locus-tag class description D560_RS00030 PF13276 HTH-like domain D560_RS00030 PF13333 Integrase core domain D560_RS00030 PF00665 Integrase core domain D560_RS00035 PF10150 Ribonuclease E/G family D560_RS00035 PF00575 S1 RNA binding domain D560_RS00040 PF00990 Diguanylate cyclase, GGDEF domain D560_RS00045 PF13683 Integrase core domain D560_RS00045 PF13276 HTH-like domain D560_RS00050 PF01527 Transposase D560_RS00055 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS00055 PF01610 Transposase D560_RS00055 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS00070 PF02321 Outer membrane efflux protein D560_RS00075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D560_RS00075 PF00529 HlyD membrane-fusion protein of T1SS D560_RS00080 PF07690 Major Facilitator Superfamily D560_RS00085 PF00180 Isocitrate/isopropylmalate dehydrogenase D560_RS00105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D560_RS00110 PF00202 Aminotransferase class-III D560_RS00115 PF05872 Bacterial protein of unknown function (DUF853) D560_RS00120 PF01709 Transcriptional regulator D560_RS00145 PF02590 Predicted SPOUT methyltransferase D560_RS00150 PF02545 Maf-like protein D560_RS00160 PF00512 His Kinase A (phospho-acceptor) domain D560_RS00160 PF02743 Cache domain D560_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS00165 PF00158 Sigma-54 interaction domain D560_RS00165 PF00072 Response regulator receiver domain D560_RS00165 PF02954 Bacterial regulatory protein, Fis family D560_RS00170 PF00291 Pyridoxal-phosphate dependent enzyme D560_RS00190 PF13847 Methyltransferase domain D560_RS00190 PF10119 Predicted methyltransferase regulatory domain D560_RS00195 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS00195 PF01610 Transposase D560_RS00195 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS00205 PF01297 Zinc-uptake complex component A periplasmic D560_RS00210 PF00005 ABC transporter D560_RS00215 PF00950 ABC 3 transport family D560_RS00220 PF00950 ABC 3 transport family D560_RS00230 PF01610 Transposase D560_RS00230 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS00230 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS00235 PF13683 Integrase core domain D560_RS00235 PF13276 HTH-like domain D560_RS00240 PF13683 Integrase core domain D560_RS00240 PF13276 HTH-like domain D560_RS00245 PF01527 Transposase D560_RS00250 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS00250 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS00250 PF01610 Transposase D560_RS00255 PF13360 PQQ-like domain D560_RS00255 PF01011 PQQ enzyme repeat D560_RS00265 PF07715 TonB-dependent Receptor Plug Domain D560_RS00265 PF00593 TonB dependent receptor D560_RS00270 PF07690 Major Facilitator Superfamily D560_RS00285 PF01842 ACT domain D560_RS00285 PF13840 ACT domain D560_RS00285 PF00696 Amino acid kinase family D560_RS00290 PF09179 TilS substrate binding domain D560_RS00290 PF01171 PP-loop family D560_RS00295 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D560_RS00300 PF12833 Helix-turn-helix domain D560_RS00300 PF02805 Metal binding domain of Ada D560_RS00300 PF06029 AlkA N-terminal domain D560_RS00300 PF00730 HhH-GPD superfamily base excision DNA repair protein D560_RS00305 PF09190 DALR domain D560_RS00305 PF01406 tRNA synthetases class I (C) catalytic domain D560_RS00315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D560_RS00320 PF00149 Calcineurin-like phosphoesterase D560_RS00325 PF02673 Bacitracin resistance protein BacA D560_RS00330 PF03471 Transporter associated domain D560_RS00330 PF03741 Integral membrane protein TerC family D560_RS00335 PF00459 Inositol monophosphatase family D560_RS00340 PF00588 SpoU rRNA Methylase family D560_RS00345 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS00355 PF00924 Mechanosensitive ion channel D560_RS00355 PF05552 Conserved TM helix D560_RS00380 PF09084 NMT1/THI5 like D560_RS00390 PF12857 TOBE-like domain D560_RS00390 PF00005 ABC transporter D560_RS00400 PF01425 Amidase D560_RS00405 PF00392 Bacterial regulatory proteins, gntR family D560_RS00405 PF07729 FCD domain D560_RS00420 PF03358 NADPH-dependent FMN reductase D560_RS00425 PF07311 Dodecin D560_RS00435 PF08240 Alcohol dehydrogenase GroES-like domain D560_RS00435 PF00107 Zinc-binding dehydrogenase D560_RS00445 PF05188 MutS domain II D560_RS00445 PF05192 MutS domain III D560_RS00445 PF00488 MutS domain V D560_RS00445 PF05190 MutS family domain IV D560_RS00445 PF01624 MutS domain I D560_RS00450 PF08007 Cupin superfamily protein D560_RS00460 PF06804 NlpB/DapX lipoprotein D560_RS00465 PF00701 Dihydrodipicolinate synthetase family D560_RS00470 PF02163 Peptidase family M50 D560_RS00480 PF04228 Putative neutral zinc metallopeptidase D560_RS00500 PF02627 Carboxymuconolactone decarboxylase family D560_RS00510 PF13396 Phospholipase_D-nuclease N-terminal D560_RS00510 PF13091 PLD-like domain D560_RS00515 PF07690 Major Facilitator Superfamily D560_RS00530 PF00291 Pyridoxal-phosphate dependent enzyme D560_RS00535 PF01527 Transposase D560_RS00540 PF00665 Integrase core domain D560_RS00540 PF13333 Integrase core domain D560_RS00540 PF13276 HTH-like domain D560_RS00545 PF01527 Transposase D560_RS00550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS00550 PF03466 LysR substrate binding domain D560_RS00610 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS00620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS00620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS00620 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS00630 PF07729 FCD domain D560_RS00630 PF00392 Bacterial regulatory proteins, gntR family D560_RS00655 PF08281 Sigma-70, region 4 D560_RS00655 PF04542 Sigma-70 region 2 D560_RS00670 PF01527 Transposase D560_RS00675 PF13276 HTH-like domain D560_RS00675 PF13683 Integrase core domain D560_RS00695 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS00700 PF01557 Fumarylacetoacetate (FAA) hydrolase family D560_RS00720 PF00005 ABC transporter D560_RS00725 PF01032 FecCD transport family D560_RS00730 PF01032 FecCD transport family D560_RS00735 PF01497 Periplasmic binding protein D560_RS00740 PF00534 Glycosyl transferases group 1 D560_RS00740 PF13439 Glycosyltransferase Family 4 D560_RS00745 PF03840 Preprotein translocase SecG subunit D560_RS00750 PF00121 Triosephosphate isomerase D560_RS00755 PF08659 KR domain D560_RS00755 PF08240 Alcohol dehydrogenase GroES-like domain D560_RS00755 PF00550 Phosphopantetheine attachment site D560_RS00755 PF14765 Polyketide synthase dehydratase D560_RS00755 PF00698 Acyl transferase domain D560_RS00765 PF01425 Amidase D560_RS00770 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS00770 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS00770 PF01610 Transposase D560_RS00775 PF00543 Nitrogen regulatory protein P-II D560_RS00785 PF00924 Mechanosensitive ion channel D560_RS00790 PF00206 Lyase D560_RS00790 PF14698 Argininosuccinate lyase C-terminal D560_RS00800 PF13411 MerR HTH family regulatory protein D560_RS00805 PF00403 Heavy-metal-associated domain D560_RS00810 PF01435 Peptidase family M48 D560_RS00815 PF00561 alpha/beta hydrolase fold D560_RS00825 PF00005 ABC transporter D560_RS00830 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS00845 PF02515 CoA-transferase family III D560_RS00850 PF01425 Amidase D560_RS00855 PF00392 Bacterial regulatory proteins, gntR family D560_RS00855 PF07729 FCD domain D560_RS00860 PF03212 Pertactin D560_RS00860 PF16168 Adhesin of bacterial autotransporter system, probable stalk D560_RS00860 PF13018 Extended Signal Peptide of Type V secretion system D560_RS00860 PF03797 Autotransporter beta-domain D560_RS00865 PF03212 Pertactin D560_RS00865 PF16168 Adhesin of bacterial autotransporter system, probable stalk D560_RS00865 PF03797 Autotransporter beta-domain D560_RS00870 PF13683 Integrase core domain D560_RS00870 PF13276 HTH-like domain D560_RS00875 PF13276 HTH-like domain D560_RS00875 PF13683 Integrase core domain D560_RS00880 PF01527 Transposase D560_RS00905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D560_RS00905 PF02403 Seryl-tRNA synthetase N-terminal domain D560_RS00910 PF16193 AAA C-terminal domain D560_RS00910 PF00004 ATPase family associated with various cellular activities (AAA) D560_RS00910 PF12002 MgsA AAA+ ATPase C terminal D560_RS00915 PF03548 Outer membrane lipoprotein carrier protein LolA D560_RS00920 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D560_RS00920 PF17854 FtsK alpha domain D560_RS00920 PF01580 FtsK/SpoIIIE family D560_RS00920 PF09397 Ftsk gamma domain D560_RS00925 PF07992 Pyridine nucleotide-disulphide oxidoreductase D560_RS00930 PF01713 Smr domain D560_RS00930 PF00488 MutS domain V D560_RS00935 PF00893 Small Multidrug Resistance protein D560_RS00945 PF00474 Sodium:solute symporter family D560_RS00955 PF03814 Potassium-transporting ATPase A subunit D560_RS00965 PF02669 K+-transporting ATPase, c chain D560_RS00975 PF00486 Transcriptional regulatory protein, C terminal D560_RS00975 PF00072 Response regulator receiver domain D560_RS00990 PF00180 Isocitrate/isopropylmalate dehydrogenase D560_RS01005 PF00034 Cytochrome c D560_RS01010 PF01434 Peptidase family M41 D560_RS01010 PF17862 AAA+ lid domain D560_RS01010 PF00004 ATPase family associated with various cellular activities (AAA) D560_RS01030 PF00675 Insulinase (Peptidase family M16) D560_RS01030 PF05193 Peptidase M16 inactive domain D560_RS01035 PF00226 DnaJ domain D560_RS01035 PF01556 DnaJ C terminal domain D560_RS01035 PF00684 DnaJ central domain D560_RS01040 PF00012 Hsp70 protein D560_RS01050 PF01025 GrpE D560_RS01060 PF00762 Ferrochelatase D560_RS01065 PF01628 HrcA protein C terminal domain D560_RS01065 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D560_RS01070 PF01513 ATP-NAD kinase D560_RS01075 PF02463 RecF/RecN/SMC N terminal domain D560_RS01080 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS01080 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS01080 PF01610 Transposase D560_RS01085 PF13683 Integrase core domain D560_RS01085 PF13276 HTH-like domain D560_RS01090 PF01527 Transposase D560_RS01095 PF01610 Transposase D560_RS01095 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS01095 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS01100 PF01475 Ferric uptake regulator family D560_RS01105 PF04355 SmpA / OmlA family D560_RS01110 PF01113 Dihydrodipicolinate reductase, N-terminus D560_RS01110 PF05173 Dihydrodipicolinate reductase, C-terminus D560_RS01115 PF01565 FAD binding domain D560_RS01115 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D560_RS01125 PF13333 Integrase core domain D560_RS01125 PF00665 Integrase core domain D560_RS01125 PF13276 HTH-like domain D560_RS01130 PF01527 Transposase D560_RS01135 PF13683 Integrase core domain D560_RS01135 PF13276 HTH-like domain D560_RS01140 PF13098 Thioredoxin-like domain D560_RS01150 PF00330 Aconitase family (aconitate hydratase) D560_RS01150 PF00694 Aconitase C-terminal domain D560_RS01155 PF04303 PrpF protein D560_RS01160 PF01810 LysE type translocator D560_RS01165 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS01195 PF00694 Aconitase C-terminal domain D560_RS01195 PF00330 Aconitase family (aconitate hydratase) D560_RS01200 PF01979 Amidohydrolase family D560_RS01205 PF00857 Isochorismatase family D560_RS01210 PF07683 Cobalamin synthesis protein cobW C-terminal domain D560_RS01210 PF02492 CobW/HypB/UreG, nucleotide-binding domain D560_RS01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS01240 PF03466 LysR substrate binding domain D560_RS01250 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D560_RS01255 PF04376 Arginine-tRNA-protein transferase, N terminus D560_RS01255 PF04377 Arginine-tRNA-protein transferase, C terminus D560_RS01260 PF01180 Dihydroorotate dehydrogenase D560_RS01265 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS01265 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS01265 PF01610 Transposase D560_RS01270 PF01527 Transposase D560_RS01275 PF13276 HTH-like domain D560_RS01275 PF13683 Integrase core domain D560_RS01280 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS01280 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS01280 PF01610 Transposase D560_RS01290 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS01290 PF01610 Transposase D560_RS01290 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS01295 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS01300 PF09339 IclR helix-turn-helix domain D560_RS01300 PF01614 Bacterial transcriptional regulator D560_RS01320 PF00271 Helicase conserved C-terminal domain D560_RS01320 PF00270 DEAD/DEAH box helicase D560_RS01350 PF00483 Nucleotidyl transferase D560_RS01365 PF00690 Cation transporter/ATPase, N-terminus D560_RS01365 PF00689 Cation transporting ATPase, C-terminus D560_RS01370 PF13276 HTH-like domain D560_RS01370 PF13683 Integrase core domain D560_RS01375 PF01527 Transposase D560_RS01385 PF05195 Aminopeptidase P, N-terminal domain D560_RS01385 PF00557 Metallopeptidase family M24 D560_RS01395 PF01494 FAD binding domain D560_RS01405 PF01207 Dihydrouridine synthase (Dus) D560_RS01410 PF02954 Bacterial regulatory protein, Fis family D560_RS01415 PF02142 MGS-like domain D560_RS01415 PF01808 AICARFT/IMPCHase bienzyme D560_RS01420 PF02075 Crossover junction endodeoxyribonuclease RuvC D560_RS01425 PF07499 RuvA, C-terminal domain D560_RS01425 PF01330 RuvA N terminal domain D560_RS01440 PF05496 Holliday junction DNA helicase RuvB P-loop domain D560_RS01440 PF17864 RuvB AAA lid domain D560_RS01440 PF05491 RuvB C-terminal winged helix domain D560_RS01445 PF00270 DEAD/DEAH box helicase D560_RS01445 PF09382 RQC domain D560_RS01445 PF16124 RecQ zinc-binding D560_RS01445 PF00570 HRDC domain D560_RS01445 PF00271 Helicase conserved C-terminal domain D560_RS01455 PF00486 Transcriptional regulatory protein, C terminal D560_RS01455 PF00072 Response regulator receiver domain D560_RS01465 PF02322 Cytochrome bd terminal oxidase subunit II D560_RS01475 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D560_RS01475 PF00749 tRNA synthetases class I (E and Q), catalytic domain D560_RS01480 PF05209 Septum formation inhibitor MinC, N-terminal domain D560_RS01480 PF03775 Septum formation inhibitor MinC, C-terminal domain D560_RS01485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D560_RS01495 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS01495 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS01495 PF01610 Transposase D560_RS01510 PF00005 ABC transporter D560_RS01510 PF12848 ABC transporter D560_RS01525 PF00005 ABC transporter D560_RS01525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS01530 PF00005 ABC transporter D560_RS01530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS01550 PF00535 Glycosyl transferase family 2 D560_RS01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS01555 PF03466 LysR substrate binding domain D560_RS01565 PF07943 Penicillin-binding protein 5, C-terminal domain D560_RS01565 PF00768 D-alanyl-D-alanine carboxypeptidase D560_RS01585 PF08240 Alcohol dehydrogenase GroES-like domain D560_RS01585 PF00107 Zinc-binding dehydrogenase D560_RS01590 PF00989 PAS fold D560_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS01590 PF00512 His Kinase A (phospho-acceptor) domain D560_RS01595 PF00196 Bacterial regulatory proteins, luxR family D560_RS01595 PF00072 Response regulator receiver domain D560_RS01605 PF07729 FCD domain D560_RS01605 PF00392 Bacterial regulatory proteins, gntR family D560_RS01615 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS01630 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS01635 PF03880 DbpA RNA binding domain D560_RS01635 PF00271 Helicase conserved C-terminal domain D560_RS01635 PF00270 DEAD/DEAH box helicase D560_RS01640 PF00924 Mechanosensitive ion channel D560_RS01650 PF00689 Cation transporting ATPase, C-terminus D560_RS01650 PF00690 Cation transporter/ATPase, N-terminus D560_RS01655 PF08281 Sigma-70, region 4 D560_RS01655 PF04542 Sigma-70 region 2 D560_RS01665 PF00593 TonB dependent receptor D560_RS01665 PF07715 TonB-dependent Receptor Plug Domain D560_RS01665 PF07660 Secretin and TonB N terminus short domain D560_RS01685 PF00465 Iron-containing alcohol dehydrogenase D560_RS01690 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS01700 PF13520 Amino acid permease D560_RS01705 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D560_RS01705 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D560_RS01705 PF01276 Orn/Lys/Arg decarboxylase, major domain D560_RS01710 PF13520 Amino acid permease D560_RS01720 PF01527 Transposase D560_RS01725 PF13276 HTH-like domain D560_RS01725 PF13683 Integrase core domain D560_RS01730 PF00166 Chaperonin 10 Kd subunit D560_RS01735 PF00118 TCP-1/cpn60 chaperonin family D560_RS01745 PF01219 Prokaryotic diacylglycerol kinase D560_RS01750 PF07992 Pyridine nucleotide-disulphide oxidoreductase D560_RS01755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D560_RS01760 PF02464 Competence-damaged protein D560_RS01765 PF04608 Phosphatidylglycerophosphatase A D560_RS01770 PF00586 AIR synthase related protein, N-terminal domain D560_RS01770 PF02769 AIR synthase related protein, C-terminal domain D560_RS01775 PF01029 NusB family D560_RS01780 PF00885 6,7-dimethyl-8-ribityllumazine synthase D560_RS01785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D560_RS01785 PF00925 GTP cyclohydrolase II D560_RS01800 PF07715 TonB-dependent Receptor Plug Domain D560_RS01800 PF07660 Secretin and TonB N terminus short domain D560_RS01800 PF00593 TonB dependent receptor D560_RS01810 PF04542 Sigma-70 region 2 D560_RS01810 PF08281 Sigma-70, region 4 D560_RS01820 PF00005 ABC transporter D560_RS01825 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS01830 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS01840 PF00448 SRP54-type protein, GTPase domain D560_RS01840 PF02881 SRP54-type protein, helical bundle domain D560_RS01850 PF01467 Cytidylyltransferase-like D560_RS01855 PF00037 4Fe-4S binding domain D560_RS01860 PF03594 Benzoate membrane transport protein D560_RS01880 PF07715 TonB-dependent Receptor Plug Domain D560_RS01880 PF00593 TonB dependent receptor D560_RS01890 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS01890 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS01890 PF01610 Transposase D560_RS01895 PF01557 Fumarylacetoacetate (FAA) hydrolase family D560_RS01900 PF00378 Enoyl-CoA hydratase/isomerase D560_RS01905 PF00682 HMGL-like D560_RS01910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS01910 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS01910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS01920 PF00501 AMP-binding enzyme D560_RS01920 PF13193 AMP-binding enzyme C-terminal domain D560_RS01925 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS01935 PF03466 LysR substrate binding domain D560_RS01950 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS01960 PF01565 FAD binding domain D560_RS01960 PF02913 FAD linked oxidases, C-terminal domain D560_RS01965 PF00175 Oxidoreductase NAD-binding domain D560_RS01965 PF00111 2Fe-2S iron-sulfur cluster binding domain D560_RS01970 PF00355 Rieske [2Fe-2S] domain D560_RS01980 PF07729 FCD domain D560_RS01980 PF00392 Bacterial regulatory proteins, gntR family D560_RS01990 PF07690 Major Facilitator Superfamily D560_RS02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS02000 PF03466 LysR substrate binding domain D560_RS02005 PF00593 TonB dependent receptor D560_RS02005 PF07715 TonB-dependent Receptor Plug Domain D560_RS02025 PF01926 50S ribosome-binding GTPase D560_RS02025 PF06071 Protein of unknown function (DUF933) D560_RS02035 PF01195 Peptidyl-tRNA hydrolase D560_RS02040 PF14693 Ribosomal protein TL5, C-terminal domain D560_RS02040 PF01386 Ribosomal L25p family D560_RS02045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D560_RS02045 PF14572 Phosphoribosyl synthetase-associated domain D560_RS02055 PF08544 GHMP kinases C terminal D560_RS02055 PF00288 GHMP kinases N terminal domain D560_RS02060 PF03550 Outer membrane lipoprotein LolB D560_RS02070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D560_RS02070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D560_RS02070 PF06827 Zinc finger found in FPG and IleRS D560_RS02080 PF01494 FAD binding domain D560_RS02100 PF04209 homogentisate 1,2-dioxygenase D560_RS02115 PF00392 Bacterial regulatory proteins, gntR family D560_RS02115 PF07729 FCD domain D560_RS02125 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02130 PF00672 HAMP domain D560_RS02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS02130 PF00512 His Kinase A (phospho-acceptor) domain D560_RS02135 PF00072 Response regulator receiver domain D560_RS02135 PF00486 Transcriptional regulatory protein, C terminal D560_RS02140 PF02913 FAD linked oxidases, C-terminal domain D560_RS02140 PF01565 FAD binding domain D560_RS02160 PF13477 Glycosyl transferase 4-like D560_RS02160 PF00534 Glycosyl transferases group 1 D560_RS02165 PF13439 Glycosyltransferase Family 4 D560_RS02165 PF00534 Glycosyl transferases group 1 D560_RS02170 PF13439 Glycosyltransferase Family 4 D560_RS02170 PF00534 Glycosyl transferases group 1 D560_RS02175 PF13537 Glutamine amidotransferase domain D560_RS02175 PF00733 Asparagine synthase D560_RS02190 PF01370 NAD dependent epimerase/dehydratase family D560_RS02195 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D560_RS02195 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D560_RS02195 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D560_RS02200 PF00953 Glycosyl transferase family 4 D560_RS02205 PF01610 Transposase D560_RS02205 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS02205 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS02210 PF03232 Ubiquinone biosynthesis protein COQ7 D560_RS02220 PF00303 Thymidylate synthase D560_RS02225 PF00186 Dihydrofolate reductase D560_RS02230 PF00155 Aminotransferase class I and II D560_RS02230 PF00392 Bacterial regulatory proteins, gntR family D560_RS02235 PF00202 Aminotransferase class-III D560_RS02240 PF00171 Aldehyde dehydrogenase family D560_RS02250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D560_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS02285 PF02347 