locus-tag class description H558_RS00010 PF01527 Transposase H558_RS00015 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS00015 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS00015 PF01610 Transposase H558_RS00025 PF01047 MarR family H558_RS00030 PF02321 Outer membrane efflux protein H558_RS00035 PF00529 HlyD membrane-fusion protein of T1SS H558_RS00035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H558_RS00040 PF07690 Major Facilitator Superfamily H558_RS00065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H558_RS00070 PF00202 Aminotransferase class-III H558_RS00075 PF05872 Bacterial protein of unknown function (DUF853) H558_RS00080 PF01709 Transcriptional regulator H558_RS00085 PF02843 Phosphoribosylglycinamide synthetase, C domain H558_RS00085 PF02844 Phosphoribosylglycinamide synthetase, N domain H558_RS00085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H558_RS00090 PF01218 Coproporphyrinogen III oxidase H558_RS00095 PF01467 Cytidylyltransferase-like H558_RS00105 PF02590 Predicted SPOUT methyltransferase H558_RS00110 PF02545 Maf-like protein H558_RS00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS00120 PF02743 Cache domain H558_RS00120 PF00512 His Kinase A (phospho-acceptor) domain H558_RS00125 PF00158 Sigma-54 interaction domain H558_RS00125 PF00072 Response regulator receiver domain H558_RS00125 PF02954 Bacterial regulatory protein, Fis family H558_RS00130 PF00291 Pyridoxal-phosphate dependent enzyme H558_RS00150 PF10119 Predicted methyltransferase regulatory domain H558_RS00150 PF13847 Methyltransferase domain H558_RS00155 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS00155 PF01610 Transposase H558_RS00155 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS00165 PF01297 Zinc-uptake complex component A periplasmic H558_RS00170 PF00005 ABC transporter H558_RS00175 PF00950 ABC 3 transport family H558_RS00180 PF00950 ABC 3 transport family H558_RS00190 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS00190 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS00190 PF01610 Transposase H558_RS00195 PF13360 PQQ-like domain H558_RS00195 PF01011 PQQ enzyme repeat H558_RS00205 PF07715 TonB-dependent Receptor Plug Domain H558_RS00205 PF00593 TonB dependent receptor H558_RS00210 PF07690 Major Facilitator Superfamily H558_RS00225 PF00696 Amino acid kinase family H558_RS00225 PF01842 ACT domain H558_RS00225 PF13840 ACT domain H558_RS00230 PF01171 PP-loop family H558_RS00230 PF09179 TilS substrate binding domain H558_RS00235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H558_RS00240 PF06029 AlkA N-terminal domain H558_RS00240 PF12833 Helix-turn-helix domain H558_RS00240 PF00730 HhH-GPD superfamily base excision DNA repair protein H558_RS00240 PF02805 Metal binding domain of Ada H558_RS00245 PF01406 tRNA synthetases class I (C) catalytic domain H558_RS00245 PF09190 DALR domain H558_RS00255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H558_RS00260 PF00149 Calcineurin-like phosphoesterase H558_RS00265 PF02673 Bacitracin resistance protein BacA H558_RS00270 PF03471 Transporter associated domain H558_RS00270 PF03741 Integral membrane protein TerC family H558_RS00275 PF00459 Inositol monophosphatase family H558_RS00280 PF00588 SpoU rRNA Methylase family H558_RS00285 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS00295 PF00924 Mechanosensitive ion channel H558_RS00295 PF05552 Conserved TM helix H558_RS00320 PF09084 NMT1/THI5 like H558_RS00325 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS00330 PF12857 TOBE-like domain H558_RS00330 PF00005 ABC transporter H558_RS00340 PF01425 Amidase H558_RS00345 PF07729 FCD domain H558_RS00345 PF00392 Bacterial regulatory proteins, gntR family H558_RS00360 PF03358 NADPH-dependent FMN reductase H558_RS00365 PF07311 Dodecin H558_RS00375 PF08240 Alcohol dehydrogenase GroES-like domain H558_RS00375 PF00107 Zinc-binding dehydrogenase H558_RS00385 PF00488 MutS domain V H558_RS00385 PF05190 MutS family domain IV H558_RS00385 PF05192 MutS domain III H558_RS00385 PF05188 MutS domain II H558_RS00385 PF01624 MutS domain I H558_RS00390 PF08007 Cupin superfamily protein H558_RS00400 PF06804 NlpB/DapX lipoprotein H558_RS00405 PF00701 Dihydrodipicolinate synthetase family H558_RS00410 PF02163 Peptidase family M50 H558_RS00415 PF01300 Telomere recombination H558_RS00420 PF04228 Putative neutral zinc metallopeptidase H558_RS00440 PF02627 Carboxymuconolactone decarboxylase family H558_RS00450 PF13091 PLD-like domain H558_RS00450 PF13396 Phospholipase_D-nuclease N-terminal H558_RS00455 PF07690 Major Facilitator Superfamily H558_RS00470 PF00291 Pyridoxal-phosphate dependent enzyme H558_RS00475 PF01527 Transposase H558_RS00480 PF00665 Integrase core domain H558_RS00480 PF13333 Integrase core domain H558_RS00480 PF13276 HTH-like domain H558_RS00485 PF01527 Transposase H558_RS00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS00490 PF03466 LysR substrate binding domain H558_RS00530 PF00563 EAL domain H558_RS00530 PF13426 PAS domain H558_RS00530 PF00990 Diguanylate cyclase, GGDEF domain H558_RS00545 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS00555 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS00555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS00555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS00560 PF02515 CoA-transferase family III H558_RS00565 PF07729 FCD domain H558_RS00565 PF00392 Bacterial regulatory proteins, gntR family H558_RS00575 PF03797 Autotransporter beta-domain H558_RS00590 PF08281 Sigma-70, region 4 H558_RS00590 PF04542 Sigma-70 region 2 H558_RS00605 PF01527 Transposase H558_RS00610 PF13276 HTH-like domain H558_RS00610 PF13683 Integrase core domain H558_RS00630 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS00635 PF01557 Fumarylacetoacetate (FAA) hydrolase family H558_RS00655 PF00005 ABC transporter H558_RS00660 PF01032 FecCD transport family H558_RS00665 PF01032 FecCD transport family H558_RS00670 PF01497 Periplasmic binding protein H558_RS00675 PF13439 Glycosyltransferase Family 4 H558_RS00675 PF00534 Glycosyl transferases group 1 H558_RS00680 PF03840 Preprotein translocase SecG subunit H558_RS00685 PF00121 Triosephosphate isomerase H558_RS00690 PF08659 KR domain H558_RS00690 PF00698 Acyl transferase domain H558_RS00690 PF08240 Alcohol dehydrogenase GroES-like domain H558_RS00690 PF14765 Polyketide synthase dehydratase H558_RS00690 PF00550 Phosphopantetheine attachment site H558_RS00700 PF01425 Amidase H558_RS00705 PF01610 Transposase H558_RS00705 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS00705 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS00710 PF00543 Nitrogen regulatory protein P-II H558_RS00715 PF00795 Carbon-nitrogen hydrolase H558_RS00715 PF02540 NAD synthase H558_RS00720 PF00924 Mechanosensitive ion channel H558_RS00725 PF00206 Lyase H558_RS00725 PF14698 Argininosuccinate lyase C-terminal H558_RS00735 PF13411 MerR HTH family regulatory protein H558_RS00740 PF00403 Heavy-metal-associated domain H558_RS00745 PF01435 Peptidase family M48 H558_RS00750 PF00561 alpha/beta hydrolase fold H558_RS00760 PF00005 ABC transporter H558_RS00765 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS00775 PF00378 Enoyl-CoA hydratase/isomerase H558_RS00780 PF02515 CoA-transferase family III H558_RS00785 PF01425 Amidase H558_RS00790 PF07729 FCD domain H558_RS00790 PF00392 Bacterial regulatory proteins, gntR family H558_RS00795 PF13018 Extended Signal Peptide of Type V secretion system H558_RS00795 PF16168 Adhesin of bacterial autotransporter system, probable stalk H558_RS00795 PF03797 Autotransporter beta-domain H558_RS00795 PF03212 Pertactin H558_RS00800 PF03212 Pertactin H558_RS00800 PF03797 Autotransporter beta-domain H558_RS00800 PF16168 Adhesin of bacterial autotransporter system, probable stalk H558_RS00805 PF13683 Integrase core domain H558_RS00805 PF13276 HTH-like domain H558_RS00810 PF13276 HTH-like domain H558_RS00810 PF13683 Integrase core domain H558_RS00815 PF01527 Transposase H558_RS00840 PF02403 Seryl-tRNA synthetase N-terminal domain H558_RS00840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H558_RS00845 PF16193 AAA C-terminal domain H558_RS00845 PF12002 MgsA AAA+ ATPase C terminal H558_RS00845 PF00004 ATPase family associated with various cellular activities (AAA) H558_RS00850 PF03548 Outer membrane lipoprotein carrier protein LolA H558_RS00855 PF09397 Ftsk gamma domain H558_RS00855 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H558_RS00855 PF01580 FtsK/SpoIIIE family H558_RS00855 PF17854 FtsK alpha domain H558_RS00860 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS00865 PF01713 Smr domain H558_RS00865 PF00488 MutS domain V H558_RS00870 PF00893 Small Multidrug Resistance protein H558_RS00880 PF00474 Sodium:solute symporter family H558_RS00890 PF03814 Potassium-transporting ATPase A subunit H558_RS00900 PF02669 K+-transporting ATPase, c chain H558_RS00905 PF00512 His Kinase A (phospho-acceptor) domain H558_RS00905 PF02702 Osmosensitive K+ channel His kinase sensor domain H558_RS00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS00905 PF13492 GAF domain H558_RS00905 PF13493 Domain of unknown function (DUF4118) H558_RS00910 PF00486 Transcriptional regulatory protein, C terminal H558_RS00910 PF00072 Response regulator receiver domain H558_RS00925 PF00180 Isocitrate/isopropylmalate dehydrogenase H558_RS00940 PF00034 Cytochrome c H558_RS00945 PF01434 Peptidase family M41 H558_RS00945 PF00004 ATPase family associated with various cellular activities (AAA) H558_RS00945 PF17862 AAA+ lid domain H558_RS00965 PF05193 Peptidase M16 inactive domain H558_RS00965 PF00675 Insulinase (Peptidase family M16) H558_RS00970 PF00684 DnaJ central domain H558_RS00970 PF00226 DnaJ domain H558_RS00970 PF01556 DnaJ C terminal domain H558_RS00975 PF00012 Hsp70 protein H558_RS00985 PF01025 GrpE H558_RS00995 PF00762 Ferrochelatase H558_RS01000 PF01628 HrcA protein C terminal domain H558_RS01000 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding H558_RS01005 PF01513 ATP-NAD kinase H558_RS01010 PF02463 RecF/RecN/SMC N terminal domain H558_RS01015 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS01015 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS01015 PF01610 Transposase H558_RS01020 PF13683 Integrase core domain H558_RS01020 PF13276 HTH-like domain H558_RS01025 PF01527 Transposase H558_RS01030 PF01610 Transposase H558_RS01030 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS01030 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS01035 PF01475 Ferric uptake regulator family H558_RS01040 PF04355 SmpA / OmlA family H558_RS01045 PF01113 Dihydrodipicolinate reductase, N-terminus H558_RS01045 PF05173 Dihydrodipicolinate reductase, C-terminus H558_RS01050 PF01565 FAD binding domain H558_RS01050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H558_RS01060 PF13276 HTH-like domain H558_RS01060 PF13333 Integrase core domain H558_RS01060 PF00665 Integrase core domain H558_RS01065 PF01527 Transposase H558_RS01070 PF13276 HTH-like domain H558_RS01070 PF13683 Integrase core domain H558_RS01075 PF13098 Thioredoxin-like domain H558_RS01085 PF00330 Aconitase family (aconitate hydratase) H558_RS01085 PF00694 Aconitase C-terminal domain H558_RS01090 PF04303 PrpF protein H558_RS01095 PF01810 LysE type translocator H558_RS01100 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS01125 PF07729 FCD domain H558_RS01125 PF00392 Bacterial regulatory proteins, gntR family H558_RS01130 PF00330 Aconitase family (aconitate hydratase) H558_RS01130 PF00694 Aconitase C-terminal domain H558_RS01135 PF01979 Amidohydrolase family H558_RS01140 PF00857 Isochorismatase family H558_RS01145 PF07683 Cobalamin synthesis protein cobW C-terminal domain H558_RS01145 PF02492 CobW/HypB/UreG, nucleotide-binding domain H558_RS01175 PF03466 LysR substrate binding domain H558_RS01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS01185 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H558_RS01190 PF04376 Arginine-tRNA-protein transferase, N terminus H558_RS01190 PF04377 Arginine-tRNA-protein transferase, C terminus H558_RS01195 PF01180 Dihydroorotate dehydrogenase H558_RS01200 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS01200 PF01610 Transposase H558_RS01200 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS01205 PF01527 Transposase H558_RS01210 PF13683 Integrase core domain H558_RS01210 PF13276 HTH-like domain H558_RS01215 PF01610 Transposase H558_RS01215 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS01215 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS01225 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS01225 PF01610 Transposase H558_RS01225 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS01230 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS01235 PF09339 IclR helix-turn-helix domain H558_RS01235 PF01614 Bacterial transcriptional regulator H558_RS01255 PF00270 DEAD/DEAH box helicase H558_RS01255 PF00271 Helicase conserved C-terminal domain H558_RS01280 PF00561 alpha/beta hydrolase fold H558_RS01285 PF01435 Peptidase family M48 H558_RS01290 PF00483 Nucleotidyl transferase H558_RS01305 PF00690 Cation transporter/ATPase, N-terminus H558_RS01305 PF00689 Cation transporting ATPase, C-terminus H558_RS01310 PF13683 Integrase core domain H558_RS01310 PF13276 HTH-like domain H558_RS01315 PF01527 Transposase H558_RS01325 PF00557 Metallopeptidase family M24 H558_RS01325 PF05195 Aminopeptidase P, N-terminal domain H558_RS01335 PF01494 FAD binding domain H558_RS01350 PF01207 Dihydrouridine synthase (Dus) H558_RS01355 PF02954 Bacterial regulatory protein, Fis family H558_RS01360 PF02142 MGS-like domain H558_RS01360 PF01808 AICARFT/IMPCHase bienzyme H558_RS01365 PF02075 Crossover junction endodeoxyribonuclease RuvC H558_RS01370 PF07499 RuvA, C-terminal domain H558_RS01370 PF01330 RuvA N terminal domain H558_RS01385 PF17864 RuvB AAA lid domain H558_RS01385 PF05496 Holliday junction DNA helicase RuvB P-loop domain H558_RS01385 PF05491 RuvB C-terminal winged helix domain H558_RS01390 PF00270 DEAD/DEAH box helicase H558_RS01390 PF00570 HRDC domain H558_RS01390 PF16124 RecQ zinc-binding H558_RS01390 PF00271 Helicase conserved C-terminal domain H558_RS01390 PF09382 RQC domain H558_RS01400 PF00072 Response regulator receiver domain H558_RS01400 PF00486 Transcriptional regulatory protein, C terminal H558_RS01410 PF02322 Cytochrome bd terminal oxidase subunit II H558_RS01420 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H558_RS01420 PF00749 tRNA synthetases class I (E and Q), catalytic domain H558_RS01425 PF03775 Septum formation inhibitor MinC, C-terminal domain H558_RS01425 PF05209 Septum formation inhibitor MinC, N-terminal domain H558_RS01430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H558_RS01435 PF03776 Septum formation topological specificity factor MinE H558_RS01440 PF01610 Transposase H558_RS01440 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS01440 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS01455 PF00005 ABC transporter H558_RS01455 PF12848 ABC transporter H558_RS01470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS01470 PF00005 ABC transporter H558_RS01475 PF00005 ABC transporter H558_RS01475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS01480 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS01480 PF12911 N-terminal TM domain of oligopeptide transport permease C H558_RS01485 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS01490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H558_RS01495 PF00535 Glycosyl transferase family 2 H558_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS01500 PF03466 LysR substrate binding domain H558_RS01505 PF00884 Sulfatase H558_RS01510 PF07943 Penicillin-binding protein 5, C-terminal domain H558_RS01510 PF00768 D-alanyl-D-alanine carboxypeptidase H558_RS01520 PF01810 LysE type translocator H558_RS01530 PF08240 Alcohol dehydrogenase GroES-like domain H558_RS01530 PF00107 Zinc-binding dehydrogenase H558_RS01535 PF00989 PAS fold H558_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS01535 PF00512 His Kinase A (phospho-acceptor) domain H558_RS01540 PF00072 Response regulator receiver domain H558_RS01540 PF00196 Bacterial regulatory proteins, luxR family H558_RS01550 PF07729 FCD domain H558_RS01550 PF00392 Bacterial regulatory proteins, gntR family H558_RS01560 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS01570 PF14537 Cytochrome c3 H558_RS01570 PF00890 FAD binding domain H558_RS01575 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS01580 PF03880 DbpA RNA binding domain H558_RS01580 PF00270 DEAD/DEAH box helicase H558_RS01580 PF00271 Helicase conserved C-terminal domain H558_RS01585 PF00924 Mechanosensitive ion channel H558_RS01595 PF00690 Cation transporter/ATPase, N-terminus H558_RS01595 PF00689 Cation transporting ATPase, C-terminus H558_RS01600 PF04542 Sigma-70 region 2 H558_RS01600 PF08281 Sigma-70, region 4 H558_RS01610 PF07715 TonB-dependent Receptor Plug Domain H558_RS01610 PF07660 Secretin and TonB N terminus short domain H558_RS01610 PF00593 TonB dependent receptor H558_RS01630 PF00465 Iron-containing alcohol dehydrogenase H558_RS01635 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS01640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS01640 PF03466 LysR substrate binding domain H558_RS01645 PF13520 Amino acid permease H558_RS01650 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H558_RS01650 PF01276 Orn/Lys/Arg decarboxylase, major domain H558_RS01650 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H558_RS01655 PF13520 Amino acid permease H558_RS01665 PF01527 Transposase H558_RS01670 PF13276 HTH-like domain H558_RS01670 PF13683 Integrase core domain H558_RS01675 PF00166 Chaperonin 10 Kd subunit H558_RS01680 PF00118 TCP-1/cpn60 chaperonin family H558_RS01690 PF01219 Prokaryotic diacylglycerol kinase H558_RS01695 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS01700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H558_RS01705 PF02464 Competence-damaged protein H558_RS01710 PF04608 Phosphatidylglycerophosphatase A H558_RS01715 PF00586 AIR synthase related protein, N-terminal domain H558_RS01715 PF02769 AIR synthase related protein, C-terminal domain H558_RS01720 PF01029 NusB family H558_RS01725 PF00885 6,7-dimethyl-8-ribityllumazine synthase H558_RS01730 PF00925 GTP cyclohydrolase II H558_RS01730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H558_RS01745 PF00593 TonB dependent receptor H558_RS01745 PF07660 Secretin and TonB N terminus short domain H558_RS01745 PF07715 TonB-dependent Receptor Plug Domain H558_RS01755 PF08281 Sigma-70, region 4 H558_RS01755 PF04542 Sigma-70 region 2 H558_RS01765 PF00005 ABC transporter H558_RS01770 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS01785 PF00448 SRP54-type protein, GTPase domain H558_RS01785 PF02881 SRP54-type protein, helical bundle domain H558_RS01795 PF01467 Cytidylyltransferase-like H558_RS01800 PF00037 4Fe-4S binding domain H558_RS01805 PF03594 Benzoate membrane transport protein H558_RS01825 PF00593 TonB dependent receptor H558_RS01825 PF07715 TonB-dependent Receptor Plug Domain H558_RS01835 PF01610 Transposase H558_RS01835 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS01835 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS01840 PF01557 Fumarylacetoacetate (FAA) hydrolase family H558_RS01845 PF02515 CoA-transferase family III H558_RS01850 PF00378 Enoyl-CoA hydratase/isomerase H558_RS01855 PF00682 HMGL-like H558_RS01860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS01860 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS01860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS01870 PF00501 AMP-binding enzyme H558_RS01870 PF13193 AMP-binding enzyme C-terminal domain H558_RS01875 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS01880 PF00135 Carboxylesterase family H558_RS01885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS01885 PF03466 LysR substrate binding domain H558_RS01900 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS01910 PF01565 FAD binding domain H558_RS01910 PF02913 FAD linked oxidases, C-terminal domain H558_RS01915 PF00111 2Fe-2S iron-sulfur cluster binding domain H558_RS01915 PF00175 Oxidoreductase NAD-binding domain H558_RS01920 PF00355 Rieske [2Fe-2S] domain H558_RS01930 PF07729 FCD domain H558_RS01930 PF00392 Bacterial regulatory proteins, gntR family H558_RS01940 PF07690 Major Facilitator Superfamily H558_RS01950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS01950 PF03466 LysR substrate binding domain H558_RS01955 PF07715 TonB-dependent Receptor Plug Domain H558_RS01955 PF00593 TonB dependent receptor H558_RS01980 PF01926 50S ribosome-binding GTPase H558_RS01980 PF06071 Protein of unknown function (DUF933) H558_RS01990 PF01195 Peptidyl-tRNA hydrolase H558_RS01995 PF14693 Ribosomal protein TL5, C-terminal domain H558_RS01995 PF01386 Ribosomal L25p family H558_RS02000 PF14572 Phosphoribosyl synthetase-associated domain H558_RS02000 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H558_RS02010 PF00288 GHMP kinases N terminal domain H558_RS02010 PF08544 GHMP kinases C terminal H558_RS02015 PF03550 Outer membrane lipoprotein LolB H558_RS02025 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H558_RS02025 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H558_RS02025 PF06827 Zinc finger found in FPG and IleRS H558_RS02035 PF01494 FAD binding domain H558_RS02055 PF04209 homogentisate 1,2-dioxygenase H558_RS02065 PF00884 Sulfatase H558_RS02070 PF00392 Bacterial regulatory proteins, gntR family H558_RS02070 PF07729 FCD domain H558_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02085 PF00512 His Kinase A (phospho-acceptor) domain H558_RS02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS02085 PF00672 HAMP domain H558_RS02090 PF00486 Transcriptional regulatory protein, C terminal H558_RS02090 PF00072 Response regulator receiver domain H558_RS02095 PF02913 FAD linked oxidases, C-terminal domain H558_RS02095 PF01565 FAD binding domain H558_RS02105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H558_RS02105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H558_RS02105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H558_RS02105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H558_RS02110 PF00342 Phosphoglucose isomerase H558_RS02115 PF00534 Glycosyl transferases group 1 H558_RS02115 PF13477 Glycosyl transferase 4-like H558_RS02120 PF00534 Glycosyl transferases group 1 H558_RS02120 PF13439 Glycosyltransferase Family 4 H558_RS02125 PF00534 Glycosyl transferases group 1 H558_RS02125 PF13439 Glycosyltransferase Family 4 H558_RS02130 PF13537 Glutamine amidotransferase domain H558_RS02130 PF00733 Asparagine synthase H558_RS02135 PF00534 Glycosyl transferases group 1 H558_RS02135 PF13439 Glycosyltransferase Family 4 H558_RS02140 PF03023 Lipid II flippase MurJ H558_RS02145 PF01370 NAD dependent epimerase/dehydratase family H558_RS02150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H558_RS02150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H558_RS02150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H558_RS02155 PF00953 Glycosyl transferase family 4 H558_RS02160 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS02160 PF01610 Transposase H558_RS02160 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS02165 PF03232 Ubiquinone biosynthesis protein COQ7 H558_RS02175 PF00303 Thymidylate synthase H558_RS02180 PF00186 Dihydrofolate reductase H558_RS02185 PF00155 Aminotransferase class I and II H558_RS02185 PF00392 Bacterial regulatory proteins, gntR family H558_RS02190 PF00202 Aminotransferase class-III H558_RS02195 PF00171 Aldehyde dehydrogenase family H558_RS02205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H558_RS02215 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS02220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS02220 PF00005 ABC transporter H558_RS02240 PF02347 Glycine cleavage system P-protein H558_RS02245 PF01597 Glycine cleavage H-protein H558_RS02250 PF08669 Glycine cleavage T-protein C-terminal barrel domain H558_RS02250 PF01571 Aminomethyltransferase folate-binding domain H558_RS02260 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H558_RS02260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H558_RS02260 PF01276 Orn/Lys/Arg decarboxylase, major domain H558_RS02270 PF00583 Acetyltransferase (GNAT) family H558_RS02270 PF13508 Acetyltransferase (GNAT) domain H558_RS02275 PF00692 dUTPase H558_RS02290 PF10609 NUBPL iron-transfer P-loop NTPase H558_RS02300 PF09334 tRNA