-GCC            ATTTCAGGCGCCGGC  47 205
D558_RS11355 2356877 .. 2356892 +    -9  -5.65513   TTCCGAGCTGAAAAG              GCACCT GAAA AGGTGC               TTTTTTTGGTTCATC 100 113
D558_RS11360 2358225 .. 2358279 + -11.6   -3.3353   TTTCGCCTTGCAATG CCC-GC-GTATGACGGGCTCACACTGCC GGT GGCAG-GTGCGCC-GTCGTGCAGCCGGG TGTGTTTCTCGCCAG  73 49
D558_RS11365 2359092 .. 2359118 +  -9.2  -3.01712   TGCAGCCATCCGAGC         CCGGCGCGAGTG TCA CCCGCGGGCCGG         TATTCGCAACCCACC  59 57
D558_RS11385 2362992 .. 2363002 +  -8.2  -3.29511   CTCCCAGGCGAGTGG                 GCCG CCG CGGC                 TTGTCAGGCCATGCG  59 233
D558_RS11390 2364072 .. 2364126 +    -7  -3.30124   TTGTGGCACGAGGCT GGCAATGG-GCAGGCCGCCGGCG CCGGCCAGAT CGCGCGCGGCCAGTACCAATGCC TTGTCCGGAATGCCC  55 385
D558_RS11400 NONE
        paaB NONE
D558_RS11410 2366913 .. 2366923 +  -2.4  -3.14344   CTGCAACGCACCTAC                 CCGG GAG CCCG                 TTGGTGAGCAGCGTG  41 8
D558_RS11415 2367378 .. 2367399 +  -3.5  -2.99727   GCTAGGCCCTGTATC           GTTGCGCGG ACTG CCGCGAGCC            CTTTGATTACTTCAA  42 36
D558_RS11420 2368524 .. 2368537 +  -2.3  -2.73542   GATCAGGAAACCTGA               GCGCT TAGC AGCCC                TGATTGCGAATTCAC  39 26
D558_RS11425 2370215 .. 2370234 +  -2.1  -3.53224   AAACCGCTTCCGCGT            CGTGC AAACCCGCCG GCACG             TTTGAGGAGCCGCTC  47 1
D558_RS11430 NONE
D558_RS11435 2371945 .. 2371977 +  -5.6  -3.25823   GGACTTGATCACCCG     GCGGGCCGGCTTGTCG TGC CG-CAA-CTGGTTCGC     TTGGTCTACACGCAC  51 466
D558_RS11445 2374293 .. 2374316 + -19.6  -3.53012   GCCCCAGAACAAAAA          CGCCGCGCAG GAAT CTGCGCGGCG           TTTACACAGGGAACC 100 120
D558_RS11460 2378266 .. 2378285 +  -3.4  -3.86897   ATCAGGAACATGATC            ACCGCCGT GGAG ACGACGGA             TTTGTGCAGCGTGAC  56 514
D558_RS11480 NONE
D558_RS11485 2383714 .. 2383724 +  -2.4  -2.84574   CCGACTGGATGCGTA                 ACCG TGC CGGC                 TGATTCGTTGGCGTA  39 12
D558_RS11490 2384525 .. 2384559 +  -2.9  -3.59979   TTAAAAGGCTTTATT    ATTTTGCCT-TTTGGC AATT GCCGAATAGGCAAGGG     TTTGCGATGAAAACC  49 132
D558_RS11495 NONE
D558_RS11500 2386779 .. 2386791 +  -3.3  -3.44051   CAGTTGGGATGCCGA                CAGCG CGA CGGTG                TTGTCATCATGAGGC  47 1
D558_RS11505 NONE
D558_RS11510 NONE
D558_RS11515 2388858 .. 2388903 +  -6.2  -4.20516   CACCGAACGCTTTGC CTGACATGGCCGGTGGCGTC-GA CGA TCTGGCGCCGCT-GCCA-GACAG TTTCTTCGATCGCGA  69 22
D558_RS11520 2389556 .. 2389594 +  -4.6  -3.54935   GGGCAGGGTGCCGTG  CTGCC--CGCCGGCTGAT CAATC ATCAAGCGGCGCAGGCAG  TTTGGCCCGCATTTC  53 11
D558_RS11530 2391723 .. 2391735 +  -6.9  -3.14564   GATCCAGCTGCGCAA                CGCTG ATG CGGCG                TTCGTGGCGCCATCG  54 20
D558_RS11535 NONE
D558_RS11540 2394117 .. 2394148 + -22.4  -3.24188   GCCGTTGATCCGTGA      TGCCACCGCCTTGC CCTG GCAGGGCGGTGGCA       TTCATAATCCTGTCA 100 33
D558_RS11545 2395085 .. 2395117 + -20.6   -4.3467   CAACACAAGCCCAAC      GGCCCCAGTCCGGT TCTGT ACCGGCCTGGGGCC      TTTTGATGTGGGCCT 100 100
D558_RS11560 2401359 .. 2401372 +  -2.3  -4.78839   GCAGAACAGAATGAT               GCGGT TGGC GTCGC                TTTTGTTGTGCGCTT  74 335
        dnaE 2405622 .. 2405639 +  -2.7  -3.81146   GTGGAGGTCAGTTAC             TGATGCAG CCT CTGCG-CA             TTGTTCATTCCGAGG  53 23
D558_RS11575 NONE
D558_RS11580 NONE
D558_RS11585 NONE
D558_RS11590 NONE
D558_RS11595 NONE
D558_RS11600 NONE
D558_RS11615 2415303 .. 2415320 + -14.1  -6.23209   GTTTCGCCGGTAAAA             CCGCCCG ACAA CGGGCGG              TTTTTTTTTGGTTCA 100 119
D558_RS11625 NONE
D558_RS11630 2417533 .. 2417546 +  -2.3  -4.20531   CAAAGCGGGATAGCG               CGGCC TTCA GGTTG                TTTTGCCTAAATGTC  59 28
D558_RS11635 2418597 .. 2418624 + -22.8   -4.1196   TCGAGTGTGAATGAA        GACAGGGCCGGC ATAT GCCGGCCCTGTC         TTTTGCGGATCCGTT 100 51
D558_RS11645 2420588 .. 2420612 +  -2.8  -3.21276   TACCATGCGAGATTC         GGC-GCGCAAT TGAT ACTGCGTAGCC          TGTTGTAGAGGGAGC  45 13
D558_RS11650 2421498 .. 2421517 + -16.4  -5.54192   CTGGCGCAACAACGA            GGCGGCCC TGCA GGGCCGCC             TTTTTTTAGGTTCAT 100 43
D558_RS11655 2423303 .. 2423313 +  -2.4  -3.54307   TCCAGCTTGCTCGGC                 CAGC GTC GCGG                 TTTGCAGCGCATGTT  47 500
D558_RS11680 2427960 .. 2427970 +  -2.4  -3.76839   AATCCTTCCCGAGCC                 CCGG AGA CCCG                 TTTGGCTTCAACTTC  51 85
D558_RS11685 NONE
D558_RS11690 NONE
D558_RS11695 2431062 .. 2431088 + -15.2  -3.64703   AGCCTTGTTTTCCGC         CTGGGTGGAACA CAG TGTTCCGCCCGG         TTTACATACGACAAA  95 45
D558_RS11700 2432027 .. 2432047 + -13.9  -3.90112   GTCTGTTTAGCGAAA            CGGCCACGC CCG GCGCGGCCG            TTTGCTTGAAGCGCC  93 52
D558_RS11705 NONE
D558_RS11710 NONE
D558_RS11715 NONE
D558_RS11720 2433862 .. 2433878 + -10.8  -5.84381   TCGGTAAGAAGAAAA              GCCGGC CTGGT GCCGGC              TTTTTTTCTTGATAC 100 55
D558_RS11725 NONE
D558_RS11730 2436179 .. 2436209 +   -27  -5.10029   TCAAGGCTCAAAAAA       CCCCAGCCCTGGCA GCA TGCCAGGGCTGGGG       TTTTTTGACATTGCT 100 44
D558_RS11760 NONE
D558_RS11765 NONE
D558_RS11770 2445161 .. 2445190 + -12.2  -4.67011   GAGACCCGCAGTTGA       TCCCCCTTTGTC TTGTAT GGCAGAGGGGGA        TTTTTCAATAAAGTT 100 58
D558_RS11775 2445939 .. 2445987 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 382
D558_RS11780 2446503 .. 2446543 + -24.1  -5.32944   TAGCAGACATTAAAA  ACCCCGCCAGTGCCGGATT ATT GATCCGGTACTGGCGGGGG  TTTTTTGATTCTGCC 100 87
D558_RS11795 2451125 .. 2451142 + -14.1  -4.06904   CCCCCAAAAAAATAA             CGGCGCC CTTG GGCGCCG              TTTCTCATTAAATAA 100 49
        tldD 2453718 .. 2453738 +   -14  -5.46657   AATCCCCCCGAAAAA            GCCGCCAG CGTCA CTGGCGGC            TTTTTTGTTGCCGTC 100 190
D558_RS11810 2454908 .. 2454921 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 44
D558_RS11815 2456216 .. 2456230 + -12.8  -4.09685   TAAAATGCCAGGCGG               GCCCGC GAT GCGGGC               TTTTCCCGGCTGACG  91 47
D558_RS11820 2457739 .. 2457768 + -23.7  -3.68351   AGTTGCGTGCGGCAA       GCAAAGGCGCCCC TCGA GGGGCGCCTTTGC        TTTGGATGGTGGAAA 100 43
D558_RS11835 2460541 .. 2460578 +  -6.3  -2.57211   CTGACTTGGCTCGAT   TCTGAAAGG-CGGATCCC GAT GGAATTCGTCCTGTCGGA   CTTATGCGACCAGGT  48 21
        glcE NONE
        glcF 2463259 .. 2463269 +  -8.2  -2.50291   TGACCTGGCATGCGG                 CCGG CCA CCGG                 ATTGATGGCGTACTT  52 367
D558_RS11865 2467287 .. 2467299 +  -6.2  -3.53444   GTGCGCGCAAGCGTC                CGGC GTTAG GCCG                TTTGCGCGCGCGTCC  58 120
D558_RS11880 NONE
        mnmA 2471410 .. 2471441 +  -2.8  -3.01712   CCGGCGCTCGGACGC      CGCTGCGGGCCG-CC GAC GGTCTGCCTGCACCC      TATTCAAAACGACGA  42 48
D558_RS11890 2472311 .. 2472337 + -16.6  -3.63627   GCCGCTTGACAAAAA         GCCCCTGGCACA TTG TGTGGCAGGGGC         TTTGGGCTGTGGAGG 100 47
D558_RS11900 2474490 .. 2474530 + -14.1  -2.62396   CAGACGGTATAGTGT GGCGCAA-GCCGGTGCGGC CTTCT GCC-CGCCGGCTTTGTGCC TCGTCTCAGGAGATC  78 29
D558_RS11905 2475009 .. 2475036 +   -20  -4.07568   TCGCTTTGTGCAAAA        GCATAACGCCCC ATCC GGGGCGTTATGC         TTTTGGGCGAACAGG 100 43
D558_RS18215 NONE
D558_RS11915 2477137 .. 2477155 +   -11  -2.65264   CCGCGTTTTGCGCCG             CAGGGCTG GAT CAGCTCTG             TGGTGTAAGTGGTCG  62 285
D558_RS11925 NONE
D558_RS11930 NONE
D558_RS11935 2480682 .. 2480724 + -11.2  -3.38966   CGCTTGAGCAGGCGC TGATAGTCGGGATGGCCATC GTG GGTGGCCACCCCCACGCTCA TTGTGACTCGCTTTT  70 135
D558_RS11960 NONE
D558_RS11965 2484422 .. 2484443 + -10.1  -3.42548   CGGAGCAAAACAAAA           GGCCCTCAC CGAA GTGAGAGCC            TTGATATTCCTTGGT  69 119
D558_RS11985 2488511 .. 2488523 +  -5.5  -4.13561   TGGCGACGGTCGGGG                CCATC GTC GGTGG                TGTTTTTTCAGCCGC  66 52
D558_RS11990 NONE
D558_RS11995 2490582 .. 2490594 +  -4.7  -2.84125   GGATCCTGGGTGGTC                ACCCC CGT GGGGC                ATTTGCCTGTGTGGC  45 380
D558_RS12020 2496276 .. 2496292 +  -2.2  -5.40072   GTATAAAAAAACCAA              CCTGAT AAAAG GTCGGG              TTTTTTTAAAAGCGG  84 136
D558_RS12030 2497192 .. 2497229 + -24.3  -2.71712   TTAGGCGAGACCAAA   ACAAAACCCCGGCTCGC TTGG GCGAGCCGGGGTTTTGA    ATTTCAACCAGGCAA 100 51
D558_RS12040 2500052 .. 2500073 + -17.3  -4.89567   CAAGGCTGTGCCCCG           GCCCGTCGC AGCC GCGACGGGC            TTTTCTGTTTTCAAA 100 83
D558_RS12045 NONE
D558_RS12050 2502410 .. 2502420 +  -8.2  -2.80338   GGCGCTTTCGCGCTG                 CGCG GGG CGCG                 TAATTCATACCTTGT  54 306
D558_RS12055 2502829 .. 2502842 +  -5.2  -2.76189   AAGACTTTGAGTGGC               CCCG CGCATA CGGG                TGCTTAGCTCAGTTG  47 131
D558_RS12060 2502937 .. 2502961 + -16.5  -4.98672   CGCATCAAGCTCAAG          GCCCTTGGACC CCT GGTTCAAGGGC          TTTTGTGTTTTTGCA 100 47
D558_RS12065 2504014 .. 2504027 +  -4.5  -3.09516   CATGGCCAGGATTCC               GTTCG ATTT CGGAC                TTAAGTGATACAAGC  47 4
D558_RS12070 NONE
D558_RS12075 2505485 .. 2505537 + -12.6  -3.32844   AACCCGCACGCTAAA CAACGC-AGGGGAGAGGTAGCGGCG GCTG CGCCGAAACGTCTCCCCGCGCGCTG TTGTAGGGTAGAACG  79 27
D558_RS12080 2506280 .. 2506317 + -10.3   -3.6682   AGCCTGACCTCGCCT   GAGGCGCACGCCGGGCC ATAA GGCCCGGTGCTCACCGC    TTTCCCTCCATGCCG  75 34
D558_RS12085 NONE
        trkD NONE
D558_RS12095 2510832 .. 2510848 +  -3.6  -4.68846   CAGGTGGCGCCGGTG              TGGGCC GCAGG GGCCTG              TTTTACTTTCTTGCT  70 221
D558_RS12100 NONE
D558_RS12105 NONE
D558_RS12110 2512931 .. 2512948 +  -8.4  -3.96148   GTGGACAAAAAAAAA             CCTGGG CCAGGA CCCAGG              TTTGTACTGCAGCCG  75 90
D558_RS12130 2517176 .. 2517210 + -13.5  -3.21551   TCCAGACGGGTTTCG     GTGGTGGCGCTGCCG ATATG CGGCAGCACCACGGC     TTGATCCGTGGTTTT  74 157
D558_RS12145 2519194 .. 2519208 +  -4.2  -2.77962   GATGGCCAGGCGACC               CGGCTA CCA TAGCGG               CTTTCACCTCTCAAC  43 14
D558_RS12150 2520414 .. 2520424 +  -6.8  -3.53091   GCCGCTGGCGTGTAT                 GCCA GGC TGGC                 TTTGGCAAGAGGGCT  57 467
D558_RS12170 NONE
D558_RS12175 2524220 .. 2524239 +  -4.8  -3.61764   CTCGAAAAGGGGAAG            CGGGCCGG ACGG CCTGCACG             TTTCACACTTGCTCA  53 42
D558_RS12180 2525297 .. 2525310 +  -3.7  -4.71426   GCATGGATTGATCAT               CGGCC AGTC GGCCA                TTTTCTTAGTAACGG  70 30
D558_RS12185 2526142 .. 2526159 + -11.3  -5.75945   CCGCCAATACAAAAA             GGATGCC GCGA GGCATCC              TTTTTTTTGCCGCAT 100 62
D558_RS12285 NONE
D558_RS12290 2542894 .. 2542910 + -13.7  -5.55769   CTTGCACGATCGAGA              CCCGGCT GTA AGCCGGG              TTTTTTGTTGTGCGC 100 66
D558_RS12305 NONE
D558_RS12310 2546757 .. 2546777 + -15.5  -4.65168   CTCGGCCACAGAAAA            CAGGGGTTC GTT GAACCCCTG            TTTTTCAGCTGTCAT 100 47
D558_RS12325 2548359 .. 2548385 +  -9.3  -2.64243   GCTCGCAGGCAAGAC         GCCCGCGTCGC ACGAG GCGACACCGGC         TGGTGTGACGTCTGC  55 219
D558_RS12335 2553378 .. 2553413 +  -3.8  -2.69528   GGCAAGTAACGCGCC    GAAGG-CGTCGGCTGGC TCT GTCTGGCGGCGTCCTAC    TGGGTTTGCCTTTGG  42 32
D558_RS12340 2555554 .. 2555578 +  -8.5  -2.90496   GAAGCGTGTACCTGC          CGCTTCGTGCG TTA CGGAGGAAGCG          TGATTTCCCAAGAGC  59 55
        clpA 2557899 .. 2557920 +  -2.9  -3.75824   ATGATGCCCTCGGCT           TAGGGTTCC AGTT GGAACACCA            TTCTCTTATCGCCTG  52 37
D558_RS12350 NONE
D558_RS12355 NONE
D558_RS12360 2561570 .. 2561600 +  -4.8   -3.7732   CGCAGTTTTGCCAGA      AGGTTAACCTCTG TCTTTT CAG-GGTTAACCA       TTATTCCTATCGAGG  56 19
        putA 2565539 .. 2565557 + -10.2  -3.50393   AAAACAGCGGGTTAG             CCCGATGC GAT GCCTCGGG             TTATCTCCAATAGGC  71 49
D558_RS12370 2566966 .. 2566976 +  -8.2  -4.12599   TCCAGGCCCGTCCCT                 GCCG TGA CGGC                 TTTTCCGCCCTTCTT  74 105
D558_RS12375 NONE
D558_RS12380 NONE
D558_RS12385 2569800 .. 2569816 +  -3.6  -2.61274   TCTTTCAACGGAGCA              GCCTTC ATGAC GCAGGC              CTTGCTTGAACTACG  42 16
D558_RS12390 2570845 .. 2570876 + -18.8  -2.78384   CTGGCTTTCGATAAT      GCACAACGGCGTCC CGGA GGACGCCGTTGTGG       TGTCATGGCAGCCGA 100 333
D558_RS12410 2574237 .. 2574250 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 25
D558_RS12415 2575544 .. 2575564 +  -3.9  -3.40597   TTTTTTCGCCTGGAG            GTCTTACAC TCC GGGTATGAC            TGTTTCAATGAGGGC  49 46
D558_RS12420 2575926 .. 2575950 +  -2.1  -4.17089   GCGCGGTGCCATACT          CCGCCAG CACGCGGCAGA CTGGTGG          TTTTGCCCGTTTGCC  59 105
D558_RS12425 2577615 .. 2577649 +   -10  -3.54543   CTTTTGATCTGGGTT     GCGTTGTCGCCCGT TTTTGGT GTGGGTGGCAACGC     TTTGCGGCAGTGGAT  71 173
D558_RS12430 2578064 .. 2578075 +  -3.6  -3.78329   CATCGCCTCCGTCAA                GGCG ATGA TGCC                 TTTCGCTTGATAAGG  54 4
        rplT 2578484 .. 2578514 + -19.8  -4.10429   TTCATCGCGGATCGC       TGCAAACGGGGCTC GAT GGGCCCCGTTTGCG       TTTTGAAGGCTAATT 100 49
D558_RS12440 NONE
D558_RS12445 NONE
D558_RS12450 2582333 .. 2582357 +  -7.1  -2.93073   TCCGATGATGATGAC          TCGGCAGAGTG ATA CGCTTTGTCGG          TAATTGTTAACGGCC  53 14
D558_RS12455 2582843 .. 2582878 + -12.6  -4.87133   GATGGGTGGCGCCGA    TCCCCGAAGACTGGAT ATCG ATCCGTGCTTCGGGGA     TTTTCTTTGGCGGAT 100 68
D558_RS12465 2584564 .. 2584590 + -19.6  -4.07859   ACCAGAAAGACAAAA         GGGGCTAGTGAA AAT TTCACTAGCCCC         TTTCCTATTTGTTGC 100 37
D558_RS12470 2585011 .. 2585027 +  -7.9  -3.06261   CCACGGATAGCGTAA              GGCGGTG CTG CAGCGCC              TCTTAGGCGTTGCCG  57 52
D558_RS12475 NONE
D558_RS12480 NONE
D558_RS12485 2588047 .. 2588058 +  -2.2  -2.54896   ACCTGGTGAAAAGCA                CC-GG GGT CCAGG                TCGATTAAGTACGGC  38 6
D558_RS12490 NONE
D558_RS12495 2588633 .. 2588647 +  -5.6  -3.93288   CGCAGGCGTGACGAT               GTCAGC AGG GCTGCC               TTTGCTTGCCTGCGA  61 30
D558_RS12500 2589528 .. 2589564 + -12.9  -3.46602   GGCGCCTGGCGCATC    CGTTGCAGGGACGCGCG CGG CGCGCTTGCCTGCGAGG    TTGTGCTCTGCGAGG  79 55
D558_RS12505 2590192 .. 2590222 + -19.1  -4.18018   TGAATCGCAGGCCCT       GGGCCGACCTCGA GTAAG TTGAGGTCGGCCC       TTTTGCATGGCGGAC 100 61
D558_RS12510 2591570 .. 2591602 +  -9.2  -3.61398   GTACTGCCCATGGTG     GGCGACG-TG-CAGGG CCA CGCTGCCATCGTCGCC     TTCTTCAACCCGGCA  68 297
D558_RS12530 2594826 .. 2594846 + -12.6  -3.37901   CAAGACGGCGATTTC            GCGCTCGA ACACA TCGAGCGC            TTCCTTGCGCTGTTT  73 226
D558_RS12540 NONE
D558_RS12545 2596332 .. 2596350 + -10.3  -5.24531   ATCTGGCAAAAAAAA             TCCCGGT TATGC ACCGGGA             TTTTTTATGGCCGCT 100 48
D558_RS12555 2596907 .. 2596922 +  -2.4  -3.90112   AGTTGCTCGTAGTAG              GGAGTC GGCG GGCGCC               TTTGCTTCCCGCCGG  53 29
D558_RS12560 2597222 .. 2597235 +  -8.1  -3.55622   TATGGAGGGGCTGGG               CGCGA TTCA TCGCG                TTTAGGACCATTGCG  62 7
D558_RS12565 2597621 .. 2597654 + -14.6  -2.71422   AACCCTGATCGTTAC     CAAGGGCCGGCC-AC CTTCC GTAGGCCGGCCCGTG     CTGTTTCTGGGGCTG  80 46
D558_RS12570 2598807 .. 2598825 +  -6.6  -3.16564   CAGCGTGATAGGAGG             CTGACCGG CGG CAGGTCGG             TTGATGCCGTCCAGC  52 22
D558_RS12575 2599186 .. 2599204 +  -6.7  -3.85698   GCGCTCTTGGACCTC            CAG-CGCC GTCA GGCGGCTG             TTTCTGCCCGCGCCA  64 95
D558_RS12590 NONE
D558_RS12595 2602506 .. 2602554 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS12600 NONE
D558_RS12605 NONE
D558_RS12610 2604490 .. 2604520 + -12.6  -4.56775   CTGACGGGCGCGCCA      CAGGCCTG-GCCG GATCAG CGGCGCGGGCCTG       TTTTTCAGCCGGCGT 100 37
D558_RS12625 2607033 .. 2607055 +  -4.6  -4.13945   CCTTGCGGCCGGGCA           GGGCGCGGCG TTT CGGCGACCCC           TTTTAGCATGGGGCT  64 324
D558_RS12640 2612043 .. 2612057 +  -4.2  -4.36914   TTCGCCTTCGCAGAA               GGCG ATGGAGC CGCC               TTTTCTCAGGCAGCG  69 150
D558_RS12650 2613420 .. 2613430 +  -8.2  -2.64099   ACTGGACTTGATCAC                 CCGG CGG CCGG                 CTTGTCGTGCCGCAA  53 410
D558_RS12660 2615152 .. 2615168 +  -2.2   -5.1861   TGGCAGGAATTCCTG              CAGAAC GAGGA GTTCGG              TTTTTTCCTGGTCAG  83 232
D558_RS12670 2616776 .. 2616789 +  -3.1  -4.42806   GTACCGGCGGCCCGG               GCTGGT AGC ACC-GC               TTTCTTTCCAACTCC  66 18
D558_RS12675 2617247 .. 2617299 +  -9.2  -3.91897   GCGCCGCCTGAGGAG TGCCCATCCTGC-CGCAACC-CAACC TTT GGTTATGGTTGCCCGCTGGATAGGCA TTTGTCGCTGAGCCG  75 30
D558_RS12680 2618794 .. 2618815 +  -3.7  -4.25104   ATGCCCTCCCAAGGC           CGC-TGCG GTAGTGA CGCAGGCG           TTTTCCTGGCGGCCA  66 207
D558_RS12695 2621586 .. 2621600 +  -5.6   -4.1822   GACATTAAAGCCTGA               GACCAG GAT CAGGTC               TTTCTTGCGATCGAC  66 324
D558_RS12750 2636687 .. 2636697 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 60
D558_RS12755 2637760 .. 2637770 +  -4.6  -4.36914   TCAAGTCAGCGAGAC                 GCCT TGC GGGC                 TTTTGTCGCCGGCCA  67 85
D558_RS12780 2644337 .. 2644359 +    -9  -3.21772   CAGATCTGTATTCGT           GCTTGCCCAC ACC GCGGGCACGC           TGTTGTCCAAGCCTT  59 323
D558_RS12790 2647123 .. 2647134 +  -2.2  -2.78816   ACGTCTACGCAAGCT                GTTC TCCT GAGC                 TATCATGCCCGATGG  39 16
D558_RS12795 NONE
D558_RS12800 NONE
D558_RS12805 NONE
D558_RS12810 NONE
D558_RS12815 NONE
D558_RS12820 2655577 .. 2655611 +    -7  -3.14344   TCGACCAGGATGTGC     CGGGTGAGTGCCGG GATGAAG CCGGCGCGTAGCCG     TTGGTGGGAGCGCTG  51 299
D558_RS12840 NONE
D558_RS12845 2660028 .. 2660059 +  -5.1  -3.16668   TGGAAGCCGTGTAGT      CGTGGTACGGCAC GACCGG GTTCTGTACCAGG       TTGGTGCCAATGTTG  47 314
D558_RS12860 2661745 .. 2661768 + -11.8  -4.08692   ATGACCGAGGCGAAG          CACTGGCGTCT GCC AGACGCC-GTG          TTTTAGCCCGGCTTG  86 133
D558_RS12870 NONE
D558_RS12875 2664270 .. 2664291 +  -5.8  -4.36914   CCGCACATTCCAGCC           TGACGCCG TTCAGC CTGCGTCA            TTTTGTCGCACCCCC  69 139
D558_RS12880 NONE
D558_RS12885 NONE
D558_RS12890 NONE
D558_RS12895 2668304 .. 2668324 + -15.4   -4.1899   GAGCAGCATGCAAAA            CGGCGCCC GGTGA GGGCGCCG            TTTTGCATGGGATCG 100 54
D558_RS12900 2668709 .. 2668725 +  -3.6  -2.78018   GGCGAGGTGGCGCAT              CGGTGA CCTGC TCCCCG              TGATTAGTACGAAAT  43 20
D558_RS12905 2669390 .. 2669438 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS12910 NONE
D558_RS12915 NONE
D558_RS12920 2670614 .. 2670644 +  -7.5  -2.70932   GCAGCAATGCACGGG      TCCTGG-CGTGGCT GCGC AGCCCCGTCCAGGC       TGGTTGCAGCAGCCG  51 101
D558_RS12930 2673275 .. 2673296 +  -3.6  -3.72374   CAGGGTTCTGAGCGG           CGGCGAGGC AGGTG GCC-CGGCG           TATTTCTTGGTACGC  54 81
D558_RS12935 NONE
D558_RS12945 2675180 .. 2675232 + -13.2  -2.80816   GATCGGGCCTGCCGC ACGGCCCGGCCGCCCGCATCGCAGG AGCC CCTG-GGCGATGGCGGCAGGGCCGG TATGGTGCGTGCAGC  73 67
D558_RS12950 2677329 .. 2677346 +    -2  -2.76422   CGATCCTGGGTGAGG             TC-GTGC GGCGG GCACAGA             GATTTTTTCGGGGTG  39 80
D558_RS12955 2677799 .. 2677818 +  -6.4  -2.62396   CGTGTGGCACATTGT            GAAGCCCT GATA AGGGATTC             TCATGTCCGGCGATA  48 16
D558_RS12960 NONE
D558_RS12965 2679305 .. 2679317 +  -3.3  -4.40561   GGCCCATGGGGATGC                GGTCG CGC CGGTC                TTCTTTTTCCGGCAG  66 140
D558_RS12985 NONE
D558_RS12990 2682855 .. 2682869 +  -7.1  -2.64155   GGTCGTAGACGGCGT               GCTCG ATGGG CGAGC               TGGGTTTGGCGGGAA  50 328
D558_RS13030 NONE
D558_RS13035 NONE
D558_RS13040 2692237 .. 2692254 +  -4.8  -2.80816   CTCGTAGAAACTCTT             CGCGGCC ATCGC GGC-GCG             TGTGCTCGGTGCGCA  45 207
D558_RS13070 2696168 .. 2696199 + -18.8  -3.52204   GTGCCGGCGCCTGCG      GCAGGCCATCGGTG ACTT CAGCGATGGCCTGC       TTCATTTCGCCATAA 100 48
D558_RS13080 2697321 .. 2697333 +  -5.5  -2.87468   CGGTCCGGTCTCCCG                TGCAG CCC CTGCG                TATCCTCTGCTGCCC  48 59
D558_RS13085 2699012 .. 2699032 +  -5.4  -4.37092   CCCAGCGCGTGGCAC            CCTGCG CTTCGGCGC CGCAGG            TTTTGTCCAGAAACT  70 259
D558_RS13105 2705147 .. 2705184 + -14.2   -4.7254   GGGCGCGATGAGCGG   CACCCCAAGAGTTGGA CACCCA TCCGGCCCTTGGGGTG    TTTTTCATGGCGACT 100 62
D558_RS13135 NONE
D558_RS13140 2711360 .. 2711390 +    -9  -3.34455   CCTCAACGGCGGGCA      GAGGAGGCAGGCC CGCTTT GGCC-GCCTGCTC       TTGGATTTGTCCTAC  60 246
D558_RS13160 2715389 .. 2715399 +  -2.4  -3.53811   CGAAATCTCCTGAAA                 CGCG GTT CACG                 TTTCGGCCGGCTGCG  47 28
D558_RS13165 2716510 .. 2716528 +  -8.8  -3.33737   CGCGACGACATCTTC             CTCGTCCA TCG TGGCCGAG             TTATCCAGATTGCTG  60 471
D558_RS13175 NONE
D558_RS13180 2719201 .. 2719231 +  -3.3  -3.24032   GAGCAATGCCTCCAA       CTCGGTACAAG AATTCCGGC CTTTTGCCGAG       TCTTGATTGGAGCAT  45 116
D558_RS13185 2719514 .. 2719553 + -13.6  -3.53444   TGCTTTCAGGGCAGT  TACCAAGGCGCGGCGG ATCTCGGC CCGGCGCGCCTTGCTA   TTTCAGAGCGCGTAC  83 43
D558_RS13220 NONE
        ispH 2727079 .. 2727098 +  -6.4  -3.32536   AGGCGGCTGGACCGC            CTGCAGGA GACA TCATGCAG             TTGTACAGCTACTTT  54 65
D558_RS13230 NONE
D558_RS13235 2727997 .. 2728019 + -12.7  -4.74103   GCACCAAAATTGAAA           GGGCAGCTC TCGAC GGGCTGCCC           TTTTTGCATTGGCGC 100 35
D558_RS13240 2728183 .. 2728208 + -19.1  -4.77757   GAGCCAAAGAATTCA         GGGCCATCCAC TTAC GTGGATGGCCC          TTTTGGTTTTTGCCG 100 35
D558_RS13255 2729758 .. 2729771 +  -3.1   -3.3517   GAATGGCGACACAAT               CGGTT ATAA AACTG                TCTTGTCTGATGCAT  47 39
D558_RS13260 2730934 .. 2730976 +  -2.8  -4.22041   ACTGGCGGCACGCTG TCTGGCATCGGTCTCGC-GCTC CCT GAGCCGCGCG-CC--TGCCAGG TTTCTATTCAGGTTT  60 241
D558_RS13270 NONE
D558_RS13275 2734710 .. 2734729 +  -9.3  -5.76949   GGTCGGGCAACACGA            TGGGCTG GGCATA CAGCCCA             TTTTTTTTGAGCGTA 100 408
D558_RS13280 NONE
        nusA 2736702 .. 2736716 +  -4.9  -3.14132   GACGAGGAATGATCG               CGCCG CTGCC TGGCG               TTGCTGGACCGCCCC  47 29
D558_RS13290 2739885 .. 2739917 +  -4.8  -3.73647   TGAAATCAAGGAAAT     TGCGCGT-ACCCTGT AAGA ACAGGGCCACGCGGG      TTGTTGCTACATGAG  56 10
D558_RS13295 2740312 .. 2740339 +  -2.7  -2.90472   GTCCCCGACGAGCCT        GAAGACCAGTCC TGATC GGGCTG-TCGTC        GCTTTTTTCTCTGTT  40 11
        truB NONE
D558_RS13305 2742987 .. 2743015 + -21.1  -4.72272   GCTGCCAGATAGAAA        CGCCTGAACCGGT ATT GCCGGTTCAGGCG        TTTTTCATGGGCGCA 100 73
D558_RS13315 2745462 .. 2745472 +  -8.2  -2.76671   CTGGGGCAGACAGCA                 GCGC CGG GCGC                 GTTTACCATGGCTGT  54 54
D558_RS13320 NONE
D558_RS13325 NONE
D558_RS13330 NONE
D558_RS13335 2749822 .. 2749840 + -12.4  -4.31329   CCCGTGAAGTGTGGG             CCGGGAGG GCT TCTCCCGG             TTTTCCGGTTTTTCC  93 34
D558_RS13340 2751026 .. 2751045 +  -4.3  -2.73676   ACAGATACACTGGTT            TGAGCCGT AAGCC ACGGC-CA            TGACTTTCCTTTCCG  43 97
D558_RS13345 2751589 .. 2751630 + -13.2  -3.61517   TCATCTGCGGCGTCG TCAAGTAAACAAAGGCCT CGTCGC AGGCCTTTGTTTACAAGA  TTATTGCCAGGCGCT  81 18
D558_RS13355 2753790 .. 2753819 +  -9.9  -2.77148   CAAGTAAGCGTCGCT       TATGGGGCCGCCC TGAT GGGTGGCCCTGAA        TCCTCTGTTCATACG  61 34
D558_RS13360 NONE
D558_RS13365 2755566 .. 2755586 + -11.1  -3.94812   CTGGGTTAATCAGAG            GGGCCGC CGTGGGC GCGGCCC            TATTTTTGACTGCCG  85 32
D558_RS13370 2756427 .. 2756456 +  -3.5  -2.64616   ACCTTGAAGGTTCGG       GCATGACCGACCCG GTA TGGGTCCCTC-TGC       TGCTGTCGCTCAAGG  40 34
D558_RS13375 NONE
D558_RS13380 2757809 .. 2757836 +  -3.2  -3.05844   ACGCCGAGGATGACA        CTGGCCGCGCTG AAAA TGGCGTGGACCG         TGTTGCCCTCGGCCA  43 51
D558_RS13390 NONE
D558_RS13395 2760601 .. 2760611 +  -4.6  -3.46647   TTAAGAAAGCTACTG                 CGCG ATC TGCG                 TCTTTGCTGCCTCCC  51 132
D558_RS13400 2761189 .. 2761205 +  -2.1  -4.62069   GGCGTGTTTTCACTC              CGTGAGG GAT CCATGCG              TTTTTCACCTCAGCG  66 202
D558_RS13405 NONE
D558_RS13410 2762425 .. 2762440 + -11.8  -3.29096   AACTCCTGAGCGGCG              CGCGGC GCGA GCCGCG               TTCCTCCTTCGTGAG  75 32
D558_RS13415 NONE
D558_RS13420 NONE
D558_RS13425 2767979 .. 2768014 + -16.2  -4.67755   GGTCGATGGACAGAC    CCCCGGGAAGTTGGAT GGAG ATCCAACCTCCGGGGG     TTTTTACATGAATGT 100 68
D558_RS13430 NONE
D558_RS13435 NONE
        uvrC 2771398 .. 2771414 +  -5.7  -2.63596   TTTGCATGGATGACG              GGCGTGC CTT GCGCGGC              TGATGTAGCATACGG  46 28
D558_RS13445 2772023 .. 2772050 + -19.2  -2.52464   ATCGCGTTGTGCCGA        GATGGGTGGCGC GCTC GCGCCGCCCATC         TCCATTACAGAGGCG  95 41
D558_RS13450 2773412 .. 2773425 +  -4.5   -4.3255   GTTTTTTGCAATAAA               GG-CCC CAC GGGACC               TTTATTCATTGGCGC  67 49
D558_RS13460 2775955 .. 2775976 + -10.1  -5.60993   GTAGGGTGGAGTGTT           TAGGGGACC GAGG GGTCCCCTC            TTTTTTTGTCGGACA 100 72
D558_RS13465 2776648 .. 2776661 +  -9.5  -2.63073   GGCCATCCATCAACC               CGCGC TGCG GCGCG                CTCTTGTTGCAAGGA  60 130
D558_RS13470 2777157 .. 2777171 +  -4.2  -3.24021   CCGATGCTCCAATTG               GCCGAT GAA ATCGAC               TTCAGTCTTTGGGGG  47 73
D558_RS13475 NONE
D558_RS13480 2779439 .. 2779464 +  -9.7  -3.92178   TGCGGCCCGGCGATG         CGGCCGG-CGAT TTC ATCGGCCAGCCG         TTTGCTTGGCGTGCT  73 508
D558_RS13495 2783349 .. 2783378 +    -5  -4.67904   TGCAGGAATCCGGTG       TCGGATCCGC GAGCGCGAAA GCGTATCCGA        TTTTTGCAGTTACTG  72 188
D558_RS13510 2786723 .. 2786734 +  -7.2  -3.40597   ATACGGGCGCAGCCG                CGCC CTCA GGCG                 TCTTTAAGTAAGACG  58 140
D558_RS13525 2788103 .. 2788117 +  -2.1   -3.1247   GTGGGCCAAGGGGCC               GGTAA TGACC TTGCC               TTCCGTGTCGAGCAT  42 78
D558_RS13535 2789209 .. 2789221 +  -3.3   -3.2362   GCCAGCCCTGTATGG                CGCGA CCG TAGCG                GTTTTCTCGAGGTTG  45 92
D558_RS13540 2789942 .. 2789952 +  -4.6  -2.50935   CAACGCCGGAACGAT                 CCGG TAG CTGG                 CTTGCTCGCTGACGT  43 505
D558_RS13550 2791229 .. 2791239 +  -8.2  -2.57344   AGGGCGCTCCGGTTC                 GGCG CGC CGCC                 CTTGTGAACACCATG  53 67
D558_RS13555 2791936 .. 2791970 +  -7.6   -2.9914   CGGCCGGGATACGCT     TGCCCAGCTCTTGCCG CAA CGGCAGTTGCCGGGCC     TGTATGTGCAAAATG  56 125
D558_RS13560 2792589 .. 2792602 +  -3.7  -2.90075   GCCAGATCCAGGTAG               CGCCG CCAT CGTCG                TCTCGTTGCGCCGGC  43 443
D558_RS13595 NONE
D558_RS13600 NONE
D558_RS13605 2798554 .. 2798572 +   -11  -3.01712   GGAAAAACCCGGATA             TGGCGGCA TGT TGTCGCCA             TATTGCAGGCGCGGC  68 69
D558_RS13610 NONE
D558_RS13615 2801525 .. 2801535 +  -2.4  -3.05384   GCTATAGGCAATGAC                 CCCG GTC CGCG                 TTGACTCGCACCAGG  42 433
D558_RS13625 NONE
D558_RS13630 2802511 .. 2802530 +  -7.8  -3.23899   GATACCGAAAGGTGT            CAACCGCT GCGG AGCGGTAG             TTCAGTTGGTTAGAA  59 54
D558_RS13635 2802604 .. 2802640 + -20.3  -3.53224   GCTCCGCCAAAAATT    CCAAAAGCCGCAGGGTC TTC GACCTTGCGGCTTTTGC    TTTGCGCGCCCGATC 100 32
D558_RS13665 2810157 .. 2810170 +  -9.5  -3.15726   ACAGTAAATTTTTCG               CCCGC AGGC GCGGG                TATTGAGTAGTTTTT  64 34
         upp 2810968 .. 2810999 + -13.6  -4.19817   GTTGAGAAAGCGAAC      CGGTAACCACCCGC TGTT GCGGGCGGCTGCCG       TTTTCGATCAGTGCG  93 153
D558_RS13680 2813446 .. 2813483 + -13.3  -2.84732   AGTAGCAGAAAGTAT   CCGGCGCGCCAGCCC CTTGCCCT GAGCGGGCGCGCTGG    TATGATGGATTTACC  76 36
D558_RS13685 NONE
D558_RS13690 NONE
D558_RS13695 2814684 .. 2814699 + -10.4  -6.23209   TGCAGCAAAAAAAAC              GCAGCC TCCG GGCTGC               TTTTTTTTTGGTTCA 100 47
D558_RS13710 2818503 .. 2818528 + -12.5  -5.08824   TTTGGCCGGCGCTGA         CCCCTCGGGCC GGCA GGTGCGAGGGG          TTTTTTGCATCCCGG 100 44
D558_RS13720 2820662 .. 2820674 +  -3.3  -3.90291   GCCGGCCCTGGGCCG                CAGCG ATA CCCTG                TTTCATTAACGACGT  55 56
D558_RS13725 NONE
D558_RS13730 NONE
D558_RS13735 2825085 .. 2825107 +  -6.8  -4.58395   GCGATGGGCTGCACG           GCCGCGGCGC CCA GTTCCACGGC           TTTTTCCACGATCCA  79 457
D558_RS13745 2827604 .. 2827614 +  -3.2  -3.21934   AGAAGGTGGCCGAGG                 CTGT CAA GCAG                 GTTTTGTAAAAGGAG  45 6
        gapA 2828698 .. 2828719 + -12.3  -4.91109   CCGGCATGGACAACG           GGCCGG-ACC CCA GGTGCCGGCC           TTTTTATCGTCCAGG 100 75
D558_RS13755 2829986 .. 2830019 + -16.7  -3.46659   TTGGCAGGCGTAAGA     TCGGGTCCTGGCCAT TTGT GTGGCCAGGCCCCGG      TTGCTTGTGCATGTA  90 57
