H558_RS00025	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS00085	SM01209	H558_RS00085
H558_RS00085	SM01210	H558_RS00085
H558_RS00120	SM00387	Histidine kinase-like ATPases
H558_RS00120	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS00125	SM00382	ATPases associated with a variety of cellular activities
H558_RS00125	SM00448	cheY-homologous receiver domain
H558_RS00170	SM00382	ATPases associated with a variety of cellular activities
H558_RS00195	SM00564	beta-propeller repeat
H558_RS00240	SM00478	endonuclease III
H558_RS00245	SM00840	H558_RS00245
H558_RS00250	SM00028	Tetratricopeptide repeats
H558_RS00270	SM01091	Transporter associated domain
H558_RS00330	SM00382	ATPases associated with a variety of cellular activities
H558_RS00345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS00345	SM00895	H558_RS00345
H558_RS00375	SM00829	Enoylreductase
H558_RS00385	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
H558_RS00385	SM00534	ATPase domain of DNA mismatch repair MUTS family
H558_RS00390	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
H558_RS00405	SM01130	H558_RS00405
H558_RS00450	SM00155	Phospholipase D. Active site motifs.
H558_RS00530	SM00052	Putative diguanylate phosphodiesterase
H558_RS00530	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
H558_RS00530	SM00091	PAS domain
H558_RS00530	SM00267	diguanylate cyclase
H558_RS00535	SM00450	Rhodanese Homology Domain
H558_RS00565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS00565	SM00866	H558_RS00565
H558_RS00575	SM00869	Autotransporter beta-domain
H558_RS00645	SM00346	helix_turn_helix isocitrate lyase regulation
H558_RS00655	SM00382	ATPases associated with a variety of cellular activities
H558_RS00690	SM00829	Enoylreductase
H558_RS00710	SM00938	Nitrogen regulatory protein P-II
H558_RS00735	SM00422	helix_turn_helix, mercury resistance
H558_RS00760	SM00382	ATPases associated with a variety of cellular activities
H558_RS00790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS00790	SM00895	H558_RS00790
H558_RS00800	SM00869	Autotransporter beta-domain
H558_RS00845	SM00382	ATPases associated with a variety of cellular activities
H558_RS00855	SM00843	H558_RS00855
H558_RS00865	SM00463	Small MutS-related domain
H558_RS00905	SM00387	Histidine kinase-like ATPases
H558_RS00905	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS00910	SM00448	cheY-homologous receiver domain
H558_RS00910	SM00862	Transcriptional regulatory protein, C terminal
H558_RS00925	SM01329	H558_RS00925
H558_RS00945	SM00382	ATPases associated with a variety of cellular activities
H558_RS00970	SM00271	DnaJ molecular chaperone homology domain
H558_RS01080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS01080	SM00895	H558_RS01080
H558_RS01125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS01125	SM00895	H558_RS01125
H558_RS01145	SM00833	Cobalamin synthesis protein cobW C-terminal domain
H558_RS01235	SM00346	helix_turn_helix isocitrate lyase regulation
H558_RS01240	SM00852	Probable molybdopterin binding domain
H558_RS01255	SM00487	DEAD-like helicases superfamily
H558_RS01255	SM00490	helicase superfamily c-terminal domain
H558_RS01325	SM01011	Aminopeptidase P, N-terminal domain
H558_RS01360	SM00798	AICARFT/IMPCHase bienzyme
H558_RS01360	SM00851	MGS-like domain
H558_RS01370	SM00278	Helix-hairpin-helix DNA-binding motif class 1
H558_RS01385	SM00382	ATPases associated with a variety of cellular activities
H558_RS01390	SM00341	Helicase and RNase D C-terminal
H558_RS01390	SM00487	DEAD-like helicases superfamily
H558_RS01390	SM00490	helicase superfamily c-terminal domain
H558_RS01390	SM00956	H558_RS01390
H558_RS01400	SM00448	cheY-homologous receiver domain
H558_RS01400	SM00862	Transcriptional regulatory protein, C terminal
H558_RS01405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
H558_RS01405	SM00387	Histidine kinase-like ATPases
H558_RS01455	SM00382	ATPases associated with a variety of cellular activities
H558_RS01470	SM00382	ATPases associated with a variety of cellular activities
H558_RS01475	SM00382	ATPases associated with a variety of cellular activities
H558_RS01510	SM00936	Penicillin-binding protein 5, C-terminal domain 
H558_RS01530	SM00829	Enoylreductase
H558_RS01535	SM00387	Histidine kinase-like ATPases
H558_RS01535	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS01540	SM00421	helix_turn_helix, Lux Regulon
H558_RS01540	SM00448	cheY-homologous receiver domain
H558_RS01550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS01550	SM00895	H558_RS01550
H558_RS01580	SM00487	DEAD-like helicases superfamily
H558_RS01580	SM00490	helicase superfamily c-terminal domain
H558_RS01595	SM00831	Cation transporter/ATPase, N-terminus
H558_RS01610	SM00965	Secretin and TonB N terminus short domain
H558_RS01675	SM00883	Chaperonin 10 Kd subunit
H558_RS01700	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
H558_RS01740	SM00346	helix_turn_helix isocitrate lyase regulation
H558_RS01745	SM00965	Secretin and TonB N terminus short domain
H558_RS01765	SM00382	ATPases associated with a variety of cellular activities
H558_RS01780	SM00880	H558_RS01780
H558_RS01780	SM01118	H558_RS01780
H558_RS01785	SM00382	ATPases associated with a variety of cellular activities
H558_RS01785	SM00962	SRP54-type protein, GTPase domain
H558_RS01785	SM00963	SRP54-type protein, helical bundle domain
H558_RS01930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS01930	SM00895	H558_RS01930
H558_RS01945	SM01007	Class II Aldolase and Adducin N-terminal domain
H558_RS01960	SM00965	Secretin and TonB N terminus short domain
H558_RS02000	SM01400	H558_RS02000
H558_RS02020	SM00028	Tetratricopeptide repeats
H558_RS02025	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
H558_RS02025	SM01232	H558_RS02025
H558_RS02030	SM00849	Metallo-beta-lactamase superfamily
H558_RS02070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS02070	SM00895	H558_RS02070