synthetases class I (M) H558_RS02300 PF01588 Putative tRNA binding domain H558_RS02325 PF16970 Type-1 fimbrial protein, A H558_RS02330 PF00491 Arginase family H558_RS02335 PF00512 His Kinase A (phospho-acceptor) domain H558_RS02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS02340 PF00072 Response regulator receiver domain H558_RS02340 PF00486 Transcriptional regulatory protein, C terminal H558_RS02360 PF01032 FecCD transport family H558_RS02365 PF00127 Copper binding proteins, plastocyanin/azurin family H558_RS02370 PF00005 ABC transporter H558_RS02375 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H558_RS02380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H558_RS02385 PF02627 Carboxymuconolactone decarboxylase family H558_RS02405 PF01547 Bacterial extracellular solute-binding protein H558_RS02410 PF00005 ABC transporter H558_RS02410 PF08402 TOBE domain H558_RS02415 PF13609 Gram-negative porin H558_RS02420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS02420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS02420 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS02425 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS02430 PF03466 LysR substrate binding domain H558_RS02435 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02440 PF02515 CoA-transferase family III H558_RS02445 PF00378 Enoyl-CoA hydratase/isomerase H558_RS02460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS02460 PF03466 LysR substrate binding domain H558_RS02465 PF00149 Calcineurin-like phosphoesterase H558_RS02470 PF02798 Glutathione S-transferase, N-terminal domain H558_RS02470 PF00043 Glutathione S-transferase, C-terminal domain H558_RS02485 PF00155 Aminotransferase class I and II H558_RS02485 PF00392 Bacterial regulatory proteins, gntR family H558_RS02495 PF00881 Nitroreductase family H558_RS02500 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02505 PF00753 Metallo-beta-lactamase superfamily H558_RS02505 PF01613 Flavin reductase like domain H558_RS02510 PF00296 Luciferase-like monooxygenase H558_RS02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS02515 PF03466 LysR substrate binding domain H558_RS02525 PF00378 Enoyl-CoA hydratase/isomerase H558_RS02530 PF13607 Succinyl-CoA ligase like flavodoxin domain H558_RS02530 PF13380 CoA binding domain H558_RS02535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS02535 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS02535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS02560 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02565 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02580 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H558_RS02585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H558_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS02590 PF03466 LysR substrate binding domain H558_RS02615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H558_RS02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS02620 PF03466 LysR substrate binding domain H558_RS02625 PF18158 Adaptive response protein AidB N-terminal domain H558_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS02630 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS02635 PF02515 CoA-transferase family III H558_RS02640 PF02390 Putative methyltransferase H558_RS02645 PF00561 alpha/beta hydrolase fold H558_RS02650 PF05690 Thiazole biosynthesis protein ThiG H558_RS02650 PF02597 ThiS family H558_RS02655 PF01527 Transposase H558_RS02660 PF13276 HTH-like domain H558_RS02660 PF13683 Integrase core domain H558_RS02670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS02670 PF03466 LysR substrate binding domain H558_RS02675 PF01610 Transposase H558_RS02675 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS02675 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS02680 PF08402 TOBE domain H558_RS02680 PF00005 ABC transporter H558_RS02695 PF02881 SRP54-type protein, helical bundle domain H558_RS02695 PF00448 SRP54-type protein, GTPase domain H558_RS02695 PF02978 Signal peptide binding domain H558_RS02710 PF01510 N-acetylmuramoyl-L-alanine amidase H558_RS02715 PF00043 Glutathione S-transferase, C-terminal domain H558_RS02715 PF13417 Glutathione S-transferase, N-terminal domain H558_RS02720 PF00005 ABC transporter H558_RS02725 PF00005 ABC transporter H558_RS02725 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS02750 PF02653 Branched-chain amino acid transport system / permease component H558_RS02760 PF07286 Protein of unknown function (DUF1445) H558_RS02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS02770 PF00183 Hsp90 protein H558_RS02775 PF00860 Permease family H558_RS02790 PF01527 Transposase H558_RS02795 PF13683 Integrase core domain H558_RS02795 PF13276 HTH-like domain H558_RS02800 PF01527 Transposase H558_RS02810 PF05170 AsmA family H558_RS02815 PF05170 AsmA family H558_RS02820 PF03352 Methyladenine glycosylase H558_RS02825 PF03692 Putative zinc- or iron-chelating domain H558_RS02845 PF05962 HutD H558_RS02850 PF01979 Amidohydrolase family H558_RS02860 PF00155 Aminotransferase class I and II H558_RS02865 PF00793 DAHP synthetase I family H558_RS02870 PF05159 Capsule polysaccharide biosynthesis protein H558_RS02875 PF05159 Capsule polysaccharide biosynthesis protein H558_RS02885 PF01527 Transposase H558_RS02890 PF13683 Integrase core domain H558_RS02890 PF13276 HTH-like domain H558_RS02900 PF00106 short chain dehydrogenase H558_RS02915 PF03180 NLPA lipoprotein H558_RS02920 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS02925 PF09383 NIL domain H558_RS02925 PF00005 ABC transporter H558_RS02930 PF01055 Glycosyl hydrolases family 31 H558_RS02930 PF13802 Galactose mutarotase-like H558_RS02935 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H558_RS02935 PF01266 FAD dependent oxidoreductase H558_RS02940 PF00459 Inositol monophosphatase family H558_RS02945 PF13193 AMP-binding enzyme C-terminal domain H558_RS02945 PF00501 AMP-binding enzyme H558_RS02950 PF01546 Peptidase family M20/M25/M40 H558_RS02950 PF07687 Peptidase dimerisation domain H558_RS02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS02955 PF03466 LysR substrate binding domain H558_RS02960 PF03601 Conserved hypothetical protein 698 H558_RS02965 PF03061 Thioesterase superfamily H558_RS02970 PF03448 MgtE intracellular N domain H558_RS02970 PF01769 Divalent cation transporter H558_RS02970 PF00571 CBS domain H558_RS02975 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP H558_RS02985 PF01037 Lrp/AsnC ligand binding domain H558_RS02995 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS03005 PF13683 Integrase core domain H558_RS03005 PF13276 HTH-like domain H558_RS03015 PF01527 Transposase H558_RS03020 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS03020 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS03020 PF01610 Transposase H558_RS03025 PF01145 SPFH domain / Band 7 family H558_RS03030 PF01145 SPFH domain / Band 7 family H558_RS03030 PF12221 Bacterial membrane protein N terminal H558_RS03035 PF16360 GTP-binding GTPase Middle Region H558_RS03035 PF01926 50S ribosome-binding GTPase H558_RS03035 PF13167 GTP-binding GTPase N-terminal H558_RS03040 PF17209 Hfq protein H558_RS03045 PF00155 Aminotransferase class I and II H558_RS03050 PF01926 50S ribosome-binding GTPase H558_RS03050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H558_RS03055 PF13360 PQQ-like domain H558_RS03060 PF09976 Tetratricopeptide repeat-like domain H558_RS03065 PF13393 Histidyl-tRNA synthetase H558_RS03065 PF03129 Anticodon binding domain H558_RS03070 PF04551 GcpE protein H558_RS03080 PF04055 Radical SAM superfamily H558_RS03085 PF00334 Nucleoside diphosphate kinase H558_RS03090 PF00133 tRNA synthetases class I (I, L, M and V) H558_RS03090 PF10458 Valyl tRNA synthetase tRNA binding arm H558_RS03090 PF08264 Anticodon-binding domain of tRNA H558_RS03095 PF01610 Transposase H558_RS03095 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS03095 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS03100 PF01746 tRNA (Guanine-1)-methyltransferase H558_RS03105 PF01782 RimM N-terminal domain H558_RS03110 PF00886 Ribosomal protein S16 H558_RS03115 PF01206 Sulfurtransferase TusA H558_RS03120 PF02272 DHHA1 domain H558_RS03120 PF01411 tRNA synthetases class II (A) H558_RS03120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H558_RS03170 PF13276 HTH-like domain H558_RS03170 PF13683 Integrase core domain H558_RS03175 PF01527 Transposase H558_RS03180 PF13416 Bacterial extracellular solute-binding protein H558_RS03185 PF01266 FAD dependent oxidoreductase H558_RS03190 PF00111 2Fe-2S iron-sulfur cluster binding domain H558_RS03190 PF00175 Oxidoreductase NAD-binding domain H558_RS03190 PF00970 Oxidoreductase FAD-binding domain H558_RS03195 PF02261 Aspartate decarboxylase H558_RS03200 PF00893 Small Multidrug Resistance protein H558_RS03205 PF03476 MOSC N-terminal beta barrel domain H558_RS03205 PF00111 2Fe-2S iron-sulfur cluster binding domain H558_RS03205 PF03473 MOSC domain H558_RS03210 PF05721 Phytanoyl-CoA dioxygenase (PhyH) H558_RS03215 PF06339 Ectoine synthase H558_RS03220 PF00202 Aminotransferase class-III H558_RS03225 PF00583 Acetyltransferase (GNAT) family H558_RS03230 PF12802 MarR family H558_RS03245 PF00202 Aminotransferase class-III H558_RS03250 PF04235 Protein of unknown function (DUF418) H558_RS03255 PF00521 DNA gyrase/topoisomerase IV, subunit A H558_RS03265 PF00986 DNA gyrase B subunit, carboxyl terminus H558_RS03265 PF00204 DNA gyrase B H558_RS03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS03265 PF01751 Toprim domain H558_RS03270 PF00085 Thioredoxin H558_RS03275 PF07497 Rho termination factor, RNA-binding domain H558_RS03275 PF07498 Rho termination factor, N-terminal domain H558_RS03275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H558_RS03285 PF08335 GlnD PII-uridylyltransferase H558_RS03285 PF03710 Glutamate-ammonia ligase adenylyltransferase H558_RS03290 PF02677 Epoxyqueuosine reductase QueH H558_RS03295 PF03315 Serine dehydratase beta chain H558_RS03295 PF03313 Serine dehydratase alpha chain H558_RS03300 PF02690 Na+/Pi-cotransporter H558_RS03305 PF13419 Haloacid dehalogenase-like hydrolase H558_RS03310 PF01738 Dienelactone hydrolase family H558_RS03315 PF02535 ZIP Zinc transporter H558_RS03325 PF06481 COX Aromatic Rich Motif H558_RS03325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H558_RS03335 PF00510 Cytochrome c oxidase subunit III H558_RS03340 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H558_RS03350 PF01612 3'-5' exonuclease H558_RS03350 PF01367 5'-3' exonuclease, C-terminal SAM fold H558_RS03350 PF00476 DNA polymerase family A H558_RS03350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H558_RS03355 PF03641 Possible lysine decarboxylase H558_RS03375 PF01361 Tautomerase enzyme H558_RS03380 PF00571 CBS domain H558_RS03380 PF00005 ABC transporter H558_RS03385 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS03395 PF01610 Transposase H558_RS03395 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS03395 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS03405 PF07690 Major Facilitator Superfamily H558_RS03410 PF00830 Ribosomal L28 family H558_RS03415 PF00471 Ribosomal protein L33 H558_RS03425 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS03425 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS03425 PF01610 Transposase H558_RS03440 PF12802 MarR family H558_RS03445 PF07690 Major Facilitator Superfamily H558_RS03450 PF13603 Leucyl-tRNA synthetase, Domain 2 H558_RS03450 PF08264 Anticodon-binding domain of tRNA H558_RS03450 PF00133 tRNA synthetases class I (I, L, M and V) H558_RS03450 PF09334 tRNA synthetases class I (M) H558_RS03465 PF00171 Aldehyde dehydrogenase family H558_RS03485 PF00529 HlyD membrane-fusion protein of T1SS H558_RS03485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H558_RS03490 PF03412 Peptidase C39 family H558_RS03490 PF00664 ABC transporter transmembrane region H558_RS03490 PF00005 ABC transporter H558_RS03500 PF01527 Transposase H558_RS03505 PF13276 HTH-like domain H558_RS03505 PF13683 Integrase core domain H558_RS03535 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain H558_RS03535 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain H558_RS03545 PF12794 Mechanosensitive ion channel inner membrane domain 1 H558_RS03545 PF00924 Mechanosensitive ion channel H558_RS03545 PF12795 Mechanosensitive ion channel porin domain H558_RS03550 PF01925 Sulfite exporter TauE/SafE H558_RS03555 PF00892 EamA-like transporter family H558_RS03565 PF14579 Helix-hairpin-helix motif H558_RS03565 PF11490 DNA polymerase III polC-type N-terminus II H558_RS03565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H558_RS03565 PF07733 Bacterial DNA polymerase III alpha NTPase domain H558_RS03565 PF14480 DNA polymerase III polC-type N-terminus I H558_RS03565 PF02811 PHP domain H558_RS03565 PF00929 Exonuclease H558_RS03570 PF06434 Aconitate hydratase 2 N-terminus H558_RS03570 PF00330 Aconitase family (aconitate hydratase) H558_RS03570 PF11791 Aconitate B N-terminal domain H558_RS03585 PF00330 Aconitase family (aconitate hydratase) H558_RS03585 PF00694 Aconitase C-terminal domain H558_RS03590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H558_RS03605 PF09285 Elongation factor P, C-terminal H558_RS03605 PF08207 Elongation factor P (EF-P) KOW-like domain H558_RS03605 PF01132 Elongation factor P (EF-P) OB domain H558_RS03620 PF00072 Response regulator receiver domain H558_RS03620 PF02954 Bacterial regulatory protein, Fis family H558_RS03620 PF00158 Sigma-54 interaction domain H558_RS03630 PF13276 HTH-like domain H558_RS03630 PF13683 Integrase core domain H558_RS03635 PF01527 Transposase H558_RS03665 PF00437 Type II/IV secretion system protein H558_RS03675 PF00263 Bacterial type II and III secretion system protein H558_RS03675 PF04972 BON domain H558_RS03675 PF13629 Pilus formation protein N terminal region H558_RS03715 PF01047 MarR family H558_RS03725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H558_RS03730 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS03740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS03740 PF03466 LysR substrate binding domain H558_RS03750 PF00962 Adenosine/AMP deaminase H558_RS03755 PF03466 LysR substrate binding domain H558_RS03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS03760 PF03060 Nitronate monooxygenase H558_RS03765 PF03060 Nitronate monooxygenase H558_RS03770 PF13417 Glutathione S-transferase, N-terminal domain H558_RS03770 PF00043 Glutathione S-transferase, C-terminal domain H558_RS03780 PF05977 Transmembrane secretion effector H558_RS03790 PF00149 Calcineurin-like phosphoesterase H558_RS03800 PF08448 PAS fold H558_RS03800 PF00990 Diguanylate cyclase, GGDEF domain H558_RS03805 PF01118 Semialdehyde dehydrogenase, NAD binding domain H558_RS03810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS03810 PF03466 LysR substrate binding domain H558_RS03830 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS03835 PF03737 Aldolase/RraA H558_RS03840 PF04909 Amidohydrolase H558_RS03845 PF04303 PrpF protein H558_RS03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS03850 PF03466 LysR substrate binding domain H558_RS03855 PF04909 Amidohydrolase H558_RS03860 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS03865 PF00378 Enoyl-CoA hydratase/isomerase H558_RS03870 PF00392 Bacterial regulatory proteins, gntR family H558_RS03870 PF07729 FCD domain H558_RS03875 PF02515 CoA-transferase family III H558_RS03885 PF00324 Amino acid permease H558_RS03890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H558_RS03895 PF03776 Septum formation topological specificity factor MinE H558_RS03915 PF03707 Bacterial signalling protein N terminal repeat H558_RS03915 PF00990 Diguanylate cyclase, GGDEF domain H558_RS03915 PF00563 EAL domain H558_RS03930 PF00664 ABC transporter transmembrane region H558_RS03930 PF00005 ABC transporter H558_RS03970 PF02659 Putative manganese efflux pump H558_RS03975 PF01613 Flavin reductase like domain H558_RS03985 PF01063 Amino-transferase class IV H558_RS03990 PF07690 Major Facilitator Superfamily H558_RS04010 PF05666 Fels-1 Prophage Protein-like H558_RS04015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS04015 PF00005 ABC transporter H558_RS04020 PF00005 ABC transporter H558_RS04020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS04025 PF12911 N-terminal TM domain of oligopeptide transport permease C H558_RS04030 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS04035 PF01266 FAD dependent oxidoreductase H558_RS04050 PF01266 FAD dependent oxidoreductase H558_RS04060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H558_RS04070 PF02798 Glutathione S-transferase, N-terminal domain H558_RS04085 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase H558_RS04090 PF05199 GMC oxidoreductase H558_RS04090 PF00732 GMC oxidoreductase H558_RS04095 PF00034 Cytochrome c H558_RS04095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H558_RS04100 PF08281 Sigma-70, region 4 H558_RS04100 PF04542 Sigma-70 region 2 H558_RS04110 PF00593 TonB dependent receptor H558_RS04110 PF07715 TonB-dependent Receptor Plug Domain H558_RS04125 PF00296 Luciferase-like monooxygenase H558_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS04140 PF00005 ABC transporter H558_RS04145 PF00005 ABC transporter H558_RS04160 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS04165 PF03466 LysR substrate binding domain H558_RS04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS04170 PF02515 CoA-transferase family III H558_RS04175 PF00378 Enoyl-CoA hydratase/isomerase H558_RS04180 PF00593 TonB dependent receptor H558_RS04180 PF07715 TonB-dependent Receptor Plug Domain H558_RS04195 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS04210 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS04215 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS04220 PF00005 ABC transporter H558_RS04230 PF03459 TOBE domain H558_RS04240 PF00005 ABC transporter H558_RS04245 PF00005 ABC transporter H558_RS04245 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS04250 PF02653 Branched-chain amino acid transport system / permease component H558_RS04250 PF11862 Domain of unknown function (DUF3382) H558_RS04260 PF01070 FMN-dependent dehydrogenase H558_RS04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS04280 PF03466 LysR substrate binding domain H558_RS04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS04285 PF03466 LysR substrate binding domain H558_RS04290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS04290 PF03466 LysR substrate binding domain H558_RS04295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H558_RS04295 PF13378 Enolase C-terminal domain-like H558_RS04300 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS04325 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS04330 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS04340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS04340 PF03466 LysR substrate binding domain H558_RS04350 PF01053 Cys/Met metabolism PLP-dependent enzyme H558_RS04355 PF13458 Periplasmic binding protein H558_RS04360 PF02653 Branched-chain amino acid transport system / permease component H558_RS04365 PF11862 Domain of unknown function (DUF3382) H558_RS04365 PF02653 Branched-chain amino acid transport system / permease component H558_RS04370 PF00005 ABC transporter H558_RS04370 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS04375 PF00005 ABC transporter H558_RS04390 PF00005 ABC transporter H558_RS04390 PF17760 UvrA interaction domain H558_RS04390 PF17755 UvrA DNA-binding domain H558_RS04395 PF00425 chorismate binding enzyme H558_RS04395 PF04715 Anthranilate synthase component I, N terminal region H558_RS04405 PF00899 ThiF family H558_RS04410 PF02321 Outer membrane efflux protein H558_RS04415 PF00005 ABC transporter H558_RS04415 PF12704 MacB-like periplasmic core domain H558_RS04415 PF02687 FtsX-like permease family H558_RS04420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H558_RS04435 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H558_RS04435 PF01243 Pyridoxamine 5'-phosphate oxidase H558_RS04440 PF01613 Flavin reductase like domain H558_RS04445 PF01266 FAD dependent oxidoreductase H558_RS04450 PF00551 Formyl transferase H558_RS04460 PF03466 LysR substrate binding domain H558_RS04460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS04465 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS04475 PF00206 Lyase H558_RS04475 PF10415 Fumarase C C-terminus H558_RS04480 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H558_RS04485 PF01520 N-acetylmuramoyl-L-alanine amidase H558_RS04485 PF11741 AMIN domain H558_RS04490 PF09335 SNARE associated Golgi protein H558_RS04495 PF08676 MutL C terminal dimerisation domain H558_RS04495 PF01119 DNA mismatch repair protein, C-terminal domain H558_RS04505 PF00586 AIR synthase related protein, N-terminal domain H558_RS04505 PF02769 AIR synthase related protein, C-terminal domain H558_RS04510 PF00308 Bacterial dnaA protein H558_RS04520 PF01743 Poly A polymerase head domain H558_RS04520 PF12627 Probable RNA and SrmB- binding site of polymerase A H558_RS04520 PF12626 Polymerase A arginine-rich C-terminus H558_RS04525 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H558_RS04535 PF01527 Transposase H558_RS04540 PF13683 Integrase core domain H558_RS04540 PF13276 HTH-like domain H558_RS04555 PF02515 CoA-transferase family III H558_RS04570 PF00378 Enoyl-CoA hydratase/isomerase H558_RS04575 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS04580 PF00392 Bacterial regulatory proteins, gntR family H558_RS04580 PF07702 UTRA domain H558_RS04585 PF00330 Aconitase family (aconitate hydratase) H558_RS04600 PF02091 Glycyl-tRNA synthetase alpha subunit H558_RS04605 PF02092 Glycyl-tRNA synthetase beta subunit H558_RS04605 PF05746 DALR anticodon binding domain H558_RS04615 PF01553 Acyltransferase H558_RS04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS04625 PF03466 LysR substrate binding domain H558_RS04640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H558_RS04645 PF01327 Polypeptide deformylase H558_RS04650 PF09317 Domain of unknown function (DUF1974) H558_RS04650 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS04650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS04650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS04655 PF07670 Nucleoside recognition H558_RS04660 PF00224 Pyruvate kinase, barrel domain H558_RS04660 PF02887 Pyruvate kinase, alpha/beta domain H558_RS04665 PF02595 Glycerate kinase family H558_RS04675 PF00398 Ribosomal RNA adenine dimethylase H558_RS04685 PF04453 LPS transport system D H558_RS04690 PF01636 Phosphotransferase enzyme family H558_RS04695 PF00483 Nucleotidyl transferase H558_RS04705 PF01329 Pterin 4 alpha carbinolamine dehydratase H558_RS04710 PF13488 Glycine zipper H558_RS04710 PF00691 OmpA family H558_RS04720 PF00248 Aldo/keto reductase family H558_RS04730 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS04735 PF13276 HTH-like domain H558_RS04735 PF13683 Integrase core domain H558_RS04740 PF01527 Transposase H558_RS04745 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H558_RS04745 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H558_RS04750 PF13091 PLD-like domain H558_RS04755 PF00484 Carbonic anhydrase H558_RS04775 PF12146 Serine aminopeptidase, S33 H558_RS04785 PF02426 Muconolactone delta-isomerase H558_RS04790 PF01144 Coenzyme A transferase H558_RS04795 PF01144 Coenzyme A transferase H558_RS04800 PF09339 IclR helix-turn-helix domain H558_RS04800 PF01614 Bacterial transcriptional regulator H558_RS04810 PF02667 Short chain fatty acid transporter H558_RS04815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H558_RS04815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H558_RS04820 PF03797 Autotransporter beta-domain H558_RS04820 PF00082 Subtilase family H558_RS04825 PF00311 Phosphoenolpyruvate carboxylase H558_RS04830 PF06508 Queuosine biosynthesis protein QueC H558_RS04840 PF03466 LysR substrate binding domain H558_RS04840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS04845 PF00920 Dehydratase family H558_RS04850 PF00356 Bacterial regulatory proteins, lacI family H558_RS04875 PF13649 Methyltransferase domain H558_RS04890 PF04055 Radical SAM superfamily H558_RS04905 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS04905 PF01610 Transposase H558_RS04905 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS04915 PF01527 Transposase H558_RS04920 PF13276 HTH-like domain H558_RS04920 PF13683 Integrase core domain H558_RS04930 