D558_RS13760 2831914 .. 2831930 +  -3.5  -4.29432   CGTCGATGTCGACCA              GGCTGCG TAT CGGCGCC              TTTTCCTGGGCTTTA  64 207
D558_RS13805 NONE
D558_RS13810 2840620 .. 2840636 +  -3.7  -3.54129   CGACAGGTTCGGCCA              CTCTTTA CAA TAAGGGG              TTTACACAAGCTGTG  51 46
D558_RS13815 NONE
D558_RS13820 2841711 .. 2841730 +  -5.6  -3.05816   GCCTTTCGGTGGCGC            CGCAGC-GG GCC CCAGCCGCG            TTGGCTGGCCCGTGG  49 43
D558_RS13830 2844022 .. 2844035 +  -3.1  -2.89881   CTGCGGTATAGTTGG               GCGCAG TTT CT-CGC               TGTCTGGAATCGCTA  42 50
D558_RS13835 2844370 .. 2844422 +  -2.7  -3.57144   AGCCCTTGGTCGAAT CGGCCAATCTTTGCCTGTGAGA-CG GCGCG CGCTCTTGCTTGCAG-GCTTGGCCG TTTCGGCATGGCCGA  47 6
D558_RS13840 2845474 .. 2845506 +    -7  -3.55622   CGTGCGCGCGGCGAG     C-CTGGGCCAGGC GATCGGCG GCCTGGCGCAGCG      TTTCAGCGGGTTGGG  57 265
D558_RS13860 2847032 .. 2847044 +  -4.7  -3.02649   CATCGTCTGGCCACC                GCCGG CTG CCGTC                TCTCTATACTGCGCT  47 48
D558_RS13865 2847967 .. 2847993 +  -6.4  -3.01924   CCGATCGCGCAAAAA         AACGCCCGGC GCATGAG GCCGGGCGAA         TCTTCAGGCGAGGTG  52 10
D558_RS13900 2852229 .. 2852242 +  -2.3  -3.69395   CAGGCGTCGTCGTTG               CTGGC CGAG GCCAC                TTCTTCAGTCGTGGC  51 42
D558_RS13910 2854861 .. 2854882 + -14.5  -2.64155   AGTCTGAAGGTACCG           GAAAGCCCC TTGC GGGGCTTTC            TCGCTTTCCGGCACA  78 66
D558_RS13915 2855915 .. 2855930 + -11.8  -5.30616   GGCCCTTTCTGCAAA              CGGCGC GGCA GCGCCG               TTTTTCTTTGCCTGG 100 44
D558_RS13920 2856655 .. 2856673 + -11.6  -4.56775   CGGCGTTTATTTGAC             CGGGGCGC CTG GCGCCCAG             TTTTTCCCGCCAGCT  93 67
D558_RS13925 NONE
D558_RS13930 2859290 .. 2859310 +  -9.7  -2.78596   CAGCAAGAGTCGGCC            TCGATGCCA GCT TGGCATCGC            TATCATGGCCAGATC  56 415
D558_RS13945 2863274 .. 2863287 +  -3.7  -4.72272   GGGCGGGCGTTTCTG               CGGGG CCAT CCCGG                TTTTTCGTGCGGCGC  75 50
D558_RS13950 2865036 .. 2865056 +  -3.9  -3.85698   GCGATATGCTGTAGG            ACAGGCC GCTTCTA GGCCTGC            TTTCTACAGGACAAG  57 75
D558_RS13955 2865578 .. 2865617 +  -6.2  -3.87815   GCAGGCGCAGCATGG  CCGGCCACTCCATCTCGCC GAA GGGGCGCCGG-GTGGTCGG  TTTGTAAAGATGGCA  62 86
D558_RS13980 NONE
D558_RS13985 2872489 .. 2872504 +    -6  -3.54475   CGCCGTCCACCATCC              GCGCGC CTAG GCGCCC               TTATCTCATGAGCAA  58 16
D558_RS13990 2873499 .. 2873513 +  -4.2  -3.67976   GTGCGTGTTGATCAT               GCCC AGCGAAC GGGC               TTTGGCATTCATGGC  53 524
D558_RS14000 2874691 .. 2874701 +  -4.6  -4.27316   CGGCATTCTAGCATT                 GCTG CAG CGGC                 TTTTCGCTTCACGAG  67 485
D558_RS14010 2876035 .. 2876084 +  -6.1  -3.63707   GCATGAAGGCGCGCT GGCC-GCGCTGGGTGGGCGGCCTG GCC CTGGTCGCCGTGCTGGCGCTGGGC TTTGCCGGTTATCTT  61 35
D558_RS14015 NONE
D558_RS14020 2882522 .. 2882573 + -13.1  -5.27335   CGGTTTTCCCAAAAG GGGCGCCGCGTACGGAATGTCGGTC ATTG GACTGG--TTCTCTGCGCGGCGCCC TTTTTGTTTCCGACC 100 290
D558_RS14025 2884703 .. 2884724 + -14.4  -3.66803   TGCGCGCCGTCGAGC           CGCCGGCC GCTTGA GGCCGGCG            TTTCCCCTATTCCCC  95 12
D558_RS14030 2885061 .. 2885074 +  -3.8  -2.57132   CTGCCCCTGCCTCCG               GGCA TGAAGC TGCC                GTTCTGAGGCGAGCC  42 5
        recR 2885700 .. 2885719 +  -7.8  -4.93968   TGGAGCGCCGCTCGA            CCTGAGGCG TTG CGCC-CGGG            TTTTTCGTTCTGCCT  90 21
D558_RS14040 2887083 .. 2887105 + -11.3  -3.65832   GCACCAGCCCCGAAG           CAGACGGTC ATGCC GGCCGTCTG           TCTTTTCGCCGCTTT  78 54
D558_RS14045 NONE
D558_RS14050 NONE
D558_RS14055 2890226 .. 2890261 +  -6.8  -4.31433   CGGGTCGTTGGCGCC    GCTGCGGGCAGTCTCAT CCC ATTGGGC-GCCGGCAGC    TTTCTTGTGCCAATC  72 464
D558_RS14065 NONE
        carB 2895437 .. 2895448 +  -7.2  -2.62184   CGCTGCACCAGTAAG                CCCC TCGT GGGG                 TAGTATCCAGACGGG  50 27
D558_RS14075 2896420 .. 2896445 + -16.2  -2.62735   ACCGGCGACAGTTTC         CAACGCCCGC TTTGCC GCGGGCGTTG          TCATGTGCGGAGTCT  84 49
D558_RS14080 2897245 .. 2897267 + -12.1  -3.38046   TTCAGGGCTGCACAT           CATTGCCGA CCTCA TCGGCAATG           TGTTTGACGTCACCC  76 45
D558_RS14115 2904849 .. 2904882 +  -8.8  -3.41708   TCCGCGCTGCCGGGC     GTGCGAATGCGGCC ACGCGA GACCGCAGTTGCAC      TTGGCTTTTGGTTGC  64 92
D558_RS14120 2905411 .. 2905424 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 25
D558_RS14125 2906813 .. 2906836 + -11.7  -5.14698   ATGACACATTGACTG          CCCCGGTTC CGACCC GAGCCGGGG           TTTTGTTTTGGGTTT 100 141
D558_RS14130 2907733 .. 2907748 + -10.4  -3.64703   GCGGGAATAAAAAAA              GGAGCC TGGC GGCTCC               TTTGAGTACGGCAAG  75 230
D558_RS14140 2909144 .. 2909174 +  -6.8  -3.21465   GCGGGGCGCCAACCG       GCGCAATCTGCCTT GAC AGGGTAGAATGGGC       TATTGACTTTACATT  56 84
D558_RS14145 2911120 .. 2911163 +  -2.3  -3.39216   TGGTGTGGCGACCGG GGGCA-ATACGGCCGCGG CGGTGTAAT CCGCGGTCGTCCCTGCAC GTTTTTACATGGCAA  46 1
D558_RS14150 NONE
        glmM 2913375 .. 2913402 + -18.5  -3.41125   AGCGAAGGCCCTGAA        CAACGGCCCGC CTCCGA GCGGGCCGTTG         TTGTAACTATATGAA 100 46
D558_RS14160 2914712 .. 2914747 +  -7.4  -3.29144   AGCAAAGCCAGCAAC    TGCTGATCCGCCCGCG AAAA CCCGGGCATATCGGCG     TTCTCGAGGACATAG  57 383
D558_RS14170 2918195 .. 2918218 + -19.6  -2.52543   TCGCAAGGATGAGGA          GCAGGGGCGC GCAA GCGCCCCTGC           TGCATTGGGCAGCGT  95 48
D558_RS14175 2919447 .. 2919477 + -18.2  -2.87132   CAACAAGTACCCGGG       CGCGGTACCCGCCG ACA CGGCGGGGGCTGCG       TGTGTGCAACCGCGC 100 43
D558_RS14180 2920932 .. 2920957 +  -5.3  -3.87373   CCGAGTACGGCCAGC         GCGGCTGGCTGG CTC CC-GCGACCCGC         TTTCTGAACGATGTA  61 402
D558_RS14185 2922306 .. 2922316 +  -3.2  -5.40072   GCCTTCCAAACCCCC                 TCTC TGC GGGA                 TTTTTTTACGCCAAG  85 54
D558_RS14190 2922483 .. 2922507 + -10.7  -5.32944   CCATATATATCAAAG          GGTTAGCCGTA TTC TTCGGCTAGCC          TTTTTTGCTTCTGGG 100 38
D558_RS14195 NONE
D558_RS14200 NONE
D558_RS14205 2925002 .. 2925015 +  -3.8  -3.30124   GGTTGAAGTACTGCT               GCAG CCGGTC CTGC                TTATGGGCCGTGGCC  49 468
D558_RS14220 NONE
D558_RS14225 2927658 .. 2927670 +  -3.3  -4.06592   GGATTACCCTCGCCC                AGCAG GGG CTGCA                ATTTTTTTCTTGCAC  58 75
D558_RS14230 NONE
D558_RS14235 2928898 .. 2928909 +  -2.2  -2.59431   CGGTGCCGTACTAAA                TCTG GGGG CAGG                 TCAGTTATACGACGG  38 27
D558_RS14240 2929858 .. 2929875 +  -2.6  -4.08887   GTAGCGAATTTGATA             GCGGTC TTTGTC GACAGC              TTTGATTTCGCTACT  58 243
D558_RS14250 2930379 .. 2930394 +  -4.6   -3.8646   AGCCTTGGGATAGGT              GGCCGA AAAT TCGGCA               TTTGCGTTATTCATC  59 82
D558_RS14265 2932443 .. 2932469 + -15.3  -4.36595   GCAACCAAATTAAAA         GCCCTGATTTC CGACC GAAATCAGGGC         TTTTGCGTTTGGATA 100 34
D558_RS14270 2932877 .. 2932890 +  -3.7  -4.07568   CTTTGACGGCTCTGT               CGGCC TAGA GGCGG                TTTTGCACCGCGACG  60 18
D558_RS14275 2933292 .. 2933327 + -20.5  -3.09516   TCGGTCAGTCAGGGT    CAGCCCGCGGCAATG CAGTGC CTTTGCCGCGGGCTG     TTGCATAATCGGGCC 100 43
D558_RS14280 NONE
D558_RS14285 2934263 .. 2934278 +  -4.6  -2.98823   CAATGCGTATATAAC              CAGGGC GCTC GCCATG               TCTATCTCCCAGCAA  46 103
D558_RS14290 2935795 .. 2935808 +  -3.7  -4.90778   CATCCTCGTTGAAGG               CCGCG TTCT CGGGG                TTTTCTTTCAATACG  79 252
D558_RS14300 2937036 .. 2937068 + -22.1  -4.13767   AGCGATACCTGGAAA      GGGTTGAGCCCGGTG CAC TACCGGGCTCAGCCC      TTTTAGCGTGAGCGC 100 107
        recA 2942879 .. 2942912 +  -4.3  -3.69902   AACGCTCCGAAGATT     GAGCACGCCAGGGGG AGTT CCCTCTGGCTCACGC      TTTGCGGTGTTTCAT  54 24
D558_RS14325 2943873 .. 2943886 +  -5.9  -3.53012   CGACATGCCGCAAAT               CGGCC AGAG GGCTG                TTTGCGGAAACGGCC  55 421
D558_RS14335 2946862 .. 2946884 + -16.3   -5.5604   GGCGGGCCCGCTAAA           CCCGCACCG GTTGG CGGTGCGGG           TTTTTTCTTGGTTCA 100 46
D558_RS14345 NONE
        sucC NONE
D558_RS14355 2951083 .. 2951101 + -14.6  -5.86332   TCCGTCCCGAAAAAA             TCCGCCCT TCG AGGGCGGA             TTTTTTTTGCCTTGG 100 53
D558_RS14360 2952066 .. 2952118 +  -7.1  -3.28269   AAGCTGAACTACAAT CGGGGGTTGTGCCG-CTGTCTT-CCGC TGC GCGGAAAGGGAGGCGGC-CG-CCCCTG TTGCGTTTGAGGCTT  56 41
D558_RS14365 2952941 .. 2952966 +  -3.2  -3.96892   TGCAACAATCCGAAT         CGGGCCTCAGC CTGCT GCA-AGGCCTG         TTTATCCTGGCAATT  58 52
D558_RS14375 NONE
D558_RS14380 NONE
D558_RS14385 NONE
D558_RS14390 NONE
D558_RS14395 2958156 .. 2958191 + -16.9  -5.10208   CGCTTGCGACCAGGA    CGCGGCCGCGA-CGGT ACCCA ACCGATCGCCGCCGCG    TTTTTGTTAGGCTTG 100 71
D558_RS14400 NONE
D558_RS14405 2959198 .. 2959243 +  -5.4  -3.21276   CGCCGAGAAATAAAC TGGCTTTCGCCGCAACCTTCCG CACG CGGAGGGTTGCAGCTT--GCCA TGTTCTCAGGGGCGG  51 28
D558_RS14410 2960531 .. 2960558 +    -7  -4.43477   GAGCATCACCACCTT        GATACCTGCGCGC AGC GCG-GCAAGTGTC        TTTTCCTTGACTCCA  75 189
D558_RS14425 2963796 .. 2963806 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 184
D558_RS14430 2964789 .. 2964828 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  69 4
D558_RS14435 2965878 .. 2965888 +  -2.4  -2.52464   GCGGCTGACGCATGT                 CGCC GAT GCCG                 TGGCTTACAGCGGAG  38 44
D558_RS14440 2967171 .. 2967185 +  -3.5  -3.14564   CCGCGCCCATCTCGA               TCGCG CAAAT TGCGA               TTGATCAAACCCTCG  43 79
D558_RS14445 2967946 .. 2967966 +  -6.8  -2.64051   TGCGGCACGTTCTAT            GCCAACGC CGCCC GCGTTGCC            TCACTTATCTGCTCG  50 93
D558_RS14450 2968519 .. 2968531 +  -4.8  -2.53876   CTGAGTCCTCTCAAA                CCAG AGCAG CTGG                TGGATTCCCCTGGCG  43 37
D558_RS14455 2969323 .. 2969339 +  -2.9  -3.48924   TCATGCCGGAGGGGC              CGTGATG CTA CATCGAG              TTCTGTGCCGCATCC  49 21
D558_RS14460 NONE
D558_RS14465 NONE
D558_RS14470 NONE
D558_RS14475 NONE
D558_RS14480 NONE
D558_RS14485 2974022 .. 2974034 +  -2.6  -4.72272   GTTTGTTGCGTGCTG                GCCT TACGT GGGC                TTTTTCCTACGAAAG  70 168
D558_RS14490 2974945 .. 2974978 + -16.7  -3.13522   CTGCTGGGTTTGCTG     GGCCGTCGACGTGCGC TAG GCGCACG-CAGCGGCC     TGTTGATCCGGCCCT  89 121
D558_RS14505 2978235 .. 2978245 +  -6.8  -3.35438   TCGAATTGCTGAGCG                 GCCA CGA TGGC                 TTGTGCCATGTCGTA  55 162
D558_RS14520 NONE
D558_RS14525 2982004 .. 2982016 +  -3.3  -3.89614   GCCGGTTATGCGTTC                CGGCA CCC TGCCA                TTTATCGGAGTTGGG  55 137
D558_RS14530 2983153 .. 2983187 + -13.4  -3.38812   GCGCAGAACCAGCGC     CGTCAGCAGCGGGTCG CAA CGTGCCGCTGCAGGCG     TGTTGTTGCGCACGA  77 405
D558_RS14540 NONE
D558_RS14545 NONE
D558_RS14550 2989086 .. 2989109 +  -3.8  -4.10657   CAGGCGATTGAGGTG          CGGTGCCGTTG AGT CAATGGC-CGG          TTTTGGCGGGTGTGA  62 50
D558_RS14580 NONE
D558_RS14585 2993601 .. 2993628 +  -7.6  -5.65513   CGCCTGAACTACGCA        AACCGGGCATCT CGGT GGATGCCCGGCA         TTTTTTTGGTTCATC 100 50
D558_RS14590 NONE
D558_RS14595 2996107 .. 2996130 + -10.2   -2.6627   CCCAGGATTGCGTGG          GTGCGGCGCA GCAT TGCACCGCGC           ATTCTGATAAATTGC  62 87
D558_RS14600 2997355 .. 2997381 + -19.6  -4.25104   GGCGCATGTCGTATC         CAAAGGGCACCT GGT AGGTGCCCTTTG         TTTTACTGACGAGAC 100 58
D558_RS14605 NONE
D558_RS14610 NONE
D558_RS14615 NONE
D558_RS14620 NONE
D558_RS14625 3001980 .. 3002019 +   -13  -4.63218   AGTGCCAAGCACTGC  CGCAAAAGCCGCGTGAGTC TTC GACTT-CGCGGCTTTTTTG  TTTTCTTGGCAGCCA 100 55
D558_RS14650 3005662 .. 3005720 +  -8.7  -3.57908   CCGCTGGTGTTGGCG CGCTAGCTTGCTTGC-CGTGGGTGCC GACAACAA GGCTCCCGCTTGCGTGCAAGCAGGCG TTCTGGTCTTTGGTG  66 20
D558_RS14660 3008882 .. 3008901 +  -5.7  -4.56597   CGCCTGCGCGGTAGG            CGGCGAA TTCGGT TTCGCTG             TTTTTGCCGGCAGAG  76 379
D558_RS14670 NONE
D558_RS14675 3012304 .. 3012340 +   -21  -3.81428   GTTGATTCCGCTAGT   CCGGCCCGGA-TCTTCC TCAG GGAAGGCTCCGGGCCGG    TTTGCGTTGATTGCT 100 36
D558_RS14680 NONE
D558_RS14685 NONE
D558_RS14690 NONE
D558_RS14695 3015982 .. 3016002 + -15.4  -4.30995   GTGTTGGGCCGAACG            GGGCCGGC CACGT GCCGGCCC            TTGTTTTGTCAAGCG 100 44
D558_RS14710 3017797 .. 3017828 +  -2.8  -4.88407   CATAGGGCAAAATAC      GTATGCAGGCGGTT ACGG GACCGCCGTCAGGC       TTTTTCCTTCCATAC  76 36
D558_RS14715 3019051 .. 3019072 +   -13  -5.11112   TAGTCGTTGCCCTAG           GGGGCAGG TCTGAT CCTGCCCC            TTTTTGTTGAAATTT 100 58
D558_RS14720 3020080 .. 3020093 +  -3.1  -3.07113   CACGCCTTGAGGGCG               CG-GTC ATG GACTCG               TTACCTGAACTGATA  43 31
D558_RS14725 NONE
D558_RS14730 NONE
D558_RS14735 3022482 .. 3022493 +  -5.8  -3.85698   GACCAGATTGCCCAG                CACG ATGC CGTG                 TTTGTGGCCCAGGCC  62 292
D558_RS14755 NONE
D558_RS14760 3024995 .. 3025029 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 189
D558_RS14770 3026804 .. 3026826 +  -3.2  -4.61231   TCGCTCAGACGAGGT           CGAGCAAAGG CGG CCCCGGCTCG           TTTTTCACGGTCTGC  69 55
D558_RS14780 NONE
D558_RS14785 3028491 .. 3028539 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 116
D558_RS14790 NONE
D558_RS14795 3029485 .. 3029499 +  -4.2  -3.53012   TGGCCTCGGCGTGCT               CCGACA GTT TCTCGG               TTTCGGCCGCGAAAC  51 515
D558_RS14820 NONE
D558_RS14825 3037168 .. 3037210 +  -3.5  -4.40572   TCAGGGGCGCGGTCG CGTGCC-TGATAACG-CAC GGTCCAG GTGACGGTATCACGGCCCG TTTTGTCGGCCTTGT  66 79
D558_RS14835 NONE
D558_RS14840 3039100 .. 3039119 +  -2.1    -3.615   TCATAAGAAATTCAG            GTGGG CTACACTTCT CCCAC             TCTTTCTGTGAGGCT  47 276
D558_RS14845 NONE
D558_RS14850 3042693 .. 3042706 +  -6.7  -2.90075   GCGCCCGGTGCGAAA               TCGAC GTTC GTCGA                TGTCGTTGCCCGGGC  49 84
D558_RS14885 3051456 .. 3051483 + -14.8  -5.18371   CAACAGTGTCATACA        GCCCCCTGGCAT TCGA GTGCCTGGGGGC         TTTTCTTTTGTCCAC 100 72
D558_RS14890 3051971 .. 3051983 +  -6.2  -2.72344   GGCTGCAACCAGATT                GGCC AGCGC GGCC                TGCTTGGCCATCGCC  49 136
D558_RS14895 3052362 .. 3052376 +  -2.8  -3.30124   GGTCAGAAGTAGAAT               TTTCTC GTT GAGGAG               TTCTACCGCATGAAG  45 41
D558_RS14900 NONE
D558_RS14905 3053618 .. 3053632 +  -2.1   -4.1721   GTGTAGTAACTTACG               TATCG GACGG CGGTA               TTTTCCGATCTGAGT  59 170
D558_RS14910 3054733 .. 3054746 +  -3.8  -3.30124   GGTTGAAGTACTGCT               GCAG CCGGTC CTGC                TTATGGGCCGTGGCC  49 490
D558_RS14925 3057361 .. 3057392 + -16.1  -4.08064   CCATCAAATGCAAAA      CAAGGCACTACAT CGCTAA ATGTAGTGCCTTG       TTTTGACCGGGAATT 100 310
D558_RS14940 NONE
D558_RS14945 NONE
D558_RS14950 3061558 .. 3061588 +  -5.3  -3.02144   CTTGAGCGCGAAGTG      AGC-CAAGGCGGCG ATGC CGCTGCCCTGAGCC       TGTTGCAGCCAGTGA  49 41
D558_RS14955 3062237 .. 3062249 +  -3.3  -2.72344   CATCGGTTGCCGCAG                TGCTC GCA GTGCA                TCGTTCGCGCTGAAG  41 435
D558_RS14960 3063303 .. 3063331 +  -5.7  -2.73875   TAAGCATCCCTTCCT        GCACGGCGCCCTG CGC CTGGGCGCCACCC        TGCTGTTGACGGCCG  47 67
D558_RS14965 3066135 .. 3066149 +  -2.1  -4.14392   CGAAACGCTTGAGCA              GC-GGA GTGA TCCAGC               TTTTGGCAATTGCAC  58 500
D558_RS14975 3068427 .. 3068452 +  -6.8  -3.34236   CGGGTCCTGAAAACT         TGCCTGAGGC GGGCAA GCGTCAGGCG          TTGTGCAATAGGTTT  58 111
D558_RS14980 3069791 .. 3069801 +  -3.2  -3.61398   TATAGATCAAGCCCA                 GCAG GAT TTGC                 TTGTTCCAACGCCCA  51 396
D558_RS15005 3072990 .. 3073016 +  -9.3  -5.27335   AGTACGCGCACGCAA         AGCCTGCCCCG GACGA CGGCGCAGGCG         TTTTTATTTGAACGC 100 172
D558_RS15010 3073764 .. 3073805 +  -7.9  -4.18762   TGGCGAGCCGACGGG CAGCTCGAGTTTTCGCGGGC CAC GTCCGCGAAGTCT-GCGCCG TTTTCGATGGCGGTT  71 262
D558_RS15025 3076296 .. 3076308 +  -3.3  -4.84359   ATAGTGTGCGCCGTC                CTGTC CAC GCCAG                TTTTTGTCGGAATGC  73 97
D558_RS15030 3076767 .. 3076782 +  -4.6  -3.01001   GGATTGAACAGACTG              GCAGAC ATCG GCCTGC               TATGCTTTCGAGGTC  46 34
D558_RS15035 3077786 .. 3077796 +  -2.4    -4.067   TTCGCAGCCTAATTG                 CGTC ATC GTCG                 TTCTTCTTGATTTCA  56 77
D558_RS15040 3079945 .. 3079982 +  -9.7  -2.87132   GCCTCAGCCGGCGGG   ATAGCGCCTGGCAGGCT CTCG GGCCTGCCAGGCACGGG    TCTATCAGGCCGCGA  62 22
D558_RS15070 3084347 .. 3084399 + -11.2  -4.09685   GCCAGCGCGTCATTG GGCGG-GGCCCTGGGGTAGATGCCCA TCA TGGGCAAG-ACCCCGGCGCAACCGCC TTTTGGAAGCTGGGG  85 60
D558_RS15110 NONE
D558_RS15115 NONE
D558_RS15120 NONE
D558_RS15125 3100190 .. 3100200 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 71
D558_RS15130 3101353 .. 3101365 +  -5.5  -3.66803   CCAGTATGTGTTCGA                CCCAG CGT TTGGG                TTTGGGCTCTTCGAC  57 174
D558_RS15140 NONE
D558_RS15145 3103086 .. 3103110 + -18.6  -4.65895   CAGATTACCCAAAAA          GGGCGGGCAC ATTAC GTGCCCGCCC          TTTTTCAATCACGGC 100 66
D558_RS15165 3110102 .. 3110116 +  -5.6   -3.9712   CCTGTTCCCCGACAC               CGCCTG AAC CAGGCA               TTTGTAATCCGCTGA  64 19
D558_RS15175 3111885 .. 3111902 +    -2  -2.52464   GCGCCATCCCGGGGC             TG-TCGG CCAAC CCGATCA             TGAGTTGGCCGGCGG  37 301
D558_RS15190 3113905 .. 3113918 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 8
D558_RS15195 3115484 .. 3115497 +  -3.8  -3.18268   CGGCATCAAAGGCGC               TGGC ATTGAC GCCA                TACTTTTCCTTGAAC  47 319
D558_RS15220 3120371 .. 3120385 +  -2.7  -2.83164   TCAAAACGTTGTACT               CGCCG AACTC CTGCG               TGTACTCCTCCATGA  40 294
D558_RS15235 3123464 .. 3123484 + -13.9  -2.94199   ACCCACGGGCCGGCC            GCGCCCGGC CAG GCCGGGGGC            TATACTTGCTCGCTG  77 303
D558_RS15240 3124114 .. 3124133 +  -4.9  -2.71263   TTCAGTGATCGTGAT            TGCTGGC AGCAAA GCCGGCG             TCGTTCAGCACACTT  44 33
D558_RS15250 3126061 .. 3126094 +  -6.8  -3.16564   AACCTTCACCGTCGG    GGTGAACCGCAG-CAT CACG ATGACTGCGGG-CACC     TTCATGCGCTGGGCA  51 452
D558_RS15280 3131098 .. 3131112 +  -2.1  -2.50816   AGCCCCAGCGGCCGA              GG-TCC TGCA GGATCC               ATTCGTAGATGACCA  37 520
D558_RS15305 3135975 .. 3135985 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 43
D558_RS15310 NONE
D558_RS15315 3138781 .. 3138794 +  -2.3  -2.71731   GGCTCATACACGGCG               TCGCC GCGC GGCCA                TAGTTCGACGATCCA  38 171
D558_RS15345 3144179 .. 3144196 +  -5.5  -3.89587   GCCAGACATTGCAAG             CCCCTGA TCCG TCAGGGA              ATTTTTTCTTGGTCC  61 37
D558_RS15350 NONE
D558_RS15355 NONE
D558_RS15360 NONE
D558_RS15365 NONE
D558_RS15370 NONE
D558_RS15375 3151558 .. 3151576 + -13.8  -2.61264   TCATCATGGAAGGCC             GCTGCCCG CTC CGGGCGGC             CTTGTCCATGGAGCC  74 111
D558_RS15380 3152813 .. 3152830 +  -7.7  -4.20084   ACCAAGGTCCAGGCA             CGCTGAA CATC TTCGGCG              TTTTCCATACGTACT  74 20
D558_RS15385 3155214 .. 3155239 +  -4.7  -5.29846   AAATACCCAGGAAAC         CCCTGTAGA ACCGAGCG TCTGCGGGG          TTTTTCTTTCGGGTT  86 107
D558_RS15390 3156427 .. 3156451 +  -4.2  -3.27951   GCCGGCGTTAAATAT         CCGAGCGCGCT GTGA GGC-CGATCGG          TGTTGTACTCGACTC  47 397
D558_RS15415 NONE
D558_RS15420 3159243 .. 3159289 +  -5.3  -4.72986   CAGGAAGCAGGAAAA CGCTTTGCTTTGAT-GTCGGG CAGGTCC CCCGACGATGAAAGC-GGGCG TTTTTACTCGCGATA  79 54
D558_RS15425 NONE
D558_RS15430 3160802 .. 3160818 +  -7.9  -2.87132   GCAAGGGGTAGGGTC              GGCGTCC CTG GGACGCG              TCTATACGGAAAGAC  56 57
D558_RS15435 3162534 .. 3162550 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 525
D558_RS15445 3164414 .. 3164467 +  -4.3  -2.98719   CCGTGCGCTACTAAG GCCCCCTGCCGCGCTCTGGTCAGGCG AGC TGCCTGGCCAGAGCG-GGCTTAGCCA TCTCTCCTATAATCG  44 27
D558_RS15450 3165377 .. 3165391 +  -5.6  -3.08679   GTCGGCCAATACGGT               CTGACC GCG GGTCCG               TCTTGGGTCGGGCCG  49 22
D558_RS15475 NONE
D558_RS15480 3174526 .. 3174542 +  -4.4  -2.81133   CCCGCCCTTGGACAA              TTGTGC CCGCC GCGCAA              TGTCGTCCATGCGTG  43 502
D558_RS15490 NONE
D558_RS15495 NONE
D558_RS15500 NONE
D558_RS15505 NONE
D558_RS15510 NONE
D558_RS15515 NONE
D558_RS15520 3183235 .. 3183251 + -11.5  -5.60993   AGCTTGCCGGCAAAA              GCGGGCT TGC GGCCCGC              TTTTTTTGTCCGACA 100 46
D558_RS15525 3183838 .. 3183890 +   -23  -4.56597   ACTAAGCCTCGCAAG CGGCAAAAGCCCTCGCTGGCTGGAA GTCC TTCCAGTCAGCGAGGGCTTT-GTCA TTTTTCCGGCGCGAC 100 36
D558_RS15530 NONE
D558_RS15535 3186246 .. 3186267 + -11.5  -2.87211   GAGGAACCGATGATT           TCGCGGTCG AACT CGCCCGCGA            TCTCTACCAGCGCCT  64 136
D558_RS15555 3190061 .. 3190091 +  -3.3  -3.85698   CCAGCCTGCCCGCCG      CAGGGAC-CTGA CGACAGGC TCAGAGCCCCTG       TTTCTCCAAGCGGCG  55 15
D558_RS15565 NONE
D558_RS15570 NONE
D558_RS15575 NONE
D558_RS15580 NONE
D558_RS15585 NONE
D558_RS15590 3195440 .. 3195473 +  -8.1  -3.10344   ACCCTCGTACCCTGA     TCGCTGCAGGCGC GACTTACG GCGCCTGCAGGCA      TGTATTGCATGAAAG  57 26
D558_RS15595 3196594 .. 3196606 +  -6.9  -2.94454   GGCCTCGCGCATGAT                GCGCT CGA GGCGC                TGGTTGATTTCTTCC  50 299
D558_RS15660 3208721 .. 3208737 +  -5.7  -2.90496   ACGAAAAGCGCTTTG              CGGCCGC TTT GCGGATG              TACTTTCACCACCGG  47 301
D558_RS15670 3210186 .. 3210199 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 8
D558_RS15675 NONE
D558_RS15680 3211926 .. 3211964 +  -5.9  -3.35996   CCGCTGGCAAACGCC  CCG-GCCGAGGCCAGGGCG GCC TGCACGGGC-TTGGCGCGG  TTGTAGATCGAAATC  53 278
D558_RS15720 3217237 .. 3217247 +  -6.8  -3.54424   TGTATGCATGGTTCA                 TCCG AAC CGGA                 TTTGAGAAACTGGAA  60 60
D558_RS15725 3218230 .. 3218269 +  -9.4   -3.5361   CCTGGACGAATACAA  CCTATTGACAGTTCACAG CTAG CTGTGAAGATTCAATAGG   TTGTATGCATGGTTC  69 4
D558_RS15730 NONE
D558_RS15735 3220617 .. 3220651 +  -7.8  -2.58999   GCGTAAGCCCACTCA     CGCAAGGCCGACTG GATGAAG CGTTCGGCCTTGCC     ATTGGTCTGTGGGCG  50 191
D558_RS15755 3223830 .. 3223853 + -18.2  -4.77036   CCGGCCACAAAAAAA          GGCGGCAACC TCGC GGTTGCCGCC           TTTTTCATGGTGCAA 100 52
D558_RS15765 3227414 .. 3227451 +  -6.2  -3.53012   ACGGCGGTAAACGTC  GC-CCTGC-GGCACCGCA CCGA TGCGGCGCCAGCGTGAGC   TTTCCGGCAAGCGGC  55 204
D558_RS15855 NONE
D558_RS15860 NONE
D558_RS15865 NONE
D558_RS15870 3248990 .. 3249008 +  -5.3  -5.00616   GACCCCCCTCAAAAA            GG-CGGAT GCCG ATCCGACC             TTTTTTGGGGGCCCG  83 77
D558_RS15895 NONE
D558_RS15900 NONE
D558_RS15905 NONE
D558_RS15910 3257275 .. 3257307 +  -9.7  -3.06796   GGCGGTGCAGGCCGA      CCGCAGAATGCTGGC ATA GGCGGCTTGCTGCGG      TTCGATGCGATAGAC  60 64
D558_RS15920 3258498 .. 3258520 +  -3.3  -4.25104   GTGGAGACGACGGCC           TGATGCGAC GCCAG GCCGCACCA           TTTTGGTGCGAACAG  60 23
D558_RS15925 NONE
D558_RS15930 3260430 .. 3260455 +  -3.9  -4.33956   GTAGACCCTTCCCCC         GCTGGCGCCTCG GCC TGAG-CGCCGCC         TTTCTCTCTTTTGCC  65 8
D558_RS15935 NONE
D558_RS15940 NONE
D558_RS15945 NONE
D558_RS15950 3262991 .. 3263006 +  -2.6  -4.18018   GCGCATTACGGCGCG              CAT-CTG TTC CAGCATG              TTTTCGATACCGGAG  58 325
D558_RS15960 NONE
        fliG NONE
D558_RS15970 NONE
D558_RS15975 NONE
D558_RS15980 NONE
D558_RS15985 NONE
D558_RS15990 3270413 .. 3270443 +  -3.3  -2.59135   CGTGCTGTTTACCGC      CTTCGTGGTGCAAT AAGC ATGGC-CTACGAGG       CATTTCTTTCTCAGG  40 10
        fliM NONE
D558_RS16000 NONE
D558_RS16005 3272251 .. 3272266 +    -6  -3.14136   CGCTCAAGCTCGGCC              AGGCGC TAAC GCGCCG               TTAAATCATTCATGA  52 6
        fliP NONE
D558_RS16015 NONE
D558_RS16020 3274463 .. 3274480 + -11.3  -2.57211   TGGTATCGCCCGCCT             GTTCGGC CTGC GCCGAAC              CTTCTGCCACACGGT  62 363
        fliA 3280609 .. 3280627 + -12.4  -2.72043   GCATCCCCCTGATGA             TGGGCGGC CCC GCTGCCCA             GTTTGAAGAAGCCTT  70 188
D558_RS18230 3281434 .. 3281445 +  -3.6  -2.78679   TCGCCACGGGCGATA                CTGC TGCT GCGG                 ATTTCGCTGCCGAGA  43 195
D558_RS16085 3287428 .. 3287442 +  -3.5  -3.55889   AACAAAGCGTCGCCC               GCATG ATGGC CGTGC               TTGTCGTTGATCTGT  51 416
D558_RS16105 3290792 .. 3290816 + -10.6  -3.29043   CGCGCGGCCAGTGCT          GCGGGCGGCC TGTGT GGCTGCCGGC          TTGTACCGGGGGCTT  68 128
D558_RS16110 3293364 .. 3293377 +  -9.5   -6.5058   CCACGCCCCAAAAAG               CGGCC TTCG GGCCG                TTTTTTTTTATTTAT 100 48
D558_RS16115 NONE
D558_RS16120 3295622 .. 3295657 + -11.8   -5.0133   GGGGCTAGCAAGAGG    GGGTCTTGGCGCTTCG GATG CGGGACGCCAAGACCG     TTTTTTCAGAGCATC 100 33
D558_RS16150 3300371 .. 3300387 +  -5.7  -2.69528   GTAAAAGGCTAGAAC              ATCGGCC TTT GGCCGGG              TAGGTTTCCGTTTGC  46 216
D558_RS16155 3301382 .. 3301404 +    -9  -3.18264   CTCAAATAGGCGCGC           CTGGCCGCCG TAT CTGCGGCGAG           TTCGTCCATCCCGCC  63 49
D558_RS16190 3309523 .. 3309544 +  -7.2  -2.82623   TCGCAGCACGCAACC           CGCCAAGG TGGCGT CCTCGGCG            TAGTTCTGCCCGAGC  49 180
D558_RS16200 3312939 .. 3312951 + -10.5  -3.44517   CGGTTTATCCCTGCA                CGCCG TTA CGGCG                TCTTATTCGATCTTC  69 86
D558_RS16205 NONE
D558_RS16210 3317615 .. 3317631 +  -4.4  -4.59773   ACACGAGTACCCCAC             CGG-CTG ACGC CAGGCCG              TTTTTCCACCTGAAG  72 40
D558_RS16215 NONE
D558_RS16220 3321712 .. 3321728 +  -9.4  -3.90358   TGCTGGTCTGCTTGC              CGCCCA CCTCC TGGGCG              TTTCCTATCTCCTGT  75 251
D558_RS16225 NONE
D558_RS16230 NONE
D558_RS16235 3323368 .. 3323396 + -18.9  -3.08438   ATCGCGTAACCCACA        GCGCGCACCCTGA CTT TCAAGGTGCGCGC        TGTTGCAGTCTGGTG 100 55
D558_RS16240 3325164 .. 3325187 + -14.6  -5.00616   GGTGGGTTTACGACG          GGGCGGA-CGC GAT GCGATCCGCCC          TTTTTTGGCGGGAGG 100 61
D558_RS16245 3325603 .. 3325626 +  -6.6  -4.18197   GGCCCCCGGGGGCTG          CCGCCGTGCG CACG CGCATAGTGG           TTTTCCCTGAAGCCT  69 43
D558_RS16250 3326441 .. 3326466 +  -3.2  -3.13925   CGGTAGCGGGCCCAT         CCGATGACGA CTTAAA TCGTCTTCCG          CTTCTTTCTTACTGC  43 19
D558_RS16255 NONE
D558_RS16260 NONE
D558_RS16265 NONE
D558_RS16270 NONE
D558_RS16275 NONE
D558_RS16280 3333187 .. 3333211 + -12.2  -3.13164   CTGAACCTCTCTGTG         CTTCGGCGCCG TACG CGGCGCC-AAG          TTCGCTACTTGCACC  73 37
D558_RS16285 3334766 .. 3334785 + -12.1  -3.69354   CTTGACTGCTGACCT            GCGCGGG TAAAAT CCCGCGC             TTTCCCATTCTGGAG  81 56
D558_RS16290 3335380 .. 3335394 +  -3.5  -3.20573   GCCTGCCCAACCGGG              GCC-GG TCAT CCAGGC               TATTCATGTCGATCA  45 79
D558_RS16295 NONE
D558_RS16300 3337676 .. 3337688 +  -6.9  -5.02074   ATAAAGCGCAACAGG                CGCGG ATC CTGCG                TTTTTTCCGGGGTGG  91 100
D558_RS16320 3341497 .. 3341517 +  -5.3  -2.71011   GAGTAATTGATGCCG            TGAGTGGCC AGC GGCCATCCG            TAATTGGCGCCGCGT  44 382
D558_RS16330 3343280 .. 3343293 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 299
D558_RS16335 3344627 .. 3344643 +  -2.1  -3.64773   GATGCTGCGCATCGC              ACGCTGA CTA TCCGCGC              ATTTTTGTATTGGAC  51 87
D558_RS16340 3345651 .. 3345689 + -15.2  -3.05715   CCTGAACCCTCGTTT   GAAGCCCGAGGCGGGGTG CAA CGCCACACCTCGGGGTTC   TTGCATGAGCAGGTT  85 36
D558_RS16380 3353877 .. 3353892 +  -6.8  -4.60255   CCCCGGTGCCCGCCC              GGG-GCG TGG CGCTCCC              TTTTTCCGCAGTTGT  79 92
D558_RS16385 NONE
D558_RS16390 NONE
        ugpC 3357023 .. 3357036 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 62
D558_RS16400 3358321 .. 3358346 + -16.9  -5.44119   ATGAACCATAAAAAA         GGCTGCCTGCA ACTA TGCGGGCAGCC          TTTTTTTGGCCTGGC 100 37
D558_RS16410 3360627 .. 3360647 +  -3.2  -4.77036   ATCACCAGCACGCGC           GCGCCCTGC ACGT GCAAG-CGC            TTTTTCGTCATGCAC  75 362
D558_RS16455 3370083 .. 3370111 +  -7.4  -3.14344   CCCGGTCTGCCGGAA       C-GCTCGCCG-GGC CAG GCGACGGCGAGCAG       TTGATGACGCGGCTG  54 79
D558_RS16460 3372140 .. 3372154 +  -3.5  -3.09516   CTTGCCGCACCGGGT               CGGCT TGCAC AGTCG               TTACCTAATCACACC  43 89
D558_RS16465 3374628 .. 3374639 +  -7.2  -4.07687   CGGCCTTCTCGAACG                CCGC ACGG GCGG                 TTTTGGCCACGGCCT  68 235
D558_RS16490 3380077 .. 3380090 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 47