H558_RS02085	SM00387	Histidine kinase-like ATPases
H558_RS02085	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS02090	SM00448	cheY-homologous receiver domain
H558_RS02090	SM00862	Transcriptional regulatory protein, C terminal
H558_RS02150	SM00984	UDP binding domain
H558_RS02185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS02220	SM00382	ATPases associated with a variety of cellular activities
H558_RS02320	SM00862	Transcriptional regulatory protein, C terminal
H558_RS02335	SM00387	Histidine kinase-like ATPases
H558_RS02335	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS02340	SM00448	cheY-homologous receiver domain
H558_RS02340	SM00862	Transcriptional regulatory protein, C terminal
H558_RS02370	SM00382	ATPases associated with a variety of cellular activities
H558_RS02390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS02390	SM00895	H558_RS02390
H558_RS02410	SM00382	ATPases associated with a variety of cellular activities
H558_RS02455	SM00450	Rhodanese Homology Domain
H558_RS02485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS02505	SM00903	Flavin reductase like domain
H558_RS02530	SM00881	CoA binding domain
H558_RS02545	SM00822	H558_RS02545
H558_RS02680	SM00382	ATPases associated with a variety of cellular activities
H558_RS02695	SM00382	ATPases associated with a variety of cellular activities
H558_RS02695	SM00962	SRP54-type protein, GTPase domain
H558_RS02695	SM00963	SRP54-type protein, helical bundle domain
H558_RS02710	SM00644	H558_RS02710
H558_RS02720	SM00382	ATPases associated with a variety of cellular activities
H558_RS02725	SM00382	ATPases associated with a variety of cellular activities
H558_RS02770	SM00387	Histidine kinase-like ATPases
H558_RS02835	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS02900	SM00822	H558_RS02900
H558_RS02925	SM00382	ATPases associated with a variety of cellular activities
H558_RS02925	SM00930	H558_RS02925
H558_RS02970	SM00116	Domain in cystathionine beta-synthase and other proteins.
H558_RS02970	SM00924	MgtE intracellular N domain
H558_RS02985	SM00344	helix_turn_helix ASNC type
H558_RS03025	SM00244	prohibitin homologues
H558_RS03030	SM00244	prohibitin homologues
H558_RS03050	SM00382	ATPases associated with a variety of cellular activities
H558_RS03055	SM00564	beta-propeller repeat
H558_RS03085	SM00562	H558_RS03085
H558_RS03120	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
H558_RS03230	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS03255	SM00434	DNA Topoisomerase IV
H558_RS03265	SM00387	Histidine kinase-like ATPases
H558_RS03265	SM00433	TopoisomeraseII
H558_RS03275	SM00357	Cold shock protein domain
H558_RS03275	SM00382	ATPases associated with a variety of cellular activities
H558_RS03275	SM00959	Rho termination factor, N-terminal domain
H558_RS03350	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
H558_RS03350	SM00474	3'-5' exonuclease
H558_RS03350	SM00475	5'-3' exonuclease
H558_RS03350	SM00482	DNA polymerase A domain
H558_RS03380	SM00382	ATPases associated with a variety of cellular activities
H558_RS03435	SM00411	bacterial (prokaryotic) histone like domain
H558_RS03440	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS03490	SM00382	ATPases associated with a variety of cellular activities
H558_RS03565	SM00479	H558_RS03565
H558_RS03605	SM00841	Elongation factor P, C-terminal
H558_RS03605	SM01185	H558_RS03605
H558_RS03620	SM00382	ATPases associated with a variety of cellular activities
H558_RS03650	SM00028	Tetratricopeptide repeats
H558_RS03715	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS03800	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
H558_RS03800	SM00267	diguanylate cyclase
H558_RS03805	SM00859	Semialdehyde dehydrogenase, NAD binding domain
H558_RS03820	SM00248	ankyrin repeats
H558_RS03870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS03870	SM00895	H558_RS03870
H558_RS03915	SM00267	diguanylate cyclase
H558_RS03930	SM00382	ATPases associated with a variety of cellular activities
H558_RS03940	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS03975	SM00903	Flavin reductase like domain
H558_RS03980	SM00116	Domain in cystathionine beta-synthase and other proteins.
H558_RS03995	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS04015	SM00382	ATPases associated with a variety of cellular activities
H558_RS04020	SM00382	ATPases associated with a variety of cellular activities
H558_RS04110	SM00965	Secretin and TonB N terminus short domain
H558_RS04140	SM00382	ATPases associated with a variety of cellular activities
H558_RS04180	SM00965	Secretin and TonB N terminus short domain
H558_RS04220	SM00382	ATPases associated with a variety of cellular activities
H558_RS04240	SM00382	ATPases associated with a variety of cellular activities
H558_RS04245	SM00382	ATPases associated with a variety of cellular activities
H558_RS04295	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
H558_RS04310	SM00530	Helix-turn-helix XRE-family like proteins 
H558_RS04320	SM00822	H558_RS04320
H558_RS04370	SM00382	ATPases associated with a variety of cellular activities
H558_RS04375	SM00382	ATPases associated with a variety of cellular activities
H558_RS04380	SM00028	Tetratricopeptide repeats
H558_RS04390	SM00382	ATPases associated with a variety of cellular activities
H558_RS04415	SM00382	ATPases associated with a variety of cellular activities
H558_RS04440	SM00903	Flavin reductase like domain
H558_RS04485	SM00646	H558_RS04485
H558_RS04495	SM00853	MutL C terminal dimerisation domain
H558_RS04495	SM01340	H558_RS04495
H558_RS04510	SM00382	ATPases associated with a variety of cellular activities
H558_RS04580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS04580	SM00866	H558_RS04580
H558_RS04615	SM00563	Phosphate acyltransferases
H558_RS04675	SM00650	Ribosomal RNA adenine dimethylases
H558_RS04750	SM00155	Phospholipase D. Active site motifs.