PF02441 Flavoprotein H558_RS04935 PF00462 Glutaredoxin H558_RS04940 PF05175 Methyltransferase small domain H558_RS04940 PF17827 PrmC N-terminal domain H558_RS04945 PF00472 RF-1 domain H558_RS04945 PF03462 PCRF domain H558_RS04950 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H558_RS04950 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H558_RS04950 PF01488 Shikimate / quinate 5-dehydrogenase H558_RS04965 PF16220 Domain of unknown function (DUF4880) H558_RS04965 PF04773 FecR protein H558_RS04970 PF00593 TonB dependent receptor H558_RS04970 PF07715 TonB-dependent Receptor Plug Domain H558_RS04975 PF13533 Biotin-lipoyl like H558_RS04980 PF13533 Biotin-lipoyl like H558_RS04985 PF00873 AcrB/AcrD/AcrF family H558_RS05000 PF01740 STAS domain H558_RS05000 PF00916 Sulfate permease family H558_RS05005 PF13378 Enolase C-terminal domain-like H558_RS05005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H558_RS05010 PF00775 Dioxygenase H558_RS05010 PF04444 Catechol dioxygenase N terminus H558_RS05015 PF07690 Major Facilitator Superfamily H558_RS05020 PF00106 short chain dehydrogenase H558_RS05030 PF07715 TonB-dependent Receptor Plug Domain H558_RS05030 PF00593 TonB dependent receptor H558_RS05040 PF04542 Sigma-70 region 2 H558_RS05040 PF08281 Sigma-70, region 4 H558_RS05055 PF00348 Polyprenyl synthetase H558_RS05060 PF00829 Ribosomal prokaryotic L21 protein H558_RS05065 PF01016 Ribosomal L27 protein H558_RS05070 PF01926 50S ribosome-binding GTPase H558_RS05070 PF01018 GTP1/OBG H558_RS05075 PF00696 Amino acid kinase family H558_RS05075 PF01472 PUA domain H558_RS05090 PF02355 Protein export membrane protein H558_RS05090 PF07549 SecD/SecF GG Motif H558_RS05095 PF01964 Radical SAM ThiC family H558_RS05095 PF13667 ThiC-associated domain H558_RS05100 PF01610 Transposase H558_RS05100 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS05100 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS05105 PF03466 LysR substrate binding domain H558_RS05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS05110 PF03741 Integral membrane protein TerC family H558_RS05115 PF01565 FAD binding domain H558_RS05115 PF02913 FAD linked oxidases, C-terminal domain H558_RS05125 PF00899 ThiF family H558_RS05130 PF13180 PDZ domain H558_RS05130 PF03572 Peptidase family S41 H558_RS05135 PF01551 Peptidase family M23 H558_RS05140 PF00300 Histidine phosphatase superfamily (branch 1) H558_RS05150 PF00462 Glutaredoxin H558_RS05155 PF02556 Preprotein translocase subunit SecB H558_RS05160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H558_RS05160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H558_RS05165 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS05170 PF00588 SpoU rRNA Methylase family H558_RS05180 PF08241 Methyltransferase domain H558_RS05185 PF04107 Glutamate-cysteine ligase family 2(GCS2) H558_RS05190 PF02386 Cation transport protein H558_RS05200 PF02954 Bacterial regulatory protein, Fis family H558_RS05200 PF00072 Response regulator receiver domain H558_RS05200 PF00158 Sigma-54 interaction domain H558_RS05205 PF00672 HAMP domain H558_RS05205 PF00512 His Kinase A (phospho-acceptor) domain H558_RS05205 PF00989 PAS fold H558_RS05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS05215 PF01189 16S rRNA methyltransferase RsmB/F H558_RS05215 PF01029 NusB family H558_RS05220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS05220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS05220 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS05225 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS05230 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS05230 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS05230 PF01610 Transposase H558_RS05245 PF00501 AMP-binding enzyme H558_RS05245 PF13193 AMP-binding enzyme C-terminal domain H558_RS05250 PF07702 UTRA domain H558_RS05250 PF00392 Bacterial regulatory proteins, gntR family H558_RS05265 PF03466 LysR substrate binding domain H558_RS05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS05270 PF00171 Aldehyde dehydrogenase family H558_RS05290 PF13419 Haloacid dehalogenase-like hydrolase H558_RS05305 PF02911 Formyl transferase, C-terminal domain H558_RS05305 PF00551 Formyl transferase H558_RS05310 PF01327 Polypeptide deformylase H558_RS05315 PF00266 Aminotransferase class-V H558_RS05320 PF01037 Lrp/AsnC ligand binding domain H558_RS05325 PF04328 Selenoprotein, putative H558_RS05330 PF02554 Carbon starvation protein CstA H558_RS05330 PF13722 5TM C-terminal transporter carbon starvation CstA H558_RS05335 PF07730 Histidine kinase H558_RS05335 PF17200 Single Cache domain 2 H558_RS05340 PF00072 Response regulator receiver domain H558_RS05340 PF00196 Bacterial regulatory proteins, luxR family H558_RS05350 PF00682 HMGL-like H558_RS05360 PF00497 Bacterial extracellular solute-binding proteins, family 3 H558_RS05365 PF00155 Aminotransferase class I and II H558_RS05370 PF01168 Alanine racemase, N-terminal domain H558_RS05375 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS05380 PF00593 TonB dependent receptor H558_RS05380 PF07715 TonB-dependent Receptor Plug Domain H558_RS05390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS05390 PF03466 LysR substrate binding domain H558_RS05395 PF01810 LysE type translocator H558_RS05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS05400 PF03466 LysR substrate binding domain H558_RS05405 PF13458 Periplasmic binding protein H558_RS05415 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS05415 PF00005 ABC transporter H558_RS05420 PF00005 ABC transporter H558_RS05430 PF00501 AMP-binding enzyme H558_RS05435 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS05435 PF00005 ABC transporter H558_RS05440 PF02653 Branched-chain amino acid transport system / permease component H558_RS05455 PF00005 ABC transporter H558_RS05460 PF00501 AMP-binding enzyme H558_RS05460 PF14535 AMP-binding enzyme C-terminal domain H558_RS05470 PF04143 Sulphur transport H558_RS05480 PF00753 Metallo-beta-lactamase superfamily H558_RS05505 PF06965 Na+/H+ antiporter 1 H558_RS05515 PF01475 Ferric uptake regulator family H558_RS05520 PF02311 AraC-like ligand binding domain H558_RS05520 PF12833 Helix-turn-helix domain H558_RS05525 PF01048 Phosphorylase superfamily H558_RS05530 PF03167 Uracil DNA glycosylase superfamily H558_RS05535 PF00270 DEAD/DEAH box helicase H558_RS05535 PF00271 Helicase conserved C-terminal domain H558_RS05540 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS05540 PF01610 Transposase H558_RS05540 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS05550 PF12627 Probable RNA and SrmB- binding site of polymerase A H558_RS05550 PF01743 Poly A polymerase head domain H558_RS05555 PF14718 Soluble lytic murein transglycosylase L domain H558_RS05555 PF01464 Transglycosylase SLT domain H558_RS05560 PF01812 5-formyltetrahydrofolate cyclo-ligase family H558_RS05575 PF08379 Bacterial transglutaminase-like N-terminal region H558_RS05575 PF01841 Transglutaminase-like superfamily H558_RS05600 PF05114 Protein of unknown function (DUF692) H558_RS05610 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS05615 PF02219 Methylenetetrahydrofolate reductase H558_RS05620 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV H558_RS05625 PF05221 S-adenosyl-L-homocysteine hydrolase H558_RS05625 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain H558_RS05630 PF00534 Glycosyl transferases group 1 H558_RS05630 PF13439 Glycosyltransferase Family 4 H558_RS05645 PF00557 Metallopeptidase family M24 H558_RS05650 PF02773 S-adenosylmethionine synthetase, C-terminal domain H558_RS05650 PF00438 S-adenosylmethionine synthetase, N-terminal domain H558_RS05650 PF02772 S-adenosylmethionine synthetase, central domain H558_RS05660 PF03279 Bacterial lipid A biosynthesis acyltransferase H558_RS05665 PF01678 Diaminopimelate epimerase H558_RS05675 PF00589 Phage integrase family H558_RS05675 PF02899 Phage integrase, N-terminal SAM-like domain H558_RS05680 PF07715 TonB-dependent Receptor Plug Domain H558_RS05680 PF00593 TonB dependent receptor H558_RS05695 PF01297 Zinc-uptake complex component A periplasmic H558_RS05700 PF00950 ABC 3 transport family H558_RS05705 PF00005 ABC transporter H558_RS05710 PF01475 Ferric uptake regulator family H558_RS05715 PF02492 CobW/HypB/UreG, nucleotide-binding domain H558_RS05715 PF07683 Cobalamin synthesis protein cobW C-terminal domain H558_RS05720 PF01258 Prokaryotic dksA/traR C4-type zinc finger H558_RS05725 PF00227 Proteasome subunit H558_RS05730 PF07724 AAA domain (Cdc48 subfamily) H558_RS05730 PF00004 ATPase family associated with various cellular activities (AAA) H558_RS05740 PF01923 Cobalamin adenosyltransferase H558_RS05745 PF04055 Radical SAM superfamily H558_RS05745 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H558_RS05750 PF03099 Biotin/lipoate A/B protein ligase family H558_RS05755 PF04359 Protein of unknown function (DUF493) H558_RS05760 PF01063 Amino-transferase class IV H558_RS05765 PF00768 D-alanyl-D-alanine carboxypeptidase H558_RS05765 PF07943 Penicillin-binding protein 5, C-terminal domain H558_RS05785 PF00005 ABC transporter H558_RS05790 PF02405 Permease MlaE H558_RS05800 PF03309 Type III pantothenate kinase H558_RS05805 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H558_RS05805 PF00534 Glycosyl transferases group 1 H558_RS05810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H558_RS05815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H558_RS05820 PF00483 Nucleotidyl transferase H558_RS05825 PF04321 RmlD substrate binding domain H558_RS05830 PF16363 GDP-mannose 4,6 dehydratase H558_RS05845 PF07690 Major Facilitator Superfamily H558_RS05855 PF13091 PLD-like domain H558_RS05860 PF03372 Endonuclease/Exonuclease/phosphatase family H558_RS05865 PF00152 tRNA synthetases class II (D, K and N) H558_RS05865 PF01336 OB-fold nucleic acid binding domain H558_RS05865 PF02938 GAD domain H558_RS05885 PF00732 GMC oxidoreductase H558_RS05885 PF05199 GMC oxidoreductase H558_RS05895 PF00701 Dihydrodipicolinate synthetase family H558_RS05900 PF13185 GAF domain H558_RS05905 PF00155 Aminotransferase class I and II H558_RS05910 PF01040 UbiA prenyltransferase family H558_RS05920 PF00392 Bacterial regulatory proteins, gntR family H558_RS05920 PF07729 FCD domain H558_RS05925 PF01274 Malate synthase H558_RS05930 PF08402 TOBE domain H558_RS05930 PF00005 ABC transporter H558_RS05945 PF00512 His Kinase A (phospho-acceptor) domain H558_RS05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS05950 PF00072 Response regulator receiver domain H558_RS05950 PF00486 Transcriptional regulatory protein, C terminal H558_RS05960 PF00132 Bacterial transferase hexapeptide (six repeats) H558_RS05970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H558_RS05975 PF02350 UDP-N-acetylglucosamine 2-epimerase H558_RS05985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H558_RS05990 PF02397 Bacterial sugar transferase H558_RS05995 PF02719 Polysaccharide biosynthesis protein H558_RS06010 PF01131 DNA topoisomerase H558_RS06010 PF01751 Toprim domain H558_RS06015 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS06015 PF01610 Transposase H558_RS06015 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS06025 PF00005 ABC transporter H558_RS06040 PF00171 Aldehyde dehydrogenase family H558_RS06045 PF13276 HTH-like domain H558_RS06045 PF13683 Integrase core domain H558_RS06050 PF01527 Transposase H558_RS06065 PF01037 Lrp/AsnC ligand binding domain H558_RS06070 PF01062 Bestrophin, RFP-TM, chloride channel H558_RS06080 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS06080 PF01610 Transposase H558_RS06080 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS06085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H558_RS06090 PF13683 Integrase core domain H558_RS06090 PF13276 HTH-like domain H558_RS06095 PF13683 Integrase core domain H558_RS06095 PF13276 HTH-like domain H558_RS06100 PF01527 Transposase H558_RS06110 PF00563 EAL domain H558_RS06110 PF04940 Sensors of blue-light using FAD H558_RS06115 PF01751 Toprim domain H558_RS06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS06115 PF18053 DNA gyrase B subunit insert domain H558_RS06115 PF00986 DNA gyrase B subunit, carboxyl terminus H558_RS06115 PF00204 DNA gyrase B H558_RS06120 PF00712 DNA polymerase III beta subunit, N-terminal domain H558_RS06120 PF02768 DNA polymerase III beta subunit, C-terminal domain H558_RS06120 PF02767 DNA polymerase III beta subunit, central domain H558_RS06125 PF08299 Bacterial dnaA protein helix-turn-helix H558_RS06125 PF00308 Bacterial dnaA protein H558_RS06125 PF11638 DnaA N-terminal domain H558_RS06130 PF00468 Ribosomal protein L34 H558_RS06135 PF00825 Ribonuclease P H558_RS06140 PF01809 Putative membrane protein insertion efficiency factor H558_RS06145 PF14849 YidC periplasmic domain H558_RS06145 PF02096 60Kd inner membrane protein H558_RS06150 PF00141 Peroxidase H558_RS06155 PF01546 Peptidase family M20/M25/M40 H558_RS06155 PF07687 Peptidase dimerisation domain H558_RS06160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS06160 PF00005 ABC transporter H558_RS06165 PF00005 ABC transporter H558_RS06165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS06170 PF12911 N-terminal TM domain of oligopeptide transport permease C H558_RS06170 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS06180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H558_RS06185 PF10396 GTP-binding protein TrmE N-terminus H558_RS06185 PF01926 50S ribosome-binding GTPase H558_RS06185 PF12631 MnmE helical domain H558_RS06190 PF00326 Prolyl oligopeptidase family H558_RS06190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H558_RS06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS06195 PF03466 LysR substrate binding domain H558_RS06200 PF01515 Phosphate acetyl/butaryl transferase H558_RS06200 PF03949 Malic enzyme, NAD binding domain H558_RS06200 PF00390 Malic enzyme, N-terminal domain H558_RS06205 PF00486 Transcriptional regulatory protein, C terminal H558_RS06205 PF00072 Response regulator receiver domain H558_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS06210 PF00512 His Kinase A (phospho-acceptor) domain H558_RS06225 PF01970 Tripartite tricarboxylate transporter TctA family H558_RS06230 PF00155 Aminotransferase class I and II H558_RS06235 PF00313 'Cold-shock' DNA-binding domain H558_RS06240 PF13932 GidA associated domain H558_RS06240 PF01134 Glucose inhibited division protein A H558_RS06245 PF02527 rRNA small subunit methyltransferase G H558_RS06250 PF13614 AAA domain H558_RS06255 PF02195 ParB-like nuclease domain H558_RS06255 PF17762 HTH domain found in ParB protein H558_RS06260 PF00710 Asparaginase, N-terminal H558_RS06260 PF17763 Glutaminase/Asparaginase C-terminal domain H558_RS06280 PF00009 Elongation factor Tu GTP binding domain H558_RS06280 PF03144 Elongation factor Tu domain 2 H558_RS06280 PF03143 Elongation factor Tu C-terminal domain H558_RS06290 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H558_RS06295 PF02357 Transcription termination factor nusG H558_RS06295 PF00467 KOW motif H558_RS06300 PF00298 Ribosomal protein L11, RNA binding domain H558_RS06300 PF03946 Ribosomal protein L11, N-terminal domain H558_RS06305 PF00687 Ribosomal protein L1p/L10e family H558_RS06310 PF00466 Ribosomal protein L10 H558_RS06315 PF00542 Ribosomal protein L7/L12 C-terminal domain H558_RS06315 PF16320 Ribosomal protein L7/L12 dimerisation domain H558_RS06320 PF04565 RNA polymerase Rpb2, domain 3 H558_RS06320 PF10385 RNA polymerase beta subunit external 1 domain H558_RS06320 PF00562 RNA polymerase Rpb2, domain 6 H558_RS06320 PF04563 RNA polymerase beta subunit H558_RS06320 PF04561 RNA polymerase Rpb2, domain 2 H558_RS06320 PF04560 RNA polymerase Rpb2, domain 7 H558_RS06325 PF05000 RNA polymerase Rpb1, domain 4 H558_RS06325 PF04998 RNA polymerase Rpb1, domain 5 H558_RS06325 PF00623 RNA polymerase Rpb1, domain 2 H558_RS06325 PF04997 RNA polymerase Rpb1, domain 1 H558_RS06325 PF04983 RNA polymerase Rpb1, domain 3 H558_RS06365 PF00164 Ribosomal protein S12/S23 H558_RS06370 PF00177 Ribosomal protein S7p/S5e H558_RS06375 PF00679 Elongation factor G C-terminus H558_RS06375 PF14492 Elongation Factor G, domain II H558_RS06375 PF00009 Elongation factor Tu GTP binding domain H558_RS06375 PF03764 Elongation factor G, domain IV H558_RS06375 PF03144 Elongation factor Tu domain 2 H558_RS06380 PF03143 Elongation factor Tu C-terminal domain H558_RS06380 PF00009 Elongation factor Tu GTP binding domain H558_RS06380 PF03144 Elongation factor Tu domain 2 H558_RS06385 PF00338 Ribosomal protein S10p/S20e H558_RS06390 PF00297 Ribosomal protein L3 H558_RS06395 PF00573 Ribosomal protein L4/L1 family H558_RS06400 PF00276 Ribosomal protein L23 H558_RS06405 PF00181 Ribosomal Proteins L2, RNA binding domain H558_RS06405 PF03947 Ribosomal Proteins L2, C-terminal domain H558_RS06410 PF00203 Ribosomal protein S19 H558_RS06415 PF00237 Ribosomal protein L22p/L17e H558_RS06420 PF00189 Ribosomal protein S3, C-terminal domain H558_RS06420 PF07650 KH domain H558_RS06425 PF00252 Ribosomal protein L16p/L10e H558_RS06430 PF00831 Ribosomal L29 protein H558_RS06435 PF00366 Ribosomal protein S17 H558_RS06450 PF00005 ABC transporter H558_RS06460 PF00005 ABC transporter H558_RS06460 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS06480 PF00171 Aldehyde dehydrogenase family H558_RS06490 PF00238 Ribosomal protein L14p/L23e H558_RS06495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H558_RS06500 PF00281 Ribosomal protein L5 H558_RS06500 PF00673 ribosomal L5P family C-terminus H558_RS06505 PF00253 Ribosomal protein S14p/S29e H558_RS06510 PF00410 Ribosomal protein S8 H558_RS06515 PF00347 Ribosomal protein L6 H558_RS06520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H558_RS06525 PF00333 Ribosomal protein S5, N-terminal domain H558_RS06525 PF03719 Ribosomal protein S5, C-terminal domain H558_RS06530 PF00327 Ribosomal protein L30p/L7e H558_RS06535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H558_RS06540 PF00344 SecY translocase H558_RS06545 PF01176 Translation initiation factor 1A / IF-1 H558_RS06550 PF00444 Ribosomal protein L36 H558_RS06555 PF00416 Ribosomal protein S13/S18 H558_RS06560 PF00411 Ribosomal protein S11 H558_RS06565 PF00163 Ribosomal protein S4/S9 N-terminal domain H558_RS06565 PF01479 S4 domain H558_RS06570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H558_RS06570 PF01000 RNA polymerase Rpb3/RpoA insert domain H558_RS06570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H558_RS06575 PF01196 Ribosomal protein L17 H558_RS06580 PF01230 HIT domain H558_RS06585 PF03091 CutA1 divalent ion tolerance protein H558_RS06590 PF02683 Cytochrome C biogenesis protein transmembrane region H558_RS06590 PF11412 Disulphide bond corrector protein DsbC H558_RS06600 PF00490 Delta-aminolevulinic acid dehydratase H558_RS06605 PF01926 50S ribosome-binding GTPase H558_RS06610 PF00034 Cytochrome c H558_RS06615 PF05140 ResB-like family H558_RS06620 PF01578 Cytochrome C assembly protein H558_RS06625 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H558_RS06625 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H558_RS06630 PF01491 Frataxin-like domain H558_RS06635 PF00912 Transglycosylase H558_RS06635 PF00905 Penicillin binding protein transpeptidase domain H558_RS06635 PF17092 Penicillin-binding protein OB-like domain H558_RS06640 PF01202 Shikimate kinase H558_RS06645 PF01761 3-dehydroquinate synthase H558_RS06650 PF01966 HD domain H558_RS06650 PF13286 Phosphohydrolase-associated domain H558_RS06660 PF00043 Glutathione S-transferase, C-terminal domain H558_RS06660 PF13417 Glutathione S-transferase, N-terminal domain H558_RS06665 PF17755 UvrA DNA-binding domain H558_RS06665 PF17760 UvrA interaction domain H558_RS06670 PF07690 Major Facilitator Superfamily H558_RS06675 PF00436 Single-strand binding protein family H558_RS06680 PF01527 Transposase H558_RS06690 PF13683 Integrase core domain H558_RS06690 PF13276 HTH-like domain H558_RS06695 PF13537 Glutamine amidotransferase domain H558_RS06695 PF00733 Asparagine synthase H558_RS06730 PF00749 tRNA synthetases class I (E and Q), catalytic domain H558_RS06735 PF04361 Protein of unknown function (DUF494) H558_RS06740 PF00593 TonB dependent receptor H558_RS06740 PF07715 TonB-dependent Receptor Plug Domain H558_RS06750 PF16868 NMT1-like family H558_RS06755 PF14031 Putative serine dehydratase domain H558_RS06755 PF01168 Alanine racemase, N-terminal domain H558_RS06760 PF00202 Aminotransferase class-III H558_RS06775 PF01039 Carboxyl transferase domain H558_RS06780 PF02803 Thiolase, C-terminal domain H558_RS06780 PF00108 Thiolase, N-terminal domain H558_RS06785 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS06785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS06785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS06790 PF09278 MerR, DNA binding H558_RS06790 PF00376 MerR family regulatory protein H558_RS06800 PF01810 LysE type translocator H558_RS06805 PF01053 Cys/Met metabolism PLP-dependent enzyme H558_RS06810 PF00563 EAL domain H558_RS06810 PF12792 CSS motif domain associated with EAL H558_RS06815 PF00085 Thioredoxin H558_RS06815 PF01323 DSBA-like thioredoxin domain H558_RS06825 PF05746 DALR anticodon binding domain H558_RS06825 PF03485 Arginyl tRNA synthetase N terminal domain H558_RS06825 PF00750 tRNA synthetases class I (R) H558_RS06840 PF01425 Amidase H558_RS06845 PF08502 LeuA allosteric (dimerisation) domain H558_RS06845 PF00682 HMGL-like H558_RS06855 PF04963 Sigma-54 factor, core binding domain H558_RS06855 PF00309 Sigma-54 factor, Activator interacting domain (AID) H558_RS06855 PF04552 Sigma-54, DNA binding domain H558_RS06865 PF00892 EamA-like transporter family H558_RS06870 PF00210 Ferritin-like domain H558_RS06880 PF00171 Aldehyde dehydrogenase family H558_RS06895 PF01883 Iron-sulfur cluster assembly protein H558_RS06905 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS06905 PF14759 Reductase C-terminal H558_RS06910 PF00355 Rieske [2Fe-2S] domain H558_RS06915 PF02332 Methane/Phenol/Toluene Hydroxylase H558_RS06930 PF02332 Methane/Phenol/Toluene Hydroxylase H558_RS06930 PF04945 YHS domain H558_RS06950 PF02798 Glutathione S-transferase, N-terminal domain H558_RS06950 PF00043 Glutathione S-transferase, C-terminal domain H558_RS06955 PF16925 Tetracyclin repressor-like, C-terminal domain H558_RS06955 PF00440 Bacterial regulatory proteins, tetR family H558_RS06990 PF03144 Elongation factor Tu domain 2 H558_RS06990 PF00009 Elongation factor Tu GTP binding domain H558_RS06990 PF16658 Class II release factor RF3, C-terminal domain H558_RS06995 PF01810 LysE type translocator H558_RS07000 PF00270 DEAD/DEAH box helicase H558_RS07000 PF00271 Helicase conserved C-terminal domain H558_RS07010 PF04536 TPM domain H558_RS07015 PF01926 50S ribosome-binding GTPase H558_RS07015 PF12631 MnmE helical domain H558_RS07015 PF10396 GTP-binding protein TrmE N-terminus H558_RS07020 PF11067 Protein of unknown function (DUF2868) H558_RS07035 PF01425 Amidase H558_RS07045 PF04386 Stringent starvation protein B H558_RS07050 PF00043 Glutathione S-transferase, C-terminal domain H558_RS07050 PF02798 Glutathione S-transferase, N-terminal domain H558_RS07055 PF02167 Cytochrome C1 family H558_RS07060 PF00032 Cytochrome b(C-terminal)/b6/petD H558_RS07060 PF00033 Cytochrome b/b6/petB H558_RS07065 PF00355 Rieske [2Fe-2S] domain H558_RS07065 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H558_RS07070 PF01741 Large-conductance mechanosensitive channel, MscL H558_RS07075 PF01784 NIF3 (NGG1p interacting factor 3) H558_RS07080 PF13180 PDZ domain H558_RS07085 PF00902 Sec-independent protein translocase protein (TatC) H558_RS07090 PF02416 mttA/Hcf106 family H558_RS07095 PF02416 mttA/Hcf106 family H558_RS07105 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H558_RS07110 PF01502 Phosphoribosyl-AMP cyclohydrolase H558_RS07115 PF00977 Histidine biosynthesis protein H558_RS07120 PF00977 Histidine biosynthesis protein H558_RS07125 PF00117 Glutamine amidotransferase class-I H558_RS07130 PF00475 Imidazoleglycerol-phosphate dehydratase H558_RS07135 PF00155 Aminotransferase class I and II H558_RS07140 PF00815 Histidinol dehydrogenase H558_RS07145 PF01634 ATP phosphoribosyltransferase H558_RS07150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H558_RS07155 PF01722 BolA-like protein H558_RS07160 PF01061 ABC-2 type transporter H558_RS07165 PF00005 ABC transporter H558_RS07175 PF04333 MlaA lipoprotein H558_RS07180 PF02470 MlaD protein H558_RS07185 PF02405 Permease MlaE H558_RS07190 PF00005 ABC transporter H558_RS07195 