D558_RS16495 3381577 .. 3381607 +  -4.6  -4.08216   TTCCGGATTGAGCGG       CGGCAGGCCGAT GTCTTCG AACAGCTTGCCG       TTTTCGACCAGCTCG  64 239
D558_RS16505 3383614 .. 3383629 + -11.8  -4.64423   CGGTAGTCTAGACAG              GCGGCC CCAA GGCCGC               TTTGTGTTTTTCTTG 100 93
D558_RS16510 NONE
D558_RS16515 3386567 .. 3386591 +  -3.3  -2.79796   GGCTGCGCCTGGCGG          CCGTAATGGGC GAA GCCCGGGTCGG          TCTCCTCGCATGCCC  41 502
D558_RS16530 3388982 .. 3388998 + -13.7  -3.63515   GCCGGCGCAAAAAAA              GCCGCTC AAT GAGCGGC              TTGTTGGGGATGGGC  83 112
D558_RS16560 3397201 .. 3397234 +  -7.2   -4.3014   AGTTTCCAGCTCCAT     GGCCGCCGCCGCCG TCTGTT CGGCCATGGCGGCA      TTTTCCTGAGTGTCT  74 116
D558_RS16570 3400428 .. 3400447 +  -2.1  -3.05844   AGTCAAACCCCAACG            TGTCG-GC AAACG GCACGGCA            TCTTCAACTGCCAGC  42 388
D558_RS16580 3402259 .. 3402274 +  -2.4   -2.8294   TGTCGCCGAGCATGT              GCTGGG CCTG CCTCGC               TCCTTCTGAACACTA  39 1
D558_RS16585 3404019 .. 3404031 +  -3.3  -4.46854   GCATAAAACTCATGC                ACCAG AGT CTGGA                TTTCTTCTTCCGTGC  69 397
D558_RS16600 3406006 .. 3406033 +   -12  -2.60496   TGCTCCGCGCCGTCT        G-ACAGGCAGGCG CTA CGCCTGCCCGTGC        CTGTTTACCAACCCC  69 76
D558_RS16615 3409788 .. 3409816 +  -8.1  -2.75844   CGCCAATTAACGCGC       GACA-GGGGCGG CCTGGC CCGCCCCCTGCC        CTTTAGCCTCGACCC  54 31
D558_RS16625 NONE
D558_RS16630 3411660 .. 3411670 +  -3.2  -4.08767   GCGGCCGGGGAGGCG                 GCTA GCA TGGC                 TTTTCCCGGACTGAA  58 43
D558_RS16635 3413968 .. 3413994 + -22.4  -3.48924   TCAAGGGATAAGCCA         CTATGGCCCGGC ACC GCCGGGCCATAG         TTCTCTGGGCGCTGC 100 30
D558_RS16655 3417748 .. 3417768 +  -6.2  -3.88583   CACAGGCAGCGATAC            GGTGTTTG ACCAA TAAACACC            TTTGTCGCCACTTTG  62 262
D558_RS16695 3435821 .. 3435831 +  -2.4  -3.21099   ACGAAGGCGCGCGCC                 AGCG ATA CGCG                 TTGCTGCTCGCCACC  44 233
D558_RS16705 3436924 .. 3436952 +   -11  -2.52516   AAACCCTTGCTGCGC        GGCGATCAGCCT TCGGC GGGCTGATCTCC        CTTGATGATGGGCGC  65 2
D558_RS16715 NONE
D558_RS16720 3441177 .. 3441217 +  -5.2  -4.07885   CCACTGCCAGCGCGG  CGCGGCGCAGAGATTGCG TCACC TGCGGATAGTGCGCCGCG  TTTTCACCGGCGATA  64 413
D558_RS16740 NONE
D558_RS16745 3446207 .. 3446226 + -16.4  -3.05463   TCGAAAAACTAAGCC            GCGGCCGC CTCG GCGGCCGC             TTGGCTCGCCAGCCT  88 29
D558_RS16755 NONE
D558_RS16760 3449126 .. 3449136 +  -6.8  -3.37245   CCACATAATGGCCCA                 TGGC ATC GCCA                 TTCATGTTGACCTGG  55 233
D558_RS16795 3455169 .. 3455221 +  -4.7  -2.78384   GACGTGGATGTCCAC GCG-CGCCTGTGGGCAG-GCGGCCA GCATA TGACCGCGCAGATCACGCGCGGCGC TCTCATCAAGGGCCA  44 496
D558_RS16820 3459016 .. 3459053 +  -4.6  -4.18018   CTGCCTGAGTGGCTG   CGGCAAGGTCGGCGCG GGACTG CTCGTCGAGCGCGCCG    TTTTGCGTGGCGGCC  64 344
D558_RS16830 NONE
D558_RS16835 3462322 .. 3462346 +   -15  -3.06183   GCCTGAGGTCAACTG         GC-CGGGCCGC GTTG GCGGCCCGCGC          TTGAATCGCGATCGC  85 35
D558_RS16840 3462872 .. 3462891 +  -6.4  -3.12351   TGCCCGCGCGTGATG            TTGGCTGCG ACG CGC-GCCAG            TTCGCTCTGCACGGC  51 93
D558_RS16930 3479397 .. 3479447 +  -3.3  -2.79183   TAAAGAGCAGGATCT GGTGACGCGTAGCGGCATCAAAC AACGCGC GTTTGAC-CCGCT-CGCGCCGGC TGTCATCGGAGTGCA  41 98
D558_RS16940 3482239 .. 3482257 +  -5.9  -4.24384   GCCTGCGCTTCAAGT             GCCAGCC AAGGC GCCTGGC             TTTCGTTTTGCTCGT  70 475
D558_RS16960 3486062 .. 3486081 +  -2.7  -2.53876   ACTTGCCGGTGGACC            GCTGAGC CATACC GCGCGGC             TGGCTTCGAGTACCA  38 21
D558_RS16965 3486765 .. 3486784 +  -4.2   -3.0558   CAGCCACGCCGGCGC            CGCC-CACG GAC CGTGCGGCC            TGATTTATGCTGTAG  45 3
D558_RS16970 3488116 .. 3488129 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 128
D558_RS16975 NONE
D558_RS16980 3490440 .. 3490452 +  -4.7  -3.87994   GATTGACGGCCGATT                CGTCG AGC CGCCG                TTTATCAGGCTGACT  59 35
D558_RS16985 NONE
D558_RS16990 3493336 .. 3493363 +  -6.8  -4.30416   TGTGCAAACGGTTGC        GGTCCTGCGCTG TAGT CGGCGCCGAGCC         TTTTGAGTTCATCCT  72 149
D558_RS17005 NONE
D558_RS17010 NONE
D558_RS17015 NONE
D558_RS17020 NONE
D558_RS17025 3500295 .. 3500305 +  -6.8  -3.36569   TCCGCCTTCGTACGC                 CGTC ATG GACG                 TCTTTGAGCAATTGC  58 52
D558_RS17030 3500757 .. 3500778 +  -5.1  -2.71322   CATCGCGCAGCCCGA           ACTG-GCACC CTT GGTGCGCAGC           TGATATGTGCCTTGC  44 1
D558_RS17035 NONE
D558_RS17040 3502249 .. 3502291 + -13.5  -3.28712   CAAACGCACCACCAC CCAGGC-CCCCATGAGCA CGACAAGC TGCTCGCGGGGAGCCTGG TTATACAGCGCAAAC  74 158
D558_RS17050 3503069 .. 3503088 +   -10   -2.8655   CTGCAGAGTGGCCTG            GCAGCCGGT CTG ACCGGC-GC            TCTGGTCTGCCTGGG  64 50
D558_RS17055 3503698 .. 3503710 +  -9.1  -3.39018   GCGACGGTCCGCCAG                GGCCA GGA TGGCC                TCTTTGACCTCATCA  64 265
D558_RS17065 3504689 .. 3504711 +  -7.6  -3.64703   CCATGATTGTCCGAT           TCACGTGCGG GAG CCGCCCTTGA           TTTCCGTCACCCGCA  66 35
D558_RS17070 3505159 .. 3505177 +  -2.3  -3.63744   ACGGTAACTAAGCGC            CGCC-CGC TCGC GCGAGGCC             TCTTTTCCGGCGAGG  51 30
D558_RS17075 3506640 .. 3506653 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 73
D558_RS17080 3508204 .. 3508235 +  -3.5  -3.35046   TGTGTTCGCTGATAC      GGATCAGGTCGGC AATGGA GCCGGCCAACTCC       TGTTTCAGGGCATCG  47 519
D558_RS17090 NONE
D558_RS17095 NONE
D558_RS17100 NONE
D558_RS17125 3519193 .. 3519207 +  -8.6  -2.71924   ATAATCGGGCGGCCC               TTTCGG GCC CCGAAA               ATTTCCACGCCCATG  58 207
D558_RS17130 NONE
D558_RS17135 NONE
D558_RS17140 3521761 .. 3521813 +  -6.8  -4.07568   TGAACGCTTACCCGG CCTCGACACGCAGGTCCTGCAGGCG CGCG CGCTGGC-GGCCTTGGGCGTCGAAG TTTTCCGGCGCGAGC  68 38
D558_RS17150 NONE
D558_RS17160 3526023 .. 3526039 +  -2.2  -3.87815   CGATATCGGGCAGGC             G-CCGGG CAGA TCCGGAC              TTTGTCCGGCTGCCC  55 245
D558_RS17170 3527979 .. 3528024 +   -17   -2.6891   ACCTCGCCCGCGCCG TGCGCCAACGTCGCACGCGCTG ACGA CAGC-CGTGCC-CGTTGGCGCG TACTCTACTATCATG  85 3
D558_RS17175 3528489 .. 3528502 +  -2.4   -5.4833   TCGGCCAGCGCCACC               GTCA GGTGCA TGAC                TTTTTTCTTCAGTGC  89 69
D558_RS17195 3532187 .. 3532229 + -11.9  -3.64866   CACACACACCGCGAC GCCAGATGGTAGCGCCGCGG CGCG CC-CGGCGCCAGCGCCTGGC TTTGCAGTATGCTCT  81 522
D558_RS17205 3533529 .. 3533541 +  -3.3  -3.06009   CGCAGAACCGCCTTC                GCGGA CAG TCCGG                TCTTCAGGAGTTTTG  43 104
D558_RS17210 3534523 .. 3534547 +  -3.5  -3.06796   AATGGCCGAGGTCAG         CGGCAGCCCT ACACCG AGGTC-GCCG          TTCGATAGGCTCACG  43 366
D558_RS17225 NONE
D558_RS17230 3537415 .. 3537437 +  -4.1  -3.14931   CCCTCATGCTGGAAG           TCATGGTGA CCTGC TCCCCGTGA           TTAGTACGAAATCGA  45 3
D558_RS17235 3538099 .. 3538147 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS17240 NONE
D558_RS17245 NONE
D558_RS17250 3538864 .. 3538888 +  -2.8  -4.20783   AATGCGAGCCGAAAT          CGCGGTAT TCCGGTAAT AAACCGCG          TTTATTGGCTGGCGT  64 90
D558_RS17260 3541208 .. 3541221 +  -9.5  -3.01712   CCGTCATATCCGTGC               CGGCC TGCC GGCCG                TCTTGCGCAAAGCGC  59 232
D558_RS17290 3547507 .. 3547521 +  -2.8  -3.34895   GTGGCCAAAAGCCCT               GTCC GCGGCAA GGAC               TTACTTCGCCCTGGC  47 49
D558_RS17295 3548301 .. 3548350 + -12.8  -3.59262   CTGCGCGCGAGCCCC CG-GCTCGCGCGCGCCGCGCTGAC CCAG GCCAGCGCGGTTCA-GCGAGCACG TTTGCGCATATCGGC  81 53
D558_RS17305 3550048 .. 3550089 +  -8.6  -3.40403   GCGCGACGGAACAGG CCGCGGAAATCCGCCTCG GTCGTG TGGCGCGGATTCCAGCGG  TTGTAATCCGCCGCA  64 51
D558_RS17350 3559396 .. 3559409 +  -8.1  -2.76492   GAAAATGGCGAGAAA               CCTGC GGCG GCAGG                GTTTAGAGTGGATGA  54 64
D558_RS17355 3560400 .. 3560416 +  -5.1  -3.78034   CCCGGTGGCCAGGGC              GCTGG ATACGTC CCAGC              TTCTTGATGTCGATG  58 514
D558_RS17365 NONE
D558_RS17370 3562959 .. 3562984 +  -6.8  -3.33162   GCTGCAAGGCCTGCG         CGGCCTG-AGC ACGCA GCTGCTGGCCG         TTGTCGGCTGCCATC  55 490
D558_RS17380 3564645 .. 3564655 +  -2.4   -3.2396   AGCGTTGGCTGCCCC                 GCTC GAC GCGC                 TTCCTAGTAGTCATT  44 123
D558_RS17385 NONE
D558_RS17390 NONE
D558_RS17395 3567440 .. 3567456 +  -9.5  -3.05384   GCTCGAGCTGACGCA              GATGTTG GGT CAACATC              TTGGCTGAGAGCCCC  60 242
D558_RS17405 3568494 .. 3568509 +  -4.6  -2.90075   CTGCGTCTCGATGGC              GGCATG TGGC CAGGCC               TCTGATTACGCCCAC  46 5
D558_RS17410 NONE
D558_RS17415 3570095 .. 3570112 +  -5.5  -4.19177   GAAATCGTGAGCCAT             CGCGATC ACCC GATCGCC              TTTGTATTACCCGCT  66 294
D558_RS17455 3578810 .. 3578825 + -10.4  -5.75342   CAGAGAGCACGACGA              CACGCC GCAA GGCGTG               TTTTTTTTGGCAGCA 100 46
D558_RS17460 NONE
D558_RS17465 3580375 .. 3580400 + -14.1  -4.00526   GGCGCAGGCCCTCGA         TACCCGGGTTA TTAC TAGCCCGGGTA          TTTGCTTATGCCCTT 100 52
D558_RS17470 NONE
D558_RS17475 NONE
D558_RS17480 NONE
D558_RS17485 NONE
D558_RS17490 3584675 .. 3584723 +  -4.3    -3.727   CGAATCAGAGTTGGT CAATGGACTTTGTGGCCGACGGC CTA GCCTATGGCCGCCGATTCCGCTG TTTGACTATCGTCGA  54 383
D558_RS17495 3585073 .. 3585097 +  -4.1  -2.60496   GAGTCGAGTACAACA          CCGATCGGCCT CAC AGCGCGCTCGG          ATATTTAACGCCGGC  42 179
D558_RS17500 NONE
D558_RS17505 NONE
D558_RS17510 NONE
D558_RS17515 NONE
D558_RS17520 NONE
D558_RS17525 NONE
D558_RS17530 3592029 .. 3592042 +  -2.3  -2.83449   CACTGCGGGTTTGGT               GGCCA CGCC TGCCC                TCGTTGTACCGATGT  39 88
D558_RS17535 3592929 .. 3592943 +  -5.6  -3.64703   GCGCCGCCATGCCGC               TGACGG CGG CCGCCA               TTTCCCTGACCGCGC  58 67
D558_RS17540 3593414 .. 3593426 +  -7.7   -3.8512   GTGACCCAGAGCGCG                CATCG TTT CGATG                TTCTTCTCATAAATC  67 101
D558_RS17560 3600472 .. 3600496 +  -4.2  -3.27951   GCCGGCGTTAAATAT         CCGAGCGCGCT GTGA GGC-CGATCGG          TGTTGTACTCGACTC  47 121
D558_RS17575 NONE
D558_RS17580 3604166 .. 3604192 + -20.9  -4.65263   ATCCCTTCCAAACCA         CGGGCGCTGGC CACAA GCCAGCGCCCG         TTTCTTTTGGGCAAT 100 99
D558_RS17630 NONE
D558_RS17635 NONE
D558_RS17640 NONE
D558_RS17645 NONE
D558_RS17650 3619164 .. 3619213 +   -23  -2.71483   GGTGGTTACGGCTTG CTGG-CGGCTTTGCGGCCTGCCCG GCTG CGGGTAGGCCGCGA-GCCGACCGG TAATTCACCCGATAT 100 454
D558_RS17665 3620322 .. 3620333 +  -4.4  -2.78679   TATGCATTCGCCAGC                GATG ACGC CATC                 ATTTCCGTAGGAGAC  44 42
D558_RS17670 NONE
D558_RS17675 NONE
D558_RS17680 NONE
D558_RS17685 NONE
D558_RS17690 3625609 .. 3625629 +  -4.7  -2.91065   CTGGGACGAGTACCT           CGGCC-TC CCGGAC GACGGCCG            TATCCTGTGTGTGAT  46 415
D558_RS17700 NONE
D558_RS17705 3628266 .. 3628302 +   -10  -2.59431   GGCAGCCCATCATTT   G-CCCCGGCAGGCCGCC GCAA GACGGCCTGCCGTCGAC    TCAGTTGTGCGGCGG  62 85
D558_RS17730 NONE
D558_RS17735 NONE
D558_RS17740 3643262 .. 3643292 + -10.2  -3.40403   ACTCAGCAAATGGCA       GCCAGGCGCGGTAG CAC CCGCCGCGCCGTGC       TTGTCGTGCGGCGGG  69 85
D558_RS17760 NONE
D558_RS17765 NONE
D558_RS17770 NONE
D558_RS17775 NONE
D558_RS17780 3652269 .. 3652314 +  -6.1  -2.70259   CGAAGACTGAGGCCA CGCCACGATGCTTGCCA AGATCCTTTTGC TGGCTGGCCTCGTGGTG CTTGTCCTGTATATC  48 31
D558_RS17785 3652933 .. 3652951 +  -5.3  -2.86164   AGCACGTCGAAGTAC            TGGTCGGC AAAG GCC-ACCA             TCTCGTCCTTGAGCG  45 395
D558_RS17795 NONE
D558_RS17800 3655252 .. 3655273 +  -5.1  -3.55761   ACGGCCGCACGTGCT           GCCGTCGTGG AAC CCGC-ATGGC           TTTGCCCGCTGCCTG  53 196
D558_RS17805 3656665 .. 3656689 +  -4.2  -3.27951   GCCGGCGTTAAATAT         CCGAGCGCGCT GTGA GGC-CGATCGG          TGTTGTACTCGACTC  47 75
D558_RS17830 3660118 .. 3660133 + -10.4  -3.87815   TCCACAAAGCACAAA              TCCCGC AATA GCGGGA               TTTGTGCGCGTCCGA  77 44
D558_RS17885 3669982 .. 3670014 + -17.8  -3.66921   CGATTAGAGCCCGAA      GGCCTGAGTTCGGT ATTGC ACCGGGCTCAGGCC      TTTCAGCTTGAGCTT 100 109
D558_RS17900 3672349 .. 3672380 +  -6.5  -4.84359   GCCGCAACTGATTGT      CGGATGCAGGCGTC TTGAC GGCGCCTGCC-CTG      TTTTTATCAACCTGG  82 30
D558_RS17905 NONE
D558_RS17910 3672965 .. 3672997 +   -20  -3.36273   ATCGCTGTCTGTAGC     GCCTCCCGCCATCGG TACG CCGATGGCGG-AGGC      TTCCTATTGAAACCA 100 40
D558_RS17915 3673417 .. 3673463 + -12.3  -3.53444   GATAAGCCGTATTGA CCGGGGATGGCCGCCATCGC CTGGACGA GCCATGGCG-CCGTCCCCAG TTTGGAAAAACATCA  77 36
D558_RS17920 NONE
D558_RS17925 3675506 .. 3675528 +  -3.2   -5.1244   GGCGCTGAACCGCCT           CGCATCCGCC CTG GGCCGAGGCA           TTTTTCTATTAATCA  78 225
D558_RS17930 NONE
D558_RS18245 NONE
D558_RS17935 3677998 .. 3678026 +    -3  -2.74012   ATCGACCGCAAACCA       GGGGCCAGCCATG ACCG CGTAGC-GTCCCC        TGCTTGCGGTAGTCG  41 108
D558_RS17940 3678867 .. 3678880 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 75
D558_RS17945 3680165 .. 3680190 + -20.5  -5.41143   ATGAACCAAAAAAAA         CCCCCGCCATC TTGA GATGGCGGGGG          TTTTTTTGGCGGATC 100 37
D558_RS17970 3686966 .. 3686979 +  -2.3  -3.37612   GTTCATCGCGGAATA               GCGTG GAGC CGTGC                TTGATTGCCGTTACG  46 56
D558_RS17975 NONE
D558_RS17980 3687936 .. 3687967 +   -10  -3.05384   TCTGACCCACCTGGG      CGATGATGGCGGCC TTTT GGCCGCCGACAATG       TTGACTCAGGAGCAA  66 282
D558_RS17985 NONE
D558_RS17990 3689784 .. 3689797 +  -2.3  -2.74605   TTTACTCCGACGATT               CCGAC GAAA GTGGG                TCAATTTTCAACCGG  39 67
D558_RS17995 NONE
D558_RS18025 NONE
D558_RS18030 3693260 .. 3693278 +  -3.7  -2.62616   AGACGCCAATATCGC             CGCTGCG AGCCC CGCGGCA             TACTGTGGGCCATGA  42 58
D558_RS18035 3695009 .. 3695024 +  -3.2  -4.49556   CTGGCGGCTGTAGGT              ACCTGA TTGC TCAGGA               TTTCTTTGGTAGCCC  66 173
D558_RS18045 3696018 .. 3696047 + -17.9    -4.371   GATCCGATCCTGGAG       ACAAAGCGCCGGC CCAA GCCGGCGCTTTGC        TTTTACTGTCGTGCC 100 77
D558_RS18050 3696023 .. 3696042 - -16.4   -4.0371   GATCCTGGAGACAAA            GCGCCGGC CCAA GCCGGCGC             TTTGCTTTTACTGTC 100 142
D558_RS18040 3694982 .. 3695003 - -15.9  -4.06055   ACGCCGGAAACGAAA           CAGCCGCCA TTGC TGGCGGCTG            TAGGTACCTGATTGC 100 53
D558_RS18020 3692222 .. 3692240 -  -5.8  -3.57144   TCGGGCATGCCGAAA             CTCCGCGC ACT GCGAGGCG             CGCATTATAGGCGGC  55 54
D558_RS18015 NONE
D558_RS18010 3691278 .. 3691303 -  -5.3  -3.13867   GTATTTACTAAGATA         GTGGGTGCGGA TGCA CCCGGAGCCAC          GATGCAATCAAGGAG  49 297
D558_RS18005 3691014 .. 3691027 -  -9.5  -5.49234   ACAGGCAACAAAAAA               GCCCC TTGC GGGGC                TCGGCTTTGGCCTAG 100 54
D558_RS18000 3690381 .. 3690405 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 75
D558_RS17965 NONE
D558_RS17960 3684124 .. 3684149 - -15.5  -2.78384   GTCTCTGGTAGGAGA         TGCACTCCCCG TTGC CGGGGAATGCA          TGTAACGCTTATCGG  83 78
D558_RS17955 3682764 .. 3682778 -  -9.2  -5.52909   CAAGATGCAAAAAAA               CCCGCC AAT GACGGG               TTTTTTGCAGAGCAT 100 46
D558_RS17950 3680165 .. 3680190 - -20.5  -5.96521   ATGAACCAAAAAAAA         CCCCCGCCATC TTGA GATGGCGGGGG          TTTTTTTGGCGGATC 100 39
D558_RS17895 3670306 .. 3670320 -  -2.1  -2.66316   TGCGGCATTACACGA              TGCTCG ATGC CG-GCA               TAGGCTTGCCGTCTG  38 146
D558_RS17890 3669500 .. 3669517 -  -3.3  -4.15044   GTGGCTGGCAACAAA             GACGAAG CGAC CCGCGTC              CTGAGCCAACTCAAG  60 478
D558_RS17880 3666591 .. 3666616 -  -7.7  -2.71483   ATACCGCCGCAACCA         GCTATTGCT TTCCATCG AGCAATAGC          CGATTTTTGAGCGCC  54 1
D558_RS17875 3665806 .. 3665821 - -11.8  -5.08824   CTCGGATTGAAAAAA              CCGCGC CGTG GCGCGG               TTTGTGGCAAGGCCG 100 90
D558_RS17870 NONE
D558_RS17865 NONE
D558_RS17860 NONE
        iscA NONE
        hscB NONE
D558_RS17845 NONE
D558_RS17840 NONE
D558_RS17835 3660111 .. 3660140 - -20.9  -3.87869   GTAAGGGTCCACAAA       GCACAAATCCCGC AATA GCGGGATTTGTGC        GCGTCCGAGGCTGTT 100 40
D558_RS17825 3659336 .. 3659367 -   -10  -3.05384   TTGCTCCTGAGTCAA      CATTGTCGGCGGCC AAAA GGCCGCCATCATCG       CCCAGGTGGGTCAGA  66 66
D558_RS17820 NONE
D558_RS17815 3657039 .. 3657087 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 499
D558_RS17810 3656419 .. 3656432 -  -2.3   -4.3898   ATCACGCGTATAAAA               CCCAG AACA CTTGG                TTCGCCGACCTCACC  65 436
D558_RS17790 3652146 .. 3652158 -  -6.9  -3.01712   CCGGGCCCTGGAATA                CGGCA TGC CGCCG                ACAGGTGGGTGCGGC  50 451
D558_RS17755 NONE
D558_RS17750 NONE
D558_RS17745 3643203 .. 3643250 -  -6.1  -3.06796   CGCTATCGCATGTAA GAGGTTCCCCACGGGTGCCGCA CGTAT CACGGCACCCG-GGGTCGACTC AGCAAATGGCAGCCA  52 24
D558_RS17725 NONE
D558_RS17720 3637936 .. 3637954 -  -9.5  -5.06414   GCTGGCGAACAAAAA             GCGACGG ATTTG CCGCCGC             GTGGCCACGGATATG 100 201
D558_RS17715 3633018 .. 3633030 -  -7.7  -4.73388   AACTTGCAGGAAAAA                TCCGA ACG TCGGA                GGCGCGCGTTTTCTG  87 153
D558_RS17710 3628249 .. 3628298 -  -4.2    -3.767   GACCTAGCCATCAAA CCGGCAGCCCATCATTTGCCCCGG CAGG CCGCCGCAA--GACGGCCTGCCGT CGACTCAGTTGTGCG  54 30
D558_RS17695 3625862 .. 3625882 -  -5.4  -4.11692   GATGTACCCCCAAAA            CTGCGCAT AGGCG ACGCACAG            CGTATTGCTCCTCAT  66 62
D558_RS17660 3619052 .. 3619065 -  -2.3  -3.82604   CCAGGCAAGGAACAA               GGCGT CGTA ACGCA                GGCAGAGCGCTTTTG  53 114
D558_RS17655 3618219 .. 3618244 -  -7.5   -3.5394   AAAGTTTGTCGCAAA         GGTTGCCAAGC TTGA GTTTGGCGACC          CTCAGAAGCCCTCCA  60 513
D558_RS17625 3613592 .. 3613602 -  -5.4  -3.85698   TCTCTGCGTTAGAAA                 GAAG GTG CTTC                 GCGATATCCGCGCGA  61 63
D558_RS17620 3610493 .. 3610512 - -11.4  -3.80573   TGGACGAGGATCAAA            GCGGGCCGG GAG CCG-CCCGC            GGCGTCCGTGAAATG  81 394
D558_RS17615 3609460 .. 3609470 -  -5.4  -3.03525   CTCACCTACACAAAC                 TGAC CCG GTCA                 CGCTTGGCGGAATCC  49 23
D558_RS17610 3608759 .. 3608772 -  -2.3  -3.37612   CGTAACGGCAATCAA               GCACG GCTC CACGC                TATTCCGCGATGAAC  46 8
D558_RS17605 NONE
D558_RS17600 3606778 .. 3606815 -  -9.8  -3.10715   CTCAGCACCAGGCAA   GGCCGGGCCCGCGTCCT ATCAG AGG-CACAAGCGCGGCC   TGCCGCCCCCTCGCC  64 72
D558_RS17595 NONE
D558_RS17590 3604791 .. 3604803 - -10.5  -3.28181   CAAACCCAATGAAGA                CGCGG CAC CCGCG                GGGCACCCATTCAGG  68 54
D558_RS17585 3604166 .. 3604192 - -21.6  -2.90615   ATCCCTTCCAAACCA         CGGGCGCTGGCC ACA AGCCAGCGCCCG         TTTCTTTTGGGCAAT 100 40
D558_RS17570 3600846 .. 3600894 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS17565 3600271 .. 3600288 -  -5.5  -3.29043   AATCCTCGCCGACAA             CGGCAGCC CCC GGC-GCCA             GCGCATACTGGGTTT  51 387
D558_RS17555 3595507 .. 3595537 - -24.1  -5.24129   CTTGCTCATAAAAAA       CCCGGCAAGCGGC TGGTG GCCGCTTGCCGGG       TTTGCGATAAGAGGA 100 49
D558_RS17550 NONE
D558_RS17545 3593012 .. 3593045 -    -8  -3.19157   GAGTAACGCTATCAA     GCCCAGGTCTGCGCG CAAGC CGCGCTGGCC-GAGC     GCCAGGCCGCGATGT  59 328
D558_RS17450 3576482 .. 3576520 - -16.9  -4.86731   CGGTTGGAAATAAAA  GCGCACCGGCCAGAAC GTTTCAGG GTTCTG-CCGGTGCGC   GATGCATTGCGGGGT 100 55
        guaA 3574674 .. 3574686 -  -9.1  -3.57144   TTTTTTACCGTCAAA                GACCG GTT CGGTC                TAAATAGTAAACAGG  66 203
D558_RS17440 3573237 .. 3573269 - -10.6  -3.14294   AATAGCGACACCTAA      GGTGCTCATGTCGT TCTTG ATGACATGAGCGCC      TCGCCATGTCCCCAA  66 58
D558_RS17435 3571946 .. 3571962 -  -2.3  -2.81966   AAAATTCAGGGAAAG              GATCA TCCAGAG TGATC              TTCTTTGGAAAAATG  39 80
D558_RS17430 NONE
D558_RS17425 3570084 .. 3570099 -  -3.2   -3.5882   TATATCAGTGTGAAA              TCGTGA GCCA TCGCGA               TCACCCGATCGCCTT  49 57
D558_RS17420 3569829 .. 3569851 -  -6.3  -3.72576   CCCTGTTCGATGAAA           TCGCCGT CTAGCGTCC ACGGCGA           CTACCCGGCATCCAC  61 152
D558_RS17400 3567241 .. 3567258 - -14.1  -3.21276   GCGGGGCCCATAACA             GGCCCGC TCTT GCGGGCC              GGCCCCGGACGTCAC  86 61
D558_RS17375 3562423 .. 3562450 -  -9.9  -4.52589   GGTCTGCACAGAAAA        CTACGCCTGCT CGCCCT AGAAGGCGTAG         ACACGACAGCATTTT  86 91
D558_RS17360 3559396 .. 3559409 -  -8.1  -3.92143   GAAAATGGCGAGAAA               CCTGC GGCG GCAGG                GTTTAGAGTGGATGA  68 507
D558_RS17345 NONE
D558_RS17340 NONE
D558_RS17335 NONE
D558_RS17330 NONE
D558_RS17325 NONE
D558_RS17320 3552665 .. 3552678 -  -4.5  -2.57757   AATGAAGTCAATGGA               CG-GCC TCG GGCGCG               AACTCGCCGCCCAGA  43 4
D558_RS17315 NONE
D558_RS17310 3549582 .. 3549593 -  -7.2   -3.3244   CCAAAAAACGGAAGA                CGGC CGGC GCCG                 AGGCAGCCTAGCCTG  56 458
D558_RS17300 3548082 .. 3548104 -  -6.2  -4.30719   GGGCCGGACAAGAAA           TTGGTGGTGC AAA GCAGCGCCAA           TCAGGACAGCCCCCT  70 260
D558_RS17285 3545615 .. 3545658 -   -11  -4.42386   TCGGCACGCAGAAAA CGCAGCGACC-CGCCCGCCA ACTGCA TGGCGGGCCTGGACGCTG-G CAAAGACCAGTCCGG  93 88
D558_RS17280 3544748 .. 3544762 -  -7.2  -3.05384   CCTCTTTCCAGTCAA               TGAGAA TAA TTCTCA               CGAGATTCTAGAAAG  54 100
D558_RS17275 NONE
D558_RS17270 3542226 .. 3542240 -  -2.1  -2.68387   CTGCATAAAAGACAT               CAAAC CTCCT GCTTG               CGATGCTCACCGCCC  38 10
D558_RS17265 3540697 .. 3540707 -  -4.6  -3.53012   CCTGGCTGGCGCAAA                 GCCA CAC CGGC                 GTAGCCATGGCATTG  53 338
D558_RS17255 3538804 .. 3538830 -  -4.2  -3.22618   GCCGGACATAAGAGA         CGGGGTCTAGCC GAC GGCCTGAGCCAG         ATAATCCACGAAGGA  47 5
D558_RS17220 NONE
D558_RS17215 3534140 .. 3534152 -  -2.6  -3.51924   GGTGGACTCATACAA                CCGC GCGCT GCAG                ACCTGCCGGGATCAG  47 63
D558_RS17200 3531297 .. 3531322 - -14.7  -2.85351   CGCCGCTACAGTAGA         CCTATGGCGCC TGTC GGCGCCCTAGG          AGAGCGGAATGACCG  80 390
D558_RS17190 3530155 .. 3530172 - -14.1  -2.78384   CCGGGCGCCACGACA             CGGCGCC GCCA GGCGCCG              GCTCATTGTTGAGGA  80 82
D558_RS17185 3529306 .. 3529343 -  -5.4  -3.50853   TGGCGCCAAGCATAA   CCGCTTGCGCGCCCGTT CTTAT ATCAGGC-CGCGCGCGG   CCAGCTCGCGGCTGA  55 6
D558_RS17180 3528421 .. 3528447 -  -5.9  -3.65351   CGACGGCCAGGGAAA        GATCAG-CGCGA TCCG TTGCGGCTGATC         CGATTCAACCGGGTT  58 30
D558_RS17165 3525831 .. 3525856 - -12.5  -3.10112   ACGCAACGCAGCCAA         CGACGGCCGGA CCTG CCCGGCCGTCC          GCCTGACGGAAGCAG  76 73
D558_RS17155 3523687 .. 3523703 -  -6.5  -3.65902   CGGATTTCATCGAAA              GCGGC GAATTCA GCCGC              CACCTGGGTCGTATG  59 346
D558_RS17145 NONE
D558_RS17120 3515949 .. 3515985 - -20.1  -3.69621   AGCCAGAATGCGAAA    GCGGGCCATGAGCGGCA TTA TGCCGCCCTTGGCCCGT    GGGCGCCCAGAAGGA 100 42
D558_RS17115 NONE
D558_RS17110 3514458 .. 3514486 -  -3.7  -2.52543   ACGGGTGCGAAGCCA        TGGATGCGGGCAG GTT CAGCGCACATGCA        GGCGATCCAGCCGCA  41 12
D558_RS17105 3513710 .. 3513747 -  -3.3  -3.59262   TCCCAGACGGCCAAA   GGCACGATCTTCGTCACC ATC GAGGATGA-GACCGGGCC   AGTCAATGTCGTGGT  51 240
D558_RS17085 3507491 .. 3507521 -  -5.3  -3.02144   TCACTGGCTGCAACA      GGCTCAGGGCAGCG GCAT CGCCGCCTTG-GCT       CACTTCGCGCTCAAG  49 160
D558_RS17060 NONE
D558_RS17045 3501684 .. 3501706 -    -4  -4.46615   GACCATGAAGCAAAA           CCGCAACAAC GTA GTCGCAGCAG           CCCTGATAACCGCCA  71 448
D558_RS17000 NONE
D558_RS16995 3492811 .. 3492822 -  -4.4  -2.68493   GCCATCAGCAAACAG                TTGC TGCC GCAA                 GCACCCTGCCGCAGT  43 427
D558_RS16955 3484092 .. 3484137 -  -9.6  -3.95584   TGTGCAGGAAGGAAA CGGGTCGGGAGCTCATGCCA GGATTG TGGCACAAGCCCCTGCACCG GACAGGGCGATTGCC  78 46
D558_RS16950 NONE
D558_RS16945 3481264 .. 3481280 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 494
D558_RS16935 3479291 .. 3479321 -  -8.3  -2.52623   GCTGCGCCAGAAGAT      CGCCCGTGAGCAGA AGAT TCAGCTCACGGA-G       TAAATGCGTCGAGCT  53 18
D558_RS16925 3474969 .. 3474981 -  -2.6  -2.63715   ATCCACTCCATATCA                CGCC CCCTT GACG                GCCGTTGCTGCCTGC  38 10
D558_RS16920 NONE
D558_RS16915 NONE
D558_RS16910 NONE
D558_RS16905 NONE
D558_RS16900 3471821 .. 3471845 -  -4.9  -3.65902   TCTACCTTACGCAAA          TCTCGCCCATG GAT CTTGCGCGAAA          TGTTACAGAGCTGTC  56 55
D558_RS16895 3471244 .. 3471255 -  -3.6  -3.14132   GCGTTTGTCGATCAA                CGCA TCGG CGCG                 GCGGCCGGTTGCAGG  45 10
D558_RS16890 NONE
D558_RS16885 NONE
D558_RS16880 3468689 .. 3468703 -  -8.5  -4.14739   TCATCGACGGCAAAA               GGCCG CGGGC CGGCC               CGGCATGCAAAGCGA  78 165
D558_RS16875 3466923 .. 3466940 - -12.7  -5.38951   AAGTCATATAAAAAA             GGCTGCC CCGC GGCAGCC              TTTTGGCAGGATCCG 100 72
D558_RS16870 3466025 .. 3466043 - -11.6  -3.63991   CAGTATTGCGAATAA             GGGCGCGC CAG GCGGGCCC             GATAATTTAGGCAGC  78 32
D558_RS16865 NONE
D558_RS16860 NONE
D558_RS16855 3463392 .. 3463423 -    -2  -3.23853   TTCCTGGAAGGAACA      GGCGGCGGCTAGGG TCTG CAGCATACGCCGCC       ATTGTACTGCGGGGC  44 41
D558_RS16850 NONE
D558_RS16845 3462737 .. 3462755 -  -7.4  -2.62246   CCAAGGTCAAGGAAG             TGGACATG GCC CAGGTCCA             TCGCGATATTGCCGA  50 78
D558_RS16825 3458586 .. 3458611 -  -5.3  -2.70932   CCCCCTGCGCAACCA         GTTGGTGCTGGC CAC GCC-GCGCCAGC         GTCCGGCCACCCGTC  44 113
D558_RS16815 NONE
D558_RS16810 NONE
D558_RS16805 NONE
D558_RS16800 3454303 .. 3454317 -    -7  -4.07568   TGGCTGGCGGTAAAA               CTGGCC CCG GGCCTG               TCGCCGCTGACCTAC  68 403
D558_RS16790 NONE
D558_RS16785 NONE
D558_RS16780 NONE
D558_RS16775 3450517 .. 3450547 -  -5.3  -3.13522   ACTGCGGGAGCAATA      GTCACGCCAGCGGC AATC GCCA-TGGCGAGGC       TGGCAAGCGAAGTAC  49 176
D558_RS16770 3449967 .. 3449983 - -15.1  -5.14563   CGCGCCATGAAAAAA              CCCGGCC ACC GGCCGGG              TTGATCGTTGCGCGG 100 48
D558_RS16765 3448812 .. 3448836 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 151
D558_RS16750 3446128 .. 3446163 -  -9.6  -3.38201   CAATACCCTCAAACA    TCTGGCCCGCCACTGC CAGG GCGATGACAGGCCCGA     CTGTCCCATCATCGC  64 62
D558_RS16735 3443114 .. 3443160 -  -9.7  -2.62613   CTCCACTTTAAATAT TTGCTATCGATCAATCCAATT CAATT ATTTAAATTGATCGATAGCCA TTCCAAATCGCCCCA  60 51
D558_RS16730 3442297 .. 3442314 -  -6.9  -2.61912   CTAGGGAGGTACAAC             GTGGGGC GGCC GCCCCAA              CCGGCGATCAGCCGA  50 33
D558_RS16725 3440487 .. 3440504 -  -5.5  -3.01231   AAAGAAGGCATAAAG             CGTTTCG CGAC CGGAACG              TATGCGGTGTGGTAT  48 321
D558_RS16710 3436870 .. 3436905 - -18.4  -4.87291   CACCCCAATGAAAAA    GCCCAGCC-GACGTTGC TGA ACAACGTCTGGCCGGGC    CTGAAACCCTTGCTG 100 49
D558_RS16700 3435483 .. 3435496 -  -8.1  -3.26649   AGATCGTCAGAGCAA               CCACC ATGG GGTGG                CTGCTCTGGGGGCAT  57 139
D558_RS16690 3425480 .. 3425508 - -21.9  -5.65513   GATGAACCAAAAAAA        GGCGGAAAAGGGA AGA TCCCTTTTCCGCC        AACCAGGCAAAGCCC 100 45
D558_RS16685 3424202 .. 3424239 -  -8.3  -4.23758   AGCGGATAGTGAAAA   CCGTGGCCCGGCGGTGTC ATT GACAT-GCCGGATCGCGG   CGGTGGAGATCTTGG  74 4
D558_RS16680 3423776 .. 3423807 -  -2.9  -2.56596   GCTTTCAGGAAGGGA      TGTCAGCCG-CAGC CACTT GCTGTCAGCTGGCC      TATTCGGGTCAGGGG  40 34
D558_RS16675 NONE
D558_RS16670 3420290 .. 3420322 -  -4.7  -2.75992   TCGCACTGAACAGGA      GGCCCGTCGAACATT GCA AAAGCCGGACGCGCC      CATGTGAGTAAGGTA  44 74
D558_RS16665 3419188 .. 3419198 -  -6.8  -3.54741   GACGATTGCGCCAAA                 GCAG GCC CTGC                 CGCAGACAAGCAGGC  60 90
D558_RS16660 3417339 .. 3417371 -   -12  -2.62184   CCCTGCTCGACAGTA     CCGGGTCGCTGCCGC TGCT GCG-CACCGACCCGA      ACGATCCTGACGAAG  64 162
        glnH 3415475 .. 3415511 -   -10  -5.00616   TTCTGGCGGAAAAAA    CATGGCCGCCGGCGAG ACCTG CCCGCAAGCGGCCAAA    GGTTCTTTCAGATCA 100 46
        glnP NONE
        glnQ 3413968 .. 3413994 - -22.4  -2.61602   TCAAGGGATAAGCCA         CTATGGCCCGGC ACC GCCGGGCCATAG         TTCTCTGGGCGCTGC 100 97
D558_RS16620 3409745 .. 3409756 -  -2.2  -3.92869   GCAGCTACCTAGAAA                GCAA TCCA TCGC                 AATTGCTGGCCCAAA  55 88
D558_RS16610 3407410 .. 3407429 -  -2.1  -3.23018   CCTACAGATGAAAAG            CCGCG-AG TATGG CTACGCAG            TGTTACAGGTGCATG  44 53
D558_RS16605 3405957 .. 3406004 - -15.4  -4.26003   AGAACATCGAATAAA GCATTCGCGGAGCAGGCCTGGC TCGC GCCAGGCGTGCTCCGCGCCGTC TGACAGGCAGGCGCT 100 59
