D560_RS00145	PWY-6825	phosphatidylcholine biosynthesis V
D560_RS00285	PWY-2941	L-lysine biosynthesis II
D560_RS00285	PWY-2942	L-lysine biosynthesis III
D560_RS00285	PWY-5097	L-lysine biosynthesis VI
D560_RS00285	PWY-6559	spermidine biosynthesis II
D560_RS00285	PWY-6562	norspermidine biosynthesis
D560_RS00285	PWY-7153	grixazone biosynthesis
D560_RS00295	PWY-4381	fatty acid biosynthesis initiation I
D560_RS00295	PWY-5743	3-hydroxypropanoate cycle
D560_RS00295	PWY-5744	glyoxylate assimilation
D560_RS00295	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS00295	PWY-6679	jadomycin biosynthesis
D560_RS00295	PWY-6722	candicidin biosynthesis
D560_RS00295	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
D560_RS00325	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
D560_RS00335	PWY-2301	<i>myo</i>-inositol biosynthesis
D560_RS00335	PWY-4702	phytate degradation I
D560_RS00335	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
D560_RS00340	PWY-6004	glycine betaine biosynthesis V (from glycine)
D560_RS00400	PWY-5169	cyanurate degradation
D560_RS00400	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
D560_RS00465	PWY-2941	L-lysine biosynthesis II
D560_RS00465	PWY-2942	L-lysine biosynthesis III
D560_RS00465	PWY-5097	L-lysine biosynthesis VI
D560_RS00570	PWY-6803	phosphatidylcholine acyl editing
D560_RS00570	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
D560_RS00570	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
D560_RS00570	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
D560_RS00750	PWY-1042	glycolysis IV (plant cytosol)
D560_RS00750	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS00750	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS00750	PWY-7003	glycerol degradation to butanol
D560_RS00765	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
D560_RS00790	PWY-4983	L-citrulline-nitric oxide cycle
D560_RS00790	PWY-4984	urea cycle
D560_RS00790	PWY-5	canavanine biosynthesis
D560_RS00790	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS00790	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS00850	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
D560_RS00905	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
D560_RS00990	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS00990	PWY-6549	L-glutamine biosynthesis III
D560_RS00990	PWY-6728	methylaspartate cycle
D560_RS00990	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS00990	PWY-7124	ethylene biosynthesis V (engineered)
D560_RS00990	PWY-7254	TCA cycle VII (acetate-producers)
D560_RS00990	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
D560_RS01070	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
D560_RS01070	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
D560_RS01070	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
D560_RS01110	PWY-2941	L-lysine biosynthesis II
D560_RS01110	PWY-2942	L-lysine biosynthesis III
D560_RS01110	PWY-5097	L-lysine biosynthesis VI
D560_RS01115	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
D560_RS01115	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
D560_RS01260	PWY-5686	UMP biosynthesis
D560_RS01350	PWY-3801	sucrose degradation II (sucrose synthase)
D560_RS01350	PWY-6527	stachyose degradation
D560_RS01350	PWY-7238	sucrose biosynthesis II
D560_RS01350	PWY-7343	UDP-glucose biosynthesis
D560_RS01415	PWY-6123	inosine-5'-phosphate biosynthesis I
D560_RS01415	PWY-6124	inosine-5'-phosphate biosynthesis II
D560_RS01415	PWY-7234	inosine-5'-phosphate biosynthesis III
D560_RS01475	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
D560_RS01565	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
D560_RS01565	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
D560_RS01745	PWY-7039	phosphatidate metabolism, as a signaling molecule
D560_RS01755	PWY-5686	UMP biosynthesis
D560_RS01765	PWY-5269	cardiolipin biosynthesis II
D560_RS01765	PWY-5668	cardiolipin biosynthesis I
D560_RS01770	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
D560_RS01770	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
D560_RS01770	PWY-6896	thiamin salvage I
D560_RS01770	PWY-6897	thiamin salvage II
D560_RS01780	PWY-6167	flavin biosynthesis II (archaea)
D560_RS01780	PWY-6168	flavin biosynthesis III (fungi)
D560_RS01785	PWY-6167	flavin biosynthesis II (archaea)
D560_RS01785	PWY-6168	flavin biosynthesis III (fungi)
D560_RS01785	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
D560_RS01845	PWY-6825	phosphatidylcholine biosynthesis V
D560_RS01905	PWY-6871	3-methylbutanol biosynthesis
D560_RS02035	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
D560_RS02055	PWY-7560	methylerythritol phosphate pathway II
D560_RS02200	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
D560_RS02200	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
D560_RS02200	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
D560_RS02220	PWY-3841	folate transformations II
D560_RS02220	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS02220	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS02220	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
D560_RS02220	PWY-7199	pyrimidine deoxyribonucleosides salvage
D560_RS02220	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
D560_RS02225	PWY-3841	folate transformations II
D560_RS02225	PWY-6614	tetrahydrofolate biosynthesis
D560_RS02240	PWY-5642	2,4-dinitrotoluene degradation
D560_RS02240	PWY-6373	acrylate degradation
D560_RS02320	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS02375	PWY-31	canavanine degradation
D560_RS02375	PWY-4984	urea cycle
D560_RS02375	PWY-6305	putrescine biosynthesis IV
D560_RS02375	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
D560_RS02575	PWY-5392	reductive TCA cycle II
D560_RS02575	PWY-5537	pyruvate fermentation to acetate V
D560_RS02575	PWY-5538	pyruvate fermentation to acetate VI
D560_RS02575	PWY-5690	TCA cycle II (plants and fungi)
D560_RS02575	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS02575	PWY-6728	methylaspartate cycle
D560_RS02575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS02575	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
D560_RS02625	PWY-1361	benzoyl-CoA degradation I (aerobic)
D560_RS02625	PWY-5109	2-methylbutanoate biosynthesis
D560_RS02625	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
D560_RS02625	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
D560_RS02625	PWY-5177	glutaryl-CoA degradation
D560_RS02625	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS02625	PWY-6435	4-hydroxybenzoate biosynthesis V
D560_RS02625	PWY-6583	pyruvate fermentation to butanol I
D560_RS02625	PWY-6863	pyruvate fermentation to hexanol
D560_RS02625	PWY-6883	pyruvate fermentation to butanol II
D560_RS02625	PWY-6944	androstenedione degradation
D560_RS02625	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
D560_RS02625	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
D560_RS02625	PWY-7007	methyl ketone biosynthesis
D560_RS02625	PWY-7046	4-coumarate degradation (anaerobic)
D560_RS02625	PWY-7094	fatty acid salvage
D560_RS02625	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
D560_RS02625	PWY-735	jasmonic acid biosynthesis
D560_RS02625	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
D560_RS02625	PWY-7606	docosahexaenoate biosynthesis III (mammals)
D560_RS02625	PWY-7726	D560_RS02625
D560_RS02905	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
D560_RS02905	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
D560_RS02985	PWY-2301	<i>myo</i>-inositol biosynthesis
D560_RS02985	PWY-4702	phytate degradation I
D560_RS02985	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
D560_RS03125	PWY-2201	folate transformations I
D560_RS03130	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
D560_RS03130	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
D560_RS03130	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS03130	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS03130	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
D560_RS03130	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
D560_RS03130	PWY-7205	CMP phosphorylation