Glycine cleavage system P-protein D560_RS02290 PF01597 Glycine cleavage H-protein D560_RS02315 PF13508 Acetyltransferase (GNAT) domain D560_RS02315 PF00583 Acetyltransferase (GNAT) family D560_RS02320 PF00692 dUTPase D560_RS02335 PF10609 NUBPL iron-transfer P-loop NTPase D560_RS02345 PF09334 tRNA synthetases class I (M) D560_RS02345 PF01588 Putative tRNA binding domain D560_RS02370 PF16970 Type-1 fimbrial protein, A D560_RS02375 PF00491 Arginase family D560_RS02385 PF00486 Transcriptional regulatory protein, C terminal D560_RS02385 PF00072 Response regulator receiver domain D560_RS02405 PF01032 FecCD transport family D560_RS02410 PF00127 Copper binding proteins, plastocyanin/azurin family D560_RS02415 PF00005 ABC transporter D560_RS02420 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D560_RS02425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D560_RS02430 PF02627 Carboxymuconolactone decarboxylase family D560_RS02450 PF01547 Bacterial extracellular solute-binding protein D560_RS02455 PF00005 ABC transporter D560_RS02455 PF08402 TOBE domain D560_RS02460 PF13609 Gram-negative porin D560_RS02465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS02465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS02465 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS02470 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS02475 PF03466 LysR substrate binding domain D560_RS02480 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02485 PF02515 CoA-transferase family III D560_RS02490 PF00378 Enoyl-CoA hydratase/isomerase D560_RS02505 PF03466 LysR substrate binding domain D560_RS02505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS02515 PF00043 Glutathione S-transferase, C-terminal domain D560_RS02515 PF02798 Glutathione S-transferase, N-terminal domain D560_RS02530 PF00392 Bacterial regulatory proteins, gntR family D560_RS02530 PF00155 Aminotransferase class I and II D560_RS02540 PF00881 Nitroreductase family D560_RS02545 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02555 PF00296 Luciferase-like monooxygenase D560_RS02560 PF03466 LysR substrate binding domain D560_RS02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS02570 PF00378 Enoyl-CoA hydratase/isomerase D560_RS02575 PF13380 CoA binding domain D560_RS02575 PF13607 Succinyl-CoA ligase like flavodoxin domain D560_RS02600 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02605 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02620 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D560_RS02625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D560_RS02630 PF03466 LysR substrate binding domain D560_RS02630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS02655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D560_RS02660 PF03466 LysR substrate binding domain D560_RS02660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS02665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS02665 PF18158 Adaptive response protein AidB N-terminal domain D560_RS02665 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS02670 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS02685 PF00561 alpha/beta hydrolase fold D560_RS02690 PF05690 Thiazole biosynthesis protein ThiG D560_RS02690 PF02597 ThiS family D560_RS02695 PF01527 Transposase D560_RS02700 PF13683 Integrase core domain D560_RS02700 PF13276 HTH-like domain D560_RS02710 PF03466 LysR substrate binding domain D560_RS02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS02715 PF01610 Transposase D560_RS02715 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS02715 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS02720 PF08402 TOBE domain D560_RS02720 PF00005 ABC transporter D560_RS02735 PF02881 SRP54-type protein, helical bundle domain D560_RS02735 PF00448 SRP54-type protein, GTPase domain D560_RS02735 PF02978 Signal peptide binding domain D560_RS02750 PF01510 N-acetylmuramoyl-L-alanine amidase D560_RS02755 PF00043 Glutathione S-transferase, C-terminal domain D560_RS02755 PF13417 Glutathione S-transferase, N-terminal domain D560_RS02760 PF00005 ABC transporter D560_RS02765 PF00005 ABC transporter D560_RS02765 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS02790 PF02653 Branched-chain amino acid transport system / permease component D560_RS02800 PF07286 Protein of unknown function (DUF1445) D560_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS02810 PF00183 Hsp90 protein D560_RS02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS02815 PF00860 Permease family D560_RS02830 PF01527 Transposase D560_RS02835 PF13276 HTH-like domain D560_RS02835 PF13683 Integrase core domain D560_RS02840 PF01527 Transposase D560_RS02850 PF05170 AsmA family D560_RS02855 PF05170 AsmA family D560_RS02860 PF03352 Methyladenine glycosylase D560_RS02885 PF05962 HutD D560_RS02890 PF01979 Amidohydrolase family D560_RS02900 PF00155 Aminotransferase class I and II D560_RS02905 PF00793 DAHP synthetase I family D560_RS02910 PF05159 Capsule polysaccharide biosynthesis protein D560_RS02915 PF05159 Capsule polysaccharide biosynthesis protein D560_RS02925 PF01527 Transposase D560_RS02930 PF13683 Integrase core domain D560_RS02930 PF13276 HTH-like domain D560_RS02940 PF00106 short chain dehydrogenase D560_RS02960 PF03180 NLPA lipoprotein D560_RS02965 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS02970 PF09383 NIL domain D560_RS02970 PF00005 ABC transporter D560_RS02975 PF13802 Galactose mutarotase-like D560_RS02975 PF01055 Glycosyl hydrolases family 31 D560_RS02985 PF00459 Inositol monophosphatase family D560_RS02990 PF13193 AMP-binding enzyme C-terminal domain D560_RS02990 PF00501 AMP-binding enzyme D560_RS02995 PF07687 Peptidase dimerisation domain D560_RS02995 PF01546 Peptidase family M20/M25/M40 D560_RS03000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS03000 PF03466 LysR substrate binding domain D560_RS03005 PF03601 Conserved hypothetical protein 698 D560_RS03010 PF03061 Thioesterase superfamily D560_RS03015 PF01769 Divalent cation transporter D560_RS03015 PF00571 CBS domain D560_RS03015 PF03448 MgtE intracellular N domain D560_RS03020 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP D560_RS03030 PF01037 Lrp/AsnC ligand binding domain D560_RS03040 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS03050 PF13276 HTH-like domain D560_RS03050 PF13683 Integrase core domain D560_RS03060 PF01527 Transposase D560_RS03065 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS03065 PF01610 Transposase D560_RS03065 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS03070 PF01145 SPFH domain / Band 7 family D560_RS03075 PF12221 Bacterial membrane protein N terminal D560_RS03075 PF01145 SPFH domain / Band 7 family D560_RS03080 PF16360 GTP-binding GTPase Middle Region D560_RS03080 PF13167 GTP-binding GTPase N-terminal D560_RS03080 PF01926 50S ribosome-binding GTPase D560_RS03085 PF17209 Hfq protein D560_RS03090 PF00155 Aminotransferase class I and II D560_RS03095 PF01926 50S ribosome-binding GTPase D560_RS03095 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D560_RS03100 PF13360 PQQ-like domain D560_RS03105 PF09976 Tetratricopeptide repeat-like domain D560_RS03110 PF03129 Anticodon binding domain D560_RS03110 PF13393 Histidyl-tRNA synthetase D560_RS03115 PF04551 GcpE protein D560_RS03125 PF04055 Radical SAM superfamily D560_RS03130 PF00334 Nucleoside diphosphate kinase D560_RS03135 PF10458 Valyl tRNA synthetase tRNA binding arm D560_RS03135 PF00133 tRNA synthetases class I (I, L, M and V) D560_RS03135 PF08264 Anticodon-binding domain of tRNA D560_RS03140 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS03140 PF01610 Transposase D560_RS03140 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS03145 PF01746 tRNA (Guanine-1)-methyltransferase D560_RS03150 PF01782 RimM N-terminal domain D560_RS03155 PF00886 Ribosomal protein S16 D560_RS03160 PF01206 Sulfurtransferase TusA D560_RS03215 PF13683 Integrase core domain D560_RS03215 PF13276 HTH-like domain D560_RS03220 PF01527 Transposase D560_RS03235 PF00175 Oxidoreductase NAD-binding domain D560_RS03235 PF00111 2Fe-2S iron-sulfur cluster binding domain D560_RS03235 PF00970 Oxidoreductase FAD-binding domain D560_RS03240 PF02261 Aspartate decarboxylase D560_RS03245 PF00893 Small Multidrug Resistance protein D560_RS03250 PF03473 MOSC domain D560_RS03250 PF03476 MOSC N-terminal beta barrel domain D560_RS03250 PF00111 2Fe-2S iron-sulfur cluster binding domain D560_RS03255 PF05721 Phytanoyl-CoA dioxygenase (PhyH) D560_RS03260 PF06339 Ectoine synthase D560_RS03270 PF00583 Acetyltransferase (GNAT) family D560_RS03275 PF12802 MarR family D560_RS03285 PF00202 Aminotransferase class-III D560_RS03295 PF00521 DNA gyrase/topoisomerase IV, subunit A D560_RS03305 PF00204 DNA gyrase B D560_RS03305 PF01751 Toprim domain D560_RS03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS03305 PF00986 DNA gyrase B subunit, carboxyl terminus D560_RS03310 PF00085 Thioredoxin D560_RS03315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D560_RS03315 PF07498 Rho termination factor, N-terminal domain D560_RS03315 PF07497 Rho termination factor, RNA-binding domain D560_RS03325 PF03710 Glutamate-ammonia ligase adenylyltransferase D560_RS03325 PF08335 GlnD PII-uridylyltransferase D560_RS03330 PF02677 Epoxyqueuosine reductase QueH D560_RS03335 PF03313 Serine dehydratase alpha chain D560_RS03335 PF03315 Serine dehydratase beta chain D560_RS03340 PF02690 Na+/Pi-cotransporter D560_RS03345 PF13419 Haloacid dehalogenase-like hydrolase D560_RS03350 PF01738 Dienelactone hydrolase family D560_RS03355 PF02535 ZIP Zinc transporter D560_RS03365 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D560_RS03365 PF06481 COX Aromatic Rich Motif D560_RS03370 PF00115 Cytochrome C and Quinol oxidase polypeptide I D560_RS03375 PF00510 Cytochrome c oxidase subunit III D560_RS03380 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D560_RS03390 PF01612 3'-5' exonuclease D560_RS03390 PF00476 DNA polymerase family A D560_RS03390 PF01367 5'-3' exonuclease, C-terminal SAM fold D560_RS03390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D560_RS03395 PF03641 Possible lysine decarboxylase D560_RS03415 PF01361 Tautomerase enzyme D560_RS03420 PF00005 ABC transporter D560_RS03420 PF00571 CBS domain D560_RS03425 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS03435 PF01610 Transposase D560_RS03435 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS03435 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS03445 PF07690 Major Facilitator Superfamily D560_RS03450 PF00830 Ribosomal L28 family D560_RS03455 PF00471 Ribosomal protein L33 D560_RS03465 PF01610 Transposase D560_RS03465 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS03465 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS03480 PF12802 MarR family D560_RS03485 PF07690 Major Facilitator Superfamily D560_RS03490 PF13603 Leucyl-tRNA synthetase, Domain 2 D560_RS03490 PF08264 Anticodon-binding domain of tRNA D560_RS03490 PF09334 tRNA synthetases class I (M) D560_RS03490 PF00133 tRNA synthetases class I (I, L, M and V) D560_RS03505 PF00171 Aldehyde dehydrogenase family D560_RS03525 PF00529 HlyD membrane-fusion protein of T1SS D560_RS03525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D560_RS03530 PF00005 ABC transporter D560_RS03530 PF00664 ABC transporter transmembrane region D560_RS03530 PF03412 Peptidase C39 family D560_RS03540 PF01527 Transposase D560_RS03545 PF13683 Integrase core domain D560_RS03545 PF13276 HTH-like domain D560_RS03575 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain D560_RS03575 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain D560_RS03585 PF12794 Mechanosensitive ion channel inner membrane domain 1 D560_RS03585 PF00924 Mechanosensitive ion channel D560_RS03585 PF12795 Mechanosensitive ion channel porin domain D560_RS03590 PF01925 Sulfite exporter TauE/SafE D560_RS03595 PF00892 EamA-like transporter family D560_RS03605 PF00929 Exonuclease D560_RS03605 PF02811 PHP domain D560_RS03605 PF14579 Helix-hairpin-helix motif D560_RS03605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D560_RS03605 PF07733 Bacterial DNA polymerase III alpha NTPase domain D560_RS03605 PF11490 DNA polymerase III polC-type N-terminus II D560_RS03605 PF14480 DNA polymerase III polC-type N-terminus I D560_RS03610 PF00330 Aconitase family (aconitate hydratase) D560_RS03610 PF06434 Aconitate hydratase 2 N-terminus D560_RS03610 PF11791 Aconitate B N-terminal domain D560_RS03630 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D560_RS03645 PF09285 Elongation factor P, C-terminal D560_RS03645 PF01132 Elongation factor P (EF-P) OB domain D560_RS03645 PF08207 Elongation factor P (EF-P) KOW-like domain D560_RS03660 PF02954 Bacterial regulatory protein, Fis family D560_RS03660 PF00158 Sigma-54 interaction domain D560_RS03660 PF00072 Response regulator receiver domain D560_RS03670 PF13276 HTH-like domain D560_RS03670 PF13683 Integrase core domain D560_RS03675 PF01527 Transposase D560_RS03705 PF00437 Type II/IV secretion system protein D560_RS03755 PF01047 MarR family D560_RS03765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D560_RS03770 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS03780 PF03466 LysR substrate binding domain D560_RS03790 PF00962 Adenosine/AMP deaminase D560_RS03795 PF03466 LysR substrate binding domain D560_RS03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS03800 PF03060 Nitronate monooxygenase D560_RS03805 PF03060 Nitronate monooxygenase D560_RS03810 PF00043 Glutathione S-transferase, C-terminal domain D560_RS03810 PF13417 Glutathione S-transferase, N-terminal domain D560_RS03820 PF05977 Transmembrane secretion effector D560_RS03830 PF00149 Calcineurin-like phosphoesterase D560_RS03840 PF00990 Diguanylate cyclase, GGDEF domain D560_RS03840 PF08448 PAS fold D560_RS03845 PF01118 Semialdehyde dehydrogenase, NAD binding domain D560_RS03850 PF03466 LysR substrate binding domain D560_RS03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS03870 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS03875 PF03737 Aldolase/RraA D560_RS03885 PF04303 PrpF protein D560_RS03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS03890 PF03466 LysR substrate binding domain D560_RS03895 PF04909 Amidohydrolase D560_RS03900 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS03905 PF00378 Enoyl-CoA hydratase/isomerase D560_RS03910 PF07729 FCD domain D560_RS03910 PF00392 Bacterial regulatory proteins, gntR family D560_RS03915 PF02515 CoA-transferase family III D560_RS03925 PF00324 Amino acid permease D560_RS03930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D560_RS03935 PF03776 Septum formation topological specificity factor MinE D560_RS03955 PF00563 EAL domain D560_RS03955 PF00990 Diguanylate cyclase, GGDEF domain D560_RS03955 PF03707 Bacterial signalling protein N terminal repeat D560_RS03960 PF00664 ABC transporter transmembrane region D560_RS03960 PF00005 ABC transporter D560_RS04005 PF02659 Putative manganese efflux pump D560_RS04010 PF01613 Flavin reductase like domain D560_RS04025 PF07690 Major Facilitator Superfamily D560_RS04045 PF05666 Fels-1 Prophage Protein-like D560_RS04050 PF00005 ABC transporter D560_RS04050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS04060 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS04060 PF12911 N-terminal TM domain of oligopeptide transport permease C D560_RS04065 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS04070 PF01266 FAD dependent oxidoreductase D560_RS04085 PF01266 FAD dependent oxidoreductase D560_RS04095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D560_RS04110 PF02798 Glutathione S-transferase, N-terminal domain D560_RS04125 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase D560_RS04130 PF00732 GMC oxidoreductase D560_RS04130 PF05199 GMC oxidoreductase D560_RS04135 PF00034 Cytochrome c D560_RS04135 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D560_RS04140 PF08281 Sigma-70, region 4 D560_RS04140 PF04542 Sigma-70 region 2 D560_RS04150 PF00593 TonB dependent receptor D560_RS04150 PF07715 TonB-dependent Receptor Plug Domain D560_RS04165 PF00296 Luciferase-like monooxygenase D560_RS04175 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS04180 PF00005 ABC transporter D560_RS04185 PF00005 ABC transporter D560_RS04200 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS04205 PF03466 LysR substrate binding domain D560_RS04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS04210 PF02515 CoA-transferase family III D560_RS04215 PF00378 Enoyl-CoA hydratase/isomerase D560_RS04235 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS04250 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS04255 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS04260 PF00005 ABC transporter D560_RS04265 PF00296 Luciferase-like monooxygenase D560_RS04270 PF03459 TOBE domain D560_RS04280 PF00005 ABC transporter D560_RS04290 PF02653 Branched-chain amino acid transport system / permease component D560_RS04290 PF11862 Domain of unknown function (DUF3382) D560_RS04300 PF01070 FMN-dependent dehydrogenase D560_RS04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS04320 PF03466 LysR substrate binding domain D560_RS04325 PF03466 LysR substrate binding domain D560_RS04325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS04330 PF13378 Enolase C-terminal domain-like D560_RS04330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D560_RS04335 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS04360 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS04365 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS04375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS04375 PF03466 LysR substrate binding domain D560_RS04385 PF01053 Cys/Met metabolism PLP-dependent enzyme D560_RS04390 PF13458 Periplasmic binding protein D560_RS04395 PF02653 Branched-chain amino acid transport system / permease component D560_RS04400 PF02653 Branched-chain amino acid transport system / permease component D560_RS04400 PF11862 Domain of unknown function (DUF3382) D560_RS04405 PF00005 ABC transporter D560_RS04405 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS04410 PF00005 ABC transporter D560_RS04425 PF17760 UvrA interaction domain D560_RS04425 PF00005 ABC transporter D560_RS04425 PF17755 UvrA DNA-binding domain D560_RS04430 PF00425 chorismate binding enzyme D560_RS04430 PF04715 Anthranilate synthase component I, N terminal region D560_RS04440 PF00899 ThiF family D560_RS04445 PF02321 Outer membrane efflux protein D560_RS04450 PF00005 ABC transporter D560_RS04450 PF12704 MacB-like periplasmic core domain D560_RS04450 PF02687 FtsX-like permease family D560_RS04455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D560_RS04470 PF01243 Pyridoxamine 5'-phosphate oxidase D560_RS04470 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D560_RS04475 PF01613 Flavin reductase like domain D560_RS04480 PF01266 FAD dependent oxidoreductase D560_RS04485 PF00551 Formyl transferase D560_RS04495 PF03466 LysR substrate binding domain D560_RS04495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS04500 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS04510 PF00206 Lyase D560_RS04510 PF10415 Fumarase C C-terminus D560_RS04515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D560_RS04520 PF11741 AMIN domain D560_RS04520 PF01520 N-acetylmuramoyl-L-alanine amidase D560_RS04525 PF09335 SNARE associated Golgi protein D560_RS04530 PF01119 DNA mismatch repair protein, C-terminal domain D560_RS04530 PF08676 MutL C terminal dimerisation domain D560_RS04540 PF00586 AIR synthase related protein, N-terminal domain D560_RS04540 PF02769 AIR synthase related protein, C-terminal domain D560_RS04545 PF00308 Bacterial dnaA protein D560_RS04555 PF01743 Poly A polymerase head domain D560_RS04555 PF12626 Polymerase A arginine-rich C-terminus D560_RS04555 PF12627 Probable RNA and SrmB- binding site of polymerase A D560_RS04560 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D560_RS04570 PF01527 Transposase D560_RS04575 PF13683 Integrase core domain D560_RS04575 PF13276 HTH-like domain D560_RS04590 PF02515 CoA-transferase family III D560_RS04605 PF00378 Enoyl-CoA hydratase/isomerase D560_RS04615 PF00392 Bacterial regulatory proteins, gntR family D560_RS04615 PF07702 UTRA domain D560_RS04635 PF02091 Glycyl-tRNA synthetase alpha subunit D560_RS04640 PF02092 Glycyl-tRNA synthetase beta subunit D560_RS04640 PF05746 DALR anticodon binding domain D560_RS04650 PF01553 Acyltransferase D560_RS04675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D560_RS04680 PF01327 Polypeptide deformylase D560_RS04690 PF07670 Nucleoside recognition D560_RS04695 PF02887 Pyruvate kinase, alpha/beta domain D560_RS04695 PF00224 Pyruvate kinase, barrel domain D560_RS04700 PF02595 Glycerate kinase family D560_RS04705 PF00398 Ribosomal RNA adenine dimethylase D560_RS04715 PF04453 LPS transport system D D560_RS04720 PF01636 Phosphotransferase enzyme family D560_RS04725 PF00483 Nucleotidyl transferase D560_RS04735 PF01329 Pterin 4 alpha carbinolamine dehydratase D560_RS04740 PF13488 Glycine zipper D560_RS04740 PF00691 OmpA family D560_RS04750 PF00248 Aldo/keto reductase family D560_RS04760 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS04765 PF13683 Integrase core domain D560_RS04765 PF13276 HTH-like domain D560_RS04770 PF01527 Transposase D560_RS04780 PF13091 PLD-like domain D560_RS04785 PF00484 Carbonic anhydrase D560_RS04815 PF02426 Muconolactone delta-isomerase D560_RS04820 PF01144 Coenzyme A transferase D560_RS04825 PF01144 Coenzyme A transferase D560_RS04830 PF09339 IclR helix-turn-helix domain D560_RS04830 PF01614 Bacterial transcriptional regulator D560_RS04840 PF02667 Short chain fatty acid transporter D560_RS04845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D560_RS04845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D560_RS04850 PF03797 Autotransporter beta-domain D560_RS04850 PF00082 Subtilase family D560_RS04855 PF00311 Phosphoenolpyruvate carboxylase D560_RS04860 PF06508 Queuosine biosynthesis protein QueC D560_RS04875 PF00920 Dehydratase family D560_RS04880 PF00356 Bacterial regulatory proteins, lacI family D560_RS04900 PF13649 Methyltransferase domain