locus-tag	class	description
FYA69_RS00005	COG0445	tRNA wobble uridine modification
FYA69_RS00010	COG0357	Ribosomal RNA small subunit methyltransferase G
FYA69_RS00015	COG1192	Involved in chromosome partitioning
FYA69_RS00020	COG1475	DNA binding
FYA69_RS00025	COG0252	asparaginase activity
FYA69_RS00045	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYA69_RS00055	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYA69_RS00065	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FYA69_RS00070	COG0081	regulation of translation
FYA69_RS00075	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FYA69_RS00080	COG0222	ribosome binding
FYA69_RS00085	COG0085	RNA polymerase activity
FYA69_RS00090	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FYA69_RS00125	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FYA69_RS00130	COG0049	tRNA binding
FYA69_RS00135	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FYA69_RS00140	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYA69_RS00145	COG0051	transcription antitermination factor activity, RNA binding
FYA69_RS00150	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FYA69_RS00155	COG0088	Forms part of the polypeptide exit tunnel
FYA69_RS00160	COG0089	rRNA binding
FYA69_RS00165	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FYA69_RS00170	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FYA69_RS00175	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FYA69_RS00180	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FYA69_RS00185	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FYA69_RS00190	COG0255	Belongs to the universal ribosomal protein uL29 family
FYA69_RS00195	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FYA69_RS00205	COG4177	L-phenylalanine transmembrane transporter activity
FYA69_RS00215	COG1129	ABC transporter
FYA69_RS00220	COG0411	ABC transporter
FYA69_RS00250	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FYA69_RS00255	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FYA69_RS00260	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FYA69_RS00265	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FYA69_RS00270	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FYA69_RS00275	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FYA69_RS00280	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FYA69_RS00285	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FYA69_RS00290	COG1841	ribosomal large subunit assembly
FYA69_RS00295	COG0200	Binds to the 23S rRNA
FYA69_RS00300	COG0201	protein transport
FYA69_RS00305	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYA69_RS00310	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FYA69_RS00315	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FYA69_RS00320	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FYA69_RS00325	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FYA69_RS00330	COG0202	RNA polymerase activity
FYA69_RS00335	COG0203	ribosomal protein L17
FYA69_RS00340	COG0537	adenosine 5'-monophosphoramidase activity
FYA69_RS00345	COG1324	tolerance protein
FYA69_RS00350	COG4232	protein-disulfide reductase activity
FYA69_RS00365	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FYA69_RS00375	COG1333	cytochrome c biogenesis protein
FYA69_RS00380	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA69_RS00395	COG1965	Belongs to the frataxin family
FYA69_RS00405	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FYA69_RS00410	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FYA69_RS00415	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FYA69_RS00435	COG2814	Major facilitator Superfamily
FYA69_RS00460	COG2801	Transposase and inactivated derivatives
FYA69_RS00490	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYA69_RS00495	COG2922	Belongs to the Smg family
FYA69_RS00500	COG1629	transport
FYA69_RS00510	COG2358	TRAP transporter, solute receptor (TAXI family
FYA69_RS00520	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYA69_RS00535	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYA69_RS00540	COG0183	Belongs to the thiolase family
FYA69_RS00545	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS00570	COG2200	EAL domain
FYA69_RS00575	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA69_RS00585	COG0018	arginyl-trna synthetase
FYA69_RS00600	COG0154	amidase activity
FYA69_RS00605	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA69_RS00615	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FYA69_RS00625	COG0697	spore germination
FYA69_RS00685	COG3350	monooxygenase activity
FYA69_RS00710	COG1309	transcriptional regulator
FYA69_RS00740	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FYA69_RS00745	COG1280	lysine exporter protein (LysE YggA)
FYA69_RS00750	COG0513	Belongs to the DEAD box helicase family
FYA69_RS00760	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FYA69_RS00765	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FYA69_RS00795	COG2969	positive regulation of protein catabolic process
FYA69_RS00800	COG0625	glutathione transferase activity
FYA69_RS00805	COG2857	Cytochrome c1
FYA69_RS00810	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FYA69_RS00815	COG0723	plastoquinol--plastocyanin reductase activity
FYA69_RS00820	COG1970	mechanosensitive ion channel activity
FYA69_RS00825	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FYA69_RS00830	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA69_RS00840	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA69_RS00845	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA69_RS00855	COG0140	phosphoribosyl-ATP diphosphatase activity
FYA69_RS00860	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FYA69_RS00865	COG0107	imidazoleglycerol-phosphate synthase activity
FYA69_RS00870	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FYA69_RS00880	COG0131	Imidazoleglycerol-phosphate dehydratase
FYA69_RS00885	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FYA69_RS00890	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FYA69_RS00895	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FYA69_RS00900	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FYA69_RS00905	COG0271	Belongs to the BolA IbaG family
FYA69_RS00910	COG0842	Transport permease protein
FYA69_RS00915	COG1131	(ABC) transporter
FYA69_RS00930	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA69_RS00935	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYA69_RS00940	COG1127	ABC transporter
FYA69_RS00960	COG0067	glutamate synthase
FYA69_RS00960	COG0070	glutamate synthase
FYA69_RS00960	COG0069	glutamate synthase activity
FYA69_RS00985	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FYA69_RS01005	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA69_RS01010	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FYA69_RS01055	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA69_RS01090	COG0109	protoheme IX farnesyltransferase activity
FYA69_RS01095	COG1999	signal sequence binding
FYA69_RS01115	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FYA69_RS01120	COG2814	Major facilitator Superfamily
FYA69_RS01135	COG1522	sequence-specific DNA binding
FYA69_RS01200	COG4948	Mandelate Racemase Muconate Lactonizing
FYA69_RS01215	COG3119	arylsulfatase activity
FYA69_RS01250	COG0402	S-adenosylhomocysteine deaminase activity
FYA69_RS01260	COG1304	FMN binding
FYA69_RS01265	COG1254	Belongs to the acylphosphatase family
FYA69_RS01275	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS01285	COG1414	Transcriptional regulator
FYA69_RS01305	COG0028	Belongs to the TPP enzyme family
FYA69_RS01310	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FYA69_RS01315	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS01320	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS01355	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS01360	COG0583	DNA-binding transcription factor activity
FYA69_RS01375	COG0129	dihydroxy-acid dehydratase activity
FYA69_RS01380	COG2084	Dehydrogenase
FYA69_RS01395	COG1671	Belongs to the UPF0178 family
FYA69_RS01400	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA69_RS01410	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FYA69_RS01415	COG0443	Heat shock 70 kDa protein
FYA69_RS01440	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA69_RS01440	COG2169	Transcriptional regulator
FYA69_RS01455	COG1683	Conserved Protein
FYA69_RS01460	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA69_RS01475	COG1120	ATPase activity
FYA69_RS01480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA69_RS01485	COG4558	Periplasmic binding protein
FYA69_RS01490	COG3720	iron ion transport
FYA69_RS01500	COG3712	iron ion homeostasis
FYA69_RS01505	COG1595	DNA-templated transcription, initiation
FYA69_RS01525	COG1607	acyl-coa hydrolase
FYA69_RS01540	COG0437	4 iron, 4 sulfur cluster binding
FYA69_RS01545	COG2864	formate dehydrogenase
FYA69_RS01560	COG3276	selenocysteine insertion sequence binding
FYA69_RS01595	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FYA69_RS01600	COG0512	Glutamine amidotransferase of anthranilate synthase
FYA69_RS01610	COG0546	phosphoglycolate phosphatase activity
FYA69_RS01615	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYA69_RS01620	COG2967	ApaG domain
FYA69_RS01625	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FYA69_RS01630	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA69_RS01635	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA69_RS01640	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA69_RS01645	COG0037	tRNA processing
FYA69_RS01665	COG1024	Enoyl-CoA hydratase
FYA69_RS01680	COG0356	it plays a direct role in the translocation of protons across the membrane
FYA69_RS01690	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FYA69_RS01695	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FYA69_RS01700	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FYA69_RS01705	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FYA69_RS01710	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FYA69_RS01715	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FYA69_RS01730	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FYA69_RS01735	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FYA69_RS01740	COG0210	DNA helicase
FYA69_RS01755	COG4608	Belongs to the ABC transporter superfamily
FYA69_RS01760	COG0444	Belongs to the ABC transporter superfamily
FYA69_RS01765	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA69_RS01790	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FYA69_RS01795	COG1024	Enoyl-CoA hydratase
FYA69_RS01800	COG1024	Enoyl-CoA hydratase
FYA69_RS01805	COG2070	2-Nitropropane dioxygenase
FYA69_RS01820	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS01825	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA69_RS01845	COG2267	carboxylic ester hydrolase activity
FYA69_RS01865	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA69_RS01875	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA69_RS01875	COG2813	Specifically methylates the guanine in position
FYA69_RS01880	COG2223	nitrite transmembrane transporter activity
FYA69_RS01885	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA69_RS01900	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FYA69_RS01905	COG0708	Exodeoxyribonuclease III
FYA69_RS01910	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FYA69_RS01915	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FYA69_RS01920	COG0154	amidase activity
FYA69_RS01925	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FYA69_RS01930	COG1077	Cell shape determining protein MreB Mrl
FYA69_RS01935	COG1792	Involved in formation and maintenance of cell shape
FYA69_RS01945	COG0768	penicillin binding