D560_RS03130	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
D560_RS03130	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS03130	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS03130	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS03130	PWY-7224	purine deoxyribonucleosides salvage
D560_RS03130	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS03130	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
D560_RS03145	PWY-6829	tRNA methylation (yeast)
D560_RS03145	PWY-7285	methylwyosine biosynthesis
D560_RS03145	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
D560_RS03240	PWY-5155	&beta;-alanine biosynthesis III
D560_RS03260	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
D560_RS03260	PWY-6416	quinate degradation II
D560_RS03260	PWY-6707	gallate biosynthesis
D560_RS03315	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS03370	PWY-3781	aerobic respiration I (cytochrome c)
D560_RS03370	PWY-4521	arsenite oxidation I (respiratory)
D560_RS03370	PWY-6692	Fe(II) oxidation
D560_RS03370	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
D560_RS03370	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
D560_RS03505	PWY-3341	L-proline biosynthesis III
D560_RS03505	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
D560_RS03610	PWY-5747	2-methylcitrate cycle II
D560_RS03760	PWY-4041	&gamma;-glutamyl cycle
D560_RS03760	PWY-5826	hypoglycin biosynthesis
D560_RS03790	PWY-6610	adenine and adenosine salvage IV
D560_RS03800	PWY-723	alkylnitronates degradation
D560_RS03805	PWY-723	alkylnitronates degradation
D560_RS03845	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS03845	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS03875	PWY-7701	D560_RS03875
D560_RS04330	PWY-1042	glycolysis IV (plant cytosol)
D560_RS04330	PWY-1622	formaldehyde assimilation I (serine pathway)
D560_RS04330	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
D560_RS04330	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS04330	PWY-5723	Rubisco shunt
D560_RS04330	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS04330	PWY-6886	1-butanol autotrophic biosynthesis
D560_RS04330	PWY-6901	superpathway of glucose and xylose degradation
D560_RS04330	PWY-7003	glycerol degradation to butanol
D560_RS04330	PWY-7124	ethylene biosynthesis V (engineered)
D560_RS04330	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
D560_RS04385	PWY-5344	L-homocysteine biosynthesis
D560_RS04385	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
D560_RS04430	PWY-5958	acridone alkaloid biosynthesis
D560_RS04430	PWY-6543	4-aminobenzoate biosynthesis
D560_RS04430	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
D560_RS04430	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
D560_RS04470	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
D560_RS04470	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
D560_RS04485	PWY-2201	folate transformations I
D560_RS04485	PWY-5497	purine nucleobases degradation II (anaerobic)
D560_RS04490	PWY-4041	&gamma;-glutamyl cycle
D560_RS04490	PWY-5826	hypoglycin biosynthesis
D560_RS04510	PWY-5392	reductive TCA cycle II
D560_RS04510	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
D560_RS04510	PWY-5690	TCA cycle II (plants and fungi)
D560_RS04510	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS04510	PWY-6728	methylaspartate cycle
D560_RS04510	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS04510	PWY-7254	TCA cycle VII (acetate-producers)
D560_RS04510	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
D560_RS04535	PWY-2781	<i>cis</i>-zeatin biosynthesis
D560_RS04540	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
D560_RS04540	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
D560_RS04540	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
D560_RS04560	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
D560_RS04560	PWY-6148	tetrahydromethanopterin biosynthesis
D560_RS04560	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
D560_RS04560	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
D560_RS04600	PWY-5392	reductive TCA cycle II
D560_RS04600	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
D560_RS04600	PWY-5690	TCA cycle II (plants and fungi)
D560_RS04600	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS04600	PWY-6728	methylaspartate cycle
D560_RS04600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS04600	PWY-7254	TCA cycle VII (acetate-producers)
D560_RS04600	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
D560_RS04675	PWY-5386	methylglyoxal degradation I
D560_RS04695	PWY-1042	glycolysis IV (plant cytosol)
D560_RS04695	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
D560_RS04695	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS04695	PWY-5723	Rubisco shunt
D560_RS04695	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS04695	PWY-6886	1-butanol autotrophic biosynthesis
D560_RS04695	PWY-6901	superpathway of glucose and xylose degradation
D560_RS04695	PWY-7003	glycerol degradation to butanol
D560_RS04695	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
D560_RS04695	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
D560_RS04735	PWY-7158	L-phenylalanine degradation V
D560_RS04785	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
D560_RS04785	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS04785	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
D560_RS04785	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
D560_RS04800	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
D560_RS04800	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
D560_RS04800	PWY-7717	D560_RS04800
D560_RS04800	PWY-7733	D560_RS04800
D560_RS04800	PWY-7734	D560_RS04800
D560_RS04815	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
D560_RS04845	PWY-1361	benzoyl-CoA degradation I (aerobic)
D560_RS04845	PWY-5109	2-methylbutanoate biosynthesis
D560_RS04845	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
D560_RS04845	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
D560_RS04845	PWY-5177	glutaryl-CoA degradation
D560_RS04845	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS04845	PWY-6435	4-hydroxybenzoate biosynthesis V
D560_RS04845	PWY-6583	pyruvate fermentation to butanol I
D560_RS04845	PWY-6863	pyruvate fermentation to hexanol
D560_RS04845	PWY-6883	pyruvate fermentation to butanol II
D560_RS04845	PWY-6944	androstenedione degradation
D560_RS04845	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
D560_RS04845	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
D560_RS04845	PWY-7007	methyl ketone biosynthesis
D560_RS04845	PWY-7046	4-coumarate degradation (anaerobic)
D560_RS04845	PWY-7094	fatty acid salvage
D560_RS04845	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
D560_RS04845	PWY-735	jasmonic acid biosynthesis
D560_RS04845	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
D560_RS04845	PWY-7606	docosahexaenoate biosynthesis III (mammals)
D560_RS04845	PWY-7726	D560_RS04845
D560_RS04855	PWY-1622	formaldehyde assimilation I (serine pathway)
D560_RS04855	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
D560_RS04855	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS04855	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS04855	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
D560_RS04855	PWY-6549	L-glutamine biosynthesis III
D560_RS04855	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
D560_RS04855	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
D560_RS04855	PWY-7124	ethylene biosynthesis V (engineered)
D560_RS04860	PWY-6703	preQ<sub>0</sub> biosynthesis
D560_RS04875	PWY-5101	L-isoleucine biosynthesis II
D560_RS04875	PWY-5103	L-isoleucine biosynthesis III
D560_RS04875	PWY-5104	L-isoleucine biosynthesis IV
D560_RS04875	PWY-7111	pyruvate fermentation to isobutanol (engineered)
D560_RS04900	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
D560_RS04900	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
D560_RS04900	PWY-6936	seleno-amino acid biosynthesis
D560_RS04900	PWY-702	L-methionine biosynthesis II
D560_RS04915	PWY-2201	folate transformations I
D560_RS04980	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
