CWR60_RS00015    3394 ..    3417 +  -6.8  -2.97381   AGAACGCGTCAAAGA          GCTGG-ATTGA ACC TCGATGCCAGC          TGTGCTTGCTGTTCT  51 16
CWR60_RS00020 NONE
CWR60_RS00025    5157 ..    5194 +  -4.7  -3.29471   GAGCGCCAGGGCCTG   TCCGGGGTAGTGGATGCC TGA GGCC-CGGCTGCCGCGGA   TTGCTGTCCTGGCGA  49 5
CWR60_RS00030    6182 ..    6221 +  -8.4  -3.55801   GCTGAAACCGGGCGG  CGCG-TTGGCGCCCCTGTC GGC GGCTGGGCCGCCGATCCCG  TTTCAACACCTTAAT  62 36
CWR60_RS00035    6458 ..    6479 +  -7.3  -4.09685   CTCAGCAAGACGAAA           TCCAGGTGCG GTT CG-GCCTGGA           TTTTGCAACGTAAGG  67 116
CWR60_RS00040 NONE
CWR60_RS00045    6713 ..    6725 +  -2.7  -3.65046   GTCATGGGCACCATC                GAATT CTA AGTTC                TTCTTCAAGTCAGAA  53 28
         tuf    7971 ..    8005 + -18.1  -3.72893   AAGGCGCGGTTTTCC    CATGGATAGAGGGGCC GGAT GGCC-CTCTATCCATG     TTTGCTGGAAAAGTA  93 39
CWR60_RS00055 NONE
        secE NONE
        nusG    9101 ..    9119 +  -4.5  -4.07568   CGAACTCGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTTCAAACCCCGGG  62 7
        rplK NONE
CWR60_RS00075   10379 ..   10397 +  -3.1  -3.91716   TGCAGCTGTCAAAGA            CC-GCTGG AGCG CTAGCCGG             TTGTTTGGCGAATGC  58 89
CWR60_RS00080   11088 ..   11101 +  -2.3  -3.05384   GGCGGCCTGATCAGG               CTCCG CGTC CGGAA                TTCGCTGAACGACAA  41 31
CWR60_RS00085   11563 ..   11593 + -15.4  -4.81249   GACCTCGCGTCGACG       CCCGGGGACAGC GCTCTTA GCCGTCCCCGGG       TTTTTGCGTTTCCAG 100 41
        rpoB NONE
        rpoC   20121 ..   20144 + -16.8  -4.41494   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCTG 100 83
CWR60_RS00105   22201 ..   22225 +  -3.4  -3.02144   AGCCCCAGGCCAGCG          CCGCCCACTT CGTTC GAGCCGGCGG          TGTTGACGCGCGTAA  42 183
CWR60_RS00125   27333 ..   27346 +  -6.7  -3.18264   GGCACCAGCTCCACC               GTCAG GTGC CTGAC                TTCGTGGATCGACGA  52 77
CWR60_RS00140 NONE
CWR60_RS00145 NONE
        fusA NONE
         tuf   33518 ..   33543 + -14.7  -4.62203   AGCAGTACCCAACCA         GCGAGGGCGGT AGTC GCCGCCTTCGC          TTTTCGTTCTTTAGG 100 41
CWR60_RS00160   33915 ..   33954 + -20.2  -3.53091   TGTGGCGCAGCTCGT  GAAAAATGGCCGCATTCC CCCG GGAGTGCGGCCATTTTGC   TTTGGCGCGACAGCT 100 63
CWR60_RS00165 NONE
CWR60_RS00170 NONE
CWR60_RS00175 NONE
CWR60_RS00180 NONE
CWR60_RS00185 NONE
CWR60_RS00190 NONE
CWR60_RS00195 NONE
CWR60_RS00200 NONE
CWR60_RS00205 NONE