FYA69_RS01950	COG0772	Belongs to the SEDS family
FYA69_RS01955	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA69_RS01960	COG0471	metal ion transport
FYA69_RS01965	COG1309	transcriptional regulator
FYA69_RS01975	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYA69_RS01990	COG2823	Periplasmic or secreted lipoprotein
FYA69_RS01995	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FYA69_RS02000	COG0792	nuclease activity
FYA69_RS02020	COG1660	Displays ATPase and GTPase activities
FYA69_RS02035	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FYA69_RS02045	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYA69_RS02055	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS02060	COG1473	amidohydrolase
FYA69_RS02065	COG1137	ATPase activity
FYA69_RS02080	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FYA69_RS02090	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FYA69_RS02110	COG1294	oxidase, subunit
FYA69_RS02120	COG4988	ABC transporter
FYA69_RS02125	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FYA69_RS02130	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FYA69_RS02145	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA69_RS02150	COG1238	metal cluster binding
FYA69_RS02160	COG1802	Transcriptional regulator
FYA69_RS02170	COG1984	allophanate hydrolase subunit 2
FYA69_RS02175	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FYA69_RS02185	COG0583	DNA-binding transcription factor activity
FYA69_RS02190	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA69_RS02195	COG5002	protein histidine kinase activity
FYA69_RS02200	COG0745	RESPONSE REGULATOR receiver
FYA69_RS02205	COG2226	methyltransferase
FYA69_RS02250	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYA69_RS02260	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS02280	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FYA69_RS02285	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYA69_RS02295	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FYA69_RS02315	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FYA69_RS02320	COG1538	Outer membrane efflux protein
FYA69_RS02330	COG0351	phosphomethylpyrimidine kinase
FYA69_RS02335	COG2022	thiamine diphosphate biosynthetic process
FYA69_RS02340	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA69_RS02360	COG2226	methyltransferase
FYA69_RS02370	COG1194	a g-specific adenine glycosylase
FYA69_RS02380	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FYA69_RS02385	COG2177	Part of the ABC transporter FtsEX involved in
FYA69_RS02390	COG2884	Cell division ATP-binding protein ftsE
FYA69_RS02395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA69_RS02400	COG4597	amino acid ABC transporter
FYA69_RS02405	COG0765	amino acid transport
FYA69_RS02410	COG1126	abc transporter atp-binding protein
FYA69_RS02440	COG0477	Major facilitator Superfamily
FYA69_RS02450	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FYA69_RS02455	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FYA69_RS02470	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FYA69_RS02475	COG0237	dephospho-CoA kinase activity
FYA69_RS02480	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FYA69_RS02490	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA69_RS02505	COG3539	Fimbrial protein
FYA69_RS02510	COG3539	Fimbrial protein
FYA69_RS02525	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FYA69_RS02535	COG1846	Transcriptional regulator
FYA69_RS02600	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS02605	COG1024	Enoyl-CoA hydratase
FYA69_RS02610	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS02640	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FYA69_RS02645	COG0352	thiamine-phosphate diphosphorylase activity
FYA69_RS02650	COG0351	phosphomethylpyrimidine kinase
FYA69_RS02660	COG1678	Uncharacterized ACR, COG1678
FYA69_RS02665	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FYA69_RS02690	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA69_RS02700	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYA69_RS02705	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FYA69_RS02715	COG0557	exoribonuclease II activity
FYA69_RS02725	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYA69_RS02730	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA69_RS02735	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FYA69_RS02745	COG0439	Biotin carboxylase
FYA69_RS02750	COG2264	protein methyltransferase activity
FYA69_RS02760	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA69_RS02785	COG1696	Membrane protein involved in D-alanine export
FYA69_RS02790	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYA69_RS02835	COG1522	sequence-specific DNA binding
FYA69_RS02850	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYA69_RS02915	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FYA69_RS02940	COG3028	Belongs to the UPF0307 family
FYA69_RS02945	COG0312	modulator of DNA gyrase
FYA69_RS02950	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FYA69_RS02955	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FYA69_RS02960	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FYA69_RS02970	COG0316	Belongs to the HesB IscA family
FYA69_RS02980	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FYA69_RS02990	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FYA69_RS02995	COG1881	PFAM PEBP family protein
FYA69_RS03000	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FYA69_RS03005	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FYA69_RS03020	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA69_RS03020	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA69_RS03035	COG2718	Belongs to the UPF0229 family
FYA69_RS03040	COG2719	SpoVR family
FYA69_RS03100	COG0165	Argininosuccinate lyase
FYA69_RS03105	COG0589	response to stress
FYA69_RS03115	COG2816	NAD+ diphosphatase activity
FYA69_RS03120	COG4993	Dehydrogenase
FYA69_RS03145	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS03150	COG2979	Protein of unknown function (DUF533)
FYA69_RS03155	COG4206	TonB-dependent receptor
FYA69_RS03170	COG0741	lytic transglycosylase activity
FYA69_RS03170	COG1388	LysM domain
FYA69_RS03175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYA69_RS03180	COG2226	methyltransferase
FYA69_RS03185	COG0328	RNA-DNA hybrid ribonuclease activity
FYA69_RS03210	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA69_RS03230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA69_RS03235	COG0842	Transport permease protein
FYA69_RS03235	COG1129	ABC transporter
FYA69_RS03240	COG0842	Transport permease protein
FYA69_RS03260	COG0463	Glycosyl transferase, family 2
FYA69_RS03265	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FYA69_RS03280	COG1073	alpha beta
FYA69_RS03290	COG0697	spore germination
FYA69_RS03295	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA69_RS03320	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FYA69_RS03350	COG0823	Involved in the tonB-independent uptake of proteins
FYA69_RS03360	COG0848	biopolymer transport protein
FYA69_RS03365	COG0811	peptide transport
FYA69_RS03370	COG0824	Thioesterase
FYA69_RS03375	COG0442	prolyl-tRNA aminoacylation
FYA69_RS03420	COG2084	Dehydrogenase
FYA69_RS03465	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FYA69_RS03470	COG4654	Cytochrome c, class I
FYA69_RS03475	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYA69_RS03530	COG2274	protein secretion by the type I secretion system
FYA69_RS03535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA69_RS03555	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FYA69_RS03570	COG0495	leucyl-tRNA aminoacylation
FYA69_RS03575	COG2814	Major facilitator Superfamily
FYA69_RS03580	COG1846	Transcriptional regulator
FYA69_RS03605	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FYA69_RS03610	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FYA69_RS03615	COG2814	Major facilitator Superfamily
FYA69_RS03620	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYA69_RS03640	COG4176	ABC-type proline glycine betaine transport system permease component
FYA69_RS03650	COG1942	4-Oxalocrotonate Tautomerase
FYA69_RS03675	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYA69_RS03675	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYA69_RS03685	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FYA69_RS03690	COG1845	cytochrome c oxidase, subunit III
FYA69_RS03700	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FYA69_RS03710	COG0428	transporter
FYA69_RS03715	COG0412	Dienelactone hydrolase
FYA69_RS03720	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA69_RS03725	COG1283	sodium-dependent phosphate transmembrane transporter activity
FYA69_RS03730	COG1760	l-serine dehydratase
FYA69_RS03735	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FYA69_RS03740	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FYA69_RS03750	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FYA69_RS03780	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA69_RS03795	COG0456	acetyltransferase
FYA69_RS03805	COG0662	Cupin 2, conserved barrel domain protein
FYA69_RS03810	COG5285	phytanoyl-CoA dioxygenase
FYA69_RS03815	COG0633	Ferredoxin
FYA69_RS03815	COG3217	Mosc domain protein beta barrel domain protein
FYA69_RS03820	COG2076	Multidrug Resistance protein
FYA69_RS03825	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FYA69_RS03830	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA69_RS03830	COG0543	2 iron, 2 sulfur cluster binding
FYA69_RS03835	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA69_RS03900	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FYA69_RS03905	COG0425	Belongs to the sulfur carrier protein TusA family
FYA69_RS03910	COG0228	four-way junction DNA binding
FYA69_RS03915	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FYA69_RS03920	COG0336	Belongs to the RNA methyltransferase TrmD family
FYA69_RS03930	COG0525	valine-tRNA ligase activity
FYA69_RS03935	COG0105	UTP biosynthetic process
FYA69_RS03940	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FYA69_RS03955	COG0124	histidyl-tRNA synthetase
FYA69_RS03960	COG2976	Protein conserved in bacteria
FYA69_RS03965	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA69_RS03970	COG1160	GTP binding
FYA69_RS03980	COG1923	regulation of RNA biosynthetic process
FYA69_RS03985	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FYA69_RS03990	COG0330	HflC and HflK could
FYA69_RS03995	COG0330	HflC and HflK could
FYA69_RS04030	COG1522	sequence-specific DNA binding
FYA69_RS04045	COG2239	Acts as a magnesium transporter
FYA69_RS04055	COG2855	membrane
FYA69_RS04060	COG0583	DNA-binding transcription factor activity
FYA69_RS04065	COG1473	amidohydrolase
FYA69_RS04070	COG0318	PFAM AMP-dependent synthetase and ligase
FYA69_RS04075	COG0483	inositol monophosphate 1-phosphatase activity
FYA69_RS04080	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA69_RS04080	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FYA69_RS04085	COG1501	Belongs to the glycosyl hydrolase 31 family
FYA69_RS04090	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FYA69_RS04095	COG2011	ABC-type metal ion transport system permease component
FYA69_RS04100	COG1464	Belongs to the NlpA lipoprotein family
FYA69_RS04150	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FYA69_RS04155	COG0156	8-amino-7-oxononanoate synthase activity
FYA69_RS04170	COG0402	S-adenosylhomocysteine deaminase activity
FYA69_RS04195	COG0727	PFAM Uncharacterised protein family (UPF0153)
FYA69_RS04200	COG2818	Glycosylase
FYA69_RS04205	COG2982	Protein involved in outer membrane biogenesis
FYA69_RS04210	COG2982	Protein involved in outer membrane biogenesis
FYA69_RS04245	COG2233	PERMEase
FYA69_RS04250	COG0326	Molecular chaperone. Has ATPase activity