D560_RS05030	PWY-1042	glycolysis IV (plant cytosol)
D560_RS05030	PWY-1622	formaldehyde assimilation I (serine pathway)
D560_RS05030	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
D560_RS05030	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS05030	PWY-5723	Rubisco shunt
D560_RS05030	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS05030	PWY-6886	1-butanol autotrophic biosynthesis
D560_RS05030	PWY-6901	superpathway of glucose and xylose degradation
D560_RS05030	PWY-7003	glycerol degradation to butanol
D560_RS05030	PWY-7124	ethylene biosynthesis V (engineered)
D560_RS05030	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
D560_RS05100	PWY-3341	L-proline biosynthesis III
D560_RS05100	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
D560_RS05125	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
D560_RS05170	PWY-1622	formaldehyde assimilation I (serine pathway)
D560_RS05170	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS05190	PWY-5667	CDP-diacylglycerol biosynthesis I
D560_RS05190	PWY-5981	CDP-diacylglycerol biosynthesis III
D560_RS05200	PWY-6004	glycine betaine biosynthesis V (from glycine)
D560_RS05210	PWY-2201	folate transformations I
D560_RS05210	PWY-6519	8-amino-7-oxononanoate biosynthesis I
D560_RS05215	PWY-6840	homoglutathione biosynthesis
D560_RS05215	PWY-7255	ergothioneine biosynthesis I (bacteria)
D560_RS05245	PWY-6825	phosphatidylcholine biosynthesis V
D560_RS05270	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
D560_RS05270	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
D560_RS05270	PWY-7717	D560_RS05270
D560_RS05270	PWY-7733	D560_RS05270
D560_RS05270	PWY-7734	D560_RS05270
D560_RS05325	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
D560_RS05325	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
D560_RS05350	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
D560_RS05350	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
D560_RS05560	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
D560_RS05560	PWY-6153	autoinducer AI-2 biosynthesis I
D560_RS05560	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
D560_RS05650	PWY-2201	folate transformations I
D560_RS05650	PWY-3841	folate transformations II
D560_RS05660	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
D560_RS05685	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
D560_RS05685	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
D560_RS05700	PWY-2941	L-lysine biosynthesis II
D560_RS05700	PWY-5097	L-lysine biosynthesis VI
D560_RS05775	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
D560_RS05775	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
D560_RS05775	PWY-6268	adenosylcobalamin salvage from cobalamin
D560_RS05775	PWY-6269	adenosylcobalamin salvage from cobinamide II
D560_RS05780	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
D560_RS05780	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
D560_RS05785	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
D560_RS05785	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
D560_RS05800	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
D560_RS05800	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
D560_RS05835	PWY-3961	phosphopantothenate biosynthesis II
D560_RS05840	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
D560_RS05855	PWY-3221	dTDP-L-rhamnose biosynthesis II
D560_RS05855	PWY-6808	dTDP-D-forosamine biosynthesis
D560_RS05855	PWY-6942	dTDP-D-desosamine biosynthesis
D560_RS05855	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
D560_RS05855	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
D560_RS05855	PWY-6974	dTDP-L-olivose biosynthesis
D560_RS05855	PWY-6976	dTDP-L-mycarose biosynthesis
D560_RS05855	PWY-7104	dTDP-L-megosamine biosynthesis
D560_RS05855	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
D560_RS05855	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
D560_RS05855	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
D560_RS05855	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
D560_RS05855	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
D560_RS05855	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
D560_RS05855	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
D560_RS05855	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
D560_RS05855	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
D560_RS05855	PWY-7688	D560_RS05855
D560_RS05865	PWY-3221	dTDP-L-rhamnose biosynthesis II
D560_RS05865	PWY-6808	dTDP-D-forosamine biosynthesis
D560_RS05865	PWY-6942	dTDP-D-desosamine biosynthesis
D560_RS05865	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
D560_RS05865	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
D560_RS05865	PWY-6974	dTDP-L-olivose biosynthesis
D560_RS05865	PWY-6976	dTDP-L-mycarose biosynthesis
D560_RS05865	PWY-7104	dTDP-L-megosamine biosynthesis
D560_RS05865	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
D560_RS05865	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
D560_RS05865	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
D560_RS05865	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
D560_RS05865	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
D560_RS05865	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
D560_RS05865	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
D560_RS05865	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
D560_RS05865	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
D560_RS05865	PWY-7688	D560_RS05865
D560_RS05920	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
D560_RS05920	PWY-7494	choline degradation IV
D560_RS05930	PWY-2941	L-lysine biosynthesis II
D560_RS05930	PWY-2942	L-lysine biosynthesis III
D560_RS05930	PWY-5097	L-lysine biosynthesis VI
D560_RS05960	PWY-6728	methylaspartate cycle
D560_RS05960	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS05960	PWY-7118	chitin degradation to ethanol
D560_RS05960	PWY-7294	xylose degradation IV
D560_RS05960	PWY-7295	L-arabinose degradation IV
D560_RS06010	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
D560_RS06120	PWY-6167	flavin biosynthesis II (archaea)
D560_RS06120	PWY-6168	flavin biosynthesis III (fungi)
D560_RS06180	PWY-5506	methanol oxidation to formaldehyde IV
D560_RS06625	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
D560_RS06625	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
D560_RS06650	PWY-2941	L-lysine biosynthesis II
D560_RS06650	PWY-2942	L-lysine biosynthesis III
D560_RS06650	PWY-5097	L-lysine biosynthesis VI
D560_RS06665	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
D560_RS06670	PWY-6164	3-dehydroquinate biosynthesis I
D560_RS06780	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
D560_RS06800	PWY-4381	fatty acid biosynthesis initiation I
D560_RS06800	PWY-5743	3-hydroxypropanoate cycle
D560_RS06800	PWY-5744	glyoxylate assimilation
D560_RS06800	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS06800	PWY-6679	jadomycin biosynthesis
D560_RS06800	PWY-6722	candicidin biosynthesis
D560_RS06800	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
D560_RS06830	PWY-6936	seleno-amino acid biosynthesis
D560_RS06865	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
D560_RS06870	PWY-6871	3-methylbutanol biosynthesis
D560_RS07060	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
D560_RS07090	PWY-3781	aerobic respiration I (cytochrome c)
D560_RS07090	PWY-6692	Fe(II) oxidation
D560_RS07090	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
D560_RS07090	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
D560_RS07175	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
D560_RS07175	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
D560_RS07250	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
D560_RS07250	PWY-3162	L-tryptophan degradation V (side chain pathway)
D560_RS07250	PWY-5057	L-valine degradation II
D560_RS07250	PWY-5076	L-leucine degradation III
D560_RS07250	PWY-5078	L-isoleucine degradation II
D560_RS07250	PWY-5079	L-phenylalanine degradation III
D560_RS07250	PWY-5082	L-methionine degradation III