CWR60_RS00210   39032 ..   39054 + -17.8   -5.5112   CGCTCCGGCATGAAA           CGGCAAGAGC CTG GCTCTTGCCG           TTTTTTGTTCATCGA 100 70
CWR60_RS00230 NONE
CWR60_RS00235   43130 ..   43141 +  -4.4  -2.90992   CAAGGCGTAAGGGGC                GACA GACA TGTC                 TCGTTTGCAAGAGTT  44 31
CWR60_RS00240 NONE
CWR60_RS00245 NONE
CWR60_RS00250 NONE
CWR60_RS00255 NONE
CWR60_RS00260 NONE
CWR60_RS00265 NONE
CWR60_RS00270 NONE
CWR60_RS00275 NONE
        secY NONE
CWR60_RS00285 NONE
CWR60_RS00290 NONE
CWR60_RS00295 NONE
CWR60_RS00300   49025 ..   49040 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  44 3
CWR60_RS00305   49755 ..   49784 + -14.3  -3.59979   GCCTCACCCGCGCCA       GCCCGCTTTCGCCA TTT TGGCG-GGGCGGGC       TTTGCGGTAGAAACG  78 98
CWR60_RS00310   50893 ..   50921 + -21.7  -2.84218   CCGTAAGCAGTCAAG        CGCGGTGGGCGCG CCA TGCGCCCGCCGCG        ATGTTTTCATGCATC 100 35
CWR60_RS00315   51458 ..   51487 + -23.7  -4.56597   GCAGCGCGGAAAGCG       GCAAGGGCGGGTC TTCG GACCCGCCCTTGC        TTTTTGCGGCGCGCG 100 46
CWR60_RS00325 NONE
        dsbD   54407 ..   54460 +  -3.1  -3.04144   GCTCCTGACGTTGCT TCGTATC-GCCTCGGGCGCGC-CCG AGGCGA TGGCGTGGGCGAGAGGCTGGTACGA TGTTGCCCATACCAG  42 33
CWR60_RS00335   55659 ..   55669 +  -8.2  -2.70932   AGGCGAAGGTCGGCA                 CGCG GAA CGCG                 TCCTTGACCCGGCGC  52 207
CWR60_RS00350   58121 ..   58145 +  -4.1  -5.14563   CCCGTTGTCTATGAG          GGGGGAAGC CGATTGC GCGGCCCCC          TTTTTTCATGAACGC  83 111
CWR60_RS00355 NONE
        ccsB   61612 ..   61641 + -22.3  -3.54459   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 44
        cyaY   63984 ..   64037 + -17.3  -2.80816   CGACGTCGCTGCGCT TG-AGCGTGGCGCGGGCGCGGGCGGC GGT GCCGCTGGTGGCCACGCCACGCAGCA TATCGTCCATGACGA  78 513
CWR60_RS00385 NONE
CWR60_RS00390 NONE
CWR60_RS00395   69068 ..   69123 + -14.6  -5.14965   TTCGCCGTGCTTTTA TTCGCCGGCTCCGCGGCAGTCCAGGGG CAT CTGCTG-ACGGCAACGGGGCCGGCGGA TTTTTTCGTCCGCGT 100 120
CWR60_RS00410   74179 ..   74197 +   -16  -3.44848   GCTTCACCCAGTATG             CGCCGGTC ACC GACCGGCG             TGTTTCATGAAGCCG  82 142
         ssb   74815 ..   74830 + -10.4  -5.96521   CGCTGGATGCGAAAA              CCCTGC CCAG GCAGGG               TTTTTTTTGGTTCAT 100 57
CWR60_RS00425   78450 ..   78478 + -17.3  -2.72461   GAAATTCTAGGAGCG        GCGGGCGGGCCGC CTG GCGGGCCGCCCGG        GTTTACCCGGCATTG  80 31
CWR60_RS00430   79061 ..   79073 +  -4.8  -3.32844   GGGCTGGGCCGGGCC                GCGA TCGAT TCGC                TTATCCGCTGACCGC  49 2