         rph NONE
D558_RS16590 3403670 .. 3403684 -  -4.2  -4.26076   GCAGGCTCAGGAAAA               GCGCAA TGC TTGCGG               TGCAACGTCGGGCTG  65 2
D558_RS16575 3399613 .. 3399645 -  -5.6  -3.25823   GTGCGTGTAGACCAA     GCGAACCAG-TTG-CG GCA CGACAAGCCGGCCCGC     CGGGTGATCAAGTCC  51 461
D558_RS16565 3396728 .. 3396785 -  -3.4  -3.53012   TGCTGTGCGCCGAAA TCATTCGCCGCCATTGCGACGCG-CAACG CGA CTTTGTCG-GCCACGTAGGCGGCGA-TGA CTTCGTCATCGCGTT  49 270
D558_RS16555 3394495 .. 3394505 -  -2.4  -3.40907   GGATAGGAATAGTAA                 TGGC CAT GCCG                 CTCAGAGTGCCTGCA  46 27
D558_RS16550 3393117 .. 3393143 -  -6.4  -4.09685   CTCCATTGGGTAAAA         GCGTCACGGGCA TAG TGCCCGACAGGC         CTAGAAAGCTAAAGC  66 160
        glnA 3391611 .. 3391635 -  -7.8  -3.53012   CTCCGGGGCGGGAAA         GTCGGCGGGTC GAAT GACCCGCCC-C          TAGCAGACTCCGCCC  62 74
D558_RS16540 NONE
D558_RS16535 3388982 .. 3388998 - -13.7  -5.40072   GCCGGCGCAAAAAAA              GCCGCTC AAT GAGCGGC              TTGTTGGGGATGGGC 100 51
D558_RS16525 3387031 .. 3387045 -  -8.5   -3.4582   TTACCTCATCAAACA               GGGCG CCGTC CGCCC               GGGTTGCGACTCACC  64 87
D558_RS16520 3385962 .. 3385988 -  -5.1  -3.93695   GGCATCATGGACAAA        GGCCGCATCGCC CAGT GG-GATACGCCC         TACAACCTGCATCAT  60 141
D558_RS16500 3381375 .. 3381396 - -12.3  -5.96521   ATGAACCAAAAAAAA           GCCCGCCAT CGAC ATGACGGGC            TTGGCCGGCGGCACA 100 50
D558_RS16485 3378281 .. 3378296 -  -2.6  -2.78384   GCTCGCCGTATCAGA              GAA-CCA GAA TGGCTTC              GACCTCGAACTGCGC  39 5
D558_RS16480 3376150 .. 3376168 -  -8.1  -4.08216   CCACTCCTGGGAAAA             GGACCGC TCGCG GCGATCC             ACGCAATAAAGAGAC  71 42
D558_RS16475 3375142 .. 3375155 -  -2.3  -2.53263   CGCAGCGTCAAGGTA               TGGAC GGAT GGCCA                TTTCCGCTCTTGGAT  38 40
D558_RS16470 3374348 .. 3374361 -  -3.7  -3.65199   AATTGGTGATGCAAA               GCCTG CGTA CGGGC                AACCTTAACGAAGGG  53 182
D558_RS16450 3368665 .. 3368675 -    -4   -3.3692   CGCCAGCGCAAAAAC                 TGAA AAA TTCA                 TACCTAGGCAGGTTA  49 60
D558_RS16445 NONE
D558_RS16440 NONE
D558_RS16435 NONE
        tviE NONE
D558_RS16425 NONE
D558_RS16420 NONE
D558_RS16415 3360038 .. 3360060 -  -3.4  -2.71712   TCTGCCCTTCCAAAG           CGTTGTGG TGGCCAG CGACAACG           ATCCGTATTGTTCCT  40 258
D558_RS16405 3358321 .. 3358346 - -14.7  -5.38249   ATGAACCATAAAAAA         GGCTGCCTGCA ACTA TGCGGGCAGCC          TTTTTTTGGCCTGGC 100 43
D558_RS16375 NONE
D558_RS16370 3350836 .. 3350874 - -17.4  -3.75937   AGAGAGAGATGGAAA   TGGCGGCACCTGCTGC GATCTAT GCTGCAGGTGCCGCCG   TTGTGCTATCGATGC 100 81
D558_RS16365 3349382 .. 3349414 - -14.2   -2.6162   GAATGCTCCAAATAG      CTCCGGCTCCGG TAATGCCAC CCGGAGCCGGAA      ACCTTGGCTCTGCGG  78 76
D558_RS16360 NONE
        livM NONE
        livG NONE
        livF 3345457 .. 3345470 -  -3.8  -2.94912   CGCCGAATGCATAGA               GCGT CTGCGC ACGC                GCGGTGCGGATGCCG  44 286
D558_RS16325 3341043 .. 3341074 -  -2.9  -3.53444   TCATTTGGGGTGAAA     CACCGGCGCTC-TCG GCCA CGTTGGGCG-CGGTG      TTCATCGCCGGCAGC  49 96
D558_RS16315 NONE
D558_RS16310 3338552 .. 3338562 -  -5.4  -3.85698   GGCGCGGGTCATAAA                 CGAA TTT TTCG                 CAGCGCGCGACACGG  61 227
D558_RS16305 3337185 .. 3337199 -  -2.1  -3.79251   CAGCTGATCATCAAA               GGAAT CATGC ATCCC               GCCGACGCTGCCCTG  53 462
D558_RS16195 3309224 .. 3309252 -  -7.4  -3.28712   CTTCCTGTCGGAGAA       CGGGCTGGGCCTG GTCG CAGGCC-AGCACA        TCATCACCGGCTCCT  57 164
D558_RS16185 NONE
D558_RS18240 3306865 .. 3306878 -  -8.1  -2.64933   CAGGCAGCGACACCA               GCAGC AAGC GCTGC                CATTCCTCCTAAACC  53 34
D558_RS18235 3305975 .. 3305988 -  -9.5  -3.41836   ATAGTGATTGAAATA               CGCGC CGGC GCGCG                AGCCAAAGAGTACAC  67 54
D558_RS16175 NONE
D558_RS16170 NONE
D558_RS16165 NONE
D558_RS16160 3301013 .. 3301023 -  -2.4  -3.48276   CGGGCGCGGAGATAA                 CGGC GTC GCCC                 TTTTTTTGCTGATAA  47 362
D558_RS16145 3298618 .. 3298643 - -10.3  -3.91716   TGACTCCTCAAATAA         TCGGGCCAGCC CGAA GGCTGGCCCCT          GTATCGCCCAGTTTA  77 265
D558_RS16140 3297945 .. 3297970 -  -6.8  -3.80279   CGCAGAAACAGATAA         GC-GCCGCAGC TCTAT GCCACGGCAGC         GAGCCGAAGCCGCCA  66 74
D558_RS16135 3297067 .. 3297086 -  -6.4  -2.73771   CCAGCAGAGATATGA            CGTAGTCC ATGC GGAGTACG             GGCGGTCAGCTGACC  49 52
D558_RS16130 NONE
D558_RS16125 3295620 .. 3295659 -  -2.6  -3.13403   GCGGGGCTAGCAAGA  GGGGGTCTTGGCGCTTCG GATG CGGGACGCCAAGACCGTT   TTTTCAGAGCATCTG  41 29
D558_RS16100 NONE
D558_RS16095 3288125 .. 3288168 -  -7.4  -3.54935   TAAAGGCGTGCCAAA GGGTTGCA-GCCATCCTAGCG CGC CGCTGGAATGGTGCGCAAGCC ACGTCATGAAGCGGG  60 29
D558_RS16090 3286744 .. 3286757 -  -2.3   -3.9392   GTGCAGGTCAAAGAA               CTGCT TGAA AGCGG                TTGCGCGGACGAGTG  55 351
D558_RS16080 NONE
D558_RS16075 NONE
D558_RS16070 3282876 .. 3282924 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS16065 NONE
D558_RS16060 3282369 .. 3282399 - -21.3  -3.07935   AGGTCACGCATTCAA       GACAAAGGCCGGG GATTT CCCGGCCTTTGTC       TTTTTGACCTGCCCC 100 46
D558_RS16045 NONE
D558_RS16040 3278213 .. 3278225 -  -6.9  -3.65542   TGCATTGCTAAAACA                GGCCC GGC GGACC                AAACAGCGCCAATCA  63 150
D558_RS16035 3276103 .. 3276119 -  -4.3  -3.14132   CGCCTCCTCGACCAA              CGCCGCA TTC TACTGCG              TCACCTCGTCCATCT  45 18
D558_RS16030 3275855 .. 3275875 - -12.6  -4.67607   TCTTGAAGAAAGAAA            CGATCCGG TTTGG CCGGATCG            TCGCGGGAAGTGAAT 100 94
D558_RS16025 3273704 .. 3273714 -  -2.4  -3.09327   CGACCGGAGCCAACA                 CCGC GGT GCTG                 TCTCGCTTTCTGAAC  42 478
        fliE 3262326 .. 3262346 - -13.3  -3.16267   CTGAATCACACCGAA            CTGCTGCGC GAT ACGCAGCAG            ATCATGGACATTCTG  72 379
D558_RS15915 3257228 .. 3257238 -  -5.4  -3.55444   CTCGGACTGCCCAAA                 TCCT ATT AGGA                 ACCTCAGTGGTTCTG  55 29
D558_RS15890 3251951 .. 3251964 -  -3.7  -3.25823   CCCGCTGCACACGAA               CCCGC GGTT GCTGG                CGAAGGGCCTACGCC  47 77
D558_RS15885 NONE
D558_RS15880 3250600 .. 3250616 -  -6.5  -3.12862   ATCAATGATTCAATA              TGGCAGC CAG GTTGCCA              GCGACGGTGGCAATG  52 3
D558_RS15875 3248990 .. 3249007 -  -5.5  -4.57073   GACCCCCCTCAAAAA             GGCGGAT GCCG ATCCGAC              CTTTTTTGGGGGCCC  75 48
D558_RS15850 3242586 .. 3242606 -   -14  -2.79133   CAATTCGCTATGACA            TGCCCCGG AAGGA CCGGGGCA            TATGGTTTGATTCGT  76 130
D558_RS15845 3241627 .. 3241663 -  -8.7  -3.83144   GTAAGACAAGAAATA   GGCCGG-TCACAGAGG ATTTGG CCCCTATGCGCCGGCC    CTTAGGCACTAATTT  72 46
D558_RS15840 3240868 .. 3240882 -  -2.1  -2.71712   TTTCCTTTTTTAAAC              GTGCAC CAGC GTGC-C               TTCGTCTTCGCCTCC  39 5
D558_RS15835 3240249 .. 3240278 - -14.9  -4.56775   ATCGTCCTTGAAAAA       CGGCCCGAGCGCA AATG CGCGACCGGGCCG        GTTCCCTGCTTAGAC 100 35
D558_RS15830 3239312 .. 3239328 -  -2.9  -3.29144   CTATGGCGGTGACAA              TACGCTG ACC CAGCATG              AACCGTCTCCTCGGA  45 55
D558_RS15825 NONE
D558_RS15820 3237232 .. 3237288 - -17.8  -2.52464   CCGGCGGGGAATCGA CGTGCCGGATCCGCGAGCCGGGCCGA TGAGG CCGGCCAGGCCAGCGGATCAGGCCAG ACCCAGGTTGCCGGC  87 17
D558_RS15815 NONE
D558_RS15810 3233286 .. 3233299 -  -4.5  -3.72893   TATTGTGCCACTAAA               CCGCT GGGG AGCGA                GCCTAAGCCCATAAC  56 144
D558_RS15805 NONE
D558_RS15800 3231541 .. 3231568 - -14.8  -2.81937   AATGTAAATAGATGA        CGCGAGGCCGCC CGGG GACGGCCTCGCC         TAAACAGGTTTCGCG  80 50
        fabZ NONE
D558_RS15790 NONE
D558_RS15785 NONE
        rnhB 3228492 .. 3228502 -  -4.6  -2.85668   GAGTTTCATAGCACA                 GCGC CAA ACGC                 CTTGATCGGTGCGAA  44 5
D558_RS15775 3227636 .. 3227667 -    -3   -5.0133   CACGGGCCGAAAAAA      TGCATTCATTGAAA CCGC TCCCATTGAATGCC       TGCCAGCATAGCGAA  76 64
D558_RS15770 3227041 .. 3227083 -  -8.2  -2.75064   CTGTCCATCCAACCA GACCGCCTGGCCGAAGTGCG CAA CGAACGCCGGCCCAACAGCC AGTACGCGACCATCG  53 188
D558_RS15760 3223830 .. 3223853 - -18.2  -5.60993   CCGGCCACAAAAAAA          GGCGGCAACC TCGC GGTTGCCGCC           TTTTTCATGGTGCAA 100 55
D558_RS15750 3222488 .. 3222504 -  -4.3  -3.00946   TCCCCCTACAAATGA              GCTGGCG CCG CATCAGC              GCGCCGGGTGAGACT  44 21
D558_RS15745 3221452 .. 3221462 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  60 106
D558_RS15740 3220085 .. 3220119 -  -2.6  -3.66018   CGACCATTTCAAGAA     GGTCAACGACAGCATG GGG CACGCGGCCGGGGACG     CCGTGCTGCGGCATT  50 354
D558_RS15715 NONE
D558_RS15710 3215889 .. 3215908 -  -5.6  -4.19371   GAAAGCGGGAAGAAA            CCGCCG-GC CAG GCGCGGCGT            TACGGCAGGGCTAGA  66 36
D558_RS15705 NONE
D558_RS15700 NONE
D558_RS15695 NONE
D558_RS15690 NONE
D558_RS15685 3211517 .. 3211527 -  -2.4  -3.46647   GCCACTCATTAAAGA                 CGTG TTG CGCG                 AAGTACCGCTGACTC  47 189
D558_RS15665 3208203 .. 3208221 - -14.6  -3.57144   CGCGGCACGGTCAAA             CGCCGCAT GGC ATGCGGCG             TGACGGCGCTGCCCG  87 272
D558_RS15655 NONE
D558_RS15650 NONE
D558_RS15645 3204640 .. 3204660 -  -2.5  -5.42862   ACATGGGCAAAAAAA            TGGCAAAAC CTA GCTCTGGCA            GGATAGCACCACACG  84 14
D558_RS15640 NONE
D558_RS15635 3202960 .. 3202973 -  -9.5  -5.71712   CCGGACACAAAAAAA               GCCCC TTAC GGGGC                TGGTCGAACAAGGCG 100 58
D558_RS15630 NONE
D558_RS15625 3201295 .. 3201308 -  -2.4  -3.56973   AGACAGGAGAAAAAT               CCAA CATCAT TTGG                CGGGAGCCTCAAACC  47 18
D558_RS15620 NONE
D558_RS15615 NONE
D558_RS15610 3198863 .. 3198906 - -12.5  -3.53224   GATTGCCCGCGCAAA TGG-CGCGGCCGGTTTACAC AATAA GCGCAAACCGGCCGAAACCA AAGCATGACAGTACC  81 50
D558_RS15605 3198070 .. 3198085 - -10.4  -6.30182   GCACATAAAAAAAAA              CGGCCT TCAA AGGCCG               TTCGCTGCCGCAGCG 100 42
D558_RS15600 3196473 .. 3196483 -  -4.6  -4.05446   GGCCTCAAGGATAAA                 GGCC GCG GACC                 TGACGCGCCTGCAAT  62 4
D558_RS15560 3190077 .. 3190087 -  -6.8  -2.79915   AGGGACCTGACGACA                 GGCT CAG AGCC                 CCTGTTTCTCCAAGC  51 18
D558_RS15550 NONE
D558_RS15545 3186579 .. 3186598 -  -2.1  -6.34424   CTCCGAAAAAAAAAA            GTGTGTC AGTGTA GAAACAC             CTTCTCTCGCGCCGG 100 71
D558_RS15540 3186137 .. 3186147 -  -2.4  -4.46112   CCCTAGGGAAATAAA                 GGCG CGC CGCA                 TACACTAGCGGGTGG  64 30
D558_RS15485 3173823 .. 3173845 -    -9  -2.55074   CGCAATGGCAAGGCA           GCGACGGCGG TGG CCGCCTTCTC           GGTACGCGGCCGCCC  53 226
D558_RS15470 3170635 .. 3170652 -  -8.5  -3.70307   TCGATGGAACAAATA             GCTGTAT GAAT ATACAGC              AGCATCATACCAGCA  69 274
D558_RS15465 NONE
D558_RS15460 3166760 .. 3166774 -  -2.7  -3.47078   GAGCGTACACGACAA               CGCCG CAGAT CCGCG               CTCAGGTCAAGGCCC  46 27
D558_RS15455 3165373 .. 3165383 -  -6.8  -3.01712   TCTGGTCGGCCAATA                 CGGT CTG ACCG                 CGGGTCCGTCTTGGG  53 51
D558_RS15440 3161911 .. 3161936 - -10.3  -4.57569   GTATCTCGGCAAAAA         CCTCCAGGGGG CCCT CCCTCTGGCGG          GTCCGGCCAATCCGG  89 114
D558_RS15410 3156801 .. 3156849 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS15405 NONE
D558_RS15400 3156308 .. 3156321 -  -3.1  -3.00766   AAGACGTGACATATA               TCACA CTCT TGCGA                TGGGCCGTGACCTGC  42 49
D558_RS15395 3155745 .. 3155766 -  -7.3  -2.78463   AGGCGCTGCAGCAGA           TCACGC-CCA GCA TGGCGCGCGA           GATGGTGTTCCTCCC  51 322
D558_RS15340 3142586 .. 3142634 -  -6.6  -2.70932   CGCCGCCGGCAATGA TGGCACGGATCCGTGACCGGGC GCGGTCA GCCCGGGC-CGGA-CCGCTCCT CGTTGTCCGCGGCGG  49 3
D558_RS15335 3141696 .. 3141706 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  60 60
D558_RS15330 NONE
D558_RS15325 3139855 .. 3139892 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  60 26
D558_RS15320 3138177 .. 3138191 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  62 476
D558_RS15300 3133167 .. 3133182 -  -3.2  -2.87132   TGGCCTCCTTACAGA              TCCTCG GAAC CGAGCA               GCATCTCGGTCAGCC  42 3
D558_RS15295 3132632 .. 3132659 -  -8.2  -2.55074   GTGAATGCTAATGCA        GGGTGGCGCGCC GCCA GGCGCGCCGGTC         AGATTTTCAGTATCC  53 24
D558_RS15290 3131502 .. 3131519 - -14.1  -5.79595   GCGGAAAAGAAAAAA             CGCGCCC TGTG GGGCGCG              TCTGGACCAGCCTGC 100 75
D558_RS15285 3130435 .. 3130448 -  -8.1  -3.27022   GCCAGCCGAGATCAA               GCAGG TCGG CCTGC                CCAGCGTGCGCCAGG  59 199
D558_RS15275 3129854 .. 3129877 -  -4.5  -3.63367   GGTTTCAAGAAAAAC          GAGC-CCCGA GACAA CCGGGCGCCC          TGTTACGCTGTTGCC  53 28
D558_RS15270 3129459 .. 3129493 -   -20  -4.98531   CTTGCAAATGAAAAA     CCGTGGCCGTCGCGAC AAC GTCGCAGCGACCACGG     TTGCGTCATGGGGAG 100 54
D558_RS15265 3127221 .. 3127250 - -19.5  -3.75153   CTTTTGCAAGCGAAA       GAAAAATGGCGCC CGAA GGCGCCATTTTTC        TGCACTGTCAAACCG 100 42
D558_RS15260 NONE
D558_RS15255 3125109 .. 3125125 -  -5.1  -3.78034   CATCGACATCAAGAA              GCTGG GACGTAT CCAGC              GCCCTGGCCACCGGG  58 514
D558_RS15245 3123857 .. 3123876 -    -7  -3.13403   TTGCGGCCACCAACA            CCCCCCGC AGGT GCAGGTGG             CCACCTGGAATCTGA  51 249
D558_RS15230 NONE
D558_RS15225 3120136 .. 3120151 -  -8.2  -3.04792   TGACGACGTTGAAGA              GCGAGG TTTT CCCCGC               GCCGTTCGGCCCGAT  57 138
D558_RS15215 3118422 .. 3118435 -  -2.3  -3.37612   CGTAACGGCAATCAA               GCACG GCTC CACGC                TATTCCGCGATGAAC  46 42
D558_RS15210 NONE
D558_RS15205 NONE
D558_RS15200 3115201 .. 3115218 -  -9.8  -5.65513   GATGAACCAAAAAAA             GCCGCC ATGAAA GGCGGC              CTAGTAATGGCCGGC 100 73
D558_RS15185 3112819 .. 3112856 - -10.8  -2.80816   GGTGCATGGATGAGA  CAACGCACC--CCGATAGC CGA GC-ATCGGTAGGTGCGTTG  ATTGACGTAAACGCT  63 103
D558_RS15180 3111556 .. 3111572 -  -2.9  -3.55761   CAGCCACCGCTCAAA              GCCCA TGACCGC CGGGC              GGGCATTCCCGCTCA  49 48
D558_RS15170 3109927 .. 3109950 -  -2.2  -3.72576   TGCGTGGCGACGAAA          GCCGCCCGCT GGAA AGGGTGCTGC           CCGACTGGCATGCCG  53 252
D558_RS15160 NONE
D558_RS15155 NONE
D558_RS15150 3103086 .. 3103110 - -19.3  -4.69664   CAGATTACCCAAAAA          GGGCGGGCACA TTA CGTGCCCGCCC          TTTTTCAATCACGGC 100 48
D558_RS15135 3101001 .. 3101035 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
        aceE NONE
D558_RS15100 NONE
D558_RS15095 3087980 .. 3087995 - -11.8  -3.63627   TTGGCAGACGCCAAA              GCCGCC CGAA GGCGGC               TTTGGCGTGCGCGGC  81 48
D558_RS15090 NONE
D558_RS15085 NONE
D558_RS15080 NONE
D558_RS15075 3084883 .. 3084920 - -10.6  -3.66356   ACGCGCAATGGCAAA  CGCGCC-AGGCT-CGCCA GACG TGGCCTAGCCCAGGCGCG   GTTGGCATTTAGTCC  75 34
D558_RS15065 3082467 .. 3082481 -  -3.5  -3.82807   ATAACATACTAATAA               TAGCC TGTTT GGCCA               TCCGACAGTCCCCGG  55 187
D558_RS15060 NONE
D558_RS15055 NONE
D558_RS15050 NONE
D558_RS15045 3079578 .. 3079620 -  -3.8  -4.17089   CGCAAAGCGTGAAAA TCATGCGCCGGCTCTACGCC ATG GGCGTGGGGCTGTCGATCGA TGACTTTGGCACGGG  62 392
D558_RS15020 3073899 .. 3073923 -  -4.1  -3.14931   GTGAGGCTCCAGTAA          GGGCGGGCC ACACGCG GGCCGGCGC          CGGATGAATGTTGCA  45 101
D558_RS15015 3073180 .. 3073216 -  -2.8  -3.75738   CACTACGACGAAGAA   CGTGACGGCCTGTCG GGCAAGTA CGCCCGGCCG-CGCG    GCTTGATGTTGCTGG  54 410
D558_RS15000 NONE
D558_RS14995 NONE
D558_RS14990 3070775 .. 3070791 - -10.9    -2.954   CAGGGATGGACAAAT              CGTAAGC AGC GCTTACG              GCGAGGTAGCTGGCT  68 379
D558_RS14985 3069016 .. 3069026 -  -6.8  -2.89564   CGGCCAGGCGACACA                 CGAG GCA CTCG                 GCTCTTTAGCAGTCA  49 416
D558_RS14970 3065662 .. 3065708 - -12.7  -2.85999   CGATGGGACAGTAGA CCTTCGGCCGCGGGGTCGCGC CACGC GCGCGGCCCCGCGCCCGCCAC CGGCCTCAGGCCGCC  73 31
D558_RS14935 3057507 .. 3057524 -  -4.9  -3.03439   AAGATCGAAACTATA             CACCAAA TTTT TTTGATG              CGGCCAGGCCGATTT  47 40
D558_RS14930 3057355 .. 3057398 - -19.2  -2.83899   AACCTGCCATCAAAT GCAAAACAAGGCACTACATC GCTA AATGTAGTGCCTTGTTTTGA CCGGGAATTTTGGTG 100 36
D558_RS14920 NONE
D558_RS14915 3054199 .. 3054209 -  -3.2  -4.05004   GCAGGAGAACAACAA                 GCTC AAG AAGC                 TGTTGGCCGAGTCGA  58 238
D558_RS14880 NONE
        dapD NONE
D558_RS14870 NONE
D558_RS14865 NONE
D558_RS14860 3045227 .. 3045250 - -13.9  -3.33696   GCGTGGCGGAACTAA          GCTGCCGTG GCGGGA CACGGCAGC           TTGGTAGCCGCTGGC  83 65
D558_RS14855 3042653 .. 3042663 -  -5.4  -2.77344   GCAGTCCTCAATAAC                 GGTA CGC TACC                 TGTAGCCAGATCTCG  47 7
D558_RS14830 3036832 .. 3036845 -  -5.2  -4.63218   GTTGCCGGAAGAAAA               CGGC GATCAG GCCG                ACCGCTTCCTGGCCG  77 299
D558_RS14815 NONE
D558_RS14810 NONE
D558_RS14805 3030484 .. 3030498 -  -4.2  -3.25823   TGCGGGCGAGATCAA               GCATGG TGG CTATGC               GGCGCAGGCGCCGCT  47 75
D558_RS14800 3028889 .. 3028913 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 388
D558_RS14775 3026554 .. 3026596 -  -4.7  -2.79831   TCAACCCGCACTACA CGACTGCCCATC-CGCCCGG CCAT CTGGGCGAGACGCGCGATCA GCGCATTGCCGAATT  45 222
D558_RS14765 3024567 .. 3024587 -  -4.5  -2.90212   CCACCAGGTGACACA            GGTGCTGGC AAC GCCTACGCC            GTTGAATATTCTTTT  43 264
D558_RS14750 NONE
D558_RS14745 3022737 .. 3022763 -  -6.5  -4.34557   AATGTAAAAAGTAAA         GACGCAAGCCT AACAG AGGCTCACGGC         TTCGGAGGCAGGTTC  72 19
D558_RS14740 3022237 .. 3022259 - -11.3  -3.28712   TCGGCGGCTGGAGAA          GGGGCAG-GC TGCG GCGCTGCCCC           TTGGCATCAGGCGCG  71 32
D558_RS14705 3016194 .. 3016232 -  -6.6  -3.05596   CAGGTTTTGACCCAA  TCCGGCGCCAGTGGCGA TCTCGG CCACC-CAGGTGCCGGA   TCGTAGGCCCTATCG  52 60
D558_RS14700 3015921 .. 3015935 -    -7  -3.14132   GGCTTCCGTGATCAA               CCGGGC CTT GCCCGT               GGACCTGGATCACCT  51 101
D558_RS14665 3008047 .. 3008072 -  -4.5  -2.87132   CCTTGCCGGCAGACA         GCCTGGCCCGC GCAT GCGCCCAAGGC          AGTTTGCACCGTAAT  43 482
D558_RS14655 NONE
D558_RS14645 3003912 .. 3003961 -  -3.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TATG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  52 383
D558_RS14640 3003588 .. 3003599 -  -4.4  -3.06831   TTAATTGTGAGGCAA                CTAG GTGT CTAG                 GAAACCCGGGGCGAT  47 22
D558_RS14635 NONE
D558_RS14630 3001987 .. 3002012 -  -9.7  -4.08945   AGCACTGCCGCAAAA         GCCGCGTGAGTC TTC GACTT-CGCGGC         TTTTTTGTTTTCTTG  78 405
D558_RS14575 NONE
D558_RS14570 2989917 .. 2989965 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS14565 NONE
D558_RS14560 NONE
D558_RS14555 2988682 .. 2988704 -  -7.6  -2.85351   TGCTCGGACATGAGA           TTGCCCACGC GCT GCGCGAGCAT           GCTCGTGAGCGGGTG  52 420
D558_RS14535 2982634 .. 2982644 -    -4  -2.91144   TCATGGCTGAAATGA                 TTCA GCC TGAA                 AATCCTGCCAAGTTC  43 168
D558_RS14515 NONE
D558_RS14510 2978014 .. 2978046 - -11.4  -4.07568   CCGTCTGGCTCAAAA     TGAC-CCAGGCCTCA TTTA TGAGGCCTGGCGTAA      TTTGCAGGCGGCAGC  81 135
D558_RS14500 NONE
D558_RS14495 2974709 .. 2974731 -  -4.9  -3.14881   CAATTGCGCGAGGAA          GCCT-TTCAG CGCG CCGAAGAGGC           AGCCATGCGTGCACC  47 395
D558_RS14420 NONE
D558_RS14415 2960201 .. 2960211 -  -6.8  -3.54424   TTGCACTTGCCGAAA                 CTGC TCA GCAG                 GCCGTCGAGCTCGAG  57 187
D558_RS14340 2946862 .. 2946884 - -16.3  -3.53012   GGCGGGCCCGCTAAA           CCCGCACCG GTTGG CGGTGCGGG           TTTTTTCTTGGTTCA  90 38
D558_RS14330 2943266 .. 2943284 -  -4.4  -3.78067   AAGAGTTAAGGCAAA             GCGGGGTC GAG GACGCCGA             TGTCGCGGAGTTACG  56 225
D558_RS14315 NONE
D558_RS14310 NONE
D558_RS14305 2937362 .. 2937376 -  -7.1  -5.75342   CTGGCCGAAAAAAAA               GCTCC GCACG GGAGC               TTTTGAAAGGCCCGA 100 77
D558_RS14295 2935618 .. 2935641 - -12.4  -3.40175   ACGCCCTAAAACACA          TGGGCCCGGT ATAT ACCGGGCGCA           ATCGCGTGGTGCTAC  76 69
D558_RS14260 NONE
D558_RS14255 2930341 .. 2930365 -  -2.9  -4.25104   TCTGCCGCAGCAAAA          GTTATCCAC TGGTTTT GTGGATAAG          CCTTGGGATAGGTGG  60 89
D558_RS14245 2929288 .. 2929302 -  -7.1   -2.9294   GAGATGATCGAGACA               CCACC TCACC GGTGG               CCATGGCCGAAAATC  50 368
D558_RS14215 NONE
D558_RS14210 2924436 .. 2924462 -  -4.5  -3.55203   AAAACGGCGTGGAAA        TCGACTTCAGCCG GCC CGGC--AAGCCGA        CGGACAATGCGCAGT  51 254
D558_RS14165 NONE
D558_RS14135 2907733 .. 2907748 - -10.4   -5.7946   GCGGGAATAAAAAAA              GGAGCC TGGC GGCTCC               TTTGAGTACGGCAAG 100 64
D558_RS14110 2902997 .. 2903012 -  -3.2  -2.92175   GCGTAACAGACCATA              GCCC TGGCTTGC GGGC               GCGTCCAATCAGAAA  42 68
D558_RS14105 2901593 .. 2901618 - -14.7  -2.69057   GCGCAAAGAGAAGAG         GGCGCTGGCTC GCAC GAGCCAGCGCA          TGCCCCTGCCGGGGG  78 42
D558_RS14100 NONE
D558_RS14095 NONE
D558_RS14090 NONE
D558_RS14085 2897195 .. 2897221 - -12.9  -3.05384   CGTGTTGGCACGCAA         CGCCCCGCGCA AGCCG CGCGCGCGGCG         TTGACGCGTTCAGGG  76 35
D558_RS14060 2889790 .. 2889813 -   -11  -2.87553   GGAAAAACTCTAAAG          CTATCCGGGT CTGC ACCCGGATGG           GGCAGGCGGCGGCAT  68 63
D558_RS14005 2874386 .. 2874414 -  -6.6  -5.24531   ATTTGCCATAAAAAA        CCGGGGACGC ATTGGCGTG GCGCCCCCGT        TGCGCGAGCGTATAC  90 134
D558_RS13995 2873082 .. 2873098 - -10.8  -5.63103   TCGCAACCAAAAAAA              GGCCGC TTTCG GCGGCC              GTTGACGGGATGCGG 100 42
D558_RS13975 2868708 .. 2868722 -  -2.1  -3.19634   AGTTTAAATATAAAT              TG-GCG GCAA CGCTCA               GGCCTTGGCCTCAAG  44 23
D558_RS13970 2867424 .. 2867445 -   -13  -4.30448   AAAGCCAATGCAAAA           CCCCAGGC ACTCAG GCCTGGGG            TTGCGTCGTGCCAGT  93 52
D558_RS13965 NONE
D558_RS13960 2865451 .. 2865473 - -14.2  -3.28712   GTGGCTCGTCTATAA           CCAGCACGAC GAA ATCGTGCTGG           AACTCGAAGCCACCA  78 83
D558_RS13940 2860166 .. 2860189 - -11.7  -2.54098   GCGCGCAATGAATAG          GCAGCCCGC CAGCGT GCAGGCTGC           GCCCGGCAAGTAGAT  68 48
D558_RS13935 NONE
D558_RS13905 2852107 .. 2852121 -  -4.2  -3.35679   GGTGCGGAGCGACAA               TGCCGC GGT ACAGCA               TTTCTATCACGCCCT  49 117
D558_RS13895 NONE
D558_RS13890 NONE
D558_RS13885 2849067 .. 2849115 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS13880 NONE
D558_RS13875 2848588 .. 2848602 -  -5.6  -3.36289   CATGAGGGGAATGAA               GCTGGT GTG ACCTGC               CCCCAGATTTAGTAC  53 34
D558_RS13870 2847969 .. 2847991 - -13.4  -5.41143   GATCGCGCAAAAAAA           CGCCCGGC GCATGAG GCCGGGCG           AATCTTCAGGCGAGG 100 46
D558_RS13855 2846102 .. 2846134 - -11.2  -3.02144   GGACTTGCCGGAAGA     CGCAGCGGGTGGCGG TAAA CCGCAACCCGC-GAG      GCCTGGGGGAGAACG  69 227
D558_RS13850 2845582 .. 2845601 -  -5.7  -3.29511   GCGATTGCGCCAGAA            CAG-GCCG TGAAG CGGCGCTG            TTCCCGTTTCAGCGC  51 57
D558_RS13845 2844739 .. 2844749 -  -2.4  -3.63991   CATCACGCTCAAGAA                 CCGG CGT CAGG                 TCAACCCCGATCCGC  50 514
D558_RS13825 2841632 .. 2841644 -  -4.7  -3.01712   GGCTGGCCGGCAACA                GCGGC GTG GCCGT                TATTGCCGGGCTGCT  46 139
D558_RS13800 NONE
D558_RS13795 NONE
D558_RS13790 2837472 .. 2837507 -  -6.8  -3.01712   GGCTGGCGCCGAATA    CCGGGCAAACCGGATCA GGC TGA-CCGCCTCGGCCGG    CTGCGCCCCACGGCC  53 84
D558_RS13785 2834760 .. 2834779 -  -6.3  -2.79183   TTCAGCGGGATGACA            TCGGCGC TCTTGC GCGCCGG             CTTGTCTGCCGTTTT  49 314
D558_RS13780 NONE
D558_RS13775 NONE
D558_RS13770 2832346 .. 2832358 -  -3.3  -4.41548   CGAGACGTTAGAAAA                CGGCT TCG AGCTG                GCCTGATTGATTCAG  66 5
D558_RS13765 2831693 .. 2831705 -  -9.1  -3.03124   CGTCAGCGTCGAACA                GGCTG TCG CAGCC                ATCGAGCGGCATAGC  59 121
D558_RS13740 2824225 .. 2824243 - -12.4  -3.40522   ACGCTGTTACGACAA             CTGCGCCG CAG CGGCGCAA             TCGCGCTCGACGATA  73 446
D558_RS13715 2818611 .. 2818639 -  -3.9  -3.53012   TCCCTGCCGGGCAAA        GCGGTATCAAA GCAGTCG TTCGATACGGC        CGATGGCTTCCTGCA  51 3
D558_RS13705 2815985 .. 2815998 -  -2.3  -3.37612   CGTAACGGCAATCAA               GCACG GCTC CACGC                TATTCCGCGATGAAC  46 65
D558_RS13700 2814683 .. 2814700 -  -6.9  -5.86061   CTGCAGCAAAAAAAA             CGCAGCC TCCG GGCTGCT              TTTTTTTTGGTTCAT 100 37
D558_RS13675 2810412 .. 2810425 -  -2.3  -4.15222   ATCGCCGGCAAGAAA               GTCAC CGTG GTGCC                TATCCTGCGCGCCGG  58 443
D558_RS13660 NONE
D558_RS13655 NONE
D558_RS13650 2805830 .. 2805847 - -14.1  -3.41878   GGGTGGAACGGACAA             GGGCCCC TTGC GGGGCCC              TATGCGACTGTTACA  87 36
D558_RS13645 NONE
D558_RS13640 2802837 .. 2802874 - -16.4  -4.72272   TTTCGCCATGAAAAA   CACCCCAGAGGTCGGA TGGGTG TCCAACTTCTGGGGTG    CGGTTCCATCCTGCC 100 74
D558_RS13620 2800984 .. 2800998 -  -5.6  -4.42386   TGGCCACGCACAAAA               CGGGCA TCC TGCCGG               TCACCGTACAGGGCA  73 141
D558_RS13590 2794710 .. 2794722 -  -3.3   -3.5393   ACCATTTTTTTGAAA                CGTGC ATC GCAGG                GGTAATCAGGCCTTG  49 31
D558_RS13585 NONE
D558_RS13580 2794393 .. 2794412 -  -7.8  -3.23899   TTCTAACCAACTGAA            CTACCGCT CCGC AGCGGTTG             ACACCTTTCGGTATC  59 54
D558_RS13575 2794289 .. 2794313 - -17.9  -4.84529   GCAGAAAGCGAAAAA          GCCGCAAGGTC GAA GACCCTGCGGC          TTTTGGAATTTTTGG 100 38
D558_RS13570 NONE
D558_RS13565 NONE
D558_RS13545 2789417 .. 2789429 - -10.5  -3.41051   TGAGTTGGACCACAA                CGGCC TGC GGCCG                CTGCTCGACCCATTG  67 55
D558_RS13530 2787937 .. 2787955 -  -6.6  -3.33696   CCGGGCTCCAATGAA             TGCTGCCA GAG CGGCTGCA             TTCCCTGTGTCTATG  55 128
D558_RS13520 2787008 .. 2787045 -  -3.3   -3.6761   GCGCGTTAAGAAAGA   CGACCGGTGTCCTTGAT ATGG ATCCAGTATAGCGGCCG    GGGTGGGGGCGTCAA  52 93
D558_RS13515 2786374 .. 2786400 -  -4.2  -2.87132   GCTGGGTGGGACAGA         TGGCCCGGGGCT ATA AGGCCCAGGCTG         CCTCGCTGTATCTGC  43 353
D558_RS13505 2784267 .. 2784293 -  -2.9  -2.99433   CAAGGATACTAGATA         GCCGGGCCA CGTGGGCTT TAGCCTGGC         GTTGGGGCGAGTTCG  42 16
D558_RS13500 2783277 .. 2783289 -  -9.1  -4.37527   CGACAAGCATTAAAA                GCCTC CGC GAGGC                AGGTCAGGCAGGTGC  81 150
D558_RS13490 NONE
D558_RS13485 2778694 .. 2778720 -  -3.7  -2.91395   ATGGCTTTGAGAAAC         TGCAGATCATC CCGTT GATGATCATCA         CGCCGCTGACCTTCT  43 233
D558_RS13455 2773412 .. 2773425 -  -5.9  -4.15044   GTTTTTTGCAATAAA               GGCCC CACG GGACC                TTTATTCATTGGCGC  66 31
D558_RS13385 2757532 .. 2757546 -  -7.1  -2.57564   TCAGGCGGCCAGAAG               CAGCG TACGG CGCTG               GCGCGGGCACTGGCG  47 263
D558_RS13350 2751598 .. 2751621 - -11.1  -3.90112   GCGTCGTCAAGTAAA          CAAAGGCCT CGTCGC AGGCCTTTG           TTTACAAGATTATTG  81 35
D558_RS13310 2742987 .. 2743015 - -20.4  -4.12532   GCTGCCAGATAGAAA        CGCCTGAACCGG TATTG CCGGTTCAGGCG        TTTTTCATGGGCGCA 100 51
D558_RS13265 2731364 .. 2731391 -   -20  -2.75481   TGCGAACGCCAATGA        CAAAGGCCTGGC AGAT GCCAGGCCTTTG         CGAATTTGGTTGCGG 100 32
D558_RS13250 2728582 .. 2728600 -  -3.8  -3.35775   AGCATGGTGCAAAGA             CATGTCGA TCT CCGATATG             GCTTCTATCGTTGGA  49 121
D558_RS13245 2728183 .. 2728208 - -19.1  -2.71815   GAGCCAAAGAATTCA         GGGCCATCCAC TTAC GTGGATGGCCC          TTTTGGTTTTTGCCG 100 60
D558_RS13215 2724833 .. 2724843 -  -8.2  -3.35813   GTCTAGTCTAACGAA                 GCGC GCG GCGC                 CAGCCTAGAGCTGGC  61 30
D558_RS13210 2724146 .. 2724163 -  -9.1  -2.75844   TTCGGGATCGTAAAG             CGCCACT CGAA AGCGGCG              TATCAGCCCAGCTCG  58 28
D558_RS13205 NONE
       rpmE2 2722781 .. 2722796 - -10.4  -5.92337   ATAGAGGAAAAAAAA              GCAGCC CGCA GGCTGC               TTTTTGTCGCGCGAC 100 66
D558_RS13195 NONE
D558_RS13190 2719520 .. 2719547 - -11.9  -3.18582   CAGGGCAGTTACCAA        GGCGCGGCGGA TCTCGG CCCGGCGCGCC         TTGCTATTTCAGAGC  75 34
D558_RS13170 2715931 .. 2715957 -  -6.5  -3.01791   ACTCGGCGGCCAAGA         GCGCGCTGGTC GGCCT GACCAACACGT         GGGCGCTGGAGCTGG  50 206