D560_RS04915 PF04055 Radical SAM superfamily D560_RS04930 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS04930 PF01610 Transposase D560_RS04930 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS04945 PF01527 Transposase D560_RS04950 PF13276 HTH-like domain D560_RS04950 PF13683 Integrase core domain D560_RS04960 PF02441 Flavoprotein D560_RS04965 PF00462 Glutaredoxin D560_RS04970 PF05175 Methyltransferase small domain D560_RS04970 PF17827 PrmC N-terminal domain D560_RS04975 PF00472 RF-1 domain D560_RS04975 PF03462 PCRF domain D560_RS04980 PF01488 Shikimate / quinate 5-dehydrogenase D560_RS04980 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D560_RS04980 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D560_RS05000 PF07715 TonB-dependent Receptor Plug Domain D560_RS05000 PF00593 TonB dependent receptor D560_RS05010 PF00873 AcrB/AcrD/AcrF family D560_RS05025 PF00916 Sulfate permease family D560_RS05025 PF01740 STAS domain D560_RS05030 PF13378 Enolase C-terminal domain-like D560_RS05030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D560_RS05035 PF04444 Catechol dioxygenase N terminus D560_RS05035 PF00775 Dioxygenase D560_RS05040 PF07690 Major Facilitator Superfamily D560_RS05045 PF00106 short chain dehydrogenase D560_RS05065 PF08281 Sigma-70, region 4 D560_RS05065 PF04542 Sigma-70 region 2 D560_RS05080 PF00348 Polyprenyl synthetase D560_RS05085 PF00829 Ribosomal prokaryotic L21 protein D560_RS05090 PF01016 Ribosomal L27 protein D560_RS05095 PF01018 GTP1/OBG D560_RS05095 PF01926 50S ribosome-binding GTPase D560_RS05100 PF01472 PUA domain D560_RS05100 PF00696 Amino acid kinase family D560_RS05120 PF02355 Protein export membrane protein D560_RS05120 PF07549 SecD/SecF GG Motif D560_RS05125 PF13667 ThiC-associated domain D560_RS05125 PF01964 Radical SAM ThiC family D560_RS05130 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS05130 PF01610 Transposase D560_RS05130 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS05135 PF03466 LysR substrate binding domain D560_RS05140 PF03741 Integral membrane protein TerC family D560_RS05145 PF01565 FAD binding domain D560_RS05145 PF02913 FAD linked oxidases, C-terminal domain D560_RS05155 PF00899 ThiF family D560_RS05160 PF13180 PDZ domain D560_RS05160 PF03572 Peptidase family S41 D560_RS05165 PF01551 Peptidase family M23 D560_RS05170 PF00300 Histidine phosphatase superfamily (branch 1) D560_RS05180 PF00462 Glutaredoxin D560_RS05185 PF02556 Preprotein translocase subunit SecB D560_RS05190 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D560_RS05190 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D560_RS05195 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS05200 PF00588 SpoU rRNA Methylase family D560_RS05210 PF08241 Methyltransferase domain D560_RS05215 PF04107 Glutamate-cysteine ligase family 2(GCS2) D560_RS05220 PF02386 Cation transport protein D560_RS05230 PF02954 Bacterial regulatory protein, Fis family D560_RS05230 PF00158 Sigma-54 interaction domain D560_RS05230 PF00072 Response regulator receiver domain D560_RS05235 PF00989 PAS fold D560_RS05235 PF00672 HAMP domain D560_RS05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS05235 PF00512 His Kinase A (phospho-acceptor) domain D560_RS05245 PF01189 16S rRNA methyltransferase RsmB/F D560_RS05245 PF01029 NusB family D560_RS05250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS05250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS05250 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS05255 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS05260 PF01610 Transposase D560_RS05260 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS05260 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS05280 PF00392 Bacterial regulatory proteins, gntR family D560_RS05280 PF07702 UTRA domain D560_RS05295 PF03466 LysR substrate binding domain D560_RS05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS05300 PF00171 Aldehyde dehydrogenase family D560_RS05320 PF13419 Haloacid dehalogenase-like hydrolase D560_RS05340 PF02911 Formyl transferase, C-terminal domain D560_RS05340 PF00551 Formyl transferase D560_RS05345 PF01327 Polypeptide deformylase D560_RS05350 PF00266 Aminotransferase class-V D560_RS05355 PF01037 Lrp/AsnC ligand binding domain D560_RS05360 PF04328 Selenoprotein, putative D560_RS05370 PF17200 Single Cache domain 2 D560_RS05370 PF07730 Histidine kinase D560_RS05375 PF00072 Response regulator receiver domain D560_RS05375 PF00196 Bacterial regulatory proteins, luxR family D560_RS05385 PF00682 HMGL-like D560_RS05395 PF00497 Bacterial extracellular solute-binding proteins, family 3 D560_RS05400 PF00155 Aminotransferase class I and II D560_RS05410 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS05415 PF00593 TonB dependent receptor D560_RS05415 PF07715 TonB-dependent Receptor Plug Domain D560_RS05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS05425 PF03466 LysR substrate binding domain D560_RS05435 PF03466 LysR substrate binding domain D560_RS05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS05440 PF13458 Periplasmic binding protein D560_RS05450 PF00005 ABC transporter D560_RS05450 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS05455 PF00005 ABC transporter D560_RS05465 PF00501 AMP-binding enzyme D560_RS05470 PF00005 ABC transporter D560_RS05470 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS05475 PF02653 Branched-chain amino acid transport system / permease component D560_RS05490 PF00005 ABC transporter D560_RS05495 PF00501 AMP-binding enzyme D560_RS05495 PF14535 AMP-binding enzyme C-terminal domain D560_RS05505 PF04143 Sulphur transport D560_RS05515 PF00753 Metallo-beta-lactamase superfamily D560_RS05540 PF06965 Na+/H+ antiporter 1 D560_RS05550 PF01475 Ferric uptake regulator family D560_RS05555 PF02311 AraC-like ligand binding domain D560_RS05555 PF12833 Helix-turn-helix domain D560_RS05560 PF01048 Phosphorylase superfamily D560_RS05565 PF03167 Uracil DNA glycosylase superfamily D560_RS05570 PF00271 Helicase conserved C-terminal domain D560_RS05570 PF00270 DEAD/DEAH box helicase D560_RS05575 PF01610 Transposase D560_RS05575 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS05575 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS05585 PF01743 Poly A polymerase head domain D560_RS05585 PF12627 Probable RNA and SrmB- binding site of polymerase A D560_RS05590 PF14718 Soluble lytic murein transglycosylase L domain D560_RS05590 PF01464 Transglycosylase SLT domain D560_RS05595 PF01812 5-formyltetrahydrofolate cyclo-ligase family D560_RS05610 PF01841 Transglutaminase-like superfamily D560_RS05610 PF08379 Bacterial transglutaminase-like N-terminal region D560_RS05645 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS05650 PF02219 Methylenetetrahydrofolate reductase D560_RS05655 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV D560_RS05660 PF05221 S-adenosyl-L-homocysteine hydrolase D560_RS05660 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D560_RS05665 PF13439 Glycosyltransferase Family 4 D560_RS05665 PF00534 Glycosyl transferases group 1 D560_RS05680 PF00557 Metallopeptidase family M24 D560_RS05685 PF00438 S-adenosylmethionine synthetase, N-terminal domain D560_RS05685 PF02772 S-adenosylmethionine synthetase, central domain D560_RS05685 PF02773 S-adenosylmethionine synthetase, C-terminal domain D560_RS05695 PF03279 Bacterial lipid A biosynthesis acyltransferase D560_RS05700 PF01678 Diaminopimelate epimerase D560_RS05710 PF00589 Phage integrase family D560_RS05710 PF02899 Phage integrase, N-terminal SAM-like domain D560_RS05730 PF01297 Zinc-uptake complex component A periplasmic D560_RS05735 PF00950 ABC 3 transport family D560_RS05740 PF00005 ABC transporter D560_RS05745 PF01475 Ferric uptake regulator family D560_RS05750 PF02492 CobW/HypB/UreG, nucleotide-binding domain D560_RS05750 PF07683 Cobalamin synthesis protein cobW C-terminal domain D560_RS05755 PF01258 Prokaryotic dksA/traR C4-type zinc finger D560_RS05760 PF00227 Proteasome subunit D560_RS05765 PF07724 AAA domain (Cdc48 subfamily) D560_RS05765 PF00004 ATPase family associated with various cellular activities (AAA) D560_RS05775 PF01923 Cobalamin adenosyltransferase D560_RS05780 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D560_RS05780 PF04055 Radical SAM superfamily D560_RS05785 PF03099 Biotin/lipoate A/B protein ligase family D560_RS05790 PF04359 Protein of unknown function (DUF493) D560_RS05795 PF01063 Amino-transferase class IV D560_RS05800 PF07943 Penicillin-binding protein 5, C-terminal domain D560_RS05800 PF00768 D-alanyl-D-alanine carboxypeptidase D560_RS05820 PF00005 ABC transporter D560_RS05825 PF02405 Permease MlaE D560_RS05835 PF03309 Type III pantothenate kinase D560_RS05840 PF00534 Glycosyl transferases group 1 D560_RS05840 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D560_RS05845 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D560_RS05850 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D560_RS05855 PF00483 Nucleotidyl transferase D560_RS05860 PF04321 RmlD substrate binding domain D560_RS05865 PF16363 GDP-mannose 4,6 dehydratase D560_RS05880 PF07690 Major Facilitator Superfamily D560_RS05890 PF13091 PLD-like domain D560_RS05895 PF03372 Endonuclease/Exonuclease/phosphatase family D560_RS05900 PF01336 OB-fold nucleic acid binding domain D560_RS05900 PF00152 tRNA synthetases class II (D, K and N) D560_RS05900 PF02938 GAD domain D560_RS05920 PF05199 GMC oxidoreductase D560_RS05920 PF00732 GMC oxidoreductase D560_RS05930 PF00701 Dihydrodipicolinate synthetase family D560_RS05935 PF13185 GAF domain D560_RS05940 PF00155 Aminotransferase class I and II D560_RS05945 PF01040 UbiA prenyltransferase family D560_RS05955 PF00392 Bacterial regulatory proteins, gntR family D560_RS05955 PF07729 FCD domain D560_RS05960 PF01274 Malate synthase D560_RS05965 PF00005 ABC transporter D560_RS05965 PF08402 TOBE domain D560_RS05980 PF00512 His Kinase A (phospho-acceptor) domain D560_RS05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS05985 PF00486 Transcriptional regulatory protein, C terminal D560_RS05985 PF00072 Response regulator receiver domain D560_RS05995 PF00132 Bacterial transferase hexapeptide (six repeats) D560_RS06005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D560_RS06010 PF02350 UDP-N-acetylglucosamine 2-epimerase D560_RS06020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D560_RS06025 PF02397 Bacterial sugar transferase D560_RS06030 PF02719 Polysaccharide biosynthesis protein D560_RS06045 PF01131 DNA topoisomerase D560_RS06045 PF01751 Toprim domain D560_RS06050 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS06050 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS06050 PF01610 Transposase D560_RS06060 PF00005 ABC transporter D560_RS06075 PF00171 Aldehyde dehydrogenase family D560_RS06080 PF13683 Integrase core domain D560_RS06080 PF13276 HTH-like domain D560_RS06085 PF01527 Transposase D560_RS06100 PF01037 Lrp/AsnC ligand binding domain D560_RS06105 PF01062 Bestrophin, RFP-TM, chloride channel D560_RS06115 PF01610 Transposase D560_RS06115 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS06115 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS06120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D560_RS06125 PF13276 HTH-like domain D560_RS06125 PF13683 Integrase core domain D560_RS06130 PF13683 Integrase core domain D560_RS06130 PF13276 HTH-like domain D560_RS06135 PF01527 Transposase D560_RS06145 PF00204 DNA gyrase B D560_RS06145 PF01751 Toprim domain D560_RS06145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS06145 PF18053 DNA gyrase B subunit insert domain D560_RS06145 PF00986 DNA gyrase B subunit, carboxyl terminus D560_RS06150 PF00712 DNA polymerase III beta subunit, N-terminal domain D560_RS06150 PF02767 DNA polymerase III beta subunit, central domain D560_RS06150 PF02768 DNA polymerase III beta subunit, C-terminal domain D560_RS06155 PF11638 DnaA N-terminal domain D560_RS06155 PF08299 Bacterial dnaA protein helix-turn-helix D560_RS06155 PF00308 Bacterial dnaA protein D560_RS06160 PF00468 Ribosomal protein L34 D560_RS06165 PF00825 Ribonuclease P D560_RS06170 PF01809 Putative membrane protein insertion efficiency factor D560_RS06175 PF14849 YidC periplasmic domain D560_RS06175 PF02096 60Kd inner membrane protein D560_RS06180 PF00141 Peroxidase D560_RS06185 PF01546 Peptidase family M20/M25/M40 D560_RS06185 PF07687 Peptidase dimerisation domain D560_RS06190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS06190 PF00005 ABC transporter D560_RS06195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS06195 PF00005 ABC transporter D560_RS06200 PF12911 N-terminal TM domain of oligopeptide transport permease C D560_RS06200 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS06205 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS06210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D560_RS06215 PF10396 GTP-binding protein TrmE N-terminus D560_RS06215 PF01926 50S ribosome-binding GTPase D560_RS06215 PF12631 MnmE helical domain D560_RS06220 PF00326 Prolyl oligopeptidase family D560_RS06220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D560_RS06225 PF03466 LysR substrate binding domain D560_RS06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS06235 PF00072 Response regulator receiver domain D560_RS06235 PF00486 Transcriptional regulatory protein, C terminal D560_RS06240 PF00512 His Kinase A (phospho-acceptor) domain D560_RS06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS06255 PF01970 Tripartite tricarboxylate transporter TctA family D560_RS06260 PF00155 Aminotransferase class I and II D560_RS06265 PF00313 'Cold-shock' DNA-binding domain D560_RS06275 PF02527 rRNA small subunit methyltransferase G D560_RS06280 PF13614 AAA domain D560_RS06290 PF00710 Asparaginase, N-terminal D560_RS06290 PF17763 Glutaminase/Asparaginase C-terminal domain D560_RS06310 PF03144 Elongation factor Tu domain 2 D560_RS06310 PF00009 Elongation factor Tu GTP binding domain D560_RS06310 PF03143 Elongation factor Tu C-terminal domain D560_RS06320 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D560_RS06325 PF00467 KOW motif D560_RS06325 PF02357 Transcription termination factor nusG D560_RS06330 PF00298 Ribosomal protein L11, RNA binding domain D560_RS06330 PF03946 Ribosomal protein L11, N-terminal domain D560_RS06335 PF00687 Ribosomal protein L1p/L10e family D560_RS06340 PF00466 Ribosomal protein L10 D560_RS06345 PF00542 Ribosomal protein L7/L12 C-terminal domain D560_RS06345 PF16320 Ribosomal protein L7/L12 dimerisation domain D560_RS06350 PF04561 RNA polymerase Rpb2, domain 2 D560_RS06350 PF10385 RNA polymerase beta subunit external 1 domain D560_RS06350 PF00562 RNA polymerase Rpb2, domain 6 D560_RS06350 PF04563 RNA polymerase beta subunit D560_RS06350 PF04565 RNA polymerase Rpb2, domain 3 D560_RS06350 PF04560 RNA polymerase Rpb2, domain 7 D560_RS06355 PF05000 RNA polymerase Rpb1, domain 4 D560_RS06355 PF04998 RNA polymerase Rpb1, domain 5 D560_RS06355 PF04983 RNA polymerase Rpb1, domain 3 D560_RS06355 PF00623 RNA polymerase Rpb1, domain 2 D560_RS06355 PF04997 RNA polymerase Rpb1, domain 1 D560_RS06390 PF00164 Ribosomal protein S12/S23 D560_RS06395 PF00177 Ribosomal protein S7p/S5e D560_RS06400 PF14492 Elongation Factor G, domain II D560_RS06400 PF03764 Elongation factor G, domain IV D560_RS06400 PF00679 Elongation factor G C-terminus D560_RS06400 PF00009 Elongation factor Tu GTP binding domain D560_RS06400 PF03144 Elongation factor Tu domain 2 D560_RS06405 PF03143 Elongation factor Tu C-terminal domain D560_RS06405 PF03144 Elongation factor Tu domain 2 D560_RS06405 PF00009 Elongation factor Tu GTP binding domain D560_RS06410 PF00338 Ribosomal protein S10p/S20e D560_RS06415 PF00297 Ribosomal protein L3 D560_RS06420 PF00573 Ribosomal protein L4/L1 family D560_RS06425 PF00276 Ribosomal protein L23 D560_RS06430 PF00181 Ribosomal Proteins L2, RNA binding domain D560_RS06430 PF03947 Ribosomal Proteins L2, C-terminal domain D560_RS06435 PF00203 Ribosomal protein S19 D560_RS06440 PF00237 Ribosomal protein L22p/L17e D560_RS06445 PF00189 Ribosomal protein S3, C-terminal domain D560_RS06445 PF07650 KH domain D560_RS06450 PF00252 Ribosomal protein L16p/L10e D560_RS06455 PF00831 Ribosomal L29 protein D560_RS06460 PF00366 Ribosomal protein S17 D560_RS06470 PF11862 Domain of unknown function (DUF3382) D560_RS06470 PF02653 Branched-chain amino acid transport system / permease component D560_RS06475 PF00005 ABC transporter D560_RS06485 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS06485 PF00005 ABC transporter D560_RS06505 PF00171 Aldehyde dehydrogenase family D560_RS06515 PF00238 Ribosomal protein L14p/L23e D560_RS06520 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D560_RS06530 PF00253 Ribosomal protein S14p/S29e D560_RS06535 PF00410 Ribosomal protein S8 D560_RS06540 PF00347 Ribosomal protein L6 D560_RS06545 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D560_RS06550 PF00333 Ribosomal protein S5, N-terminal domain D560_RS06550 PF03719 Ribosomal protein S5, C-terminal domain D560_RS06555 PF00327 Ribosomal protein L30p/L7e D560_RS06560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D560_RS06565 PF00344 SecY translocase D560_RS06570 PF01176 Translation initiation factor 1A / IF-1 D560_RS06575 PF00444 Ribosomal protein L36 D560_RS06580 PF00416 Ribosomal protein S13/S18 D560_RS06585 PF00411 Ribosomal protein S11 D560_RS06590 PF00163 Ribosomal protein S4/S9 N-terminal domain D560_RS06590 PF01479 S4 domain D560_RS06595 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D560_RS06595 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D560_RS06595 PF01000 RNA polymerase Rpb3/RpoA insert domain D560_RS06600 PF01196 Ribosomal protein L17 D560_RS06605 PF01230 HIT domain D560_RS06610 PF03091 CutA1 divalent ion tolerance protein D560_RS06615 PF02683 Cytochrome C biogenesis protein transmembrane region D560_RS06615 PF11412 Disulphide bond corrector protein DsbC D560_RS06625 PF00490 Delta-aminolevulinic acid dehydratase D560_RS06630 PF01926 50S ribosome-binding GTPase D560_RS06635 PF00034 Cytochrome c D560_RS06645 PF01578 Cytochrome C assembly protein D560_RS06650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D560_RS06650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D560_RS06655 PF01491 Frataxin-like domain D560_RS06660 PF00905 Penicillin binding protein transpeptidase domain D560_RS06660 PF00912 Transglycosylase D560_RS06660 PF17092 Penicillin-binding protein OB-like domain D560_RS06665 PF01202 Shikimate kinase D560_RS06670 PF01761 3-dehydroquinate synthase D560_RS06675 PF01966 HD domain D560_RS06675 PF13286 Phosphohydrolase-associated domain D560_RS06685 PF00043 Glutathione S-transferase, C-terminal domain D560_RS06685 PF13417 Glutathione S-transferase, N-terminal domain D560_RS06690 PF17760 UvrA interaction domain D560_RS06690 PF17755 UvrA DNA-binding domain D560_RS06695 PF07690 Major Facilitator Superfamily D560_RS06700 PF00436 Single-strand binding protein family D560_RS06705 PF01527 Transposase D560_RS06710 PF13276 HTH-like domain D560_RS06710 PF13683 Integrase core domain D560_RS06715 PF00733 Asparagine synthase D560_RS06715 PF13537 Glutamine amidotransferase domain D560_RS06755 PF00749 tRNA synthetases class I (E and Q), catalytic domain D560_RS06760 PF04361 Protein of unknown function (DUF494) D560_RS06765 PF00593 TonB dependent receptor D560_RS06765 PF07715 TonB-dependent Receptor Plug Domain D560_RS06775 PF16868 NMT1-like family D560_RS06780 PF01168 Alanine racemase, N-terminal domain D560_RS06780 PF14031 Putative serine dehydratase domain D560_RS06785 PF00202 Aminotransferase class-III D560_RS06800 PF01039 Carboxyl transferase domain D560_RS06805 PF00108 Thiolase, N-terminal domain D560_RS06805 PF02803 Thiolase, C-terminal domain D560_RS06810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS06810 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS06810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS06815 PF09278 MerR, DNA binding D560_RS06815 PF00376 MerR family regulatory protein D560_RS06825 PF01810 LysE type translocator D560_RS06830 PF01053 Cys/Met metabolism PLP-dependent enzyme D560_RS06835 PF00563 EAL domain D560_RS06835 PF12792 CSS motif domain associated with EAL D560_RS06840 PF01323 DSBA-like thioredoxin domain D560_RS06840 PF00085 Thioredoxin D560_RS06850 PF05746 DALR anticodon binding domain D560_RS06850 PF03485 Arginyl tRNA synthetase N terminal domain D560_RS06850 PF00750 tRNA synthetases class I (R) D560_RS06865 PF01425 Amidase D560_RS06870 PF08502 LeuA allosteric (dimerisation) domain D560_RS06870 PF00682 HMGL-like D560_RS06880 PF04552 Sigma-54, DNA binding domain D560_RS06880 PF04963 Sigma-54 factor, core binding domain D560_RS06880 PF00309 Sigma-54 factor, Activator interacting domain (AID) D560_RS06890 PF00892 EamA-like transporter family D560_RS06895 PF00210 Ferritin-like domain D560_RS06905 PF00171 Aldehyde dehydrogenase family D560_RS06920 PF01883 Iron-sulfur cluster assembly protein D560_RS06930 PF07992 Pyridine nucleotide-disulphide oxidoreductase D560_RS06930 PF14759 Reductase C-terminal D560_RS06935 PF00355 Rieske [2Fe-2S] domain D560_RS06955 PF02332 Methane/Phenol/Toluene Hydroxylase D560_RS06955 PF04945 YHS domain D560_RS06980 PF02798 Glutathione S-transferase, N-terminal domain D560_RS06980 PF00043 Glutathione S-transferase, C-terminal domain D560_RS06985 PF00440 Bacterial regulatory proteins, tetR family D560_RS06985 PF16925 Tetracyclin repressor-like, C-terminal domain D560_RS07015 PF03144 Elongation factor Tu domain 2 D560_RS07015 PF16658 Class II release factor RF3, C-terminal domain D560_RS07015 PF00009 Elongation factor Tu GTP binding domain D560_RS07020 PF01810 LysE type translocator D560_RS07025 PF00271 Helicase conserved C-terminal domain D560_RS07025 PF00270 DEAD/DEAH box helicase D560_RS07035 PF04536 TPM domain D560_RS07040 PF01926 50S ribosome-binding GTPase D560_RS07040 PF12631 MnmE helical domain D560_RS07040 PF10396 GTP-binding protein TrmE N-terminus D560_RS07045 PF11067 Protein of unknown function (DUF2868) D560_RS07060 PF01425 Amidase D560_RS07070 PF04386 Stringent starvation protein B D560_RS07075 PF00043 Glutathione S-transferase, C-terminal