CWR60_RS00435 NONE
CWR60_RS00440 NONE
CWR60_RS00445   82047 ..   82105 +  -9.6  -3.28924   GCACCTGCACCGCCA CGTCGCGCGTGACGCCCAGGCGTTGCAGG GTGT CCTGCAATAC--GCGC-TCGCGCGCGCCG TTCTGGCGCGGCATG  63 297
CWR60_RS00455 NONE
CWR60_RS00460   85523 ..   85533 +  -3.2   -2.9627   GGGATCTTTCCTGCT                 GGCA GTG TGTC                 TATGTACTACATTCA  42 136
CWR60_RS00465 NONE
CWR60_RS00470 NONE
CWR60_RS00475 NONE
CWR60_RS00480   89712 ..   89735 + -17.4  -3.97331   GACACGATTGTCCTG          CCGGCGGGCG AGGC TGCCCGCCGG           TTCTTTGCCTGGATT  95 44
CWR60_RS00485 NONE
CWR60_RS00490 NONE
CWR60_RS00495   92921 ..   92938 +  -9.9  -3.72576   TCATGATTCCCTCTT             TTCGCAC GATC GTGCGAA              TTTGATCGAAAAAAA  71 296
        glcC   97349 ..   97378 +  -2.1  -3.73775   CGGAGGTGTTGAACG       CC-TCGTACTCGAT GCC GTCGAGCGTGAAGG       TTTCGTAGCCCTCCA  53 525
CWR60_RS00540  101701 ..  101716 +  -4.6  -2.53382   CCGCCGATTGACAAG              CCTGGC CGGC GCTGGG               TAGATTGCGCCTACT  42 30
        dapA  102897 ..  102935 + -10.9  -3.73224   AGCGGGCGCATACCT  CGCTTGAAGGCGGCGGCC GCAT GGCCGCCGTCG-CAGGGG   TTTCATACCCCATCG  73 39
CWR60_RS00550  110722 ..  110743 +  -2.3  -4.24338   TGTCCGCGCAGGAAT           AGATTCAGA ATGC TTTGAATCG            TTTTGCAATATTTTT  62 95
CWR60_RS00555 NONE
CWR60_RS00560  112444 ..  112464 +  -3.2  -4.05788   GCCGCACGCATACGC           TGATGCGGC CCTA GCCGCC-CA            TTTCCTTTGCCACAC  59 12
CWR60_RS00565 NONE
CWR60_RS00570  115687 ..  115741 +  -2.8  -3.21099   CAGCGGCCGCAGGCG CGGTA-CGTCCTGCCCCAGCGCGC TATAGACGC GCGCGCCCGT-CAGGATGGTGCCG TTGATGGTCGACAGC  43 428
CWR60_RS00585  119461 ..  119477 +  -7.2  -3.65991   TATTCACGGGTTCGC              CGCGGC GCGTG GCTGCG              TTATATTCCGACACT  61 59
CWR60_RS00590  120851 ..  120881 + -13.8  -3.90112   TATGAGACAGGGCAG       GGCCGCGCCGCCGC CAG GCGGCCCGGCGGCC       TTTCCTTGAAAAACC  84 36
CWR60_RS00600 NONE
        aspS  123871 ..  123903 +  -9.8  -3.64703   GCCAGCGGCCGGAAT     CGGGCA-GGCCGGGC AACG GCGTGGCTTTGCCCG      TTTCGATAACGCGCC  70 81
CWR60_RS00610 NONE
        clsB  126086 ..  126098 +  -6.2  -3.14132   CGCCGGCCAGGATGC                GCGG CGTCA CCGC                TTCGTCCAGGAACCA  50 115
CWR60_RS00635 NONE
CWR60_RS00640  131287 ..  131297 +  -3.2  -3.10164   CGGCGATTCGGGCAT                 TCGG CGG CTGA                 TTCCCTGGTGGGTAC  44 15