H558_RS04755	SM00947	Carbonic anhydrase
H558_RS04790	SM00882	Coenzyme A transferase
H558_RS04800	SM00346	helix_turn_helix isocitrate lyase regulation
H558_RS04820	SM00869	Autotransporter beta-domain
H558_RS04855	SM01130	H558_RS04855
H558_RS04910	SM00869	Autotransporter beta-domain
H558_RS04945	SM00937	H558_RS04945
H558_RS04970	SM00965	Secretin and TonB N terminus short domain
H558_RS05005	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
H558_RS05030	SM00965	Secretin and TonB N terminus short domain
H558_RS05075	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
H558_RS05120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS05120	SM00895	H558_RS05120
H558_RS05130	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
H558_RS05130	SM00245	tail specific protease
H558_RS05140	SM00855	Phosphoglycerate mutase family
H558_RS05145	SM00450	Rhodanese Homology Domain
H558_RS05200	SM00448	cheY-homologous receiver domain
H558_RS05205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
H558_RS05205	SM00387	Histidine kinase-like ATPases
H558_RS05205	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS05250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS05250	SM00866	H558_RS05250
H558_RS05255	SM00530	Helix-turn-helix XRE-family like proteins 
H558_RS05320	SM00344	helix_turn_helix ASNC type
H558_RS05335	SM00387	Histidine kinase-like ATPases
H558_RS05335	SM01049	H558_RS05335
H558_RS05340	SM00421	helix_turn_helix, Lux Regulon
H558_RS05340	SM00448	cheY-homologous receiver domain
H558_RS05360	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS05415	SM00382	ATPases associated with a variety of cellular activities
H558_RS05420	SM00382	ATPases associated with a variety of cellular activities
H558_RS05425	SM00100	Cyclic nucleotide-monophosphate binding domain
H558_RS05435	SM00382	ATPases associated with a variety of cellular activities
H558_RS05455	SM00382	ATPases associated with a variety of cellular activities
H558_RS05475	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
H558_RS05480	SM00849	Metallo-beta-lactamase superfamily
H558_RS05520	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS05530	SM00986	Uracil DNA glycosylase superfamily
H558_RS05530	SM00987	UreE urease accessory protein, C-terminal domain 
H558_RS05535	SM00487	DEAD-like helicases superfamily
H558_RS05535	SM00490	helicase superfamily c-terminal domain
H558_RS05575	SM00460	Transglutaminase/protease-like homologues
H558_RS05625	SM00996	S-adenosyl-L-homocysteine hydrolase
H558_RS05625	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
H558_RS05705	SM00382	ATPases associated with a variety of cellular activities
H558_RS05715	SM00833	Cobalamin synthesis protein cobW C-terminal domain
H558_RS05730	SM00382	ATPases associated with a variety of cellular activities
H558_RS05730	SM01086	C-terminal, D2-small domain, of ClpB protein
H558_RS05745	SM00729	Elongator protein 3, MiaB family, Radical SAM
H558_RS05765	SM00936	Penicillin-binding protein 5, C-terminal domain 
H558_RS05785	SM00382	ATPases associated with a variety of cellular activities
H558_RS05855	SM00155	Phospholipase D. Active site motifs.
H558_RS05875	SM00834	Putative regulatory protein
H558_RS05895	SM01130	H558_RS05895
H558_RS05900	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
H558_RS05920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS05920	SM00895	H558_RS05920
H558_RS05930	SM00382	ATPases associated with a variety of cellular activities
H558_RS05945	SM00387	Histidine kinase-like ATPases
H558_RS05945	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS05950	SM00448	cheY-homologous receiver domain
H558_RS05950	SM00862	Transcriptional regulatory protein, C terminal
H558_RS06010	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
H558_RS06010	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
H558_RS06010	SM00493	H558_RS06010
H558_RS06025	SM00382	ATPases associated with a variety of cellular activities
H558_RS06065	SM00344	helix_turn_helix ASNC type
H558_RS06075	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
H558_RS06110	SM01034	Sensors of blue-light using FAD
H558_RS06115	SM00387	Histidine kinase-like ATPases
H558_RS06115	SM00433	TopoisomeraseII
H558_RS06120	SM00480	DNA polymerase III beta subunit
H558_RS06125	SM00382	ATPases associated with a variety of cellular activities
H558_RS06125	SM00760	Bacterial dnaA protein helix-turn-helix domain
H558_RS06140	SM01234	H558_RS06140
H558_RS06160	SM00382	ATPases associated with a variety of cellular activities
H558_RS06165	SM00382	ATPases associated with a variety of cellular activities
H558_RS06200	SM00919	Malic enzyme, NAD binding domain
H558_RS06200	SM01274	H558_RS06200
H558_RS06205	SM00448	cheY-homologous receiver domain
H558_RS06205	SM00862	Transcriptional regulatory protein, C terminal
H558_RS06210	SM00387	Histidine kinase-like ATPases
H558_RS06210	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS06235	SM00357	Cold shock protein domain