D560_RS07250	PWY-5480	pyruvate fermentation to ethanol I
D560_RS07250	PWY-5486	pyruvate fermentation to ethanol II
D560_RS07250	PWY-5751	phenylethanol biosynthesis
D560_RS07250	PWY-6313	serotonin degradation
D560_RS07250	PWY-6333	acetaldehyde biosynthesis I
D560_RS07250	PWY-6342	noradrenaline and adrenaline degradation
D560_RS07250	PWY-6454	vancomycin resistance I
D560_RS07250	PWY-6587	pyruvate fermentation to ethanol III
D560_RS07250	PWY-6802	salidroside biosynthesis
D560_RS07250	PWY-6871	3-methylbutanol biosynthesis
D560_RS07250	PWY-6901	superpathway of glucose and xylose degradation
D560_RS07250	PWY-7013	L-1,2-propanediol degradation
D560_RS07250	PWY-7111	pyruvate fermentation to isobutanol (engineered)
D560_RS07250	PWY-7118	chitin degradation to ethanol
D560_RS07250	PWY-7396	butanol and isobutanol biosynthesis (engineered)
D560_RS07255	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
D560_RS07315	PWY-3781	aerobic respiration I (cytochrome c)
D560_RS07315	PWY-4521	arsenite oxidation I (respiratory)
D560_RS07315	PWY-6692	Fe(II) oxidation
D560_RS07315	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
D560_RS07385	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
D560_RS07400	PWY-6749	CMP-legionaminate biosynthesis I
D560_RS07440	PWY-7294	xylose degradation IV
D560_RS07440	PWY-7295	L-arabinose degradation IV
D560_RS07445	PWY-1042	glycolysis IV (plant cytosol)
D560_RS07445	PWY-1622	formaldehyde assimilation I (serine pathway)
D560_RS07445	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
D560_RS07445	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS07445	PWY-5723	Rubisco shunt
D560_RS07445	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS07445	PWY-6886	1-butanol autotrophic biosynthesis
D560_RS07445	PWY-6901	superpathway of glucose and xylose degradation
D560_RS07445	PWY-7003	glycerol degradation to butanol
D560_RS07445	PWY-7124	ethylene biosynthesis V (engineered)
D560_RS07445	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
D560_RS07505	PWY-5331	taurine biosynthesis
D560_RS07625	PWY-5101	L-isoleucine biosynthesis II
D560_RS07625	PWY-5103	L-isoleucine biosynthesis III
D560_RS07625	PWY-5104	L-isoleucine biosynthesis IV
D560_RS07625	PWY-7111	pyruvate fermentation to isobutanol (engineered)
D560_RS07820	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
D560_RS07855	PWY-5958	acridone alkaloid biosynthesis
D560_RS07855	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
D560_RS07855	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
D560_RS07860	PWY-5958	acridone alkaloid biosynthesis
D560_RS07860	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
D560_RS07860	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
D560_RS07865	PWY-181	photorespiration
D560_RS07870	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
D560_RS07870	PWY-5723	Rubisco shunt
D560_RS07905	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
D560_RS07905	PWY-6148	tetrahydromethanopterin biosynthesis
D560_RS07905	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
D560_RS07905	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
D560_RS07955	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS07965	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS07995	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
D560_RS07995	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
D560_RS08070	PWY-723	alkylnitronates degradation
D560_RS08090	PWY-1361	benzoyl-CoA degradation I (aerobic)
D560_RS08090	PWY-5109	2-methylbutanoate biosynthesis
D560_RS08090	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
D560_RS08090	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
D560_RS08090	PWY-5177	glutaryl-CoA degradation
D560_RS08090	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS08090	PWY-6435	4-hydroxybenzoate biosynthesis V
D560_RS08090	PWY-6583	pyruvate fermentation to butanol I
D560_RS08090	PWY-6863	pyruvate fermentation to hexanol
D560_RS08090	PWY-6883	pyruvate fermentation to butanol II
D560_RS08090	PWY-6944	androstenedione degradation
D560_RS08090	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
D560_RS08090	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
D560_RS08090	PWY-7007	methyl ketone biosynthesis
D560_RS08090	PWY-7046	4-coumarate degradation (anaerobic)
D560_RS08090	PWY-7094	fatty acid salvage
D560_RS08090	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
D560_RS08090	PWY-735	jasmonic acid biosynthesis
D560_RS08090	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
D560_RS08090	PWY-7606	docosahexaenoate biosynthesis III (mammals)
D560_RS08090	PWY-7726	D560_RS08090
D560_RS08105	PWY-6840	homoglutathione biosynthesis
D560_RS08105	PWY-7255	ergothioneine biosynthesis I (bacteria)
D560_RS08135	PWY-5344	L-homocysteine biosynthesis
D560_RS08175	PWY-5686	UMP biosynthesis
D560_RS08185	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
D560_RS08240	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS08240	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS08260	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
D560_RS08270	PWY-2201	folate transformations I
D560_RS08380	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
D560_RS08395	PWY-6605	adenine and adenosine salvage II
D560_RS08395	PWY-6610	adenine and adenosine salvage IV
D560_RS08470	PWY-5839	menaquinol-7 biosynthesis
D560_RS08470	PWY-5844	menaquinol-9 biosynthesis
D560_RS08470	PWY-5849	menaquinol-6 biosynthesis
D560_RS08470	PWY-5890	menaquinol-10 biosynthesis
D560_RS08470	PWY-5891	menaquinol-11 biosynthesis
D560_RS08470	PWY-5892	menaquinol-12 biosynthesis
D560_RS08470	PWY-5895	menaquinol-13 biosynthesis
D560_RS08505	PWY-4381	fatty acid biosynthesis initiation I
D560_RS08585	PWY-6910	hydroxymethylpyrimidine salvage
D560_RS08585	PWY-7356	thiamin salvage IV (yeast)
D560_RS08585	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
D560_RS08590	PWY-6891	thiazole biosynthesis II (Bacillus)
D560_RS08590	PWY-6892	thiazole biosynthesis I (E. coli)
D560_RS08605	PWY-2201	folate transformations I
D560_RS08605	PWY-3841	folate transformations II
D560_RS08760	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
D560_RS08760	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
D560_RS08760	PWY-6897	thiamin salvage II
D560_RS08760	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
D560_RS08760	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
D560_RS08760	PWY-7356	thiamin salvage IV (yeast)
D560_RS08760	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
D560_RS08770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS08885	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
D560_RS08890	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
D560_RS08890	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
D560_RS08890	PWY-6897	thiamin salvage II
D560_RS08890	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
D560_RS08890	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
D560_RS08890	PWY-7356	thiamin salvage IV (yeast)
D560_RS08890	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
D560_RS08950	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
D560_RS08980	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
D560_RS08980	PWY-6416	quinate degradation II
D560_RS08980	PWY-6707	gallate biosynthesis
D560_RS09045	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
D560_RS09045	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS09045	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
D560_RS09045	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
D560_RS09045	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS09045	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS09045	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS09045	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
D560_RS09050	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
D560_RS09050	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS09050	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
D560_RS09050	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