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS07200 PF03922 OmpW family H558_RS07205 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS07205 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H558_RS07210 PF01645 Conserved region in glutamate synthase H558_RS07210 PF04898 Glutamate synthase central domain H558_RS07210 PF01493 GXGXG motif H558_RS07210 PF00310 Glutamine amidotransferases class-II H558_RS07215 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS07215 PF01610 Transposase H558_RS07215 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS07225 PF08240 Alcohol dehydrogenase GroES-like domain H558_RS07225 PF00107 Zinc-binding dehydrogenase H558_RS07230 PF00756 Putative esterase H558_RS07240 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H558_RS07240 PF03625 Domain of unknown function DUF302 H558_RS07245 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS07245 PF01610 Transposase H558_RS07245 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS07250 PF00140 Sigma-70 factor, region 1.2 H558_RS07250 PF04542 Sigma-70 region 2 H558_RS07250 PF04545 Sigma-70, region 4 H558_RS07255 PF00149 Calcineurin-like phosphoesterase H558_RS07265 PF00293 NUDIX domain H558_RS07270 PF01527 Transposase H558_RS07275 PF13683 Integrase core domain H558_RS07275 PF13276 HTH-like domain H558_RS07280 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H558_RS07280 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H558_RS07295 PF00115 Cytochrome C and Quinol oxidase polypeptide I H558_RS07305 PF00510 Cytochrome c oxidase subunit III H558_RS07325 PF02628 Cytochrome oxidase assembly protein H558_RS07330 PF01040 UbiA prenyltransferase family H558_RS07335 PF02630 SCO1/SenC H558_RS07355 PF00132 Bacterial transferase hexapeptide (six repeats) H558_RS07355 PF14602 Hexapeptide repeat of succinyl-transferase H558_RS07355 PF12804 MobA-like NTP transferase domain H558_RS07360 PF07690 Major Facilitator Superfamily H558_RS07365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H558_RS07365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H558_RS07365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H558_RS07375 PF01037 Lrp/AsnC ligand binding domain H558_RS07380 PF01380 SIS domain H558_RS07415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS07415 PF03466 LysR substrate binding domain H558_RS07420 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H558_RS07425 PF13378 Enolase C-terminal domain-like H558_RS07425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H558_RS07430 PF00701 Dihydrodipicolinate synthetase family H558_RS07435 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS07440 PF12411 Choline sulfatase enzyme C terminal H558_RS07440 PF00884 Sulfatase H558_RS07455 PF01527 Transposase H558_RS07460 PF13683 Integrase core domain H558_RS07460 PF13276 HTH-like domain H558_RS07465 PF01610 Transposase H558_RS07465 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS07465 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS07475 PF07969 Amidohydrolase family H558_RS07480 PF05995 Cysteine dioxygenase type I H558_RS07485 PF01070 FMN-dependent dehydrogenase H558_RS07490 PF00708 Acylphosphatase H558_RS07495 PF08361 MAATS-type transcriptional repressor, C-terminal region H558_RS07495 PF00440 Bacterial regulatory proteins, tetR family H558_RS07500 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS07510 PF01614 Bacterial transcriptional regulator H558_RS07510 PF09339 IclR helix-turn-helix domain H558_RS07520 PF13683 Integrase core domain H558_RS07520 PF13276 HTH-like domain H558_RS07525 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS07530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H558_RS07530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H558_RS07535 PF07470 Glycosyl Hydrolase Family 88 H558_RS07540 PF02515 CoA-transferase family III H558_RS07545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS07545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS07545 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS07550 PF02515 CoA-transferase family III H558_RS07560 PF08361 MAATS-type transcriptional repressor, C-terminal region H558_RS07560 PF00440 Bacterial regulatory proteins, tetR family H558_RS07565 PF03466 LysR substrate binding domain H558_RS07565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS07570 PF02627 Carboxymuconolactone decarboxylase family H558_RS07575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H558_RS07575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H558_RS07580 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS07585 PF03466 LysR substrate binding domain H558_RS07600 PF00920 Dehydratase family H558_RS07605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H558_RS07605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H558_RS07610 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS07610 PF14759 Reductase C-terminal H558_RS07620 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H558_RS07625 PF13609 Gram-negative porin H558_RS07630 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS07630 PF01610 Transposase H558_RS07630 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS07635 PF02548 Ketopantoate hydroxymethyltransferase H558_RS07640 PF00012 Hsp70 protein H558_RS07645 PF00990 Diguanylate cyclase, GGDEF domain H558_RS07645 PF00563 EAL domain H558_RS07645 PF03707 Bacterial signalling protein N terminal repeat H558_RS07650 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS07650 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS07650 PF01610 Transposase H558_RS07660 PF02805 Metal binding domain of Ada H558_RS07660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H558_RS07660 PF12833 Helix-turn-helix domain H558_RS07660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H558_RS07665 PF13532 2OG-Fe(II) oxygenase superfamily H558_RS07675 PF04463 Protein of unknown function (DUF523) H558_RS07680 PF01494 FAD binding domain H558_RS07685 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS07690 PF01047 MarR family H558_RS07695 PF00005 ABC transporter H558_RS07700 PF01032 FecCD transport family H558_RS07705 PF01497 Periplasmic binding protein H558_RS07710 PF05171 Haemin-degrading HemS.ChuX domain H558_RS07720 PF04773 FecR protein H558_RS07720 PF16220 Domain of unknown function (DUF4880) H558_RS07725 PF08281 Sigma-70, region 4 H558_RS07725 PF04542 Sigma-70 region 2 H558_RS07745 PF03061 Thioesterase superfamily H558_RS07755 PF00384 Molybdopterin oxidoreductase H558_RS07755 PF01568 Molydopterin dinucleotide binding domain H558_RS07755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H558_RS07760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H558_RS07760 PF00384 Molybdopterin oxidoreductase H558_RS07760 PF01568 Molydopterin dinucleotide binding domain H558_RS07765 PF13247 4Fe-4S dicluster domain H558_RS07765 PF09163 Formate dehydrogenase N, transmembrane H558_RS07770 PF01292 Prokaryotic cytochrome b561 H558_RS07775 PF04216 Protein involved in formate dehydrogenase formation H558_RS07780 PF03841 L-seryl-tRNA selenium transferase H558_RS07780 PF12390 Selenocysteine synthase N terminal H558_RS07785 PF09106 Elongation factor SelB, winged helix H558_RS07785 PF03144 Elongation factor Tu domain 2 H558_RS07785 PF00009 Elongation factor Tu GTP binding domain H558_RS07785 PF09107 Elongation factor SelB, winged helix H558_RS07795 PF00586 AIR synthase related protein, N-terminal domain H558_RS07795 PF02769 AIR synthase related protein, C-terminal domain H558_RS07810 PF01323 DSBA-like thioredoxin domain H558_RS07820 PF00218 Indole-3-glycerol phosphate synthase H558_RS07825 PF02885 Glycosyl transferase family, helical bundle domain H558_RS07825 PF00591 Glycosyl transferase family, a/b domain H558_RS07830 PF00117 Glutamine amidotransferase class-I H558_RS07835 PF04715 Anthranilate synthase component I, N terminal region H558_RS07835 PF00425 chorismate binding enzyme H558_RS07840 PF13419 Haloacid dehalogenase-like hydrolase H558_RS07845 PF00834 Ribulose-phosphate 3 epimerase family H558_RS07850 PF04379 ApaG domain H558_RS07855 PF06725 3D domain H558_RS07855 PF03562 MltA specific insert domain H558_RS07860 PF01494 FAD binding domain H558_RS07865 PF13098 Thioredoxin-like domain H558_RS07865 PF10411 Disulfide bond isomerase protein N-terminus H558_RS07870 PF01842 ACT domain H558_RS07870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H558_RS07870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H558_RS07875 PF01171 PP-loop family H558_RS07885 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS07895 PF00378 Enoyl-CoA hydratase/isomerase H558_RS07910 PF00119 ATP synthase A chain H558_RS07915 PF00137 ATP synthase subunit C H558_RS07920 PF00430 ATP synthase B/B' CF(0) H558_RS07925 PF00213 ATP synthase delta (OSCP) subunit H558_RS07930 PF00306 ATP synthase alpha/beta chain, C terminal domain H558_RS07930 PF02874 ATP synthase alpha/beta family, beta-barrel domain H558_RS07930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H558_RS07935 PF00231 ATP synthase H558_RS07940 PF02874 ATP synthase alpha/beta family, beta-barrel domain H558_RS07940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H558_RS07945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H558_RS07960 PF01208 Uroporphyrinogen decarboxylase (URO-D) H558_RS07965 PF18074 Primosomal protein N C-terminal domain H558_RS07965 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H558_RS07965 PF00270 DEAD/DEAH box helicase H558_RS07965 PF00271 Helicase conserved C-terminal domain H558_RS07965 PF17764 3′ DNA-binding domain (3′BD) H558_RS07970 PF13361 UvrD-like helicase C-terminal domain H558_RS07970 PF00580 UvrD/REP helicase N-terminal domain H558_RS07975 PF01546 Peptidase family M20/M25/M40 H558_RS07975 PF07687 Peptidase dimerisation domain H558_RS07985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS07985 PF00005 ABC transporter H558_RS07990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS07990 PF00005 ABC transporter H558_RS07995 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS07995 PF12911 N-terminal TM domain of oligopeptide transport permease C H558_RS08005 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H558_RS08020 PF01256 Carbohydrate kinase H558_RS08025 PF00378 Enoyl-CoA hydratase/isomerase H558_RS08030 PF00378 Enoyl-CoA hydratase/isomerase H558_RS08035 PF03060 Nitronate monooxygenase H558_RS08045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS08045 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS08045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS08050 PF02515 CoA-transferase family III H558_RS08055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H558_RS08055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H558_RS08055 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H558_RS08060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H558_RS08070 PF04262 Glutamate-cysteine ligase H558_RS08075 PF12146 Serine aminopeptidase, S33 H558_RS08075 PF12147 Putative methyltransferase H558_RS08095 PF02615 Malate/L-lactate dehydrogenase H558_RS08100 PF00561 alpha/beta hydrolase fold H558_RS08105 PF07021 Methionine biosynthesis protein MetW H558_RS08105 PF00561 alpha/beta hydrolase fold H558_RS08110 PF07690 Major Facilitator Superfamily H558_RS08115 PF13609 Gram-negative porin H558_RS08130 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H558_RS08130 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H558_RS08135 PF03372 Endonuclease/Exonuclease/phosphatase family H558_RS08140 PF00156 Phosphoribosyl transferase domain H558_RS08145 PF02934 GatB/GatE catalytic domain H558_RS08145 PF02637 GatB domain H558_RS08150 PF01425 Amidase H558_RS08155 PF02686 Glu-tRNAGln amidotransferase C subunit H558_RS08165 PF04085 rod shape-determining protein MreC H558_RS08175 PF03717 Penicillin-binding Protein dimerisation domain H558_RS08175 PF00905 Penicillin binding protein transpeptidase domain H558_RS08180 PF01098 Cell cycle protein H558_RS08185 PF02615 Malate/L-lactate dehydrogenase H558_RS08190 PF00939 Sodium:sulfate symporter transmembrane region H558_RS08195 PF00440 Bacterial regulatory proteins, tetR family H558_RS08205 PF00696 Amino acid kinase family H558_RS08210 PF03180 NLPA lipoprotein H558_RS08215 PF00578 AhpC/TSA family H558_RS08220 PF04972 BON domain H558_RS08225 PF13580 SIS domain H558_RS08230 PF02021 Uncharacterised protein family UPF0102 H558_RS08235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H558_RS08240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H558_RS08240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H558_RS08245 PF03330 Lytic transglycolase H558_RS08245 PF05036 Sporulation related domain H558_RS08250 PF03668 P-loop ATPase protein family H558_RS08260 PF00034 Cytochrome c H558_RS08260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H558_RS08265 PF07475 HPr Serine kinase C-terminal domain H558_RS08265 PF02603 HPr Serine kinase N terminus H558_RS08270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H558_RS08275 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H558_RS08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS08280 PF03466 LysR substrate binding domain H558_RS08285 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS08290 PF01546 Peptidase family M20/M25/M40 H558_RS08295 PF00005 ABC transporter H558_RS08315 PF01380 SIS domain H558_RS08315 PF00571 CBS domain H558_RS08320 PF02222 ATP-grasp domain H558_RS08325 PF07715 TonB-dependent Receptor Plug Domain H558_RS08325 PF00593 TonB dependent receptor H558_RS08335 PF01654 Cytochrome bd terminal oxidase subunit I H558_RS08340 PF02322 Cytochrome bd terminal oxidase subunit II H558_RS08345 PF08173 Membrane bound YbgT-like protein H558_RS08350 PF00664 ABC transporter transmembrane region H558_RS08350 PF00005 ABC transporter H558_RS08355 PF00005 ABC transporter H558_RS08355 PF00664 ABC transporter transmembrane region H558_RS08360 PF00156 Phosphoribosyl transferase domain H558_RS08365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS08365 PF03466 LysR substrate binding domain H558_RS08375 PF00585 C-terminal regulatory domain of Threonine dehydratase H558_RS08375 PF00291 Pyridoxal-phosphate dependent enzyme H558_RS08380 PF09335 SNARE associated Golgi protein H558_RS08390 PF00392 Bacterial regulatory proteins, gntR family H558_RS08390 PF07729 FCD domain H558_RS08395 PF03746 LamB/YcsF family H558_RS08400 PF02626 Carboxyltransferase domain, subdomain A and B H558_RS08405 PF02682 Carboxyltransferase domain, subdomain C and D H558_RS08415 PF03466 LysR substrate binding domain H558_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS08420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H558_RS08420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H558_RS08425 PF00512 His Kinase A (phospho-acceptor) domain H558_RS08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS08425 PF00989 PAS fold H558_RS08425 PF11808 Phosphate regulon sensor protein PhoR H558_RS08430 PF00486 Transcriptional regulatory protein, C terminal H558_RS08430 PF00072 Response regulator receiver domain H558_RS08435 PF01209 ubiE/COQ5 methyltransferase family H558_RS08450 PF01610 Transposase H558_RS08450 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS08450 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS08455 PF01061 ABC-2 type transporter H558_RS08460 PF00005 ABC transporter H558_RS08470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H558_RS08470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H558_RS08500 PF02397 Bacterial sugar transferase H558_RS08505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H558_RS08515 PF03109 ABC1 family H558_RS08520 PF01527 Transposase H558_RS08525 PF13276 HTH-like domain H558_RS08525 PF13683 Integrase core domain H558_RS08535 PF01467 Cytidylyltransferase-like H558_RS08540 PF02321 Outer membrane efflux protein H558_RS08550 PF08543 Phosphomethylpyrimidine kinase H558_RS08555 PF05690 Thiazole biosynthesis protein ThiG H558_RS08560 PF01497 Periplasmic binding protein H558_RS08565 PF00593 TonB dependent receptor H558_RS08565 PF07715 TonB-dependent Receptor Plug Domain H558_RS08570 PF07715 TonB-dependent Receptor Plug Domain H558_RS08570 PF00593 TonB dependent receptor H558_RS08575 PF02965 Vitamin B12 dependent methionine synthase, activation domain H558_RS08575 PF02574 Homocysteine S-methyltransferase H558_RS08575 PF02310 B12 binding domain H558_RS08575 PF02607 B12 binding domain H558_RS08575 PF00809 Pterin binding enzyme H558_RS08580 PF08241 Methyltransferase domain H558_RS08590 PF00730 HhH-GPD superfamily base excision DNA repair protein H558_RS08590 PF14815 NUDIX domain H558_RS08590 PF10576 Iron-sulfur binding domain of endonuclease III H558_RS08590 PF00633 Helix-hairpin-helix motif H558_RS08600 PF03975 CheD chemotactic sensory transduction H558_RS08605 PF18075 FtsX extracellular domain H558_RS08610 PF00005 ABC transporter H558_RS08615 PF00497 Bacterial extracellular solute-binding proteins, family 3 H558_RS08620 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS08625 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS08630 PF00005 ABC transporter H558_RS08635 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS08645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H558_RS08645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H558_RS08655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H558_RS08655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H558_RS08660 PF07690 Major Facilitator Superfamily H558_RS08670 PF02616 Segregation and condensation protein ScpA H558_RS08675 PF02569 Pantoate-beta-alanine ligase H558_RS08685 PF01478 Type IV leader peptidase family H558_RS08685 PF06750 Bacterial Peptidase A24 N-terminal domain H558_RS08690 PF01121 Dephospho-CoA kinase H558_RS08695 PF07072 Cell division protein H558_RS08700 PF13533 Biotin-lipoyl like H558_RS08705 PF00873 AcrB/AcrD/AcrF family H558_RS08710 PF00873 AcrB/AcrD/AcrF family H558_RS08715 PF02321 Outer membrane efflux protein H558_RS08720 PF16970 Type-1 fimbrial protein, A H558_RS08725 PF16970 Type-1 fimbrial protein, A H558_RS08735 PF00293 NUDIX domain H558_RS08745 PF01960 ArgJ family H558_RS08755 PF01047 MarR family H558_RS08770 PF02653 Branched-chain amino acid transport system / permease component H558_RS08775 PF11862 Domain of unknown function (DUF3382) H558_RS08775 PF02653 Branched-chain amino acid transport system / permease component H558_RS08780 PF00005 ABC transporter H558_RS08780 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS08785 PF00005 ABC transporter H558_RS08805 PF09345 Domain of unknown function (DUF1987) H558_RS08810 PF00990 Diguanylate cyclase, GGDEF domain H558_RS08815 PF01494 FAD binding domain H558_RS08820 PF00106 short chain dehydrogenase H558_RS08825 PF00378 Enoyl-CoA hydratase/isomerase H558_RS08830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS08830 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS08830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS08835 PF13193 AMP-binding enzyme C-terminal domain H558_RS08835 PF00501 AMP-binding enzyme H558_RS08855 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS08855 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS08855 PF01610 Transposase H558_RS08860 PF00202 Aminotransferase class-III H558_RS08865 PF02581 Thiamine monophosphate synthase H558_RS08870 PF08543 Phosphomethylpyrimidine kinase H558_RS08875 PF02622 Uncharacterized ACR, COG1678 H558_RS08880 PF03652 Holliday junction resolvase H558_RS08890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H558_RS08890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H558_RS08900 PF01553 Acyltransferase H558_RS08905 PF00149 Calcineurin-like phosphoesterase H558_RS08915 PF00912 Transglycosylase H558_RS08920 PF08501 Shikimate dehydrogenase substrate binding domain H558_RS08920 PF01488 Shikimate / quinate 5-dehydrogenase H558_RS08920 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H558_RS08930 PF00773 RNB domain H558_RS08940 PF08245 Mur ligase middle domain H558_RS08940 PF02875 Mur ligase family, glutamate ligase domain H558_RS08940 PF01225 Mur ligase family, catalytic domain H558_RS08945 PF00578 AhpC/TSA family H558_RS08950 PF01220 Dehydroquinase class II H558_RS08955 PF00364 Biotin-requiring enzyme H558_RS08960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H558_RS08960 PF00289 Biotin carboxylase, N-terminal domain H558_RS08960 PF02785 Biotin carboxylase C-terminal domain H558_RS08975 PF00294 pfkB family carbohydrate kinase H558_RS08995 PF03062 MBOAT, membrane-bound O-acyltransferase family H558_RS09000 PF00501 AMP-binding enzyme H558_RS09000 PF13193 AMP-binding enzyme C-terminal domain H558_RS09015 PF00268 Ribonucleotide reductase, small chain H558_RS09020 PF02867 Ribonucleotide reductase, barrel domain H558_RS09020 PF00317 Ribonucleotide reductase, all-alpha domain H558_RS09020 PF03477 ATP cone domain H558_RS09045 PF01037 Lrp/AsnC ligand binding domain H558_RS09060 PF00749 tRNA synthetases class I (E and Q), catalytic domain H558_RS09065 PF13607 Succinyl-CoA ligase like flavodoxin domain H558_RS09065 PF13380 CoA binding domain H558_RS09065 PF00583 Acetyltransferase (GNAT) family H558_RS09070 PF00005 ABC transporter H558_RS09075 PF00005 ABC transporter H558_RS09075 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS09080 PF11862 Domain of unknown function (DUF3382) H558_RS09080 PF02653 Branched-chain amino acid transport system / permease component H558_RS09090 PF02653 Branched-chain amino acid transport system / permease component H558_RS09105 PF00501 AMP-binding enzyme H558_RS09105 PF13193 AMP-binding enzyme C-terminal domain H558_RS09110 PF00171 Aldehyde dehydrogenase family H558_RS09120 PF01202 Shikimate kinase H558_RS09125 PF00378 Enoyl-CoA hydratase/isomerase H558_RS09135 PF00970 Oxidoreductase FAD-binding domain H558_RS09135 PF00037 4Fe-4S binding domain H558_RS09135 PF00175 Oxidoreductase NAD-binding domain H558_RS09140 PF02230 Phospholipase/Carboxylesterase H558_RS09145 PF04751 Protein of unknown function (DUF615) H558_RS09150 PF01523 Putative modulator of DNA gyrase H558_RS09155 PF00572 Ribosomal protein L13 H558_RS09160 PF00380 Ribosomal protein S9/S16 H558_RS09165 PF01118 Semialdehyde dehydrogenase, NAD binding domain H558_RS09165 PF02774 Semialdehyde dehydrogenase, dimerisation domain H558_RS09175 PF01521 Iron-sulphur cluster biosynthesis H558_RS09185 PF03702 Anhydro-N-acetylmuramic acid kinase H558_RS09190 PF01551 Peptidase family M23 H558_RS09190 PF01476 LysM domain H558_RS09195 PF01479 S4 domain H558_RS09195 PF00579 tRNA synthetases class I (W and Y) H558_RS09200 PF01161 Phosphatidylethanolamine-binding protein H558_RS09205 PF00464 Serine hydroxymethyltransferase H558_RS09210 PF03477 ATP cone domain H558_RS09215 PF01965 DJ-1/PfpI family H558_RS09225 PF01872 RibD C-terminal domain H558_RS09225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H558_RS09230 PF00677 Lumazine binding domain H558_RS09240 PF04285 Protein of unknown function (DUF444) H558_RS09245 PF04293 SpoVR like protein H558_RS09260 PF03466 LysR substrate binding domain H558_RS09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS09275 PF02627 Carboxymuconolactone decarboxylase family H558_RS09285 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS09285 PF01610 Transposase H558_RS09285 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS09290 PF08946 Osmosensory transporter coiled coil H558_RS09290 PF00083 Sugar (and other) transporter H558_RS09305 PF00206 Lyase H558_RS09305 PF14698 Argininosuccinate lyase C-terminal H558_RS09310 PF00582 Universal stress protein family H558_RS09320 PF00293 NUDIX domain H558_RS09320 PF09297 NADH pyrophosphatase zinc ribbon domain H558_RS09325 PF13360 PQQ-like domain H558_RS09345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H558_RS09345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H558_RS09350 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS09355 PF04391 Protein of unknown function (DUF533) H558_RS09360 PF00593 TonB dependent receptor H558_RS09360 PF07715 TonB-dependent Receptor Plug Domain H558_RS09375 PF01476 LysM domain H558_RS09375 PF01464 Transglycosylase SLT domain H558_RS09380 PF00753 Metallo-beta-lactamase superfamily H558_RS09380 PF16123 Hydroxyacylglutathione hydrolase C-terminus H558_RS09385 PF08241 Methyltransferase domain H558_RS09390 PF00075 RNase H H558_RS09395 PF13533 Biotin-lipoyl like H558_RS09400 PF00873 AcrB/AcrD/AcrF family H558_RS09405 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS09405 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS09405 PF01610 Transposase H558_RS09415 PF00929 