H558_RS06240	SM01228	H558_RS06240
H558_RS06255	SM00470	ParB-like nuclease domain
H558_RS06295	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
H558_RS06295	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
H558_RS06300	SM00649	Ribosomal protein L11/L12
H558_RS06325	SM00663	RNA polymerase I subunit A N-terminus
H558_RS06375	SM00838	Elongation factor G C-terminus
H558_RS06375	SM00889	Elongation factor G, domain IV
H558_RS06385	SM01403	H558_RS06385
H558_RS06405	SM01382	H558_RS06405
H558_RS06405	SM01383	H558_RS06405
H558_RS06420	SM00322	K homology RNA-binding domain
H558_RS06460	SM00382	ATPases associated with a variety of cellular activities
H558_RS06475	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS06490	SM01374	H558_RS06490
H558_RS06565	SM00363	S4 RNA-binding domain
H558_RS06565	SM01390	H558_RS06565
H558_RS06570	SM00662	RNA polymerases D
H558_RS06600	SM01004	Delta-aminolevulinic acid dehydratase
H558_RS06630	SM01219	H558_RS06630
H558_RS06650	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
H558_RS06655	SM00421	helix_turn_helix, Lux Regulon
H558_RS06755	SM01119	H558_RS06755
H558_RS06790	SM00422	helix_turn_helix, mercury resistance
H558_RS06795	SM00849	Metallo-beta-lactamase superfamily
H558_RS06810	SM00052	Putative diguanylate phosphodiesterase
H558_RS06825	SM00836	DALR anticodon binding domain
H558_RS06825	SM01016	Arginyl tRNA synthetase N terminal dom
H558_RS06845	SM00917	LeuA allosteric (dimerisation) domain
H558_RS06970	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS07000	SM00487	DEAD-like helicases superfamily
H558_RS07000	SM00490	helicase superfamily c-terminal domain
H558_RS07080	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
H558_RS07165	SM00382	ATPases associated with a variety of cellular activities
H558_RS07190	SM00382	ATPases associated with a variety of cellular activities
H558_RS07225	SM00829	Enoylreductase
H558_RS07365	SM00984	UDP binding domain
H558_RS07375	SM00344	helix_turn_helix ASNC type
H558_RS07425	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
H558_RS07430	SM01130	H558_RS07430
H558_RS07445	SM00665	Cytochrome b-561 / ferric reductase transmembrane domain.
H558_RS07510	SM00346	helix_turn_helix isocitrate lyase regulation
H558_RS07595	SM00822	H558_RS07595
H558_RS07645	SM00267	diguanylate cyclase
H558_RS07660	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS07690	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS07695	SM00382	ATPases associated with a variety of cellular activities
H558_RS07755	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
H558_RS07855	SM00925	MltA specific insert domain
H558_RS07880	SM00905	Dihydroneopterin aldolase
H558_RS07890	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
H558_RS07940	SM00382	ATPases associated with a variety of cellular activities
H558_RS07965	SM00487	DEAD-like helicases superfamily
H558_RS07965	SM00490	helicase superfamily c-terminal domain
H558_RS07985	SM00382	ATPases associated with a variety of cellular activities
H558_RS07990	SM00382	ATPases associated with a variety of cellular activities
H558_RS08130	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
H558_RS08145	SM00845	GatB domain
H558_RS08220	SM00749	bacterial OsmY and nodulation domain
H558_RS08295	SM00382	ATPases associated with a variety of cellular activities
H558_RS08315	SM00116	Domain in cystathionine beta-synthase and other proteins.
H558_RS08350	SM00382	ATPases associated with a variety of cellular activities
H558_RS08355	SM00382	ATPases associated with a variety of cellular activities
H558_RS08390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS08390	SM00895	H558_RS08390
H558_RS08400	SM00797	Allophanate hydrolase subunit 2
H558_RS08405	SM00796	Allophanate hydrolase subunit 1
H558_RS08425	SM00387	Histidine kinase-like ATPases
H558_RS08425	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS08430	SM00448	cheY-homologous receiver domain
H558_RS08430	SM00862	Transcriptional regulatory protein, C terminal
H558_RS08445	SM00978	H558_RS08445
H558_RS08460	SM00382	ATPases associated with a variety of cellular activities
H558_RS08575	SM01018	B12 binding domain
H558_RS08585	SM00530	Helix-turn-helix XRE-family like proteins 
H558_RS08590	SM00478	endonuclease III
H558_RS08610	SM00382	ATPases associated with a variety of cellular activities
H558_RS08615	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS08630	SM00382	ATPases associated with a variety of cellular activities
H558_RS08755	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS08780	SM00382	ATPases associated with a variety of cellular activities
H558_RS08785	SM00382	ATPases associated with a variety of cellular activities
H558_RS08795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
H558_RS08795	SM00331	Sigma factor PP2C-like phosphatases
H558_RS08810	SM00267	diguanylate cyclase
H558_RS08820	SM00822	H558_RS08820
H558_RS08880	SM00732	Likely ribonuclease with RNase H fold.