domain D560_RS07075 PF02798 Glutathione S-transferase, N-terminal domain D560_RS07080 PF02167 Cytochrome C1 family D560_RS07085 PF00033 Cytochrome b/b6/petB D560_RS07085 PF00032 Cytochrome b(C-terminal)/b6/petD D560_RS07090 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D560_RS07090 PF00355 Rieske [2Fe-2S] domain D560_RS07095 PF01741 Large-conductance mechanosensitive channel, MscL D560_RS07100 PF01784 NIF3 (NGG1p interacting factor 3) D560_RS07105 PF13180 PDZ domain D560_RS07110 PF00902 Sec-independent protein translocase protein (TatC) D560_RS07120 PF02416 mttA/Hcf106 family D560_RS07130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D560_RS07135 PF01502 Phosphoribosyl-AMP cyclohydrolase D560_RS07140 PF00977 Histidine biosynthesis protein D560_RS07145 PF00977 Histidine biosynthesis protein D560_RS07150 PF00117 Glutamine amidotransferase class-I D560_RS07155 PF00475 Imidazoleglycerol-phosphate dehydratase D560_RS07160 PF00155 Aminotransferase class I and II D560_RS07165 PF00815 Histidinol dehydrogenase D560_RS07170 PF01634 ATP phosphoribosyltransferase D560_RS07175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D560_RS07185 PF01061 ABC-2 type transporter D560_RS07190 PF00005 ABC transporter D560_RS07200 PF04333 MlaA lipoprotein D560_RS07210 PF02405 Permease MlaE D560_RS07220 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS07225 PF03922 OmpW family D560_RS07230 PF07992 Pyridine nucleotide-disulphide oxidoreductase D560_RS07230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D560_RS07235 PF00310 Glutamine amidotransferases class-II D560_RS07235 PF01645 Conserved region in glutamate synthase D560_RS07235 PF01493 GXGXG motif D560_RS07235 PF04898 Glutamate synthase central domain D560_RS07240 PF01610 Transposase D560_RS07240 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS07240 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS07250 PF08240 Alcohol dehydrogenase GroES-like domain D560_RS07250 PF00107 Zinc-binding dehydrogenase D560_RS07255 PF00756 Putative esterase D560_RS07265 PF03625 Domain of unknown function DUF302 D560_RS07265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D560_RS07270 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS07270 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS07270 PF01610 Transposase D560_RS07275 PF04542 Sigma-70 region 2 D560_RS07275 PF00140 Sigma-70 factor, region 1.2 D560_RS07275 PF04545 Sigma-70, region 4 D560_RS07280 PF00149 Calcineurin-like phosphoesterase D560_RS07290 PF00293 NUDIX domain D560_RS07295 PF01527 Transposase D560_RS07300 PF13683 Integrase core domain D560_RS07300 PF13276 HTH-like domain D560_RS07305 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D560_RS07305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D560_RS07315 PF00115 Cytochrome C and Quinol oxidase polypeptide I D560_RS07325 PF00510 Cytochrome c oxidase subunit III D560_RS07345 PF02628 Cytochrome oxidase assembly protein D560_RS07350 PF01040 UbiA prenyltransferase family D560_RS07355 PF02630 SCO1/SenC D560_RS07385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D560_RS07385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D560_RS07385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D560_RS07395 PF01037 Lrp/AsnC ligand binding domain D560_RS07400 PF01380 SIS domain D560_RS07435 PF03466 LysR substrate binding domain D560_RS07435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS07440 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D560_RS07445 PF13378 Enolase C-terminal domain-like D560_RS07445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D560_RS07450 PF00701 Dihydrodipicolinate synthetase family D560_RS07455 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS07460 PF00884 Sulfatase D560_RS07460 PF12411 Choline sulfatase enzyme C terminal D560_RS07475 PF01527 Transposase D560_RS07480 PF13683 Integrase core domain D560_RS07480 PF13276 HTH-like domain D560_RS07485 PF02653 Branched-chain amino acid transport system / permease component D560_RS07490 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS07490 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS07490 PF01610 Transposase D560_RS07500 PF07969 Amidohydrolase family D560_RS07505 PF05995 Cysteine dioxygenase type I D560_RS07510 PF01070 FMN-dependent dehydrogenase D560_RS07515 PF00708 Acylphosphatase D560_RS07520 PF08361 MAATS-type transcriptional repressor, C-terminal region D560_RS07520 PF00440 Bacterial regulatory proteins, tetR family D560_RS07525 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS07535 PF09339 IclR helix-turn-helix domain D560_RS07535 PF01614 Bacterial transcriptional regulator D560_RS07545 PF13683 Integrase core domain D560_RS07545 PF13276 HTH-like domain D560_RS07550 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS07555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D560_RS07555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D560_RS07560 PF07470 Glycosyl Hydrolase Family 88 D560_RS07565 PF02515 CoA-transferase family III D560_RS07570 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS07570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS07570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS07575 PF02515 CoA-transferase family III D560_RS07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS07590 PF03466 LysR substrate binding domain D560_RS07595 PF02627 Carboxymuconolactone decarboxylase family D560_RS07600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D560_RS07600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D560_RS07605 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS07610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS07610 PF03466 LysR substrate binding domain D560_RS07625 PF00920 Dehydratase family D560_RS07630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D560_RS07630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D560_RS07635 PF14759 Reductase C-terminal D560_RS07635 PF07992 Pyridine nucleotide-disulphide oxidoreductase D560_RS07645 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D560_RS07650 PF13609 Gram-negative porin D560_RS07655 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS07655 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS07655 PF01610 Transposase D560_RS07665 PF00012 Hsp70 protein D560_RS07670 PF00990 Diguanylate cyclase, GGDEF domain D560_RS07670 PF00563 EAL domain D560_RS07670 PF03707 Bacterial signalling protein N terminal repeat D560_RS07675 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS07675 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS07675 PF01610 Transposase D560_RS07685 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D560_RS07685 PF02805 Metal binding domain of Ada D560_RS07685 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D560_RS07685 PF12833 Helix-turn-helix domain D560_RS07690 PF13532 2OG-Fe(II) oxygenase superfamily D560_RS07700 PF04463 Protein of unknown function (DUF523) D560_RS07705 PF01494 FAD binding domain D560_RS07710 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS07715 PF01047 MarR family D560_RS07720 PF00005 ABC transporter D560_RS07725 PF01032 FecCD transport family D560_RS07730 PF01497 Periplasmic binding protein D560_RS07735 PF05171 Haemin-degrading HemS.ChuX domain D560_RS07745 PF16220 Domain of unknown function (DUF4880) D560_RS07745 PF04773 FecR protein D560_RS07750 PF04542 Sigma-70 region 2 D560_RS07750 PF08281 Sigma-70, region 4 D560_RS07770 PF03061 Thioesterase superfamily D560_RS07780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D560_RS07780 PF01568 Molydopterin dinucleotide binding domain D560_RS07780 PF00384 Molybdopterin oxidoreductase D560_RS07785 PF01568 Molydopterin dinucleotide binding domain D560_RS07785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D560_RS07785 PF00384 Molybdopterin oxidoreductase D560_RS07790 PF13247 4Fe-4S dicluster domain D560_RS07790 PF09163 Formate dehydrogenase N, transmembrane D560_RS07790 PF12800 4Fe-4S binding domain D560_RS07795 PF01292 Prokaryotic cytochrome b561 D560_RS07800 PF04216 Protein involved in formate dehydrogenase formation D560_RS07805 PF03841 L-seryl-tRNA selenium transferase D560_RS07805 PF12390 Selenocysteine synthase N terminal D560_RS07810 PF09107 Elongation factor SelB, winged helix D560_RS07810 PF09106 Elongation factor SelB, winged helix D560_RS07810 PF03144 Elongation factor Tu domain 2 D560_RS07810 PF00009 Elongation factor Tu GTP binding domain D560_RS07820 PF00586 AIR synthase related protein, N-terminal domain D560_RS07820 PF02769 AIR synthase related protein, C-terminal domain D560_RS07835 PF01323 DSBA-like thioredoxin domain D560_RS07845 PF00218 Indole-3-glycerol phosphate synthase D560_RS07850 PF02885 Glycosyl transferase family, helical bundle domain D560_RS07850 PF00591 Glycosyl transferase family, a/b domain D560_RS07855 PF00117 Glutamine amidotransferase class-I D560_RS07860 PF00425 chorismate binding enzyme D560_RS07860 PF04715 Anthranilate synthase component I, N terminal region D560_RS07865 PF13419 Haloacid dehalogenase-like hydrolase D560_RS07870 PF00834 Ribulose-phosphate 3 epimerase family D560_RS07875 PF04379 ApaG domain D560_RS07880 PF06725 3D domain D560_RS07880 PF03562 MltA specific insert domain D560_RS07885 PF01494 FAD binding domain D560_RS07890 PF13098 Thioredoxin-like domain D560_RS07890 PF10411 Disulfide bond isomerase protein N-terminus D560_RS07895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D560_RS07895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D560_RS07895 PF01842 ACT domain D560_RS07900 PF01171 PP-loop family D560_RS07920 PF00378 Enoyl-CoA hydratase/isomerase D560_RS07935 PF00119 ATP synthase A chain D560_RS07940 PF00137 ATP synthase subunit C D560_RS07945 PF00430 ATP synthase B/B' CF(0) D560_RS07950 PF00213 ATP synthase delta (OSCP) subunit D560_RS07955 PF02874 ATP synthase alpha/beta family, beta-barrel domain D560_RS07955 PF00306 ATP synthase alpha/beta chain, C terminal domain D560_RS07955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D560_RS07960 PF00231 ATP synthase D560_RS07965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D560_RS07965 PF02874 ATP synthase alpha/beta family, beta-barrel domain D560_RS07970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D560_RS07995 PF01208 Uroporphyrinogen decarboxylase (URO-D) D560_RS08000 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D560_RS08000 PF18074 Primosomal protein N C-terminal domain D560_RS08000 PF17764 3′ DNA-binding domain (3′BD) D560_RS08000 PF00271 Helicase conserved C-terminal domain D560_RS08000 PF00270 DEAD/DEAH box helicase D560_RS08005 PF00580 UvrD/REP helicase N-terminal domain D560_RS08005 PF13361 UvrD-like helicase C-terminal domain D560_RS08010 PF07687 Peptidase dimerisation domain D560_RS08010 PF01546 Peptidase family M20/M25/M40 D560_RS08020 PF00005 ABC transporter D560_RS08020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS08025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS08025 PF00005 ABC transporter D560_RS08030 PF12911 N-terminal TM domain of oligopeptide transport permease C D560_RS08030 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS08040 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D560_RS08055 PF01256 Carbohydrate kinase D560_RS08060 PF00378 Enoyl-CoA hydratase/isomerase D560_RS08065 PF00378 Enoyl-CoA hydratase/isomerase D560_RS08070 PF03060 Nitronate monooxygenase D560_RS08080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS08080 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS08080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS08085 PF02515 CoA-transferase family III D560_RS08090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D560_RS08090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D560_RS08090 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain D560_RS08095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D560_RS08105 PF04262 Glutamate-cysteine ligase D560_RS08110 PF12147 Putative methyltransferase D560_RS08110 PF12146 Serine aminopeptidase, S33 D560_RS08130 PF02615 Malate/L-lactate dehydrogenase D560_RS08135 PF00561 alpha/beta hydrolase fold D560_RS08140 PF07021 Methionine biosynthesis protein MetW D560_RS08140 PF00561 alpha/beta hydrolase fold D560_RS08145 PF07690 Major Facilitator Superfamily D560_RS08150 PF13609 Gram-negative porin D560_RS08165 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D560_RS08165 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D560_RS08170 PF03372 Endonuclease/Exonuclease/phosphatase family D560_RS08175 PF00156 Phosphoribosyl transferase domain D560_RS08180 PF02934 GatB/GatE catalytic domain D560_RS08180 PF02637 GatB domain D560_RS08185 PF01425 Amidase D560_RS08190 PF02686 Glu-tRNAGln amidotransferase C subunit D560_RS08200 PF04085 rod shape-determining protein MreC D560_RS08210 PF03717 Penicillin-binding Protein dimerisation domain D560_RS08210 PF00905 Penicillin binding protein transpeptidase domain D560_RS08215 PF01098 Cell cycle protein D560_RS08220 PF02615 Malate/L-lactate dehydrogenase D560_RS08225 PF00939 Sodium:sulfate symporter transmembrane region D560_RS08230 PF00440 Bacterial regulatory proteins, tetR family D560_RS08240 PF00696 Amino acid kinase family D560_RS08245 PF03180 NLPA lipoprotein D560_RS08250 PF00578 AhpC/TSA family D560_RS08255 PF04972 BON domain D560_RS08260 PF13580 SIS domain D560_RS08265 PF02021 Uncharacterised protein family UPF0102 D560_RS08270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D560_RS08275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D560_RS08275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D560_RS08280 PF03330 Lytic transglycolase D560_RS08280 PF05036 Sporulation related domain D560_RS08285 PF03668 P-loop ATPase protein family D560_RS08295 PF00034 Cytochrome c D560_RS08295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D560_RS08300 PF02603 HPr Serine kinase N terminus D560_RS08300 PF07475 HPr Serine kinase C-terminal domain D560_RS08305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D560_RS08310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D560_RS08315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS08315 PF03466 LysR substrate binding domain D560_RS08320 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS08330 PF00005 ABC transporter D560_RS08350 PF01380 SIS domain D560_RS08350 PF00571 CBS domain D560_RS08355 PF02222 ATP-grasp domain D560_RS08370 PF01654 Cytochrome bd terminal oxidase subunit I D560_RS08375 PF02322 Cytochrome bd terminal oxidase subunit II D560_RS08380 PF08173 Membrane bound YbgT-like protein D560_RS08395 PF00156 Phosphoribosyl transferase domain D560_RS08400 PF03466 LysR substrate binding domain D560_RS08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS08410 PF00585 C-terminal regulatory domain of Threonine dehydratase D560_RS08410 PF00291 Pyridoxal-phosphate dependent enzyme D560_RS08430 PF03746 LamB/YcsF family D560_RS08435 PF02626 Carboxyltransferase domain, subdomain A and B D560_RS08440 PF02682 Carboxyltransferase domain, subdomain C and D D560_RS08450 PF03466 LysR substrate binding domain D560_RS08450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS08455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D560_RS08455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D560_RS08460 PF00989 PAS fold D560_RS08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS08460 PF00512 His Kinase A (phospho-acceptor) domain D560_RS08460 PF11808 Phosphate regulon sensor protein PhoR D560_RS08465 PF00072 Response regulator receiver domain D560_RS08465 PF00486 Transcriptional regulatory protein, C terminal D560_RS08470 PF01209 ubiE/COQ5 methyltransferase family D560_RS08485 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS08485 PF01610 Transposase D560_RS08485 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS08490 PF01061 ABC-2 type transporter D560_RS08495 PF00005 ABC transporter D560_RS08505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D560_RS08505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D560_RS08535 PF02397 Bacterial sugar transferase D560_RS08550 PF03109 ABC1 family D560_RS08555 PF01527 Transposase D560_RS08560 PF13683 Integrase core domain D560_RS08560 PF13276 HTH-like domain D560_RS08570 PF01467 Cytidylyltransferase-like D560_RS08575 PF02321 Outer membrane efflux protein D560_RS08585 PF08543 Phosphomethylpyrimidine kinase D560_RS08590 PF05690 Thiazole biosynthesis protein ThiG D560_RS08600 PF07715 TonB-dependent Receptor Plug Domain D560_RS08600 PF00593 TonB dependent receptor D560_RS08605 PF02574 Homocysteine S-methyltransferase D560_RS08605 PF02607 B12 binding domain D560_RS08605 PF02310 B12 binding domain D560_RS08605 PF00809 Pterin binding enzyme D560_RS08605 PF02965 Vitamin B12 dependent methionine synthase, activation domain D560_RS08620 PF14815 NUDIX domain D560_RS08620 PF00633 Helix-hairpin-helix motif D560_RS08620 PF10576 Iron-sulfur binding domain of endonuclease III D560_RS08620 PF00730 HhH-GPD superfamily base excision DNA repair protein D560_RS08630 PF03975 CheD chemotactic sensory transduction D560_RS08635 PF18075 FtsX extracellular domain D560_RS08640 PF00005 ABC transporter D560_RS08645 PF00497 Bacterial extracellular solute-binding proteins, family 3 D560_RS08650 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS08655 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS08660 PF00005 ABC transporter D560_RS08665 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS08675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D560_RS08675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D560_RS08690 PF07690 Major Facilitator Superfamily D560_RS08700 PF02616 Segregation and condensation protein ScpA D560_RS08705 PF02569 Pantoate-beta-alanine ligase D560_RS08715 PF06750 Bacterial Peptidase A24 N-terminal domain D560_RS08715 PF01478 Type IV leader peptidase family D560_RS08720 PF01121 Dephospho-CoA kinase D560_RS08725 PF07072 Cell division protein D560_RS08730 PF13533 Biotin-lipoyl like D560_RS08735 PF00873 AcrB/AcrD/AcrF family D560_RS08740 PF00873 AcrB/AcrD/AcrF family D560_RS08745 PF02321 Outer membrane efflux protein D560_RS08750 PF16970 Type-1 fimbrial protein, A D560_RS08755 PF16970 Type-1 fimbrial protein, A D560_RS08760 PF00293 NUDIX domain D560_RS08770 PF01960 ArgJ family D560_RS08780 PF01047 MarR family D560_RS08795 PF02653 Branched-chain amino acid transport system / permease component D560_RS08800 PF02653 Branched-chain amino acid transport system / permease component D560_RS08800 PF11862 Domain of unknown function (DUF3382) D560_RS08805 PF00005 ABC transporter D560_RS08805 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS08810 PF00005 ABC transporter D560_RS08830 PF09345 Domain of unknown function (DUF1987) D560_RS08835 PF00990 Diguanylate cyclase, GGDEF domain D560_RS08840 PF01494 FAD binding domain D560_RS08845 PF00106 short chain dehydrogenase D560_RS08855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS08855 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS08855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS08860 PF00501 AMP-binding enzyme D560_RS08860 PF13193 AMP-binding enzyme C-terminal domain D560_RS08880 PF01610 Transposase D560_RS08880 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS08880 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS08885 PF00202 Aminotransferase class-III D560_RS08890 PF02581 Thiamine monophosphate synthase D560_RS08895 PF08543 Phosphomethylpyrimidine kinase D560_RS08905 PF03652 Holliday junction resolvase D560_RS08915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D560_RS08915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D560_RS08920 PF01979 Amidohydrolase family D560_RS08925 PF01979 Amidohydrolase family D560_RS08930 PF01553 Acyltransferase D560_RS08935 PF00149 Calcineurin-like phosphoesterase D560_RS08945 PF00912 Transglycosylase D560_RS08950 PF01488 Shikimate / quinate 5-dehydrogenase D560_RS08950 PF08501 Shikimate dehydrogenase substrate binding domain D560_RS08950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D560_RS08960 PF00773 RNB domain D560_RS08970 PF08245 Mur ligase middle domain D560_RS08970 PF01225 Mur ligase family, catalytic domain D560_RS08970 PF02875 Mur ligase family, glutamate ligase domain D560_RS08975 PF00578 AhpC/TSA family D560_RS08980 PF01220 Dehydroquinase class II D560_RS08985 PF00364 Biotin-requiring enzyme D560_RS08990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D560_RS08990 PF00289 Biotin carboxylase, N-terminal domain D560_RS08990 PF02785 Biotin carboxylase C-terminal domain D560_RS09005 PF00294 pfkB family carbohydrate kinase D560_RS09045 PF00268 Ribonucleotide reductase, small chain D560_RS09050 PF02867 Ribonucleotide reductase, barrel domain D560_RS09050 PF03477 ATP cone domain D560_RS09050 PF00317 Ribonucleotide reductase, all-alpha domain D560_RS09075 PF01037 Lrp/AsnC ligand binding domain D560_RS09090 PF00749 tRNA synthetases class I (E and Q), catalytic domain D560_RS09095 PF13607 Succinyl-CoA ligase like flavodoxin domain D560_RS09095 PF13380 CoA binding domain D560_RS09095 PF00583 Acetyltransferase (GNAT) family D560_RS09100 PF00005 ABC transporter D560_RS09105 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS09105 PF00005 ABC transporter D560_RS09110 PF02653 Branched-chain amino acid transport system / permease component D560_RS09110 PF11862 Domain of unknown function (DUF3382) D560_RS09120 PF02653 Branched-chain amino acid transport system / permease component D560_RS09140 PF00171 Aldehyde dehydrogenase family D560_RS09150 PF01202 Shikimate kinase D560_RS09155 PF00378 Enoyl-CoA hydratase/isomerase D560_RS09165 PF00175 Oxidoreductase NAD-binding domain D560_RS09165 PF00037 4Fe-4S binding domain D560_RS09165 PF00970 Oxidoreductase FAD-binding domain D560_RS09170 PF02230 Phospholipase/Carboxylesterase D560_RS09175 PF04751 Protein of unknown function (DUF615) D560_RS09185 PF00572 Ribosomal protein L13 D560_RS09190 PF00380 Ribosomal protein S9/S16 D560_RS09195 PF02774 Semialdehyde dehydrogenase, dimerisation domain D560_RS09195 PF01118 Semialdehyde dehydrogenase, NAD binding domain D560_RS09205 PF01521 Iron-sulphur cluster biosynthesis D560_RS09215 PF03702 Anhydro-N-acetylmuramic acid