D558_RS13155 NONE
D558_RS13150 2712457 .. 2712470 -  -4.5  -2.78384   CCGGCCCCGATGACA               GCGAC CTTC ATCGC                CCCAACCTGCGCACG  44 19
D558_RS13145 2710848 .. 2710860 -  -9.1  -2.77182   TCTGAGATTCAATGA                TGGCC ATT GGCCA                TGGGGGACGTTGGTC  56 313
D558_RS13130 2709408 .. 2709418 -  -2.4  -4.50193   ATCAATGAATGAAAA                 GCAG TGC CAGC                 ACGACAGGAATCACC  64 1
D558_RS13125 NONE
D558_RS13120 NONE
D558_RS13115 NONE
D558_RS13110 2705381 .. 2705410 -  -3.3  -3.87815   CCGTATGCCCAGAAA       GGCGCCGGCCATG CCTG CCTGGCCGTACCC        ACTCGTCGAACGGAG  55 323
D558_RS13100 NONE
D558_RS13095 NONE
D558_RS13090 2698301 .. 2698326 -  -3.9  -2.70932   GGCGCTGGCCAACGA         CCACGTCGAAGC CGA GCGCCG-CGTGA         GCCTGAGCGCCGTGC  42 487
D558_RS13075 2696086 .. 2696107 -  -2.2  -3.53811   CCCAGCTTTCGCAAA           GCCGAGGCC GAGCA GGCTT-GGC           GACGCATGCTGGACT  47 66
D558_RS13065 NONE
D558_RS13060 NONE
D558_RS13055 NONE
D558_RS13050 NONE
D558_RS13045 2691964 .. 2692005 - -11.6  -2.78596   CATGGTGGCAGGACA GGGCGGGCGC--CGTCGAAG TCGC CTTCGATGATGCGCCCGCCG CCTTTCTCAACCTGA  62 72
D558_RS13025 NONE
D558_RS13020 NONE
D558_RS13015 NONE
D558_RS13010 NONE
D558_RS13005 2683704 .. 2683716 -  -2.6  -2.52676   TAGGCTGGCAATGTA                GCCG GTTTT CAGC                CTTGCCGGGGCCGGG  38 47
D558_RS13000 2682818 .. 2682833 -  -5.4  -2.91395   AGCCCCTGCAGAAAT              GCGCGCA GCA TGCG-GC              TGTCTGGGTCGTAGA  48 78
D558_RS12995 2682342 .. 2682353 -  -7.2  -4.86731   GCGCTTCAAAGAAAA                GCCC TGGC GGGC                 CGTGGTGCAGGCGGG  86 240
D558_RS12980 NONE
D558_RS12975 2679943 .. 2679977 -   -12  -2.71712   GCGCCCTGTGCAAAC     GCTGCCGCGACGGC GAGATCA GCCGCGGCGGCTGC     TGGCGGTGATTCCGC  70 9
D558_RS12970 2678690 .. 2678725 -  -6.1  -3.06796   GCGCAGCGCAGCCAA   CTGGCGC-AGGCTGCCG ACAG CGGCGGCTTTGC-CCAG    CGTGCGGCAGTCGCA  49 474
D558_RS12940 2674061 .. 2674073 -  -4.7  -3.57263   ACGCTGACGCTCAAA                GCAGC ACG GCGGC                GACGATGAGCACGCC  53 8
D558_RS12925 2670434 .. 2670445 -  -3.6  -3.18582   GAGCCCATCGACGAA                CCCA TCGT CGGG                 CATGGCCCTTTCGTC  45 96
D558_RS12865 2661747 .. 2661766 -  -8.6  -2.73681   GACCGAGGCGAAGCA            CTGGCGTCT GCC AGACGCC-G            TGTTTTAGCCCGGCT  58 30
D558_RS12855 2660592 .. 2660614 - -16.3  -4.06055   AGGGCGGAAACGAAA           CTGCCCCGG ACACA CCGGGGCAG           TCGGGCAGTCAGACC 100 50
        fabG 2659596 .. 2659609 -  -5.2  -4.62069   TCGGTAGCCGAAAAA               GGCG ATGCCG CGCC                CGAGGCCGCCAAAAT  77 152
D558_RS12835 NONE
D558_RS12830 2655779 .. 2655791 -  -3.3    -3.727   TGCAGCATAGCCAAA                TCCCG GCA CGGCA                GGCGAGGGCGGGCCT  52 69
D558_RS12825 2655034 .. 2655049 -  -2.4  -3.14931   CTGATCTGCGACGAA              CCGACG TCCG CGCTGG               ATGTCTCGGTTCAGG  42 276
D558_RS12785 2643762 .. 2643774 -  -6.2  -3.08173   ACCAATCTCATCGAA                CGCC GACTT GGCG                CCGGCTGGCTGCACC  49 354
D558_RS12775 2641085 .. 2641116 - -27.4  -2.52464   TTCCTTCTGAATGGA      CACGCGCGGGGTGG ATCA CCACCCCGCGCGTG       GATCAGACAGCCAGA 100 43
        gabD 2639559 .. 2639579 - -15.4  -5.47218   GCCCAGGCAAAAAAA            CCGGCGCC ACGAA GGCGCCGG            CTCGATCTCAGGGCC 100 46
D558_RS12765 2638513 .. 2638543 - -13.3  -3.01712   TGCTGGCGCTTAAGA      TCCGCCAGC-CCTG TGAC CAGGTGCTGGCGGC       GCTGTTCAGCCAGCA  77 31
D558_RS12760 2637497 .. 2637531 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 239
D558_RS12745 NONE
D558_RS12740 NONE
D558_RS12735 NONE
D558_RS12730 NONE
D558_RS12725 2627741 .. 2627756 -  -4.6  -3.51032   ATGCGGCAATCAGAA              GCGGGT GGAA ACCTGC               AGACCGATGATATTG  53 4
D558_RS12720 NONE
D558_RS12715 NONE
D558_RS12710 NONE
D558_RS12705 NONE
D558_RS12700 2620835 .. 2620867 -  -5.6  -3.25823   GTGCGTGTAGACCAA     GCGAACCAG-TTG-CG GCA CGACAAGCCGGCCCGC     CGGGTGATCAAGTCC  51 453
D558_RS12690 NONE
D558_RS12685 2618505 .. 2618515 -  -2.4  -3.06696   CTCTGGCTCAACATA                 GGGC AGG GCGC                 CTTGGGCTTTACGTT  42 130
D558_RS12665 2614700 .. 2614716 -  -5.7   -5.0133   CAGGCGCGCAAAAAA              GGGCAGC TGG GCCGCAC              GGTAGTGCTCAAACT  87 266
D558_RS12655 2612898 .. 2612941 -   -21  -2.77895   GTGACGGTCAACAAG CAGGGTCTGGCCTCGGCCAC CGCG GTGGCCGAGGCCATCCGCTG TCAGATCCGCCAGGA 100 87
D558_RS12645 2611822 .. 2611849 -  -4.8  -3.14344   CATGCGCGCCATGAA        GGAGGCCATCACC TTT GGTG-TGCCGTCC        TGCGTTGCGTACATG  47 123
D558_RS12635 2609367 .. 2609394 - -14.9  -5.63103   TGGCAATCAAAAAAA        GGGACACTGCC GGTGAA GGCAGCGTCCC         TATCGTTTACGTGCC 100 54
D558_RS12630 2606405 .. 2606417 -  -4.8  -3.05384   CCCGTGGTGATCGAA                CTGC AAACG GCAG                CGGGGGCAATCGGCT  47 337
D558_RS12620 NONE
D558_RS12615 2604073 .. 2604089 -  -7.9  -2.74523   GTACCGCGAAGAGGA              GCGCGAG ATG CTCGGGC              TGTGTGCGGATCAGA  51 461
D558_RS12585 NONE
D558_RS12580 2598937 .. 2598950 -  -5.2  -3.06796   TGTCAGTCGATTCAA               CCCG GGCTTT CGGG                CGTGATGCCTCATCA  47 198
D558_RS12550 2596332 .. 2596350 - -10.3  -5.75945   ATCTGGCAAAAAAAA             TCCCGGT TATGC ACCGGGA             TTTTTTATGGCCGCT 100 41
D558_RS12535 2594582 .. 2594603 -  -4.3  -4.18018   CGGCGGTAGCTAAAA           CCCTGCAGG GACA CCTGCATCG            CCTGGATGGGGACGC  62 44
D558_RS12525 2593754 .. 2593768 -  -2.8  -3.57462   GATCCTACCCCGAAA               TGCC GCAAGAG GGCA               GCCCGATGCATCCAG  49 58
D558_RS12520 2593332 .. 2593351 -  -6.4  -2.62184   GCGTCTTGGACATTA            CTGCTGCCC GCA GGGC-GCAA            GATAATGCCATGAAC  48 97
D558_RS12515 2591042 .. 2591069 -  -9.8  -3.13867   GCATCGAGCAAGATA        CCCGCAAGTACGC GTT GCGCGC-TGCGGG        CGATGTCTATGTGCT  60 289
D558_RS18225 2583632 .. 2583642 -  -2.4  -3.17212   CCACTAGTGCAGTAA                 GGCG TCT CGCG                 TATCTGCTCGCTGAA  41 3
D558_RS18220 2582801 .. 2582820 -  -9.2  -3.14132   CCGGCTGCGCACTAA            GCCGTGCC TTGC GGCACTGC             GTTGCCGGATGGGTG  64 228
D558_RS12405 2572701 .. 2572719 - -13.2  -2.56596   TTTCGCATCAATGCA             GTGCGCAA GCT TTGCGCAC             CTTGCATGCGGCGAT  71 92
D558_RS12400 NONE
D558_RS12395 2570848 .. 2570873 - -19.1  -2.59431   GCTTTCGATAATGCA         CAACGGCGTCC CGGA GGACGCCGTTG          TGGTGTCATGGCAGC  95 66
D558_RS12330 2548213 .. 2548225 - -10.5  -3.93166   GTCCTAAAAAAGTAA                GGCCG TTG CGGCC                AGCATCCTGGCGGCT  77 57
D558_RS12320 2547333 .. 2547354 - -13.7  -4.54727   GCCGGCAAACGAAAA           GACGGAGCC CTAT GGCTCCGCC            TTCATAATATCGGCT 100 52
D558_RS12315 2546757 .. 2546777 - -15.5  -4.52589   CTCGGCCACAGAAAA            CAGGGGTTC GTT GAACCCCTG            TTTTTCAGCTGTCAT 100 47
D558_RS12300 NONE
D558_RS12295 2542613 .. 2542625 -  -4.7  -3.63569   GGAAGCCTTCAATAA                GTCGG CTG CCGGC                AACTTCGGTTCGGGT  55 378
D558_RS12280 NONE
D558_RS12275 2539454 .. 2539481 -  -2.6  -3.72576   TGCCGCTGCACGAAA        CGATGGAG-CACG TCG CGAGTCTTCACCG        GGCGGTCTGGGCAGC  51 20
D558_RS12270 2538440 .. 2538452 -  -4.7  -3.61267   AATTCTAAAGCAGAA                CGTGC TTA GCGCG                CGGGCAGGGCCTGCA  53 18
D558_RS12265 NONE
D558_RS12260 NONE
D558_RS12255 2536578 .. 2536602 -  -5.7  -3.46511   TCAGAGAAGTCAGAA         GCCCGGCCAGC GTTCG GC-GGC-GGGC         AAAGAAAACCGGCTG  53 74
D558_RS12250 2535756 .. 2535780 - -15.7  -2.78798   ATGCTTGAGTGAAAG          CGCGTGCCGGC CGT ACCGGCACGCA          GGACTGCCAGGCAGT  86 41
D558_RS12245 2534012 .. 2534027 -  -2.5  -3.53733   GTCAGGGCACAAACA              CGAGCC TGTGC GGC-CG              CCGCGGTGTTCTGCG  47 175
D558_RS12240 NONE
D558_RS12235 2531349 .. 2531364 -  -3.2  -2.52516   TTCGTCATGACCAAC              TCCTTG GGTT CATGGA               TCAGGCGTGCAGCAG  39 26
D558_RS12230 2530946 .. 2530960 -  -4.3  -3.42699   ATAAAAGGAAATATA               TCAAC AATAA GTTGA               ATGTTACTTCAAGGT  49 29
D558_RS12225 NONE
D558_RS12220 2528895 .. 2528943 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS12215 NONE
D558_RS12210 2528399 .. 2528413 -  -7.1  -3.30771   GGATAGCGGGTAGAA               GTCGC GCACG GCGAC               AAGCGCGCCTGACCT  56 51
D558_RS12205 2527900 .. 2527910 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  60 43
D558_RS12200 NONE
D558_RS12195 2526516 .. 2526551 -    -4   -3.0792   TAAGAGTTTACTGAA    TTCGGCAAAGTCAGATA TTG TATCAGGCTT-GCCGGA    TAATGCAAGTCCTTT  45 170
D558_RS12190 2526142 .. 2526159 - -11.3   -5.0916   CCGCCAATACAAAAA             GGATGCC GCGA GGCATCC              TTTTTTTTGCCGCAT 100 97
D558_RS12165 NONE
D558_RS12160 2520345 .. 2520359 -  -5.6  -2.57132   CTGGCCTGCGACAAG               GCCTTG GCT CATGGC               GTCGGGGCAGTGTCA  46 38
D558_RS12155 2519983 .. 2519997 -  -4.9   -3.1886   ACTGAACGTGACCAA               CGGGC ATCAG ACCCG               CTGACGGCATTCATA  49 67
D558_RS12140 2517743 .. 2517763 -  -3.1  -2.79133   CAATCCGTGAGCACA            TCCGGCGTG TTG CTCACCTGA            ATGCCGCGCGCCTGG  41 18
D558_RS12135 2517046 .. 2517074 -  -2.2  -3.92641   AACGCGAGGTATAAA        GGTCGACGAGGG GCAAG CCCCCGTCGGGG        CTTCGTTCGTACGAG  53 42
D558_RS12125 2515381 .. 2515409 -  -9.4  -2.89191   TCACAGGTCGATAGA        CGGCAGCCCGGC TCGTG GCCCGGCCGCCT        GTGATTATGCTTGGT  62 30
D558_RS12120 2514425 .. 2514439 -    -5  -3.06796   CGGTAGTTCAGCGAA               TTTCGC CCA GCAAAA               GGAACTCCATCAGAG  47 3
D558_RS12115 2512931 .. 2512948 -  -9.1  -6.22802   GTGGACAAAAAAAAA             CCTGGGC CAGG ACCCAGG              TTTGTACTGCAGCCG 100 47
D558_RS12035 2497193 .. 2497228 - -27.8  -4.35116   TAGGCGAGACCAAAA    CAAAACCCCGGCTCGC TTGG GCGAGCCGGGGTTTTG     AATTTCAACCAGGCA 100 103
D558_RS12025 2496272 .. 2496291 -  -5.7  -5.61596   ACGGGTATAAAAAAA            CCAACCT GATAAA AGGTCGG             GTTTTTTTAAAAGCG  93 42
D558_RS12015 NONE
D558_RS12010 2493277 .. 2493290 -  -8.1  -3.47804   AGAAGGCAGAAGGAA               GGCGT GCGG ACGCC                CCAAGAGTGGCAGTA  61 104
D558_RS12005 2491974 .. 2492009 - -21.9  -4.27316   TGCCTCAACGGAAAA    GCCCCGCCAGCCGGA TTGCAG TCCGGATGGCGGGGC     TGGTGCGCGGTGCCG 100 47
D558_RS12000 2489986 .. 2490001 -  -3.2  -4.13767   TGTTGCACGCCAAAA              CCATGG TCGT CGATGG               GGTCTGGTCCACCGT  60 248
D558_RS11980 NONE
D558_RS11975 NONE
D558_RS11970 2484422 .. 2484443 - -12.3  -5.13722   CGGAGCAAAACAAAA           GGCCCTCAC CGAA GTGAGAGCC            TTGATATTCCTTGGT 100 37
D558_RS11955 NONE
D558_RS11950 NONE
D558_RS11945 2481987 .. 2482003 -  -4.4  -4.11503   TTAAAGAAGAAAAGA             CGGCGCT TTTC AG-GCCG              TGGCTAGCAGAGCAG  64 98
D558_RS11940 NONE
D558_RS11920 2476771 .. 2476795 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 276
D558_RS11910 2475009 .. 2475036 -   -20  -4.07568   TCGCTTTGTGCAAAA        GCATAACGCCCC ATCC GGGGCGTTATGC         TTTTGGGCGAACAGG 100 47
D558_RS11895 2472311 .. 2472337 - -16.6  -4.82901   GCCGCTTGACAAAAA         GCCCCTGGCACA TTG TGTGGCAGGGGC         TTTGGGCTGTGGAGG 100 53
D558_RS11875 2468213 .. 2468228 -  -4.7  -3.05384   CGCGCGGGGACCGAA              GATCG TTTAGT CGATC               TTCACGTTGGCTTCT  47 16
D558_RS11870 2467205 .. 2467231 - -18.1  -5.71983   TGAACCATAAAAAAA         CCCCTGGGATC TTATG GATCCCAGGGG         TTGAACGGATGGCCG 100 86
D558_RS11860 NONE
D558_RS11855 NONE
D558_RS11850 2462434 .. 2462444 -  -4.6  -3.21099   CGGGGCCATGATCAA                 GGAC TAT GCCC                 ATCATCTGCGTCATG  49 495
D558_RS11830 NONE
D558_RS11825 2457744 .. 2457763 - -16.4  -3.90112   CGTGCGGCAAGCAAA            GGCGCCCC TCGA GGGGCGCC             TTTGCTTTGGATGGT 100 214
D558_RS11800 2451122 .. 2451145 - -12.4  -5.40072   CCGCCCCCAAAAAAA          TAACGGCGCC CTTG GGCGCCGTTT           CTCATTAAATAATAA 100 44
D558_RS11790 NONE
D558_RS11785 2446504 .. 2446542 - -24.7  -4.85129   AGCAGACATTAAAAA   CCCCGCCAGTGCCGGAT TATTG ATCCGGTACTGGCGGGG   GTTTTTTGATTCTGC 100 59
D558_RS11755 NONE
D558_RS11750 NONE
D558_RS11745 2438343 .. 2438362 -   -15  -5.31275   GGCCAGCATAAAAAA            GGCTCCGC CTAA GCGGAGCC             TTGCAGGGATTGGAC 100 46
D558_RS11740 2437219 .. 2437243 -  -4.9  -2.78266   AATGTAGGAACAGGA          CAGCGCGCCTA TTG TAGTCGGACTG          GATCCAGTTTTCTCG  44 63
D558_RS11735 2436179 .. 2436209 -   -27    -5.055   TCAAGGCTCAAAAAA       CCCCAGCCCTGGCA GCA TGCCAGGGCTGGGG       TTTTTTGACATTGCT 100 53
D558_RS11675 2426042 .. 2426052 -    -4  -2.53346   GCAGAAACGGAAGAG                 TTTG TTG CAAA                 AGCCTCTGATCATTG  41 35
D558_RS11670 2424845 .. 2424857 -  -4.8  -5.06414   TGGCGCGAAGAAAAA                TCGG ACTGG CCGA                TCCAAACCGTCGATT  83 69
D558_RS11665 2423494 .. 2423506 -  -3.3  -3.65656   TGATGACAGATATAA                GGCAC GCT GTGCG                CGGGGGGAAGCCGGC  52 130
D558_RS11660 2422376 .. 2422408 -  -5.6  -3.25823   GTGCGTGTAGACCAA     GCGAACCAG-TTG-CG GCA CGACAAGCCGGCCCGC     CGGGTGATCAAGTCC  51 464
D558_RS11640 2418597 .. 2418624 - -22.8  -3.34895   TCGAGTGTGAATGAA        GACAGGGCCGGC ATAT GCCGGCCCTGTC         TTTTGCGGATCCGTT 100 93
D558_RS11620 2415303 .. 2415320 - -14.1  -4.07568   GTTTCGCCGGTAAAA             CCGCCCG ACAA CGGGCGG              TTTTTTTTTGGTTCA 100 38
D558_RS11610 NONE
D558_RS11605 2411509 .. 2411542 - -10.9  -2.88663   ATCGAGCTGGATACA     GGGCACACCGGCTGG CTTG CCATCCGGCATGCCG      GGAATGGGACTGGAT  68 90
D558_RS11565 2400680 .. 2400694 -  -8.5  -3.17075   GCTGGCGCAAGCCAA               GCCGC ATGCG GCGGC               TTATGCCGATCTGAT  57 426
D558_RS11555 2395616 .. 2395636 -  -8.3  -3.01924   GATGCGGCGGCAATA            GACCCTG TTTCAGG CAGGGTC            TATTGCTTCGCTCAG  57 37
D558_RS11550 2395182 .. 2395216 - -14.3  -5.08824   TGGCCATGTAAAAAA     CCCCCGAAGGGTGGA TCTCG TCCAGCATTCGGGGG     TTTTTTACAGGGTGC 100 85
D558_RS11525 2389407 .. 2389429 -  -6.1  -2.71364   CCATCGTGCGAACCA           CGCGGCTGG GCATA CCGGCCGGG           CGTGACGAACATTTA  46 167
D558_RS11475 2379638 .. 2379660 - -13.4  -3.80014   AGATGCATGATGAAA           GTCCGGGCAA AAG TTGCCCGGTC           CGCCCCGCGGGCGGC  93 57
D558_RS11470 NONE
D558_RS11465 2377332 .. 2377363 -  -6.5  -2.87463   AAGGGTTGGTAGAGA      TCCGAGC-CAACCG TGGCG CGGTGGTGCGCGGA      CTGAACCGCCAGGAG  49 474
D558_RS11455 NONE
D558_RS11450 2374293 .. 2374316 - -19.6  -5.18726   GCCCCAGAACAAAAA          CGCCGCGCAG GAAT CTGCGCGGCG           TTTACACAGGGAACC 100 67
D558_RS11440 2371107 .. 2371135 -  -5.2  -3.87994   AGGCAGTCGGACAAA       CCATGTACGCCGC CGAT GCGGCG-ACTCAG        GCCTTGGGCATGACA  60 415
D558_RS11395 2363555 .. 2363578 - -11.7  -3.53012   GCTTGTCGGCGCAAA          CCGGCCAGGC GCTGG GCC-GGCCGG          TTCAGGCGAGGTGGA  72 129
D558_RS11380 NONE
D558_RS11375 2359916 .. 2359941 -  -9.6   -3.9009   AATGCAGGCCAGAAA         GGCCGCCGCG GGCAAG CGCGGCGAGC          TGGGCGAGTGCGGTC  75 113
D558_RS11370 2358520 .. 2358558 -  -2.9  -3.94812   GGGTATGGAAAAAGA  GCGTTA-TCCCGGGCGAG AGGG CCCGCCCGTGCTTGCCGC   CGTACTGATACCCAT  58 516
D558_RS11350 2354864 .. 2354879 -  -5.4  -3.35046   GCAGTTTCTTAAACA              TGTCCA TGGT CGGACA               CCCCACGCCGGGCAG  53 410
D558_RS11275 2337871 .. 2337893 - -14.2  -4.24204   CAGCGATAGCGAAAA           CGGTGAACCC TTC AGGTTCACCG           TTTTTTTCGGGTTTA 100 38
D558_RS11195 2320511 .. 2320531 - -18.3  -5.41746   AAGGGGCGAAAAAAA            GGGCCTCGC AAT GCGAGGCCC            TCATTGTAGCGGCTA 100 53
D558_RS11190 NONE
D558_RS11185 2318900 .. 2318921 -  -7.1  -3.08813   GGCCATGTGAACAGA           TCGGGTGGG TCAA CCCGCCCGC            GGGCCCAAGGGGGCC  54 193
D558_RS11180 2317307 .. 2317323 -  -3.5  -3.05384   TCGGCTGGCACGCAA              GCGGCGC CTG GTGCCGG              CCGATTTCGCCAACG  43 357
D558_RS11170 NONE
D558_RS11165 2313650 .. 2313671 - -10.2  -5.65513   GATGAACCAAAAAAA           TCCCAACC GGCAAA GGTTGGGA            TTTCTGAATTTGGTG 100 484
D558_RS11160 2312162 .. 2312186 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 180
D558_RS11145 2309830 .. 2309852 -  -5.4  -3.57615   GCAAGATGCTGGAAA           GCGGCCGTCC TTC GGACGACTGG           AACCAGTTGCTGACC  55 319
D558_RS11130 2308293 .. 2308306 -  -2.3  -4.58283   CAAGCGCGTCAAAAA               TGGCG TGTG CGTCA                GCAGCATCGCCGTGC  66 173
D558_RS11125 2306634 .. 2306653 - -11.4  -3.01924   CAGTTGGCTGCAATA            GCGGCC-GG GCG CCAGGCCGC            TATTGCCGCAGCCCG  69 58
D558_RS11110 2304412 .. 2304448 -    -8  -3.59627   ATGAAATCCTGCAAA   GCGAGC-CGCGCTATGGC AGA GCGATGGC-CGTGCTCGC   GGTGGACATCGACCA  63 441
D558_RS11085 2298688 .. 2298719 -  -8.6  -3.61089   GTGTAACAACGAGAA      CGAGGGCGGCGATG GTGA CATCGCCGAGGTCG       CATGACGGGGGCGCG  66 504
D558_RS11070 NONE
D558_RS11065 NONE
D558_RS11060 2290176 .. 2290219 -    -4   -4.2349   GTTTCAGAGGGAAAA TGCCGT-GG-AAATAGCCTG AGTTGG CAGGCTTTTTTCCCAGGGCA AAATTTATTTCGCTG  62 98
D558_RS11055 2289673 .. 2289684 -  -7.2  -3.55622   GGCAATGCCGCCAAA                GCCG AGCA CGGC                 AGCGATGATTGCAAT  60 128
D558_RS11045 NONE
D558_RS11040 2287779 .. 2287799 - -16.9  -5.86061   CGTGAGCAAAAAAAA            CCGGGCTCT GAC AGAGCCCGG            AAAATCCGGCGATCA 100 64
D558_RS10985 2277562 .. 2277585 - -15.4  -5.41746   AATGGCGGAAAAAAA          TAGGCTTGCC CATG GGCAAGCCTA           TTTGCTCAGGCGCTG 100 45
D558_RS10975 2272908 .. 2272926 - -11.7  -3.41602   TTGACGGCATGAGAA             GACCGCC CGAGT GGCGGTC             TTCTCATGGGTTTAA  76 37
D558_RS10910 2252838 .. 2252848 -  -6.8  -4.81083   GCTAACTATGAAAAA                 CCGT TGA ACGG                 GCGCAAGAACCCGTC  84 147
D558_RS10905 2250476 .. 2250495 - -12.1  -6.23209   TGAACCAAAAAAAAA            CCGGGGC AAGTAA GCCCCGG             TTTGCAGTAATGCGC 100 45
D558_RS10900 NONE
D558_RS10895 NONE
D558_RS10890 NONE
D558_RS10885 2245385 .. 2245401 -  -6.5  -3.01924   GAGCCTGGCGCAACA              GGCGC TTGGTGC GCGCC              TGCTGGTGCTGGAGC  50 234
D558_RS10850 2238447 .. 2238477 -  -5.3  -3.02144   TCACTGGCTGCAACA      GGCTCAGGGCAGCG GCAT CGCCGCCTTG-GCT       CACTTCGCGCTCAAG  46 242
D558_RS10805 2230336 .. 2230359 - -18.2   -3.5393   ATGAGCTCCTGGAAA          TTGGGCCCGC CGAA GCGGGCCCAA           CGGGAGCTGACTGAA 100 41
        prpB 2229258 .. 2229284 - -12.3  -3.92267   CAGACATAGACGAAA        CCGATCCGGTCC GATT GG-CCGGACCGG         TACGCTTTACTTCGT  83 32
D558_RS10795 2227983 .. 2228028 -  -5.1   -4.5464   GACATAGAAGCAAAA CCCCTATGTGTGGGCGGGGCC GGTC GGCCCCGCCGGGTCAGAGAGT TACTTGCGTTTTTCG  70 25
        prpD 2226486 .. 2226499 -  -5.2  -3.69618   CCTAATTCGAAAACA               CGCC ATTGTA GGCG                ACAGTGGCCCCGCTC  58 39
D558_RS10785 NONE
D558_RS10780 2224378 .. 2224393 -  -7.5  -2.74144   CGTTCACGTCTAAAG              CGGCG GATTTG CGCCG               TCGCGATAGCTGGCG  51 4
D558_RS10775 2223848 .. 2223865 -  -9.8  -5.96521   ATGAACCAAAAAAAA             CCCGCC GGTTAG GGCGGG              TCTTAAAAGGGGCTT 100 114
D558_RS10770 NONE
D558_RS10765 2222307 .. 2222355 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 116
D558_RS10760 NONE
D558_RS10755 NONE
D558_RS10750 2220965 .. 2220978 -  -2.3  -3.73756   CAGGCTATGAAAACA               GCCTC AGAT GACGC                CTGGATGAAAAAACA  51 53
D558_RS10745 2219930 .. 2219942 -  -3.3  -3.16039   AACGAGTGGCAGGAA                TGCTC CCT GAGCC                GCAGCGCTGGCAATT  43 168
D558_RS10740 NONE
D558_RS10735 NONE
D558_RS10730 2216653 .. 2216698 - -10.3  -5.14163   ATGCAGCAAGAAAAA CGGCCTGGTGACATG-GCCGCA GTA TGCGGCACCCCTAGCCAGGCCG TCGATTGTGGATGCT 100 46
D558_RS10725 2215753 .. 2215783 -  -9.8  -2.61274   GCGAGGTCAACGAAG      GCCT-GAGCG-CGC GTAAT GCGGCGCTCGAGGC      TGAAGTGCGGGATCT  55 252
D558_RS10640 2196871 .. 2196889 - -12.4  -5.75342   CTTCTCGAAAAAAAA             GCGCCTCG GTA CGAAGCGC             CTCAGGAGCGGCGTT 100 39
D558_RS10635 2195821 .. 2195849 - -13.2  -2.50988   GCAGAGCACCAATAT        GGTGTTCGTGAG TGTTG CTCCCGAACACC        GCAGCAGGCTCAACC  67 196
D558_RS10620 2192707 .. 2192727 -   -14  -4.03179   CAGAGCATAATGAAA            GCCTGCGC GCAAT GCGCAGGC            TTTTTTTTGGTTCAT  95 37
D558_RS10595 2185991 .. 2186007 - -15.1  -5.27335   TGTGCCAAATAAAAA              CGCCGGC AAG GCCGGCG              TCGGGTATCGGGGAC 100 50
D558_RS10565 2178917 .. 2178930 -  -2.3  -4.15833   ATCAGTAGCGGAAAA               CTGCC CTTT GGCAT                TGGGGTCTGGGTGAT  58 134
D558_RS10555 NONE
D558_RS10550 2175904 .. 2175921 -  -6.9  -2.70932   TGTGCCGCTTAAGCA             CCACGGC TCAG GTCGTGG              CTTTGTGGTTGATGT  51 1
D558_RS10545 2175625 .. 2175638 -  -3.7  -2.72511   TCCAGTCGGGGAAAT               CAGGG TCAG CCCGG                CCGAAGGCGCTGCAT  43 17
D558_RS10540 2174771 .. 2174786 - -10.4  -5.93809   CGGGCAGAAAAAAAA              CCGCCT GCGT AGGCGG               GTTTGGGCCGGTTTT 100 66
D558_RS10535 NONE
D558_RS10530 2171707 .. 2171759 -    -2  -4.13767   CGGGCGAGGTCAAAA CATTGATGCG-CGCC--GAGGTCGC CGGGAT GCACCCGCTGGGCGGCGCATCACTG ATGTCCGCCTGGTAT  58 363
D558_RS10410 NONE
D558_RS10405 NONE
D558_RS10400 2150593 .. 2150619 -  -2.2  -3.29144   TTATTGGTGGCACAA         GGCTGGCAAGAA CGA TTTTCGCGAACC         GTTGATCTACGGGGC  44 100
D558_RS10375 2143684 .. 2143704 - -12.5  -6.02914   GGGATACAAAAAAAA            CTGCCAGGC TTG GCCTGGCGG            TTTCTATGTGCGCTT 100 44
D558_RS10330 2135780 .. 2135792 -  -6.2  -4.59109   GACAGCCTGCAAAAA                GCGC TGGAT GCGC                TGCGCGAAGTCTCCG  79 86
D558_RS10320 2132374 .. 2132390 -  -3.5  -4.52589   CGGGTGCACAGAAAA              GGAAGCC ATC GGCGGCC              AGCAGGTCGCAACTT  66 186
D558_RS10315 2131894 .. 2131906 -  -9.1   -3.7282   CGATGGCATGAATAA                GGCGT GGG ACGCC                TGGGTGCCGGCAGGC  71 158
D558_RS10300 NONE
D558_RS10295 2129097 .. 2129122 -  -4.7  -4.56597   TTTTGTTGTGAAAAA         GCACCGGTGA CGCGATC TC-CCGGCGC         ATTCACCAGTAATTT  72 28
D558_RS10290 2127723 .. 2127739 - -15.1  -3.91402   GCATACAAAGTGAAA              CGGGCCC CAC GGGCCCG              TCGGAGGTGCGGTGC 100 48
D558_RS10285 NONE
D558_RS10280 NONE
D558_RS10275 2125476 .. 2125524 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS10270 NONE
D558_RS10265 NONE
D558_RS10260 2123929 .. 2123943 -  -3.4  -2.87132   GTCCTCGCGCACATA               GCCGCC ATG GGCGAA               GAAGTCATCGATCTT  42 53
D558_RS10255 NONE
D558_RS10250 2121754 .. 2121782 -  -9.4  -2.62463   GCCAGGATGCACAAG        GTCCGCCGCCAG GCTGG CAGGCGACGGGC        GCGCGGAGGGCTTCC  60 46
D558_RS10245 2120707 .. 2120739 - -17.1  -2.87881   CAACCGGCGCACACA      CGCAGTATGCCGCCT GGC AGCCAGCATACTGCG      TCCGGACAGCCTACT  88 100
D558_RS10240 2118426 .. 2118436 -  -2.4  -4.63218   GCTGGTCGAACAAAA                 CGCC CGC GCCG                 CTTTGCAGGTCGCGG  70 162
D558_RS10200 NONE
D558_RS10195 2110541 .. 2110565 -  -7.8  -2.60212   TTAGGACGCGATAAT         GCCCGGCGCCC CCTT GAGCGCCAG-C          GTGGCCGGCGTACAA  53 138
D558_RS10190 2109539 .. 2109557 - -11.7  -6.15828   GGCACGAAAAAAAAA             CCGCCAG ATGAA CTGGCGG             GTTTCTGGCGGGGTG 100 47
D558_RS10185 NONE
D558_RS10180 NONE
D558_RS10175 2106605 .. 2106629 -  -4.9  -3.02511   GGCACTTTGGCAACA          TCTCCCGCATC ATG GATGCCGACGA          GGAAGCCTTGCTGGC  46 406
D558_RS10155 2098379 .. 2098390 -  -2.2  -3.75153   GCCGGGCAACCGAAA                TCCA AAAC CGGA                 AGAAATTGCAGCTTG  53 310
D558_RS10135 NONE
D558_RS10130 NONE
D558_RS10125 2092567 .. 2092585 - -13.1  -4.71426   TCTGGAGGAAGAAAA             GGCCCGG ACGAG CCGGGCC             CAAGGCATTACAGCG 100 33
D558_RS10120 2091978 .. 2091995 - -12.7  -5.96521   ATGAACCAAAAAAAA             CCGGCTC TGCT GAGCCGG              TCGTGCCTTGTTGCA 100 48
D558_RS10115 2091179 .. 2091192 -  -2.3  -3.04792   CCACGACGTGGAACA               GGTCG TAGA CGATC                TCGGCGTTGGGGCAG  41 13
D558_RS10110 2090464 .. 2090494 -    -6  -3.09878   CGCAGGCACCCAAGA       TCGGCCCGCATGCC GCG GCCATGGCGGCCAA       CGTCGCCGAGGACCT  49 197
D558_RS10095 NONE
D558_RS10090 2085011 .. 2085025 - -11.4  -5.40072   GCCGGCGTAAAAAAA               CCTCCC GTT GGGAGG               TTTTTTTTGATGTGC 100 66
D558_RS10005 NONE
D558_RS10000 NONE
D558_RS09995 NONE
D558_RS09970 NONE
D558_RS09965 NONE
D558_RS09960 2060799 .. 2060833 -  -7.1   -2.9183   AAAAATGCGTACAGA    GGTCATGCGCGCGGTGA ATT TCTCCGCGCGT-TG-CC    GTCTGCCCTGACCAG  53 43
D558_RS09935 NONE
D558_RS09930 2055349 .. 2055363 -  -2.7  -2.83403   GTCGGGTGAGCAAAT               CGAGC TATCG GCGCG               CATGATCAGTCTGGC  40 245
D558_RS09920 2054306 .. 2054318 -  -6.3  -3.54424   CGGGAGTTTGGCAAA                TGAAC CGC GTTCA                GTCGCGTGCATGCCG  58 161
D558_RS09870 2042463 .. 2042480 -  -2.6  -2.82516   TTGCCGACGATGACA             CCGTGG CGGCGC CCACGC              TCAGCACACTGACGT  40 297
D558_RS09850 2037055 .. 2037070 - -10.4  -3.20723   CCGTCACGAATGGAA              GCTGGC CTGA GCCAGC               AGGCAGTTCTAATTC  68 362
D558_RS09765 2016123 .. 2016136 -  -6.7   -3.1505   ACGATTCCGCAGGAA               TTGCC TTAT GGCAA                TTCCTCGATCGTACC  51 121
D558_RS09750 2013306 .. 2013322 - -10.8  -4.36914   TCTCGTTGCAGAAAA              GCCGGC TTGCT GCCGGC              TTTTTTGCATTCTGC  85 207
D558_RS09695 2003386 .. 2003407 - -14.5  -5.03314   CGGATGCCTAAAAAA           CAAAGCCCC AATC GGGGCTTTG            TTTTTTCTCGGCCGT 100 48
D558_RS09680 2000983 .. 2001020 -  -9.2  -2.74563   GGTAGAGGGCAATGA  CCAGGCCGCGACGGGCAA GCGC TTGACCGCCGCG-C-TGG   ATGAGGTCGTCAAGC  56 491
D558_RS09660 NONE
D558_RS09655 1997177 .. 1997194 - -14.1  -5.96521   ATGAACCAAAAAAAA             CCGGGCC CAAG GGCCCGG              TTGACGTTGCTCGCA 100 51
D558_RS09645 1994795 .. 1994813 - -11.7  -6.23209   TGAACCAAAAAAAAA             CGAGGGC TTGCT GCCCTCG             TCGTGGTCATCGCTT 100 52
D558_RS09630 1992395 .. 1992408 -  -2.3  -3.37612   CGTAACGGCAATCAA               GCACG GCTC CACGC                TATTCCGCGATGAAC  46 56
D558_RS09625 1991041 .. 1991052 -  -7.2  -4.66833   GCGCAACCGCAAAAA                GCCG CAAA CGGC                 TCAAACAGCGGCCTG  79 95
D558_RS09595 1984279 .. 1984300 - -13.7  -3.60098   ACGGCCTAGGGGAAA           CCCGGGTCA ATGA CGACCCGGG            GCGGAGTCTACAGCG  83 33
D558_RS09590 NONE
D558_RS09585 NONE
D558_RS09580 NONE
D558_RS09575 NONE
D558_RS09570 NONE
D558_RS09565 1979821 .. 1979850 - -21.5  -4.98531   CTCTTAAAGCAAAAA       CGCCGGGACGGTC GGCA GACCGTCCCGACG        CATGTGGGGCACTTG 100 55
D558_RS09560 1979063 .. 1979082 - -16.4  -4.20806   CACCTGAAAAGCAAA            CGGCGGCC AGCC GGCCGCCG             CTATGCCACGCGCTG 100 46
D558_RS09545 1976586 .. 1976608 -    -9  -3.01712   CGGGCGCGGCTAAGA           CGCTGGGCAG TAC CTGCCGCGCG           CCGTGGCTCAGGCCA  59 33
D558_RS09515 NONE
D558_RS09510 1969157 .. 1969169 -  -3.3   -2.9155   TGGTGCAAGATCAGA                CCTCC CGG GGATG                ATCCGGTTCCCCATC  42 45
D558_RS09505 NONE
D558_RS09485 1963240 .. 1963250 -  -6.8  -3.31792   GCAGGACGTCGATAA                 TGCC TAT GGCA                 TGCGGCGCGGGCTGG  55 459
D558_RS09455 1955619 .. 1955638 - -10.7   -4.6856   CAAACACCTGAAAAA            GCCCGCT CTTGGC AGCGGGC             TTTTTCTTGGTTCAT  90 37
D558_RS09435 1950133 .. 1950160 -  -9.8  -3.53012   TGGCCGTGCCCGAAA        CGGCGCTGGCGCC GGT GG-GCCAGAGCCA        ATATGTCTATCGTGT  65 382
D558_RS09410 NONE
D558_RS09405 NONE
D558_RS09400 1944715 .. 1944729 -  -8.5   -5.7946   TGGTCAATAAAAAAA               GGCGC ACGAG GCGCC               TTCGGTTGGGATAGA 100 47
D558_RS09395 1944222 .. 1944238 -  -2.1  -2.92444   ATATCGAAAAAAATT              CCCAAGG GCG CCGCGAG              GCGCGATCCAGAAAA  40 43
D558_RS09390 NONE
D558_RS09385 1941168 .. 1941188 -  -8.9  -2.62184   CGCCCCCGCAGATCA            TCGCGCGGT TGA ACCACGCGC            TGACCACCATTATGA  53 184
D558_RS09365 1937722 .. 1937732 -  -8.2  -3.28712   GCTGTCCCCGCAGAA                 CGCC ATT GGCG                 CTTGCTGGAAGACGG  59 334
D558_RS09350 1933561 .. 1933576 -  -3.2  -4.13767   CGCCGCATCCGAAAA              TCAGGT TTCA ACCAGA               TGAACGCCTGGTGGC  60 10
D558_RS09345 1932731 .. 1932745 - -11.4  -2.71924   GAGCGCGCGGTAAAG               CAGGGC CTG GCCCTG               GCGCGCAAGCTCGAT  62 400