D560_RS09050	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS09050	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS09050	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS09050	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
D560_RS09090	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
D560_RS09095	PWY-5392	reductive TCA cycle II
D560_RS09095	PWY-5537	pyruvate fermentation to acetate V
D560_RS09095	PWY-5538	pyruvate fermentation to acetate VI
D560_RS09095	PWY-5690	TCA cycle II (plants and fungi)
D560_RS09095	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS09095	PWY-6728	methylaspartate cycle
D560_RS09095	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS09095	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
D560_RS09150	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
D560_RS09155	PWY-1361	benzoyl-CoA degradation I (aerobic)
D560_RS09160	PWY-6085	2,4-dichlorophenoxyacetate  degradation
D560_RS09160	PWY-6086	4-chloro-2-methylphenoxyacetate degradation
D560_RS09165	PWY-101	photosynthesis light reactions
D560_RS09165	PWY-6085	2,4-dichlorophenoxyacetate  degradation
D560_RS09165	PWY-6086	4-chloro-2-methylphenoxyacetate degradation
D560_RS09165	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
D560_RS09195	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS09195	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS09235	PWY-1622	formaldehyde assimilation I (serine pathway)
D560_RS09235	PWY-181	photorespiration
D560_RS09235	PWY-2161	folate polyglutamylation
D560_RS09235	PWY-2201	folate transformations I
D560_RS09235	PWY-3661	glycine betaine degradation I
D560_RS09235	PWY-3661-1	glycine betaine degradation II (mammalian)
D560_RS09235	PWY-3841	folate transformations II
D560_RS09235	PWY-5497	purine nucleobases degradation II (anaerobic)
D560_RS09255	PWY-5525	D-glucuronate degradation I
D560_RS09260	PWY-6167	flavin biosynthesis II (archaea)
D560_RS09260	PWY-6168	flavin biosynthesis III (fungi)
D560_RS09260	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS09340	PWY-4983	L-citrulline-nitric oxide cycle
D560_RS09340	PWY-4984	urea cycle
D560_RS09340	PWY-5	canavanine biosynthesis
D560_RS09340	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS09340	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS09350	PWY-5692	allantoin degradation to glyoxylate II
D560_RS09350	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
D560_RS09355	PWY-5381	pyridine nucleotide cycling (plants)
D560_RS09380	PWY-5316	nicotine biosynthesis
D560_RS09380	PWY-5381	pyridine nucleotide cycling (plants)
D560_RS09380	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
D560_RS09380	PWY-7342	superpathway of nicotine biosynthesis
D560_RS09415	PWY-5386	methylglyoxal degradation I
D560_RS09750	PWY-5686	UMP biosynthesis
D560_RS09765	PWY-2201	folate transformations I
D560_RS09780	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
D560_RS09780	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
D560_RS09785	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
D560_RS09785	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
D560_RS09785	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
D560_RS09805	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
D560_RS09805	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
D560_RS09810	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
D560_RS09810	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
D560_RS09830	PWY-2201	folate transformations I
D560_RS09830	PWY-5497	purine nucleobases degradation II (anaerobic)
D560_RS09870	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS09970	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
D560_RS09970	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
D560_RS09970	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
D560_RS10090	PWY-7560	methylerythritol phosphate pathway II
D560_RS10095	PWY-7560	methylerythritol phosphate pathway II
D560_RS10305	PWY-5381	pyridine nucleotide cycling (plants)
D560_RS10335	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS10350	PWY-4381	fatty acid biosynthesis initiation I
D560_RS10350	PWY-5743	3-hydroxypropanoate cycle
D560_RS10350	PWY-5744	glyoxylate assimilation
D560_RS10350	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS10350	PWY-6679	jadomycin biosynthesis
D560_RS10350	PWY-6722	candicidin biosynthesis
D560_RS10350	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
D560_RS10405	PWY-2201	folate transformations I
D560_RS10430	PWY-4381	fatty acid biosynthesis initiation I
D560_RS10435	PWY-4381	fatty acid biosynthesis initiation I
D560_RS10435	PWY-6799	fatty acid biosynthesis (plant mitochondria)
D560_RS10435	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
D560_RS10440	PWY-5367	petroselinate biosynthesis
D560_RS10440	PWY-5515	L-arabinose degradation II
D560_RS10440	PWY-5525	D-glucuronate degradation I
D560_RS10440	PWY-5971	palmitate biosynthesis II (bacteria and plants)
D560_RS10440	PWY-5973	<i>cis</i>-vaccenate biosynthesis
D560_RS10440	PWY-5989	stearate biosynthesis II (bacteria and plants)
D560_RS10440	PWY-5994	palmitate biosynthesis I (animals and fungi)
D560_RS10440	PWY-6113	superpathway of mycolate biosynthesis
D560_RS10440	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
D560_RS10440	PWY-6519	8-amino-7-oxononanoate biosynthesis I
D560_RS10440	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
D560_RS10440	PWY-7663	gondoate biosynthesis (anaerobic)
D560_RS10440	PWY-7664	oleate biosynthesis IV (anaerobic)
D560_RS10440	PWYG-321	mycolate biosynthesis
D560_RS10555	PWY-5642	2,4-dinitrotoluene degradation
D560_RS10555	PWY-6373	acrylate degradation
D560_RS10580	PWY-3941	&beta;-alanine biosynthesis II
D560_RS10580	PWY-5104	L-isoleucine biosynthesis IV
D560_RS10580	PWY-5747	2-methylcitrate cycle II
D560_RS10580	PWY-6672	<i>cis</i>-genanyl-CoA degradation
D560_RS10580	PWY-7118	chitin degradation to ethanol
D560_RS10595	PWY-6672	<i>cis</i>-genanyl-CoA degradation
D560_RS10595	PWY-7118	chitin degradation to ethanol
D560_RS10670	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS10685	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
D560_RS10685	PWY-7177	UTP and CTP dephosphorylation II
D560_RS10685	PWY-7185	UTP and CTP dephosphorylation I
D560_RS10695	PWY-1042	glycolysis IV (plant cytosol)
D560_RS10695	PWY-1622	formaldehyde assimilation I (serine pathway)
D560_RS10695	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
D560_RS10695	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS10695	PWY-5723	Rubisco shunt
D560_RS10695	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS10695	PWY-6886	1-butanol autotrophic biosynthesis
D560_RS10695	PWY-6901	superpathway of glucose and xylose degradation
D560_RS10695	PWY-7003	glycerol degradation to butanol
D560_RS10695	PWY-7124	ethylene biosynthesis V (engineered)
D560_RS10695	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
D560_RS10760	PWY-6825	phosphatidylcholine biosynthesis V
D560_RS10780	PWY-5747	2-methylcitrate cycle II
D560_RS10785	PWY-1622	formaldehyde assimilation I (serine pathway)
D560_RS10785	PWY-5392	reductive TCA cycle II
D560_RS10785	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
D560_RS10785	PWY-5690	TCA cycle II (plants and fungi)
D560_RS10785	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS10785	PWY-6728	methylaspartate cycle
D560_RS10785	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS10785	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
D560_RS10785	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
D560_RS10805	PWY-3781	aerobic respiration I (cytochrome c)
D560_RS10805	PWY-4302	aerobic respiration III (alternative oxidase pathway)
D560_RS10805	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
D560_RS10805	PWY-5690	TCA cycle II (plants and fungi)
D560_RS10805	PWY-6728	methylaspartate cycle
D560_RS10805	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS10805	PWY-7254	TCA cycle VII (acetate-producers)
D560_RS10805	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
D560_RS10810	PWY-3781	aerobic respiration I (cytochrome c)
D560_RS10810	PWY-4302	aerobic respiration III (alternative oxidase pathway)