kinase D560_RS09220 PF01476 LysM domain D560_RS09220 PF01551 Peptidase family M23 D560_RS09225 PF01479 S4 domain D560_RS09225 PF00579 tRNA synthetases class I (W and Y) D560_RS09235 PF00464 Serine hydroxymethyltransferase D560_RS09240 PF03477 ATP cone domain D560_RS09245 PF01965 DJ-1/PfpI family D560_RS09255 PF01872 RibD C-terminal domain D560_RS09255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D560_RS09260 PF00677 Lumazine binding domain D560_RS09270 PF04285 Protein of unknown function (DUF444) D560_RS09290 PF03466 LysR substrate binding domain D560_RS09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS09310 PF02627 Carboxymuconolactone decarboxylase family D560_RS09320 PF01610 Transposase D560_RS09320 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS09320 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS09325 PF00083 Sugar (and other) transporter D560_RS09325 PF08946 Osmosensory transporter coiled coil D560_RS09340 PF00206 Lyase D560_RS09340 PF14698 Argininosuccinate lyase C-terminal D560_RS09345 PF00582 Universal stress protein family D560_RS09355 PF09297 NADH pyrophosphatase zinc ribbon domain D560_RS09355 PF00293 NUDIX domain D560_RS09360 PF13360 PQQ-like domain D560_RS09380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D560_RS09380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D560_RS09385 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS09395 PF00593 TonB dependent receptor D560_RS09395 PF07715 TonB-dependent Receptor Plug Domain D560_RS09410 PF01476 LysM domain D560_RS09410 PF01464 Transglycosylase SLT domain D560_RS09415 PF16123 Hydroxyacylglutathione hydrolase C-terminus D560_RS09415 PF00753 Metallo-beta-lactamase superfamily D560_RS09435 PF00873 AcrB/AcrD/AcrF family D560_RS09440 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS09440 PF01610 Transposase D560_RS09440 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS09450 PF00929 Exonuclease D560_RS09460 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS09460 PF01610 Transposase D560_RS09460 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS09465 PF13533 Biotin-lipoyl like D560_RS09470 PF00005 ABC transporter D560_RS09480 PF02321 Outer membrane efflux protein D560_RS09495 PF00535 Glycosyl transferase family 2 D560_RS09500 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase D560_RS09510 PF12146 Serine aminopeptidase, S33 D560_RS09520 PF00155 Aminotransferase class I and II D560_RS09520 PF00392 Bacterial regulatory proteins, gntR family D560_RS09530 PF00582 Universal stress protein family D560_RS09535 PF13683 Integrase core domain D560_RS09535 PF13276 HTH-like domain D560_RS09540 PF00679 Elongation factor G C-terminus D560_RS09540 PF14492 Elongation Factor G, domain II D560_RS09540 PF03764 Elongation factor G, domain IV D560_RS09540 PF03144 Elongation factor Tu domain 2 D560_RS09540 PF00009 Elongation factor Tu GTP binding domain D560_RS09565 PF00691 OmpA family D560_RS09570 PF04052 TolB amino-terminal domain D560_RS09570 PF07676 WD40-like Beta Propeller Repeat D560_RS09580 PF02472 Biopolymer transport protein ExbD/TolR D560_RS09585 PF01618 MotA/TolQ/ExbB proton channel family D560_RS09590 PF03061 Thioesterase superfamily D560_RS09595 PF03129 Anticodon binding domain D560_RS09595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D560_RS09595 PF04073 Aminoacyl-tRNA editing domain D560_RS09600 PF00293 NUDIX domain D560_RS09605 PF00486 Transcriptional regulatory protein, C terminal D560_RS09605 PF00072 Response regulator receiver domain D560_RS09610 PF00512 His Kinase A (phospho-acceptor) domain D560_RS09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS09620 PF01970 Tripartite tricarboxylate transporter TctA family D560_RS09625 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS09625 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS09625 PF01610 Transposase D560_RS09635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D560_RS09635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D560_RS09640 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS09640 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS09640 PF01610 Transposase D560_RS09645 PF01970 Tripartite tricarboxylate transporter TctA family D560_RS09670 PF01790 Prolipoprotein diacylglyceryl transferase D560_RS09675 PF00034 Cytochrome c D560_RS09680 PF01625 Peptide methionine sulfoxide reductase D560_RS09685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D560_RS09690 PF01037 Lrp/AsnC ligand binding domain D560_RS09725 PF01527 Transposase D560_RS09730 PF13276 HTH-like domain D560_RS09730 PF13683 Integrase core domain D560_RS09745 PF01546 Peptidase family M20/M25/M40 D560_RS09745 PF07687 Peptidase dimerisation domain D560_RS09750 PF01979 Amidohydrolase family D560_RS09755 PF00005 ABC transporter D560_RS09755 PF16326 ABC transporter C-terminal domain D560_RS09755 PF12848 ABC transporter D560_RS09760 PF02381 MraZ protein, putative antitoxin-like D560_RS09765 PF01795 MraW methylase family D560_RS09770 PF04999 Cell division protein FtsL D560_RS09775 PF03717 Penicillin-binding Protein dimerisation domain D560_RS09775 PF00905 Penicillin binding protein transpeptidase domain D560_RS09780 PF08245 Mur ligase middle domain D560_RS09780 PF02875 Mur ligase family, glutamate ligase domain D560_RS09785 PF00953 Glycosyl transferase family 4 D560_RS09795 PF01098 Cell cycle protein D560_RS09805 PF01225 Mur ligase family, catalytic domain D560_RS09805 PF02875 Mur ligase family, glutamate ligase domain D560_RS09805 PF08245 Mur ligase middle domain D560_RS09810 PF07478 D-ala D-ala ligase C-terminus D560_RS09810 PF01820 D-ala D-ala ligase N-terminus D560_RS09815 PF08478 POTRA domain, FtsQ-type D560_RS09815 PF03799 Cell division protein FtsQ D560_RS09820 PF02491 SHS2 domain inserted in FTSA D560_RS09825 PF00091 Tubulin/FtsZ family, GTPase domain D560_RS09825 PF12327 FtsZ family, C-terminal domain D560_RS09830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D560_RS09845 PF01551 Peptidase family M23 D560_RS09845 PF08525 Opacity-associated protein A N-terminal motif D560_RS09845 PF01476 LysM domain D560_RS09850 PF07516 SecA Wing and Scaffold domain D560_RS09850 PF02810 SEC-C motif D560_RS09850 PF01043 SecA preprotein cross-linking domain D560_RS09850 PF07517 SecA DEAD-like domain D560_RS09860 PF01610 Transposase D560_RS09860 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS09860 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS09865 PF13393 Histidyl-tRNA synthetase D560_RS09870 PF00709 Adenylosuccinate synthetase D560_RS09880 PF01165 Ribosomal protein S21 D560_RS09885 PF10410 DnaB-helicase binding domain of primase D560_RS09885 PF08278 DNA primase DnaG DnaB-binding D560_RS09885 PF01807 CHC2 zinc finger D560_RS09885 PF08275 DNA primase catalytic core, N-terminal domain D560_RS09900 PF01527 Transposase D560_RS09905 PF13683 Integrase core domain D560_RS09905 PF13276 HTH-like domain D560_RS09930 PF07238 PilZ domain D560_RS09930 PF07317 Flagellar regulator YcgR D560_RS09945 PF03466 LysR substrate binding domain D560_RS09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS09955 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS09960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D560_RS09960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D560_RS09970 PF02142 MGS-like domain D560_RS09970 PF00781 Diacylglycerol kinase catalytic domain D560_RS10000 PF13609 Gram-negative porin D560_RS10005 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D560_RS10010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D560_RS10015 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D560_RS10020 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D560_RS10030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D560_RS10030 PF10531 SLBB domain D560_RS10030 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D560_RS10035 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D560_RS10035 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D560_RS10035 PF00384 Molybdopterin oxidoreductase D560_RS10040 PF00146 NADH dehydrogenase D560_RS10045 PF12838 4Fe-4S dicluster domain D560_RS10050 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D560_RS10055 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D560_RS10060 PF00361 Proton-conducting membrane transporter D560_RS10060 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D560_RS10070 PF00361 Proton-conducting membrane transporter D560_RS10090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D560_RS10095 PF02542 YgbB family D560_RS10100 PF01610 Transposase D560_RS10100 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10100 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10105 PF02627 Carboxymuconolactone decarboxylase family D560_RS10110 PF00578 AhpC/TSA family D560_RS10120 PF00072 Response regulator receiver domain D560_RS10120 PF00486 Transcriptional regulatory protein, C terminal D560_RS10140 PF03167 Uracil DNA glycosylase superfamily D560_RS10145 PF07690 Major Facilitator Superfamily D560_RS10150 PF02463 RecF/RecN/SMC N terminal domain D560_RS10150 PF06470 SMC proteins Flexible Hinge Domain D560_RS10160 PF12826 Helix-hairpin-helix motif D560_RS10160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D560_RS10160 PF03120 NAD-dependent DNA ligase OB-fold domain D560_RS10160 PF01653 NAD-dependent DNA ligase adenylation domain D560_RS10160 PF00533 BRCA1 C Terminus (BRCT) domain D560_RS10165 PF00005 ABC transporter D560_RS10170 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS10175 PF00497 Bacterial extracellular solute-binding proteins, family 3 D560_RS10185 PF04279 Intracellular septation protein A D560_RS10190 PF01641 SelR domain D560_RS10195 PF00005 ABC transporter D560_RS10200 PF02361 Cobalt transport protein D560_RS10205 PF02632 BioY family D560_RS10220 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS10220 PF00005 ABC transporter D560_RS10225 PF00005 ABC transporter D560_RS10235 PF01063 Amino-transferase class IV D560_RS10255 PF02653 Branched-chain amino acid transport system / permease component D560_RS10265 PF13276 HTH-like domain D560_RS10265 PF13683 Integrase core domain D560_RS10270 PF13276 HTH-like domain D560_RS10270 PF13683 Integrase core domain D560_RS10275 PF01527 Transposase D560_RS10280 PF10576 Iron-sulfur binding domain of endonuclease III D560_RS10280 PF00730 HhH-GPD superfamily base excision DNA repair protein D560_RS10280 PF00633 Helix-hairpin-helix motif D560_RS10285 PF04060 Putative Fe-S cluster D560_RS10295 PF00970 Oxidoreductase FAD-binding domain D560_RS10295 PF00175 Oxidoreductase NAD-binding domain D560_RS10300 PF11953 Domain of unknown function (DUF3470) D560_RS10300 PF00037 4Fe-4S binding domain D560_RS10305 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D560_RS10305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D560_RS10310 PF01042 Endoribonuclease L-PSP D560_RS10320 PF06167 Glucose-regulated metallo-peptidase M90 D560_RS10325 PF04607 Region found in RelA / SpoT proteins D560_RS10325 PF13291 ACT domain D560_RS10325 PF02824 TGS domain D560_RS10330 PF07690 Major Facilitator Superfamily D560_RS10335 PF01546 Peptidase family M20/M25/M40 D560_RS10335 PF07687 Peptidase dimerisation domain D560_RS10340 PF00291 Pyridoxal-phosphate dependent enzyme D560_RS10345 PF00290 Tryptophan synthase alpha chain D560_RS10350 PF01039 Carboxyl transferase domain D560_RS10350 PF17848 Acetyl-coA carboxylase zinc finger domain D560_RS10355 PF09411 Lipid A 3-O-deacylase (PagL) D560_RS10360 PF01527 Transposase D560_RS10365 PF13683 Integrase core domain D560_RS10365 PF13276 HTH-like domain D560_RS10370 PF13276 HTH-like domain D560_RS10370 PF13683 Integrase core domain D560_RS10375 PF12111 Polyribonucleotide phosphorylase C terminal D560_RS10375 PF10150 Ribonuclease E/G family D560_RS10375 PF00575 S1 RNA binding domain D560_RS10380 PF00849 RNA pseudouridylate synthase D560_RS10380 PF01479 S4 domain D560_RS10385 PF13419 Haloacid dehalogenase-like hydrolase D560_RS10390 PF00174 Oxidoreductase molybdopterin binding domain D560_RS10395 PF01794 Ferric reductase like transmembrane component D560_RS10400 PF01510 N-acetylmuramoyl-L-alanine amidase D560_RS10405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D560_RS10410 PF02545 Maf-like protein D560_RS10415 PF02620 Large ribosomal RNA subunit accumulation protein YceD D560_RS10420 PF01783 Ribosomal L32p protein family D560_RS10425 PF02504 Fatty acid synthesis protein D560_RS10430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D560_RS10430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D560_RS10435 PF00698 Acyl transferase domain D560_RS10445 PF00550 Phosphopantetheine attachment site D560_RS10450 PF00109 Beta-ketoacyl synthase, N-terminal domain D560_RS10450 PF02801 Beta-ketoacyl synthase, C-terminal domain D560_RS10460 PF08281 Sigma-70, region 4 D560_RS10460 PF04542 Sigma-70 region 2 D560_RS10470 PF13180 PDZ domain D560_RS10475 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10475 PF01610 Transposase D560_RS10475 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10485 PF00009 Elongation factor Tu GTP binding domain D560_RS10485 PF06421 GTP-binding protein LepA C-terminus D560_RS10485 PF03144 Elongation factor Tu domain 2 D560_RS10485 PF00679 Elongation factor G C-terminus D560_RS10490 PF10502 Signal peptidase, peptidase S26 D560_RS10495 PF00035 Double-stranded RNA binding motif D560_RS10495 PF14622 Ribonuclease-III-like D560_RS10500 PF07650 KH domain D560_RS10500 PF01926 50S ribosome-binding GTPase D560_RS10505 PF02565 Recombination protein O C terminal D560_RS10505 PF11967 Recombination protein O N terminal D560_RS10510 PF00072 Response regulator receiver domain D560_RS10510 PF00990 Diguanylate cyclase, GGDEF domain D560_RS10515 PF01610 Transposase D560_RS10515 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10515 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10520 PF01027 Inhibitor of apoptosis-promoting Bax1 D560_RS10535 PF00883 Cytosol aminopeptidase family, catalytic domain D560_RS10535 PF02789 Cytosol aminopeptidase family, N-terminal domain D560_RS10555 PF00171 Aldehyde dehydrogenase family D560_RS10560 PF03466 LysR substrate binding domain D560_RS10560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS10565 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10565 PF01610 Transposase D560_RS10565 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10575 PF00877 NlpC/P60 family D560_RS10580 PF13193 AMP-binding enzyme C-terminal domain D560_RS10580 PF00501 AMP-binding enzyme D560_RS10580 PF16177 Acetyl-coenzyme A synthetase N-terminus D560_RS10585 PF03928 Haem-degrading D560_RS10595 PF16177 Acetyl-coenzyme A synthetase N-terminus D560_RS10595 PF13193 AMP-binding enzyme C-terminal domain D560_RS10595 PF00501 AMP-binding enzyme D560_RS10600 PF01610 Transposase D560_RS10600 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10600 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10610 PF01212 Beta-eliminating lyase D560_RS10630 PF01144 Coenzyme A transferase D560_RS10635 PF01144 Coenzyme A transferase D560_RS10645 PF01112 Asparaginase D560_RS10650 PF00005 ABC transporter D560_RS10650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS10655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D560_RS10660 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS10665 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS10665 PF12911 N-terminal TM domain of oligopeptide transport permease C D560_RS10670 PF03576 Peptidase family S58 D560_RS10685 PF00117 Glutamine amidotransferase class-I D560_RS10685 PF06418 CTP synthase N-terminus D560_RS10695 PF03952 Enolase, N-terminal domain D560_RS10695 PF00113 Enolase, C-terminal TIM barrel domain D560_RS10700 PF04977 Septum formation initiator D560_RS10710 PF01430 Hsp33 protein D560_RS10715 PF00132 Bacterial transferase hexapeptide (six repeats) D560_RS10725 PF00149 Calcineurin-like phosphoesterase D560_RS10735 PF01610 Transposase D560_RS10735 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10735 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10740 PF13276 HTH-like domain D560_RS10740 PF13683 Integrase core domain D560_RS10745 PF01527 Transposase D560_RS10750 PF01610 Transposase D560_RS10750 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10750 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10760 PF02926 THUMP domain D560_RS10760 PF01170 Putative RNA methylase family UPF0020 D560_RS10770 PF03972 MmgE/PrpD family D560_RS10775 PF00285 Citrate synthase, C-terminal domain D560_RS10785 PF00056 lactate/malate dehydrogenase, NAD binding domain D560_RS10785 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D560_RS10790 PF07702 UTRA domain D560_RS10790 PF00392 Bacterial regulatory proteins, gntR family D560_RS10795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D560_RS10800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D560_RS10805 PF00890 FAD binding domain D560_RS10805 PF02910 Fumarate reductase flavoprotein C-term D560_RS10810 PF13085 2Fe-2S iron-sulfur cluster binding domain D560_RS10815 PF03937 Flavinator of succinate dehydrogenase D560_RS10820 PF00285 Citrate synthase, C-terminal domain D560_RS10825 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10825 PF01610 Transposase D560_RS10825 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS10830 PF03466 LysR substrate binding domain D560_RS10835 PF08402 TOBE domain D560_RS10835 PF00005 ABC transporter D560_RS10845 PF13419 Haloacid dehalogenase-like hydrolase D560_RS10850 PF13419 Haloacid dehalogenase-like hydrolase D560_RS10860 PF01266 FAD dependent oxidoreductase D560_RS10870 PF18331 PKHD-type hydroxylase C-terminal domain D560_RS10870 PF13640 2OG-Fe(II) oxygenase superfamily D560_RS10880 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS10880 PF01610 Transposase D560_RS10880 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS10890 PF17831 Pyruvate dehydrogenase E1 component middle domain D560_RS10890 PF00456 Transketolase, thiamine diphosphate binding domain D560_RS10905 PF02817 e3 binding domain D560_RS10905 PF00364 Biotin-requiring enzyme D560_RS10905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D560_RS10915 PF03969 AFG1-like ATPase D560_RS10920 PF04542 Sigma-70 region 2 D560_RS10920 PF08281 Sigma-70, region 4 D560_RS10930 PF00593 TonB dependent receptor D560_RS10930 PF07715 TonB-dependent Receptor Plug Domain D560_RS10950 PF00579 tRNA synthetases class I (W and Y) D560_RS10955 PF00575 S1 RNA binding domain D560_RS10955 PF16921 Tex protein YqgF-like domain D560_RS10955 PF17674 HHH domain D560_RS10955 PF09371 Tex-like protein N-terminal domain D560_RS10960 PF13307 Helicase C-terminal domain D560_RS10960 PF04851 Type III restriction enzyme, res subunit D560_RS10965 PF13525 Outer membrane lipoprotein D560_RS10970 PF01479 S4 domain D560_RS10970 PF00849 RNA pseudouridylate synthase D560_RS10985 PF00106 short chain dehydrogenase D560_RS10990 PF07879 PHB/PHA accumulation regulator DNA-binding domain D560_RS10990 PF05233 PHB accumulation regulatory domain D560_RS10995 PF10634 Fe2+ transport protein D560_RS11015 PF02567 Phenazine biosynthesis-like protein D560_RS11020 PF04972 BON domain D560_RS11025 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11025 PF01610 Transposase D560_RS11025 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11035 PF05532 CsbD-like D560_RS11040 PF01292 Prokaryotic cytochrome b561 D560_RS11055 PF00664 ABC transporter transmembrane region D560_RS11055 PF00005 ABC transporter D560_RS11070 PF04305 Protein of unknown function (DUF455) D560_RS11075 PF13406 Transglycosylase SLT domain D560_RS11085 PF00072 Response regulator receiver domain D560_RS11085 PF00990 Diguanylate cyclase, GGDEF domain D560_RS11105 PF00171 Aldehyde dehydrogenase family D560_RS11125 PF01610 Transposase D560_RS11125 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11125 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11130 PF01527 Transposase D560_RS11135 PF13276 HTH-like domain D560_RS11135 PF13683 Integrase core domain D560_RS11140 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11140 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11140 PF01610 Transposase D560_RS11145 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS11150 PF14698 Argininosuccinate lyase C-terminal D560_RS11150 PF00206 Lyase D560_RS11155 PF03466 LysR substrate binding domain D560_RS11155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS11160 PF07690 Major Facilitator Superfamily D560_RS11165 PF13419 Haloacid dehalogenase-like hydrolase D560_RS11175 PF00691 OmpA family D560_RS11180 PF03989 DNA gyrase C-terminal domain, beta-propeller D560_RS11180 PF00521 DNA gyrase/topoisomerase IV, subunit A D560_RS11185 PF00266 Aminotransferase class-V D560_RS11190 PF01842 ACT domain D560_RS11190 PF01817 Chorismate mutase type II D560_RS11190 PF00800 Prephenate dehydratase D560_RS11195 PF00155 Aminotransferase class I and II D560_RS11210 PF02224 Cytidylate kinase D560_RS11215 PF00575 S1 RNA binding domain D560_RS11220 PF00216 Bacterial DNA-binding protein D560_RS11230 PF18073 Rubredoxin metal binding domain D560_RS11240 PF01370 NAD dependent epimerase/dehydratase family D560_RS11245 PF00291 Pyridoxal-phosphate dependent enzyme D560_RS11250 PF13406 Transglycosylase SLT domain D560_RS11255 PF00850 Histone deacetylase domain D560_RS11260 PF01012 Electron transfer flavoprotein domain D560_RS11265 PF00766 Electron transfer flavoprotein FAD-binding domain D560_RS11265 PF01012 Electron transfer flavoprotein domain D560_RS11270 PF06826 Predicted Permease Membrane Region D560_RS11270 PF02080 TrkA-C domain D560_RS11275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS11275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS11275 PF12806 Acetyl-CoA dehydrogenase C-terminal like D560_RS11275 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS11280 PF10417 C-terminal domain of 1-Cys peroxiredoxin D560_RS11280 PF00578 AhpC/TSA family D560_RS11290 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS11295 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS11300 PF00005 ABC transporter D560_RS11300 PF17850 CysA C-terminal regulatory domain D560_RS11300 PF12857 TOBE-like domain D560_RS11305 PF01507 