FYA69_RS04260	COG4336	lyase activity
FYA69_RS04300	COG0625	glutathione transferase activity
FYA69_RS04320	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FYA69_RS04335	COG3842	ATPase activity
FYA69_RS04345	COG0583	DNA-binding transcription factor activity
FYA69_RS04350	COG0560	Phosphoserine phosphatase
FYA69_RS04375	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FYA69_RS04380	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS04385	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS04390	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS04395	COG0583	DNA-binding transcription factor activity
FYA69_RS04435	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS04445	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS04450	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS04470	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS04475	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS04480	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS04490	COG1024	Enoyl-CoA hydratase
FYA69_RS04500	COG0583	DNA-binding transcription factor activity
FYA69_RS04505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYA69_RS04510	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYA69_RS04510	COG0426	domain, Protein
FYA69_RS04545	COG0625	glutathione transferase activity
FYA69_RS04550	COG1408	metallophosphoesterase
FYA69_RS04555	COG0583	DNA-binding transcription factor activity
FYA69_RS04575	COG1024	Enoyl-CoA hydratase
FYA69_RS04580	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS04590	COG0583	DNA-binding transcription factor activity
FYA69_RS04600	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS04605	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA69_RS04610	COG3842	ATPase activity
FYA69_RS04635	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA69_RS04640	COG2084	Dehydrogenase
FYA69_RS04655	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
FYA69_RS04685	COG0745	RESPONSE REGULATOR receiver
FYA69_RS04700	COG3539	Fimbrial protein
FYA69_RS04725	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYA69_RS04725	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYA69_RS04735	COG0489	protein tyrosine kinase activity
FYA69_RS04750	COG0717	Belongs to the dCTP deaminase family
FYA69_RS04755	COG0456	acetyltransferase
FYA69_RS04770	COG2081	HI0933 family
FYA69_RS04775	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FYA69_RS04780	COG0509	glycine decarboxylation via glycine cleavage system
FYA69_RS04785	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FYA69_RS04785	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FYA69_RS04810	COG4172	Belongs to the ABC transporter superfamily
FYA69_RS04815	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA69_RS04825	COG0747	negative chemotaxis
FYA69_RS04840	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA69_RS04845	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA69_RS04855	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FYA69_RS04865	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
FYA69_RS04880	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYA69_RS04885	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FYA69_RS04900	COG0438	transferase activity, transferring glycosyl groups
FYA69_RS04915	COG0438	transferase activity, transferring glycosyl groups
FYA69_RS04920	COG0438	transferase activity, transferring glycosyl groups
FYA69_RS04925	COG0166	Belongs to the GPI family
FYA69_RS04940	COG0277	FAD linked oxidase domain protein
FYA69_RS04955	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS04965	COG2186	Transcriptional regulator
FYA69_RS04970	COG1368	sulfuric ester hydrolase activity
FYA69_RS04980	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FYA69_RS05005	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FYA69_RS05020	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FYA69_RS05030	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FYA69_RS05035	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FYA69_RS05040	COG0193	aminoacyl-tRNA hydrolase activity
FYA69_RS05050	COG0012	GTP binding
FYA69_RS05075	COG0583	DNA-binding transcription factor activity
FYA69_RS05085	COG2271	Major facilitator Superfamily
FYA69_RS05100	COG1802	Transcriptional regulator
FYA69_RS05120	COG0277	FAD linked oxidase domain protein
FYA69_RS05145	COG0583	DNA-binding transcription factor activity
FYA69_RS05155	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS05160	COG0318	PFAM AMP-dependent synthetase and ligase
FYA69_RS05170	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS05175	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA69_RS05180	COG1024	Enoyl-CoA hydratase
FYA69_RS05205	COG4774	siderophore transport
FYA69_RS05225	COG3135	benzoate transporter
FYA69_RS05230	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA69_RS05235	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FYA69_RS05240	COG0742	ribosomal rna small subunit methyltransferase
FYA69_RS05255	COG3639	organic phosphonate transmembrane transporter activity
FYA69_RS05260	COG3639	organic phosphonate transmembrane transporter activity
FYA69_RS05265	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FYA69_RS05275	COG1595	DNA-templated transcription, initiation
FYA69_RS05305	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FYA69_RS05310	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA69_RS05320	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FYA69_RS05330	COG0284	orotidine-5'-phosphate decarboxylase activity
FYA69_RS05335	COG1252	NADH dehydrogenase
FYA69_RS05340	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FYA69_RS05350	COG0459	protein refolding
FYA69_RS05355	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FYA69_RS05380	COG1982	Orn Lys Arg decarboxylase major
FYA69_RS05385	COG0531	amino acid
FYA69_RS05390	COG0583	DNA-binding transcription factor activity
FYA69_RS05430	COG1595	DNA-templated transcription, initiation
FYA69_RS05445	COG0668	transmembrane transport
FYA69_RS05450	COG0513	Belongs to the DEAD box helicase family
FYA69_RS05455	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS05480	COG1802	Transcriptional regulator
FYA69_RS05490	COG4566	intracellular signal transduction
FYA69_RS05495	COG4191	Histidine kinase
FYA69_RS05500	COG1064	alcohol dehydrogenase
FYA69_RS05510	COG1280	lysine exporter protein (LysE YggA)
FYA69_RS05520	COG1686	Belongs to the peptidase S11 family
FYA69_RS05525	COG1368	sulfuric ester hydrolase activity
FYA69_RS05530	COG0583	DNA-binding transcription factor activity
FYA69_RS05535	COG1215	transferase activity, transferring glycosyl groups
FYA69_RS05550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA69_RS05555	COG0444	Belongs to the ABC transporter superfamily
FYA69_RS05560	COG4608	Belongs to the ABC transporter superfamily
FYA69_RS05575	COG0488	(ABC) transporter
FYA69_RS05600	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FYA69_RS05605	COG2894	cell division
FYA69_RS05610	COG0850	regulation of cytokinetic process
FYA69_RS05615	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYA69_RS05625	COG1294	oxidase, subunit
FYA69_RS05645	COG0514	ATP-dependent DNA helicase (RecQ)
FYA69_RS05650	COG2255	four-way junction helicase activity
FYA69_RS05665	COG0632	four-way junction helicase activity
FYA69_RS05670	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FYA69_RS05700	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA69_RS05710	COG0006	proline dipeptidase activity
FYA69_RS05755	COG0429	hydrolase of the alpha beta-hydrolase fold
FYA69_RS05780	COG0513	Belongs to the DEAD box helicase family
FYA69_RS05800	COG1414	Transcriptional regulator
FYA69_RS05845	COG0167	dihydroorotate dehydrogenase activity
FYA69_RS05850	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FYA69_RS05855	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FYA69_RS05865	COG0583	DNA-binding transcription factor activity
FYA69_RS05895	COG0523	cobalamin synthesis protein
FYA69_RS05900	COG1335	isochorismatase
FYA69_RS05905	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FYA69_RS05910	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA69_RS05915	COG1802	Transcriptional regulator
FYA69_RS05920	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FYA69_RS05925	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS05940	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS05945	COG1280	lysine exporter protein (LysE YggA)
FYA69_RS05950	COG2828	Protein conserved in bacteria
FYA69_RS05995	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA69_RS06000	COG0735	belongs to the Fur family
FYA69_RS06030	COG0497	DNA recombination
FYA69_RS06035	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FYA69_RS06040	COG1420	regulation of RNA biosynthetic process
FYA69_RS06045	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FYA69_RS06055	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FYA69_RS06065	COG0443	Heat shock 70 kDa protein
FYA69_RS06075	COG0612	Peptidase, M16
FYA69_RS06095	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYA69_RS06130	COG0745	RESPONSE REGULATOR receiver
FYA69_RS06140	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FYA69_RS06145	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FYA69_RS06150	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FYA69_RS06165	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYA69_RS06180	COG1193	negative regulation of DNA recombination
FYA69_RS06185	COG0492	ferredoxin-NADP+ reductase activity
FYA69_RS06190	COG1674	ftsk spoiiie
FYA69_RS06195	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FYA69_RS06200	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FYA69_RS06205	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FYA69_RS06245	COG3468	outer membrane autotransporter barrel domain protein
FYA69_RS06265	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS06270	COG1024	Enoyl-CoA hydratase
FYA69_RS06295	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA69_RS06300	COG0501	Belongs to the peptidase M48B family
FYA69_RS06310	COG0789	Transcriptional regulator
FYA69_RS06320	COG0165	Argininosuccinate lyase
FYA69_RS06325	COG0668	transmembrane transport
FYA69_RS06330	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA69_RS06330	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FYA69_RS06360	COG0604	alcohol dehydrogenase
FYA69_RS06360	COG3321	synthase
FYA69_RS06360	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYA69_RS06360	COG4221	oxidoreductase activity
FYA69_RS06365	COG0149	triose-phosphate isomerase activity
FYA69_RS06375	COG0438	transferase activity, transferring glycosyl groups
FYA69_RS06380	COG4607	ABC-type enterochelin transport system periplasmic component
FYA69_RS06385	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA69_RS06390	COG4605	iron ion homeostasis
FYA69_RS06395	COG4604	ABC transporter, ATP-binding protein
FYA69_RS06415	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA69_RS06430	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS06465	COG1595	DNA-templated transcription, initiation
FYA69_RS06490	COG2186	Transcriptional regulator
FYA69_RS06495	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS06500	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS06520	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
FYA69_RS06525	COG2200	EAL domain
FYA69_RS06525	COG2199	diguanylate cyclase activity
FYA69_RS06525	COG2202	Pas domain
FYA69_RS06600	COG2271	Major facilitator Superfamily
FYA69_RS06610	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA69_RS06620	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA69_RS06640	COG2321	neutral zinc metallopeptidase
FYA69_RS06645	COG0009	L-threonylcarbamoyladenylate synthase