H558_RS08900	SM00563	Phosphate acyltransferases
H558_RS08930	SM00955	H558_RS08930
H558_RS08960	SM00878	Biotin carboxylase C-terminal domain
H558_RS09045	SM00344	helix_turn_helix ASNC type
H558_RS09070	SM00382	ATPases associated with a variety of cellular activities
H558_RS09075	SM00382	ATPases associated with a variety of cellular activities
H558_RS09120	SM00530	Helix-turn-helix XRE-family like proteins 
H558_RS09165	SM00859	Semialdehyde dehydrogenase, NAD binding domain
H558_RS09195	SM00363	S4 RNA-binding domain
H558_RS09215	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS09250	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS09325	SM00564	beta-propeller repeat
H558_RS09330	SM00862	Transcriptional regulatory protein, C terminal
H558_RS09375	SM00257	Lysin motif
H558_RS09380	SM00849	Metallo-beta-lactamase superfamily
H558_RS09415	SM00479	H558_RS09415
H558_RS09435	SM00382	ATPases associated with a variety of cellular activities
H558_RS09485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS09510	SM00838	Elongation factor G C-terminus
H558_RS09510	SM00889	Elongation factor G, domain IV
H558_RS09575	SM00448	cheY-homologous receiver domain
H558_RS09575	SM00862	Transcriptional regulatory protein, C terminal
H558_RS09580	SM00387	Histidine kinase-like ATPases
H558_RS09580	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS09665	SM00344	helix_turn_helix ASNC type
H558_RS09715	SM00151	SWI complex, BAF60b domains
H558_RS09730	SM00382	ATPases associated with a variety of cellular activities
H558_RS09800	SM00842	Cell division protein FtsA
H558_RS09805	SM00864	Tubulin/FtsZ family, GTPase domain
H558_RS09805	SM00865	Tubulin/FtsZ family, C-terminal domain
H558_RS09830	SM00957	SecA DEAD-like domain
H558_RS09830	SM00958	SecA preprotein cross-linking domain
H558_RS09850	SM00788	Adenylosuccinate synthetase
H558_RS09865	SM00400	zinc finger
H558_RS09865	SM00493	H558_RS09865
H558_RS09865	SM00766	DNA primase DnaG DnaB-binding
H558_RS09895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
H558_RS09915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS09965	SM00014	Acid phosphatase homologues
H558_RS10015	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
H558_RS10020	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
H558_RS10070	SM00487	DEAD-like helicases superfamily
H558_RS10070	SM00490	helicase superfamily c-terminal domain
H558_RS10070	SM00982	H558_RS10070
H558_RS10070	SM01058	CarD-like/TRCF domain
H558_RS10110	SM00448	cheY-homologous receiver domain
H558_RS10110	SM00862	Transcriptional regulatory protein, C terminal
H558_RS10125	SM00986	Uracil DNA glycosylase superfamily
H558_RS10125	SM00987	UreE urease accessory protein, C-terminal domain 
H558_RS10135	SM00968	SMC proteins Flexible Hinge Domain
H558_RS10140	SM00771	ZipA, C-terminal domain (FtsZ-binding)
H558_RS10145	SM00278	Helix-hairpin-helix DNA-binding motif class 1
H558_RS10145	SM00292	breast cancer carboxy-terminal domain
H558_RS10145	SM00532	Ligase N family
H558_RS10150	SM00382	ATPases associated with a variety of cellular activities
H558_RS10160	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS10180	SM00382	ATPases associated with a variety of cellular activities
H558_RS10205	SM00382	ATPases associated with a variety of cellular activities
H558_RS10210	SM00382	ATPases associated with a variety of cellular activities
H558_RS10255	SM00478	endonuclease III
H558_RS10255	SM00525	H558_RS10255
H558_RS10300	SM00954	Region found in RelA / SpoT proteins
H558_RS10350	SM00316	Ribosomal protein S1-like RNA-binding domain
H558_RS10355	SM00363	S4 RNA-binding domain
H558_RS10375	SM00644	H558_RS10375
H558_RS10410	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
H558_RS10415	SM00822	H558_RS10415
H558_RS10425	SM00825	Beta-ketoacyl synthase
H558_RS10480	SM00838	Elongation factor G C-terminus
H558_RS10490	SM00358	Double-stranded RNA binding motif
H558_RS10490	SM00535	Ribonuclease III family
H558_RS10505	SM00267	diguanylate cyclase
H558_RS10625	SM00882	Coenzyme A transferase
H558_RS10630	SM00882	Coenzyme A transferase
H558_RS10645	SM00382	ATPases associated with a variety of cellular activities
H558_RS10690	SM01192	H558_RS10690
H558_RS10690	SM01193	H558_RS10690
H558_RS10755	SM00981	H558_RS10755
H558_RS10785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS10785	SM00866	H558_RS10785
H558_RS10830	SM00382	ATPases associated with a variety of cellular activities
H558_RS10865	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
H558_RS10880	SM00919	Malic enzyme, NAD binding domain
H558_RS10880	SM01274	H558_RS10880
H558_RS10895	SM00861	Transketolase, pyrimidine binding domain
H558_RS10925	SM00965	Secretin and TonB N terminus short domain
H558_RS10945	SM00316	Ribosomal protein S1-like RNA-binding domain
H558_RS10945	SM00732	Likely ribonuclease with RNase H fold.