Exonuclease H558_RS09425 PF01610 Transposase H558_RS09425 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS09425 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS09430 PF13533 Biotin-lipoyl like H558_RS09435 PF00005 ABC transporter H558_RS09445 PF02321 Outer membrane efflux protein H558_RS09455 PF00535 Glycosyl transferase family 2 H558_RS09460 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase H558_RS09470 PF12146 Serine aminopeptidase, S33 H558_RS09480 PF00892 EamA-like transporter family H558_RS09485 PF00155 Aminotransferase class I and II H558_RS09485 PF00392 Bacterial regulatory proteins, gntR family H558_RS09495 PF00582 Universal stress protein family H558_RS09500 PF01527 Transposase H558_RS09505 PF13276 HTH-like domain H558_RS09505 PF13683 Integrase core domain H558_RS09510 PF00679 Elongation factor G C-terminus H558_RS09510 PF03144 Elongation factor Tu domain 2 H558_RS09510 PF00009 Elongation factor Tu GTP binding domain H558_RS09510 PF03764 Elongation factor G, domain IV H558_RS09510 PF14492 Elongation Factor G, domain II H558_RS09535 PF00691 OmpA family H558_RS09540 PF07676 WD40-like Beta Propeller Repeat H558_RS09540 PF04052 TolB amino-terminal domain H558_RS09550 PF02472 Biopolymer transport protein ExbD/TolR H558_RS09555 PF01618 MotA/TolQ/ExbB proton channel family H558_RS09560 PF03061 Thioesterase superfamily H558_RS09565 PF04073 Aminoacyl-tRNA editing domain H558_RS09565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H558_RS09565 PF03129 Anticodon binding domain H558_RS09570 PF00293 NUDIX domain H558_RS09575 PF00486 Transcriptional regulatory protein, C terminal H558_RS09575 PF00072 Response regulator receiver domain H558_RS09580 PF00512 His Kinase A (phospho-acceptor) domain H558_RS09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS09590 PF01970 Tripartite tricarboxylate transporter TctA family H558_RS09595 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS09595 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS09595 PF01610 Transposase H558_RS09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS09600 PF03466 LysR substrate binding domain H558_RS09605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H558_RS09605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H558_RS09610 PF01610 Transposase H558_RS09610 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS09610 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS09615 PF01970 Tripartite tricarboxylate transporter TctA family H558_RS09645 PF01790 Prolipoprotein diacylglyceryl transferase H558_RS09650 PF00034 Cytochrome c H558_RS09655 PF01625 Peptide methionine sulfoxide reductase H558_RS09660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H558_RS09665 PF01037 Lrp/AsnC ligand binding domain H558_RS09700 PF01527 Transposase H558_RS09705 PF13276 HTH-like domain H558_RS09705 PF13683 Integrase core domain H558_RS09720 PF01546 Peptidase family M20/M25/M40 H558_RS09720 PF07687 Peptidase dimerisation domain H558_RS09725 PF01979 Amidohydrolase family H558_RS09730 PF00005 ABC transporter H558_RS09730 PF16326 ABC transporter C-terminal domain H558_RS09730 PF12848 ABC transporter H558_RS09740 PF02381 MraZ protein, putative antitoxin-like H558_RS09745 PF01795 MraW methylase family H558_RS09750 PF04999 Cell division protein FtsL H558_RS09755 PF03717 Penicillin-binding Protein dimerisation domain H558_RS09755 PF00905 Penicillin binding protein transpeptidase domain H558_RS09760 PF02875 Mur ligase family, glutamate ligase domain H558_RS09760 PF08245 Mur ligase middle domain H558_RS09765 PF00953 Glycosyl transferase family 4 H558_RS09770 PF08245 Mur ligase middle domain H558_RS09770 PF02875 Mur ligase family, glutamate ligase domain H558_RS09775 PF01098 Cell cycle protein H558_RS09780 PF03033 Glycosyltransferase family 28 N-terminal domain H558_RS09780 PF04101 Glycosyltransferase family 28 C-terminal domain H558_RS09785 PF01225 Mur ligase family, catalytic domain H558_RS09785 PF08245 Mur ligase middle domain H558_RS09785 PF02875 Mur ligase family, glutamate ligase domain H558_RS09790 PF07478 D-ala D-ala ligase C-terminus H558_RS09790 PF01820 D-ala D-ala ligase N-terminus H558_RS09795 PF03799 Cell division protein FtsQ H558_RS09795 PF08478 POTRA domain, FtsQ-type H558_RS09800 PF02491 SHS2 domain inserted in FTSA H558_RS09805 PF00091 Tubulin/FtsZ family, GTPase domain H558_RS09805 PF12327 FtsZ family, C-terminal domain H558_RS09810 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H558_RS09825 PF01551 Peptidase family M23 H558_RS09825 PF08525 Opacity-associated protein A N-terminal motif H558_RS09825 PF01476 LysM domain H558_RS09830 PF07516 SecA Wing and Scaffold domain H558_RS09830 PF02810 SEC-C motif H558_RS09830 PF01043 SecA preprotein cross-linking domain H558_RS09830 PF07517 SecA DEAD-like domain H558_RS09840 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS09840 PF01610 Transposase H558_RS09840 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS09845 PF13393 Histidyl-tRNA synthetase H558_RS09850 PF00709 Adenylosuccinate synthetase H558_RS09860 PF01165 Ribosomal protein S21 H558_RS09865 PF08278 DNA primase DnaG DnaB-binding H558_RS09865 PF10410 DnaB-helicase binding domain of primase H558_RS09865 PF08275 DNA primase catalytic core, N-terminal domain H558_RS09865 PF01807 CHC2 zinc finger H558_RS09870 PF04542 Sigma-70 region 2 H558_RS09870 PF03979 Sigma-70 factor, region 1.1 H558_RS09870 PF00140 Sigma-70 factor, region 1.2 H558_RS09870 PF04539 Sigma-70 region 3 H558_RS09870 PF04546 Sigma-70, non-essential region H558_RS09870 PF04545 Sigma-70, region 4 H558_RS09880 PF01527 Transposase H558_RS09885 PF13276 HTH-like domain H558_RS09885 PF13683 Integrase core domain H558_RS09910 PF07238 PilZ domain H558_RS09910 PF07317 Flagellar regulator YcgR H558_RS09930 PF03466 LysR substrate binding domain H558_RS09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS09940 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS09945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H558_RS09945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H558_RS09955 PF02142 MGS-like domain H558_RS09955 PF00781 Diacylglycerol kinase catalytic domain H558_RS09965 PF01569 PAP2 superfamily H558_RS09985 PF13609 Gram-negative porin H558_RS09990 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 H558_RS09995 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H558_RS10000 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H558_RS10005 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H558_RS10015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H558_RS10015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H558_RS10015 PF10531 SLBB domain H558_RS10020 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal H558_RS10020 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H558_RS10020 PF00384 Molybdopterin oxidoreductase H558_RS10025 PF00146 NADH dehydrogenase H558_RS10030 PF12838 4Fe-4S dicluster domain H558_RS10035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 H558_RS10040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H558_RS10045 PF00361 Proton-conducting membrane transporter H558_RS10045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H558_RS10050 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus H558_RS10050 PF00361 Proton-conducting membrane transporter H558_RS10055 PF00361 Proton-conducting membrane transporter H558_RS10070 PF03461 TRCF domain H558_RS10070 PF02559 CarD-like/TRCF domain H558_RS10070 PF00270 DEAD/DEAH box helicase H558_RS10070 PF17757 UvrB interaction domain H558_RS10070 PF00271 Helicase conserved C-terminal domain H558_RS10075 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H558_RS10080 PF02542 YgbB family H558_RS10085 PF01610 Transposase H558_RS10085 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10085 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10090 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10090 PF01610 Transposase H558_RS10090 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10095 PF02627 Carboxymuconolactone decarboxylase family H558_RS10100 PF00578 AhpC/TSA family H558_RS10110 PF00486 Transcriptional regulatory protein, C terminal H558_RS10110 PF00072 Response regulator receiver domain H558_RS10120 PF00814 Glycoprotease family H558_RS10125 PF03167 Uracil DNA glycosylase superfamily H558_RS10130 PF07690 Major Facilitator Superfamily H558_RS10135 PF06470 SMC proteins Flexible Hinge Domain H558_RS10135 PF02463 RecF/RecN/SMC N terminal domain H558_RS10145 PF00533 BRCA1 C Terminus (BRCT) domain H558_RS10145 PF01653 NAD-dependent DNA ligase adenylation domain H558_RS10145 PF12826 Helix-hairpin-helix motif H558_RS10145 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H558_RS10145 PF03120 NAD-dependent DNA ligase OB-fold domain H558_RS10150 PF00005 ABC transporter H558_RS10155 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS10160 PF00497 Bacterial extracellular solute-binding proteins, family 3 H558_RS10170 PF04279 Intracellular septation protein A H558_RS10175 PF01641 SelR domain H558_RS10180 PF00005 ABC transporter H558_RS10185 PF02361 Cobalt transport protein H558_RS10190 PF02632 BioY family H558_RS10205 PF00005 ABC transporter H558_RS10205 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS10210 PF00005 ABC transporter H558_RS10215 PF05506 Domain of unknown function (DUF756) H558_RS10215 PF04185 Phosphoesterase family H558_RS10220 PF01063 Amino-transferase class IV H558_RS10230 PF02653 Branched-chain amino acid transport system / permease component H558_RS10240 PF13683 Integrase core domain H558_RS10240 PF13276 HTH-like domain H558_RS10245 PF13276 HTH-like domain H558_RS10245 PF13683 Integrase core domain H558_RS10250 PF01527 Transposase H558_RS10255 PF00633 Helix-hairpin-helix motif H558_RS10255 PF00730 HhH-GPD superfamily base excision DNA repair protein H558_RS10255 PF10576 Iron-sulfur binding domain of endonuclease III H558_RS10260 PF04060 Putative Fe-S cluster H558_RS10270 PF00175 Oxidoreductase NAD-binding domain H558_RS10270 PF00970 Oxidoreductase FAD-binding domain H558_RS10275 PF11953 Domain of unknown function (DUF3470) H558_RS10275 PF00037 4Fe-4S binding domain H558_RS10280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H558_RS10280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H558_RS10285 PF01042 Endoribonuclease L-PSP H558_RS10295 PF06167 Glucose-regulated metallo-peptidase M90 H558_RS10300 PF02824 TGS domain H558_RS10300 PF04607 Region found in RelA / SpoT proteins H558_RS10300 PF13291 ACT domain H558_RS10305 PF07690 Major Facilitator Superfamily H558_RS10310 PF07687 Peptidase dimerisation domain H558_RS10310 PF01546 Peptidase family M20/M25/M40 H558_RS10315 PF00291 Pyridoxal-phosphate dependent enzyme H558_RS10320 PF00290 Tryptophan synthase alpha chain H558_RS10325 PF17848 Acetyl-coA carboxylase zinc finger domain H558_RS10325 PF01039 Carboxyl transferase domain H558_RS10330 PF09411 Lipid A 3-O-deacylase (PagL) H558_RS10335 PF01527 Transposase H558_RS10340 PF13683 Integrase core domain H558_RS10340 PF13276 HTH-like domain H558_RS10345 PF13683 Integrase core domain H558_RS10345 PF13276 HTH-like domain H558_RS10350 PF00575 S1 RNA binding domain H558_RS10350 PF12111 Polyribonucleotide phosphorylase C terminal H558_RS10350 PF10150 Ribonuclease E/G family H558_RS10355 PF00849 RNA pseudouridylate synthase H558_RS10355 PF01479 S4 domain H558_RS10360 PF13419 Haloacid dehalogenase-like hydrolase H558_RS10365 PF00174 Oxidoreductase molybdopterin binding domain H558_RS10370 PF01794 Ferric reductase like transmembrane component H558_RS10375 PF01510 N-acetylmuramoyl-L-alanine amidase H558_RS10380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H558_RS10385 PF02545 Maf-like protein H558_RS10390 PF02620 Large ribosomal RNA subunit accumulation protein YceD H558_RS10395 PF01783 Ribosomal L32p protein family H558_RS10400 PF02504 Fatty acid synthesis protein H558_RS10405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H558_RS10405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H558_RS10410 PF00698 Acyl transferase domain H558_RS10420 PF00550 Phosphopantetheine attachment site H558_RS10425 PF02801 Beta-ketoacyl synthase, C-terminal domain H558_RS10425 PF00109 Beta-ketoacyl synthase, N-terminal domain H558_RS10435 PF08281 Sigma-70, region 4 H558_RS10435 PF04542 Sigma-70 region 2 H558_RS10455 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10455 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10455 PF01610 Transposase H558_RS10460 PF01527 Transposase H558_RS10465 PF13683 Integrase core domain H558_RS10465 PF13276 HTH-like domain H558_RS10470 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10470 PF01610 Transposase H558_RS10470 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10480 PF03144 Elongation factor Tu domain 2 H558_RS10480 PF00679 Elongation factor G C-terminus H558_RS10480 PF00009 Elongation factor Tu GTP binding domain H558_RS10480 PF06421 GTP-binding protein LepA C-terminus H558_RS10485 PF10502 Signal peptidase, peptidase S26 H558_RS10490 PF00035 Double-stranded RNA binding motif H558_RS10490 PF14622 Ribonuclease-III-like H558_RS10495 PF01926 50S ribosome-binding GTPase H558_RS10495 PF07650 KH domain H558_RS10500 PF02565 Recombination protein O C terminal H558_RS10500 PF11967 Recombination protein O N terminal H558_RS10505 PF00990 Diguanylate cyclase, GGDEF domain H558_RS10505 PF00072 Response regulator receiver domain H558_RS10510 PF01610 Transposase H558_RS10510 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10510 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10515 PF01027 Inhibitor of apoptosis-promoting Bax1 H558_RS10530 PF00883 Cytosol aminopeptidase family, catalytic domain H558_RS10530 PF02789 Cytosol aminopeptidase family, N-terminal domain H558_RS10550 PF00171 Aldehyde dehydrogenase family H558_RS10555 PF03466 LysR substrate binding domain H558_RS10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS10560 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10560 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10560 PF01610 Transposase H558_RS10570 PF00877 NlpC/P60 family H558_RS10575 PF00501 AMP-binding enzyme H558_RS10575 PF13193 AMP-binding enzyme C-terminal domain H558_RS10575 PF16177 Acetyl-coenzyme A synthetase N-terminus H558_RS10580 PF03928 Haem-degrading H558_RS10590 PF13193 AMP-binding enzyme C-terminal domain H558_RS10590 PF00501 AMP-binding enzyme H558_RS10590 PF16177 Acetyl-coenzyme A synthetase N-terminus H558_RS10595 PF01610 Transposase H558_RS10595 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10595 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10605 PF01212 Beta-eliminating lyase H558_RS10625 PF01144 Coenzyme A transferase H558_RS10630 PF01144 Coenzyme A transferase H558_RS10640 PF01112 Asparaginase H558_RS10645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS10645 PF00005 ABC transporter H558_RS10650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H558_RS10655 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS10660 PF12911 N-terminal TM domain of oligopeptide transport permease C H558_RS10660 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS10665 PF03576 Peptidase family S58 H558_RS10680 PF06418 CTP synthase N-terminus H558_RS10680 PF00117 Glutamine amidotransferase class-I H558_RS10690 PF00113 Enolase, C-terminal TIM barrel domain H558_RS10690 PF03952 Enolase, N-terminal domain H558_RS10695 PF04977 Septum formation initiator H558_RS10705 PF01430 Hsp33 protein H558_RS10710 PF00132 Bacterial transferase hexapeptide (six repeats) H558_RS10715 PF16177 Acetyl-coenzyme A synthetase N-terminus H558_RS10715 PF00501 AMP-binding enzyme H558_RS10715 PF13193 AMP-binding enzyme C-terminal domain H558_RS10720 PF00149 Calcineurin-like phosphoesterase H558_RS10730 PF01610 Transposase H558_RS10730 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10730 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10735 PF13683 Integrase core domain H558_RS10735 PF13276 HTH-like domain H558_RS10740 PF01527 Transposase H558_RS10745 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10745 PF01610 Transposase H558_RS10745 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10755 PF02926 THUMP domain H558_RS10755 PF01170 Putative RNA methylase family UPF0020 H558_RS10760 PF03653 Uncharacterised protein family (UPF0093) H558_RS10765 PF03972 MmgE/PrpD family H558_RS10770 PF00285 Citrate synthase, C-terminal domain H558_RS10780 PF00056 lactate/malate dehydrogenase, NAD binding domain H558_RS10780 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H558_RS10785 PF07702 UTRA domain H558_RS10785 PF00392 Bacterial regulatory proteins, gntR family H558_RS10790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H558_RS10795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H558_RS10800 PF00890 FAD binding domain H558_RS10800 PF02910 Fumarate reductase flavoprotein C-term H558_RS10805 PF13085 2Fe-2S iron-sulfur cluster binding domain H558_RS10810 PF03937 Flavinator of succinate dehydrogenase H558_RS10815 PF00285 Citrate synthase, C-terminal domain H558_RS10820 PF01610 Transposase H558_RS10820 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10820 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS10825 PF03466 LysR substrate binding domain H558_RS10830 PF08402 TOBE domain H558_RS10830 PF00005 ABC transporter H558_RS10840 PF13419 Haloacid dehalogenase-like hydrolase H558_RS10845 PF13419 Haloacid dehalogenase-like hydrolase H558_RS10855 PF01266 FAD dependent oxidoreductase H558_RS10865 PF18331 PKHD-type hydroxylase C-terminal domain H558_RS10865 PF13640 2OG-Fe(II) oxygenase superfamily H558_RS10870 PF00593 TonB dependent receptor H558_RS10870 PF07715 TonB-dependent Receptor Plug Domain H558_RS10875 PF01610 Transposase H558_RS10875 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS10875 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS10880 PF01515 Phosphate acetyl/butaryl transferase H558_RS10880 PF00390 Malic enzyme, N-terminal domain H558_RS10880 PF03949 Malic enzyme, NAD binding domain H558_RS10885 PF00456 Transketolase, thiamine diphosphate binding domain H558_RS10885 PF17831 Pyruvate dehydrogenase E1 component middle domain H558_RS10890 PF03169 OPT oligopeptide transporter protein H558_RS10895 PF00676 Dehydrogenase E1 component H558_RS10895 PF16870 2-oxoglutarate dehydrogenase C-terminal H558_RS10895 PF02779 Transketolase, pyrimidine binding domain H558_RS10895 PF16078 2-oxoglutarate dehydrogenase N-terminus H558_RS10900 PF00364 Biotin-requiring enzyme H558_RS10900 PF02817 e3 binding domain H558_RS10900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H558_RS10905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H558_RS10905 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS10910 PF03969 AFG1-like ATPase H558_RS10915 PF08281 Sigma-70, region 4 H558_RS10915 PF04542 Sigma-70 region 2 H558_RS10925 PF07715 TonB-dependent Receptor Plug Domain H558_RS10925 PF00593 TonB dependent receptor H558_RS10940 PF00579 tRNA synthetases class I (W and Y) H558_RS10945 PF17674 HHH domain H558_RS10945 PF09371 Tex-like protein N-terminal domain H558_RS10945 PF16921 Tex protein YqgF-like domain H558_RS10945 PF00575 S1 RNA binding domain H558_RS10950 PF13307 Helicase C-terminal domain H558_RS10950 PF04851 Type III restriction enzyme, res subunit H558_RS10955 PF13525 Outer membrane lipoprotein H558_RS10960 PF00849 RNA pseudouridylate synthase H558_RS10960 PF01479 S4 domain H558_RS10965 PF02578 Multi-copper polyphenol oxidoreductase laccase H558_RS10970 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus H558_RS10975 PF00106 short chain dehydrogenase H558_RS10980 PF07879 PHB/PHA accumulation regulator DNA-binding domain H558_RS10980 PF05233 PHB accumulation regulatory domain H558_RS10985 PF10634 Fe2+ transport protein H558_RS10995 PF03239 Iron permease FTR1 family H558_RS11005 PF02567 Phenazine biosynthesis-like protein H558_RS11010 PF04972 BON domain H558_RS11015 PF01610 Transposase H558_RS11015 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11015 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11020 PF05532 CsbD-like H558_RS11025 PF01292 Prokaryotic cytochrome b561 H558_RS11040 PF00664 ABC transporter transmembrane region H558_RS11040 PF00005 ABC transporter H558_RS11055 PF04305 Protein of unknown function (DUF455) H558_RS11060 PF13406 Transglycosylase SLT domain H558_RS11070 PF00990 Diguanylate cyclase, GGDEF domain H558_RS11070 PF00072 Response regulator receiver domain H558_RS11085 PF09335 SNARE associated Golgi protein H558_RS11090 PF00171 Aldehyde dehydrogenase family H558_RS11110 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11110 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11110 PF01610 Transposase H558_RS11115 PF01527 Transposase H558_RS11120 PF13683 Integrase core domain H558_RS11120 PF13276 HTH-like domain H558_RS11125 PF01610 Transposase H558_RS11125 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11125 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11135 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS11140 PF14698 Argininosuccinate lyase C-terminal H558_RS11140 PF00206 Lyase H558_RS11145 PF03466 LysR substrate binding domain H558_RS11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS11150 PF07690 Major Facilitator Superfamily H558_RS11155 PF13419 Haloacid dehalogenase-like hydrolase H558_RS11165 PF00691 OmpA family H558_RS11170 PF03989 DNA gyrase C-terminal domain, beta-propeller H558_RS11170 PF00521 DNA gyrase/topoisomerase IV, subunit A H558_RS11175 PF00266 Aminotransferase class-V H558_RS11180 PF01842 ACT domain H558_RS11180 PF01817 Chorismate mutase type II H558_RS11180 PF00800 Prephenate dehydratase H558_RS11185 PF00155 Aminotransferase class I and II H558_RS11195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H558_RS11200 PF02224 Cytidylate kinase H558_RS11205 PF00575 S1 RNA binding domain H558_RS11210 PF00216 Bacterial DNA-binding protein H558_RS11220 PF18073 Rubredoxin metal binding domain H558_RS11225 PF00294 pfkB family carbohydrate kinase H558_RS11230 PF01370 NAD dependent epimerase/dehydratase family H558_RS11235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H558_RS11235 PF14579 Helix-hairpin-helix motif H558_RS11235 PF02811 PHP domain H558_RS11235 PF07733 Bacterial DNA polymerase III alpha NTPase domain H558_RS11240 PF00291 Pyridoxal-phosphate dependent enzyme H558_RS11245 PF13406 Transglycosylase SLT domain H558_RS11250 PF00850 Histone deacetylase domain H558_RS11255 PF01012 Electron transfer flavoprotein domain H558_RS11260 PF00766 Electron transfer flavoprotein FAD-binding domain H558_RS11260 PF01012 Electron transfer flavoprotein domain H558_RS11265 PF06826 Predicted Permease Membrane Region H558_RS11265 PF02080 TrkA-C domain H558_RS11270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS11270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS11270 PF12806 Acetyl-CoA dehydrogenase C-terminal like H558_RS11270 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS11275 PF00578 AhpC/TSA family H558_RS11275 PF10417 C-terminal domain of 1-Cys peroxiredoxin H558_RS11285 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS11290 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS11295 PF00005 ABC transporter H558_RS11295 PF17850 CysA C-terminal regulatory domain H558_RS11295 PF12857 TOBE-like domain H558_RS11300 PF01507 Phosphoadenosine phosphosulfate reductase family H558_RS11305 PF01507 Phosphoadenosine phosphosulfate reductase family H558_RS11310 PF00009 Elongation factor Tu GTP binding domain H558_RS11315 PF04055 Radical SAM superfamily H558_RS11325 PF01245 Ribosomal protein L19 H558_RS11330 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11330 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11330 PF01610 Transposase H558_RS11335 PF00293 NUDIX domain H558_RS11340 PF01261 Xylose isomerase-like TIM barrel H558_RS11345 PF03193 RsgA GTPase H558_RS11350 PF01435 Peptidase family M48 H558_RS11355 PF00929 Exonuclease H558_RS11360 PF03853 YjeF-related protein N-terminus H558_RS11365 PF08223 PaaX-like protein C-terminal domain H558_RS11365 PF07848 PaaX-like protein H558_RS11370 PF05138 Phenylacetic acid catabolic protein H558_RS11375 PF06243 Phenylacetic acid degradation B H558_RS11380 PF05138 Phenylacetic acid catabolic protein H558_RS11385 PF01883 Iron-sulfur cluster assembly protein H558_RS11390 PF00175 Oxidoreductase NAD-binding domain H558_RS11390 PF00111 2Fe-2S iron-sulfur cluster binding domain H558_RS11390 PF00970 Oxidoreductase FAD-binding domain H558_RS11395 PF00171 Aldehyde dehydrogenase