FYA69_RS06650	COG1994	Peptidase M50
FYA69_RS06655	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA69_RS06660	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FYA69_RS06670	COG2850	peptidyl-arginine hydroxylation
FYA69_RS06675	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FYA69_RS06695	COG3360	Dodecin
FYA69_RS06715	COG1802	Transcriptional regulator
FYA69_RS06730	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FYA69_RS06740	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA69_RS06765	COG0668	transmembrane transport
FYA69_RS06785	COG0483	inositol monophosphate 1-phosphatase activity
FYA69_RS06790	COG1253	flavin adenine dinucleotide binding
FYA69_RS06795	COG1968	undecaprenyl-diphosphatase activity
FYA69_RS06800	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYA69_RS06805	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FYA69_RS06815	COG0215	cysteine-tRNA ligase activity
FYA69_RS06825	COG0825	malonyl-CoA metabolic process
FYA69_RS06830	COG0037	tRNA processing
FYA69_RS06850	COG2814	Major facilitator Superfamily
FYA69_RS06855	COG4772	TonB-dependent receptor
FYA69_RS06865	COG4993	Dehydrogenase
FYA69_RS06880	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FYA69_RS06885	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FYA69_RS06890	COG1121	(ABC) transporter
FYA69_RS06895	COG0803	Belongs to the bacterial solute-binding protein 9 family
FYA69_RS06910	COG0500	methyltransferase
FYA69_RS06935	COG2204	response regulator
FYA69_RS06940	COG4191	Histidine kinase
FYA69_RS06950	COG0424	maF-like protein
FYA69_RS06955	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FYA69_RS06960	COG0799	negative regulation of ribosome biogenesis
FYA69_RS06965	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FYA69_RS06975	COG0151	Belongs to the GarS family
FYA69_RS06980	COG0217	transcriptional regulatory protein
FYA69_RS06985	COG0433	COG0433 Predicted ATPase
FYA69_RS06995	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA69_RS07000	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA69_RS07025	COG2814	Major facilitator Superfamily
FYA69_RS07030	COG1566	PFAM secretion protein HlyD family protein
FYA69_RS07040	COG1846	Transcriptional regulator
FYA69_RS07075	COG1530	ribonuclease E activity
FYA69_RS07135	COG2433	Pfam Transposase IS66
FYA69_RS07165	COG1278	Cold shock
FYA69_RS07175	COG2801	Transposase and inactivated derivatives
FYA69_RS07220	COG0544	peptidyl-prolyl cis-trans isomerase activity
FYA69_RS07225	COG0740	serine-type endopeptidase activity
FYA69_RS07235	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYA69_RS07250	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FYA69_RS07290	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA69_RS07310	COG0583	DNA-binding transcription factor activity
FYA69_RS07325	COG0556	nucleotide-excision repair
FYA69_RS07330	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYA69_RS07340	COG1104	cysteine desulfurase activity
FYA69_RS07345	COG0822	iron-sulfur transferase activity
FYA69_RS07350	COG0316	Belongs to the HesB IscA family
FYA69_RS07355	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FYA69_RS07360	COG0443	Heat shock 70 kDa protein
FYA69_RS07365	COG0633	Ferredoxin
FYA69_RS07370	COG2975	iron-sulfur cluster assembly
FYA69_RS07395	COG2801	Transposase and inactivated derivatives
FYA69_RS07400	COG2801	Transposase and inactivated derivatives
FYA69_RS07420	COG1803	Methylglyoxal synthase
FYA69_RS07430	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FYA69_RS07435	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS07445	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FYA69_RS07460	COG1136	(ABC) transporter
FYA69_RS07465	COG0084	hydrolase, TatD family'
FYA69_RS07475	COG3712	iron ion homeostasis
FYA69_RS07480	COG1595	DNA-templated transcription, initiation
FYA69_RS07510	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS07520	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS07530	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYA69_RS07550	COG0583	DNA-binding transcription factor activity
FYA69_RS07560	COG1012	belongs to the aldehyde dehydrogenase family
FYA69_RS07620	COG0613	PHP domain protein
FYA69_RS07630	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA69_RS07635	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA69_RS07635	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA69_RS07655	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA69_RS07660	COG0047	phosphoribosylformylglycinamidine synthase activity
FYA69_RS07660	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FYA69_RS07700	COG0747	negative chemotaxis
FYA69_RS07705	COG4608	Belongs to the ABC transporter superfamily
FYA69_RS07715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA69_RS07735	COG0601	transmembrane transport
FYA69_RS07740	COG2072	flavoprotein involved in K transport
FYA69_RS07755	COG1695	Transcriptional regulator
FYA69_RS07770	COG0519	Catalyzes the synthesis of GMP from XMP
FYA69_RS07770	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FYA69_RS07780	COG3177	Filamentation induced by cAMP protein fic
FYA69_RS07815	COG1733	regulation of RNA biosynthetic process
FYA69_RS07820	COG0384	phenazine biosynthesis protein PhzF
FYA69_RS07845	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA69_RS07870	COG0583	DNA-binding transcription factor activity
FYA69_RS07905	COG1012	belongs to the aldehyde dehydrogenase family
FYA69_RS07920	COG2814	Major facilitator Superfamily
FYA69_RS07925	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA69_RS07930	COG2207	Transcriptional regulator
FYA69_RS07935	COG2807	transmembrane transport
FYA69_RS07960	COG2814	Major facilitator Superfamily
FYA69_RS07965	COG0583	DNA-binding transcription factor activity
FYA69_RS07990	COG1396	sequence-specific DNA binding
FYA69_RS08025	COG5507	3-demethylubiquinone-9 3-methyltransferase
FYA69_RS08050	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA69_RS08105	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
FYA69_RS08110	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FYA69_RS08115	COG0390	transport system, permease component
FYA69_RS08125	COG0587	DNA-directed DNA polymerase activity
FYA69_RS08160	COG0720	synthase
FYA69_RS08165	COG0602	queuosine metabolic process
FYA69_RS08200	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYA69_RS08210	COG0842	Transport permease protein
FYA69_RS08215	COG1131	(ABC) transporter
FYA69_RS08225	COG1309	transcriptional regulator
FYA69_RS08230	COG2130	NADP-dependent
FYA69_RS08240	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FYA69_RS08250	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FYA69_RS08285	COG0420	3'-5' exonuclease activity
FYA69_RS08310	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS08315	COG2111	Na H antiporter
FYA69_RS08315	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYA69_RS08320	COG1006	Multisubunit Na H antiporter MnhC subunit
FYA69_RS08325	COG0651	ATP synthesis coupled electron transport
FYA69_RS08330	COG1863	multisubunit Na H antiporter MnhE subunit
FYA69_RS08335	COG2212	antiporter activity
FYA69_RS08340	COG1320	monovalent cation:proton antiporter activity
FYA69_RS08355	COG0590	tRNA wobble adenosine to inosine editing
FYA69_RS08360	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYA69_RS08365	COG0488	(ABC) transporter
FYA69_RS08400	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA69_RS08405	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYA69_RS08410	COG2252	PERMEase
FYA69_RS08415	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FYA69_RS08420	COG0583	DNA-binding transcription factor activity
FYA69_RS08445	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FYA69_RS08455	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYA69_RS08490	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FYA69_RS08495	COG0789	Transcriptional regulator
FYA69_RS08500	COG2217	Heavy metal translocating P-type atpase
FYA69_RS08510	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA69_RS08510	COG0678	peroxiredoxin activity
FYA69_RS08520	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FYA69_RS08525	COG0584	glycerophosphoryl diester phosphodiesterase
FYA69_RS08530	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA69_RS08540	COG4181	ATPase activity
FYA69_RS08550	COG3064	Membrane
FYA69_RS08550	COG3210	domain, Protein
FYA69_RS08550	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA69_RS08565	COG3121	Chaperone
FYA69_RS08570	COG3188	usher protein
FYA69_RS08580	COG2831	hemolysin activation secretion protein
FYA69_RS08590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA69_RS08595	COG0765	amino acid transport
FYA69_RS08600	COG1126	abc transporter atp-binding protein
FYA69_RS08605	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYA69_RS08610	COG1758	RNA polymerase activity
FYA69_RS08615	COG0194	GDP metabolic process
FYA69_RS08620	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS08625	COG0791	NLP P60 protein
FYA69_RS08630	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYA69_RS08640	COG1561	YicC-like family, N-terminal region
FYA69_RS08645	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FYA69_RS08655	COG2079	MmgE PrpD family protein
FYA69_RS08660	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS08665	COG0583	DNA-binding transcription factor activity
FYA69_RS08675	COG0840	transmembrane signaling receptor activity
FYA69_RS08685	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FYA69_RS08690	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA69_RS08695	COG0174	glutamine synthetase
FYA69_RS08710	COG0583	DNA-binding transcription factor activity
FYA69_RS08715	COG1741	Belongs to the pirin family
FYA69_RS08720	COG1741	Belongs to the pirin family
FYA69_RS08725	COG3842	ATPase activity
FYA69_RS08735	COG1840	ABC-type Fe3 transport system, periplasmic component
FYA69_RS08765	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FYA69_RS08770	COG0583	DNA-binding transcription factor activity
FYA69_RS08775	COG0783	Belongs to the Dps family
FYA69_RS08790	COG0463	Glycosyl transferase, family 2
FYA69_RS08815	COG0438	transferase activity, transferring glycosyl groups
FYA69_RS08830	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FYA69_RS08855	COG3842	ATPase activity
FYA69_RS08860	COG0395	ABC-type sugar transport system, permease component
FYA69_RS08865	COG1175	transmembrane transport
FYA69_RS08880	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FYA69_RS08890	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA69_RS08910	COG1794	racemase activity, acting on amino acids and derivatives
FYA69_RS08920	COG0625	glutathione transferase activity
FYA69_RS08925	COG2133	pyrroloquinoline quinone binding
FYA69_RS08930	COG0697	spore germination
FYA69_RS08950	COG1464	Belongs to the NlpA lipoprotein family
FYA69_RS08955	COG1304	FMN binding
FYA69_RS08960	COG0688	phosphatidylethanolamine metabolic process
FYA69_RS08970	COG1012	belongs to the aldehyde dehydrogenase family
FYA69_RS08980	COG0028	Belongs to the TPP enzyme family
FYA69_RS08990	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA69_RS08990	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA69_RS09000	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA69_RS09010	COG3189	MarR family transcriptional regulator
FYA69_RS09015	COG2985	domain, Protein
FYA69_RS09020	COG0076	glutamate decarboxylase activity
FYA69_RS09045	COG2205	protein histidine kinase activity
FYA69_RS09045	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA69_RS09050	COG2197	response regulator
FYA69_RS09055	COG2203	Gaf domain
FYA69_RS09055	COG3706	GGDEF domain
FYA69_RS09055	COG4251	negative regulation of phosphorylation
FYA69_RS09055	COG5001	Diguanylate cyclase