D560_RS10810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
D560_RS10810	PWY-5690	TCA cycle II (plants and fungi)
D560_RS10810	PWY-6728	methylaspartate cycle
D560_RS10810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS10810	PWY-7254	TCA cycle VII (acetate-producers)
D560_RS10810	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
D560_RS10890	PWY-6891	thiazole biosynthesis II (Bacillus)
D560_RS10890	PWY-6892	thiazole biosynthesis I (E. coli)
D560_RS10890	PWY-7560	methylerythritol phosphate pathway II
D560_RS10905	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
D560_RS10985	PWY-5676	acetyl-CoA fermentation to butanoate II
D560_RS10985	PWY-5741	ethylmalonyl-CoA pathway
D560_RS10985	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
D560_RS11150	PWY-4983	L-citrulline-nitric oxide cycle
D560_RS11150	PWY-4984	urea cycle
D560_RS11150	PWY-5	canavanine biosynthesis
D560_RS11150	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS11150	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS11165	PWY-181	photorespiration
D560_RS11170	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
D560_RS11170	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
D560_RS11170	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
D560_RS11170	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
D560_RS11170	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
D560_RS11170	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
D560_RS11170	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
D560_RS11170	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
D560_RS11170	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
D560_RS11170	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
D560_RS11190	PWY-3461	L-tyrosine biosynthesis II
D560_RS11190	PWY-3462	L-phenylalanine biosynthesis II
D560_RS11190	PWY-6120	L-tyrosine biosynthesis III
D560_RS11190	PWY-6627	salinosporamide A biosynthesis
D560_RS11190	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
D560_RS11190	PWY-7626	bacilysin biosynthesis
D560_RS11200	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
D560_RS11210	PWY-7205	CMP phosphorylation
D560_RS11245	PWY-6936	seleno-amino acid biosynthesis
D560_RS11310	PWY-5278	sulfite oxidation III
D560_RS11310	PWY-5340	sulfate activation for sulfonation
D560_RS11310	PWY-6683	sulfate reduction III (assimilatory)
D560_RS11310	PWY-6932	selenate reduction
D560_RS11315	PWY-5278	sulfite oxidation III
D560_RS11315	PWY-5340	sulfate activation for sulfonation
D560_RS11315	PWY-6683	sulfate reduction III (assimilatory)
D560_RS11315	PWY-6932	selenate reduction
D560_RS11365	PWY-6938	NADH repair
D560_RS11375	PWY-5176	coumarin biosynthesis (via 2-coumarate)
D560_RS11465	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
D560_RS11465	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
D560_RS11515	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
D560_RS11515	PWY-5723	Rubisco shunt
D560_RS11530	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS11625	PWY-5350	thiosulfate disproportionation III (rhodanese)
D560_RS11675	PWY-5663	tetrahydrobiopterin biosynthesis I
D560_RS11675	PWY-5664	tetrahydrobiopterin biosynthesis II
D560_RS11675	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
D560_RS11675	PWY-6703	preQ<sub>0</sub> biosynthesis
D560_RS11675	PWY-6983	tetrahydrobiopterin biosynthesis III
D560_RS11675	PWY-7442	drosopterin and aurodrosopterin biosynthesis
D560_RS11720	PWY-7294	xylose degradation IV
D560_RS11720	PWY-7295	L-arabinose degradation IV
D560_RS11765	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS11790	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
D560_RS11790	PWY-6164	3-dehydroquinate biosynthesis I
D560_RS11790	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
D560_RS11880	PWY-6123	inosine-5'-phosphate biosynthesis I
D560_RS11880	PWY-6124	inosine-5'-phosphate biosynthesis II
D560_RS11880	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS11880	PWY-7234	inosine-5'-phosphate biosynthesis III
D560_RS11950	PWY-7255	ergothioneine biosynthesis I (bacteria)
D560_RS12090	PWY-4983	L-citrulline-nitric oxide cycle
D560_RS12090	PWY-4984	urea cycle
D560_RS12090	PWY-5	canavanine biosynthesis
D560_RS12090	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS12090	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS12095	PWY-4981	L-proline biosynthesis II (from arginine)
D560_RS12095	PWY-4984	urea cycle
D560_RS12095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS12220	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS12225	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
D560_RS12250	PWY-6854	ethylene biosynthesis III (microbes)
D560_RS12265	PWY-1361	benzoyl-CoA degradation I (aerobic)
D560_RS12265	PWY-2361	3-oxoadipate degradation
D560_RS12265	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
D560_RS12320	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
D560_RS12320	PWY-6853	ethylene biosynthesis II (microbes)
D560_RS12320	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
D560_RS12645	PWY-1361	benzoyl-CoA degradation I (aerobic)
D560_RS12645	PWY-5109	2-methylbutanoate biosynthesis
D560_RS12645	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
D560_RS12645	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
D560_RS12645	PWY-5177	glutaryl-CoA degradation
D560_RS12645	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS12645	PWY-6435	4-hydroxybenzoate biosynthesis V
D560_RS12645	PWY-6583	pyruvate fermentation to butanol I
D560_RS12645	PWY-6863	pyruvate fermentation to hexanol
D560_RS12645	PWY-6883	pyruvate fermentation to butanol II
D560_RS12645	PWY-6944	androstenedione degradation
D560_RS12645	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
D560_RS12645	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
D560_RS12645	PWY-7007	methyl ketone biosynthesis
D560_RS12645	PWY-7046	4-coumarate degradation (anaerobic)
D560_RS12645	PWY-7094	fatty acid salvage
D560_RS12645	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
D560_RS12645	PWY-735	jasmonic acid biosynthesis
D560_RS12645	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
D560_RS12645	PWY-7606	docosahexaenoate biosynthesis III (mammals)
D560_RS12645	PWY-7726	D560_RS12645
D560_RS12675	PWY-1361	benzoyl-CoA degradation I (aerobic)
D560_RS12675	PWY-5109	2-methylbutanoate biosynthesis
D560_RS12675	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
D560_RS12675	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
D560_RS12675	PWY-5177	glutaryl-CoA degradation
D560_RS12675	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS12675	PWY-6435	4-hydroxybenzoate biosynthesis V
D560_RS12675	PWY-6583	pyruvate fermentation to butanol I
D560_RS12675	PWY-6863	pyruvate fermentation to hexanol
D560_RS12675	PWY-6883	pyruvate fermentation to butanol II
D560_RS12675	PWY-6944	androstenedione degradation
D560_RS12675	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
D560_RS12675	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
D560_RS12675	PWY-7007	methyl ketone biosynthesis
D560_RS12675	PWY-7046	4-coumarate degradation (anaerobic)
D560_RS12675	PWY-7094	fatty acid salvage
D560_RS12675	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
D560_RS12675	PWY-735	jasmonic acid biosynthesis
D560_RS12675	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
D560_RS12675	PWY-7606	docosahexaenoate biosynthesis III (mammals)
D560_RS12675	PWY-7726	D560_RS12675
D560_RS12685	PWY-1361	benzoyl-CoA degradation I (aerobic)
D560_RS12685	PWY-5109	2-methylbutanoate biosynthesis
D560_RS12685	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
D560_RS12685	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
D560_RS12685	PWY-5177	glutaryl-CoA degradation
D560_RS12685	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
D560_RS12685	PWY-6435	4-hydroxybenzoate biosynthesis V
D560_RS12685	PWY-6583	pyruvate fermentation to butanol I
D560_RS12685	PWY-6863	pyruvate fermentation to hexanol
D560_RS12685	PWY-6883	pyruvate fermentation to butanol II
D560_RS12685	PWY-6944	androstenedione degradation
D560_RS12685	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