H558_RS10950	SM00487	DEAD-like helicases superfamily
H558_RS10950	SM00491	H558_RS10950
H558_RS10960	SM00363	S4 RNA-binding domain
H558_RS10975	SM00822	H558_RS10975
H558_RS11010	SM00749	bacterial OsmY and nodulation domain
H558_RS11040	SM00382	ATPases associated with a variety of cellular activities
H558_RS11070	SM00267	diguanylate cyclase
H558_RS11080	SM00822	H558_RS11080
H558_RS11170	SM00434	DNA Topoisomerase IV
H558_RS11180	SM00830	Chorismate mutase type II
H558_RS11205	SM00316	Ribosomal protein S1-like RNA-binding domain
H558_RS11210	SM00411	bacterial (prokaryotic) histone like domain
H558_RS11255	SM00893	Electron transfer flavoprotein domain
H558_RS11260	SM00893	Electron transfer flavoprotein domain
H558_RS11295	SM00382	ATPases associated with a variety of cellular activities
H558_RS11315	SM00729	Elongator protein 3, MiaB family, Radical SAM
H558_RS11355	SM00479	H558_RS11355
H558_RS11430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS11430	SM00895	H558_RS11430
H558_RS11470	SM00382	ATPases associated with a variety of cellular activities
H558_RS11530	SM00382	ATPases associated with a variety of cellular activities
H558_RS11530	SM00487	DEAD-like helicases superfamily
H558_RS11530	SM00490	helicase superfamily c-terminal domain
H558_RS11530	SM00847	Helicase associated domain (HA2)  Add an annotation
H558_RS11540	SM00481	DNA polymerase alpha chain like domain
H558_RS11585	SM00382	ATPases associated with a variety of cellular activities
H558_RS11605	SM00829	Enoylreductase
H558_RS11620	SM00450	Rhodanese Homology Domain
H558_RS11650	SM00346	helix_turn_helix isocitrate lyase regulation
H558_RS11665	SM00861	Transketolase, pyrimidine binding domain
H558_RS11700	SM00382	ATPases associated with a variety of cellular activities
H558_RS11715	SM00670	Large family of predicted nucleotide-binding domains
H558_RS11770	SM00528	Domain in histone-like proteins of HNS family
H558_RS11830	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
H558_RS11830	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
H558_RS11915	SM00267	diguanylate cyclase
H558_RS12005	SM01144	H558_RS12005
H558_RS12015	SM00316	Ribosomal protein S1-like RNA-binding domain
H558_RS12015	SM00357	Cold shock protein domain
H558_RS12015	SM00955	H558_RS12015
H558_RS12020	SM00967	RNA 2'-O ribose methyltransferase substrate binding
H558_RS12030	SM00411	bacterial (prokaryotic) histone like domain
H558_RS12055	SM00448	cheY-homologous receiver domain
H558_RS12055	SM00862	Transcriptional regulatory protein, C terminal
H558_RS12060	SM00387	Histidine kinase-like ATPases
H558_RS12060	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS12120	SM01130	H558_RS12120
H558_RS12125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS12125	SM00895	H558_RS12125
H558_RS12295	SM00357	Cold shock protein domain
H558_RS12310	SM01359	H558_RS12310
H558_RS12310	SM01360	H558_RS12310
H558_RS12320	SM00382	ATPases associated with a variety of cellular activities
H558_RS12320	SM01086	C-terminal, D2-small domain, of ClpB protein
H558_RS12360	SM00382	ATPases associated with a variety of cellular activities
H558_RS12365	SM00382	ATPases associated with a variety of cellular activities
H558_RS12380	SM00938	Nitrogen regulatory protein P-II
H558_RS12405	SM00382	ATPases associated with a variety of cellular activities
H558_RS12425	SM00873	B3/4 domain
H558_RS12425	SM00874	tRNA synthetase B5 domain
H558_RS12425	SM00896	Ferredoxin-fold anticodon binding domain
H558_RS12430	SM00411	bacterial (prokaryotic) histone like domain
H558_RS12435	SM00422	helix_turn_helix, mercury resistance
H558_RS12460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS12460	SM00895	H558_RS12460
H558_RS12490	SM00357	Cold shock protein domain
H558_RS12495	SM00477	DNA/RNA non-specific endonuclease
H558_RS12495	SM00892	DNA/RNA non-specific endonuclease
H558_RS12520	SM00344	helix_turn_helix ASNC type
H558_RS12570	SM00382	ATPases associated with a variety of cellular activities
H558_RS12780	SM00318	Staphylococcal nuclease homologues
H558_RS12800	SM00382	ATPases associated with a variety of cellular activities
H558_RS12850	SM00387	Histidine kinase-like ATPases
H558_RS12855	SM00448	cheY-homologous receiver domain
H558_RS12910	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
H558_RS12910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
H558_RS12915	SM00257	Lysin motif
H558_RS13000	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
H558_RS13015	SM00729	Elongator protein 3, MiaB family, Radical SAM
H558_RS13025	SM00852	Probable molybdopterin binding domain
H558_RS13030	SM00852	Probable molybdopterin binding domain
H558_RS13075	SM00100	Cyclic nucleotide-monophosphate binding domain
H558_RS13075	SM00419	helix_turn_helix, cAMP Regulatory protein
H558_RS13080	SM01119	H558_RS13080
H558_RS13085	SM00382	ATPases associated with a variety of cellular activities
H558_RS13085	SM01086	C-terminal, D2-small domain, of ClpB protein
H558_RS13140	SM01005	Alanine racemase, C-terminal domain
H558_RS13145	SM00822	H558_RS13145
H558_RS13155	SM00382	ATPases associated with a variety of cellular activities
H558_RS13235	SM00833	Cobalamin synthesis protein cobW C-terminal domain
H558_RS13255	SM00363	S4 RNA-binding domain
H558_RS13265	SM00316	Ribosomal protein S1-like RNA-binding domain
H558_RS13285	SM00838	Elongation factor G C-terminus
H558_RS13300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS13300	SM00895	H558_RS13300
H558_RS13345	SM00382	ATPases associated with a variety of cellular activities
H558_RS13360	SM00382	ATPases associated with a variety of cellular activities
H558_RS13380	SM00862	Transcriptional regulatory protein, C terminal
H558_RS13420	SM00278	Helix-hairpin-helix DNA-binding motif class 1
H558_RS13420	SM00465	GIY-YIG type nucleases (URI domain)
H558_RS13445	SM00347	helix_turn_helix multiple antibiotic resistance protein
H558_RS13455	SM00382	ATPases associated with a variety of cellular activities