Phosphoadenosine phosphosulfate reductase family D560_RS11310 PF01507 Phosphoadenosine phosphosulfate reductase family D560_RS11315 PF00009 Elongation factor Tu GTP binding domain D560_RS11320 PF04055 Radical SAM superfamily D560_RS11330 PF01245 Ribosomal protein L19 D560_RS11335 PF01610 Transposase D560_RS11335 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11335 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11340 PF00293 NUDIX domain D560_RS11345 PF01261 Xylose isomerase-like TIM barrel D560_RS11350 PF03193 RsgA GTPase D560_RS11355 PF01435 Peptidase family M48 D560_RS11360 PF00929 Exonuclease D560_RS11365 PF03853 YjeF-related protein N-terminus D560_RS11370 PF07848 PaaX-like protein D560_RS11370 PF08223 PaaX-like protein C-terminal domain D560_RS11375 PF05138 Phenylacetic acid catabolic protein D560_RS11380 PF06243 Phenylacetic acid degradation B D560_RS11385 PF05138 Phenylacetic acid catabolic protein D560_RS11390 PF01883 Iron-sulfur cluster assembly protein D560_RS11395 PF00175 Oxidoreductase NAD-binding domain D560_RS11395 PF00111 2Fe-2S iron-sulfur cluster binding domain D560_RS11395 PF00970 Oxidoreductase FAD-binding domain D560_RS11400 PF00171 Aldehyde dehydrogenase family D560_RS11405 PF00378 Enoyl-CoA hydratase/isomerase D560_RS11410 PF03061 Thioesterase superfamily D560_RS11415 PF01610 Transposase D560_RS11415 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11415 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D560_RS11440 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D560_RS11450 PF03480 Bacterial extracellular solute-binding protein, family 7 D560_RS11460 PF01152 Bacterial-like globin D560_RS11470 PF13416 Bacterial extracellular solute-binding protein D560_RS11475 PF00005 ABC transporter D560_RS11475 PF08402 TOBE domain D560_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS11505 PF02646 RmuC family D560_RS11515 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D560_RS11520 PF01895 PhoU domain D560_RS11525 PF04362 Bacterial Fe(2+) trafficking D560_RS11530 PF00696 Amino acid kinase family D560_RS11530 PF00583 Acetyltransferase (GNAT) family D560_RS11535 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D560_RS11535 PF00270 DEAD/DEAH box helicase D560_RS11535 PF11898 Domain of unknown function (DUF3418) D560_RS11535 PF04408 Helicase associated domain (HA2) D560_RS11535 PF00271 Helicase conserved C-terminal domain D560_RS11545 PF01336 OB-fold nucleic acid binding domain D560_RS11545 PF07733 Bacterial DNA polymerase III alpha NTPase domain D560_RS11545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D560_RS11545 PF14579 Helix-hairpin-helix motif D560_RS11545 PF02811 PHP domain D560_RS11550 PF00534 Glycosyl transferases group 1 D560_RS11555 PF01522 Polysaccharide deacetylase D560_RS11560 PF00535 Glycosyl transferase family 2 D560_RS11590 PF00664 ABC transporter transmembrane region D560_RS11590 PF00005 ABC transporter D560_RS11595 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11595 PF01610 Transposase D560_RS11595 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11610 PF08240 Alcohol dehydrogenase GroES-like domain D560_RS11610 PF00107 Zinc-binding dehydrogenase D560_RS11615 PF01435 Peptidase family M48 D560_RS11625 PF00581 Rhodanese-like domain D560_RS11630 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11630 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11630 PF01610 Transposase D560_RS11650 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS11660 PF02609 Exonuclease VII small subunit D560_RS11665 PF00348 Polyprenyl synthetase D560_RS11675 PF02649 Type I GTP cyclohydrolase folE2 D560_RS11680 PF01250 Ribosomal protein S6 D560_RS11690 PF01084 Ribosomal protein S18 D560_RS11695 PF01281 Ribosomal protein L9, N-terminal domain D560_RS11695 PF03948 Ribosomal protein L9, C-terminal domain D560_RS11705 PF03796 DnaB-like helicase C terminal domain D560_RS11705 PF00772 DnaB-like helicase N terminal domain D560_RS11715 PF13593 SBF-like CPA transporter family (DUF4137) D560_RS11720 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D560_RS11725 PF13638 PIN domain D560_RS11725 PF02562 PhoH-like protein D560_RS11730 PF00578 AhpC/TSA family D560_RS11735 PF04430 Protein of unknown function (DUF498/DUF598) D560_RS11740 PF00155 Aminotransferase class I and II D560_RS11745 PF03447 Homoserine dehydrogenase, NAD binding domain D560_RS11745 PF00742 Homoserine dehydrogenase D560_RS11745 PF01842 ACT domain D560_RS11750 PF00291 Pyridoxal-phosphate dependent enzyme D560_RS11750 PF14821 Threonine synthase N terminus D560_RS11755 PF01527 Transposase D560_RS11760 PF13683 Integrase core domain D560_RS11760 PF13276 HTH-like domain D560_RS11765 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D560_RS11770 PF01433 Peptidase family M1 domain D560_RS11770 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D560_RS11770 PF11940 Domain of unknown function (DUF3458) Ig-like fold D560_RS11780 PF00816 H-NS histone family D560_RS11785 PF01523 Putative modulator of DNA gyrase D560_RS11790 PF00793 DAHP synthetase I family D560_RS11795 PF01610 Transposase D560_RS11795 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11795 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11805 PF13276 HTH-like domain D560_RS11805 PF13683 Integrase core domain D560_RS11810 PF01527 Transposase D560_RS11820 PF01565 FAD binding domain D560_RS11825 PF13183 4Fe-4S dicluster domain D560_RS11825 PF02754 Cysteine-rich domain D560_RS11830 PF02233 NAD(P) transhydrogenase beta subunit D560_RS11835 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D560_RS11845 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS11845 PF01610 Transposase D560_RS11845 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS11855 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS11860 PF03466 LysR substrate binding domain D560_RS11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS11870 PF01925 Sulfite exporter TauE/SafE D560_RS11875 PF13417 Glutathione S-transferase, N-terminal domain D560_RS11875 PF00043 Glutathione S-transferase, C-terminal domain D560_RS11880 PF00206 Lyase D560_RS11880 PF08328 Adenylosuccinate lyase C-terminal D560_RS11885 PF01322 Cytochrome C' D560_RS11895 PF13276 HTH-like domain D560_RS11895 PF13683 Integrase core domain D560_RS11910 PF01594 AI-2E family transporter D560_RS11920 PF00990 Diguanylate cyclase, GGDEF domain D560_RS11930 PF13683 Integrase core domain D560_RS11930 PF13276 HTH-like domain D560_RS11935 PF13936 Helix-turn-helix domain D560_RS11935 PF00665 Integrase core domain D560_RS11955 PF10017 Histidine-specific methyltransferase, SAM-dependent D560_RS11980 PF01645 Conserved region in glutamate synthase D560_RS11985 PF04143 Sulphur transport D560_RS11990 PF02040 Arsenical pump membrane protein D560_RS12000 PF13673 Acetyltransferase (GNAT) domain D560_RS12020 PF08461 Ribonuclease R winged-helix domain D560_RS12020 PF17876 Cold shock domain D560_RS12020 PF00575 S1 RNA binding domain D560_RS12020 PF08206 Ribonuclease B OB domain D560_RS12020 PF00773 RNB domain D560_RS12025 PF00588 SpoU rRNA Methylase family D560_RS12025 PF08032 RNA 2'-O ribose methyltransferase substrate binding D560_RS12030 PF01053 Cys/Met metabolism PLP-dependent enzyme D560_RS12035 PF00216 Bacterial DNA-binding protein D560_RS12050 PF01618 MotA/TolQ/ExbB proton channel family D560_RS12055 PF02472 Biopolymer transport protein ExbD/TolR D560_RS12060 PF00486 Transcriptional regulatory protein, C terminal D560_RS12060 PF00072 Response regulator receiver domain D560_RS12065 PF00512 His Kinase A (phospho-acceptor) domain D560_RS12065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS12065 PF08521 Two-component sensor kinase N-terminal D560_RS12070 PF02705 K+ potassium transporter D560_RS12085 PF13683 Integrase core domain D560_RS12085 PF13276 HTH-like domain D560_RS12090 PF00764 Arginosuccinate synthase D560_RS12095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D560_RS12095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D560_RS12100 PF00202 Aminotransferase class-III D560_RS12110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D560_RS12110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D560_RS12125 PF00392 Bacterial regulatory proteins, gntR family D560_RS12125 PF07729 FCD domain D560_RS12130 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS12130 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS12130 PF01610 Transposase D560_RS12145 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS12150 PF03328 HpcH/HpaI aldolase/citrate lyase family D560_RS12155 PF01649 Ribosomal protein S20 D560_RS12175 PF13276 HTH-like domain D560_RS12175 PF13683 Integrase core domain D560_RS12180 PF13276 HTH-like domain D560_RS12180 PF13683 Integrase core domain D560_RS12185 PF01527 Transposase D560_RS12190 PF01610 Transposase D560_RS12190 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS12190 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS12195 PF00034 Cytochrome c D560_RS12200 PF05199 GMC oxidoreductase D560_RS12200 PF00732 GMC oxidoreductase D560_RS12210 PF03023 Lipid II flippase MurJ D560_RS12215 PF00106 short chain dehydrogenase D560_RS12220 PF05191 Adenylate kinase, active site lid D560_RS12225 PF02348 Cytidylyltransferase D560_RS12230 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D560_RS12235 PF02472 Biopolymer transport protein ExbD/TolR D560_RS12240 PF01618 MotA/TolQ/ExbB proton channel family D560_RS12245 PF13742 OB-fold nucleic acid binding domain D560_RS12245 PF02601 Exonuclease VII, large subunit D560_RS12250 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D560_RS12250 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D560_RS12255 PF13276 HTH-like domain D560_RS12255 PF13683 Integrase core domain D560_RS12260 PF00654 Voltage gated chloride channel D560_RS12265 PF02803 Thiolase, C-terminal domain D560_RS12265 PF00108 Thiolase, N-terminal domain D560_RS12275 PF00313 'Cold-shock' DNA-binding domain D560_RS12280 PF02617 ATP-dependent Clp protease adaptor protein ClpS D560_RS12310 PF02470 MlaD protein D560_RS12320 PF01619 Proline dehydrogenase D560_RS12320 PF00171 Aldehyde dehydrogenase family D560_RS12320 PF14850 DNA-binding domain of Proline dehydrogenase D560_RS12320 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D560_RS12325 PF13458 Periplasmic binding protein D560_RS12330 PF02653 Branched-chain amino acid transport system / permease component D560_RS12335 PF11862 Domain of unknown function (DUF3382) D560_RS12335 PF02653 Branched-chain amino acid transport system / permease component D560_RS12340 PF00005 ABC transporter D560_RS12340 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS12345 PF00005 ABC transporter D560_RS12355 PF00909 Ammonium Transporter Family D560_RS12360 PF00543 Nitrogen regulatory protein P-II D560_RS12375 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS12375 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS12375 PF01610 Transposase D560_RS12380 PF01610 Transposase D560_RS12380 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS12380 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS12385 PF04380 Membrane fusogenic activity D560_RS12395 PF01632 Ribosomal protein L35 D560_RS12400 PF00453 Ribosomal protein L20 D560_RS12405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D560_RS12405 PF01409 tRNA synthetases class II core domain (F) D560_RS12415 PF00216 Bacterial DNA-binding protein D560_RS12440 PF07729 FCD domain D560_RS12440 PF00392 Bacterial regulatory proteins, gntR family D560_RS12445 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS12450 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS12455 PF00180 Isocitrate/isopropylmalate dehydrogenase D560_RS12465 PF00313 'Cold-shock' DNA-binding domain D560_RS12495 PF01037 Lrp/AsnC ligand binding domain D560_RS12545 PF00664 ABC transporter transmembrane region D560_RS12545 PF00005 ABC transporter D560_RS12550 PF00248 Aldo/keto reductase family D560_RS12555 PF01527 Transposase D560_RS12560 PF13276 HTH-like domain D560_RS12560 PF13683 Integrase core domain D560_RS12565 PF00248 Aldo/keto reductase family D560_RS12570 PF00248 Aldo/keto reductase family D560_RS12585 PF00149 Calcineurin-like phosphoesterase D560_RS12590 PF17092 Penicillin-binding protein OB-like domain D560_RS12590 PF00912 Transglycosylase D560_RS12590 PF00905 Penicillin binding protein transpeptidase domain D560_RS12595 PF00326 Prolyl oligopeptidase family D560_RS12610 PF01610 Transposase D560_RS12610 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS12610 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS12620 PF09424 Yqey-like protein D560_RS12625 PF00175 Oxidoreductase NAD-binding domain D560_RS12625 PF00970 Oxidoreductase FAD-binding domain D560_RS12625 PF00042 Globin D560_RS12630 PF02082 Transcriptional regulator D560_RS12635 PF01266 FAD dependent oxidoreductase D560_RS12640 PF05853 beta-keto acid cleavage enzyme D560_RS12645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D560_RS12645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D560_RS12650 PF01610 Transposase D560_RS12650 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS12650 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS12655 PF13193 AMP-binding enzyme C-terminal domain D560_RS12655 PF00501 AMP-binding enzyme D560_RS12670 PF02803 Thiolase, C-terminal domain D560_RS12670 PF00108 Thiolase, N-terminal domain D560_RS12675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D560_RS12675 PF00378 Enoyl-CoA hydratase/isomerase D560_RS12675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D560_RS12680 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D560_RS12685 PF00378 Enoyl-CoA hydratase/isomerase D560_RS12685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D560_RS12685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D560_RS12690 PF00108 Thiolase, N-terminal domain D560_RS12690 PF02803 Thiolase, C-terminal domain D560_RS12695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS12695 PF09317 Domain of unknown function (DUF1974) D560_RS12695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS12705 PF00132 Bacterial transferase hexapeptide (six repeats) D560_RS12715 PF02146 Sir2 family D560_RS12720 PF00459 Inositol monophosphatase family D560_RS12725 PF00171 Aldehyde dehydrogenase family D560_RS12730 PF00202 Aminotransferase class-III D560_RS12750 PF01544 CorA-like Mg2+ transporter protein D560_RS12760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D560_RS12765 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS12770 PF12911 N-terminal TM domain of oligopeptide transport permease C D560_RS12770 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS12775 PF00005 ABC transporter D560_RS12775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS12795 PF04172 LrgB-like family D560_RS12810 PF00210 Ferritin-like domain D560_RS12830 PF00072 Response regulator receiver domain D560_RS12835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D560_RS12835 PF06481 COX Aromatic Rich Motif D560_RS12840 PF00115 Cytochrome C and Quinol oxidase polypeptide I D560_RS12845 PF00510 Cytochrome c oxidase subunit III D560_RS12850 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D560_RS12855 PF02678 Pirin D560_RS12855 PF05726 Pirin C-terminal cupin domain D560_RS12860 PF01527 Transposase D560_RS12865 PF13276 HTH-like domain D560_RS12865 PF13683 Integrase core domain D560_RS12870 PF13276 HTH-like domain D560_RS12870 PF13683 Integrase core domain D560_RS12875 PF02678 Pirin D560_RS12875 PF05726 Pirin C-terminal cupin domain D560_RS12885 PF13426 PAS domain D560_RS12885 PF08447 PAS fold D560_RS12885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D560_RS12900 PF04461 Protein of unknown function (DUF520) D560_RS12905 PF01425 Amidase D560_RS12915 PF08281 Sigma-70, region 4 D560_RS12915 PF04542 Sigma-70 region 2 D560_RS12930 PF00892 EamA-like transporter family D560_RS12935 PF00582 Universal stress protein family D560_RS12965 PF02634 FdhD/NarQ family D560_RS12990 PF06463 Molybdenum Cofactor Synthesis C D560_RS12990 PF04055 Radical SAM superfamily D560_RS12995 PF12804 MobA-like NTP transferase domain D560_RS13000 PF00994 Probable molybdopterin binding domain D560_RS13000 PF03454 MoeA C-terminal region (domain IV) D560_RS13000 PF03453 MoeA N-terminal region (domain I and II) D560_RS13005 PF00994 Probable molybdopterin binding domain D560_RS13010 PF02391 MoaE protein D560_RS13020 PF01967 MoaC family D560_RS13025 PF01738 Dienelactone hydrolase family D560_RS13035 PF08534 Redoxin D560_RS13050 PF13545 Crp-like helix-turn-helix domain D560_RS13050 PF00027 Cyclic nucleotide-binding domain D560_RS13065 PF00175 Oxidoreductase NAD-binding domain D560_RS13065 PF00258 Flavodoxin D560_RS13065 PF00667 FAD binding domain D560_RS13070 PF02424 ApbE family D560_RS13095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D560_RS13100 PF01593 Flavin containing amine oxidoreductase D560_RS13100 PF01593 Flavin containing amine oxidoreductase D560_RS13130 PF18073 Rubredoxin metal binding domain D560_RS13145 PF01554 MatE D560_RS13155 PF01197 Ribosomal protein L31 D560_RS13160 PF03301 Tryptophan 2,3-dioxygenase D560_RS13165 PF04199 Putative cyclase D560_RS13170 PF04002 RadC-like JAB domain D560_RS13180 PF02401 LytB protein D560_RS13185 PF14497 Glutathione S-transferase, C-terminal domain D560_RS13185 PF02798 Glutathione S-transferase, N-terminal domain D560_RS13215 PF03466 LysR substrate binding domain D560_RS13215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS13225 PF04079 Segregation and condensation complex subunit ScpB D560_RS13230 PF00849 RNA pseudouridylate synthase D560_RS13230 PF01479 S4 domain D560_RS13235 PF17384 RimP C-terminal SH3 domain D560_RS13235 PF02576 RimP N-terminal domain D560_RS13240 PF13184 NusA-like KH domain D560_RS13240 PF08529 NusA N-terminal domain D560_RS13245 PF11987 Translation-initiation factor 2 D560_RS13245 PF08364 Bacterial translation initiation factor IF-2 associated region D560_RS13245 PF00009 Elongation factor Tu GTP binding domain D560_RS13245 PF04760 Translation initiation factor IF-2, N-terminal region D560_RS13250 PF02033 Ribosome-binding factor A D560_RS13255 PF00009 Elongation factor Tu GTP binding domain D560_RS13255 PF00679 Elongation factor G C-terminus D560_RS13255 PF03144 Elongation factor Tu domain 2 D560_RS13270 PF00392 Bacterial regulatory proteins, gntR family D560_RS13270 PF07729 FCD domain D560_RS13280 PF00378 Enoyl-CoA hydratase/isomerase D560_RS13290 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS13295 PF00080 Copper/zinc superoxide dismutase (SODC) D560_RS13300 PF00248 Aldo/keto reductase family D560_RS13315 PF00005 ABC transporter D560_RS13325 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS13335 PF03459 TOBE domain D560_RS13355 PF00529 HlyD membrane-fusion protein of T1SS D560_RS13355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D560_RS13360 PF00529 HlyD membrane-fusion protein of T1SS D560_RS13360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D560_RS13365 PF00873 AcrB/AcrD/AcrF family D560_RS13370 PF02321 Outer membrane efflux protein D560_RS13375 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D560_RS13380 PF01648 4'-phosphopantetheinyl transferase superfamily D560_RS13385 PF00933 Glycosyl hydrolase family 3 N terminal domain D560_RS13395 PF01066 CDP-alcohol phosphatidyltransferase D560_RS13405 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D560_RS13405 PF14489 QueF-like protein D560_RS13410 PF00463 Isocitrate lyase family D560_RS13415 PF01047 MarR family D560_RS13420 PF02566 OsmC-like protein D560_RS13425 PF00005 ABC transporter D560_RS13430 PF01061 ABC-2 type transporter D560_RS13435 PF01594 AI-2E family transporter D560_RS13440 PF03707 Bacterial signalling protein N terminal repeat D560_RS13440 PF00563 EAL domain D560_RS13440 PF00990 Diguanylate cyclase, GGDEF domain D560_RS13450 PF01958 Domain of unknown function DUF108 D560_RS13450 PF03447 Homoserine dehydrogenase, NAD binding domain D560_RS13455 PF03466 LysR substrate binding domain D560_RS13455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS13460 PF07690 Major Facilitator Superfamily D560_RS13490 PF12843 Putative quorum-sensing-regulated virulence factor D560_RS13505 PF00293 NUDIX domain D560_RS13520 PF06968 Biotin and Thiamin Synthesis associated domain D560_RS13520 PF04055 Radical SAM superfamily D560_RS13550 PF02562 PhoH-like protein D560_RS13555 PF02130 Uncharacterized protein family UPF0054 D560_RS13560 PF03471 Transporter associated domain D560_RS13560 PF00571 CBS domain D560_RS13565 PF00795 Carbon-nitrogen hydrolase D560_RS13570 PF00248 Aldo/keto reductase family D560_RS13590 PF07549 SecD/SecF GG Motif D560_RS13590 PF02355 Protein export membrane protein D560_RS13600 PF02699 Preprotein translocase subunit D560_RS13605 PF01702 Queuine tRNA-ribosyltransferase D560_RS13615 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D560_RS13635 PF05957 Bacterial protein of unknown function (DUF883) D560_RS13650 PF01610 Transposase D560_RS13650 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS13650 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS13655 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D560_RS13660 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D560_RS13660 PF01464 Transglycosylase SLT domain D560_RS13665 PF00155 Aminotransferase class I and II D560_RS13675 PF03949 Malic enzyme, NAD binding domain D560_RS13675 PF00390 Malic enzyme, N-terminal domain D560_RS13675 PF01515 Phosphate acetyl/butaryl transferase D560_RS13690 PF04452 RNA methyltransferase D560_RS13695 PF00456 Transketolase, thiamine diphosphate binding domain D560_RS13695 PF02780 Transketolase, C-terminal domain D560_RS13695 PF02779 Transketolase, pyrimidine binding domain D560_RS13700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D560_RS13700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D560_RS13705 PF00162 Phosphoglycerate kinase D560_RS13710 PF01740 STAS domain D560_RS13710 PF00916 Sulfate permease family D560_RS13725 PF00871 Acetokinase family D560_RS13730 PF01515 Phosphate acetyl/butaryl transferase D560_RS13740 PF02798 Glutathione S-transferase, N-terminal domain D560_RS13740 PF14834 Glutathione