FYA69_RS09060	COG1253	flavin adenine dinucleotide binding
FYA69_RS09080	COG2200	EAL domain
FYA69_RS09125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA69_RS09130	COG0765	amino acid transport
FYA69_RS09135	COG1126	abc transporter atp-binding protein
FYA69_RS09160	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYA69_RS09170	COG2199	diguanylate cyclase activity
FYA69_RS09170	COG2203	Gaf domain
FYA69_RS09205	COG1191	sigma factor activity
FYA69_RS09225	COG0840	transmembrane signaling receptor activity
FYA69_RS09230	COG0840	transmembrane signaling receptor activity
FYA69_RS09255	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA69_RS09265	COG1580	Controls the rotational direction of flagella during chemotaxis
FYA69_RS09285	COG1317	bacterial-type flagellum organization
FYA69_RS09290	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA69_RS09300	COG1677	Flagellar hook-basal body complex protein FliE
FYA69_RS09310	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYA69_RS09350	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS09355	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS09365	COG0285	dihydrofolate synthase activity
FYA69_RS09375	COG1286	toxin biosynthetic process
FYA69_RS09395	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FYA69_RS09400	COG0024	Methionine aminopeptidase
FYA69_RS09405	COG0052	Belongs to the universal ribosomal protein uS2 family
FYA69_RS09410	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FYA69_RS09415	COG0528	UMP kinase activity
FYA69_RS09420	COG0233	cytoplasmic translational termination
FYA69_RS09425	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYA69_RS09435	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FYA69_RS09440	COG0750	zinc metalloprotease
FYA69_RS09445	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA69_RS09455	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYA69_RS09460	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FYA69_RS09470	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYA69_RS09475	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FYA69_RS09480	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA69_RS09490	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FYA69_RS09500	COG0519	Catalyzes the synthesis of GMP from XMP
FYA69_RS09500	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FYA69_RS09535	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FYA69_RS09545	COG2914	Belongs to the UPF0125 (RnfH) family
FYA69_RS09555	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS09560	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FYA69_RS09585	COG0583	DNA-binding transcription factor activity
FYA69_RS09590	COG2175	clavaminate synthase activity
FYA69_RS09600	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FYA69_RS09605	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA69_RS09615	COG0084	hydrolase, TatD family'
FYA69_RS09630	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA69_RS09635	COG0765	amino acid transport
FYA69_RS09645	COG0010	Belongs to the arginase family
FYA69_RS09655	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FYA69_RS09665	COG0095	Lipoate-protein ligase
FYA69_RS09680	COG0386	Belongs to the glutathione peroxidase family
FYA69_RS09700	COG0415	Belongs to the DNA photolyase family
FYA69_RS09730	COG2259	Doxx family
FYA69_RS09740	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS09750	COG0842	Transport permease protein
FYA69_RS09755	COG0842	Transport permease protein
FYA69_RS09755	COG1129	ABC transporter
FYA69_RS09760	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA69_RS09780	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FYA69_RS09805	COG2733	membrane
FYA69_RS09840	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYA69_RS09870	COG2814	Major facilitator Superfamily
FYA69_RS09900	COG3486	L-lysine 6-monooxygenase (NADPH) activity
FYA69_RS09915	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS09925	COG3022	response to hydroperoxide
FYA69_RS09950	COG0028	Belongs to the TPP enzyme family
FYA69_RS09955	COG0440	acetolactate synthase activity
FYA69_RS09965	COG1183	phosphatidylcholine synthase activity
FYA69_RS09980	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FYA69_RS09985	COG1185	polyribonucleotide nucleotidyltransferase activity
FYA69_RS10015	COG0583	DNA-binding transcription factor activity
FYA69_RS10030	COG1129	ABC transporter
FYA69_RS10070	COG1280	lysine exporter protein (LysE YggA)
FYA69_RS10085	COG3161	chorismate lyase activity
FYA69_RS10090	COG1187	pseudouridine synthase activity
FYA69_RS10095	COG0583	DNA-binding transcription factor activity
FYA69_RS10100	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA69_RS10120	COG1999	signal sequence binding
FYA69_RS10140	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FYA69_RS10145	COG4566	intracellular signal transduction
FYA69_RS10160	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FYA69_RS10165	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA69_RS10170	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA69_RS10185	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA69_RS10190	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA69_RS10200	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS10205	COG0583	DNA-binding transcription factor activity
FYA69_RS10210	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FYA69_RS10235	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYA69_RS10255	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA69_RS10270	COG2900	Belongs to the SlyX family
FYA69_RS10275	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA69_RS10300	COG2814	Major facilitator Superfamily
FYA69_RS10340	COG2801	Transposase and inactivated derivatives
FYA69_RS10395	COG2171	N-acyltransferase activity
FYA69_RS10400	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYA69_RS10405	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA69_RS10410	COG0488	(ABC) transporter
FYA69_RS10415	COG4771	TonB-dependent receptor
FYA69_RS10420	COG0210	DNA helicase
FYA69_RS10450	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FYA69_RS10450	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA69_RS10460	COG0196	riboflavin kinase activity
FYA69_RS10465	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FYA69_RS10470	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FYA69_RS10475	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FYA69_RS10495	COG1522	sequence-specific DNA binding
FYA69_RS10525	COG0756	dUTP diphosphatase activity
FYA69_RS10535	COG0765	amino acid transport
FYA69_RS10540	COG0765	amino acid transport
FYA69_RS10545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA69_RS10560	COG1764	response to oxidative stress
FYA69_RS10570	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA69_RS10575	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA69_RS10590	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FYA69_RS10595	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FYA69_RS10600	COG2197	response regulator
FYA69_RS10605	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA69_RS10645	COG2801	Transposase and inactivated derivatives
FYA69_RS10650	COG2801	Transposase and inactivated derivatives
FYA69_RS10670	COG0135	phosphoribosylanthranilate isomerase activity
FYA69_RS10675	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA69_RS10680	COG0101	tRNA pseudouridine synthase activity
FYA69_RS10690	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FYA69_RS10695	COG0473	3-isopropylmalate dehydrogenase activity
FYA69_RS10705	COG0066	3-isopropylmalate dehydratase activity
FYA69_RS10730	COG2197	response regulator
FYA69_RS10735	COG0501	Belongs to the peptidase M48B family
FYA69_RS10740	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FYA69_RS10760	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FYA69_RS10770	COG1295	ribonuclease BN
FYA69_RS10780	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA69_RS10830	COG1450	Type ii and iii secretion system protein
FYA69_RS10880	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYA69_RS10920	COG0181	hydroxymethylbilane synthase activity
FYA69_RS10925	COG0861	Integral membrane protein TerC family
FYA69_RS10930	COG0861	Integral membrane protein TerC family
FYA69_RS10935	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA69_RS10940	COG0045	succinate-CoA ligase (ADP-forming) activity
FYA69_RS10960	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FYA69_RS10970	COG2137	regulation of response to DNA damage stimulus
FYA69_RS10975	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FYA69_RS11000	COG2974	May be involved in recombination
FYA69_RS11005	COG0540	Belongs to the ATCase OTCase family
FYA69_RS11035	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA69_RS11095	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FYA69_RS11115	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FYA69_RS11130	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FYA69_RS11140	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYA69_RS11145	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FYA69_RS11155	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA69_RS11165	COG3620	sequence-specific DNA binding
FYA69_RS11170	COG2233	PERMEase
FYA69_RS11200	COG0406	alpha-ribazole phosphatase activity
FYA69_RS11205	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS11215	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FYA69_RS11220	COG0505	Belongs to the CarA family
FYA69_RS11225	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA69_RS11230	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA69_RS11250	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FYA69_RS11255	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FYA69_RS11260	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FYA69_RS11290	COG1686	Belongs to the peptidase S11 family
FYA69_RS11295	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYA69_RS11300	COG4974	Belongs to the 'phage' integrase family
FYA69_RS11305	COG0583	DNA-binding transcription factor activity
FYA69_RS11310	COG0028	Belongs to the TPP enzyme family
FYA69_RS11315	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS11345	COG4771	TonB-dependent receptor
FYA69_RS11355	COG0009	L-threonylcarbamoyladenylate synthase
FYA69_RS11360	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FYA69_RS11365	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FYA69_RS11370	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FYA69_RS11380	COG1301	dicarboxylic acid transport
FYA69_RS11385	COG0456	acetyltransferase
FYA69_RS11425	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYA69_RS11435	COG0739	heme binding
FYA69_RS11445	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA69_RS11450	COG0306	phosphate transporter
FYA69_RS11465	COG0789	Transcriptional regulator
FYA69_RS11485	COG0625	glutathione transferase activity
FYA69_RS11500	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYA69_RS11520	COG0126	phosphoglycerate kinase activity
FYA69_RS11525	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYA69_RS11530	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYA69_RS11535	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FYA69_RS11550	COG0280	phosphate acetyltransferase
FYA69_RS11550	COG0281	malic enzyme
FYA69_RS11560	COG0436	Aminotransferase
FYA69_RS11565	COG0741	lytic transglycosylase activity
FYA69_RS11570	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FYA69_RS11595	COG4575	ribosome binding
FYA69_RS11605	COG1648	precorrin-2 dehydrogenase activity
FYA69_RS11605	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FYA69_RS11610	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FYA69_RS11615	COG2027	D-alanyl-D-alanine carboxypeptidase