H558_RS13470	SM00052	Putative diguanylate phosphodiesterase
H558_RS13470	SM00267	diguanylate cyclase
H558_RS13550	SM00729	Elongator protein 3, MiaB family, Radical SAM
H558_RS13550	SM00876	Biotin and Thiamin Synthesis associated domain
H558_RS13570	SM00014	Acid phosphatase homologues
H558_RS13575	SM00729	Elongator protein 3, MiaB family, Radical SAM
H558_RS13590	SM01091	Transporter associated domain
H558_RS13630	SM01323	H558_RS13630
H558_RS13705	SM00919	Malic enzyme, NAD binding domain
H558_RS13705	SM01274	H558_RS13705
H558_RS13725	SM00861	Transketolase, pyrimidine binding domain
H558_RS13730	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
H558_RS13785	SM00271	DnaJ molecular chaperone homology domain
H558_RS13810	SM00852	Probable molybdopterin binding domain
H558_RS13830	SM00316	Ribosomal protein S1-like RNA-binding domain
H558_RS13895	SM01001	AIR carboxylase
H558_RS13920	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS13935	SM01007	Class II Aldolase and Adducin N-terminal domain
H558_RS14000	SM00382	ATPases associated with a variety of cellular activities
H558_RS14010	SM00493	H558_RS14010
H558_RS14025	SM00382	ATPases associated with a variety of cellular activities
H558_RS14040	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
H558_RS14045	SM00851	MGS-like domain
H558_RS14045	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
H558_RS14055	SM00822	H558_RS14055
H558_RS14060	SM00855	Phosphoglycerate mutase family
H558_RS14095	SM00530	Helix-turn-helix XRE-family like proteins 
H558_RS14110	SM01103	H558_RS14110
H558_RS14120	SM00382	ATPases associated with a variety of cellular activities
H558_RS14160	SM00382	ATPases associated with a variety of cellular activities
H558_RS14185	SM00382	ATPases associated with a variety of cellular activities
H558_RS14230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS14285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
H558_RS14285	SM00387	Histidine kinase-like ATPases
H558_RS14285	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS14290	SM00448	cheY-homologous receiver domain
H558_RS14290	SM00862	Transcriptional regulatory protein, C terminal
H558_RS14295	SM00382	ATPases associated with a variety of cellular activities
H558_RS14330	SM00881	CoA binding domain
H558_RS14385	SM00382	ATPases associated with a variety of cellular activities
H558_RS14385	SM00464	Found in ATP-dependent protease La (LON)
H558_RS14425	SM00858	H558_RS14425
H558_RS14435	SM00240	Forkhead associated domain
H558_RS14480	SM00116	Domain in cystathionine beta-synthase and other proteins.
H558_RS14500	SM00448	cheY-homologous receiver domain
H558_RS14500	SM00862	Transcriptional regulatory protein, C terminal
H558_RS14505	SM00052	Putative diguanylate phosphodiesterase
H558_RS14505	SM00267	diguanylate cyclase
H558_RS14505	SM00387	Histidine kinase-like ATPases
H558_RS14505	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS14510	SM00052	Putative diguanylate phosphodiesterase
H558_RS14525	SM00421	helix_turn_helix, Lux Regulon
H558_RS14565	SM01329	H558_RS14565
H558_RS14570	SM00859	Semialdehyde dehydrogenase, NAD binding domain
H558_RS14575	SM00257	Lysin motif
H558_RS14630	SM00729	Elongator protein 3, MiaB family, Radical SAM
H558_RS14635	SM00421	helix_turn_helix, Lux Regulon
H558_RS14635	SM00448	cheY-homologous receiver domain
H558_RS14640	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
H558_RS14690	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS14740	SM00344	helix_turn_helix ASNC type
H558_RS14780	SM00904	Riboflavin kinase
H558_RS14820	SM00382	ATPases associated with a variety of cellular activities
H558_RS14875	SM00382	ATPases associated with a variety of cellular activities
H558_RS15000	SM00052	Putative diguanylate phosphodiesterase
H558_RS15000	SM00267	diguanylate cyclase
H558_RS15010	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS15070	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
H558_RS15070	SM00091	PAS domain
H558_RS15070	SM00387	Histidine kinase-like ATPases
H558_RS15070	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS15075	SM00421	helix_turn_helix, Lux Regulon
H558_RS15075	SM00448	cheY-homologous receiver domain
H558_RS15145	SM01322	H558_RS15145
H558_RS15165	SM00382	ATPases associated with a variety of cellular activities
H558_RS15225	SM00316	Ribosomal protein S1-like RNA-binding domain
H558_RS15225	SM00322	K homology RNA-binding domain
H558_RS15230	SM01387	H558_RS15230
H558_RS15315	SM01006	Siderophore biosynthesis protein domain
H558_RS15335	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS15395	SM00965	Secretin and TonB N terminus short domain
H558_RS15425	SM00990	H558_RS15425
H558_RS15435	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
H558_RS15460	SM00382	ATPases associated with a variety of cellular activities
H558_RS15475	SM00822	H558_RS15475
H558_RS15520	SM00028	Tetratricopeptide repeats
H558_RS15560	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
H558_RS15585	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS15585	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
H558_RS15590	SM00346	helix_turn_helix isocitrate lyase regulation
H558_RS15595	SM00248	ankyrin repeats
H558_RS15695	SM00267	diguanylate cyclase
H558_RS15705	SM00244	prohibitin homologues
H558_RS15765	SM00935	Outer membrane protein (OmpH-like)
H558_RS15775	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
H558_RS15820	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
H558_RS15985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
H558_RS15985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
H558_RS15995	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
H558_RS15995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
H558_RS16045	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS16050	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
H558_RS16050	SM00267	diguanylate cyclase