family H558_RS11400 PF00378 Enoyl-CoA hydratase/isomerase H558_RS11405 PF03061 Thioesterase superfamily H558_RS11410 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11410 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11410 PF01610 Transposase H558_RS11425 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS11435 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H558_RS11435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H558_RS11445 PF03480 Bacterial extracellular solute-binding protein, family 7 H558_RS11455 PF01152 Bacterial-like globin H558_RS11465 PF13416 Bacterial extracellular solute-binding protein H558_RS11470 PF08402 TOBE domain H558_RS11470 PF00005 ABC transporter H558_RS11475 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS11490 PF02245 Methylpurine-DNA glycosylase (MPG) H558_RS11500 PF02646 RmuC family H558_RS11510 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H558_RS11515 PF01895 PhoU domain H558_RS11520 PF04362 Bacterial Fe(2+) trafficking H558_RS11525 PF00696 Amino acid kinase family H558_RS11525 PF00583 Acetyltransferase (GNAT) family H558_RS11530 PF00270 DEAD/DEAH box helicase H558_RS11530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H558_RS11530 PF00271 Helicase conserved C-terminal domain H558_RS11530 PF04408 Helicase associated domain (HA2) H558_RS11530 PF11898 Domain of unknown function (DUF3418) H558_RS11540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H558_RS11540 PF07733 Bacterial DNA polymerase III alpha NTPase domain H558_RS11540 PF02811 PHP domain H558_RS11540 PF01336 OB-fold nucleic acid binding domain H558_RS11540 PF14579 Helix-hairpin-helix motif H558_RS11545 PF00534 Glycosyl transferases group 1 H558_RS11550 PF01522 Polysaccharide deacetylase H558_RS11555 PF00535 Glycosyl transferase family 2 H558_RS11585 PF00664 ABC transporter transmembrane region H558_RS11585 PF00005 ABC transporter H558_RS11590 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11590 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11590 PF01610 Transposase H558_RS11605 PF00107 Zinc-binding dehydrogenase H558_RS11605 PF08240 Alcohol dehydrogenase GroES-like domain H558_RS11610 PF01435 Peptidase family M48 H558_RS11620 PF00581 Rhodanese-like domain H558_RS11625 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11625 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11625 PF01610 Transposase H558_RS11645 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS11655 PF02609 Exonuclease VII small subunit H558_RS11660 PF00348 Polyprenyl synthetase H558_RS11665 PF02780 Transketolase, C-terminal domain H558_RS11665 PF02779 Transketolase, pyrimidine binding domain H558_RS11665 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H558_RS11670 PF02649 Type I GTP cyclohydrolase folE2 H558_RS11675 PF01250 Ribosomal protein S6 H558_RS11685 PF01084 Ribosomal protein S18 H558_RS11690 PF01281 Ribosomal protein L9, N-terminal domain H558_RS11690 PF03948 Ribosomal protein L9, C-terminal domain H558_RS11700 PF03796 DnaB-like helicase C terminal domain H558_RS11700 PF00772 DnaB-like helicase N terminal domain H558_RS11705 PF13593 SBF-like CPA transporter family (DUF4137) H558_RS11710 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H558_RS11715 PF02562 PhoH-like protein H558_RS11715 PF13638 PIN domain H558_RS11720 PF00578 AhpC/TSA family H558_RS11725 PF04430 Protein of unknown function (DUF498/DUF598) H558_RS11730 PF00155 Aminotransferase class I and II H558_RS11735 PF03447 Homoserine dehydrogenase, NAD binding domain H558_RS11735 PF01842 ACT domain H558_RS11735 PF00742 Homoserine dehydrogenase H558_RS11740 PF14821 Threonine synthase N terminus H558_RS11740 PF00291 Pyridoxal-phosphate dependent enzyme H558_RS11745 PF01527 Transposase H558_RS11750 PF13683 Integrase core domain H558_RS11750 PF13276 HTH-like domain H558_RS11755 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H558_RS11760 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H558_RS11760 PF11940 Domain of unknown function (DUF3458) Ig-like fold H558_RS11760 PF01433 Peptidase family M1 domain H558_RS11770 PF00816 H-NS histone family H558_RS11775 PF01523 Putative modulator of DNA gyrase H558_RS11780 PF00793 DAHP synthetase I family H558_RS11785 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11785 PF01610 Transposase H558_RS11785 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11795 PF13276 HTH-like domain H558_RS11795 PF13683 Integrase core domain H558_RS11800 PF01527 Transposase H558_RS11805 PF01565 FAD binding domain H558_RS11805 PF02913 FAD linked oxidases, C-terminal domain H558_RS11810 PF01565 FAD binding domain H558_RS11815 PF02754 Cysteine-rich domain H558_RS11815 PF13183 4Fe-4S dicluster domain H558_RS11820 PF02233 NAD(P) transhydrogenase beta subunit H558_RS11825 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H558_RS11830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H558_RS11830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H558_RS11835 PF01610 Transposase H558_RS11835 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS11835 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS11845 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS11850 PF03466 LysR substrate binding domain H558_RS11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS11860 PF01925 Sulfite exporter TauE/SafE H558_RS11865 PF13417 Glutathione S-transferase, N-terminal domain H558_RS11865 PF00043 Glutathione S-transferase, C-terminal domain H558_RS11870 PF00206 Lyase H558_RS11870 PF08328 Adenylosuccinate lyase C-terminal H558_RS11875 PF01322 Cytochrome C' H558_RS11885 PF01527 Transposase H558_RS11890 PF13276 HTH-like domain H558_RS11890 PF13683 Integrase core domain H558_RS11905 PF01594 AI-2E family transporter H558_RS11915 PF00990 Diguanylate cyclase, GGDEF domain H558_RS11925 PF13276 HTH-like domain H558_RS11925 PF13683 Integrase core domain H558_RS11930 PF01527 Transposase H558_RS11935 PF13936 Helix-turn-helix domain H558_RS11935 PF00665 Integrase core domain H558_RS11955 PF10017 Histidine-specific methyltransferase, SAM-dependent H558_RS11975 PF01645 Conserved region in glutamate synthase H558_RS11980 PF04143 Sulphur transport H558_RS11985 PF02040 Arsenical pump membrane protein H558_RS11990 PF03547 Membrane transport protein H558_RS11995 PF13673 Acetyltransferase (GNAT) domain H558_RS12015 PF17876 Cold shock domain H558_RS12015 PF08461 Ribonuclease R winged-helix domain H558_RS12015 PF00575 S1 RNA binding domain H558_RS12015 PF08206 Ribonuclease B OB domain H558_RS12015 PF00773 RNB domain H558_RS12020 PF08032 RNA 2'-O ribose methyltransferase substrate binding H558_RS12020 PF00588 SpoU rRNA Methylase family H558_RS12025 PF01053 Cys/Met metabolism PLP-dependent enzyme H558_RS12030 PF00216 Bacterial DNA-binding protein H558_RS12045 PF01618 MotA/TolQ/ExbB proton channel family H558_RS12050 PF02472 Biopolymer transport protein ExbD/TolR H558_RS12055 PF00072 Response regulator receiver domain H558_RS12055 PF00486 Transcriptional regulatory protein, C terminal H558_RS12060 PF00512 His Kinase A (phospho-acceptor) domain H558_RS12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS12060 PF08521 Two-component sensor kinase N-terminal H558_RS12065 PF02705 K+ potassium transporter H558_RS12080 PF01527 Transposase H558_RS12085 PF13276 HTH-like domain H558_RS12085 PF13683 Integrase core domain H558_RS12090 PF00764 Arginosuccinate synthase H558_RS12095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H558_RS12095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H558_RS12100 PF00202 Aminotransferase class-III H558_RS12110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H558_RS12110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H558_RS12125 PF07729 FCD domain H558_RS12125 PF00392 Bacterial regulatory proteins, gntR family H558_RS12140 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS12140 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS12140 PF01610 Transposase H558_RS12155 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS12160 PF03328 HpcH/HpaI aldolase/citrate lyase family H558_RS12165 PF01649 Ribosomal protein S20 H558_RS12185 PF13276 HTH-like domain H558_RS12185 PF13683 Integrase core domain H558_RS12190 PF13683 Integrase core domain H558_RS12190 PF13276 HTH-like domain H558_RS12195 PF01527 Transposase H558_RS12200 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS12200 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS12200 PF01610 Transposase H558_RS12205 PF00034 Cytochrome c H558_RS12210 PF05199 GMC oxidoreductase H558_RS12210 PF00732 GMC oxidoreductase H558_RS12220 PF03023 Lipid II flippase MurJ H558_RS12225 PF00106 short chain dehydrogenase H558_RS12230 PF05191 Adenylate kinase, active site lid H558_RS12235 PF02348 Cytidylyltransferase H558_RS12240 PF03966 Trm112p-like protein H558_RS12245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H558_RS12250 PF02472 Biopolymer transport protein ExbD/TolR H558_RS12255 PF01618 MotA/TolQ/ExbB proton channel family H558_RS12260 PF02601 Exonuclease VII, large subunit H558_RS12260 PF13742 OB-fold nucleic acid binding domain H558_RS12265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H558_RS12265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H558_RS12270 PF13276 HTH-like domain H558_RS12270 PF13683 Integrase core domain H558_RS12275 PF01527 Transposase H558_RS12280 PF00654 Voltage gated chloride channel H558_RS12285 PF00108 Thiolase, N-terminal domain H558_RS12285 PF02803 Thiolase, C-terminal domain H558_RS12295 PF00313 'Cold-shock' DNA-binding domain H558_RS12300 PF02617 ATP-dependent Clp protease adaptor protein ClpS H558_RS12310 PF00207 Alpha-2-macroglobulin family H558_RS12310 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain H558_RS12310 PF07703 Alpha-2-macroglobulin bait region domain H558_RS12310 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain H558_RS12310 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain H558_RS12310 PF17962 Bacterial macroglobulin domain 6 H558_RS12310 PF01835 MG2 domain H558_RS12310 PF11974 Bacterial alpha-2-macroglobulin MG3 domain H558_RS12315 PF00905 Penicillin binding protein transpeptidase domain H558_RS12315 PF06832 Penicillin-Binding Protein C-terminus Family H558_RS12315 PF00912 Transglycosylase H558_RS12320 PF10431 C-terminal, D2-small domain, of ClpB protein H558_RS12320 PF02861 Clp amino terminal domain, pathogenicity island component H558_RS12320 PF00004 ATPase family associated with various cellular activities (AAA) H558_RS12320 PF07724 AAA domain (Cdc48 subfamily) H558_RS12320 PF17871 AAA lid domain H558_RS12330 PF02470 MlaD protein H558_RS12340 PF01619 Proline dehydrogenase H558_RS12340 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H558_RS12340 PF14850 DNA-binding domain of Proline dehydrogenase H558_RS12340 PF00171 Aldehyde dehydrogenase family H558_RS12345 PF13458 Periplasmic binding protein H558_RS12350 PF02653 Branched-chain amino acid transport system / permease component H558_RS12355 PF11862 Domain of unknown function (DUF3382) H558_RS12355 PF02653 Branched-chain amino acid transport system / permease component H558_RS12360 PF00005 ABC transporter H558_RS12360 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS12365 PF00005 ABC transporter H558_RS12375 PF00909 Ammonium Transporter Family H558_RS12380 PF00543 Nitrogen regulatory protein P-II H558_RS12390 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS12390 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS12390 PF01610 Transposase H558_RS12395 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS12395 PF01610 Transposase H558_RS12395 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS12400 PF04380 Membrane fusogenic activity H558_RS12405 PF01078 Magnesium chelatase, subunit ChlI H558_RS12405 PF13335 Magnesium chelatase, subunit ChlI C-terminal H558_RS12410 PF01632 Ribosomal protein L35 H558_RS12415 PF00453 Ribosomal protein L20 H558_RS12420 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H558_RS12420 PF01409 tRNA synthetases class II core domain (F) H558_RS12425 PF03147 Ferredoxin-fold anticodon binding domain H558_RS12425 PF03484 tRNA synthetase B5 domain H558_RS12425 PF01588 Putative tRNA binding domain H558_RS12425 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H558_RS12425 PF03483 B3/4 domain H558_RS12430 PF00216 Bacterial DNA-binding protein H558_RS12460 PF07729 FCD domain H558_RS12460 PF00392 Bacterial regulatory proteins, gntR family H558_RS12465 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS12470 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS12475 PF00180 Isocitrate/isopropylmalate dehydrogenase H558_RS12490 PF00313 'Cold-shock' DNA-binding domain H558_RS12500 PF02028 BCCT, betaine/carnitine/choline family transporter H558_RS12520 PF01037 Lrp/AsnC ligand binding domain H558_RS12570 PF00664 ABC transporter transmembrane region H558_RS12570 PF00005 ABC transporter H558_RS12575 PF00248 Aldo/keto reductase family H558_RS12580 PF01527 Transposase H558_RS12585 PF13276 HTH-like domain H558_RS12585 PF13683 Integrase core domain H558_RS12590 PF00248 Aldo/keto reductase family H558_RS12595 PF00248 Aldo/keto reductase family H558_RS12610 PF00149 Calcineurin-like phosphoesterase H558_RS12615 PF17092 Penicillin-binding protein OB-like domain H558_RS12615 PF00912 Transglycosylase H558_RS12615 PF00905 Penicillin binding protein transpeptidase domain H558_RS12620 PF00326 Prolyl oligopeptidase family H558_RS12635 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS12635 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS12635 PF01610 Transposase H558_RS12645 PF09424 Yqey-like protein H558_RS12650 PF00042 Globin H558_RS12650 PF00175 Oxidoreductase NAD-binding domain H558_RS12650 PF00970 Oxidoreductase FAD-binding domain H558_RS12655 PF02082 Transcriptional regulator H558_RS12660 PF01266 FAD dependent oxidoreductase H558_RS12665 PF05853 beta-keto acid cleavage enzyme H558_RS12670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H558_RS12670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H558_RS12675 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS12675 PF01610 Transposase H558_RS12675 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS12680 PF13193 AMP-binding enzyme C-terminal domain H558_RS12680 PF00501 AMP-binding enzyme H558_RS12695 PF00108 Thiolase, N-terminal domain H558_RS12695 PF02803 Thiolase, C-terminal domain H558_RS12700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H558_RS12700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H558_RS12700 PF00378 Enoyl-CoA hydratase/isomerase H558_RS12705 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H558_RS12710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H558_RS12710 PF00378 Enoyl-CoA hydratase/isomerase H558_RS12710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H558_RS12715 PF02803 Thiolase, C-terminal domain H558_RS12715 PF00108 Thiolase, N-terminal domain H558_RS12720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS12720 PF09317 Domain of unknown function (DUF1974) H558_RS12720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS12730 PF00132 Bacterial transferase hexapeptide (six repeats) H558_RS12740 PF02146 Sir2 family H558_RS12745 PF00459 Inositol monophosphatase family H558_RS12750 PF00171 Aldehyde dehydrogenase family H558_RS12755 PF00202 Aminotransferase class-III H558_RS12770 PF13361 UvrD-like helicase C-terminal domain H558_RS12770 PF00580 UvrD/REP helicase N-terminal domain H558_RS12775 PF01544 CorA-like Mg2+ transporter protein H558_RS12785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H558_RS12790 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS12795 PF12911 N-terminal TM domain of oligopeptide transport permease C H558_RS12795 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS12800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS12800 PF00005 ABC transporter H558_RS12810 PF02447 GntP family permease H558_RS12820 PF04172 LrgB-like family H558_RS12835 PF00210 Ferritin-like domain H558_RS12855 PF00072 Response regulator receiver domain H558_RS12860 PF06481 COX Aromatic Rich Motif H558_RS12860 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H558_RS12865 PF00115 Cytochrome C and Quinol oxidase polypeptide I H558_RS12870 PF00510 Cytochrome c oxidase subunit III H558_RS12875 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H558_RS12880 PF02678 Pirin H558_RS12880 PF05726 Pirin C-terminal cupin domain H558_RS12885 PF01527 Transposase H558_RS12890 PF13276 HTH-like domain H558_RS12890 PF13683 Integrase core domain H558_RS12895 PF13683 Integrase core domain H558_RS12895 PF13276 HTH-like domain H558_RS12900 PF05726 Pirin C-terminal cupin domain H558_RS12900 PF02678 Pirin H558_RS12910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H558_RS12910 PF08447 PAS fold H558_RS12910 PF13426 PAS domain H558_RS12915 PF01551 Peptidase family M23 H558_RS12915 PF01476 LysM domain H558_RS12925 PF04461 Protein of unknown function (DUF520) H558_RS12930 PF01425 Amidase H558_RS12940 PF08281 Sigma-70, region 4 H558_RS12940 PF04542 Sigma-70 region 2 H558_RS12955 PF00892 EamA-like transporter family H558_RS12960 PF00582 Universal stress protein family H558_RS12990 PF02634 FdhD/NarQ family H558_RS13000 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H558_RS13000 PF00037 4Fe-4S binding domain H558_RS13000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H558_RS13015 PF06463 Molybdenum Cofactor Synthesis C H558_RS13015 PF04055 Radical SAM superfamily H558_RS13020 PF12804 MobA-like NTP transferase domain H558_RS13025 PF03453 MoeA N-terminal region (domain I and II) H558_RS13025 PF00994 Probable molybdopterin binding domain H558_RS13025 PF03454 MoeA C-terminal region (domain IV) H558_RS13030 PF00994 Probable molybdopterin binding domain H558_RS13035 PF02391 MoaE protein H558_RS13045 PF01967 MoaC family H558_RS13050 PF01738 Dienelactone hydrolase family H558_RS13060 PF08534 Redoxin H558_RS13075 PF13545 Crp-like helix-turn-helix domain H558_RS13075 PF00027 Cyclic nucleotide-binding domain H558_RS13080 PF01168 Alanine racemase, N-terminal domain H558_RS13080 PF14031 Putative serine dehydratase domain H558_RS13085 PF10431 C-terminal, D2-small domain, of ClpB protein H558_RS13085 PF00004 ATPase family associated with various cellular activities (AAA) H558_RS13085 PF07724 AAA domain (Cdc48 subfamily) H558_RS13085 PF02861 Clp amino terminal domain, pathogenicity island component H558_RS13085 PF17871 AAA lid domain H558_RS13090 PF00175 Oxidoreductase NAD-binding domain H558_RS13090 PF00258 Flavodoxin H558_RS13090 PF00667 FAD binding domain H558_RS13095 PF02424 ApbE family H558_RS13120 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H558_RS13125 PF01593 Flavin containing amine oxidoreductase H558_RS13125 PF01593 Flavin containing amine oxidoreductase H558_RS13140 PF01168 Alanine racemase, N-terminal domain H558_RS13140 PF00842 Alanine racemase, C-terminal domain H558_RS13155 PF18073 Rubredoxin metal binding domain H558_RS13170 PF01554 MatE H558_RS13180 PF01197 Ribosomal protein L31 H558_RS13185 PF03301 Tryptophan 2,3-dioxygenase H558_RS13190 PF04199 Putative cyclase H558_RS13195 PF04002 RadC-like JAB domain H558_RS13205 PF02401 LytB protein H558_RS13210 PF14497 Glutathione S-transferase, C-terminal domain H558_RS13210 PF02798 Glutathione S-transferase, N-terminal domain H558_RS13240 PF03466 LysR substrate binding domain H558_RS13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS13250 PF04079 Segregation and condensation complex subunit ScpB H558_RS13255 PF00849 RNA pseudouridylate synthase H558_RS13255 PF01479 S4 domain H558_RS13260 PF17384 RimP C-terminal SH3 domain H558_RS13260 PF02576 RimP N-terminal domain H558_RS13265 PF13184 NusA-like KH domain H558_RS13265 PF08529 NusA N-terminal domain H558_RS13270 PF00009 Elongation factor Tu GTP binding domain H558_RS13270 PF04760 Translation initiation factor IF-2, N-terminal region H558_RS13270 PF11987 Translation-initiation factor 2 H558_RS13270 PF08364 Bacterial translation initiation factor IF-2 associated region H558_RS13275 PF02033 Ribosome-binding factor A H558_RS13280 PF16198 tRNA pseudouridylate synthase B C-terminal domain H558_RS13280 PF01509 TruB family pseudouridylate synthase (N terminal domain) H558_RS13285 PF03144 Elongation factor Tu domain 2 H558_RS13285 PF00679 Elongation factor G C-terminus H558_RS13285 PF00009 Elongation factor Tu GTP binding domain H558_RS13300 PF07729 FCD domain H558_RS13300 PF00392 Bacterial regulatory proteins, gntR family H558_RS13310 PF00378 Enoyl-CoA hydratase/isomerase H558_RS13315 PF13193 AMP-binding enzyme C-terminal domain H558_RS13315 PF00501 AMP-binding enzyme H558_RS13320 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS13325 PF00080 Copper/zinc superoxide dismutase (SODC) H558_RS13330 PF00248 Aldo/keto reductase family H558_RS13340 PF02653 Branched-chain amino acid transport system / permease component H558_RS13345 PF00005 ABC transporter H558_RS13355 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS13360 PF12857 TOBE-like domain H558_RS13360 PF00005 ABC transporter H558_RS13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS13365 PF03459 TOBE domain H558_RS13385 PF00529 HlyD membrane-fusion protein of T1SS H558_RS13385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H558_RS13390 PF00529 HlyD membrane-fusion protein of T1SS H558_RS13390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H558_RS13395 PF00873 AcrB/AcrD/AcrF family H558_RS13400 PF02321 Outer membrane efflux protein H558_RS13405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H558_RS13410 PF01648 4'-phosphopantetheinyl transferase superfamily H558_RS13415 PF00933 Glycosyl hydrolase family 3 N terminal domain H558_RS13420 PF08459 UvrC Helix-hairpin-helix N-terminal H558_RS13420 PF01541 GIY-YIG catalytic domain H558_RS13420 PF02151 UvrB/uvrC motif H558_RS13425 PF01066 CDP-alcohol phosphatidyltransferase H558_RS13435 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H558_RS13435 PF14489 QueF-like protein H558_RS13440 PF00463 Isocitrate lyase family H558_RS13445 PF01047 MarR family H558_RS13450 PF02566 OsmC-like protein H558_RS13455 PF00005 ABC transporter H558_RS13460 PF01061 ABC-2 type transporter H558_RS13465 PF01594 AI-2E family transporter H558_RS13470 PF00563 EAL domain H558_RS13470 PF00990 Diguanylate cyclase, GGDEF domain H558_RS13470 PF03707 Bacterial signalling protein N terminal repeat H558_RS13480 PF01958 Domain of unknown function DUF108 H558_RS13480 PF03447 Homoserine dehydrogenase, NAD binding domain H558_RS13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS13485 PF03466 LysR substrate binding domain H558_RS13490 PF07690 Major Facilitator Superfamily H558_RS13510 PF17185 NlpE C-terminal OB domain H558_RS13510 PF04170 NlpE N-terminal domain H558_RS13520 PF12843 Putative quorum-sensing-regulated virulence factor H558_RS13535 PF00293 NUDIX domain H558_RS13550 PF04055 Radical SAM superfamily H558_RS13550 PF06968 Biotin and Thiamin Synthesis associated domain H558_RS13575 PF00919 Uncharacterized protein family UPF0004 H558_RS13575 PF04055 Radical SAM superfamily H558_RS13575 PF01938 TRAM domain H558_RS13580 PF02562 PhoH-like protein H558_RS13585 PF02130 Uncharacterized protein family UPF0054 H558_RS13590 PF03471 Transporter associated domain H558_RS13590 PF00571 CBS domain H558_RS13595 PF00795 Carbon-nitrogen hydrolase H558_RS13600 PF00248 Aldo/keto reductase family H558_RS13620 PF02355 Protein export membrane protein H558_RS13620 PF07549 SecD/SecF GG Motif H558_RS13625 PF07549 SecD/SecF GG Motif H558_RS13625 PF02355 Protein export membrane protein H558_RS13625 PF13721 SecD export protein N-terminal TM region H558_RS13630 PF02699 Preprotein translocase subunit H558_RS13635 PF01702 Queuine tRNA-ribosyltransferase H558_RS13640 PF02547 Queuosine biosynthesis protein H558_RS13645 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family H558_RS13655 PF14824 Sirohaem biosynthesis protein central H558_RS13655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H558_RS13655 PF10414 Sirohaem synthase dimerisation region H558_RS13665 PF05957 Bacterial protein of unknown function (DUF883) H558_RS13680 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS13680 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS13680 PF01610 Transposase H558_RS13685 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H558_RS13690 PF01464 Transglycosylase SLT domain H558_RS13690 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H558_RS13695 PF00155 Aminotransferase class I and II H558_RS13705 PF00390 Malic enzyme, N-terminal domain