D558_RS09335 1930673 .. 1930683 -  -2.4  -3.05384   TTTGGCTGGACGGAA                 CTGC CGC GCTG                 GATGGTGCAGCGTTT  42 222
D558_RS09325 1929408 .. 1929427 -  -4.3  -4.10453   GAAACTGCGCGAAAA            GCGTCAGC GTCTG GCTGAC-C            GTCACCCGCATCTGG  62 55
D558_RS09300 1925543 .. 1925558 -    -4  -3.31144   TCTGGACCGCTACAA              GTATCCG GTG CGG-TAC              GAAGGCGTCGATCCG  49 506
D558_RS09270 1921724 .. 1921735 -  -7.2  -3.81951   TGCGACATCAGCAAA                GCCG CGGC CGGC                 CCCTGGAAAGCGGCG  64 147
D558_RS09240 NONE
D558_RS09235 1912883 .. 1912893 -  -8.2  -2.85668   GAGGGCGACACCATA                 CGGC GGC GCCG                 GCGCTGCCTGTCCTG  55 430
D558_RS09210 NONE
D558_RS09205 1906238 .. 1906272 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
D558_RS09165 NONE
D558_RS09160 1898570 .. 1898585 -  -4.6  -4.21194   CGCCATGACCGAAAA              CAGCCG CCGT CGCCTG               GCCCAGGGCGGGCTG  68 383
D558_RS09135 NONE
D558_RS09130 NONE
D558_RS09125 NONE
D558_RS09120 NONE
D558_RS09115 1887659 .. 1887675 -    -3  -4.30576   CGTGGATGAGGAAAA             TGCC-TG GATC CATGGCA              GCGTCCGGGTCAGAG  64 35
D558_RS09110 1886917 .. 1886927 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  60 137
D558_RS09105 1885887 .. 1885910 -  -2.2  -3.01924   CAGGCCGGTGTAATA          GTCGCCGCCC ACAA AGGCGAAGGC           GGCTAGGTGTGAACT  41 28
D558_RS09100 NONE
D558_RS09095 NONE
D558_RS09090 1883516 .. 1883528 -  -6.2  -3.74872   ACGGAGCGGATTAAA                CGCC CAGAT GGCG                GGTGAGCAGGTGGGG  61 8
D558_RS09080 1879284 .. 1879315 -  -2.2   -3.2614   GACCTTGCAGACCAA      TGCCACGCAGAT-GG TGC CCGATGTCCGGGGCA      CGGCAGTGGCGTGGT  44 199
D558_RS09055 1874463 .. 1874473 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  60 63
D558_RS09050 NONE
D558_RS09045 1872313 .. 1872348 - -13.9  -3.73224   TTAGTTGTTACGAAA    TGCGAAGGGCGCGCC GATCAA GGCGCGCCCGCCGAA     GTGAGTGCTCAGCGT  88 47
D558_RS09040 NONE
D558_RS09035 1867766 .. 1867817 -   -16  -2.83677   AATGAATTCAGCACA GCCATTTGATATGGCCCCCGCC ATAAGCGG AGCGCGAGCCATTTCAAATGGC ATCGGTAGGCGCCAG  86 128
D558_RS09030 1867127 .. 1867150 - -19.6  -4.72272   TCGGCGCATGAAAAA          GCCGCCCGAC TTTC GTCGGGCGGC           TTGATGCCTGCCTCA 100 55
D558_RS09025 1866414 .. 1866439 - -17.6  -5.24129   GTTGTCGATAAAAAA         GGGCGCCGTG CGAATC CACGGCGCCC          TTGTTTCGTGTCCGT 100 48
D558_RS08960 NONE
D558_RS08955 1853154 .. 1853164 -  -2.4  -2.73275   CACGTACATATATCA                 GTCC ATC GGGC                 CAGGCGCTGCCGGGC  39 56
D558_RS08950 NONE
D558_RS08945 NONE
        aroE NONE
D558_RS08935 1848725 .. 1848738 -  -3.7   -2.8136   AACTTTAACAAATAT               GAGGC CAGC GCCGC                CCGTTGGGTGTTACG  43 36
D558_RS08930 1847491 .. 1847508 -  -4.8  -2.71924   GAGTCTTCGTGAAAG             GGCTGC TCTCAG GCAACC              TTGCGTTGTTGTCTG  44 16
D558_RS08925 1846419 .. 1846436 -  -6.2  -3.62096   CTGCATCACGGCAAA             CGCAGC GGTTTT GCCGCG              TTCGTCGGCGAAGAG  57 204
D558_RS08900 1843621 .. 1843631 -  -4.6  -3.45817   TGGCGAGAAGAAAAT                 CGGC GTC GCCA                 TCGGTAACACCCTGA  53 360
D558_RS08885 NONE
D558_RS08880 NONE
D558_RS08875 1839812 .. 1839835 - -11.6  -5.65513   GATGAACCAAAAAAA          TGCCCCCGGC AGCA GCCGAGGGCG           GGAGGTGAGGCGGGG 100 45
D558_RS08865 1836430 .. 1836455 - -10.3   -2.5294   GACGCTGGAGAATAT         CGTCGCCATCC TGCA GGAAGGCGGCG          CCGGTCAGCAACACA  58 222
D558_RS08805 1823707 .. 1823717 -  -4.6  -3.28712   CTGGGGGTTTGAGAA                 CGGA TGA CCCG                 GTGGGCGAAAAAATC  49 176
D558_RS08775 1817983 .. 1818010 -  -2.6  -2.64155   CTCGGCGGAAAGTCA        GAGTTCTGCTGGC TAT GCACGCAGA-CCC        ATCTGCTCAAGCACG  38 10
D558_RS08770 NONE
D558_RS08765 1816412 .. 1816433 -  -2.8  -3.02511   CCCATCGCTGGAAGA           CGGGGGCC GTCAGG GGCCTACG            CGCATGCTGGCGACA  43 13
        argJ 1815073 .. 1815087 -  -7.8  -3.29511   GCGACGCGCGCAGAA               CAGGCT TGG AGCCCG               TTCTGCGCAAGCGGA  59 41
D558_RS08755 NONE
D558_RS08750 1813093 .. 1813121 -  -7.4  -2.53876   CGCGACCTCAAGGGA       GGCCGC-CCCG TGTCGAAT CGGACGCGGCC        GCGTCAGCCTAGCAA  50 29
D558_RS08745 1812173 .. 1812188 -  -2.5  -2.80816   TCGCGAGTGACCAGA              TGCAG ATTTCA CCGCA               GCGTGGCTTCGGAAG  39 125
D558_RS08740 1811488 .. 1811506 - -11.6  -3.06183   CTGACGCCGACCGAA             TCCGGCCC GCC GGGCCGGC             CCTGAAGTCGCTGTC  69 39
D558_RS08700 1798965 .. 1799001 -  -8.6  -4.07687   AGCGCTGTCGCAAAA   CCGCTCGGGCC-TCGGA ACAA TCAGATGGCCCGGGCCG    GGCACTGCTGACACA  75 322
D558_RS08680 NONE
        glpK 1794346 .. 1794380 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 206
D558_RS08665 1792756 .. 1792772 -  -3.5  -2.70932   GGCGCGCTGGAATCA              TCGGCTG GTG CTGCCGG              CCATGGCGCTGACCT  40 286
D558_RS08630 1786326 .. 1786340 -  -4.2  -2.70932   GTGCTGCCGCAACCA               GGCC TTCATGC GGCC               TCTCCTTGGGAGTCG  43 16
D558_RS08625 1785368 .. 1785402 - -22.3  -3.32997   GGGCCACAAAGCGAA    GCGCCCGTTCAGGCAC TGTA GTGCC-GAACGGGCGC     GGGCTTTTCGGGGAT 100 49
D558_RS08620 1784055 .. 1784069 -    -7  -3.87815   GGGCATTTGCAGAAA               CGGGCC TAC GGCCCC               GGCATGTTGCGGGTT  64 513
D558_RS08610 1779469 .. 1779488 -  -2.8  -3.21099   CTGCGCTATCAGCAA            GTCACC TTCCGCCT GGCGAC             CCATCCCGAACTCAA  45 89
D558_RS08600 1777824 .. 1777870 - -15.2  -2.52795   AACCTGGGCAATTGA GACG-GCGGTATTGCCGCGGC TGACGG GCCGCAGCAATACCGTGCGGC GCGTGGCCTCAGGGC  81 34
D558_RS08590 NONE
D558_RS18170 1772444 .. 1772457 -  -4.5  -3.07291   AAGGATGGCACTGAA               CAAGC TCGG GCTCG                CAGGGGGAAGAGGCG  47 63
D558_RS08585 1771538 .. 1771551 -  -8.1  -4.05446   TGCCCCAATGATAAA               GCACC GCCC GGTGC                TCCCCCAAGACAGAG  71 48
D558_RS08580 NONE
D558_RS08575 1769790 .. 1769836 -  -2.9  -3.39142   TGGACAGTGAACTAA TGGCTCATTGTACCGGCTCCCCG GGG CGGGG-GCCGGCAGTGTTA-CCA CCAGGCGTGGAAGTG  47 20
D558_RS08570 NONE
D558_RS08565 1767435 .. 1767446 -  -5.8  -3.01712   TCGTGGCCGTCAACA                CCGA CTCG TCGG                 TGCGGCGGTTGGGTA  48 328
D558_RS08475 1752620 .. 1752634 -  -5.6  -3.55622   TGGAACCTCTTCAAA               CCCACC AGT GGCGGA               TGGTTGCTGGCCGGC  55 132
D558_RS08455 NONE
D558_RS08450 1747413 .. 1747434 -  -3.5  -2.72166   GCCGTAAGGAAAGAG           TGGCCCGGG GTGT CCCGGAGCG            GTGCCAGTGGGCACC  41 154
D558_RS08445 1745853 .. 1745864 -  -5.8  -3.27525   CTGCTCGAAACCGAA                CCGT TCAT ACGG                 TATGAGCGCTCATCG  51 351
D558_RS08435 1744699 .. 1744712 -  -2.3  -3.29511   TTGAGTCTCGGACAA               CGGCA ATCC TGCTG                GGCGGCAAGGGCTTA  44 38
D558_RS08430 NONE
D558_RS08425 NONE
D558_RS08420 1742128 .. 1742152 -    -5  -2.62396   CACGCCGCCACATCA          TGGACCACCT GCCCG AGATGGTGCA          GTGCTACGAGGCCGT  43 69
D558_RS18165 1741401 .. 1741455 - -30.9  -3.16683   ACGCCACGCGACGAA GCCCCGCTCATCCGGCAGCATCCCG AACCG CGGAATGTTGCCGGATGAGCGGGGT TTTTTTATGTTTCAA 100 53
D558_RS08400 1735105 .. 1735138 -  -9.6  -3.75153   CGTCTCGAACGCAAA     GAAGCAAGGCCTCC TGAAAG GGAGGCCTTTTTTC      ATGTCCGTCGCGCAA  72 56
D558_RS08390 1731895 .. 1731910 -  -3.2  -4.15044   CCGGTGCGCAAGAAA              GGCAAG CTTC CCTACC               GCACCGTCGCCGAGG  60 305
D558_RS08340 NONE
D558_RS08335 NONE
D558_RS08330 NONE
D558_RS08325 1718088 .. 1718100 - -10.5  -2.76696   CCTGTGTGCAACAAG                GGCCG GTG CGGCC                TTACTTCTTCGCGGG  63 26
D558_RS08320 1717125 .. 1717151 -  -2.9  -3.25223   CAGGCACAGCAGGAA        TTGCTGGAGCGC CGTG GCGG-CCAGCCA         TATGTGTGCCCGATT  45 145
D558_RS08305 1713484 .. 1713499 -  -4.7  -4.56597   CTCCTTCTCGAAAAA              GCGTT GTGAAA AACGC               GAGCTCTTGTTGATT  72 148
D558_RS08300 1712810 .. 1712825 -    -4  -2.58758   AGAATGCGCGACAAG              TGATTC ATGC GAACCA               TTATAGAGTTTTATG  42 257
D558_RS08295 NONE
D558_RS08290 1711353 .. 1711394 - -11.6   -3.9122   CAGTTGGGGAAACAA CG-CGGGCGCG-GTGACCCC GTTG GAGGTCAAACGCGCCCGTCA GGATCCGCGCCCCTG  81 55
D558_RS08275 NONE
D558_RS08270 NONE
D558_RS08255 NONE
D558_RS08250 NONE
D558_RS08245 NONE
D558_RS08240 1703609 .. 1703628 -  -7.2  -4.15044   CCCGCCGTCAAGAAA            CTGGTGCAG GCG CTGCA-CAG            CGACGCCGTGCGCAC  68 125
D558_RS08230 NONE
D558_RS08225 NONE
D558_RS08220 1700400 .. 1700415 -  -6.1  -3.05384   GCCGGCGTCAGGCAA              GCCCT CTATTC AGGGC               AATGCAAGCCGCAGG  52 19
D558_RS08215 1698767 .. 1698779 -  -6.9  -3.48924   TGACTCCTTAGAGAA                CGCCG AGC CAGCG                CCAGTAGGTCGCACC  60 5
D558_RS08210 1697620 .. 1697655 - -11.8   -3.5393   ATCAGCCGGTCCAAA    CCGGTCAAGGCCTGAG GCGG CTCAGGCCGTGATCTG     AAGCCGCGCCAGCGG  77 60
D558_RS08180 NONE
D558_RS08175 NONE
        gatB 1688159 .. 1688179 -  -9.7  -3.53444   CCACTGGCCGGTAAA            GTCGTCATC ATC GATGACGTC            ATCACCGCGGGCACA  65 352
D558_RS08155 1685075 .. 1685100 - -16.3  -4.07568   CTGCCGCGCCCAAAA         CAAAAGCTCCC TTGC GGGAGCTTTTG          TTTTAGATCTCGGGT 100 44
D558_RS08145 1683185 .. 1683208 - -15.2  -3.69354   GGCGACAAGGGCAAA          CGCCTCGCCC TGGT GGGCGTGGCG           GAGTACTCCCTGTCC  89 184
D558_RS08120 1677599 .. 1677633 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
D558_RS08100 NONE
D558_RS08095 1672658 .. 1672700 -  -6.5  -4.89852   CCAGAGTGAGAAAAA TCAGGCGG-CG-CATGCACA TTCTCC TGCG-ATGGCGGCCGCCTGA GGCGCTTTACGTAGC  86 32
D558_RS08085 1671022 .. 1671048 - -15.2  -4.61527   AAAACCCGTTAAAAA         CGGCGCTCAG TTCATGC CTGAGCGCCG         TTTCTTTATGCCTGC 100 61
D558_RS08060 NONE
D558_RS08055 1664282 .. 1664310 -  -4.6  -2.77899   TCGCTGGACCAAGTA       CGCCCTGA-ACAA CTGG TTGCGTCAGGCCG        GCCCGACCTTTGATA  44 128
D558_RS08045 1662603 .. 1662620 - -11.3  -5.06414   GCGCCGCAACAAAAA             CCTAGGG CAAA CCCTAGG              TATGTTGTAAACAAA 100 67
D558_RS08040 1662136 .. 1662148 -  -4.7  -4.57569   GGATGTCCTCAAAAA                GTGCG CCG CGCCC                GCCTTGCTGGCCGGG  72 172
D558_RS08035 1660225 .. 1660253 - -20.3   -3.6053   CCGTCCAGAAAGGAA        CAAGGGCGCCGCC TAT GGCGACGCCCTCG        GGCGGGTCAGTGTCC 100 74
D558_RS08030 1659198 .. 1659215 -  -6.2   -4.4009   CGCGATCGCAGAAAA             GCCGGC TCTTAC GCCAGC              GGCCGAGCCAGCCGC  72 16
D558_RS08025 NONE
D558_RS08020 NONE
D558_RS08015 NONE
D558_RS08010 NONE
D558_RS08005 NONE
D558_RS08000 1653079 .. 1653135 - -17.2  -2.71731   TGTATGTCGGAATCA CGCGTGCGCAGCGCAGTCTGCATC TGAGCTGGT GCCGCAAACGGCGCCGCGCGCGCG AGGACCGCGTCTGCG  84 185
D558_RS07915 1633916 .. 1633965 - -11.4  -2.90075   TGGCGGCCAAGGATA TCCA-GCGGCGCTG-GGAGCGCGCC TGA GGCGCGCGCCTCAG-GCCGCGTCGC TCAGCACGCAGTCCA  68 12
D558_RS07905 NONE
D558_RS07900 1631219 .. 1631231 -  -4.8  -4.82901   GCGGTTGGACAAAAA                CGAG TTTTT CTCG                AGCTGCGACGCCATC  80 427
D558_RS07870 NONE
D558_RS07865 1625216 .. 1625239 -  -5.9  -6.38039   CACGCAAAAAAAAAA          GCCCGG-TCC TTGGC GGTTCCGGGC          TTGGCTTTGGGCACT 100 192
D558_RS07860 NONE
D558_RS07855 NONE
        trpD NONE
        trpC 1620952 .. 1620964 - -10.5  -3.21099   CGGCGGCAGGACGAA                GCGGC CGT GCCGC                CGACAGACGAAGGCA  68 235
D558_RS07775 NONE
D558_RS07770 NONE
D558_RS07765 1607045 .. 1607059 -  -4.2  -2.76261   TTGCAAGTGGGAAAG               CGGCTA TCG TACCCG               GCTATTGCTGCGTGG  43 27
D558_RS07760 1606430 .. 1606454 - -13.5  -2.69647   AACCGGCATACATGA          CCAGTTGCCGC AAG GCGGCAGCCGG          GACTACGGACGAGGT  68 87
D558_RS07740 NONE
D558_RS07735 1601989 .. 1602007 -  -2.3  -3.62096   GTTGAGCAGTTCAAA             CCGGACA GCTTA TGCCCCG             CTTTTTTGTAACAGG  47 47
D558_RS07730 1599295 .. 1599305 -  -5.4  -4.64861   GCTGGTCAAAAGAAA                 CATG GTT CATG                 CGTTTTCTCCTAGAT  75 80
D558_RS07725 NONE
D558_RS07720 1597397 .. 1597439 -  -6.1  -3.09327   CGAGGCCAGCGAATA TCCAGCGCG-CTCGGGCCGC CTCA GTGGCCTGTGCCATGCTGGA TGCAAGGTTGCTGTT  52 3
D558_RS07715 1596435 .. 1596449 -  -4.2  -3.41051   GTAGTGTCATCAGAA               GCGC CGTCCTC GCGC               CAACAGCCAAAGGAA  49 5
D558_RS07710 1595250 .. 1595260 -  -5.4   -3.7282   GCACGTCATCAACAA                 GATC AGC GATC                 GGGACAGTGCCCAGG  58 409
D558_RS07685 NONE
D558_RS07680 1590057 .. 1590067 -  -5.4  -3.08032   GCTCGTGGAAAATCA                 TGGT GCA ACCA                 CTGTAGGCCGGCACG  49 89
D558_RS07675 NONE
D558_RS07670 1588160 .. 1588178 -  -5.3  -5.30155   CGATGAACCAAAAAA            TGGGCGTC CCGA GACGCC-A             GGCCAGGACGGCAGC  88 307
D558_RS07660 1585755 .. 1585778 -  -5.9    -5.243   CAAACCAGGAAAAAA          GCGGCCTAG TGTAGC CCACGCCGC           GCCTGCCTAGGGTAT  88 150
D558_RS07655 NONE
D558_RS07645 1582046 .. 1582076 - -15.5  -5.00884   AGCCGGCGCAAAAAA       GAAGGGAACAGCG GATGA CGCGGTTCCCTTC       GGGCAAGTGTAGGTC 100 113
D558_RS07640 1580803 .. 1580830 - -13.6   -3.9392   CGGCAGCGCAAATAA        CAAACCCTCC-GT GTG ACTGGAGGGTTTG        TGCTGAGCGCAGGCC  93 74
D558_RS07600 1572385 .. 1572402 -    -2  -3.53012   GCGGCCGGCGCGAAA             GCTG-GA GGTGT TCGCAGC             ACTACGATGGCGTAA  47 27
D558_RS07580 1568518 .. 1568533 -  -7.5  -3.51934   CTTTGTGCAGAAACA              GGCGG GCTGGG CCGCC               AAGTATCCGGATGAT  60 389
D558_RS07545 1560143 .. 1560162 -    -7  -4.08767   TCTACGTGGTGAAAA            CGAGCGGG CAAT CACGCCCG             GGGTGTCTCAGATCA  68 33
D558_RS07540 1558911 .. 1558935 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 184
D558_RS07520 NONE
D558_RS07515 1554009 .. 1554040 -  -7.2  -4.17048   CGTCGCGCAAAAGAA      TCATGGCCAGTGTA TCGC TCCTCGGGCCATGA       TTTATCCACAGACCG  71 45
D558_RS07510 1553014 .. 1553035 -  -5.7   -3.7108   ACCCCCATATCGAAA           CCGTGTTCG TCGT CGTACGCGG            CAAAGTCCAAGGCGT  60 290
        lldD NONE
D558_RS07495 1550961 .. 1550992 - -13.6  -3.42621   AACGCTAACGCACAA      CCCGGGCGCGTGGC AGCA GCTACGCACCCGTG       CCGGCCATTACCGGC  83 41
D558_RS07480 1547793 .. 1547803 -    -4  -3.57144   TTCCCTATGCCGAAA                 TGAA AGG TTCA                 TCGAGGAATACCGGG  51 23
D558_RS07430 1538052 .. 1538068 -  -3.5  -4.36914   CCCCGCCCTATAAAA              GCTCCGG CGG CCTGCGC              CGCATTCTGAACGTC  64 475
D558_RS07425 1537336 .. 1537362 -  -2.3  -2.88044   CAGCGGAGAAAACAG        GCCG-CAG-TATC GTG GATTTCTGCCGGC        GGTGCAGAGACATCA  40 38
D558_RS07420 1536220 .. 1536247 -  -7.8  -4.13343   AGAAACTCCGGAAAA        CTCATG-GCCTAC TGA GTAGACGCACGAG        GCCGGAAAATCCCAA  74 48
D558_RS07415 NONE
D558_RS07410 1534326 .. 1534340 -  -7.1  -2.90075   TCCTTCTCAAGTAGA               CGCAG CAGGT CTGCG               TAACCCAACCCTGTT  53 59
D558_RS18160 1531547 .. 1531578 -   -16  -4.11394   ATCTCACTCGTAAAA      GTAGATAAGGCCGC TCGC GCGGCCTTATTTAC       GTCGGGCATCAGGTG 100 324
D558_RS07390 1528696 .. 1528718 -  -5.4  -3.85698   GCCTTTTTGCAGAAA           GTGCCGGTGG TCT CCACCGATGC           TGGGGGCCTGAAAGA  60 240
D558_RS07355 1521786 .. 1521799 -  -4.5  -3.44848   GGTGCCCACCAAAGA               CGGTG GCTA CACCA                TGGACCACACCGCGG  51 160
D558_RS07325 1517477 .. 1517494 -  -5.6  -3.20164   CTATACCGAACTGAA             CCTGAA GTTCAA TTCAGG              GGCTTATGGTTCGCT  51 286
D558_RS07280 NONE
D558_RS07270 1507067 .. 1507088 - -15.9  -3.75153   CCTTGCCAAGCGAAA           TGCCTGCCC CTTC GGGCAGGCA            TTTTTCATTTGCGGC 100 297
D558_RS07260 1504266 .. 1504279 -  -3.7  -3.08798   AGTGCCCATGCAACA               CGGTG TTCA CGCCG                CTCGGCGATGGTTGA  45 460
D558_RS07235 1500516 .. 1500543 -   -20  -5.26875   GTGCCAACCAAAAAA        CATTACCCGGCC AGGG GGCCGGGTAATG         GTCAGTTGGGCGTGC 100 27
D558_RS07225 NONE
        gltD 1492591 .. 1492617 - -25.2  -4.98531   GCCGGAAAGCAAAAA         GCCGGCCTGCGC AGG GCGCAGGCCGGC         TCGTGCGTGCGTGTC 100 49
D558_RS07215 1491740 .. 1491780 -  -3.3  -2.80589   GGCGAAAGAAACGCA TGCGCGGAACT-CCTC TCTGTTATTT GAGTTAGATCCGCGCA  TTATGCGCTGCCGGC  41 50
D558_RS07210 1490758 .. 1490770 -  -5.5  -2.71712   CCCCTGGGCGGAAAT                CGCTA TTG CAGCG                TGATGTTACCGGCCT  47 15
D558_RS07205 NONE
D558_RS07200 1488932 .. 1488960 -  -2.3  -2.94924   GGCCCACCCAGAAAT        CGGTTTTTTCACG TGA CATGATGAATCCG        TATCAATTGCCAAAC  40 28
D558_RS07195 NONE
D558_RS07190 1487577 .. 1487599 -  -2.7  -2.64909   TAAAGACAGAAAACT           GCATGAAAA CTCCT TCTTCTTGC           CCGGCGTTACTTGGC  38 32
D558_RS07185 1486886 .. 1486923 - -10.4  -2.94595   AACCGTCATTATAGA   GGGGCCGGGGC-GAGCG GCCTG CGCACGGCCCCGGCTCA   GGCGCCAGGCCTGCC  64 56
D558_RS07180 NONE
D558_RS07175 NONE
D558_RS07170 NONE
D558_RS07165 NONE
        hisG 1483026 .. 1483042 -  -3.6  -3.53012   TCGGTCTTCGGGAAA              GGCAGG TCAAT CCTGTC              GGGTTGAGGCGCGCT  51 15
D558_RS07155 NONE
D558_RS07150 NONE
D558_RS07145 NONE
        hisH 1479287 .. 1479315 -  -3.6  -3.49419   TCGGTTGAGAAAAAG        GGCCGGCCGGGG CTCGT CCGCAGACGGCT        ATGGCTGCCAGTCTA  51 24
D558_RS07135 NONE
D558_RS07130 NONE
        hisI NONE
D558_RS07120 NONE
D558_RS07115 NONE
D558_RS07110 1476304 .. 1476322 - -13.1  -2.62184   CGCTTGGTTAGATCA             GGCGGGC TGAGC GCCCGCC             TGGAGCTCAGGAATT  71 32
D558_RS07100 1474965 .. 1474978 -  -8.1  -5.52384   GCCTTATGAAAAAAA               CCAGG CATG CCTGG                TTTTTTTCACGTGTG 100 49
D558_RS07090 1472954 .. 1472999 - -11.7  -3.53444   TCGCTCAAGAAGTAA GGAG-GCCGTCGCCGCCGCG GGCCTTG CGCGGCGCCAGCGGCGCACC GCCTTGCGGCATCAG  77 37
D558_RS07080 1471697 .. 1471731 -  -6.4  -2.64099   TTTGTGCAGCACAAC    GCCTGGTCGTTCTGC GCAGGG GCAG-ACGGTCAGGC     TTTGTTGTCTTCGTC  48 20
D558_RS07075 NONE
D558_RS07070 1469258 .. 1469290 -  -8.3   -3.9373   TATTGAAAAGCGAAA      GGCCAGCGTCCTCTA ACA TAGCAGGTGCTGGCC      CCGAATGCCAGGCAA  68 115
D558_RS07065 NONE
D558_RS07060 NONE
D558_RS07055 1467998 .. 1468017 - -10.6  -3.12351   CGCGCCGATAGCGAA            GCCCGGCC GTCA GGCGGGGC             GTTGCGGGATGCATC  66 41
D558_RS07045 1466353 .. 1466377 -   -10  -4.54727   CGGCGCAAAGCAAAA          GGCCCGCATA GGGAA TATGTGGGCC          TTTGGAATTTGGCTC  88 35
D558_RS07040 NONE
D558_RS07035 NONE
D558_RS07030 NONE
D558_RS07015 NONE
D558_RS07010 NONE
        prfC NONE
D558_RS07000 1457075 .. 1457096 - -10.9  -2.75844   CGCGCCAGCGGAAAC           CCCCCTTTC GCGC GAAAGGAGG            TTTTCAAGATTGGCA  66 45
D558_RS06995 NONE
D558_RS06990 1455898 .. 1455908 -  -6.8  -3.14132   GGCGCCCGGCAGTAA                 CGAG GCG CTCG                 CACTGGCACGCTAGC  54 36
D558_RS06970 NONE
D558_RS06965 NONE
D558_RS06960 NONE
D558_RS06955 NONE
D558_RS06950 NONE
D558_RS06945 NONE
D558_RS06940 NONE
D558_RS06935 NONE
D558_RS06930 NONE
D558_RS06925 1445239 .. 1445254 -  -4.7   -2.6155   CGGCTCAATACCAAC              GCATC CGGGTC GATGC               CAGCCTGTTCGGCTT  43 230
D558_RS06915 NONE
D558_RS06910 1444213 .. 1444226 -  -3.1  -2.81509   CAAAAGAGGCAATGA               CATGA AGTG CCATG                GATAACTCCGTGAGC  41 109
D558_RS06905 1443878 .. 1443919 - -14.5  -2.52676   CAGGCGCTTAACGGA TGCTCCACTGCG-CAACGGC GAG GCGTTTGACGCAGCGGAGCA TGTGGCCTGGGTAGG  78 41
        gabD 1442177 .. 1442203 -  -6.4  -3.77087   GATTCAAGAGTCAAA         GCGACCCCCCAG CGC CCGATGTGTCGC         TGTTTTGAAATCTGT  61 94
D558_RS06895 1440765 .. 1440800 -    -2  -4.20783   AGTCCATCGAAGAAA   TGAAGCATGCCGATCG CCTGAT CGAAC-GCAT-CTTCA    TGCTCGACGGCCTGC  63 435
D558_RS06870 1436540 .. 1436582 -  -6.4  -3.68827   GAGGGAGGATGCAAA CGAACACGCA-GC-CA-CGGC CGAT GCCGGTGCGCATGCGCATCCG GAAGCGGTCAATGGG  61 115
D558_RS06865 1434546 .. 1434570 - -17.2  -5.00616   GTGTGGTCGAAAAAA          TGCCCGGCTC GCGCT GAGCCGGGCA          TTTCATTTCTGCGGC 100 47
        argS NONE
D558_RS06840 1429463 .. 1429479 - -11.5  -2.91429   GAAAAGCGTTACAGA              CCCGGGC CAG GCCCGGA              AGTTCAAGAGTTTAT  68 37
D558_RS06835 1428743 .. 1428774 - -17.3  -4.25283   ATGCCGCCATGAAAA      CCCCCCCAAGGCC GGCATG GGCCTTGGGGGGC       TGAAGACAGATTGAC 100 48
D558_RS06830 1426760 .. 1426778 - -11.6  -3.53811   GCGAGTTTTTGCAAA             GCCGCCCC GAA GTGGCGGC             CATCTACCACCCGGC  72 362
D558_RS06820 1424891 .. 1424901 -  -3.2  -3.14132   CGTGGCTTGCATGAA                 CGTG TCG CACA                 GCAGCAGCAACACCA  43 262
D558_RS06810 1423461 .. 1423480 -    -8  -3.38522   GACGCAGTGCAAATA            TTACGTTT ACGT AAACGTAA             AGTTCAGTCGGGTTT  61 161
D558_RS06805 1422115 .. 1422127 -  -3.3  -3.64471   ATCGTAAAAGAAAAG                TGGCC CAC GTCCA                GCGCCAACCCGGCCG  52 102
D558_RS06800 1420767 .. 1420787 -  -4.6  -3.06696   TGGGTTGGGAATAGA           GGCGCACCC GGCA GGG-GCGCG            GTTTGTCTCGGCGGC  47 96
D558_RS06795 1419094 .. 1419106 -  -4.8  -2.54098   GTTGGCAATCAAGAG                CGTG GTAAA CACG                AGCGACTCCTTGGTG  43 50
D558_RS06790 1417078 .. 1417096 -  -8.8  -2.78384   CCCGGGCCGATGAGA             CCGACGAC ATC GTCGTCGT             CTACGTCAGGCTTTA  53 176
D558_RS06770 1413268 .. 1413300 -   -15  -3.53733   CCCACCGGATAAAGA     CAGGGCCACGGC-TGC TGG GCATGCCGTGGCC-TG     TTGGGGTCGAGCTGG  88 50
D558_RS06765 1411147 .. 1411171 - -14.4  -5.00616   GCCGGCCTTAAAAAA          CGAAAACCCC GCATG GGGGTTTTCG          TTGGCCTTGCCTGTA 100 51
D558_RS06760 1408756 .. 1408776 -  -4.5  -2.93901   ATTCCATCAAGGATA            TCCAGGGCG TTG CACCCAGGG            GACGCCGCGCGGGGG  46 62
D558_RS06755 1408134 .. 1408157 - -18.2  -2.56273   AGGACATTGAATGCA          TCAGGGGGCG TTGT CGCCCCCTGA           TGGTTCGAGGAAGTG  95 51
D558_RS06750 1407229 .. 1407257 -  -2.9   -3.1372   CATGCTGGATGAAGA        CCTGCAGCCGCTC TAG GTGCGGCCAAAGC        GCGCGCCCCAGGCCC  43 9
D558_RS06735 1405111 .. 1405145 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
D558_RS06715 1400294 .. 1400318 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 121
D558_RS18150 NONE
D558_RS18145 1398690 .. 1398700 -  -3.2  -4.05004   GCAGGAGAACAACAA                 GCTC AAG AAGC                 TGTTGGCCGAGTCGA  58 198
D558_RS06685 NONE
D558_RS06680 NONE
D558_RS06675 1390826 .. 1390856 -  -2.4  -2.78816   CTATTGCCGACTATA       TCGCTGGCATGACG GAT CGTTACGCCATCAG       CGAACATAGGCGGAT  40 214
D558_RS06655 1385411 .. 1385450 -  -8.5  -2.64155   GCGCGTGTAAATGCA CGCGAGGCCGGGTCGCTCC CGCA GGAGC--CCCGGCCACATG  CTTCAGAACTGGATG  57 28
D558_RS06645 1383341 .. 1383355 -  -5.6  -2.70932   CGTCTGGCTCAACTA               TGCCGC CTG GCTGCA               CATGCGGCTGATCAA  46 228
D558_RS06625 NONE
D558_RS06620 1377040 .. 1377054 - -11.4  -2.87132   TGGCTTGGTCATACA               GCGCGT CTC ACGCGC               GCTCGATCCGTTGAC  64 405
D558_RS06600 1373541 .. 1373558 -  -8.4   -4.1585   CCATAAGCGGCAAAA             GCGGAC TTTCGG GTCCGC              TTTTGCTTTTTGGCG  78 41
D558_RS06505 NONE
D558_RS06495 NONE
D558_RS06490 NONE
D558_RS06485 1357698 .. 1357730 -   -10  -2.54812   ATTCACACCATGAAG     GATGTG-ATACGCGC CGAT GTGCGTATGCACATC      ATGTAGTCGCAATAA  62 46
D558_RS06475 NONE
D558_RS06470 NONE
D558_RS06465 1354899 .. 1354921 - -19.2  -5.31275   TGCCACGAGAAAAAA           CGGCCGGGAT TGC ATCCCGGCCG           TTTTTTTATCTTCGG 100 53
D558_RS06380 NONE
D558_RS06375 NONE
D558_RS06370 1339279 .. 1339295 -  -2.1  -3.52652   TCCAGGCAAGTACAA              CGTGGTG GTG CGCAACG              CCGATCTATCGCCTT  47 109
D558_RS06360 1337573 .. 1337604 - -20.4  -3.25823   CCCGTCGTACAGCAA      GCAAAAAGCCAGTC CGAA GACTGGCTTTTTGC       TTGGCGGGATAAGGC 100 48
D558_RS06260 1315765 .. 1315786 - -14.5  -3.15663   AGGCACGTTGATCAA           CGGCGTATC AAGT GATACGCCG            TTTTTTTTTCTGATC  83 39
D558_RS06225 1306469 .. 1306496 - -10.5  -3.31931   TCACACAATGAGCAA        CGCGTGGCCCC CGGCCT GAGGCGACGCG         CTTGTCTCAGGTCGC  68 32
D558_RS06210 NONE
D558_RS06205 NONE
D558_RS06200 NONE
D558_RS06195 NONE
D558_RS06190 1297323 .. 1297339 -  -5.1  -2.63149   GAAAGGAGAGAACAG              GTTTGCT TGT AGCACAC              GCATTTCAGGGAACG  43 31
D558_RS06185 1295774 .. 1295788 - -11.4  -3.27511   ACAAGGCAATGAACA               GCGCCA GGG TGGCGC               CAGCGACATAATCGG  71 334
D558_RS06180 1293121 .. 1293152 - -16.6  -5.65177   ATACGCACAAAAAAA      CCCCCGGGTCAGTC CAAA GACTAACCCCGGGG       GTCTGATCACACATA 100 45
D558_RS06155 NONE
D558_RS06150 1287218 .. 1287232 -  -3.4  -5.75342   TGTGTTCAAAAAAAA               GGCGGC CTC ACGGCC               GGTCCGCTGGCGCAA  90 72
        gyrB 1284652 .. 1284674 -  -8.5  -5.00895   GCGACCATATAAAAA          GCGG-CTACT AAAA AGTAGACCGC           TTTTTACTTGCAGAA 100 97
D558_RS18140 1283972 .. 1283988 -  -8.7  -3.40403   GGTCTCGCATCAGAA              GCACGAC ATT GTCATGC              CGAGGATCGCGCTGT  64 3
D558_RS06140 NONE
D558_RS06135 1282703 .. 1282751 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS06130 NONE
D558_RS06125 1282042 .. 1282078 -   -13  -2.59431   CCGCCTGAGAAGGCA   GCC-GTCAGGCGCCGGCC GCG AGCCGGCGCA-GACAGGC   GCGGGCATCCCCCTG  71 194
D558_RS06105 1277820 .. 1277838 -  -3.8  -3.66874   TCAAGCGCATGGAAA            CCGCCGG CGTCAT CCG-CGG             CTATACCGTCGACCT  53 341
D558_RS06095 1275432 .. 1275448 -  -5.8  -3.30124   TCTGACCTGGTACAA             CGGCAGC AAGG GC-GCCG              TCGTCACGACCAGCA  53 335
D558_RS06085 1274560 .. 1274608 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 116
D558_RS06080 1274050 .. 1274071 -  -3.5   -4.8622   GTCTGCAAGGAAAAA           CCGCCATCG TAAC CGGCGCCGG            TTCGGGGTTTGGCGA  73 60
D558_RS06040 1264438 .. 1264448 -  -6.8  -3.54424   TTCCAGTTTCTCAAA                 TCCG GTT CGGA                 TGAACCATGCATACA  60 43
D558_RS06035 1263225 .. 1263257 -    -9  -4.07885   CACGCCGGTTGAAAA      CGGCTGCGTCGGTG TTCAC CCCCGAAGCAGCCC      GCAAGGCTACAGCGA  72 202
D558_RS06000 1255367 .. 1255383 - -10.9  -3.40403   CTCGGTCTATGACAA              CGTCTTC CTC GAAGACG              ATGTGTTCTGCGGCC  70 523
D558_RS05985 NONE
D558_RS05980 1250357 .. 1250372 -    -4  -3.84246   GTTGGAATGATGAAA              CTGGCTC TTG GA-CCAG              CCTGATTGCATCTTA  57 97
D558_RS05975 1249230 .. 1249243 -  -3.7  -2.54325   TGTCTTCAAAGATAG               GGAGG CTCG CCACC                TTTCGGTGCGCGCCA  41 2
D558_RS05970 NONE
D558_RS05965 1246330 .. 1246358 - -24.7  -3.54424   GTTCAGCCCTCGAAA        GCATCAGGCCGGC ACA GCCGGCCTGATGC        CTGGCTCCTACCTAA 100 37
D558_RS05955 1243107 .. 1243121 - -12.8  -2.52676   GAGTTGCTTAACGCA               GCCCGC CTG GCGGGC               GTAGGCCATCTAGAG  71 75
D558_RS05935 1239389 .. 1239401 -  -4.7  -3.15503   TGCCAACACGCAAGA                CGCGC GCT GCGGG                CAAACGAGGGAAATG  47 108
D558_RS05930 NONE
D558_RS05925 1238339 .. 1238352 -  -3.7  -2.62983   CCCACTGGCATAGGA               CGGGC CATT GTCCG                TGTCGTCTTCCCGAC  42 75
D558_RS05920 1236586 .. 1236599 -  -4.5  -3.65991   AGCTGCGCAATATAA               CGCAG GGCC CTGCA                AGCAGCGCCTCAGAC  56 35
D558_RS05915 1235094 .. 1235141 - -15.6  -2.60392   CACTGGCGAATGAAT CCG-GCCCGGACTGCTTCGCGTC GAC GATGCGAAACCATCCGGGCTCAG CCGCAAAAAATACGG  81 119
D558_RS05910 NONE
D558_RS05905 NONE
D558_RS05900 1232152 .. 1232172 -  -5.4  -3.66018   TGACGACGCGAATAA            GCGACATA AACCG TATGGCGC            CTCATCATCTGAAAG  58 127
D558_RS05895 NONE
D558_RS05890 1229719 .. 1229731 -  -4.8  -3.76492   GCCAACTGGACCAAA                CGCT TTCTG AGCG                GCGTGGACGCGTTGG  58 384
D558_RS05865 NONE
D558_RS05860 NONE
D558_RS05855 NONE
D558_RS05850 1222206 .. 1222219 -  -2.3  -2.57522   GGAATTTACATCAAT               TAGCG AAGG CGCTG                CTCAGACAGGCAGTT  38 27
D558_RS05845 1221078 .. 1221094 -  -3.6  -3.35996   CATGCCCAGCCATAA              GACTGG AGCGG CCAGGC              AAAACAGTGCTGTGT  49 69
D558_RS05840 1219417 .. 1219436 -  -8.6  -3.25356   ACCGAAACCCATGAA            GCGATCGCC ACC GGC-ATCGC            CGCCGCACAGGCCGG  59 443
D558_RS05825 NONE
D558_RS05820 NONE
D558_RS05815 NONE
D558_RS05810 NONE
D558_RS05805 1213739 .. 1213749 -  -5.4  -2.98545   CGGCCACAACAATTA                 TAGG CAG CCTA                 TCCGACTGTCTCGAA  48 98
D558_RS05800 1212340 .. 1212377 -  -6.9  -3.29325   CTCCTAGAAGGAAGA   TGACCCTGGCGAACGGA GATT TCCGTTCGCCACTCACA    TGTCGGACATAGCTT  56 62
D558_RS05795 NONE
D558_RS05790 NONE