S-transferase, C-terminal domain D560_RS13755 PF00226 DnaJ domain D560_RS13755 PF01556 DnaJ C terminal domain D560_RS13775 PF01384 Phosphate transporter family D560_RS13780 PF00994 Probable molybdopterin binding domain D560_RS13790 PF01551 Peptidase family M23 D560_RS13790 PF08525 Opacity-associated protein A N-terminal motif D560_RS13790 PF01476 LysM domain D560_RS13800 PF01176 Translation initiation factor 1A / IF-1 D560_RS13820 PF01970 Tripartite tricarboxylate transporter TctA family D560_RS13825 PF13276 HTH-like domain D560_RS13825 PF13683 Integrase core domain D560_RS13830 PF13276 HTH-like domain D560_RS13830 PF13683 Integrase core domain D560_RS13835 PF01527 Transposase D560_RS13840 PF01970 Tripartite tricarboxylate transporter TctA family D560_RS13850 PF00583 Acetyltransferase (GNAT) family D560_RS13855 PF00375 Sodium:dicarboxylate symporter family D560_RS13860 PF01116 Fructose-bisphosphate aldolase class-II D560_RS13865 PF01259 SAICAR synthetase D560_RS13870 PF00731 AIR carboxylase D560_RS13875 PF02222 ATP-grasp domain D560_RS13875 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D560_RS13880 PF01300 Telomere recombination D560_RS13880 PF03481 Putative GTP-binding controlling metal-binding D560_RS13910 PF00596 Class II Aldolase and Adducin N-terminal domain D560_RS13915 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS13920 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS13920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS13920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS13925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D560_RS13925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D560_RS13925 PF00205 Thiamine pyrophosphate enzyme, central domain D560_RS13930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS13930 PF03466 LysR substrate binding domain D560_RS13935 PF00589 Phage integrase family D560_RS13935 PF02899 Phage integrase, N-terminal SAM-like domain D560_RS13940 PF04073 Aminoacyl-tRNA editing domain D560_RS13945 PF00768 D-alanyl-D-alanine carboxypeptidase D560_RS13955 PF00083 Sugar (and other) transporter D560_RS13965 PF00580 UvrD/REP helicase N-terminal domain D560_RS13965 PF12705 PD-(D/E)XK nuclease superfamily D560_RS13965 PF13361 UvrD-like helicase C-terminal domain D560_RS13970 PF12169 DNA polymerase III subunits gamma and tau domain III D560_RS13970 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D560_RS13970 PF12170 DNA polymerase III tau subunit V interacting with alpha D560_RS13975 PF02575 YbaB/EbfC DNA-binding family D560_RS13995 PF00005 ABC transporter D560_RS14000 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS14005 PF00923 Transaldolase/Fructose-6-phosphate aldolase D560_RS14010 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D560_RS14010 PF00117 Glutamine amidotransferase class-I D560_RS14030 PF00300 Histidine phosphatase superfamily (branch 1) D560_RS14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS14035 PF03466 LysR substrate binding domain D560_RS14045 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS14060 PF00860 Permease family D560_RS14065 PF01381 Helix-turn-helix D560_RS14070 PF01610 Transposase D560_RS14070 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS14070 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS14075 PF01272 Transcription elongation factor, GreA/GreB, C-term D560_RS14075 PF03449 Transcription elongation factor, N-terminal D560_RS14080 PF01985 CRS1 / YhbY (CRM) domain D560_RS14085 PF01728 FtsJ-like methyltransferase D560_RS14090 PF06480 FtsH Extracellular D560_RS14090 PF00004 ATPase family associated with various cellular activities (AAA) D560_RS14090 PF17862 AAA+ lid domain D560_RS14090 PF01434 Peptidase family M41 D560_RS14095 PF00809 Pterin binding enzyme D560_RS14100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D560_RS14100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D560_RS14100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D560_RS14100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D560_RS14115 PF13089 Polyphosphate kinase N-terminal domain D560_RS14115 PF17941 Polyphosphate kinase C-terminal domain 1 D560_RS14115 PF13090 Polyphosphate kinase C-terminal domain 2 D560_RS14115 PF02503 Polyphosphate kinase middle domain D560_RS14125 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS14130 PF00005 ABC transporter D560_RS14145 PF01527 Transposase D560_RS14150 PF13683 Integrase core domain D560_RS14150 PF13276 HTH-like domain D560_RS14155 PF01695 IstB-like ATP binding protein D560_RS14160 PF02796 Helix-turn-helix domain of resolvase D560_RS14160 PF00665 Integrase core domain D560_RS14165 PF01527 Transposase D560_RS14175 PF01527 Transposase D560_RS14180 PF13683 Integrase core domain D560_RS14180 PF13276 HTH-like domain D560_RS14200 PF00155 Aminotransferase class I and II D560_RS14200 PF00392 Bacterial regulatory proteins, gntR family D560_RS14235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D560_RS14235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D560_RS14240 PF04381 Putative exonuclease, RdgC D560_RS14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS14255 PF00512 His Kinase A (phospho-acceptor) domain D560_RS14260 PF00486 Transcriptional regulatory protein, C terminal D560_RS14260 PF00072 Response regulator receiver domain D560_RS14265 PF00154 recA bacterial DNA recombination protein D560_RS14280 PF08267 Cobalamin-independent synthase, N-terminal domain D560_RS14280 PF01717 Cobalamin-independent synthase, Catalytic domain D560_RS14285 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS14285 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS14285 PF01610 Transposase D560_RS14295 PF08442 ATP-grasp domain D560_RS14295 PF00549 CoA-ligase D560_RS14300 PF02629 CoA binding domain D560_RS14300 PF00549 CoA-ligase D560_RS14305 PF03741 Integral membrane protein TerC family D560_RS14310 PF03741 Integral membrane protein TerC family D560_RS14320 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D560_RS14320 PF03900 Porphobilinogen deaminase, C-terminal domain D560_RS14340 PF00719 Inorganic pyrophosphatase D560_RS14345 PF01557 Fumarylacetoacetate (FAA) hydrolase family D560_RS14360 PF02190 ATP-dependent protease La (LON) substrate-binding domain D560_RS14360 PF00004 ATPase family associated with various cellular activities (AAA) D560_RS14360 PF05362 Lon protease (S16) C-terminal proteolytic domain D560_RS14410 PF01527 Transposase D560_RS14415 PF13683 Integrase core domain D560_RS14415 PF13276 HTH-like domain D560_RS14420 PF00437 Type II/IV secretion system protein D560_RS14440 PF01636 Phosphotransferase enzyme family D560_RS14445 PF01207 Dihydrouridine synthase (Dus) D560_RS14455 PF03631 Virulence factor BrkB D560_RS14470 PF00072 Response regulator receiver domain D560_RS14470 PF00486 Transcriptional regulatory protein, C terminal D560_RS14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS14475 PF00672 HAMP domain D560_RS14475 PF00512 His Kinase A (phospho-acceptor) domain D560_RS14480 PF00990 Diguanylate cyclase, GGDEF domain D560_RS14480 PF03707 Bacterial signalling protein N terminal repeat D560_RS14480 PF00563 EAL domain D560_RS14485 PF01264 Chorismate synthase D560_RS14490 PF01435 Peptidase family M48 D560_RS14495 PF00196 Bacterial regulatory proteins, luxR family D560_RS14495 PF00072 Response regulator receiver domain D560_RS14500 PF13683 Integrase core domain D560_RS14500 PF13276 HTH-like domain D560_RS14505 PF01527 Transposase D560_RS14515 PF00330 Aconitase family (aconitate hydratase) D560_RS14520 PF00694 Aconitase C-terminal domain D560_RS14525 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS14525 PF01610 Transposase D560_RS14525 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS14530 PF00180 Isocitrate/isopropylmalate dehydrogenase D560_RS14535 PF01118 Semialdehyde dehydrogenase, NAD binding domain D560_RS14535 PF02774 Semialdehyde dehydrogenase, dimerisation domain D560_RS14565 PF13333 Integrase core domain D560_RS14565 PF13276 HTH-like domain D560_RS14565 PF00665 Integrase core domain D560_RS14570 PF01527 Transposase D560_RS14575 PF13276 HTH-like domain D560_RS14575 PF13683 Integrase core domain D560_RS14580 PF01527 Transposase D560_RS14595 PF04055 Radical SAM superfamily D560_RS14595 PF06969 HemN C-terminal domain D560_RS14600 PF00072 Response regulator receiver domain D560_RS14600 PF00196 Bacterial regulatory proteins, luxR family D560_RS14605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D560_RS14605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D560_RS14605 PF02824 TGS domain D560_RS14605 PF03129 Anticodon binding domain D560_RS14610 PF00707 Translation initiation factor IF-3, C-terminal domain D560_RS14610 PF05198 Translation initiation factor IF-3, N-terminal domain D560_RS14625 PF00381 PTS HPr component phosphorylation site D560_RS14630 PF02896 PEP-utilising enzyme, TIM barrel domain D560_RS14630 PF05524 PEP-utilising enzyme, N-terminal D560_RS14630 PF00391 PEP-utilising enzyme, mobile domain D560_RS14640 PF02566 OsmC-like protein D560_RS14655 PF00497 Bacterial extracellular solute-binding proteins, family 3 D560_RS14660 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS14665 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS14670 PF00005 ABC transporter D560_RS14675 PF00692 dUTPase D560_RS14700 PF03575 Peptidase family S51 D560_RS14705 PF01037 Lrp/AsnC ligand binding domain D560_RS14715 PF01527 Transposase D560_RS14720 PF13276 HTH-like domain D560_RS14720 PF13683 Integrase core domain D560_RS14725 PF13276 HTH-like domain D560_RS14725 PF13683 Integrase core domain D560_RS14730 PF04127 DNA / pantothenate metabolism flavoprotein D560_RS14730 PF02441 Flavoprotein D560_RS14735 PF01252 Signal peptidase (SPase) II D560_RS14740 PF06827 Zinc finger found in FPG and IleRS D560_RS14740 PF08264 Anticodon-binding domain of tRNA D560_RS14740 PF00133 tRNA synthetases class I (I, L, M and V) D560_RS14745 PF01687 Riboflavin kinase D560_RS14745 PF06574 FAD synthetase D560_RS14755 PF01029 NusB family D560_RS14755 PF01189 16S rRNA methyltransferase RsmB/F D560_RS14765 PF01527 Transposase D560_RS14770 PF13683 Integrase core domain D560_RS14770 PF13276 HTH-like domain D560_RS14785 PF07715 TonB-dependent Receptor Plug Domain D560_RS14790 PF00005 ABC transporter D560_RS14790 PF12848 ABC transporter D560_RS14795 PF05175 Methyltransferase small domain D560_RS14800 PF01546 Peptidase family M20/M25/M40 D560_RS14800 PF07687 Peptidase dimerisation domain D560_RS14805 PF00132 Bacterial transferase hexapeptide (six repeats) D560_RS14805 PF14602 Hexapeptide repeat of succinyl-transferase D560_RS14805 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D560_RS14810 PF00155 Aminotransferase class I and II D560_RS14830 PF01527 Transposase D560_RS14840 PF01527 Transposase D560_RS14845 PF01695 IstB-like ATP binding protein D560_RS14850 PF00665 Integrase core domain D560_RS14850 PF02796 Helix-turn-helix domain of resolvase D560_RS14855 PF13683 Integrase core domain D560_RS14855 PF13276 HTH-like domain D560_RS14870 PF01527 Transposase D560_RS14875 PF13683 Integrase core domain D560_RS14875 PF13276 HTH-like domain D560_RS14895 PF04185 Phosphoesterase family D560_RS14895 PF05506 Domain of unknown function (DUF756) D560_RS14900 PF07690 Major Facilitator Superfamily D560_RS14905 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS14905 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS14905 PF01610 Transposase D560_RS14925 PF00795 Carbon-nitrogen hydrolase D560_RS14930 PF04102 SlyX D560_RS14940 PF00583 Acetyltransferase (GNAT) family D560_RS14945 PF05698 Bacterial trigger factor protein (TF) C-terminus D560_RS14965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D560_RS14965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D560_RS14970 PF00563 EAL domain D560_RS14970 PF03707 Bacterial signalling protein N terminal repeat D560_RS14970 PF00990 Diguanylate cyclase, GGDEF domain D560_RS14975 PF01557 Fumarylacetoacetate (FAA) hydrolase family D560_RS14990 PF00444 Ribosomal protein L36 D560_RS14995 PF03466 LysR substrate binding domain D560_RS14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS15005 PF00005 ABC transporter D560_RS15010 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS15015 PF09084 NMT1/THI5 like D560_RS15025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D560_RS15025 PF07992 Pyridine nucleotide-disulphide oxidoreductase D560_RS15035 PF17831 Pyruvate dehydrogenase E1 component middle domain D560_RS15035 PF00456 Transketolase, thiamine diphosphate binding domain D560_RS15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS15040 PF00512 His Kinase A (phospho-acceptor) domain D560_RS15040 PF00989 PAS fold D560_RS15045 PF00196 Bacterial regulatory proteins, luxR family D560_RS15045 PF00072 Response regulator receiver domain D560_RS15050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D560_RS15050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D560_RS15055 PF01432 Peptidase family M3 D560_RS15070 PF02630 SCO1/SenC D560_RS15080 PF02321 Outer membrane efflux protein D560_RS15085 PF00873 AcrB/AcrD/AcrF family D560_RS15090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D560_RS15090 PF00529 HlyD membrane-fusion protein of T1SS D560_RS15095 PF03466 LysR substrate binding domain D560_RS15095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS15100 PF00849 RNA pseudouridylate synthase D560_RS15100 PF01479 S4 domain D560_RS15105 PF04345 Chorismate lyase D560_RS15110 PF07690 Major Facilitator Superfamily D560_RS15115 PF07152 YaeQ protein D560_RS15125 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS15125 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS15125 PF01610 Transposase D560_RS15130 PF13458 Periplasmic binding protein D560_RS15135 PF00005 ABC transporter D560_RS15140 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS15140 PF01610 Transposase D560_RS15140 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS15145 PF00005 ABC transporter D560_RS15145 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS15155 PF11862 Domain of unknown function (DUF3382) D560_RS15155 PF02653 Branched-chain amino acid transport system / permease component D560_RS15160 PF02653 Branched-chain amino acid transport system / permease component D560_RS15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS15165 PF03466 LysR substrate binding domain D560_RS15175 PF00291 Pyridoxal-phosphate dependent enzyme D560_RS15175 PF13291 ACT domain D560_RS15185 PF00291 Pyridoxal-phosphate dependent enzyme D560_RS15200 PF00312 Ribosomal protein S15 D560_RS15215 PF01066 CDP-alcohol phosphatidyltransferase D560_RS15220 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D560_RS15220 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D560_RS15225 PF10369 Small subunit of acetolactate synthase D560_RS15230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D560_RS15230 PF00205 Thiamine pyrophosphate enzyme, central domain D560_RS15230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D560_RS15255 PF03883 Peroxide stress protein YaaA D560_RS15265 PF00106 short chain dehydrogenase D560_RS15280 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D560_RS15290 PF04183 IucA / IucC family D560_RS15290 PF06276 Ferric iron reductase FhuF-like transporter D560_RS15315 PF07715 TonB-dependent Receptor Plug Domain D560_RS15315 PF00593 TonB dependent receptor D560_RS15315 PF07660 Secretin and TonB N terminus short domain D560_RS15320 PF01914 MarC family integral membrane protein D560_RS15330 PF13683 Integrase core domain D560_RS15330 PF13276 HTH-like domain D560_RS15335 PF13276 HTH-like domain D560_RS15335 PF13683 Integrase core domain D560_RS15340 PF01527 Transposase D560_RS15365 PF00593 TonB dependent receptor D560_RS15365 PF07715 TonB-dependent Receptor Plug Domain D560_RS15375 PF07715 TonB-dependent Receptor Plug Domain D560_RS15375 PF00593 TonB dependent receptor D560_RS15380 PF02308 MgtC family D560_RS15385 PF04286 Protein of unknown function (DUF445) D560_RS15395 PF08774 VRR-NUC domain D560_RS15395 PF18081 Fanconi anemia-associated nuclease SAP domain D560_RS15405 PF02735 Ku70/Ku80 beta-barrel domain D560_RS15410 PF13298 DNA polymerase Ligase (LigD) D560_RS15410 PF01068 ATP dependent DNA ligase domain D560_RS15410 PF04679 ATP dependent DNA ligase C terminal region D560_RS15415 PF00440 Bacterial regulatory proteins, tetR family D560_RS15420 PF02321 Outer membrane efflux protein D560_RS15420 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D560_RS15425 PF13533 Biotin-lipoyl like D560_RS15430 PF00005 ABC transporter D560_RS15445 PF00106 short chain dehydrogenase D560_RS15450 PF00582 Universal stress protein family D560_RS15455 PF07681 DoxX D560_RS15465 PF00578 AhpC/TSA family D560_RS15475 PF03960 ArsC family D560_RS15480 PF02515 CoA-transferase family III D560_RS15485 PF03441 FAD binding domain of DNA photolyase D560_RS15485 PF00875 DNA photolyase D560_RS15505 PF00255 Glutathione peroxidase D560_RS15520 PF10437 Bacterial lipoate protein ligase C-terminus D560_RS15520 PF03099 Biotin/lipoate A/B protein ligase family D560_RS15530 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D560_RS15530 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D560_RS15535 PF03737 Aldolase/RraA D560_RS15540 PF00491 Arginase family D560_RS15550 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS15555 PF00497 Bacterial extracellular solute-binding proteins, family 3 D560_RS15570 PF01026 TatD related DNase D560_RS15575 PF12169 DNA polymerase III subunits gamma and tau domain III D560_RS15575 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D560_RS15575 PF12170 DNA polymerase III tau subunit V interacting with alpha D560_RS15580 PF02223 Thymidylate kinase D560_RS15585 PF02618 YceG-like family D560_RS15590 PF01571 Aminomethyltransferase folate-binding domain D560_RS15595 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D560_RS15600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS15600 PF03466 LysR substrate binding domain D560_RS15605 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS15605 PF01610 Transposase D560_RS15605 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS15620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D560_RS15620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D560_RS15625 PF00378 Enoyl-CoA hydratase/isomerase D560_RS15630 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS15630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS15630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS15640 PF03658 RnfH family Ubiquitin D560_RS15650 PF01668 SmpB protein D560_RS15665 PF00990 Diguanylate cyclase, GGDEF domain D560_RS15675 PF01145 SPFH domain / Band 7 family D560_RS15685 PF00117 Glutamine amidotransferase class-I D560_RS15685 PF00958 GMP synthase C terminal domain D560_RS15690 PF02896 PEP-utilising enzyme, TIM barrel domain D560_RS15690 PF00391 PEP-utilising enzyme, mobile domain D560_RS15690 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D560_RS15695 PF03618 Kinase/pyrophosphorylase D560_RS15705 PF00588 SpoU rRNA Methylase family D560_RS15705 PF08032 RNA 2'-O ribose methyltransferase substrate binding D560_RS15710 PF01351 Ribonuclease HII D560_RS15715 PF02684 Lipid-A-disaccharide synthetase D560_RS15720 PF00132 Bacterial transferase hexapeptide (six repeats) D560_RS15720 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D560_RS15725 PF07977 FabA-like domain D560_RS15730 PF00132 Bacterial transferase hexapeptide (six repeats) D560_RS15730 PF14602 Hexapeptide repeat of succinyl-transferase D560_RS15730 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D560_RS15735 PF03938 Outer membrane protein (OmpH-like) D560_RS15740 PF01103 Surface antigen D560_RS15740 PF07244 Surface antigen variable number repeat D560_RS15750 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D560_RS15750 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D560_RS15750 PF13288 DXP reductoisomerase C-terminal domain D560_RS15760 PF01255 Putative undecaprenyl diphosphate synthase D560_RS15765 PF01765 Ribosome recycling factor D560_RS15770 PF00696 Amino acid kinase family D560_RS15775 PF00889 Elongation factor TS D560_RS15780 PF00318 Ribosomal protein S2 D560_RS15785 PF00557 Metallopeptidase family M24 D560_RS15790 PF01842 ACT domain D560_RS15790 PF01909 Nucleotidyltransferase domain D560_RS15790 PF01966 HD domain D560_RS15790 PF08335 GlnD PII-uridylyltransferase D560_RS15805 PF00156 Phosphoribosyl transferase domain D560_RS15810 PF02674 Colicin V production protein D560_RS15830 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS15835 PF02515 CoA-transferase family III D560_RS15840 PF02770 Acyl-CoA dehydrogenase, middle domain D560_RS15840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D560_RS15840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D560_RS15855 PF07195 Flagellar hook-associated protein 2 C-terminus D560_RS15855 PF02465 Flagellar hook-associated protein 2 N-terminus D560_RS15860 PF02561 Flagellar protein FliS D560_RS15865 PF05400 Flagellar protein FliT D560_RS15885 PF02049 Flagellar hook-basal body complex protein FliE D560_RS15890 PF01514 Secretory protein of YscJ/FliF family D560_RS15890 PF08345 Flagellar M-ring protein C-terminal D560_RS15895 PF01706 FliG C-terminal domain D560_RS15895 PF14842 FliG N-terminal domain D560_RS15895 PF14841 FliG middle domain D560_RS15900 PF02108 Flagellar assembly protein FliH D560_RS15920 PF03748 Flagellar basal body-associated protein FliL D560_RS15925 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D560_RS15925 PF02154 Flagellar motor switch protein FliM D560_RS15930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D560_RS15930 PF16973 Flagellar motor switch protein FliN N-terminal D560_RS15935 PF04347 Flagellar biosynthesis protein, FliO D560_RS15940 PF00813 FliP family D560_RS15945 PF01313 Bacterial export proteins, family 3 D560_RS15950 PF01311 Bacterial export proteins, family 1 D560_RS15955 PF00672 HAMP domain D560_RS15955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D560_RS15955 PF02203 Tar ligand binding domain homologue D560_RS15965 PF01618 MotA/TolQ/ExbB proton channel family D560_RS15970 PF05280 Flagellar transcriptional activator (FlhC) D560_RS15975 