D560_RS12685	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
D560_RS12685	PWY-7007	methyl ketone biosynthesis
D560_RS12685	PWY-7046	4-coumarate degradation (anaerobic)
D560_RS12685	PWY-7094	fatty acid salvage
D560_RS12685	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
D560_RS12685	PWY-735	jasmonic acid biosynthesis
D560_RS12685	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
D560_RS12685	PWY-7606	docosahexaenoate biosynthesis III (mammals)
D560_RS12685	PWY-7726	D560_RS12685
D560_RS12840	PWY-3781	aerobic respiration I (cytochrome c)
D560_RS12840	PWY-4521	arsenite oxidation I (respiratory)
D560_RS12840	PWY-6692	Fe(II) oxidation
D560_RS12840	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
D560_RS12840	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
D560_RS12905	PWY-5169	cyanurate degradation
D560_RS12905	PWY-5703	urea degradation I
D560_RS12905	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
D560_RS12990	PWY-6823	molybdenum cofactor biosynthesis
D560_RS12995	PWY-5964	guanylyl molybdenum cofactor biosynthesis
D560_RS12995	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
D560_RS13000	PWY-6823	molybdenum cofactor biosynthesis
D560_RS13010	PWY-6823	molybdenum cofactor biosynthesis
D560_RS13165	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
D560_RS13165	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
D560_RS13165	PWY-7717	D560_RS13165
D560_RS13165	PWY-7733	D560_RS13165
D560_RS13165	PWY-7734	D560_RS13165
D560_RS13295	PWY-6854	ethylene biosynthesis III (microbes)
D560_RS13380	PWY-6012	acyl carrier protein metabolism I
D560_RS13380	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
D560_RS13385	PWY-6902	chitin degradation II
D560_RS13395	PWY-5269	cardiolipin biosynthesis II
D560_RS13395	PWY-5668	cardiolipin biosynthesis I
D560_RS13405	PWY-6700	queuosine biosynthesis
D560_RS13410	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS13520	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
D560_RS13605	PWY-6700	queuosine biosynthesis
D560_RS13615	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
D560_RS13615	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
D560_RS13620	PWY-7183	pyrimidine nucleobases salvage I
D560_RS13655	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
D560_RS13655	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
D560_RS13655	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
D560_RS13655	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
D560_RS13655	PWY-6978	plastoquinol-9 biosynthesis II
D560_RS13675	PWY-1281	sulfoacetaldehyde degradation I
D560_RS13675	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
D560_RS13675	PWY-5482	pyruvate fermentation to acetate II
D560_RS13675	PWY-5485	pyruvate fermentation to acetate IV
D560_RS13675	PWY-5497	purine nucleobases degradation II (anaerobic)
D560_RS13675	PWY-6637	sulfolactate degradation II
D560_RS13675	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
D560_RS13690	PWY-2201	folate transformations I
D560_RS13695	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
D560_RS13695	PWY-5723	Rubisco shunt
D560_RS13695	PWY-6891	thiazole biosynthesis II (Bacillus)
D560_RS13695	PWY-6892	thiazole biosynthesis I (E. coli)
D560_RS13695	PWY-6901	superpathway of glucose and xylose degradation
D560_RS13695	PWY-7560	methylerythritol phosphate pathway II
D560_RS13700	PWY-1042	glycolysis IV (plant cytosol)
D560_RS13700	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS13700	PWY-6901	superpathway of glucose and xylose degradation
D560_RS13700	PWY-7003	glycerol degradation to butanol
D560_RS13705	PWY-1042	glycolysis IV (plant cytosol)
D560_RS13705	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS13705	PWY-6886	1-butanol autotrophic biosynthesis
D560_RS13705	PWY-6901	superpathway of glucose and xylose degradation
D560_RS13705	PWY-7003	glycerol degradation to butanol
D560_RS13715	PWY-5971	palmitate biosynthesis II (bacteria and plants)
D560_RS13715	PWY-5973	<i>cis</i>-vaccenate biosynthesis
D560_RS13715	PWY-5989	stearate biosynthesis II (bacteria and plants)
D560_RS13715	PWY-6113	superpathway of mycolate biosynthesis
D560_RS13715	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
D560_RS13715	PWY-6519	8-amino-7-oxononanoate biosynthesis I
D560_RS13715	PWY-7663	gondoate biosynthesis (anaerobic)
D560_RS13715	PWY-7664	oleate biosynthesis IV (anaerobic)
D560_RS13715	PWYG-321	mycolate biosynthesis
D560_RS13725	PWY-5482	pyruvate fermentation to acetate II
D560_RS13725	PWY-5485	pyruvate fermentation to acetate IV
D560_RS13725	PWY-5497	purine nucleobases degradation II (anaerobic)
D560_RS13730	PWY-1281	sulfoacetaldehyde degradation I
D560_RS13730	PWY-5482	pyruvate fermentation to acetate II
D560_RS13730	PWY-5485	pyruvate fermentation to acetate IV
D560_RS13730	PWY-5497	purine nucleobases degradation II (anaerobic)
D560_RS13730	PWY-6637	sulfolactate degradation II
D560_RS13860	PWY-1042	glycolysis IV (plant cytosol)
D560_RS13860	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
D560_RS13860	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS13860	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
D560_RS13860	PWY-7385	1,3-propanediol biosynthesis (engineered)
D560_RS13865	PWY-6123	inosine-5'-phosphate biosynthesis I
D560_RS13865	PWY-6124	inosine-5'-phosphate biosynthesis II
D560_RS13865	PWY-7234	inosine-5'-phosphate biosynthesis III
D560_RS13870	PWY-6123	inosine-5'-phosphate biosynthesis I
D560_RS13870	PWY-7234	inosine-5'-phosphate biosynthesis III
D560_RS14005	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
D560_RS14005	PWY-5723	Rubisco shunt
D560_RS14010	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS14010	PWY-5686	UMP biosynthesis
D560_RS14010	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS14095	PWY-6614	tetrahydrofolate biosynthesis
D560_RS14100	PWY-6749	CMP-legionaminate biosynthesis I
D560_RS14235	PWY-5686	UMP biosynthesis
D560_RS14280	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
D560_RS14280	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
D560_RS14280	PWY-6936	seleno-amino acid biosynthesis
D560_RS14280	PWY-702	L-methionine biosynthesis II
D560_RS14295	PWY-5392	reductive TCA cycle II
D560_RS14295	PWY-5537	pyruvate fermentation to acetate V
D560_RS14295	PWY-5538	pyruvate fermentation to acetate VI
D560_RS14295	PWY-5690	TCA cycle II (plants and fungi)
D560_RS14295	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS14295	PWY-6728	methylaspartate cycle
D560_RS14295	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS14295	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
D560_RS14300	PWY-5392	reductive TCA cycle II
D560_RS14300	PWY-5537	pyruvate fermentation to acetate V
D560_RS14300	PWY-5538	pyruvate fermentation to acetate VI
D560_RS14300	PWY-5690	TCA cycle II (plants and fungi)
D560_RS14300	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS14300	PWY-6728	methylaspartate cycle
D560_RS14300	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS14300	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
D560_RS14320	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
D560_RS14320	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
D560_RS14325	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
D560_RS14325	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
D560_RS14440	PWY-702	L-methionine biosynthesis II
D560_RS14485	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
D560_RS14530	PWY-7396	butanol and isobutanol biosynthesis (engineered)
D560_RS14535	PWY-2941	L-lysine biosynthesis II
D560_RS14535	PWY-2942	L-lysine biosynthesis III
D560_RS14535	PWY-5097	L-lysine biosynthesis VI
D560_RS14535	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
D560_RS14535	PWY-6559	spermidine biosynthesis II
D560_RS14535	PWY-6562	norspermidine biosynthesis
D560_RS14535	PWY-7153	grixazone biosynthesis
D560_RS14535	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
D560_RS14675	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