FYA69_RS11620	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FYA69_RS11625	COG0343	queuine tRNA-ribosyltransferase activity
FYA69_RS11630	COG1862	Preprotein translocase
FYA69_RS11635	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA69_RS11640	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA69_RS11660	COG0667	Aldo Keto reductase
FYA69_RS11665	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FYA69_RS11670	COG4535	Mg2 and Co2 transporter CorC
FYA69_RS11675	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FYA69_RS11680	COG1702	phosphate starvation-inducible protein PhoH
FYA69_RS11685	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FYA69_RS11710	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FYA69_RS11715	COG0697	spore germination
FYA69_RS11725	COG0494	nUDIX hydrolase
FYA69_RS11740	COG3530	Putative quorum-sensing-regulated virulence factor
FYA69_RS11750	COG3015	lipoprotein NlpE involved in copper resistance
FYA69_RS11770	COG2814	Major facilitator Superfamily
FYA69_RS11780	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
FYA69_RS11805	COG0628	permease
FYA69_RS11815	COG1131	(ABC) transporter
FYA69_RS11820	COG1764	response to oxidative stress
FYA69_RS11825	COG1846	Transcriptional regulator
FYA69_RS11830	COG2224	Isocitrate lyase
FYA69_RS11835	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FYA69_RS11835	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FYA69_RS11845	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FYA69_RS11850	COG0322	excinuclease ABC activity
FYA69_RS11855	COG1472	Belongs to the glycosyl hydrolase 3 family
FYA69_RS11860	COG0736	holo-[acyl-carrier-protein] synthase activity
FYA69_RS11865	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FYA69_RS11875	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA69_RS11880	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA69_RS11885	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA69_RS11915	COG4149	molybdate abc transporter
FYA69_RS11920	COG0725	ABC transporter, periplasmic molybdate-binding protein
FYA69_RS11925	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FYA69_RS11930	COG4120	Belongs to the binding-protein-dependent transport system permease family
FYA69_RS11945	COG2032	superoxide dismutase activity
FYA69_RS11955	COG0318	PFAM AMP-dependent synthetase and ligase
FYA69_RS11960	COG1024	Enoyl-CoA hydratase
FYA69_RS11970	COG1802	Transcriptional regulator
FYA69_RS11985	COG1217	gtp-binding protein TYPA
FYA69_RS11990	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FYA69_RS11995	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FYA69_RS12000	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FYA69_RS12005	COG2251	uridine kinase activity
FYA69_RS12005	COG0195	Participates in both transcription termination and antitermination
FYA69_RS12010	COG0779	Required for maturation of 30S ribosomal subunits
FYA69_RS12015	COG1187	pseudouridine synthase activity
FYA69_RS12020	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FYA69_RS12030	COG0583	DNA-binding transcription factor activity
FYA69_RS12040	COG0523	cobalamin synthesis protein
FYA69_RS12060	COG0625	glutathione transferase activity
FYA69_RS12065	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FYA69_RS12075	COG2003	Belongs to the UPF0758 family
FYA69_RS12080	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FYA69_RS12085	COG3483	tryptophan 2,3-dioxygenase activity
FYA69_RS12090	COG0254	rRNA binding
FYA69_RS12130	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA69_RS12135	COG1562	ergosterol biosynthetic process
FYA69_RS12140	COG1562	ergosterol biosynthetic process
FYA69_RS12145	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
FYA69_RS12145	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
FYA69_RS12150	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FYA69_RS12175	COG1477	protein flavinylation
FYA69_RS12190	COG0542	response to heat
FYA69_RS12200	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA69_RS12215	COG0678	peroxiredoxin activity
FYA69_RS12225	COG0412	Dienelactone hydrolase
FYA69_RS12230	COG0315	cyclic pyranopterin monophosphate synthase activity
FYA69_RS12240	COG0314	molybdopterin synthase activity
FYA69_RS12245	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA69_RS12250	COG0303	'Molybdopterin
FYA69_RS12255	COG0746	molybdenum cofactor guanylyltransferase activity
FYA69_RS12260	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FYA69_RS12295	COG2264	protein methyltransferase activity
FYA69_RS12320	COG5006	permease, DMT superfamily
FYA69_RS12325	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS12350	COG1666	GTP binding
FYA69_RS12395	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FYA69_RS12400	COG1845	cytochrome c oxidase, subunit III
FYA69_RS12405	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA69_RS12415	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FYA69_RS12435	COG0783	Belongs to the Dps family
FYA69_RS12440	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS12450	COG1346	cytolysis
FYA69_RS12470	COG4172	Belongs to the ABC transporter superfamily
FYA69_RS12475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA69_RS12480	COG0601	transmembrane transport
FYA69_RS12485	COG0747	negative chemotaxis
FYA69_RS12495	COG0598	Magnesium transport protein CorA
FYA69_RS12500	COG0210	DNA helicase
FYA69_RS12515	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA69_RS12520	COG1012	belongs to the aldehyde dehydrogenase family
FYA69_RS12525	COG0483	inositol monophosphate 1-phosphatase activity
FYA69_RS12530	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FYA69_RS12540	COG1045	serine acetyltransferase
FYA69_RS12550	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS12555	COG0183	Belongs to the thiolase family
FYA69_RS12560	COG1024	Enoyl-CoA hydratase
FYA69_RS12560	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA69_RS12570	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA69_RS12570	COG1024	Enoyl-CoA hydratase
FYA69_RS12575	COG0183	Belongs to the thiolase family
FYA69_RS12590	COG0318	PFAM AMP-dependent synthetase and ligase
FYA69_RS12610	COG3246	L-lysine catabolic process to acetate
FYA69_RS12615	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA69_RS12630	COG1610	YqeY-like protein
FYA69_RS12675	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA69_RS12690	COG0667	Aldo Keto reductase
FYA69_RS12695	COG0656	L-ascorbic acid biosynthetic process
FYA69_RS12715	COG5265	(ABC) transporter
FYA69_RS12765	COG1522	sequence-specific DNA binding
FYA69_RS12785	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FYA69_RS12795	COG1278	Cold shock
FYA69_RS12815	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS12820	COG1802	Transcriptional regulator
FYA69_RS12850	COG0776	regulation of translation
FYA69_RS12855	COG0072	phenylalanine-tRNA ligase activity
FYA69_RS12855	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYA69_RS12860	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FYA69_RS12865	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FYA69_RS12870	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FYA69_RS12915	COG0347	Belongs to the P(II) protein family
FYA69_RS12920	COG0004	ammonium transporteR
FYA69_RS12950	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA69_RS12950	COG0506	proline dehydrogenase activity
FYA69_RS12950	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA69_RS12960	COG3008	intermembrane lipid transfer
FYA69_RS12975	COG4953	penicillin-binding protein 1C
FYA69_RS12985	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FYA69_RS12990	COG1278	Cold shock
FYA69_RS13000	COG0183	Belongs to the thiolase family
FYA69_RS13005	COG0038	chloride channel
FYA69_RS13015	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA69_RS13020	COG1570	exodeoxyribonuclease VII activity
FYA69_RS13025	COG0811	peptide transport
FYA69_RS13030	COG0848	biopolymer transport protein
FYA69_RS13035	COG1663	tetraacyldisaccharide 4'-kinase activity
FYA69_RS13040	COG2835	tetraacyldisaccharide 4'-kinase activity
FYA69_RS13045	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FYA69_RS13050	COG0563	adenylate kinase activity
FYA69_RS13060	COG0728	peptidoglycan biosynthetic process
FYA69_RS13105	COG0268	Binds directly to 16S ribosomal RNA
FYA69_RS13110	COG3836	Belongs to the HpcH HpaI aldolase family
FYA69_RS13140	COG2186	Transcriptional regulator
FYA69_RS13155	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYA69_RS13165	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYA69_RS13170	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA69_RS13175	COG0137	argininosuccinate synthase activity
FYA69_RS13200	COG3158	transport of potassium into the cell
FYA69_RS13205	COG0642	Histidine kinase
FYA69_RS13235	COG0776	regulation of translation
FYA69_RS13240	COG2873	o-acetylhomoserine
FYA69_RS13245	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA69_RS13250	COG0557	exoribonuclease II activity
FYA69_RS13270	COG2153	protein acetylation
FYA69_RS13275	COG0679	Auxin Efflux Carrier
FYA69_RS13280	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FYA69_RS13285	COG2391	methyltransferase activity
FYA69_RS13290	COG0069	glutamate synthase activity
FYA69_RS13315	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
FYA69_RS13335	COG2826	transposase and inactivated derivatives, IS30 family
FYA69_RS13350	COG3706	GGDEF domain
FYA69_RS13385	COG3909	cytochrome
FYA69_RS13390	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FYA69_RS13395	COG0625	glutathione transferase activity
FYA69_RS13400	COG0730	response to heat
FYA69_RS13405	COG0482	sulfurtransferase activity
FYA69_RS13410	COG0583	DNA-binding transcription factor activity
FYA69_RS13450	COG0247	lactate metabolic process
FYA69_RS13455	COG0277	FAD linked oxidase domain protein
FYA69_RS13460	COG0277	FAD linked oxidase domain protein
FYA69_RS13480	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA69_RS13485	COG0312	modulator of DNA gyrase
FYA69_RS13500	COG0308	aminopeptidase N
FYA69_RS13505	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FYA69_RS13530	COG0436	Aminotransferase
FYA69_RS13535	COG3737	Protein of unknown function (DUF498/DUF598)
FYA69_RS13540	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FYA69_RS13545	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FYA69_RS13550	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FYA69_RS13560	COG0305	Participates in initiation and elongation during chromosome replication
FYA69_RS13570	COG0359	binds to the 23S rRNA
FYA69_RS13575	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FYA69_RS13580	COG2965	DNA replication, synthesis of RNA primer
FYA69_RS13585	COG0360	Binds together with S18 to 16S ribosomal RNA
FYA69_RS13590	COG1469	GTP cyclohydrolase I activity
FYA69_RS13595	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FYA69_RS13600	COG0142	geranyltranstransferase activity
FYA69_RS13605	COG1722	exodeoxyribonuclease VII activity
FYA69_RS13650	COG0501	Belongs to the peptidase M48B family
FYA69_RS13670	COG1132	(ABC) transporter
FYA69_RS13705	COG0463	Glycosyl transferase, family 2
FYA69_RS13710	COG0726	polysaccharide deacetylase
FYA69_RS13715	COG0438	transferase activity, transferring glycosyl groups
FYA69_RS13730	COG1643	Atp-dependent helicase
FYA69_RS13735	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYA69_RS13735	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FYA69_RS13740	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FYA69_RS13745	COG0704	Plays a role in the regulation of phosphate uptake
FYA69_RS13750	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FYA69_RS13760	COG1322	Protein conserved in bacteria
FYA69_RS13780	COG1177	transmembrane transport