H558_RS13705 PF01515 Phosphate acetyl/butaryl transferase H558_RS13705 PF03949 Malic enzyme, NAD binding domain H558_RS13720 PF04452 RNA methyltransferase H558_RS13725 PF02779 Transketolase, pyrimidine binding domain H558_RS13725 PF02780 Transketolase, C-terminal domain H558_RS13725 PF00456 Transketolase, thiamine diphosphate binding domain H558_RS13730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H558_RS13730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H558_RS13735 PF00162 Phosphoglycerate kinase H558_RS13740 PF00916 Sulfate permease family H558_RS13740 PF01740 STAS domain H558_RS13755 PF00871 Acetokinase family H558_RS13760 PF01515 Phosphate acetyl/butaryl transferase H558_RS13770 PF14834 Glutathione S-transferase, C-terminal domain H558_RS13770 PF02798 Glutathione S-transferase, N-terminal domain H558_RS13785 PF00226 DnaJ domain H558_RS13785 PF01556 DnaJ C terminal domain H558_RS13805 PF01384 Phosphate transporter family H558_RS13810 PF00994 Probable molybdopterin binding domain H558_RS13820 PF08525 Opacity-associated protein A N-terminal motif H558_RS13820 PF01551 Peptidase family M23 H558_RS13820 PF01476 LysM domain H558_RS13830 PF01176 Translation initiation factor 1A / IF-1 H558_RS13845 PF01970 Tripartite tricarboxylate transporter TctA family H558_RS13850 PF13276 HTH-like domain H558_RS13850 PF13683 Integrase core domain H558_RS13855 PF13683 Integrase core domain H558_RS13855 PF13276 HTH-like domain H558_RS13860 PF01527 Transposase H558_RS13865 PF01970 Tripartite tricarboxylate transporter TctA family H558_RS13875 PF00583 Acetyltransferase (GNAT) family H558_RS13880 PF00375 Sodium:dicarboxylate symporter family H558_RS13885 PF01116 Fructose-bisphosphate aldolase class-II H558_RS13890 PF01259 SAICAR synthetase H558_RS13895 PF00731 AIR carboxylase H558_RS13900 PF02222 ATP-grasp domain H558_RS13900 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H558_RS13905 PF03481 Putative GTP-binding controlling metal-binding H558_RS13905 PF01300 Telomere recombination H558_RS13915 PF00593 TonB dependent receptor H558_RS13915 PF07715 TonB-dependent Receptor Plug Domain H558_RS13935 PF00596 Class II Aldolase and Adducin N-terminal domain H558_RS13940 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS13945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS13945 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS13945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS13950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H558_RS13950 PF00205 Thiamine pyrophosphate enzyme, central domain H558_RS13950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H558_RS13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS13955 PF03466 LysR substrate binding domain H558_RS13960 PF00589 Phage integrase family H558_RS13960 PF02899 Phage integrase, N-terminal SAM-like domain H558_RS13965 PF04073 Aminoacyl-tRNA editing domain H558_RS13970 PF00768 D-alanyl-D-alanine carboxypeptidase H558_RS13980 PF00083 Sugar (and other) transporter H558_RS13990 PF13361 UvrD-like helicase C-terminal domain H558_RS13990 PF00580 UvrD/REP helicase N-terminal domain H558_RS13990 PF12705 PD-(D/E)XK nuclease superfamily H558_RS14000 PF12170 DNA polymerase III tau subunit V interacting with alpha H558_RS14000 PF12169 DNA polymerase III subunits gamma and tau domain III H558_RS14000 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H558_RS14005 PF02575 YbaB/EbfC DNA-binding family H558_RS14010 PF13662 Toprim domain H558_RS14010 PF02132 RecR protein H558_RS14025 PF00005 ABC transporter H558_RS14030 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS14035 PF00923 Transaldolase/Fructose-6-phosphate aldolase H558_RS14040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H558_RS14040 PF00117 Glutamine amidotransferase class-I H558_RS14045 PF02142 MGS-like domain H558_RS14045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H558_RS14045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H558_RS14060 PF00300 Histidine phosphatase superfamily (branch 1) H558_RS14065 PF03466 LysR substrate binding domain H558_RS14065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS14075 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS14090 PF00860 Permease family H558_RS14095 PF01381 Helix-turn-helix H558_RS14100 PF01610 Transposase H558_RS14100 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS14100 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS14105 PF03449 Transcription elongation factor, N-terminal H558_RS14105 PF01272 Transcription elongation factor, GreA/GreB, C-term H558_RS14110 PF01985 CRS1 / YhbY (CRM) domain H558_RS14115 PF01728 FtsJ-like methyltransferase H558_RS14120 PF06480 FtsH Extracellular H558_RS14120 PF01434 Peptidase family M41 H558_RS14120 PF17862 AAA+ lid domain H558_RS14120 PF00004 ATPase family associated with various cellular activities (AAA) H558_RS14125 PF00809 Pterin binding enzyme H558_RS14130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H558_RS14130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H558_RS14130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H558_RS14130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H558_RS14140 PF02541 Ppx/GppA phosphatase family H558_RS14145 PF13090 Polyphosphate kinase C-terminal domain 2 H558_RS14145 PF13089 Polyphosphate kinase N-terminal domain H558_RS14145 PF02503 Polyphosphate kinase middle domain H558_RS14145 PF17941 Polyphosphate kinase C-terminal domain 1 H558_RS14150 PF12849 PBP superfamily domain H558_RS14155 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS14160 PF00005 ABC transporter H558_RS14175 PF01527 Transposase H558_RS14180 PF13276 HTH-like domain H558_RS14180 PF13683 Integrase core domain H558_RS14185 PF01695 IstB-like ATP binding protein H558_RS14190 PF02796 Helix-turn-helix domain of resolvase H558_RS14190 PF00665 Integrase core domain H558_RS14195 PF01527 Transposase H558_RS14205 PF01527 Transposase H558_RS14210 PF13276 HTH-like domain H558_RS14210 PF13683 Integrase core domain H558_RS14230 PF00392 Bacterial regulatory proteins, gntR family H558_RS14230 PF00155 Aminotransferase class I and II H558_RS14265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H558_RS14265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H558_RS14270 PF04381 Putative exonuclease, RdgC H558_RS14280 PF00083 Sugar (and other) transporter H558_RS14280 PF08946 Osmosensory transporter coiled coil H558_RS14285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS14285 PF00512 His Kinase A (phospho-acceptor) domain H558_RS14290 PF00072 Response regulator receiver domain H558_RS14290 PF00486 Transcriptional regulatory protein, C terminal H558_RS14295 PF00154 recA bacterial DNA recombination protein H558_RS14300 PF02631 RecX family H558_RS14305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS14305 PF03466 LysR substrate binding domain H558_RS14310 PF08267 Cobalamin-independent synthase, N-terminal domain H558_RS14310 PF01717 Cobalamin-independent synthase, Catalytic domain H558_RS14315 PF01610 Transposase H558_RS14315 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS14315 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS14325 PF08442 ATP-grasp domain H558_RS14325 PF00549 CoA-ligase H558_RS14330 PF00549 CoA-ligase H558_RS14330 PF02629 CoA binding domain H558_RS14335 PF03741 Integral membrane protein TerC family H558_RS14340 PF03741 Integral membrane protein TerC family H558_RS14345 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H558_RS14345 PF03900 Porphobilinogen deaminase, C-terminal domain H558_RS14365 PF00719 Inorganic pyrophosphatase H558_RS14370 PF01557 Fumarylacetoacetate (FAA) hydrolase family H558_RS14385 PF02190 ATP-dependent protease La (LON) substrate-binding domain H558_RS14385 PF05362 Lon protease (S16) C-terminal proteolytic domain H558_RS14385 PF00004 ATPase family associated with various cellular activities (AAA) H558_RS14430 PF03958 Bacterial type II/III secretion system short domain H558_RS14430 PF00263 Bacterial type II and III secretion system protein H558_RS14440 PF01527 Transposase H558_RS14445 PF13276 HTH-like domain H558_RS14445 PF13683 Integrase core domain H558_RS14450 PF00437 Type II/IV secretion system protein H558_RS14470 PF01636 Phosphotransferase enzyme family H558_RS14475 PF01207 Dihydrouridine synthase (Dus) H558_RS14485 PF03631 Virulence factor BrkB H558_RS14495 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H558_RS14500 PF00486 Transcriptional regulatory protein, C terminal H558_RS14500 PF00072 Response regulator receiver domain H558_RS14505 PF00512 His Kinase A (phospho-acceptor) domain H558_RS14505 PF00672 HAMP domain H558_RS14505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS14510 PF00563 EAL domain H558_RS14510 PF03707 Bacterial signalling protein N terminal repeat H558_RS14510 PF00990 Diguanylate cyclase, GGDEF domain H558_RS14515 PF01264 Chorismate synthase H558_RS14520 PF01435 Peptidase family M48 H558_RS14525 PF00072 Response regulator receiver domain H558_RS14525 PF00196 Bacterial regulatory proteins, luxR family H558_RS14530 PF13683 Integrase core domain H558_RS14530 PF13276 HTH-like domain H558_RS14535 PF13683 Integrase core domain H558_RS14535 PF13276 HTH-like domain H558_RS14540 PF01527 Transposase H558_RS14550 PF00330 Aconitase family (aconitate hydratase) H558_RS14555 PF00694 Aconitase C-terminal domain H558_RS14560 PF01610 Transposase H558_RS14560 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS14560 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS14565 PF00180 Isocitrate/isopropylmalate dehydrogenase H558_RS14570 PF02774 Semialdehyde dehydrogenase, dimerisation domain H558_RS14570 PF01118 Semialdehyde dehydrogenase, NAD binding domain H558_RS14580 PF01416 tRNA pseudouridine synthase H558_RS14585 PF03480 Bacterial extracellular solute-binding protein, family 7 H558_RS14590 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H558_RS14600 PF13276 HTH-like domain H558_RS14600 PF00665 Integrase core domain H558_RS14600 PF13333 Integrase core domain H558_RS14605 PF01527 Transposase H558_RS14610 PF13276 HTH-like domain H558_RS14610 PF13683 Integrase core domain H558_RS14615 PF01527 Transposase H558_RS14630 PF06969 HemN C-terminal domain H558_RS14630 PF04055 Radical SAM superfamily H558_RS14635 PF00196 Bacterial regulatory proteins, luxR family H558_RS14635 PF00072 Response regulator receiver domain H558_RS14640 PF02824 TGS domain H558_RS14640 PF03129 Anticodon binding domain H558_RS14640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H558_RS14640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H558_RS14645 PF00707 Translation initiation factor IF-3, C-terminal domain H558_RS14645 PF05198 Translation initiation factor IF-3, N-terminal domain H558_RS14650 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H558_RS14650 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H558_RS14660 PF00381 PTS HPr component phosphorylation site H558_RS14665 PF05524 PEP-utilising enzyme, N-terminal H558_RS14665 PF02896 PEP-utilising enzyme, TIM barrel domain H558_RS14665 PF00391 PEP-utilising enzyme, mobile domain H558_RS14675 PF02566 OsmC-like protein H558_RS14690 PF00497 Bacterial extracellular solute-binding proteins, family 3 H558_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS14700 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS14710 PF00692 dUTPase H558_RS14735 PF03575 Peptidase family S51 H558_RS14740 PF01037 Lrp/AsnC ligand binding domain H558_RS14750 PF01527 Transposase H558_RS14755 PF13683 Integrase core domain H558_RS14755 PF13276 HTH-like domain H558_RS14760 PF13276 HTH-like domain H558_RS14760 PF13683 Integrase core domain H558_RS14765 PF04127 DNA / pantothenate metabolism flavoprotein H558_RS14765 PF02441 Flavoprotein H558_RS14770 PF01252 Signal peptidase (SPase) II H558_RS14775 PF06827 Zinc finger found in FPG and IleRS H558_RS14775 PF00133 tRNA synthetases class I (I, L, M and V) H558_RS14775 PF08264 Anticodon-binding domain of tRNA H558_RS14780 PF06574 FAD synthetase H558_RS14780 PF01687 Riboflavin kinase H558_RS14790 PF01029 NusB family H558_RS14790 PF01189 16S rRNA methyltransferase RsmB/F H558_RS14800 PF13276 HTH-like domain H558_RS14800 PF13683 Integrase core domain H558_RS14810 PF13361 UvrD-like helicase C-terminal domain H558_RS14810 PF00580 UvrD/REP helicase N-terminal domain H558_RS14815 PF07715 TonB-dependent Receptor Plug Domain H558_RS14820 PF00005 ABC transporter H558_RS14820 PF12848 ABC transporter H558_RS14825 PF05175 Methyltransferase small domain H558_RS14830 PF01546 Peptidase family M20/M25/M40 H558_RS14830 PF07687 Peptidase dimerisation domain H558_RS14835 PF00132 Bacterial transferase hexapeptide (six repeats) H558_RS14835 PF14602 Hexapeptide repeat of succinyl-transferase H558_RS14835 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H558_RS14840 PF00155 Aminotransferase class I and II H558_RS14860 PF01527 Transposase H558_RS14870 PF01527 Transposase H558_RS14875 PF01695 IstB-like ATP binding protein H558_RS14880 PF00665 Integrase core domain H558_RS14880 PF02796 Helix-turn-helix domain of resolvase H558_RS14885 PF13683 Integrase core domain H558_RS14885 PF13276 HTH-like domain H558_RS14900 PF01527 Transposase H558_RS14905 PF13683 Integrase core domain H558_RS14905 PF13276 HTH-like domain H558_RS14925 PF04185 Phosphoesterase family H558_RS14925 PF05506 Domain of unknown function (DUF756) H558_RS14930 PF07690 Major Facilitator Superfamily H558_RS14935 PF01610 Transposase H558_RS14935 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS14935 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS14940 PF03466 LysR substrate binding domain H558_RS14955 PF00795 Carbon-nitrogen hydrolase H558_RS14960 PF04102 SlyX H558_RS14970 PF00583 Acetyltransferase (GNAT) family H558_RS14975 PF05698 Bacterial trigger factor protein (TF) C-terminus H558_RS14995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H558_RS14995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H558_RS15000 PF00990 Diguanylate cyclase, GGDEF domain H558_RS15000 PF03707 Bacterial signalling protein N terminal repeat H558_RS15000 PF00563 EAL domain H558_RS15005 PF01557 Fumarylacetoacetate (FAA) hydrolase family H558_RS15020 PF00444 Ribosomal protein L36 H558_RS15025 PF03466 LysR substrate binding domain H558_RS15025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS15035 PF00005 ABC transporter H558_RS15040 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS15045 PF09084 NMT1/THI5 like H558_RS15055 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS15055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H558_RS15060 PF00364 Biotin-requiring enzyme H558_RS15060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H558_RS15060 PF02817 e3 binding domain H558_RS15065 PF17831 Pyruvate dehydrogenase E1 component middle domain H558_RS15065 PF00456 Transketolase, thiamine diphosphate binding domain H558_RS15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS15070 PF00512 His Kinase A (phospho-acceptor) domain H558_RS15070 PF00989 PAS fold H558_RS15075 PF00196 Bacterial regulatory proteins, luxR family H558_RS15075 PF00072 Response regulator receiver domain H558_RS15080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H558_RS15080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H558_RS15085 PF01432 Peptidase family M3 H558_RS15100 PF02630 SCO1/SenC H558_RS15110 PF02321 Outer membrane efflux protein H558_RS15115 PF00873 AcrB/AcrD/AcrF family H558_RS15120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H558_RS15120 PF00529 HlyD membrane-fusion protein of T1SS H558_RS15125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS15125 PF03466 LysR substrate binding domain H558_RS15130 PF00849 RNA pseudouridylate synthase H558_RS15130 PF01479 S4 domain H558_RS15135 PF04345 Chorismate lyase H558_RS15140 PF07690 Major Facilitator Superfamily H558_RS15145 PF07152 YaeQ protein H558_RS15150 PF01810 LysE type translocator H558_RS15155 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS15155 PF01610 Transposase H558_RS15155 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS15160 PF13458 Periplasmic binding protein H558_RS15165 PF00005 ABC transporter H558_RS15170 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS15170 PF01610 Transposase H558_RS15170 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS15175 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS15175 PF00005 ABC transporter H558_RS15185 PF11862 Domain of unknown function (DUF3382) H558_RS15185 PF02653 Branched-chain amino acid transport system / permease component H558_RS15190 PF02653 Branched-chain amino acid transport system / permease component H558_RS15195 PF03466 LysR substrate binding domain H558_RS15195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS15205 PF13291 ACT domain H558_RS15205 PF00291 Pyridoxal-phosphate dependent enzyme H558_RS15215 PF00291 Pyridoxal-phosphate dependent enzyme H558_RS15225 PF00013 KH domain H558_RS15225 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H558_RS15225 PF01138 3' exoribonuclease family, domain 1 H558_RS15225 PF00575 S1 RNA binding domain H558_RS15225 PF03725 3' exoribonuclease family, domain 2 H558_RS15230 PF00312 Ribosomal protein S15 H558_RS15245 PF01066 CDP-alcohol phosphatidyltransferase H558_RS15250 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H558_RS15250 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H558_RS15255 PF10369 Small subunit of acetolactate synthase H558_RS15260 PF00205 Thiamine pyrophosphate enzyme, central domain H558_RS15260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H558_RS15260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H558_RS15285 PF03883 Peroxide stress protein YaaA H558_RS15295 PF00106 short chain dehydrogenase H558_RS15310 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H558_RS15320 PF04183 IucA / IucC family H558_RS15320 PF06276 Ferric iron reductase FhuF-like transporter H558_RS15340 PF07690 Major Facilitator Superfamily H558_RS15345 PF07715 TonB-dependent Receptor Plug Domain H558_RS15345 PF00593 TonB dependent receptor H558_RS15345 PF07660 Secretin and TonB N terminus short domain H558_RS15350 PF01914 MarC family integral membrane protein H558_RS15360 PF13683 Integrase core domain H558_RS15360 PF13276 HTH-like domain H558_RS15365 PF13683 Integrase core domain H558_RS15365 PF13276 HTH-like domain H558_RS15370 PF01527 Transposase H558_RS15380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H558_RS15380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H558_RS15395 PF00593 TonB dependent receptor H558_RS15395 PF07715 TonB-dependent Receptor Plug Domain H558_RS15405 PF00593 TonB dependent receptor H558_RS15405 PF07715 TonB-dependent Receptor Plug Domain H558_RS15410 PF02308 MgtC family H558_RS15415 PF04286 Protein of unknown function (DUF445) H558_RS15425 PF08774 VRR-NUC domain H558_RS15425 PF18081 Fanconi anemia-associated nuclease SAP domain H558_RS15435 PF02735 Ku70/Ku80 beta-barrel domain H558_RS15440 PF01068 ATP dependent DNA ligase domain H558_RS15440 PF04679 ATP dependent DNA ligase C terminal region H558_RS15440 PF13298 DNA polymerase Ligase (LigD) H558_RS15445 PF00440 Bacterial regulatory proteins, tetR family H558_RS15450 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H558_RS15450 PF02321 Outer membrane efflux protein H558_RS15455 PF13533 Biotin-lipoyl like H558_RS15460 PF00005 ABC transporter H558_RS15475 PF00106 short chain dehydrogenase H558_RS15480 PF00582 Universal stress protein family H558_RS15485 PF07681 DoxX H558_RS15495 PF00578 AhpC/TSA family H558_RS15505 PF03960 ArsC family H558_RS15510 PF02515 CoA-transferase family III H558_RS15515 PF03441 FAD binding domain of DNA photolyase H558_RS15515 PF00875 DNA photolyase H558_RS15535 PF00255 Glutathione peroxidase H558_RS15550 PF03099 Biotin/lipoate A/B protein ligase family H558_RS15550 PF10437 Bacterial lipoate protein ligase C-terminus H558_RS15560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H558_RS15560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H558_RS15565 PF03737 Aldolase/RraA H558_RS15570 PF00491 Arginase family H558_RS15580 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS15585 PF00497 Bacterial extracellular solute-binding proteins, family 3 H558_RS15600 PF01026 TatD related DNase H558_RS15605 PF12169 DNA polymerase III subunits gamma and tau domain III H558_RS15605 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H558_RS15605 PF12170 DNA polymerase III tau subunit V interacting with alpha H558_RS15610 PF02223 Thymidylate kinase H558_RS15615 PF02618 YceG-like family H558_RS15620 PF01571 Aminomethyltransferase folate-binding domain H558_RS15625 PF02668 Taurine catabolism dioxygenase TauD, TfdA family H558_RS15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS15630 PF03466 LysR substrate binding domain H558_RS15635 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS15635 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS15635 PF01610 Transposase H558_RS15650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H558_RS15650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H558_RS15655 PF00378 Enoyl-CoA hydratase/isomerase H558_RS15660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS15660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS15660 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS15670 PF03658 RnfH family Ubiquitin H558_RS15680 PF01668 SmpB protein H558_RS15695 PF00990 Diguanylate cyclase, GGDEF domain H558_RS15705 PF01145 SPFH domain / Band 7 family H558_RS15715 PF00117 Glutamine amidotransferase class-I H558_RS15715 PF00958 GMP synthase C terminal domain H558_RS15720 PF00391 PEP-utilising enzyme, mobile domain H558_RS15720 PF02896 PEP-utilising enzyme, TIM barrel domain H558_RS15720 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H558_RS15725 PF03618 Kinase/pyrophosphorylase H558_RS15735 PF08032 RNA 2'-O ribose methyltransferase substrate binding H558_RS15735 PF00588 SpoU rRNA Methylase family H558_RS15740 PF01351 Ribonuclease HII H558_RS15745 PF02684 Lipid-A-disaccharide synthetase H558_RS15750 PF00132 Bacterial transferase hexapeptide (six repeats) H558_RS15750 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H558_RS15755 PF07977 FabA-like domain H558_RS15760 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H558_RS15760 PF14602 Hexapeptide repeat of succinyl-transferase H558_RS15760 PF00132 Bacterial transferase hexapeptide (six repeats) H558_RS15765 PF03938 Outer membrane protein (OmpH-like) H558_RS15770 PF07244 Surface antigen variable number repeat H558_RS15770 PF01103 Surface antigen H558_RS15775 PF02163 Peptidase family M50 H558_RS15775 PF17820 PDZ domain H558_RS15780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H558_RS15780 PF13288 DXP reductoisomerase C-terminal domain H558_RS15780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H558_RS15790 PF01255 Putative undecaprenyl diphosphate synthase H558_RS15795 PF01765 Ribosome recycling factor H558_RS15800 PF00696 Amino acid kinase family H558_RS15805 PF00889 Elongation factor TS H558_RS15810 PF00318 Ribosomal protein S2 H558_RS15815 PF00557 Metallopeptidase family M24 H558_RS15820 PF01842 ACT domain H558_RS15820 PF08335 GlnD PII-uridylyltransferase H558_RS15820 PF01966 HD domain H558_RS15820 PF01909 Nucleotidyltransferase domain H558_RS15835 PF00156 Phosphoribosyl transferase domain H558_RS15840 PF02674 Colicin V production protein H558_RS15850 PF02875 Mur ligase family, glutamate ligase domain H558_RS15850 PF08245 Mur ligase middle domain H558_RS15860 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS15865 PF02515 CoA-transferase family III H558_RS15870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS15870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS15870 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS15885 PF07195 Flagellar hook-associated protein 2 C-terminus H558_RS15885 PF02465 Flagellar hook-associated protein 2 N-terminus H558_RS15890 PF02561 Flagellar protein FliS H558_RS15895 PF05400 Flagellar protein FliT H558_RS15905 PF01312 FlhB HrpN YscU SpaS Family H558_RS15915 PF02049 Flagellar hook-basal body complex protein FliE H558_RS15920 PF08345 Flagellar M-ring protein C-terminal H558_RS15920 PF01514 Secretory protein of YscJ/FliF family H558_RS15925 PF14842 FliG N-terminal domain H558_RS15925 PF14841 FliG middle domain H558_RS15925 PF01706 FliG C-terminal domain H558_RS15930 PF02108 Flagellar assembly protein FliH H558_RS15950 PF03748 Flagellar basal body-associated protein FliL H558_RS15955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H558_RS15955 PF02154 