D558_RS05785 1210375 .. 1210409 -  -2.7  -3.15663   ACTGACTGGCATCAA    GCGGCGTGGACA-TGGG GCA CCCTCTGGGC-CGCCGC    GGGCGTGACGGCCAG  41 57
D558_RS05780 1209341 .. 1209370 - -22.3   -3.6502   CAGTCCGGACTGAAA       TGCGACATCGCCC CGTG GGGCGATGTCGCA        TGGGGCTGGCGCAGG 100 41
D558_RS05770 1208242 .. 1208265 - -13.2  -3.53091   ATCGTTGCCTCCAAA          CCCTGGCTTCG CAA CGA-GCCAGGG          TTTTTCTTTTGCCCG  81 44
D558_RS05740 NONE
D558_RS05735 NONE
D558_RS05730 NONE
D558_RS05725 NONE
D558_RS05720 1199199 .. 1199213 -  -5.8   -3.3344   AGTTAAGGGTCAGAA               TGATAT AAC ATATCA               AAAACTAGGCAAGAG  53 54
D558_RS05715 1196866 .. 1196883 - -11.3  -3.36273   GTGGTGCAACAGCAA             TTGGGCC GGCT GGCCCAA              GCCGCAGGCATGCCG  70 253
D558_RS05685 1191294 .. 1191316 -  -6.9  -5.41143   TACTGCCCAAAAAAA           TCCCCTGAC TCAAG GCCAGGGGG           TTTTGCATGCAGCAC  95 42
D558_RS05670 1189797 .. 1189815 -  -4.4  -4.15006   ATACGCATGCCAAAA             CCCCAAGG AGA CGATGGGG             TCGATTAGGCCCGCC  64 67
D558_RS05665 1188606 .. 1188626 - -13.9  -3.53224   GAGCGCCGTTGCAAA            GCGCCGCAC ATG GGGCGGCGC            CTGGACACGATCCCT  83 145
D558_RS05660 1187021 .. 1187041 - -10.4  -3.72695   ATCTCCTTTAGTAAA            GGGTGGCC TCAAC AGCCACCC            CTATTGTGCAACATC  75 48
D558_RS05655 NONE
D558_RS05650 1185750 .. 1185784 - -11.4   -5.1861   GGCATGATGAAAAAA     GCCGGCATCGAACCTC AAT AAGGTTGTACGCCGGC     CCGAAGGCGGCACCC 100 65
D558_RS05640 1184232 .. 1184246 -  -2.8  -2.54098   GCCGGTAACCAAGAC               CGAC GTGGGGA GTCG               CTAGTGCTTGGCGCA  39 26
D558_RS05635 NONE
D558_RS05630 NONE
D558_RS05625 1182569 .. 1182603 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
D558_RS05590 NONE
D558_RS05585 1173040 .. 1173051 -  -2.2  -3.54424   GGCCATTGGCTGAAA                CG-GG GTG CCGCG                TTGCTGGTGGACTAT  47 461
D558_RS05550 NONE
D558_RS05545 1165639 .. 1165666 -  -2.5  -3.91858   GATAGACGCGACAAA        GCTTGGCGTGC TGACAG GCACGCTGTGC         TCGGCGATTGCGGGC  55 74
D558_RS05525 1162192 .. 1162214 -  -2.6  -3.96216   GCGCGATTCAAAGAA           CGCGAGAAAA CAC CTTTCAAGCG           CTACAAGATTACGCC  57 212
D558_RS05510 1159453 .. 1159497 -  -6.5  -3.90291   AGCCCGGCAATGAAA GCGACGCGCTAG-GCCGAGCCGG CAG CCGGC--GGCACCAGCGCACC-C AATATGCCGCTGACG  64 144
D558_RS05505 1159097 .. 1159112 -  -6.1  -3.95073   GCCGATATCCAGAAA              GGCCA GCACTT TGGCC               GGGTCCGTCATCCCG  66 101
D558_RS05500 1158297 .. 1158310 -  -6.7  -3.33261   GGCGAAGTGGGAGAA               GTGGT CATC ACCAC                GCTGAACCCGGACTA  55 469
D558_RS05460 1149056 .. 1149068 -  -3.3  -3.53012   TTTCCTCGCCTGAAA                GAGCG CCG CGATC                AATTGGCCGGCACAC  49 396
D558_RS05425 1141631 .. 1141649 -  -3.7  -2.65532   ATTACTCCAAAGCTA             TACCGGC GAGCT GCCGGCG             GGTTGCACAGCCTGT  42 4
D558_RS05420 1141085 .. 1141100 - -10.4  -4.77165   TCGGCCACAACAAAA              CAGGCC CGAA GGCCTG               TAGGTATGCGTGGCG  95 52
D558_RS05415 1138178 .. 1138190 - -10.5  -3.29144   GCACGTGCCCTACAA                GGGCG CCG CGCCC                GCCATCCAGGATCTG  65 432
D558_RS05400 1135282 .. 1135295 -  -2.3  -2.71712   GGTCGGCGCCGAAAC               GTCCG CAAG CGTAC                CGAGAACGGGCGCGC  39 102
D558_RS05395 1134131 .. 1134183 -  -5.4  -2.52623   CGCCTTCGACAAGAT TGCTCA-GCTCTATCGGCGCTGACCG TTG CGGACAGCGCCAGT-GCGCGTGCGCT GCGTCGGTAAGGCAG  45 61
D558_RS05365 NONE
D558_RS05360 1126880 .. 1126925 - -15.3  -4.55128   ATGCGCAAAGTAAAA GCGCCAGGCCGGCCTGCCACA CCCT CGTGACGGACCCTCCTGGCGC AAGCCCTCAGATCTC 100 46
D558_RS05350 1125029 .. 1125041 -  -4.9  -3.13743   AAACTGGATATCTAA                TAGTT TTA AACTA                ACTTTGGCTTAAAGA  47 48
D558_RS05345 1124404 .. 1124421 - -14.1  -4.33258   AGCGCTAAATACAAA             GCCCGCC AACA GGCGGGC              CCAGGCTGAAGCGGC 100 50
D558_RS05340 1123143 .. 1123161 -  -8.1  -3.21747   GGATGCCACCACTAA            CCTGCGGC TGGA GCCGC-GG             CCGTCGTTAGCGGCG  59 260
D558_RS05330 1119763 .. 1119791 -    -6  -2.78463   AGCGCGGGCACGATA       GAC-GGCCG-GGTC TAT GACCGCGACCTGCC       GCAGCGCCTGCGCGC  46 124
D558_RS05300 1113465 .. 1113477 -  -3.3  -3.54129   GACACCCCGGTCAAA                CCAGG CGA CATGG                TCCGCGTGCGGGTCA  49 120
D558_RS05260 NONE
D558_RS05255 1103746 .. 1103760 -  -4.2  -3.39505   ATTCCATATGCAGAA               CCGCTA TGG TAGCCG               TTCGCCGCGCTGCGC  49 90
D558_RS05250 1102364 .. 1102380 -  -6.5  -3.04461   CATGGACTTTCAATA              GGGGCAT GCT ATGTCCC              TATTCTTGGCGATTC  52 39
D558_RS05245 NONE
D558_RS05240 NONE
D558_RS05235 NONE
        trkA NONE
D558_RS05225 1096093 .. 1096119 - -12.4  -3.66666   CTGAAAACCGGCAAA         GGGAAAACCC GAATACG GGGTTTTCCC         CGGATAAAAGCGCAG  81 108
D558_RS05220 1094256 .. 1094266 -  -8.2  -4.07568   TCTGCTGGTTGAAAA                 CGGC TTC GCCG                 ATCCCGTCATGGATC  72 335
D558_RS05210 NONE
D558_RS05205 1092299 .. 1092314 - -11.8  -2.89881   GACTGATCGTACACA              GGGGCC GCGA GGCCCC               TGTGTCATTCACCGC  71 30
        gpmA 1087859 .. 1087878 -  -2.8  -2.88776   CCAAACCCAGCAAAC            CCGC-TGCG AAC CGCATGCAA            TCAGTCCTTCTTTGC  42 26
D558_RS05170 NONE
D558_RS05165 NONE
D558_RS05160 1084010 .. 1084022 -  -3.4  -2.78371   TATATCCTCAAGAAT                TCAG GTTAT CTGA                TAACTTTTGCCGGGC  41 63
D558_RS05155 NONE
D558_RS05150 1081827 .. 1081866 - -17.8  -3.08798   ACCTGCCAGCTAACA  CATCTCCGGGGCCCCCGT ATTC AGGGCGGCCCCGGAGTTG   CCCCCTTAAAGAAGC  91 31
D558_RS05140 1079811 .. 1079833 -  -5.4  -3.50869   CATCATGGGATAGAA           CCAACCCGGC TCC GGCGGCTCGG           TGTCGGCCGGCAGGC  55 224
D558_RS05125 1075425 .. 1075444 - -12.1  -4.72272   GGCCTCCATGAAAAA            GCCCGCC GGCAAG GGCGGGC             TTTGATGCGGCAGAC 100 50
D558_RS05110 1073216 .. 1073236 - -16.1  -3.64822   ATCCTGGCAGCCAAA            CGCGCCGCC CAC AGCGGCGCG            CACACTGTCATCGCC  90 469
D558_RS05085 1069313 .. 1069330 -  -3.3  -4.68593   TGCATTACGCAAAAA             GCTCGCT TCGC AACGCGC              TTCGATCTAGTGATC  69 32
D558_RS05080 1069121 .. 1069146 - -12.5  -5.22039   CGCAAACGCAAAAAA         GCCGGCACCGC TTAC GCGATCCCGGC          TTTTGCCGCACGTGC 100 72
D558_RS05070 NONE
D558_RS05065 1067312 .. 1067327 -  -3.2  -4.85782   TTCTTCAAAAATAAA              TCTGGA CAGT TCCGGA               GCTCGGCATCCGCGC  73 44
D558_RS05060 1064519 .. 1064541 -  -2.6  -3.86015   GACTCTGTTGAGAAA           GTCGACTGCG CGT CGCAATTGAT           CGTGCTTATCAGGCC  53 232
D558_RS05030 1056469 .. 1056513 -  -2.6  -4.09353   TACGCAAAAACACAA CGCTGCACGATGACGGCCAGC CCAT GCTGGCCGAAGACAT-CCGCG CGCTGGGCCTGGAAT  58 363
D558_RS04985 1042530 .. 1042553 -  -5.3   -2.8704   AAGAAAATTGGAAAT         CACG-C-GCGC GCAT GCGCTGCCGTG          CCATCACGGCGCAAG  48 53
        prfA NONE
D558_RS04975 NONE
D558_RS04970 NONE
D558_RS04965 1039291 .. 1039315 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 376
D558_RS04930 1032968 .. 1032991 -  -2.6  -5.09762   CTGCAAGAAATAAAA          CTCAAAATAAA ACA TTTATTTCG-G          ATCACGCGATATGAA  77 27
D558_RS04910 1029194 .. 1029228 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 251
D558_RS04890 1024511 .. 1024526 - -11.8  -2.77899   CCGTCCCATGAAGCA              GCCCGC TCGC GCGGGC               TGTTTTGTTTTGGGT  70 170
D558_RS04875 1020779 .. 1020798 -  -4.2  -2.57211   ATGTGGCTGGACAAG            GCCGATAC CTGG GCATTGGC             TGACACCCTGGGCGG  41 210
D558_RS04865 1016944 .. 1016983 -  -4.8  -3.67121   CAGAAAGTAAAGCAA  GCAGCGCGA-GGCTGGCGC GAC GCGAGAGGCGTTGCGCCGC  CATGAAGGTAGGGCG  56 306
D558_RS04860 1013832 .. 1013848 -  -4.4  -3.23984   GAAATCCATGACGAA             GCTCGCT TACC AGCG-GC              CTTGGCACGACGCCT  49 231
D558_RS04855 NONE
D558_RS04850 NONE
D558_RS04845 1010612 .. 1010642 -  -9.7  -3.72576   TTTCGCGCGATGAAA       TGCTGCGGGCC TTTCTGCCT GGCCTGCAGCA       CGCAGCGGGCCAGGT  71 103
D558_RS04835 NONE
D558_RS04830 1008970 .. 1008982 -    -2  -3.57263   AGGGGCATGCCCAAA                TTCA GTTGG TGAA                CTTCAGCGGCAGGCC  47 14
D558_RS04825 NONE
D558_RS04820 NONE
D558_RS04815 NONE
D558_RS04810 1006238 .. 1006248 -  -2.4  -4.58395   CGCAGCGGGTAAAAA                 GGGC GAT GACC                 GCAAAACGTATATGA  67 235
D558_RS04800 1005561 .. 1005573 -  -6.2  -4.09685   CTGGATGCTGGAAAA                CGGC GGGTG GCCG                GGGCTTATTGCGCCG  66 30
D558_RS04795 1004729 .. 1004755 -    -5  -2.71144   GAGGCGCGGGAACGA         GTCATCGCGACG CGT CGCCACCGTGAC         GGCCGGCGCGCGAGC  44 58
D558_RS04790 1003093 .. 1003116 - -10.2  -4.07568   GCGCCGGCGTCAAAA          GGCGCCTCGGC ATC GACG-GGCGCC          ATTGCGGTGATTTGC  80 119
D558_RS04785 NONE
D558_RS04780 1000821 .. 1000869 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS18125 1000238 .. 1000273 -  -2.4  -4.29472   GAAACCAAAACGAAA    GGGCTG-CATGTCCCCT ACA AGGGGTCAGGTCAGGCG    GTTTCAGACTTGCTC  63 119
D558_RS04750  996181 ..  996226 -  -3.1  -2.57244   TGAGTCATGAATGCA CCTCCAGCACGGGCCCGCT-GC CTC GCGAGCAGACCCGTGCGTCATA CTACTGCTTCACGGC  40 26
D558_RS04745  995653 ..  995667 -  -6.4  -3.66654   TACGCCAACGGCAAA               CGCGAT CGC ATCACG               CCCGAGGCAATCCCG  59 208
D558_RS04725 NONE
D558_RS04720 NONE
D558_RS04715  987970 ..  987983 -  -3.7  -2.78384   TGGGCCTGGATTACA               CCCGC ACGA GCGGC                TGCGGCATTTATACG  43 374
D558_RS04705  984920 ..  984940 -  -2.4  -3.56092   CCATGATGCTCGAAA            CCATGGCG CACTT CGGCGTGG            ACAGTTTTCCGGCGC  50 211
        fadE  981086 ..  981115 -  -6.3  -3.57387   AAGACATGTTCGAAA       CCATGATCGCCGCC AAC GGCGTCGGCC-TGG       CCGCGCCGCAGATCG  57 431
D558_RS04640  970239 ..  970257 - -10.2  -4.05322   AAACGCCGATAGAAA             GCGCCCAG GCT CTGGCCGC             CCGCGGCTTCCAGAT  78 209
D558_RS04615  965521 ..  965543 -  -8.3  -2.60486   AACAACGGGGACAAT           CGGCCGGAC ACCAG GCCCGGCCC           GCGAATTCGATTTAT  53 37
D558_RS04610  963892 ..  963942 - -16.1  -3.65522   GATCCACCTTAAGAA CACGACGGCCCCCGCAGGCCGGAC AGGC ATCCAGCTTGCGGGGGCCG-CTTC AGACCGCTGGCAGAA 100 50
D558_RS04605 NONE
D558_RS04600 NONE
D558_RS04595  960979 ..  961011 -  -6.1  -3.62616   CATCACGAGATACAA      GCCGCGCTTGCGGAA CTG TTCTTCCAGAGCGGC      AAGCCGCTCTGGCGT  58 56
D558_RS04590  959810 ..  959834 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 75
D558_RS04575  957340 ..  957389 - -11.4  -3.53012   TCCGTGCTGCGCAAA CCAGGCAACGAACCGCGCA-CCCC GCTC GGGGCCGCCTGGCTCGCTGCC-GG ATGGCGTCAGACGCC  74 32
D558_RS04550  952762 ..  952776 -  -5.6    -5.243   GAAAGCATGAAAAAA               CCCGCT GAG AGCGGT               TTTTTTTCCGTACAA  88 50
D558_RS04535  949135 ..  949152 -  -9.9   -5.4833   GCAGGCAACAAAAAA             TCCATCC CTCG GGATGGA              TTTTTTTTCGCCGAT 100 63
D558_RS04520  945687 ..  945716 - -22.2  -5.76949   CAGGCTGAAAAAAAA       GTGCCGCCCGCC TTATAG GGCGGGCGGCAC        GTATGCCATGCCTGG 100 43
D558_RS04510  943538 ..  943567 - -18.1  -2.83522   AGGTCCGCAGCAAAT       GAAAAAGCCGTGT AAAT ACACGGCTTTTTC        GCCACGCTCAGGCCG 100 44
D558_RS04500  940346 ..  940356 -  -6.8   -3.1372   GACGGCGCAGGAACA                 CCAG GTG CTGG                 AGCTGGTCGAGCGCG  51 421
D558_RS04465 NONE
D558_RS04460 NONE
D558_RS04455 NONE
D558_RS04450  929710 ..  929731 -  -2.9   -4.8622   TTTCTCAACGAAAAA           GGCCAGCTCT GCG AGGGC-AGCC           GCAGCAATCTCTATC  78 249
D558_RS04430  920872 ..  920887 -    -4  -2.76227   CGCAAGAGAAAGGGA              GGCTGAT TCT ATC-GCC              CCTTAAGCCGGCCCG  43 51
D558_RS04425  919101 ..  919116 -    -6  -4.08216   CTATGTGCTGGAAAA              CGGCGC CATG GCGCTG               GAAGGCAGCGGACGC  66 161
D558_RS04395  912434 ..  912492 - -11.1  -3.01712   GGCCTGCGCGCAAGA CGGCCAGGCCGCTGCCC---TGGCGCTG ATCGCG CAACGCCATCTGGGCGACAACCTGGCCG CGCTGGGTGCCCAGG  65 389
D558_RS04385  911101 ..  911116 -    -6  -3.06815   AGCTCCGGCAACATA              TGCCGC TCCT GCGGCC               CGGTGTAAGGCTTGA  52 139
D558_RS04380 NONE
D558_RS04375 NONE
D558_RS04370 NONE
D558_RS04365  908786 ..  908829 -    -8  -3.64103   GACCCACATGCGAAA GCCCCCGTGCGCCATGGCG GTATTCG CGCC-TGGCGCCCGGGCAA GCGCAAACCGCCCCC  66 57
D558_RS04360  907993 ..  908016 -   -21  -5.27335   TCGCCCAAACAAAAA          CGCCCGGCGC TCAG GCGCCGGGCG           TCATTCGCTACCTTC 100 48
D558_RS04355 NONE
D558_RS04350  906470 ..  906482 -  -4.7  -3.73224   CCACCCTGGACGAAA                CCGTG GCG CCCGG                CTTTGCCGTCTCGAG  58 295
D558_RS04325 NONE
D558_RS04320  898772 ..  898794 -  -3.3  -3.03124   GGCGATGCGGGAACA          GCGTGCGGCC GGCT GGCCGC-CAA           TCAGGAACTGGCTGC  43 26
D558_RS04315 NONE
D558_RS04310 NONE
D558_RS04305  895502 ..  895538 -  -5.8  -2.89133   ACACATAACGAAGGA   CGCAGGGC-GAGCGC TCTCATAC GCGCTCCGAACTGCG    CTTGCCGAACAGGCC  48 5
D558_RS04300 NONE
        livG NONE
D558_RS04290 NONE
D558_RS04285  891948 ..  891959 -  -5.8  -3.53012   GGCTCTGCCTGCAAA                CGCA CGAT TGCG                 ACTAAGGATATAAGC  55 49
D558_RS04280  891259 ..  891276 - -10.5  -3.25823   CCTGCCGCAGACCAA             CGGCGGC AAAA GCCGCCA              ACAATTGCTGGTGGA  65 375
D558_RS04245  883825 ..  883850 - -14.7  -4.56607   TTATCAATTACAAAA         CGGCCGGCC CACCATCC GGCCGGCCG          GCGCGGGTTCAATCC 100 34
D558_RS04240 NONE
D558_RS04235  882273 ..  882286 -  -5.9  -3.65314   GGCAATGGCGAAGAA               GACGC AGCG GCGCC                CAAAAACCTGAACGA  58 71
D558_RS04230  879762 ..  879816 - -22.9   -4.3953   CCCAACGAGAATAAA TCATGACCTCGTGCGGATCCCGCCC CGCGC GGGCGGGATCCGCACACGGCAATGC CCTTACCAGCGGTGC 100 28
D558_RS04225 NONE
D558_RS04220 NONE
D558_RS04215 NONE
D558_RS04210  875588 ..  875621 -  -4.3  -4.11216   GCCGCATCTGGAAAA     GCGCTTCGAGCAGAT GTCG ACCGGCACGCGGCGC      AAGGTCTTTGTGGCC  62 247
D558_RS04175  870605 ..  870623 -  -5.8  -2.70946   GAGAACACGATAGTA             GCGTCCCC GCC GGGCTCGC             GCTTGCCCGGGCATG  47 56
D558_RS04170 NONE
D558_RS04165  868576 ..  868588 -  -4.1  -4.28254   CGCCAACATCGAAAA                CCTGT TCA ACAAG                AGCTATTGGCTGGCC  66 323
D558_RS04130  860452 ..  860462 -  -2.4  -2.78816   CCACCGGCGACGACA                 GTCG GCC CGCC                 TCGGAGCCGTTGCGC  39 41
D558_RS04125  859672 ..  859693 - -17.3  -5.24129   CCGGGCCAGAAAAAA           CACGGGGCC CGCA GGCCCCGTG            TTTCATTGCCAAGCC 100 49
D558_RS04110  856060 ..  856106 - -21.6  -3.01712   GGCGCTGGTCGAAGA CTTCGTGCAAGACGTACGCGAC GTC GCCGCGCACGTCTCGCGCGAGG TGCTCAAGGGGCAGT 100 29
D558_RS04100 NONE
D558_RS04095 NONE
D558_RS04090 NONE
D558_RS04085 NONE
D558_RS04080 NONE
D558_RS04075 NONE
D558_RS04070 NONE
D558_RS04065 NONE
D558_RS04060 NONE
D558_RS04055 NONE
D558_RS04050  844706 ..  844735 -  -2.3  -3.35798   ATCCGGCATGGACAA       TACAATTAGAT GATATGCA AACTAATTGTA        TGCCATTAATTGAAG  46 42
D558_RS04045 NONE
D558_RS04040  843005 ..  843026 -  -5.7   -3.8613   GCTAAACAGGAATAA           GCGGCTCGC AAAA GCATACCGC            CAATGCGTGCGCCAT  61 56
D558_RS04035  841831 ..  841864 -   -16  -3.74047   AACCAGGAAGAAATA     CGGCCGTCCGCAAC CTAAAT GCCACGGACGGCCG      TCAGGTGCATGCCGG 100 45
D558_RS04025  839720 ..  839732 -  -2.6  -3.14564   TCAGGGCCGCAGGAA                GAGG CCGCT CCCC                CTTCCCGACACGGTT  42 306
D558_RS04015  837849 ..  837870 -  -5.1  -3.26347   AGAGGTTAAAGAAAG           GCAG-GCTGA AAC CCAGCGCCGC           GAGACCCTCGAGCAG  49 264
D558_RS03985  832133 ..  832150 -  -9.8  -2.70138   AGCCATAGTAAATAG             GCCGGC ACGAGG GCCGGC              ACGCAAGGAGAGCAA  60 325
D558_RS03980  829872 ..  829886 -  -4.9  -2.79302   ATGATCTGCACCATA               CGGCC GCTCA GACCG               GCAAGGTCGACATGG  45 444
D558_RS18095  828509 ..  828523 -  -9.2  -3.53012   CGGCTTCCTTCCAAA               GGGCGA CGC CCGCCC               CGCCCTGACATTATC  69 79
D558_RS03970 NONE
D558_RS03965  827103 ..  827135 -  -5.6  -3.25823   GTGCGTGTAGACCAA     GCGAACCAG-TTG-CG GCA CGACAAGCCGGCCCGC     CGGGTGATCAAGTCC  51 50
D558_RS03960  826459 ..  826471 -  -3.3  -2.72344   CTTCAGCGCGAACGA                TGCAC TGC GAGCA                CTGCGGCAACCGATG  41 435
D558_RS03945  823286 ..  823304 -  -6.7   -4.2558   CATGCGCCAGCAAAA            GCCGCAGG AAGC CCTG-GGC             GTGCTGGAAGACGTC  72 385
D558_RS03935 NONE
D558_RS03930 NONE
D558_RS03925 NONE
D558_RS03920  819553 ..  819576 -    -8  -3.17212   GGAGTATTGCAGCAA          CTGCTGGTGG ACAA CCCCCAGCGG           CTCTACTTTCAGAAC  57 50
D558_RS03905  816323 ..  816333 -  -6.8   -2.6796   CAATCGATAATCAAG                 CGGA CTC TCCG                 GAAGAAACCATGCGC  50 10
D558_RS03900 NONE
D558_RS03895  814592 ..  814609 -  -2.7  -2.77043   TTTAGGAGCGCAAAG             CGCCCGAT TCA ATCGAG-G             TAACGCAGGCCGGCC  39 16
D558_RS03890  813540 ..  813568 - -15.9  -2.59564   CTTTCACGTCAGAAT        CCCGGGAGGGGCC CAC GGCCCCTCCCTGC        CCTATCCCGGATTTA  84 38
D558_RS03885  812255 ..  812269 -  -2.8  -3.65991   AGCCCGGCAAGACAA               CGAG GAATGCT CTCG               GCGGCCGGGGCCGGC  52 62
D558_RS03880  811125 ..  811141 - -10.1  -3.37796   GGGCACCACCTACAA              CGGCAAC CGC GTCGCCG              GTGCTCCGCGTTTCG  67 350
D558_RS03865  807214 ..  807248 - -11.2  -2.71119   AGGCAGCGAGAGAAT     CCGGCCGCCGCGTGCG CAT CACGCCCCGCGGCCAG     CCGCGCCTTGCAGCA  66 9
D558_RS03845  802651 ..  802665 -  -4.9  -3.14132   TGCTGGGCCGAGTAA               GCGCG GTCAA CACGC               TGTTCATTGGCACCT  47 248
D558_RS03830  799051 ..  799061 -  -4.6  -3.54741   TACGACGCCGGCAAA                 GCGC TCA ACGC                 CGCTGCCAAGGCGCG  53 146
D558_RS03810  795764 ..  795805 - -16.6  -3.53091   ATCGCGCCGCGCAAA CCGTACGCCGCGACGACGGC GCCA GCCGCCG-CGCCGCG-ACGG CGATTTACTACCTGC  91 401
D558_RS03795  793777 ..  793805 -  -5.2  -3.73995   CTCCTCAGAAAAAAC        TCGGGCGCGC GAAATTACA GCGCGTCCAA        CGCCAGGTAACGGCG  58 11
D558_RS03790  792737 ..  792756 - -16.4   -4.8048   GGCCGACACGAAAAA            CGCCGGGG CGGA CCCCGGCG             TTTTTCGCTGCGACA 100 58
D558_RS03785 NONE
D558_RS03780  789070 ..  789082 -  -3.3  -3.73775   TCGACCCGCAGCAAA                TGCGC GCC GTGCA                GGCTTTCCTGCTGCA  54 310
D558_RS03760  783592 ..  783614 - -14.8  -3.14132   GGGCGCTGCCACTAA           CCCTGCCGGC GTC GCGGGCAGGG           GTCCTTCTTGAACCG  83 69
D558_RS03755  783243 ..  783255 -  -6.2  -3.19157   GATCAACGGCATCAA                GGCG AGATA CGCC                CGTCGGGCTCCTGGG  54 103
D558_RS03750 NONE
D558_RS03745 NONE
D558_RS03740  781792 ..  781806 -    -7  -2.89921   ACGAACCGCCAGATA               GCCCAG CGC CAGGGC               CACCAGAAGAAAGAA  53 67
D558_RS03735  779535 ..  779545 -    -4  -2.62184   TGTGTTTTCATATCA                 TTCA CTG TGAA                 AAACCCGGCATTTGC  42 16
D558_RS03730 NONE
D558_RS03725  776806 ..  776838 -  -3.9  -2.80816   GCCGCAGCCAGCAGA      GCCAGGGCCGTCATC ATC GACGCCGTCCCCAGA      AGCCCGCGCCACCCG  43 6
D558_RS03720 NONE
D558_RS03715  774868 ..  774878 -  -2.4  -3.57263   AGCGCGAGCCCCAAA                 CCTG CCG CCGG                 TATTCTCCACATCCT  47 46
D558_RS03710 NONE
D558_RS03705 NONE
D558_RS03700 NONE
D558_RS03695  772642 ..  772690 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 116
D558_RS03690 NONE
D558_RS03685 NONE
D558_RS03680  770310 ..  770323 -  -2.3  -3.58731   AAAACAGGGGCGAAA               CACCA TTTC CGGCG                GCTATAACTCGCCCA  47 27
D558_RS03675  769480 ..  769514 -  -2.6  -4.17762   CAGCCGGGAAAACAA     GGGCTCGGGGCGCA GAAAAAG CGCCCCCCATGCCG     CCCCTCATTTGCGCC  59 30
D558_RS03670  768952 ..  768979 - -16.4  -4.07687   AGCTGCCCGCCAAAA        CAAACGCCCACC GCAA GATGGGCGTTTG         TTTTGGGCCGTGATC 100 57
D558_RS03650  764572 ..  764592 -  -5.3  -2.71924   GACTGGGCCGCAAAG            GGCACGCAG TTG CTGGGTGTC            AAGGCCGTGATCACG  44 403
D558_RS03635  758804 ..  758831 - -14.8  -5.60993   GCGGCCACAAAAAAA        CCCCCGGCAGCC ACGA GGCTATCGGGGG         TTTCGGGCCTTGGCA 100 76
D558_RS03625  755204 ..  755214 -  -6.8   -3.5365   GGAAACGGTAGACAA                 CCAC ATG GTGG                 ACTTCCGCAATTCGG  57 139
D558_RS03615 NONE
D558_RS03610  753145 ..  753192 -  -5.4  -3.21276   TGCGCGCCGACAATA GCCCGCCGCTGGAGCCGCCGCC CAGCTC GGCGGCCGCCCC-GCT-CTGAC TCACAATATCATCTG  51 26
D558_RS03595  748003 ..  748015 - -10.5  -5.24989   GCACAGATGAAAAAA                GGGCC CTG GGCCC                TTAAAGGGACGCCGC 100 59
D558_RS03590 NONE
D558_RS03585 NONE
D558_RS03580  745188 ..  745226 -  -5.3  -4.25104   GCTGTCGGACCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  66 72
D558_RS03575  741997 ..  742010 -  -6.7  -2.93817   AATTTGGAAGAAGCA               GCAAC TGAG GTTGC                GTTGATGTATGTTCA  51 87
D558_RS03570  741785 ..  741819 - -21.7  -4.07687   ATGTTTTGCGCAAAA     CAAAACCCCGTAAGC GGATA GCTTACGGGGTTTTG     AGGAATAAAAGCCTG 100 36
D558_RS03555 NONE
D558_RS03550 NONE
D558_RS03545  735860 ..  735870 -  -2.4  -3.59979   CCGCCCGATCTCAAA                 TGGC TGG GCCT                 GCAGGTACGTCGTCA  50 198
D558_RS03490  724594 ..  724604 -  -8.2  -5.20534   ATGAACCAAGAAAAA                 GGGC TCG GCCC                 GCTCACCTATCTCGA  93 146
D558_RS03460  718629 ..  718644 -    -6  -5.65513   GATGAACCAAAAAAA              TGCCCC TTTC GGGGCT               GCCCTCGCGGACCGA 100 41
D558_RS03450  715722 ..  715736 -  -2.8  -3.62535   GGAAACATCAGAGAA               CTCC TCTTTCG GGAG               ATTGCATGGCCCGGC  49 143
D558_RS03445 NONE
D558_RS03440  713538 ..  713567 - -12.9   -4.4078   TTTTTCCAATGAAAA       TGAGGC-CCCTGTC ACT GACGGGGGGCCTCA       TCATAGCCTCACAGG  93 65
D558_RS03435  713136 ..  713154 -  -2.2  -2.83715   CGGAGGATCATCATA             CCCGCGGC TTA GCGACCGG             CGGCGGCGGCGCTCA  39 15
D558_RS03430  711918 ..  711934 -  -4.3  -3.59979   CCGCCGCACCTCAAA              CGCGCTC GAA GATCGCA              GCGATACCCTGGCCG  51 4
D558_RS03410  707140 ..  707174 -  -8.6  -3.09015   TCGACAGCGACGCAA    CGCCGGGC-GCCGTGA ATCCG TCACGCCAGCCCG-CG    GACGGGCTGACCGTG  57 162
D558_RS03380  700977 ..  701001 -  -7.8  -2.67579   AACAAGGTAAAAACC         CG-GCGCCTGG CTGG CCATGCGCACG          TCCTCACTCACGCAC  53 29
D558_RS03375 NONE
D558_RS03370  698966 ..  698976 -  -4.6  -4.07568   GTGCGTCGCGGAAAA                 CCGG CAC CCGA                 TATCTTCCTGTTTGC  64 279
D558_RS03355  694720 ..  694750 - -14.1  -3.82031   TGAAGGAGTACGAAA       TCCGCAAACAGGA AAATA TCCGGTTTGCGGA       AAAGCACGGCATCAA  88 501
D558_RS03340  687967 ..  688004 - -22.9  -4.08216   CTACGCCCCGGAAAA   CACCCCACAGCCTGGAC TGTC ATCCAGACTGTGGGGTG    TTTTTACGAGAACCC 100 43
D558_RS03325 NONE
D558_RS03320 NONE
D558_RS03315  681066 ..  681090 - -18.5  -3.78877   CATGAGAGCAAAAGA          TGGCGGGGGCG GCG CGCCCCCGCCG          GTTTACAACACAGGC 100 28
D558_RS03310  679602 ..  679625 -  -5.2  -3.28712   TTCGTCGGCGTAGAA          CTGGTCGCCG AGCG CGACGACAAA           ACCGCATTCGATCCA  49 285
D558_RS03290 NONE
D558_RS03285  676428 ..  676460 -    -4  -4.04318   TTGAGAGACGACAAA     TCCCGCGCCGCTCCC TTAC GGGACCAGCG-GGAT      CGACATCCTGAGGGT  60 76
D558_RS03280 NONE
        ectC  674689 ..  674708 -  -4.2  -2.98942   AGCCTCCTATATATA            GTCAGGCCG CCT CGGCTTG-C            GGCAACGCGTAAACG  44 7
D558_RS03270  673681 ..  673703 - -12.6  -5.60993   GCCCGTAGAAAAAAA           TCCCCGACGC CAA GCGCCGGGGT           CAAATGCGACCGCGA 100 65
D558_RS03265  672431 ..  672446 -  -4.6  -3.24232   TCGGTCTCAAATACA              CGCACG GTTT CACGCG               CCTGGTGCCGTCGCT  49 265
D558_RS03255  671765 ..  671786 - -15.1  -4.13995   GGTGGAGAAATGAAA           CAGGCGCCC TTTC GGGCGCCCG            CGATATCAGTCAGGA 100 31
D558_RS03250  670632 ..  670670 -  -9.5  -5.42862   ATATTTCGAAAAAAA  GGGTTGC-ATCCCGGTCG CGTG CGACCCGGATAGCCCCCC   TGTTTCCCGTACCTA 100 50
D558_RS03245 NONE
D558_RS03240  667837 ..  667872 - -21.4  -4.93547   GGAACCAAGTAAAAA    CCCCTGAAAGCTGGAT CCAT ATCCAACTTTCAGGGG     TCTGCTCAGCCAGGG 100 67
D558_RS03235  666849 ..  666897 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS03230  666282 ..  666320 - -12.5  -3.53012   GTGGCTGCCTGCAAA  CACCTGCAGCGGCG-CGAC CTC GGCGTCACCGCT-CAGGTG  CCAGCGGAAATCAAA  81 100
D558_RS03225  665694 ..  665707 -  -5.2  -4.31698   GCAAACGAAAAAACA               CCGC CCTCAT GCGG                AAGCTCCGCGGCTGC  69 18
D558_RS03220 NONE
D558_RS03215 NONE
D558_RS03210 NONE
D558_RS03205  661659 ..  661695 -  -5.8  -3.38812   GGCCGCGCAACAAGA   CCTCGACCCCCCGTGCGC AGA GAGGACAGGGG--CGAGG   CAACAACTCCTAATA  53 35
D558_RS03200 NONE
D558_RS03195  660257 ..  660270 -  -8.1  -4.57073   CACCTCCCGTAAAAA               CGCGT CAGT ACGCG                GAATAAAAATGTGTC  83 16
D558_RS03190 NONE
D558_RS03185  658624 ..  658641 -  -9.8  -3.67989   AAAAGCCCAGGGAAA             GCGGGC ATCACG GCCCGC              TGTCGACGGGACGCA  72 15
D558_RS03180 NONE
D558_RS03175  655636 ..  655659 - -18.2  -3.67792   CGAGACCGACGTAAA          CAGGGCAGCC TGAC GGCTGCCCTG           TTTGCTAGGCCGAGC 100 55
        rpsP  654727 ..  654745 - -11.7  -4.27117   GGCGCAGAAGACAAA             GCCACGC ACAAG GCGTGGC             CGAGTCCACAGCACG  93 209
D558_RS03165 NONE
D558_RS03160  653186 ..  653199 -  -2.3  -3.37612   CGTAACGGCAATCAA               GCACG GCTC CACGC                TATTCCGCGATGAAC  46 8
D558_RS03155  651876 ..  651901 - -11.2   -4.8622   CGCTCCAATGAAAAA         TCCCCCG-CTG GCAAT CAGACGGGGGA         TTTTTTTTGGTTCAT  95 37
D558_RS03145  648222 ..  648244 -  -4.8  -2.93045   ACTTACAGAGTAAAG           CAGCTATCGA ATA TCAACGGCTG           TGGATGTTGATCTCG  46 16
D558_RS03140 NONE
D558_RS03135 NONE
        ispG NONE
D558_RS03125 NONE
D558_RS03120  643292 ..  643302 -  -2.4  -3.84451   GGCCGGAAAGGGAAA                 TGCG CAT CGCG                 TTCAAGCTCCGGTCA  53 27
D558_RS03115 NONE
D558_RS03110 NONE
D558_RS03105  639662 ..  639672 -  -4.6  -3.06588   TTAAAAAACAAAGAT                 CACC ACG GGCG                 GCGCGATTCCGGGGC  47 45
D558_RS03100  639215 ..  639244 - -20.1  -4.26019   GAACCACAGCGAAAA       TGCCCGCCTGCACG TGA CGTGC-GGCGGGCA       GCAAGAGGTAAAGCT 100 53
D558_RS03095 NONE
D558_RS03090 NONE
D558_RS03085  635864 ..  635893 - -23.7  -3.54424   TTTGATGGGCGGAAA       CCACATCGGCGCC CGAG GGCGCCGATGTGG        TTTTCACGATTACTT 100 35
D558_RS03075  633799 ..  633847 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS03070 NONE
D558_RS03065  633268 ..  633287 -  -6.4  -3.80841   ACCATCACCATCAAA            CTAGGC-GC ATT GCAGCCCAG            CTTCAATGGCACGTC  62 81
D558_RS03055  631336 ..  631349 -  -5.9  -4.07568   CCTTGCCGCGCAAAA               GGCCG CTGC CAGCC                TGCTGGCCGAACTGG  66 494
D558_RS03045 NONE
D558_RS03040  629729 ..  629779 -  -2.6  -3.85698   GGCGCCGGCTACAAA GATGCCA-TGCTCTACGCCACC TACATCCCC GGCGGCA-AGGGCAATGGCAAC GTCTTGTTCGTTTTC  55 71
D558_RS03015  624789 ..  624807 - -13.2  -3.76224   CCTTCACCCACGAAA             CGCTCGAT CTG ATCGAGCG             GCGCATGGAAGAAAT  84 424
D558_RS03005  621715 ..  621733 - -11.7  -3.38812   GCCGCTGCAAGAAGA             CACGCCG GTGGT CGGCGTG             GTCTATGACCCCAAC  70 525
D558_RS02995  619215 ..  619232 -  -3.3  -3.53761   GAAGCCGTCCTCAAA             GCAGGTG CCAC CATCCGC              TGGCAAGCGGTGCTG  49 146
D558_RS02990  616855 ..  616878 - -19.6  -2.65448   GGAAACCTAAGGAAT          CGTGCCGGCC GGCA GGCCGGCACG           TTATCAGCGAGCCCG  95 29
D558_RS02985 NONE
D558_RS02980 NONE
D558_RS02975  614121 ..  614135 -  -4.2  -3.07291   AACGACCCGACCGAA               GCCAGA AAT TATGGC               TTAACTTGCCAGCTT  45 73
D558_RS02970  613975 ..  614000 - -13.3  -4.54727   CGCCCCAAAGCAAAA         GCGCCACGCAT TTGC ATGTGTGGCGC          TTTGCAAGCCCCTGA 100 63
D558_RS02965  612477 ..  612489 -  -4.8  -3.94891   ATACAGCAAAAAAAC                CGCA TGAAT TGCG                CTGCATACAACGGCA  62 166
D558_RS02960 NONE
D558_RS02955  610670 ..  610694 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 104
D558_RS02940  608873 ..  608892 -  -2.8  -4.56597   GGGCTGGCCCAAAAA            GACATCCAG ATA CGGGATG-C            GCAATATGCCTTTTG  69 139
D558_RS02935 NONE
D558_RS02930  605271 ..  605287 -  -4.3  -5.52986   ACGTCATGAAAAAAA              CCACAGG CGG CCTGCCG              GTCATCTTCGACGTC 100 304
D558_RS02895 NONE