FYA69_RS13785	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA69_RS13790	COG3842	ATPase activity
FYA69_RS13800	COG3642	lipopolysaccharide core region biosynthetic process
FYA69_RS13805	COG2346	COG2346, Truncated hemoglobins
FYA69_RS13810	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FYA69_RS13815	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA69_RS13825	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA69_RS13825	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA69_RS13855	COG2050	protein possibly involved in aromatic compounds catabolism
FYA69_RS13860	COG1024	Enoyl-CoA hydratase
FYA69_RS13865	COG1012	belongs to the aldehyde dehydrogenase family
FYA69_RS13870	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA69_RS13875	COG2151	metal-sulfur cluster biosynthetic enzyme
FYA69_RS13880	COG3396	Phenylacetate-CoA oxygenase
FYA69_RS13885	COG3460	Phenylacetate-CoA oxygenase
FYA69_RS13890	COG3396	Phenylacetate-CoA oxygenase
FYA69_RS13895	COG3327	negative regulation of DNA-templated transcription, initiation
FYA69_RS13900	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FYA69_RS13905	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FYA69_RS13910	COG0501	Belongs to the peptidase M48B family
FYA69_RS13915	COG1162	GTPase activity
FYA69_RS13920	COG3622	Belongs to the hyi family
FYA69_RS13935	COG0335	large ribosomal subunit rRNA binding
FYA69_RS13965	COG0175	sulfate reduction
FYA69_RS13970	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FYA69_RS13975	COG4208	sulfate ABC transporter
FYA69_RS13980	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FYA69_RS13985	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FYA69_RS13990	COG0450	alkyl hydroperoxide reductase
FYA69_RS13995	COG1960	acyl-CoA dehydrogenase activity
FYA69_RS14000	COG2985	domain, Protein
FYA69_RS14015	COG0123	including yeast histone deacetylase and acetoin utilization protein
FYA69_RS14020	COG2951	lytic endotransglycosylase activity
FYA69_RS14030	COG0587	DNA-directed DNA polymerase activity
FYA69_RS14035	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA69_RS14040	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FYA69_RS14045	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FYA69_RS14065	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FYA69_RS14070	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FYA69_RS14080	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FYA69_RS14085	COG0077	Prephenate dehydratase
FYA69_RS14085	COG1605	Chorismate mutase
FYA69_RS14090	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FYA69_RS14105	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYA69_RS14125	COG0165	Argininosuccinate lyase
FYA69_RS14180	COG0586	Pfam SNARE associated Golgi protein
FYA69_RS14205	COG2951	lytic endotransglycosylase activity
FYA69_RS14210	COG2833	Protein of unknown function (DUF455)
FYA69_RS14225	COG1132	(ABC) transporter
FYA69_RS14240	COG3038	cytochrome b561
FYA69_RS14245	COG3237	CsbD-like
FYA69_RS14265	COG2823	Periplasmic or secreted lipoprotein
FYA69_RS14280	COG0672	)-iron permease
FYA69_RS14295	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
FYA69_RS14300	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS14305	COG3243	poly(R)-hydroxyalkanoic acid synthase
FYA69_RS14315	COG0564	pseudouridine synthase activity
FYA69_RS14325	COG1199	ATP-dependent helicase activity
FYA69_RS14330	COG2183	response to ionizing radiation
FYA69_RS14355	COG4774	siderophore transport
FYA69_RS14365	COG1595	DNA-templated transcription, initiation
FYA69_RS14370	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FYA69_RS14375	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA69_RS14380	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA69_RS14385	COG0567	Dehydrogenase, E1 component
FYA69_RS14390	COG1297	OPT oligopeptide transporter protein
FYA69_RS14400	COG0281	malic enzyme
FYA69_RS14400	COG0280	phosphate acetyltransferase
FYA69_RS14410	COG4774	siderophore transport
FYA69_RS14415	COG3128	pkhd-type hydroxylase
FYA69_RS14425	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA69_RS14435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA69_RS14440	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA69_RS14450	COG3842	ATPase activity
FYA69_RS14455	COG0583	DNA-binding transcription factor activity
FYA69_RS14465	COG0372	Belongs to the citrate synthase family
FYA69_RS14470	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FYA69_RS14475	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYA69_RS14480	COG1053	succinate dehydrogenase
FYA69_RS14485	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FYA69_RS14490	COG2009	succinate dehydrogenase
FYA69_RS14495	COG2188	Transcriptional regulator
FYA69_RS14500	COG0039	L-malate dehydrogenase activity
FYA69_RS14520	COG1981	membrane
FYA69_RS14560	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYA69_RS14565	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA69_RS14575	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FYA69_RS14590	COG0148	phosphopyruvate hydratase activity
FYA69_RS14600	COG0504	CTP synthase activity
FYA69_RS14625	COG0601	transmembrane transport
FYA69_RS14630	COG0747	negative chemotaxis
FYA69_RS14635	COG4172	Belongs to the ABC transporter superfamily
FYA69_RS14640	COG1446	asparaginase
FYA69_RS14675	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FYA69_RS14695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA69_RS14705	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FYA69_RS14710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA69_RS14715	COG0791	NLP P60 protein
FYA69_RS14730	COG0583	DNA-binding transcription factor activity
FYA69_RS14755	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FYA69_RS14770	COG0670	Belongs to the BI1 family
FYA69_RS14790	COG1381	Involved in DNA repair and RecF pathway recombination
FYA69_RS14795	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FYA69_RS14800	COG0571	ribonuclease III activity
FYA69_RS14805	COG0681	Belongs to the peptidase S26 family
FYA69_RS14810	COG0481	GTPase activity
FYA69_RS14845	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA69_RS14870	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA69_RS14875	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYA69_RS14880	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS14890	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FYA69_RS14900	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FYA69_RS14910	COG0424	maF-like protein
FYA69_RS14920	COG3023	N-Acetylmuramoyl-L-alanine amidase
FYA69_RS14925	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FYA69_RS14930	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FYA69_RS14935	COG0546	phosphoglycolate phosphatase activity
FYA69_RS14940	COG0564	pseudouridine synthase activity
FYA69_RS14945	COG1530	ribonuclease E activity
FYA69_RS14960	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FYA69_RS14965	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FYA69_RS14970	COG0159	tryptophan synthase activity
FYA69_RS14980	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYA69_RS14990	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYA69_RS14995	COG3228	Belongs to the MtfA family
FYA69_RS15005	COG0251	oxidation-reduction process
FYA69_RS15010	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FYA69_RS15030	COG2878	Part of a membrane complex involved in electron transport
FYA69_RS15035	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FYA69_RS15065	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA69_RS15100	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FYA69_RS15105	COG1122	ATPase activity
FYA69_RS15110	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYA69_RS15115	COG2917	probably involved in intracellular septation
FYA69_RS15120	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA69_RS15125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA69_RS15130	COG0765	amino acid transport
FYA69_RS15135	COG1126	abc transporter atp-binding protein
FYA69_RS15140	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FYA69_RS15150	COG1196	nuclear chromosome segregation
FYA69_RS15155	COG0477	Major facilitator Superfamily
FYA69_RS15160	COG1573	uracil-dna glycosylase
FYA69_RS15165	COG1214	PFAM Peptidase M22, glycoprotease
FYA69_RS15185	COG0450	alkyl hydroperoxide reductase
FYA69_RS15190	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA69_RS15205	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FYA69_RS15210	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FYA69_RS15215	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FYA69_RS15220	COG0560	Phosphoserine phosphatase
FYA69_RS15230	COG1007	ATP synthesis coupled electron transport
FYA69_RS15245	COG0713	ATP synthesis coupled electron transport
FYA69_RS15255	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA69_RS15260	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FYA69_RS15265	COG1034	ATP synthesis coupled electron transport
FYA69_RS15275	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FYA69_RS15280	COG0649	NAD binding
FYA69_RS15285	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA69_RS15290	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA69_RS15295	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA69_RS15300	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA69_RS15320	COG0671	phosphoesterase, PA-phosphatase related
FYA69_RS15330	COG1803	Methylglyoxal synthase
FYA69_RS15330	COG1597	lipid kinase activity
FYA69_RS15340	COG2084	Dehydrogenase
FYA69_RS15345	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS15355	COG0583	DNA-binding transcription factor activity
FYA69_RS15380	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FYA69_RS15395	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FYA69_RS15445	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FYA69_RS15455	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FYA69_RS15460	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FYA69_RS15485	COG0653	protein targeting
FYA69_RS15490	COG0739	heme binding
FYA69_RS15505	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FYA69_RS15520	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FYA69_RS15525	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYA69_RS15530	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYA69_RS15535	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FYA69_RS15545	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FYA69_RS15550	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYA69_RS15555	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYA69_RS15565	COG3116	cell division
FYA69_RS15570	COG0275	rRNA processing
FYA69_RS15575	COG2001	Belongs to the MraZ family
FYA69_RS15585	COG0488	(ABC) transporter
FYA69_RS15590	COG0418	dihydroorotase activity
FYA69_RS15595	COG1473	amidohydrolase
FYA69_RS15650	COG0427	acetyl-CoA hydrolase
FYA69_RS15660	COG3264	Mechanosensitive ion channel
FYA69_RS15660	COG1511	domain protein
FYA69_RS15665	COG0730	response to heat
FYA69_RS15680	COG2176	DNA-directed DNA polymerase activity
FYA69_RS15700	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA69_RS15705	COG3384	dioxygenase
FYA69_RS15720	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FYA69_RS15790	COG4964	Belongs to the GSP D family
FYA69_RS15835	COG1846	Transcriptional regulator
FYA69_RS15870	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FYA69_RS15880	COG2070	2-Nitropropane dioxygenase
FYA69_RS15885	COG2070	2-Nitropropane dioxygenase
FYA69_RS15895	COG2610	gluconate transmembrane transporter activity
FYA69_RS15910	COG1408	metallophosphoesterase
FYA69_RS15915	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA69_RS15915	COG0493	'glutamate synthase