Flagellar motor switch protein FliM H558_RS15960 PF16973 Flagellar motor switch protein FliN N-terminal H558_RS15960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H558_RS15965 PF04347 Flagellar biosynthesis protein, FliO H558_RS15970 PF00813 FliP family H558_RS15975 PF01313 Bacterial export proteins, family 3 H558_RS15980 PF01311 Bacterial export proteins, family 1 H558_RS15985 PF02203 Tar ligand binding domain homologue H558_RS15985 PF00672 HAMP domain H558_RS15985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H558_RS15995 PF01618 MotA/TolQ/ExbB proton channel family H558_RS16000 PF05280 Flagellar transcriptional activator (FlhC) H558_RS16005 PF05247 Flagellar transcriptional activator (FlhD) H558_RS16010 PF04539 Sigma-70 region 3 H558_RS16010 PF04545 Sigma-70, region 4 H558_RS16010 PF04542 Sigma-70 region 2 H558_RS16015 PF00669 Bacterial flagellin N-terminal helical region H558_RS16015 PF00700 Bacterial flagellin C-terminal helical region H558_RS16015 PF12445 Flagellin protein H558_RS16020 PF13683 Integrase core domain H558_RS16020 PF13276 HTH-like domain H558_RS16025 PF13276 HTH-like domain H558_RS16025 PF13683 Integrase core domain H558_RS16030 PF01527 Transposase H558_RS16040 PF00593 TonB dependent receptor H558_RS16040 PF07715 TonB-dependent Receptor Plug Domain H558_RS16050 PF00990 Diguanylate cyclase, GGDEF domain H558_RS16050 PF13185 GAF domain H558_RS16060 PF17676 LD-carboxypeptidase C-terminal domain H558_RS16060 PF02016 LD-carboxypeptidase N-terminal domain H558_RS16070 PF03971 Monomeric isocitrate dehydrogenase H558_RS16080 PF01970 Tripartite tricarboxylate transporter TctA family H558_RS16085 PF00005 ABC transporter H558_RS16090 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS16095 PF00497 Bacterial extracellular solute-binding proteins, family 3 H558_RS16115 PF00892 EamA-like transporter family H558_RS16120 PF00005 ABC transporter H558_RS16125 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS16125 PF00005 ABC transporter H558_RS16135 PF13458 Periplasmic binding protein H558_RS16140 PF12792 CSS motif domain associated with EAL H558_RS16140 PF00563 EAL domain H558_RS16160 PF03741 Integral membrane protein TerC family H558_RS16160 PF03471 Transporter associated domain H558_RS16165 PF00360 Phytochrome region H558_RS16165 PF00990 Diguanylate cyclase, GGDEF domain H558_RS16165 PF01590 GAF domain H558_RS16165 PF00563 EAL domain H558_RS16170 PF00072 Response regulator receiver domain H558_RS16170 PF00196 Bacterial regulatory proteins, luxR family H558_RS16175 PF00989 PAS fold H558_RS16175 PF00512 His Kinase A (phospho-acceptor) domain H558_RS16175 PF00497 Bacterial extracellular solute-binding proteins, family 3 H558_RS16175 PF00072 Response regulator receiver domain H558_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS16175 PF01627 Hpt domain H558_RS16190 PF01527 Transposase H558_RS16195 PF13683 Integrase core domain H558_RS16195 PF13276 HTH-like domain H558_RS16200 PF00282 Pyridoxal-dependent decarboxylase conserved domain H558_RS16205 PF06826 Predicted Permease Membrane Region H558_RS16205 PF02080 TrkA-C domain H558_RS16210 PF04343 Protein of unknown function, DUF488 H558_RS16215 PF00392 Bacterial regulatory proteins, gntR family H558_RS16215 PF07729 FCD domain H558_RS16220 PF03480 Bacterial extracellular solute-binding protein, family 7 H558_RS16230 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H558_RS16230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H558_RS16240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H558_RS16240 PF00205 Thiamine pyrophosphate enzyme, central domain H558_RS16240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H558_RS16250 PF00171 Aldehyde dehydrogenase family H558_RS16260 PF02666 Phosphatidylserine decarboxylase H558_RS16265 PF01070 FMN-dependent dehydrogenase H558_RS16270 PF03180 NLPA lipoprotein H558_RS16275 PF13683 Integrase core domain H558_RS16275 PF13276 HTH-like domain H558_RS16280 PF01527 Transposase H558_RS16285 PF00892 EamA-like transporter family H558_RS16290 PF07995 Glucose / Sorbosone dehydrogenase H558_RS16295 PF02798 Glutathione S-transferase, N-terminal domain H558_RS16295 PF00043 Glutathione S-transferase, C-terminal domain H558_RS16300 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS16300 PF01610 Transposase H558_RS16300 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS16305 PF01177 Asp/Glu/Hydantoin racemase H558_RS16310 PF00005 ABC transporter H558_RS16315 PF00005 ABC transporter H558_RS16315 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS16320 PF02653 Branched-chain amino acid transport system / permease component H558_RS16320 PF11862 Domain of unknown function (DUF3382) H558_RS16325 PF02653 Branched-chain amino acid transport system / permease component H558_RS16330 PF13458 Periplasmic binding protein H558_RS16335 PF02592 Putative vitamin uptake transporter H558_RS16340 PF14748 Pyrroline-5-carboxylate reductase dimerisation H558_RS16340 PF03807 NADP oxidoreductase coenzyme F420-dependent H558_RS16345 PF13416 Bacterial extracellular solute-binding protein H558_RS16350 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS16355 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS16360 PF00005 ABC transporter H558_RS16360 PF17912 MalK OB fold domain H558_RS16365 PF01610 Transposase H558_RS16365 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS16365 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS16370 PF13458 Periplasmic binding protein H558_RS16380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H558_RS16380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H558_RS16380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H558_RS16395 PF00534 Glycosyl transferases group 1 H558_RS16405 PF00005 ABC transporter H558_RS16430 PF00210 Ferritin-like domain H558_RS16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS16435 PF03466 LysR substrate binding domain H558_RS16440 PF00271 Helicase conserved C-terminal domain H558_RS16440 PF00270 DEAD/DEAH box helicase H558_RS16440 PF17191 RecG wedge domain H558_RS16445 PF01042 Endoribonuclease L-PSP H558_RS16455 PF01610 Transposase H558_RS16455 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS16455 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS16460 PF00970 Oxidoreductase FAD-binding domain H558_RS16460 PF00175 Oxidoreductase NAD-binding domain H558_RS16475 PF08402 TOBE domain H558_RS16475 PF00005 ABC transporter H558_RS16480 PF02678 Pirin H558_RS16480 PF05726 Pirin C-terminal cupin domain H558_RS16490 PF03466 LysR substrate binding domain H558_RS16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS16495 PF00158 Sigma-54 interaction domain H558_RS16495 PF00072 Response regulator receiver domain H558_RS16495 PF02954 Bacterial regulatory protein, Fis family H558_RS16500 PF00512 His Kinase A (phospho-acceptor) domain H558_RS16500 PF00989 PAS fold H558_RS16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H558_RS16505 PF00120 Glutamine synthetase, catalytic domain H558_RS16505 PF03951 Glutamine synthetase, beta-Grasp domain H558_RS16510 PF04055 Radical SAM superfamily H558_RS16510 PF06969 HemN C-terminal domain H558_RS16515 PF01725 Ham1 family H558_RS16520 PF00563 EAL domain H558_RS16520 PF00990 Diguanylate cyclase, GGDEF domain H558_RS16520 PF03707 Bacterial signalling protein N terminal repeat H558_RS16525 PF00672 HAMP domain H558_RS16525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H558_RS16525 PF02203 Tar ligand binding domain homologue H558_RS16530 PF01610 Transposase H558_RS16530 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS16530 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS16535 PF03466 LysR substrate binding domain H558_RS16535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS16540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H558_RS16540 PF02770 Acyl-CoA dehydrogenase, middle domain H558_RS16540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H558_RS16545 PF03972 MmgE/PrpD family H558_RS16555 PF03725 3' exoribonuclease family, domain 2 H558_RS16555 PF01138 3' exoribonuclease family, domain 1 H558_RS16560 PF03755 YicC-like family, N-terminal region H558_RS16560 PF08340 Domain of unknown function (DUF1732) H558_RS16570 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus H558_RS16570 PF01048 Phosphorylase superfamily H558_RS16575 PF00877 NlpC/P60 family H558_RS16585 PF00625 Guanylate kinase H558_RS16590 PF01192 RNA polymerase Rpb6 H558_RS16595 PF13291 ACT domain H558_RS16595 PF04607 Region found in RelA / SpoT proteins H558_RS16595 PF02824 TGS domain H558_RS16600 PF00005 ABC transporter H558_RS16605 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS16610 PF00497 Bacterial extracellular solute-binding proteins, family 3 H558_RS16620 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB H558_RS16620 PF08479 POTRA domain, ShlB-type H558_RS16620 PF17287 POTRA domain H558_RS16630 PF00577 Outer membrane usher protein H558_RS16630 PF13954 PapC N-terminal domain H558_RS16630 PF13953 PapC C-terminal domain H558_RS16635 PF02753 Pili assembly chaperone PapD, C-terminal domain H558_RS16635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H558_RS16640 PF16970 Type-1 fimbrial protein, A H558_RS16645 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS16645 PF01610 Transposase H558_RS16645 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS16650 PF05594 Haemagluttinin repeat H558_RS16650 PF13332 Hemagglutinin repeat H558_RS16650 PF13018 Extended Signal Peptide of Type V secretion system H558_RS16650 PF13018 Extended Signal Peptide of Type V secretion system H558_RS16650 PF13332 Hemagglutinin repeat H558_RS16650 PF05860 haemagglutination activity domain H558_RS16650 PF05594 Haemagluttinin repeat H558_RS16650 PF05860 haemagglutination activity domain H558_RS16660 PF00005 ABC transporter H558_RS16665 PF13472 GDSL-like Lipase/Acylhydrolase family H558_RS16670 PF13145 PPIC-type PPIASE domain H558_RS16675 PF03009 Glycerophosphoryl diester phosphodiesterase family H558_RS16680 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H558_RS16685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H558_RS16685 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS16690 PF00462 Glutaredoxin H558_RS16690 PF08534 Redoxin H558_RS16700 PF00403 Heavy-metal-associated domain H558_RS16705 PF09278 MerR, DNA binding H558_RS16705 PF00376 MerR family regulatory protein H558_RS16710 PF05958 tRNA (Uracil-5-)-methyltransferase H558_RS16715 PF01527 Transposase H558_RS16720 PF13276 HTH-like domain H558_RS16720 PF13683 Integrase core domain H558_RS16740 PF01551 Peptidase family M23 H558_RS16740 PF01476 LysM domain H558_RS16750 PF01975 Survival protein SurE H558_RS16755 PF02660 Glycerol-3-phosphate acyltransferase H558_RS16770 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS16775 PF04909 Amidohydrolase H558_RS16780 PF03466 LysR substrate binding domain H558_RS16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS16785 PF00814 Glycoprotease family H558_RS16790 PF00860 Permease family H558_RS16795 PF00296 Luciferase-like monooxygenase H558_RS16800 PF00085 Thioredoxin H558_RS16805 PF01205 Uncharacterized protein family UPF0029 H558_RS16830 PF00005 ABC transporter H558_RS16835 PF12848 ABC transporter H558_RS16835 PF00005 ABC transporter H558_RS16840 PF17676 LD-carboxypeptidase C-terminal domain H558_RS16840 PF02016 LD-carboxypeptidase N-terminal domain H558_RS16845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H558_RS16860 PF03334 Na+/H+ antiporter subunit H558_RS16865 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) H558_RS16870 PF01899 Na+/H+ ion antiporter subunit H558_RS16875 PF00361 Proton-conducting membrane transporter H558_RS16880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H558_RS16885 PF13244 Domain of unknown function (DUF4040) H558_RS16885 PF00361 Proton-conducting membrane transporter H558_RS16885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H558_RS16885 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter H558_RS16890 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS16910 PF00149 Calcineurin-like phosphoesterase H558_RS16910 PF12320 Type 5 capsule protein repressor C-terminal domain H558_RS16920 PF01037 Lrp/AsnC ligand binding domain H558_RS16935 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS16935 PF01610 Transposase H558_RS16935 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS16940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H558_RS16945 PF00455 DeoR C terminal sensor domain H558_RS16945 PF08220 DeoR-like helix-turn-helix domain H558_RS16950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H558_RS16950 PF01266 FAD dependent oxidoreductase H558_RS16960 PF16884 N-terminal domain of oxidoreductase H558_RS16960 PF00107 Zinc-binding dehydrogenase H558_RS16965 PF00440 Bacterial regulatory proteins, tetR family H558_RS16965 PF08361 MAATS-type transcriptional repressor, C-terminal region H558_RS16975 PF00005 ABC transporter H558_RS16990 PF04073 Aminoacyl-tRNA editing domain H558_RS17020 PF00472 RF-1 domain H558_RS17030 PF01242 6-pyruvoyl tetrahydropterin synthase H558_RS17035 PF01070 FMN-dependent dehydrogenase H558_RS17040 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS17040 PF01610 Transposase H558_RS17040 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS17045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H558_RS17045 PF16591 Helical bimodular sensor domain H558_RS17045 PF00672 HAMP domain H558_RS17060 PF02811 PHP domain H558_RS17060 PF14579 Helix-hairpin-helix motif H558_RS17060 PF07733 Bacterial DNA polymerase III alpha NTPase domain H558_RS17060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H558_RS17070 PF03649 Uncharacterised protein family (UPF0014) H558_RS17075 PF00005 ABC transporter H558_RS17080 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain H558_RS17080 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain H558_RS17085 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS17085 PF01610 Transposase H558_RS17085 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS17090 PF01546 Peptidase family M20/M25/M40 H558_RS17090 PF07687 Peptidase dimerisation domain H558_RS17110 PF00155 Aminotransferase class I and II H558_RS17110 PF00392 Bacterial regulatory proteins, gntR family H558_RS17120 PF07992 Pyridine nucleotide-disulphide oxidoreductase H558_RS17120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H558_RS17130 PF00793 DAHP synthetase I family H558_RS17150 PF12833 Helix-turn-helix domain H558_RS17150 PF01965 DJ-1/PfpI family H558_RS17155 PF07237 Protein of unknown function (DUF1428) H558_RS17175 PF02535 ZIP Zinc transporter H558_RS17190 PF07883 Cupin domain H558_RS17190 PF01381 Helix-turn-helix H558_RS17200 PF01527 Transposase H558_RS17205 PF13683 Integrase core domain H558_RS17205 PF13276 HTH-like domain H558_RS17210 PF13276 HTH-like domain H558_RS17210 PF13683 Integrase core domain H558_RS17220 PF03466 LysR substrate binding domain H558_RS17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS17225 PF07690 Major Facilitator Superfamily H558_RS17240 PF07715 TonB-dependent Receptor Plug Domain H558_RS17240 PF00593 TonB dependent receptor H558_RS17245 PF12833 Helix-turn-helix domain H558_RS17250 PF07690 Major Facilitator Superfamily H558_RS17255 PF12833 Helix-turn-helix domain H558_RS17255 PF02311 AraC-like ligand binding domain H558_RS17260 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H558_RS17260 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H558_RS17265 PF07690 Major Facilitator Superfamily H558_RS17275 PF00465 Iron-containing alcohol dehydrogenase H558_RS17280 PF00171 Aldehyde dehydrogenase family H558_RS17285 PF00005 ABC transporter H558_RS17290 PF00005 ABC transporter H558_RS17290 PF12399 Branched-chain amino acid ATP-binding cassette transporter H558_RS17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS17315 PF03466 LysR substrate binding domain H558_RS17320 PF12833 Helix-turn-helix domain H558_RS17320 PF06029 AlkA N-terminal domain H558_RS17320 PF02805 Metal binding domain of Ada H558_RS17320 PF00730 HhH-GPD superfamily base excision DNA repair protein H558_RS17330 PF12833 Helix-turn-helix domain H558_RS17330 PF00730 HhH-GPD superfamily base excision DNA repair protein H558_RS17330 PF06029 AlkA N-terminal domain H558_RS17330 PF02805 Metal binding domain of Ada H558_RS17335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H558_RS17335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H558_RS17350 PF01569 PAP2 superfamily H558_RS17360 PF02567 Phenazine biosynthesis-like protein H558_RS17365 PF01638 HxlR-like helix-turn-helix H558_RS17400 PF13784 Fic/DOC family N-terminal H558_RS17400 PF02661 Fic/DOC family H558_RS17410 PF00117 Glutamine amidotransferase class-I H558_RS17410 PF02540 NAD synthase H558_RS17410 PF00958 GMP synthase C terminal domain H558_RS17415 PF00478 IMP dehydrogenase / GMP reductase domain H558_RS17415 PF00571 CBS domain H558_RS17425 PF03551 Transcriptional regulator PadR-like family H558_RS17430 PF04954 Siderophore-interacting protein H558_RS17430 PF08021 Siderophore-interacting FAD-binding domain H558_RS17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS17435 PF03466 LysR substrate binding domain H558_RS17440 PF13454 FAD-NAD(P)-binding H558_RS17445 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS17455 PF01527 Transposase H558_RS17460 PF13276 HTH-like domain H558_RS17460 PF13683 Integrase core domain H558_RS17465 PF00528 Binding-protein-dependent transport system inner membrane component H558_RS17465 PF12911 N-terminal TM domain of oligopeptide transport permease C H558_RS17470 PF00005 ABC transporter H558_RS17470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS17475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H558_RS17475 PF00005 ABC transporter H558_RS17480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H558_RS17520 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H558_RS17520 PF02769 AIR synthase related protein, C-terminal domain H558_RS17520 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H558_RS17525 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H558_RS17530 PF13276 HTH-like domain H558_RS17530 PF13683 Integrase core domain H558_RS17535 PF01527 Transposase H558_RS17540 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H558_RS17540 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H558_RS17545 PF03480 Bacterial extracellular solute-binding protein, family 7 H558_RS17550 PF03449 Transcription elongation factor, N-terminal H558_RS17550 PF01272 Transcription elongation factor, GreA/GreB, C-term H558_RS17555 PF02811 PHP domain H558_RS17570 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS17570 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS17570 PF01610 Transposase H558_RS17590 PF03466 LysR substrate binding domain H558_RS17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS17595 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS17605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H558_RS17605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H558_RS17615 PF00171 Aldehyde dehydrogenase family H558_RS17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS17625 PF03466 LysR substrate binding domain H558_RS17640 PF02615 Malate/L-lactate dehydrogenase H558_RS17645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H558_RS17645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H558_RS17655 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS17660 PF01527 Transposase H558_RS17665 PF03401 Tripartite tricarboxylate transporter family receptor H558_RS17670 PF04909 Amidohydrolase H558_RS17680 PF11924 Inverse autotransporter, beta-domain H558_RS17680 PF02369 Bacterial Ig-like domain (group 1) H558_RS17680 PF07979 Intimin C-type lectin domain H558_RS17680 PF09134 Invasin, domain 3 H558_RS17695 PF04542 Sigma-70 region 2 H558_RS17695 PF08281 Sigma-70, region 4 H558_RS17700 PF04773 FecR protein H558_RS17700 PF16220 Domain of unknown function (DUF4880) H558_RS17705 PF07715 TonB-dependent Receptor Plug Domain H558_RS17705 PF00593 TonB dependent receptor H558_RS17705 PF07660 Secretin and TonB N terminus short domain H558_RS17710 PF01026 TatD related DNase H558_RS17715 PF00005 ABC transporter H558_RS17720 PF02687 FtsX-like permease family H558_RS17720 PF12704 MacB-like periplasmic core domain H558_RS17730 PF02272 DHHA1 domain H558_RS17730 PF01368 DHH family H558_RS17730 PF17768 RecJ OB domain H558_RS17735 PF00472 RF-1 domain H558_RS17735 PF03462 PCRF domain H558_RS17740 PF00106 short chain dehydrogenase H558_RS17745 PF00152 tRNA synthetases class II (D, K and N) H558_RS17745 PF01336 OB-fold nucleic acid binding domain H558_RS17755 PF02142 MGS-like domain H558_RS17770 PF07660 Secretin and TonB N terminus short domain H558_RS17770 PF00593 TonB dependent receptor H558_RS17770 PF07715 TonB-dependent Receptor Plug Domain H558_RS17775 PF13276 HTH-like domain H558_RS17775 PF13683 Integrase core domain H558_RS17780 PF01695 IstB-like ATP binding protein H558_RS17785 PF02796 Helix-turn-helix domain of resolvase H558_RS17785 PF00665 Integrase core domain H558_RS17790 PF01527 Transposase H558_RS17795 PF07660 Secretin and TonB N terminus short domain H558_RS17795 PF07715 TonB-dependent Receptor Plug Domain H558_RS17795 PF00593 TonB dependent receptor H558_RS17800 PF04384 Iron-sulphur cluster assembly H558_RS17805 PF00111 2Fe-2S iron-sulfur cluster binding domain H558_RS17810 PF00012 Hsp70 protein H558_RS17815 PF07743 HSCB C-terminal oligomerisation domain H558_RS17820 PF01521 Iron-sulphur cluster biosynthesis H558_RS17825 PF01592 NifU-like N terminal domain H558_RS17830 PF00266 Aminotransferase class-V H558_RS17835 PF02082 Transcriptional regulator H558_RS17840 PF01451 Low molecular weight phosphotyrosine protein phosphatase H558_RS17845 PF00271 Helicase conserved C-terminal domain H558_RS17845 PF02151 UvrB/uvrC motif H558_RS17845 PF12344 Ultra-violet resistance protein B H558_RS17845 PF17757 UvrB interaction domain H558_RS17845 PF04851 Type III restriction enzyme, res subunit H558_RS17850 PF00155 Aminotransferase class I and II H558_RS17855 PF00665 Integrase core domain H558_RS17855 PF13333 Integrase core domain H558_RS17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H558_RS17860 PF03466 LysR substrate binding domain H558_RS17880 PF02627 Carboxymuconolactone decarboxylase family H558_RS17895 PF08240 Alcohol dehydrogenase GroES-like domain H558_RS17895 PF00107 Zinc-binding dehydrogenase H558_RS17900 PF13683 Integrase core domain H558_RS17900 PF13276 HTH-like domain H558_RS17905 PF00717 Peptidase S24-like H558_RS17905 PF01726 LexA DNA binding domain H558_RS17910 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS17910 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS17910 PF01610 Transposase H558_RS17915 PF00004 ATPase family associated with various cellular activities (AAA) H558_RS17915 PF02190 ATP-dependent protease La (LON) substrate-binding domain H558_RS17915 PF05362 Lon protease (S16) C-terminal proteolytic domain H558_RS17920 PF06689 ClpX C4-type zinc finger H558_RS17920 PF10431 C-terminal, D2-small domain, of ClpB protein H558_RS17920 PF07724 AAA domain (Cdc48 subfamily) H558_RS17925 PF00574 Clp protease H558_RS17930 PF05697 Bacterial trigger factor protein (TF) H558_RS17930 PF05698 Bacterial trigger factor protein (TF) C-terminus H558_RS17930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H558_RS17935 PF03350 Uncharacterized protein family, UPF0114 H558_RS17940 PF13542 Helix-turn-helix domain of transposase family ISL3 H558_RS17940 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H558_RS17940 PF01610 Transposase H558_RS17945 PF01527 Transposase H558_RS17950 PF00665 Integrase core domain H558_RS17950 PF02796 Helix-turn-helix domain of resolvase H558_RS17955 PF01695 IstB-like ATP binding protein H558_RS17960 PF13276 HTH-like domain H558_RS17960 PF13683 Integrase core domain H558_RS17970 PF00313 'Cold-shock' DNA-binding domain H558_RS18000 PF03050 Transposase IS66 family H558_RS18000 PF13817 IS66 C-terminal element H558_RS18000 PF13007 Transposase C of IS166 homeodomain H558_RS18000 PF13005 zinc-finger binding domain of transposase IS66 H558_RS18015 PF13683 Integrase core domain H558_RS18015 PF13276 HTH-like domain H558_RS18020 PF01527 Transposase H558_RS18055 PF01527 Transposase H558_RS18060 PF13276 HTH-like domain H558_RS18060 PF00665 Integrase core domain H558_RS18060 PF13333 Integrase core domain H558_RS18065 PF00575 S1 RNA binding domain H558_RS18065 PF10150 Ribonuclease E/G family H558_RS18070 PF00990 Diguanylate cyclase, GGDEF domain