D560_RS14675	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS14675	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS14675	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
D560_RS14745	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
D560_RS14745	PWY-6167	flavin biosynthesis II (archaea)
D560_RS14745	PWY-6168	flavin biosynthesis III (fungi)
D560_RS14755	PWY-6825	phosphatidylcholine biosynthesis V
D560_RS15000	PWY-5901	2,3-dihydroxybenzoate biosynthesis
D560_RS15025	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
D560_RS15025	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
D560_RS15035	PWY-6891	thiazole biosynthesis II (Bacillus)
D560_RS15035	PWY-6892	thiazole biosynthesis I (E. coli)
D560_RS15035	PWY-7560	methylerythritol phosphate pathway II
D560_RS15050	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
D560_RS15050	PWY-2201	folate transformations I
D560_RS15050	PWY-3841	folate transformations II
D560_RS15050	PWY-5030	L-histidine degradation III
D560_RS15050	PWY-5497	purine nucleobases degradation II (anaerobic)
D560_RS15050	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
D560_RS15105	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
D560_RS15105	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
D560_RS15105	PWY-6148	tetrahydromethanopterin biosynthesis
D560_RS15215	PWY-5669	phosphatidylethanolamine biosynthesis I
D560_RS15220	PWY-5103	L-isoleucine biosynthesis III
D560_RS15220	PWY-7111	pyruvate fermentation to isobutanol (engineered)
D560_RS15225	PWY-5101	L-isoleucine biosynthesis II
D560_RS15225	PWY-5103	L-isoleucine biosynthesis III
D560_RS15225	PWY-5104	L-isoleucine biosynthesis IV
D560_RS15225	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
D560_RS15225	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
D560_RS15225	PWY-6389	(<i>S</i>)-acetoin biosynthesis
D560_RS15225	PWY-7111	pyruvate fermentation to isobutanol (engineered)
D560_RS15230	PWY-5101	L-isoleucine biosynthesis II
D560_RS15230	PWY-5103	L-isoleucine biosynthesis III
D560_RS15230	PWY-5104	L-isoleucine biosynthesis IV
D560_RS15230	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
D560_RS15230	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
D560_RS15230	PWY-6389	(<i>S</i>)-acetoin biosynthesis
D560_RS15230	PWY-7111	pyruvate fermentation to isobutanol (engineered)
D560_RS15445	PWY-5676	acetyl-CoA fermentation to butanoate II
D560_RS15445	PWY-5741	ethylmalonyl-CoA pathway
D560_RS15445	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
D560_RS15475	PWY-4202	arsenate detoxification I (glutaredoxin)
D560_RS15475	PWY-4621	arsenate detoxification II (glutaredoxin)
D560_RS15580	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
D560_RS15580	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
D560_RS15580	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
D560_RS15580	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
D560_RS15580	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
D560_RS15580	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
D560_RS15690	PWY-5484	glycolysis II (from fructose 6-phosphate)
D560_RS15715	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
D560_RS15715	PWY-622	starch biosynthesis
D560_RS15725	PWY-5971	palmitate biosynthesis II (bacteria and plants)
D560_RS15725	PWY-5973	<i>cis</i>-vaccenate biosynthesis
D560_RS15725	PWY-5989	stearate biosynthesis II (bacteria and plants)
D560_RS15725	PWY-5994	palmitate biosynthesis I (animals and fungi)
D560_RS15725	PWY-6113	superpathway of mycolate biosynthesis
D560_RS15725	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
D560_RS15725	PWY-6519	8-amino-7-oxononanoate biosynthesis I
D560_RS15725	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
D560_RS15725	PWY-7663	gondoate biosynthesis (anaerobic)
D560_RS15725	PWY-7664	oleate biosynthesis IV (anaerobic)
D560_RS15725	PWYG-321	mycolate biosynthesis
D560_RS15750	PWY-7294	xylose degradation IV
D560_RS15750	PWY-7295	L-arabinose degradation IV
D560_RS15750	PWY-7560	methylerythritol phosphate pathway II
D560_RS15755	PWY-5667	CDP-diacylglycerol biosynthesis I
D560_RS15755	PWY-5981	CDP-diacylglycerol biosynthesis III
D560_RS15805	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
D560_RS15805	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
D560_RS15805	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
D560_RS15805	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
D560_RS16035	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS16035	PWY-6549	L-glutamine biosynthesis III
D560_RS16035	PWY-6728	methylaspartate cycle
D560_RS16035	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
D560_RS16035	PWY-7124	ethylene biosynthesis V (engineered)
D560_RS16035	PWY-7254	TCA cycle VII (acetate-producers)
D560_RS16035	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
D560_RS16220	PWY-5669	phosphatidylethanolamine biosynthesis I
D560_RS16265	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
D560_RS16265	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
D560_RS16300	PWY-3341	L-proline biosynthesis III
D560_RS16300	PWY-4981	L-proline biosynthesis II (from arginine)
D560_RS16300	PWY-6344	L-ornithine degradation II (Stickland reaction)
D560_RS16470	PWY-381	nitrate reduction II (assimilatory)
D560_RS16470	PWY-5675	nitrate reduction V (assimilatory)
D560_RS16470	PWY-6549	L-glutamine biosynthesis III
D560_RS16470	PWY-6963	ammonia assimilation cycle I
D560_RS16470	PWY-6964	ammonia assimilation cycle II
D560_RS16480	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
D560_RS16535	PWY-6617	adenosine nucleotides degradation III
D560_RS16550	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS16715	PWY-5381	pyridine nucleotide cycling (plants)
D560_RS16715	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
D560_RS16715	PWY-6596	adenosine nucleotides degradation I
D560_RS16715	PWY-6606	guanosine nucleotides degradation II
D560_RS16715	PWY-6607	guanosine nucleotides degradation I
D560_RS16715	PWY-6608	guanosine nucleotides degradation III
D560_RS16715	PWY-7185	UTP and CTP dephosphorylation I
D560_RS16750	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
D560_RS16750	PWY-5368	dimorphecolate biosynthesis
D560_RS16750	PWY-5995	linoleate biosynthesis I (plants)
D560_RS16750	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
D560_RS16750	PWY-6803	phosphatidylcholine acyl editing
D560_RS16750	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
D560_RS16750	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
D560_RS16750	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
D560_RS16750	PWY-7470	phosphatidylcholine biosynthesis VII
D560_RS16750	PWY-7618	ricinoleate biosynthesis
D560_RS16915	PWY-4261	glycerol degradation I
D560_RS16915	PWY-6118	glycerol-3-phosphate shuttle
D560_RS16915	PWY-6952	glycerophosphodiester degradation
D560_RS16990	PWY-6703	preQ<sub>0</sub> biosynthesis
D560_RS17050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
D560_RS17100	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
D560_RS17100	PWY-6164	3-dehydroquinate biosynthesis I
D560_RS17100	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
D560_RS17230	PWY-6854	ethylene biosynthesis III (microbes)
D560_RS17380	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS17385	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
D560_RS17385	PWY-6596	adenosine nucleotides degradation I
D560_RS17385	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
D560_RS17795	PWY-6823	molybdenum cofactor biosynthesis
D560_RS17795	PWY-6891	thiazole biosynthesis II (Bacillus)
D560_RS17795	PWY-6892	thiazole biosynthesis I (E. coli)
D560_RS17795	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
D560_RS17815	PWY-5913	TCA cycle VI (obligate autotrophs)
D560_RS17815	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
D560_RS17815	PWY-6638	sulfolactate degradation III
D560_RS17815	PWY-6642	(<i>R</i>)-cysteate degradation
D560_RS17815	PWY-6643	coenzyme M biosynthesis II
D560_RS17815	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
D560_RS17815	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
D560_RS17815	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