H558_RS16085	SM00382	ATPases associated with a variety of cellular activities
H558_RS16095	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS16100	SM00867	YceI-like domain 
H558_RS16125	SM00382	ATPases associated with a variety of cellular activities
H558_RS16140	SM00052	Putative diguanylate phosphodiesterase
H558_RS16160	SM01091	Transporter associated domain
H558_RS16165	SM00052	Putative diguanylate phosphodiesterase
H558_RS16165	SM00448	cheY-homologous receiver domain
H558_RS16170	SM00421	helix_turn_helix, Lux Regulon
H558_RS16170	SM00448	cheY-homologous receiver domain
H558_RS16175	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS16175	SM00073	Histidine Phosphotransfer domain
H558_RS16175	SM00091	PAS domain
H558_RS16175	SM00387	Histidine kinase-like ATPases
H558_RS16175	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS16175	SM00448	cheY-homologous receiver domain
H558_RS16215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS16215	SM00895	H558_RS16215
H558_RS16310	SM00382	ATPases associated with a variety of cellular activities
H558_RS16315	SM00382	ATPases associated with a variety of cellular activities
H558_RS16360	SM00382	ATPases associated with a variety of cellular activities
H558_RS16380	SM00984	UDP binding domain
H558_RS16405	SM00382	ATPases associated with a variety of cellular activities
H558_RS16425	SM00028	Tetratricopeptide repeats
H558_RS16440	SM00487	DEAD-like helicases superfamily
H558_RS16440	SM00490	helicase superfamily c-terminal domain
H558_RS16475	SM00382	ATPases associated with a variety of cellular activities
H558_RS16495	SM00382	ATPases associated with a variety of cellular activities
H558_RS16495	SM00448	cheY-homologous receiver domain
H558_RS16500	SM00091	PAS domain
H558_RS16500	SM00387	Histidine kinase-like ATPases
H558_RS16500	SM00388	His Kinase A (phosphoacceptor) domain
H558_RS16505	SM01230	H558_RS16505
H558_RS16510	SM00729	Elongator protein 3, MiaB family, Radical SAM
H558_RS16520	SM00052	Putative diguanylate phosphodiesterase
H558_RS16520	SM00267	diguanylate cyclase
H558_RS16525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
H558_RS16525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
H558_RS16585	SM00072	Guanylate kinase homologues.
H558_RS16590	SM01409	H558_RS16590
H558_RS16595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
H558_RS16595	SM00954	Region found in RelA / SpoT proteins
H558_RS16600	SM00382	ATPases associated with a variety of cellular activities
H558_RS16610	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS16610	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
H558_RS16650	SM00912	haemagglutination activity domain
H558_RS16660	SM00382	ATPases associated with a variety of cellular activities
H558_RS16705	SM00422	helix_turn_helix, mercury resistance
H558_RS16740	SM00257	Lysin motif
H558_RS16755	SM01207	H558_RS16755
H558_RS16815	SM00062	Bacterial periplasmic substrate-binding proteins
H558_RS16830	SM00382	ATPases associated with a variety of cellular activities
H558_RS16835	SM00382	ATPases associated with a variety of cellular activities
H558_RS16920	SM00344	helix_turn_helix ASNC type
H558_RS16945	SM00420	helix_turn_helix, Deoxyribose operon repressor
H558_RS16945	SM01134	H558_RS16945
H558_RS16975	SM00382	ATPases associated with a variety of cellular activities
H558_RS17060	SM00481	DNA polymerase alpha chain like domain
H558_RS17065	SM00986	Uracil DNA glycosylase superfamily
H558_RS17065	SM00987	UreE urease accessory protein, C-terminal domain 
H558_RS17075	SM00382	ATPases associated with a variety of cellular activities
H558_RS17110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
H558_RS17145	SM00464	Found in ATP-dependent protease La (LON)
H558_RS17150	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS17190	SM00530	Helix-turn-helix XRE-family like proteins 
H558_RS17245	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS17255	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS17285	SM00382	ATPases associated with a variety of cellular activities
H558_RS17290	SM00382	ATPases associated with a variety of cellular activities
H558_RS17330	SM00478	endonuclease III
H558_RS17330	SM01009	AlkA N-terminal domain
H558_RS17345	SM00342	helix_turn_helix, arabinose operon control protein
H558_RS17350	SM00014	Acid phosphatase homologues
H558_RS17365	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
H558_RS17370	SM00822	H558_RS17370
H558_RS17415	SM00116	Domain in cystathionine beta-synthase and other proteins.
H558_RS17415	SM01240	H558_RS17415
H558_RS17470	SM00382	ATPases associated with a variety of cellular activities
H558_RS17475	SM00382	ATPases associated with a variety of cellular activities
H558_RS17520	SM01211	H558_RS17520
H558_RS17635	SM00849	Metallo-beta-lactamase superfamily
H558_RS17705	SM00965	Secretin and TonB N terminus short domain
H558_RS17715	SM00382	ATPases associated with a variety of cellular activities
H558_RS17735	SM00937	H558_RS17735
H558_RS17770	SM00965	Secretin and TonB N terminus short domain
H558_RS17780	SM00382	ATPases associated with a variety of cellular activities
H558_RS17815	SM00271	DnaJ molecular chaperone homology domain
H558_RS17840	SM00226	Low molecular weight phosphatase family
H558_RS17845	SM00487	DEAD-like helicases superfamily
H558_RS17845	SM00490	helicase superfamily c-terminal domain
H558_RS17895	SM00829	Enoylreductase
H558_RS17915	SM00382	ATPases associated with a variety of cellular activities
H558_RS17915	SM00464	Found in ATP-dependent protease La (LON)
H558_RS17920	SM00382	ATPases associated with a variety of cellular activities
H558_RS17920	SM00994	ClpX C4-type zinc finger
H558_RS17920	SM01086	C-terminal, D2-small domain, of ClpB protein
H558_RS17955	SM00382	ATPases associated with a variety of cellular activities
H558_RS17970	SM00357	Cold shock protein domain
H558_RS18065	SM00316	Ribosomal protein S1-like RNA-binding domain
H558_RS18070	SM00267	diguanylate cyclase