D558_RS02890  590591 ..  590623 -  -7.8  -4.11216   GCCCGACGCGGAAAA     TGACCCGCAGGGC CCGTCCAC GCCCT-CGGATCA      GCCGCGAGCCGCCTG  74 43
D558_RS02880  589407 ..  589425 -  -8.8  -3.85698   GCCGCGCGGGATAAA             CCCCGACG CAG CGTCAGGA             TACAAAGCGCAATCA  72 45
D558_RS02875  589087 ..  589101 -  -2.1  -3.59262   TGTCAGAGGCGGAAA              TGCGCG GCCA CG-GCA               GCCAGGAACGCCATC  47 54
D558_RS02870  587035 ..  587051 -  -4.3  -3.14132   CCGCTGCTCTACCAA              CTGAGCT AAC AGCCCGG              CGCATGCAGTGTTAT  45 208
D558_RS02865  586927 ..  586946 -   -15  -5.04601   CCCAGAAAGCAAAAA            GCCCACCG CAAT CGGTGGGC             TAAGTGCTTGATACT 100 53
D558_RS02860  586435 ..  586459 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 121
D558_RS02830  581390 ..  581409 -   -15  -3.75153   GCGCGCCAATGCAAA            GCGGACCC CGCA GGGTCCGC             TTCCCGGGCCGGCCG  95 62
D558_RS02825 NONE
D558_RS02820  579470 ..  579488 -  -4.5  -3.49778   AAAACGGATGAAACA             GATACCG TAGGT CGGTGTC             GCTCAAAGGATGGCC  53 28
D558_RS02815 NONE
D558_RS02810 NONE
D558_RS02805 NONE
D558_RS02800  575981 ..  576013 -  -5.6  -3.25823   GTGCGTGTAGACCAA     GCGAACCAG-TTG-CG GCA CGACAAGCCGGCCCGC     CGGGTGATCAAGTCC  51 50
D558_RS02795  575337 ..  575349 -  -3.3  -2.72344   CTTCAGCGCGAACGA                TGCAC TGC GAGCA                CTGCGGCAACCGATG  41 435
D558_RS02790 NONE
D558_RS02785 NONE
D558_RS02780  573106 ..  573116 -  -2.4   -3.4072   CACCCCCGACGACAA                 GCGC GAT GCGG                 CGGCCATCGAAGCCT  45 336
D558_RS02765 NONE
D558_RS02755  569409 ..  569464 - -14.9  -3.63922   AGGCCCGGTAAAACA CGGCTCTTG-GCCATGAAAGAAGGGGC TTGC GCCCCTTTTTTCATGGCGCAGGTG-CG TTTTACCGGCCGAAC  95 28
D558_RS02735 NONE
D558_RS02730 NONE
D558_RS02725  562230 ..  562241 -  -5.8  -3.17212   CCAGTACCGCACGAA                CGCT GGCC AGCG                 CCGCAAGTCCGCCCT  49 300
D558_RS02680 NONE
D558_RS02675  553334 ..  553344 -  -8.2  -2.92668   TACCATTGAACTACA                 CCCG CAT CGGG                 AGGCTGGCGCTGCAA  56 114
D558_RS02670  553063 ..  553073 -  -8.2  -2.64243   CTAGATGGGATAGGA                 GCCG CGT CGGC                 TTCAGAGCCGACCTT  53 216
D558_RS02645  547469 ..  547486 -    -4  -3.53012   CTTTCTTGGTGTAAA             TGCGCG GACAAA CGCGCC              GCTGTTTTGCCTCGA  51 56
D558_RS02640  546413 ..  546426 -  -2.3  -2.80816   CCTGCACTGATCATA               GTGCC AATC GCCAC                CTGGTGATCATCCAG  39 7
D558_RS02635  545673 ..  545699 - -14.5  -5.75945   ACCCTGCAAAAAAAA        CCGGCCAGCTCA ACAG TGAGC-GGCCGG         TCTTTCACAGCGGTG 100 61
D558_RS02620 NONE
D558_RS18075  542677 ..  542691 -  -3.4  -3.07994   CGCAAGCTCATTCAA               CGAGGC GTG ACCACG               GGTGTGGGCCGGGCG  43 170
D558_RS02585  534356 ..  534370 -  -9.2  -3.86897   TTTAGCGCCTACAAA               GCCAGC GCC GCCGGC               AGCGACTGAGCCGGA  75 41
D558_RS02575 NONE
D558_RS02570  531329 ..  531340 -  -7.2  -4.78848   CGGCCAAACAGAAAA                GGCC GGCG GGCC                 GTCAGCGTTGCAGGC  84 151
D558_RS02560  529279 ..  529289 -  -6.8  -3.16603   ATGATACTAAAACGA                 GTCG CGG CGAC                 GTTGTCTCTCAATAA  54 6
D558_RS02555  528352 ..  528378 - -11.6  -5.39721   GCACGACATAAAAAA         GGCGTGAGCC CGATGTC GACTCACGCC         ACGGCCTCAAGAGGC 100 67
D558_RS02550  526930 ..  526951 -  -6.5   -3.2178   TCATAGGACAATATA           GCAC-GCGGC AAT GCCGCCACGC           GGCCACGACTTTCGG  54 45
D558_RS02545  525968 ..  525992 -  -6.3   -3.0894   CAATGAGGCAGCGAA          CAGCAACGTGC CCA GCACCATGCCG          ATACCGCAAAGAGAA  52 129
D558_RS02540  524338 ..  524362 - -10.8  -2.69449   CTCCAGACAAGGAAT         GGTCGACATGC TAGC GCATG-CGACC          CGCGCGGCCGACACG  62 44
D558_RS02535  523553 ..  523566 -  -2.3  -3.36327   CCACGCCAGCCAGAA               CCACG GGTG CGTGT                TTGCCGACCACTCTT  46 74
D558_RS02530  522172 ..  522191 -  -7.8  -3.91897   TCTGGTAGGGATAAA            GGCC-GCAC TGC GCGCAGGCC            TGGGCGTGACGGCAC  67 219
D558_RS02485  511741 ..  511768 - -11.2  -3.38581   ACGAACCCTCAAAGA        CGGGCAGCCCCC ACAC AGGGGCTGTCCA         CAAGCAACAACGTCC  73 74
D558_RS02480 NONE
D558_RS02475 NONE
D558_RS02470 NONE
D558_RS02465  507076 ..  507125 -  -4.9  -4.11216   TGGCGATCCTCAAAA GCACTGCCCGTATTGTGCGCGGCG AGC CGT-GCACACGATAGGGCCAGTCC AGGTCTTTTGGCAGG  64 67
D558_RS02460  506380 ..  506404 - -13.6  -3.05384   CGCGCGGCCATGCAA         GCGCCGC-CAG ATAG CTGCGCGGCGC          GGTGCGCCGCTAGTC  79 35
D558_RS02450 NONE
D558_RS02445  504011 ..  504031 - -11.1  -2.86124   TTTAGGGAAACACCA            CGGGGCG GGGGTTG CGCCCCG            CCTGCCGTCAGGCTT  66 33
D558_RS02440  502788 ..  502798 -  -2.4  -3.07043   TGCACGATCTGAACA                 TCGC ATT GCGG                 CACGCCGATCACGCC  42 202
D558_RS02420  499769 ..  499802 -  -7.3  -2.72344   TGGCAGCCGCAACGA     GCCCGGT-CGGCCAAG CAT CGTTGCCGGACCCGGC     GTGGCACCGGGCGTG  51 519
D558_RS02405 NONE
D558_RS02400  496851 ..  496867 -  -3.5  -3.05816   GCATGTCCGACCCAA              CGGCGGC ACT GCGTCCG              GACGGATCAGGACGA  43 32
D558_RS02395  495743 ..  495775 -  -5.4  -3.55622   CGCAAGCCGCGCAAA      GCACCACGGTGACC AACAA GGCCGCCACGCTGC      GCTATCTGGCGCGCT  53 108
D558_RS02380  493365 ..  493378 -  -2.3  -2.93853   CGGGCGCAAGGAAAC               GGGCA TGAC TGCCT                CCAACGAGTGCTGAC  40 91
D558_RS02375 NONE
D558_RS02370  492078 ..  492096 -  -8.8  -3.31461   CACTGATGCCGACAA             GCGCCG TAGCTCG CGGCGC             TTTTTTTCAGGCCAG  63 32
D558_RS02355  488333 ..  488343 -  -8.2  -2.77344   GCATGCCTTAAGAAG                 GCCG CTG CGGC                 TGGACCACGACGCCG  54 7
D558_RS02350 NONE
D558_RS02345  482714 ..  482728 -  -4.2  -2.75183   ACCCCTATGCAATGA               GCGGTA TTT TATCGC               GTCGCCGCCAGGACC  43 58
         dcd  481892 ..  481909 - -11.3  -2.88249   GATATGGGGCATATA             CGTTGCG CCCG CGCAACG              CAACCATGGGCTGGG  64 243
D558_RS02330  480906 ..  480931 -  -5.3  -2.77861   GCAAGGCAAAACGGA         CGCGAGTGTAC TTCG GGACACCCGCC          TGAAATAGTCAGACG  47 179
D558_RS02325  478547 ..  478563 -    -5  -2.62184   CGGCCGCGCACATCA              TGCCGG CCGCC CCGGCG              CCTATTATCGCAACG  43 63
D558_RS02320  477015 ..  477031 -  -9.3  -4.11692   CAGGGATGCGGAAAA              CGCCCGG TAG CCGGTCG              GGTTTCCGCCCCTCT  80 387
        gcvT  475820 ..  475861 - -16.6  -2.81208   GGGTATGGAAAAGAT GTGCGCGCCTTGCGCGCGG GATGG CCGCGCGCAAGGCT-GCAG TTTACGAGTGTTCGA  87 27
D558_RS02310  475363 ..  475393 -  -4.4  -3.04398   GGTGTTCTCGAAAAT       TCGGGGGAGGCGCG GGC CGCGGCCCGCGCGG       CCGGTCAGCCGTTGG  47 30
D558_RS02305  472421 ..  472446 - -20.5  -4.72272   GCCGCGCATGAAAAA         GGCCCCTGCTC TTGC GAGCAGGGGCC          TGGCTCAGACCGTCG 100 53
D558_RS02250  455887 ..  455910 -  -5.2  -4.41616   ATGCCTGGAAAGAAA          CCTCGCGC-GC GGC GCAGCCCGAAG          AAAACGGCTACCGCT  70 82
D558_RS02230  452785 ..  452808 - -16.8  -5.96521   ATGAACCAAAAAAAA          GCCCGAGATC TAAC GATCTCGGGC           TAAATCCACCAAAGG 100 458
D558_RS02220 NONE
D558_RS02215 NONE
D558_RS02210  447653 ..  447665 -  -4.8  -3.51232   GGGCTTTCAAATCAA                CGCA GAAAT TGCG                TGTACCAGGGCATGG  53 9
D558_RS02205 NONE
D558_RS02200  445181 ..  445192 -  -7.2  -3.63515   CTCTAGGTCGAAGAA                CGCC CGAG GGCG                 TCGTCAAAAAGTTTT  60 1
D558_RS02195 NONE
D558_RS02190 NONE
D558_RS02185  440993 ..  441003 -  -4.6  -2.68942   ACGTCGGGAGAGAAC                 CGCC ATC AGCG                 TTCTCCAGCGATGCG  43 20
D558_RS02180  439512 ..  439531 -  -6.4   -3.1506   AAATCCTTTGATGAA            GCGCTG GTCGAATG CAGCGC             TTTGACCAATGATCC  51 344
D558_RS02165  436008 ..  436025 -  -4.9  -2.98823   CCCGGTCGATAGATA             GCGTCCTA TTG TAGGA-GC             TTCCGACTCAACTGG  46 33
D558_RS02160 NONE
D558_RS02155 NONE
D558_RS02150  432503 ..  432514 -  -2.2  -3.87815   GGTTACCGCCACAAA                GACT TTAT AGCC                 GTTTGTTTATGGGCG  53 54
D558_RS02145 NONE
D558_RS02140  430538 ..  430555 -  -3.3  -5.93809   GGTGGAGAAAAAAAA             CCGGCCT CATT ATACCGG              CGGGGTCTCCTCCGA 100 17
D558_RS02135  429726 ..  429750 - -11.3  -2.63715   ACCCAGTCCACATGA          TGTCGGCGGAC ACA GTCCGCCGGCC          ATGAAAATACTCAGC  66 36
D558_RS02130  427721 ..  427757 -  -9.4  -3.53012   CTGCTCGCCTGTAAA   GCACGCCAGGCGC-CGA GGTC TTGCACGCCTGCCGTGC    AAGACCTTTTTTATT  69 52
D558_RS02115  423880 ..  423898 -  -8.8  -2.83164   TGAGCGACGAGCAGA             GCCGCG AAATGAA CGCGGC             TCTCATTCTTGTTCT  55 116
D558_RS02085 NONE
D558_RS02080 NONE
         ipk NONE
D558_RS02070  417426 ..  417466 -  -2.6  -5.79595   CCGCAAAACAAAAAA GCTGCTGAACCTGAGCC AGTCTGAA GGCGGAG-TTCAACAGC  TTTTTTATGTATTGG  89 43
D558_RS02065  416334 ..  416357 -  -6.7  -4.07568   CCCGCCTGTGTAAAA          CACGCCAAGC GACAT GCC-GGCGTG          GCATTGGCCCATCGC  66 75
D558_RS02060  415631 ..  415659 - -16.7   -5.5208   TTAGAACATAAAAAA        CCCTGCGCTTGCA ACT CGCAGGCGCAGGG        TTGGAGGCAGCAGCG 100 62
D558_RS02055 NONE
D558_RS02050  414229 ..  414240 -  -3.6  -2.52516   CTGCCCATGATCAAT                CCGC GAAA ACGG                 TGATTTTACCCGGTT  41 69
        ychF  412940 ..  412959 - -13.6  -5.45802   CCGCCAAAAGAAAAA            GGCCGCAT CGAT ATGCGGCC             TTTGTGCAGCGCGGG 100 87
D558_RS02040 NONE
D558_RS02035 NONE
D558_RS02030  410981 ..  410991 -    -4  -2.99142   GGTAGCAACAAGAAT                 CATT ACT AATG                 GAGTCGCATCAACGG  44 84
D558_RS18070  410372 ..  410385 -  -3.7  -3.57462   CACCTCATCGCTAAA               CCGCG TCTA CCCGG                ACTTGCGTCCCACGC  51 18
D558_RS02025  408452 ..  408463 -  -3.6  -3.53012   GTGGGGCGCGGTAAA                CGCC GTCT GGCA                 CTTCTTATTTTTCGG  51 122
D558_RS02015 NONE
D558_RS02010  404861 ..  404895 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 214
D558_RS01995 NONE
D558_RS01990 NONE
D558_RS01985  399827 ..  399848 - -10.9  -2.71712   TGTCTGCGCTCAAAC           CCACAGTCA ATTT CGACTGTGG            CTTGCCGATGGCCCA  62 432
D558_RS01965  395604 ..  395644 -  -5.9  -4.07568   CTGGTGTTCGGAAAA  TCCGCCGGCACGGTGAC CGAGTAT GCCAACGAGCCCGCGGT  GCTGACGCAGATCGA  66 416
D558_RS01950 NONE
D558_RS01945  391171 ..  391198 - -11.2  -3.01712   CGCCGTGGCCGAACA        CGCGGCCCC-GGC CTG GCATGAGGCCGCG        CGACAGCGCGTAGCG  65 197
D558_RS01910  383414 ..  383438 -    -2  -3.60792   GTGCCAATCGGTAAA          GTTGGACGAG TTGCT CCAGGCCAAC          CAGCCCTTGCTCACC  50 456
D558_RS01885 NONE
D558_RS01880  375201 ..  375218 -  -7.7  -2.89742   GCGAAGGCTTAGACA             GGCCAGCG CAC CGCTG-CC             ATATCGGGATGCACT  56 1
D558_RS01855  371150 ..  371166 -  -2.1  -4.07687   AGGCGTTCTGGAAAA              GCTAGGC ACG GCGTGGC              GACTCAGGTGCGCGG  56 81
D558_RS01825 NONE
D558_RS01820  364094 ..  364123 -  -5.7  -2.78384   GTTCGTCCGATGAGA       GGCCAGACTTCGGG CGC CTCGAAGTCTG-CT       TTCCTGTCTAACGAA  47 81
D558_RS01815  361576 ..  361588 -  -6.2  -4.13767   CGCCTGACCGGAAAA                GGGG GAGTT CCCC                TTTTCCGCCTGCTGC  69 43
D558_RS01800 NONE
D558_RS01795 NONE
D558_RS01790  357587 ..  357618 -  -5.6  -3.21726   CGCGATAAGATCGAA      CTCGGAGGCCACGG CCGG CCGATGCCTCAGCG       GCGCTGCTGGGCCGC  51 20
D558_RS01785  356609 ..  356622 -  -3.7   -3.6715   CGATTCAAGCTCAAA               GCGGG CATG CCCGG                GATGGTATCAGGCCA  54 33
D558_RS01780 NONE
D558_RS01775  355475 ..  355496 -  -9.3  -3.16564   GCGTGAGGCGATCAA           CGCCGTCCG TTGA CGGCCGACG            GCGCGTCGCCTAGCA  64 35
D558_RS01705 NONE
D558_RS01700  338600 ..  338618 -  -7.3  -3.41051   TTAGCGGCATGACAA             GCCCCGC GTTTG GCGTGGC             CACCGCCAGTATGTT  58 507
D558_RS01665 NONE
D558_RS01660  329361 ..  329400 -  -9.9  -3.61404   CGATCAAGGAGAGAA CGCCGCC-GCGCCCGGACA AACC CG-CCGGGCGCTGGAGCCG  ACGGATCGCGCCGAC  68 207
D558_RS01650  325331 ..  325347 - -10.8  -4.72986   CATCCCCATGAAAAA              CGCCCC GTGAA GGGGCG              TCGAGAGCGTCAGAC  95 47
D558_RS01645 NONE
D558_RS01640 NONE
D558_RS01635  321156 ..  321174 -  -4.5  -3.96705   GGGAGAAAATCGAAA            CGGC-AGC TCGC GCCAGCCG             TCAACGTAAATCAAC  62 26
D558_RS01630  320092 ..  320102 -  -6.8  -3.70902   CGCTGGATATGGAAA                 CCAG CGC CTGG                 CTGTCAAGCATGGCG  63 61
D558_RS01600  313891 ..  313935 -  -9.9  -3.14881   CAATGGCGCGAGCAA GGCGCCGTCAGCCGCAAAG GAAAACG CTTTGCGGCCGCCGGCATG GCCCTGGGCTATCTG  60 157
D558_RS01590 NONE
D558_RS01585  312335 ..  312364 - -11.3  -2.87136   GCAGCAACCACGACA       GCCAGCGCCACCG CCGT CGCCGGCACCGGC        AAAACCCCAGCGCAC  68 3
D558_RS01580  310574 ..  310596 -  -4.1  -4.90002   GAACATAGAAGAAAA          GCCG-TCAAG TTTC CATGAGCGGC           ATGACTATCGGTTGG  78 165
D558_RS01575  308309 ..  308325 -  -7.2  -3.09834   GACCCCATTATCGAA              CGGCAC TCGCT GCGCCG              CATTCTGCCGCAATG  51 308
D558_RS01565 NONE
D558_RS01560  304596 ..  304643 -  -6.2  -3.79445   AAGTATGAATGCAAA CATGGCAGCTCA-CTGCAAGGCG CGG CAGCTCGCAGGCAAGCCGCCGCG CATCAATCGATGCCG  64 42
D558_RS01555 NONE
D558_RS01550 NONE
D558_RS01545 NONE
D558_RS01540  300409 ..  300455 -  -6.3  -3.70902   GTCCTCACATGCAAA TGGGTGGCCCCGGCGCCCG GATTCTGGG CGGACGCGGAGGCCTGCCC GATACGGCTGCGCAA  60 292
D558_RS01530  299175 ..  299186 -  -7.2  -2.82516   TTTCTCAGGACGACA                CCGC AGTG GCGG                 GCCGACGGCGCAAAC  51 3
D558_RS01525  297359 ..  297378 - -13.6  -2.71263   AAGTCTCCGCAAGGA            GGAAGGCC CGCA GGCCTTCC             CTTCAGGCTTATTTA  76 38
D558_RS01520  296759 ..  296772 -  -3.9  -3.14344   CATTTTGCGTATCAA               GAAAT TAAA ATTTC                TTGCAAGTTGGGCAA  45 60
D558_RS01515  296350 ..  296372 -   -17  -5.54192   ATGAACCCAAAAAAA           GCCCTGCGCA TGC CGCGCAGGGC           TTTTTTTGTATGGGG 100 43
D558_RS01485 NONE
D558_RS01480  288211 ..  288248 -  -4.7  -2.57132   CGGCTGCTGGACAAC   CTGATCGGCAACGCCTTG CAC CACGGCG-CGCCGCCCAT   CGACGTCCGGCTGCT  43 297
D558_RS01465  284878 ..  284894 -  -2.1   -4.7416   GCAAAACGCTAAAAA              CCCAGCC AAT GACCGCG              CATGAATGTCTCGAC  70 2
D558_RS01460  282615 ..  282632 -  -4.1  -3.75629   TACGCCGAAGTCAAA             GCCAATG GCCG CATCGAC              ACCGAGGCCGCCGGC  56 328
D558_RS01450  281577 ..  281589 -  -5.5  -3.44848   GCTTGTTAGGAAACA                CCAAG CAC CTCGG                AAGGAAATCAAAGAA  53 48
D558_RS01445  280595 ..  280628 -  -2.2  -4.64676   GCATCGGCAAGAAAA     CGGCCGAGCGCCTC TTACTG GAGATGCGCGGCAA      ACTGGGCGCAGATAT  70 210
D558_RS01400  273364 ..  273374 -  -8.2  -2.56728   ACGACGGACACCAAG                 CCGC CTT GCGG                 ATACTGGCGCAGGGC  53 412
D558_RS01390 NONE
D558_RS01385  270912 ..  270960 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS01380  270445 ..  270456 -  -2.2  -2.98387   TTGCAGAAAATATGA                CCTG CCCC CAGA                 TTTAGTACGGCACCG  40 27
D558_RS01375 NONE
D558_RS01370  268660 ..  268676 -  -4.3  -3.74747   CGAACCTCCAGGAAA              CCTGAAC GCT GCGCAGG              GCCGCCACGCAGCGG  54 58
D558_RS01365  267759 ..  267773 -  -2.1  -4.32177   TGACTCCAGAATAAA              CGTCTG CGCT CAG-CG               GCGCATCATCGACTG  62 31
D558_RS01355  265231 ..  265246 -  -8.2  -2.82516   GGCCGCAGGAGGACA              CGCCGG TTTT CCGGCA               GGCCCCTTCCCGGCT  55 107
D558_RS01335 NONE
D558_RS01330  261893 ..  261905 -  -4.8   -3.7282   GGACTTGAGCAATAA                CGGA TGAAG TCCG                AATTCGGCGAAGGTG  56 81
D558_RS01325  260415 ..  260441 - -13.7  -3.40867   GCAGGCATGAACGAA         TCAAGGCCGCC CTTGC GGCGGCCTAGA         CATGCCATGGTTCGA  83 100
D558_RS01315 NONE
D558_RS01310  258286 ..  258311 -  -3.1  -3.57462   TATCGTATTGTGAAA         TTCGGGCCGCC ATTT GGCAACCCTTA          TTTGTAGGCCCGCGA  49 49
D558_RS01305  257274 ..  257298 - -11.4  -3.18264   CGCTTTACCCATGAA          CAGCCTCTGC TCTGC GCAGGGGCTG          TTTTTCCTGGGAGGC  71 118
D558_RS01295  254619 ..  254659 -  -5.5  -3.25823   TCTCCTTCACATTAA TTAG-GATGGGCC-TGGCC TTACT GGCCATGGCCGACCACCAA ACGGGCGCGGACCTG  51 106
D558_RS01290  253872 ..  253892 - -18.3  -5.96521   ATGAACCAAAAAAAA            GGCCACCCG TAT CGGGTGGCC            TTAATTCCAGCTCTG 100 152
D558_RS01240  246216 ..  246235 -  -5.6  -3.28712   GCTTTCGTTGGATAA            GC-GCGGCC GCT GGCGGCTGC            ATCCTGATCAGGGCG  51 479
D558_RS01195 NONE
D558_RS01190 NONE
D558_RS01185  236862 ..  236873 -  -3.6  -3.01924   CACTCGCGGGCAATA                CCCC AACC GAGG                 TCTCCGGCCGCACCG  42 75
D558_RS01175  236165 ..  236175 -  -2.4   -4.0174   AATACAACCCACAAA                 TCGG CCA CCGC                 TATACTGCGGTGTAC  56 25
D558_RS01170  234997 ..  235020 - -12.4   -4.7254   AGGCCGGACGAAAAA          GAGCCAGGCC GAAT GGCCTGGCTG           GAAAACAGCGCGACA 100 91
D558_RS01130  226830 ..  226840 -  -4.6  -4.86862   TTCAAAAAACGAAAA                 CCCC TGC GGGA                 ATAGCTCAGTTGGTA  81 127
D558_RS01120  225568 ..  225597 - -22.3  -3.63627   CCCTGATACGCCAAA       GCAAGAAGCCGGC ACGC GCCGGCTTCTTGC        TTTGTGGACGGTCAT 100 37
D558_RS01105  223523 ..  223539 - -10.8  -5.71983   TGAACCACAAAAAAA              CCCGGC ACGAG GCCGGG              TTCAGTGCGGCACCA 100 46
D558_RS01095  222179 ..  222227 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS01090  221609 ..  221627 -  -3.9  -3.53563   AGAGCCTTCTTCAAA            CAACTGCC AACA GG-AGTTG             CCCAGCAGATCCGGG  51 381
D558_RS01070 NONE
D558_RS01065  216048 ..  216070 -  -8.5  -3.41962   GTGCAATAGACAATA           CTTACACAC GCCAT GCGTGTAAG           AGCCGTATTCAGTTT  64 48
D558_RS01060  215748 ..  215770 -  -9.1  -5.61824   GAAAAGGCAAAAAAA           GACCAGGGC ACAGG GCCCTGGTA           CCTTATTTTTTGCGG 100 28
D558_RS01055 NONE
D558_RS01050  214697 ..  214719 -    -4    -3.049   TAATCGAAAGAATCA           CAGTCCCAGC CTA ACTGGGGATG           ACCGCAGGGTTTTTC  45 39
        dnaK  212660 ..  212702 - -18.5  -3.27298   GTTCTGAATCATCAA CGCG-CGCGCCCGGTAGCTG GAAT CAGCTACCGGGCGTATCGCA CGTCATCGTTCGGCC 100 42
D558_RS01040  211376 ..  211405 - -22.3  -2.88249   GACATCCGCGACAGA       GTGTGCCTGTCCC CGCT GGGACAGGCACAC        TGCTCTACGCCATGA 100 93
D558_RS01030 NONE
D558_RS01025  207416 ..  207447 -  -7.9  -3.85864   CGAGCACTACAACAA      GGAGGCCGGCGCGG TCTGG CTGCGCCGGC-TGC      TCGACGCCTGGCCCA  67 186
D558_RS01010 NONE
D558_RS01005  204590 ..  204618 - -16.7  -4.38712   CCGAGCGCTAGAAAA        GGAAAAGCCCCCG GAT CGGGGGCTTGCCC        GGCGCCGCCGGCGCC 100 43
D558_RS00995  202642 ..  202666 - -11.4  -5.02074   CCATTCGGCAAAAAA         CCCGCTACCCC CATA GGGGC-GCGGG          TTTCTCGGCTGATGC 100 60
D558_RS00990  201447 ..  201464 -  -3.3  -2.74864   TGTAGAAGCAAATAC             CGGACCG GCCT CAACCCG              AAACGGAATCCCACA  41 83
D558_RS00985  200122 ..  200146 -  -8.6  -3.02144   CTACGCGGGCGAATA         GCCGC-C-CAGC TAG GCTGCGCGCGGC         GCGGTCAGCGCCAGC  60 10
D558_RS00955 NONE
D558_RS00950  188762 ..  188796 -  -7.8  -2.58999   CGCCCACAGACCAAT     GGCAAGGCCGAACG CTTCATC CAGTCGGCCTTGCG     TGAGTGGGCTTACGC  50 191
D558_RS00925 NONE
D558_RS00920  182824 ..  182844 -  -3.3  -3.05596   CACGGGCGGATCCAA           CG-CGCAT TACACC ATGCGGCG            GCCTTGGCCCGCAGG  43 74
D558_RS00915 NONE
D558_RS00910  180004 ..  180021 - -11.3  -4.98531   CGCCGAAATGAAAAA             CGGAACC CGCG GGTTCCG              TTTCTGGTTCACGTG 100 54
D558_RS00905  179365 ..  179380 - -11.8  -5.33921   AAATCAATGAAAAAA              CCGCCC GGAT GGGCGG               CCTTTTTTTGCGGCA 100 168
D558_RS00885  176653 ..  176701 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS00880 NONE
D558_RS00875 NONE
D558_RS00870 NONE
D558_RS00865  175007 ..  175030 -  -8.8  -4.07246   CCACCCCAAACGAAA          GCCCTATCGC GTTG GCCACAGGGC           TTTGTTGCTGGCGTT  75 114
D558_RS00855 NONE
D558_RS00850 NONE
D558_RS00845  170487 ..  170497 -  -6.8  -2.71712   CCCTTGTGCTGAAAG                 TCGG CGG CCGA                 TGAAGACTGCGCGGC  51 63
D558_RS00840 NONE
D558_RS00835 NONE
D558_RS00830 NONE
D558_RS00825 NONE
D558_RS00820  165739 ..  165770 -  -7.8  -4.50976   GGCCACACGAGAAAA      GCCATGCAGACCGC GTAC GCGGTAAGCGCGGC       GCGAACCGCCGCCGG  81 333
D558_RS00805  162268 ..  162318 -  -4.6  -3.60296   CATTCCTATTGTAAA GCCCTACCCCGGCGG-CGACC TTAGCTCCCC GCTCGGCCGCGGGGGTATTGC CGCGCCCGTTCAACC  53 35
D558_RS00800  161519 ..  161542 - -18.2  -3.75153   TCGGCGCAATGCAAA          GTGGGCCCCA CACG TGGGGCCCAC           TTGCTTTTCAGACCT 100 33
D558_RS00790  158611 ..  158622 -  -2.2  -3.31144   TTCCTACCCGGACAA                CGCT CATG AACG                 ACGATTCCAATGCAG  44 57
D558_RS00785 NONE
D558_RS00780  156567 ..  156582 - -11.8  -5.86332   TGAACCCAAAAAAAA              CGCCGC GGAT GCGGCG               TTTCCTGGCAAACCG 100 53
D558_RS18065  153284 ..  153326 - -10.5  -2.73159   TGAAGCCCGTCAAAT TCGGCGAACGCCCTGGATGC CCCG GCATCC-GAGCCAACGCCGA GCCAAGCCCAGGCCC  63 487
D558_RS00755  151794 ..  151837 - -10.3  -3.93984   AAAGCTATTCACAAA TGGTGAA-GTCCGGTCGGCC AGAAA GGCCCACCAGACACTCGCCA AGATGAGGCGCAAAG  77 138
D558_RS00750  150996 ..  151007 -  -2.2  -3.02074   CAAAGACATTACAGA                CTCC GAAC GGAA                 ACTTTAGTTTGCGGC  41 29
D558_RS00745  150503 ..  150546 - -25.6  -3.64703   GCTCCCGCAGTCAAA CCCAATAAAACAACGGCGCC CTTG GGCGCCGTTGTTTTATTGGC CAGGCCGATTACTTG 100 34
D558_RS00735 NONE
D558_RS00730  147135 ..  147151 -  -2.2  -3.29144   CCATGGCGGCCAGAA              GCCC CATGCGAGT GGGC              TTGCCGCGCAGAGGG  44 41
D558_RS00725 NONE
D558_RS00720  145427 ..  145445 -    -3  -2.88231   ATGACAATGACGACA             GGGCGC TACCGCG GCGCCG             TACCCGACCCATTAC  42 37
D558_RS00715  143633 ..  143646 -  -2.3  -4.43844   CCACTAGCGACAAAA               CGCCA TTGT TGGCC                GCGTTGCGTGAGTGC  65 134
D558_RS00705 NONE
D558_RS00700  141326 ..  141344 -  -7.4  -2.64144   TTTGGACGGAAACAC             TTCGGCAT GAC AGGCCGAA             CCCAGTGTCAGAGCC  50 108
D558_RS00695 NONE
D558_RS00690 NONE
D558_RS00685  139403 ..  139427 - -12.1   -5.4505   GCGGGCAACAAAAAA          CCCGCGTCTCT AAG AGAATCGCGGG          TTTTTGCAATTGCGT 100 56
D558_RS00655 NONE
D558_RS00650 NONE
D558_RS00645  131894 ..  131933 - -13.7  -2.82933   CCTCAACGGACTACA  GCGGCCGCCTGAACAGAA GCGGT TTCTGCCCAAGCGGCC-C  TACCGTGACCGCACC  76 94
D558_RS00640  126494 ..  126543 -  -8.3  -2.55074   GCGAAGCCGAAGTGA CCTGGGC-GCGGCGCGTCGTGCAG GCG CTGGCCGACGCGCCGCTGGGCGCG GTGGCCGTCGACGGC  53 144
D558_RS00590  113986 ..  114008 -  -9.1  -2.80622   ATACAGCGCATGACA           TCCCCGCTG CAAGC CAGCGTGGA           GTTGCGCTGGACGGA  58 124
D558_RS00580  112591 ..  112617 - -14.5  -5.41143   GACCGGGCAAAAAAA        GAGCCCTGGAGG CAAG CCTCCAGGGC-C         AACTCGAGGTTCCTA 100 154
D558_RS00555 NONE
D558_RS00550  108178 ..  108190 -  -4.9  -3.75024   TTTTATCATGAATAA                TAAGA TTA TCTTA                TTGATTCAACATTCT  56 105
D558_RS00545 NONE
D558_RS00540  106748 ..  106772 -  -4.2  -3.27951   GAGTCGAGTACAACA         CCGATCG-GCC TCAC AGCGCGCTCGG          ATATTTAACGCCGGC  47 91
D558_RS00530  104584 ..  104610 -  -3.8  -3.73775   TCGATGCGCATGAAA        TCATCG-ATCG TGCGCG CGACGCGATGA         TAGGTATTCGAATCA  54 59
D558_RS00525 NONE
D558_RS00520 NONE
D558_RS00515  101289 ..  101307 -  -6.6  -3.19522   GGAGCCAACAGGCAA             CAGCACGC TCT GTGTGCCG             GGCTTGGCGCGCAGG  54 455
D558_RS00505   99465 ..   99490 - -19.1  -5.92399   CAAGAAAATAAAAAA         GGCGCTTGAGC AATC GCTCAAGCGCC          TGATTCATCTACATT 100 44
D558_RS00500   98638 ..   98664 -    -3  -3.31322   TGTAATTGCTTAGAA        CGCTTGGTGCA CCCTAC TGG-CCAAGCG         AAAGAAGCCTGCGCG  45 165
D558_RS00495   98144 ..   98173 - -12.9  -4.13767   TGTCGGACGTCAAAA       TGGCCGATGCGCGC AAT GCGCGCAT-GGTCA       TCCTGGAAGATGGCG  89 148
D558_RS00475 NONE
D558_RS00470   94352 ..   94367 -  -3.9  -3.09933   CGTCAATCTATTGAA              CCGGC GAGTTT ACCGG               ATATTGAACAAAATC  45 41
D558_RS00465 NONE
D558_RS00460 NONE
D558_RS00455   91543 ..   91560 -  -3.4  -3.61764   TCATCAACGGCGAAA             CGGC-CA TGGTC TGCGCCG             AGCCTGCCCTCAAGC  51 308
D558_RS00440   86727 ..   86752 - -11.1  -3.57561   CCCGAACTCGTCAAA         GCCATCGCACC GCAG GGCGCCATGGC          CGTGATCGACGACCC  74 308
D558_RS00430   84988 ..   84998 -  -3.2   -2.7556   AACCCCATTGAACCA                 TGCC GCA AGCA                 GGCAGGCCAACATGG  41 43
D558_RS00425   84659 ..   84695 - -10.9  -3.05562   ACAAACCCTTGAATA    GTTGCCGAACAAAGGCA AAA TCCCCTTGTTCGACAGC    CACTTGCAACGGCCG  69 62
D558_RS00410   82146 ..   82164 -  -4.4  -5.05782   AGCGAGTGGAAAAAA             CCTGCGAG GAA CACGCAGC             TATCCTGCAAGCCGT  82 161
D558_RS00375   75824 ..   75842 -  -8.2  -3.69323   CCACCATCAGCCAAA             CAAGCGAA GGT TTCACTTG             AAAACGGCGTCAGGC  66 19
D558_RS00370 NONE
D558_RS00365 NONE
D558_RS00360   72178 ..   72198 -  -3.2  -3.41602   CGGACTCTAGCAGAA           GCGC-CGGA TCAC CCCAAGCGC            GGCACGCGGCGGAAA  47 13
D558_RS00355   71243 ..   71282 -  -9.2  -4.25104   CTGGCTGGATCAAAA  CCGAGCTGGCCCGGCTCAA GAC CTGAGC-GGGCCGGCCTGA  GGTCAGGCCGCGGCG  80 28
D558_RS00345   69296 ..   69319 - -14.6  -5.94214   AAGACAATAAAAAAA          GGGGC-GACGC ACC GCGTCAGCCCC          CCTGCTTCGCCGTGC 100 47
D558_RS00335   67425 ..   67459 - -10.8  -4.78764   CAAACCGATGAAAAA    CCCCCGCAACCTGGA TGTTTG TCCAAGCT-CGGGGG     TCCGTCCGGCGTGCC  95 71
D558_RS00330 NONE
D558_RS00325   64767 ..   64797 - -22.7  -5.01732   AAGGTGCCCAAAAAA       GCCTGAACCCGGC GCGTG GCCGGGTTCAGGC       TTTTTAGTTGGAGCT 100 58
D558_RS00305 NONE
D558_RS00300 NONE
D558_RS00295 NONE
D558_RS00290 NONE
D558_RS00285   56889 ..   56908 - -11.4  -5.32608   AAAAAATGCAAAAAA            GCGGACGC ATAA GCATCCGC             CTCTTATCACGCAGC 100 32
D558_RS00280   56696 ..   56719 - -18.2  -4.54727   TGCGCCAAATGAAAA          GGCCCGCGAT AAAA ATCGCGGGCC           TTAAATCTTGGCGGA 100 34
D558_RS00270   54698 ..   54709 -  -3.6  -4.09685   CGTCAGTCGGCAAAA                CGCA GGCG CGCG                 AAGCTGGCAATGCTG  60 1
D558_RS00245   47922 ..   47944 - -19.2  -4.45168   GCGCCAAAAGAGAAA           GCCCGCAAGC ATG GCTTGCGGGC           TTTGCAGATATGGCG 100 36
D558_RS00220   44146 ..   44168 - -17.8  -5.86332   TGAACCTAAAAAAAA           TCCCGCAAGC ATG GCTTGCGGGA           TTTCTCAATATGGCG 100 36
D558_RS00215   43346 ..   43359 -  -2.3  -3.04792   CCACGACGTGGAACA               GGTCG TAGA CGATC                TCGGCGTTGGGGCAG  41 13
D558_RS00210   42777 ..   42794 -  -2.6  -3.95073   GGGCAGACGTATAAA             TGCGGC GGCCAT GCAGCA              ATCCCGCCCGCCTGT  56 66
D558_RS00195   38913 ..   38925 -  -4.9  -2.98823   GCGTGGTGACATAGA                CATAT GTA ATATG                TGTCTATTATTAGAC  46 47
D558_RS00190   38251 ..   38276 -  -6.2  -4.89009   AGATTTAACGAAAAA        CCAT--CCCGGC GCAC GCCGGGGCATGG         CACTTATTTAGCATC  86 29
D558_RS00185   37155 ..   37168 -  -5.9  -3.59979   CGGGGCGAGGTCAAA               GCGAC AATG GCCGC                CCTGGGCTTGCCGCG  57 105
D558_RS00170   32303 ..   32323 -   -14  -5.75342   TGCCCTGAAAAAAAA            CACCGGGG CTTGC CCCCGGTG            CCTGTCTTCTTCTGG 100 52
D558_RS00130   25428 ..   25445 -    -2  -3.88985   AAAATCTCTGACAAA             CGGAACA TCAAT TGT-CCG             GTGCGTCAGCGCCTG  53 31
D558_RS00120   22571 ..   22603 -  -2.7  -3.02043   AACGCGCCTGGAAGA    TC-CCGCCGACGCTCG GATG CGGGCG--GGCGGTGA     CGTCAAGCAGCCGCT  41 147
D558_RS00105 NONE
D558_RS00100   19557 ..   19574 - -11.3  -3.61517   ACTGCCCCCCAATAA             GCTGGAC CTAG GTCCAGC              TTATTGGGGGGCAGT  74 59
D558_RS00065   12000 ..   12048 -  -4.3    -3.727   TCGACGATAGTCAAA CAGCGGAATCGGCGGCCATAGGC TAG GCCGTCGGCCACAAAGTCCATTG ACCAACTCTGATTCG  54 383
D558_RS00060   11226 ..   11265 -  -9.9  -2.75819   CACACAGGCGGAAAG  GCGTTCTAGCCGCCGCAG GCAGG CTGCGG-GGCATGCACGC  AAACCCCCTGCGCCT  61 306
D558_RS00035 NONE
D558_RS00030 NONE
D558_RS00025    4000 ..    4038 -  -5.3  -4.25104   GCTGTCGGACCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCTGGT  66 72
D558_RS00020     810 ..     823 -  -6.7  -2.93817   AATTTGGAAGAAGCA               GCAAC TGAG GTTGC                GTTGATGTATGTTCA   0 87