FYA69_RS15920	COG2199	diguanylate cyclase activity
FYA69_RS15925	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FYA69_RS15960	COG2159	amidohydrolase
FYA69_RS15970	COG0583	DNA-binding transcription factor activity
FYA69_RS15985	COG1024	Enoyl-CoA hydratase
FYA69_RS15990	COG2186	Transcriptional regulator
FYA69_RS15995	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS16005	COG0833	amino acid
FYA69_RS16015	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FYA69_RS16050	COG5265	(ABC) transporter
FYA69_RS16090	COG1971	Probably functions as a manganese efflux pump
FYA69_RS16095	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYA69_RS16105	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA69_RS16110	COG2814	Major facilitator Superfamily
FYA69_RS16135	COG4608	Belongs to the ABC transporter superfamily
FYA69_RS16155	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA69_RS16165	COG3383	formate dehydrogenase (NAD+) activity
FYA69_RS16180	COG0747	negative chemotaxis
FYA69_RS16190	COG0625	glutathione transferase activity
FYA69_RS16220	COG1595	DNA-templated transcription, initiation
FYA69_RS16230	COG4774	siderophore transport
FYA69_RS16245	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYA69_RS16260	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA69_RS16265	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FYA69_RS16290	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA69_RS16295	COG1024	Enoyl-CoA hydratase
FYA69_RS16330	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA69_RS16335	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA69_RS16340	COG1116	anion transmembrane transporter activity
FYA69_RS16350	COG3585	molybdate ion transport
FYA69_RS16410	COG0583	DNA-binding transcription factor activity
FYA69_RS16415	COG4948	Mandelate Racemase Muconate Lactonizing
FYA69_RS16420	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS16450	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS16485	COG4177	L-phenylalanine transmembrane transporter activity
FYA69_RS16510	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FYA69_RS16525	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FYA69_RS16530	COG1538	Outer membrane efflux protein
FYA69_RS16535	COG0577	efflux transmembrane transporter activity
FYA69_RS16535	COG1136	(ABC) transporter
FYA69_RS16540	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA69_RS16555	COG0259	pyridoxamine-phosphate oxidase activity
FYA69_RS16560	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYA69_RS16565	COG0579	oxidoreductase
FYA69_RS16575	COG0405	Gamma-glutamyltransferase
FYA69_RS16585	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS16595	COG0114	fumarate hydratase activity
FYA69_RS16600	COG0802	atpase or kinase
FYA69_RS16605	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA69_RS16610	COG0586	Pfam SNARE associated Golgi protein
FYA69_RS16615	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FYA69_RS16620	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FYA69_RS16625	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FYA69_RS16640	COG0617	tRNA 3'-terminal CCA addition
FYA69_RS16675	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FYA69_RS16685	COG1024	Enoyl-CoA hydratase
FYA69_RS16695	COG2188	Transcriptional regulator
FYA69_RS16700	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FYA69_RS16715	COG0752	glycyl-tRNA synthetase alpha subunit
FYA69_RS16720	COG0751	glycine-tRNA ligase activity
FYA69_RS16725	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYA69_RS16730	COG0204	Acyl-transferase
FYA69_RS16760	COG0242	peptide deformylase activity
FYA69_RS16770	COG0700	Nucleoside recognition
FYA69_RS16775	COG0469	pyruvate kinase activity
FYA69_RS16780	COG1929	Belongs to the glycerate kinase type-1 family
FYA69_RS16790	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FYA69_RS16795	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA69_RS16800	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FYA69_RS16810	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FYA69_RS16820	COG2154	pterin-4-alpha-carbinolamine dehydratase
FYA69_RS16825	COG2885	chlorophyll binding
FYA69_RS16835	COG0667	Aldo Keto reductase
FYA69_RS16845	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS16865	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA69_RS16870	COG0288	reversible hydration of carbon dioxide
FYA69_RS16890	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA69_RS16900	COG4829	muconolactone delta-isomerase
FYA69_RS16905	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FYA69_RS16915	COG1414	Transcriptional regulator
FYA69_RS16920	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS16925	COG2031	fatty acid transporter
FYA69_RS16930	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA69_RS16940	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FYA69_RS16945	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FYA69_RS16960	COG0129	dihydroxy-acid dehydratase activity
FYA69_RS16965	COG1609	Transcriptional regulator
FYA69_RS16990	COG4106	trans-aconitate 2-methyltransferase activity
FYA69_RS17005	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FYA69_RS17040	COG0163	prenyltransferase activity
FYA69_RS17045	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FYA69_RS17050	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA69_RS17055	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FYA69_RS17060	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FYA69_RS17075	COG3712	iron ion homeostasis
FYA69_RS17105	COG0659	secondary active sulfate transmembrane transporter activity
FYA69_RS17125	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS17140	COG4774	siderophore transport
FYA69_RS17150	COG1595	DNA-templated transcription, initiation
FYA69_RS17165	COG0142	geranyltranstransferase activity
FYA69_RS17170	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FYA69_RS17175	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FYA69_RS17180	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FYA69_RS17185	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FYA69_RS17205	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA69_RS17205	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA69_RS17210	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FYA69_RS17225	COG0583	DNA-binding transcription factor activity
FYA69_RS17230	COG0861	Integral membrane protein TerC family
FYA69_RS17245	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FYA69_RS17250	COG0793	Belongs to the peptidase S41A family
FYA69_RS17255	COG4942	peptidase
FYA69_RS17260	COG0588	phosphoglycerate mutase activity
FYA69_RS17270	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA69_RS17275	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FYA69_RS17280	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FYA69_RS17285	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS17300	COG2226	methyltransferase
FYA69_RS17305	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FYA69_RS17310	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FYA69_RS17320	COG2204	response regulator
FYA69_RS17325	COG5000	phosphorelay sensor kinase activity
FYA69_RS17335	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FYA69_RS17335	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA69_RS17370	COG2188	Transcriptional regulator
FYA69_RS17385	COG0583	DNA-binding transcription factor activity
FYA69_RS17390	COG1012	belongs to the aldehyde dehydrogenase family
FYA69_RS17410	COG0546	phosphoglycolate phosphatase activity
FYA69_RS17425	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYA69_RS17430	COG0242	peptide deformylase activity
FYA69_RS17440	COG1522	sequence-specific DNA binding
FYA69_RS17445	COG2879	small protein
FYA69_RS17450	COG1966	Carbon starvation protein
FYA69_RS17480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA69_RS17485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA69_RS17490	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FYA69_RS17495	COG3181	Tripartite tricarboxylate transporter family receptor
FYA69_RS17560	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA69_RS17595	COG0640	Transcriptional regulator
FYA69_RS17635	COG0735	belongs to the Fur family
FYA69_RS17640	COG2207	Transcriptional regulator
FYA69_RS17645	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYA69_RS17650	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FYA69_RS17655	COG0513	Belongs to the DEAD box helicase family
FYA69_RS17680	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FYA69_RS17695	COG1305	Transglutaminase-like
FYA69_RS17735	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FYA69_RS17740	COG1950	PFAM Membrane protein of
FYA69_RS17765	COG0024	Methionine aminopeptidase
FYA69_RS17770	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FYA69_RS17780	COG1560	Kdo2-lipid A biosynthetic process
FYA69_RS17785	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FYA69_RS17795	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FYA69_RS17830	COG0735	belongs to the Fur family
FYA69_RS17835	COG0523	cobalamin synthesis protein
FYA69_RS17850	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FYA69_RS17860	COG2096	Adenosyltransferase
FYA69_RS17865	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FYA69_RS17870	COG0321	lipoyl(octanoyl) transferase activity
FYA69_RS17880	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA69_RS17885	COG1686	Belongs to the peptidase S11 family
FYA69_RS17910	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYA69_RS17920	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FYA69_RS17930	COG0859	PFAM glycosyl transferase family 9
FYA69_RS17965	COG0477	Major facilitator Superfamily
FYA69_RS17980	COG3568	Endonuclease Exonuclease Phosphatase
FYA69_RS17985	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FYA69_RS18015	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA69_RS18020	COG1956	GAF domain-containing protein
FYA69_RS18025	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA69_RS18040	COG2186	Transcriptional regulator
FYA69_RS18045	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYA69_RS18060	COG1840	ABC-type Fe3 transport system, periplasmic component
FYA69_RS18100	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYA69_RS18105	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FYA69_RS18110	COG1086	Polysaccharide biosynthesis protein
FYA69_RS18140	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA69_RS18150	COG1028	Short-chain dehydrogenase reductase Sdr
FYA69_RS18155	COG1012	belongs to the aldehyde dehydrogenase family
FYA69_RS18180	COG1522	sequence-specific DNA binding
FYA69_RS18185	COG3781	membrane
FYA69_RS18225	COG2200	EAL domain
FYA69_RS18235	COG0592	DNA-directed DNA polymerase activity
FYA69_RS18240	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FYA69_RS18245	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FYA69_RS18250	COG0594	ribonuclease P activity
FYA69_RS18255	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FYA69_RS18260	COG0706	membrane insertase activity
FYA69_RS18265	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FYA69_RS18270	COG1473	amidohydrolase
FYA69_RS18275	COG4608	Belongs to the ABC transporter superfamily
FYA69_RS18280	COG0444	Belongs to the ABC transporter superfamily
FYA69_RS18285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA69_RS18290	COG0601	transmembrane transport
FYA69_RS18300	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FYA69_RS18305	COG1505	serine-type exopeptidase activity
FYA69_RS18315	COG0281	malic enzyme
FYA69_RS18315	COG0280	phosphate acetyltransferase
FYA69_RS18345	COG0436	Aminotransferase
FYA69_RS18350	COG1278	Cold shock