PF05247 Flagellar transcriptional activator (FlhD) D560_RS15980 PF04545 Sigma-70, region 4 D560_RS15980 PF04539 Sigma-70 region 3 D560_RS15980 PF04542 Sigma-70 region 2 D560_RS15990 PF13276 HTH-like domain D560_RS15990 PF13683 Integrase core domain D560_RS15995 PF13683 Integrase core domain D560_RS15995 PF13276 HTH-like domain D560_RS16000 PF01527 Transposase D560_RS16010 PF07715 TonB-dependent Receptor Plug Domain D560_RS16010 PF00593 TonB dependent receptor D560_RS16020 PF00990 Diguanylate cyclase, GGDEF domain D560_RS16020 PF13185 GAF domain D560_RS16030 PF02016 LD-carboxypeptidase N-terminal domain D560_RS16030 PF17676 LD-carboxypeptidase C-terminal domain D560_RS16035 PF03971 Monomeric isocitrate dehydrogenase D560_RS16050 PF00005 ABC transporter D560_RS16055 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS16060 PF00497 Bacterial extracellular solute-binding proteins, family 3 D560_RS16080 PF00892 EamA-like transporter family D560_RS16085 PF00005 ABC transporter D560_RS16090 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS16090 PF00005 ABC transporter D560_RS16100 PF13458 Periplasmic binding protein D560_RS16105 PF12792 CSS motif domain associated with EAL D560_RS16105 PF00563 EAL domain D560_RS16120 PF03471 Transporter associated domain D560_RS16120 PF03741 Integral membrane protein TerC family D560_RS16130 PF00196 Bacterial regulatory proteins, luxR family D560_RS16130 PF00072 Response regulator receiver domain D560_RS16135 PF00989 PAS fold D560_RS16135 PF01627 Hpt domain D560_RS16135 PF00512 His Kinase A (phospho-acceptor) domain D560_RS16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS16135 PF00497 Bacterial extracellular solute-binding proteins, family 3 D560_RS16135 PF00072 Response regulator receiver domain D560_RS16150 PF01527 Transposase D560_RS16155 PF13276 HTH-like domain D560_RS16155 PF13683 Integrase core domain D560_RS16160 PF00282 Pyridoxal-dependent decarboxylase conserved domain D560_RS16165 PF02080 TrkA-C domain D560_RS16165 PF06826 Predicted Permease Membrane Region D560_RS16170 PF04343 Protein of unknown function, DUF488 D560_RS16175 PF07729 FCD domain D560_RS16175 PF00392 Bacterial regulatory proteins, gntR family D560_RS16180 PF03480 Bacterial extracellular solute-binding protein, family 7 D560_RS16190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D560_RS16190 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D560_RS16220 PF02666 Phosphatidylserine decarboxylase D560_RS16225 PF01070 FMN-dependent dehydrogenase D560_RS16230 PF03180 NLPA lipoprotein D560_RS16235 PF13683 Integrase core domain D560_RS16235 PF13276 HTH-like domain D560_RS16240 PF01527 Transposase D560_RS16245 PF00892 EamA-like transporter family D560_RS16250 PF07995 Glucose / Sorbosone dehydrogenase D560_RS16255 PF00043 Glutathione S-transferase, C-terminal domain D560_RS16255 PF02798 Glutathione S-transferase, N-terminal domain D560_RS16260 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS16260 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS16260 PF01610 Transposase D560_RS16265 PF01177 Asp/Glu/Hydantoin racemase D560_RS16270 PF00005 ABC transporter D560_RS16275 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS16275 PF00005 ABC transporter D560_RS16280 PF02653 Branched-chain amino acid transport system / permease component D560_RS16280 PF11862 Domain of unknown function (DUF3382) D560_RS16285 PF02653 Branched-chain amino acid transport system / permease component D560_RS16290 PF13458 Periplasmic binding protein D560_RS16295 PF02592 Putative vitamin uptake transporter D560_RS16300 PF14748 Pyrroline-5-carboxylate reductase dimerisation D560_RS16300 PF03807 NADP oxidoreductase coenzyme F420-dependent D560_RS16305 PF13416 Bacterial extracellular solute-binding protein D560_RS16310 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS16315 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS16320 PF00005 ABC transporter D560_RS16320 PF17912 MalK OB fold domain D560_RS16325 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS16325 PF01610 Transposase D560_RS16325 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS16330 PF13458 Periplasmic binding protein D560_RS16355 PF00534 Glycosyl transferases group 1 D560_RS16365 PF00005 ABC transporter D560_RS16395 PF00210 Ferritin-like domain D560_RS16400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS16400 PF03466 LysR substrate binding domain D560_RS16405 PF00270 DEAD/DEAH box helicase D560_RS16405 PF17191 RecG wedge domain D560_RS16405 PF00271 Helicase conserved C-terminal domain D560_RS16410 PF01042 Endoribonuclease L-PSP D560_RS16420 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS16420 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS16420 PF01610 Transposase D560_RS16425 PF00970 Oxidoreductase FAD-binding domain D560_RS16425 PF00175 Oxidoreductase NAD-binding domain D560_RS16440 PF00005 ABC transporter D560_RS16440 PF08402 TOBE domain D560_RS16445 PF05726 Pirin C-terminal cupin domain D560_RS16445 PF02678 Pirin D560_RS16460 PF00072 Response regulator receiver domain D560_RS16460 PF00158 Sigma-54 interaction domain D560_RS16460 PF02954 Bacterial regulatory protein, Fis family D560_RS16465 PF00512 His Kinase A (phospho-acceptor) domain D560_RS16465 PF00989 PAS fold D560_RS16465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D560_RS16470 PF00120 Glutamine synthetase, catalytic domain D560_RS16470 PF03951 Glutamine synthetase, beta-Grasp domain D560_RS16475 PF04055 Radical SAM superfamily D560_RS16475 PF06969 HemN C-terminal domain D560_RS16480 PF01725 Ham1 family D560_RS16485 PF00563 EAL domain D560_RS16485 PF03707 Bacterial signalling protein N terminal repeat D560_RS16485 PF00990 Diguanylate cyclase, GGDEF domain D560_RS16490 PF00672 HAMP domain D560_RS16490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D560_RS16490 PF02203 Tar ligand binding domain homologue D560_RS16495 PF01610 Transposase D560_RS16495 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS16495 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS16500 PF03466 LysR substrate binding domain D560_RS16500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS16510 PF03972 MmgE/PrpD family D560_RS16520 PF03725 3' exoribonuclease family, domain 2 D560_RS16520 PF01138 3' exoribonuclease family, domain 1 D560_RS16525 PF03755 YicC-like family, N-terminal region D560_RS16525 PF08340 Domain of unknown function (DUF1732) D560_RS16535 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D560_RS16535 PF01048 Phosphorylase superfamily D560_RS16540 PF00877 NlpC/P60 family D560_RS16550 PF00625 Guanylate kinase D560_RS16555 PF01192 RNA polymerase Rpb6 D560_RS16560 PF13291 ACT domain D560_RS16560 PF04607 Region found in RelA / SpoT proteins D560_RS16560 PF02824 TGS domain D560_RS16565 PF00005 ABC transporter D560_RS16570 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS16575 PF00497 Bacterial extracellular solute-binding proteins, family 3 D560_RS16585 PF17287 POTRA domain D560_RS16585 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D560_RS16585 PF08479 POTRA domain, ShlB-type D560_RS16595 PF00577 Outer membrane usher protein D560_RS16595 PF13954 PapC N-terminal domain D560_RS16595 PF13953 PapC C-terminal domain D560_RS16600 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D560_RS16600 PF02753 Pili assembly chaperone PapD, C-terminal domain D560_RS16605 PF16970 Type-1 fimbrial protein, A D560_RS16610 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS16610 PF01610 Transposase D560_RS16610 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS16615 PF13018 Extended Signal Peptide of Type V secretion system D560_RS16615 PF05594 Haemagluttinin repeat D560_RS16615 PF05860 haemagglutination activity domain D560_RS16615 PF13332 Hemagglutinin repeat D560_RS16615 PF05860 haemagglutination activity domain D560_RS16615 PF13332 Hemagglutinin repeat D560_RS16615 PF05594 Haemagluttinin repeat D560_RS16615 PF13018 Extended Signal Peptide of Type V secretion system D560_RS16625 PF00005 ABC transporter D560_RS16635 PF13145 PPIC-type PPIASE domain D560_RS16640 PF03009 Glycerophosphoryl diester phosphodiesterase family D560_RS16645 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D560_RS16650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D560_RS16650 PF07992 Pyridine nucleotide-disulphide oxidoreductase D560_RS16655 PF00462 Glutaredoxin D560_RS16655 PF08534 Redoxin D560_RS16665 PF00403 Heavy-metal-associated domain D560_RS16670 PF00376 MerR family regulatory protein D560_RS16670 PF09278 MerR, DNA binding D560_RS16675 PF05958 tRNA (Uracil-5-)-methyltransferase D560_RS16680 PF01527 Transposase D560_RS16685 PF13683 Integrase core domain D560_RS16685 PF13276 HTH-like domain D560_RS16705 PF01551 Peptidase family M23 D560_RS16705 PF01476 LysM domain D560_RS16715 PF01975 Survival protein SurE D560_RS16720 PF02660 Glycerol-3-phosphate acyltransferase D560_RS16735 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS16740 PF04909 Amidohydrolase D560_RS16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS16745 PF03466 LysR substrate binding domain D560_RS16750 PF00814 Glycoprotease family D560_RS16755 PF00860 Permease family D560_RS16760 PF00296 Luciferase-like monooxygenase D560_RS16765 PF00085 Thioredoxin D560_RS16770 PF01205 Uncharacterized protein family UPF0029 D560_RS16795 PF00005 ABC transporter D560_RS16800 PF00005 ABC transporter D560_RS16800 PF12848 ABC transporter D560_RS16805 PF02016 LD-carboxypeptidase N-terminal domain D560_RS16805 PF17676 LD-carboxypeptidase C-terminal domain D560_RS16810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D560_RS16825 PF03334 Na+/H+ antiporter subunit D560_RS16830 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D560_RS16835 PF01899 Na+/H+ ion antiporter subunit D560_RS16840 PF00361 Proton-conducting membrane transporter D560_RS16845 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D560_RS16850 PF13244 Domain of unknown function (DUF4040) D560_RS16850 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D560_RS16850 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D560_RS16850 PF00361 Proton-conducting membrane transporter D560_RS16855 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS16875 PF12320 Type 5 capsule protein repressor C-terminal domain D560_RS16875 PF00149 Calcineurin-like phosphoesterase D560_RS16885 PF01037 Lrp/AsnC ligand binding domain D560_RS16900 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS16900 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS16900 PF01610 Transposase D560_RS16905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D560_RS16910 PF00455 DeoR C terminal sensor domain D560_RS16910 PF08220 DeoR-like helix-turn-helix domain D560_RS16915 PF01266 FAD dependent oxidoreductase D560_RS16915 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D560_RS16925 PF00107 Zinc-binding dehydrogenase D560_RS16925 PF16884 N-terminal domain of oxidoreductase D560_RS16930 PF00440 Bacterial regulatory proteins, tetR family D560_RS16930 PF08361 MAATS-type transcriptional repressor, C-terminal region D560_RS16940 PF00005 ABC transporter D560_RS16955 PF04073 Aminoacyl-tRNA editing domain D560_RS16985 PF00472 RF-1 domain D560_RS16995 PF01242 6-pyruvoyl tetrahydropterin synthase D560_RS17000 PF01070 FMN-dependent dehydrogenase D560_RS17005 PF01610 Transposase D560_RS17005 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS17005 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS17010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D560_RS17010 PF16591 Helical bimodular sensor domain D560_RS17010 PF00672 HAMP domain D560_RS17030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D560_RS17030 PF07733 Bacterial DNA polymerase III alpha NTPase domain D560_RS17030 PF02811 PHP domain D560_RS17030 PF14579 Helix-hairpin-helix motif D560_RS17045 PF00005 ABC transporter D560_RS17050 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain D560_RS17050 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain D560_RS17055 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS17055 PF01610 Transposase D560_RS17055 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS17060 PF07687 Peptidase dimerisation domain D560_RS17060 PF01546 Peptidase family M20/M25/M40 D560_RS17080 PF00155 Aminotransferase class I and II D560_RS17080 PF00392 Bacterial regulatory proteins, gntR family D560_RS17090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D560_RS17090 PF07992 Pyridine nucleotide-disulphide oxidoreductase D560_RS17100 PF00793 DAHP synthetase I family D560_RS17120 PF01965 DJ-1/PfpI family D560_RS17120 PF12833 Helix-turn-helix domain D560_RS17125 PF07237 Protein of unknown function (DUF1428) D560_RS17145 PF02535 ZIP Zinc transporter D560_RS17160 PF01381 Helix-turn-helix D560_RS17160 PF07883 Cupin domain D560_RS17170 PF01527 Transposase D560_RS17175 PF13276 HTH-like domain D560_RS17175 PF13683 Integrase core domain D560_RS17180 PF13276 HTH-like domain D560_RS17180 PF13683 Integrase core domain D560_RS17190 PF03466 LysR substrate binding domain D560_RS17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS17195 PF07690 Major Facilitator Superfamily D560_RS17210 PF00593 TonB dependent receptor D560_RS17210 PF07715 TonB-dependent Receptor Plug Domain D560_RS17215 PF12833 Helix-turn-helix domain D560_RS17225 PF02311 AraC-like ligand binding domain D560_RS17225 PF12833 Helix-turn-helix domain D560_RS17230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D560_RS17230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D560_RS17235 PF07690 Major Facilitator Superfamily D560_RS17245 PF00465 Iron-containing alcohol dehydrogenase D560_RS17255 PF00005 ABC transporter D560_RS17260 PF00005 ABC transporter D560_RS17260 PF12399 Branched-chain amino acid ATP-binding cassette transporter D560_RS17285 PF03466 LysR substrate binding domain D560_RS17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS17290 PF06029 AlkA N-terminal domain D560_RS17290 PF12833 Helix-turn-helix domain D560_RS17290 PF02805 Metal binding domain of Ada D560_RS17290 PF00730 HhH-GPD superfamily base excision DNA repair protein D560_RS17305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D560_RS17305 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D560_RS17330 PF02567 Phenazine biosynthesis-like protein D560_RS17335 PF01638 HxlR-like helix-turn-helix D560_RS17380 PF02540 NAD synthase D560_RS17380 PF00958 GMP synthase C terminal domain D560_RS17380 PF00117 Glutamine amidotransferase class-I D560_RS17385 PF00571 CBS domain D560_RS17385 PF00478 IMP dehydrogenase / GMP reductase domain D560_RS17395 PF03551 Transcriptional regulator PadR-like family D560_RS17400 PF08021 Siderophore-interacting FAD-binding domain D560_RS17400 PF04954 Siderophore-interacting protein D560_RS17405 PF03466 LysR substrate binding domain D560_RS17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS17410 PF13454 FAD-NAD(P)-binding D560_RS17415 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS17425 PF01527 Transposase D560_RS17430 PF13276 HTH-like domain D560_RS17430 PF13683 Integrase core domain D560_RS17435 PF12911 N-terminal TM domain of oligopeptide transport permease C D560_RS17435 PF00528 Binding-protein-dependent transport system inner membrane component D560_RS17445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D560_RS17445 PF00005 ABC transporter D560_RS17495 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D560_RS17500 PF13276 HTH-like domain D560_RS17500 PF13683 Integrase core domain D560_RS17505 PF01527 Transposase D560_RS17510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D560_RS17510 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D560_RS17515 PF03480 Bacterial extracellular solute-binding protein, family 7 D560_RS17520 PF03449 Transcription elongation factor, N-terminal D560_RS17520 PF01272 Transcription elongation factor, GreA/GreB, C-term D560_RS17525 PF02811 PHP domain D560_RS17540 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS17540 PF01610 Transposase D560_RS17540 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS17560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS17560 PF03466 LysR substrate binding domain D560_RS17565 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS17575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D560_RS17575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D560_RS17585 PF00171 Aldehyde dehydrogenase family D560_RS17610 PF02615 Malate/L-lactate dehydrogenase D560_RS17615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D560_RS17615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D560_RS17625 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS17630 PF01527 Transposase D560_RS17635 PF03401 Tripartite tricarboxylate transporter family receptor D560_RS17640 PF04909 Amidohydrolase D560_RS17650 PF02369 Bacterial Ig-like domain (group 1) D560_RS17650 PF11924 Inverse autotransporter, beta-domain D560_RS17650 PF07979 Intimin C-type lectin domain D560_RS17650 PF09134 Invasin, domain 3 D560_RS17665 PF04542 Sigma-70 region 2 D560_RS17665 PF08281 Sigma-70, region 4 D560_RS17670 PF04773 FecR protein D560_RS17670 PF16220 Domain of unknown function (DUF4880) D560_RS17675 PF07660 Secretin and TonB N terminus short domain D560_RS17675 PF07715 TonB-dependent Receptor Plug Domain D560_RS17675 PF00593 TonB dependent receptor D560_RS17680 PF01026 TatD related DNase D560_RS17685 PF00005 ABC transporter D560_RS17690 PF12704 MacB-like periplasmic core domain D560_RS17690 PF02687 FtsX-like permease family D560_RS17705 PF03462 PCRF domain D560_RS17705 PF00472 RF-1 domain D560_RS17710 PF00106 short chain dehydrogenase D560_RS17715 PF00152 tRNA synthetases class II (D, K and N) D560_RS17715 PF01336 OB-fold nucleic acid binding domain D560_RS17720 PF02142 MGS-like domain D560_RS17735 PF00593 TonB dependent receptor D560_RS17735 PF07660 Secretin and TonB N terminus short domain D560_RS17735 PF07715 TonB-dependent Receptor Plug Domain D560_RS17740 PF13683 Integrase core domain D560_RS17740 PF13276 HTH-like domain D560_RS17745 PF01695 IstB-like ATP binding protein D560_RS17750 PF00665 Integrase core domain D560_RS17750 PF02796 Helix-turn-helix domain of resolvase D560_RS17755 PF01527 Transposase D560_RS17760 PF00593 TonB dependent receptor D560_RS17760 PF07660 Secretin and TonB N terminus short domain D560_RS17760 PF07715 TonB-dependent Receptor Plug Domain D560_RS17765 PF04384 Iron-sulphur cluster assembly D560_RS17770 PF00111 2Fe-2S iron-sulfur cluster binding domain D560_RS17775 PF00012 Hsp70 protein D560_RS17780 PF07743 HSCB C-terminal oligomerisation domain D560_RS17785 PF01521 Iron-sulphur cluster biosynthesis D560_RS17790 PF01592 NifU-like N terminal domain D560_RS17795 PF00266 Aminotransferase class-V D560_RS17800 PF02082 Transcriptional regulator D560_RS17805 PF01451 Low molecular weight phosphotyrosine protein phosphatase D560_RS17810 PF17757 UvrB interaction domain D560_RS17810 PF12344 Ultra-violet resistance protein B D560_RS17810 PF04851 Type III restriction enzyme, res subunit D560_RS17810 PF02151 UvrB/uvrC motif D560_RS17810 PF00271 Helicase conserved C-terminal domain D560_RS17815 PF00155 Aminotransferase class I and II D560_RS17820 PF13333 Integrase core domain D560_RS17820 PF00665 Integrase core domain D560_RS17845 PF02627 Carboxymuconolactone decarboxylase family D560_RS17860 PF00107 Zinc-binding dehydrogenase D560_RS17860 PF08240 Alcohol dehydrogenase GroES-like domain D560_RS17865 PF13683 Integrase core domain D560_RS17865 PF13276 HTH-like domain D560_RS17870 PF00717 Peptidase S24-like D560_RS17870 PF01726 LexA DNA binding domain D560_RS17875 PF01610 Transposase D560_RS17875 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS17875 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS17880 PF00004 ATPase family associated with various cellular activities (AAA) D560_RS17880 PF05362 Lon protease (S16) C-terminal proteolytic domain D560_RS17880 PF02190 ATP-dependent protease La (LON) substrate-binding domain D560_RS17885 PF06689 ClpX C4-type zinc finger D560_RS17885 PF10431 C-terminal, D2-small domain, of ClpB protein D560_RS17885 PF07724 AAA domain (Cdc48 subfamily) D560_RS17895 PF05697 Bacterial trigger factor protein (TF) D560_RS17895 PF05698 Bacterial trigger factor protein (TF) C-terminus D560_RS17895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D560_RS17900 PF03350 Uncharacterized protein family, UPF0114 D560_RS17905 PF01610 Transposase D560_RS17905 PF13542 Helix-turn-helix domain of transposase family ISL3 D560_RS17905 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D560_RS17910 PF01527 Transposase D560_RS17915 PF02796 Helix-turn-helix domain of resolvase D560_RS17915 PF00665 Integrase core domain D560_RS17920 PF01695 IstB-like ATP binding protein D560_RS17925 PF13683 Integrase core domain D560_RS17925 PF13276 HTH-like domain D560_RS17935 PF00313 'Cold-shock' DNA-binding domain D560_RS17965 PF13007 Transposase C of IS166 homeodomain D560_RS17965 PF13817 IS66 C-terminal element D560_RS17965 PF13005 zinc-finger binding domain of transposase IS66 D560_RS17965 PF03050 Transposase IS66 family D560_RS17980 PF13683 Integrase core domain D560_RS17980 PF13276 HTH-like domain D560_RS17985 PF01527 Transposase D560_RS18030 PF03466 LysR substrate binding domain D560_RS18030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D560_RS18035 PF13533 Biotin-lipoyl like D560_RS18040 PF13533 Biotin-lipoyl like D560_RS18045 PF00563 EAL domain D560_RS18045 PF04940 Sensors of blue-light using FAD D560_RS18065 PF07715 TonB-dependent Receptor Plug Domain D560_RS18065 PF00593 TonB dependent receptor D560_RS18070 PF01527 Transposase D560_RS18085 PF00294 pfkB family carbohydrate kinase D560_RS18090 PF00294 pfkB family carbohydrate kinase D560_RS18095 PF01527 Transposase D560_RS18100 PF01527 Transposase D560_RS18105 PF01527 Transposase D560_RS18110 PF01527 Transposase D560_RS18130 PF12445 Flagellin protein D560_RS18130 PF00700 Bacterial flagellin C-terminal helical region D560_RS18130 PF00669 Bacterial flagellin N-terminal helical region D560_RS18150 PF00665 Integrase core domain D560_RS18150 PF13333 Integrase core domain D560_RS18150 PF13276 HTH-like domain D560_RS18155 PF01527 Transposase