        asnB  133288 ..  133299 +  -2.2  -4.09685   GGATGCGGCAGACAT                TCTG ATTG CGGA                 TTTTCCCGAGTACAG  58 21
CWR60_RS00650 NONE
CWR60_RS00655 NONE
CWR60_RS00660 NONE
CWR60_RS00665 NONE
CWR60_RS00670 NONE
CWR60_RS00675 NONE
CWR60_RS00680 NONE
CWR60_RS00685 NONE
CWR60_RS00690 NONE
CWR60_RS00695 NONE
CWR60_RS00700 NONE
CWR60_RS00705  148106 ..  148117 +  -7.2  -2.52896   TGATCGCCAGGTTTC                GCGG CTAG CCGC                 TGCCTTACAGGATCG  47 18
        asnB NONE
CWR60_RS00715 NONE
CWR60_RS00720 NONE
CWR60_RS00725  153482 ..  153493 +  -7.2  -3.54307   TCGATCTAGTTCGGG                GCGC TGGC GCGC                 TTTGCCGACCGTATT  58 398
CWR60_RS00745 NONE
CWR60_RS00750  160154 ..  160168 +  -4.2  -3.06162   CGGGCTGGCTAGGCG               TACGTC ACC GACGCA               TATTCCCGTACGATC  44 50
        waaC  173516 ..  173542 +  -7.8  -2.89683   GGTCGAGCAGGCCCT         GGCGGCGGCCTG ACA TGGGCCGCGGCG         TCTATACCCTGGCGT  52 13
CWR60_RS00815  175240 ..  175254 +  -6.4  -3.60627   GGGAACAGTTCAGCG               TCTTGG CGG CCAGGA               TTTCCGCTGGCGTGG  57 443
CWR60_RS00840 NONE
CWR60_RS00845 NONE
CWR60_RS00850 NONE
CWR60_RS00855 NONE
CWR60_RS00860  181981 ..  181994 +  -2.4  -3.51934   TGACCCGGCCCGCGT               TGCA TCACGT TGCA                TGTTTGTAAGCGCAA  48 38
CWR60_RS00865 NONE
CWR60_RS00870  184314 ..  184339 + -13.2  -3.61178   CTGTAGCGGCCGGCA         GGCGGGCGGC CCTGGC GCCGCCCGCG          TTTCGCGTCCCTCGC  77 35
CWR60_RS00875 NONE
        lipB  185349 ..  185371 + -10.5  -3.31792   CTTTTTTGTCTCGAA           CCGGACCGC GCCTG GCGTTCCGG           TTGTGAAGGTGCTCA  63 49
        lipA  186424 ..  186444 + -12.5  -2.60496   ATAGGTATCGGCCCG            CGCCAGCGC CAC GCCCTGGCG            GTCTTTCACCGACAG  64 61
CWR60_RS00910  190485 ..  190507 +  -6.9  -2.71011   CCGTGTACAGGCGTC           GCGCGCCAA TGTTC TCGGTGCGC           TCGTTGACCGAGAAT  46 223
CWR60_RS00940 NONE
CWR60_RS00945 NONE
CWR60_RS00950  197731 ..  197787 +  -7.8  -2.91264   AACTCGCCGCCGCCT TGCGGCCCTG-AC-GGCGCTGGGCGCGC TGT GGGCGGCCGGCGCCGGTGCGCATCCGCA TATGTGGATCGACGC  52 15
CWR60_RS00955 NONE
CWR60_RS00960  199360 ..  199372 +  -4.7  -3.99955   GACGAATTTTGCACG                CCCGG GTG CCGGA                TTTAATTGGTATGTT  61 56
CWR60_RS00965  201850 ..  201873 +    -3  -3.85698   GGCGCCGGCGGCAGC          CAGTTGCGGG CGCG CCTGCAACCA           TTTGTCCAGCGCGGC  56 362
CWR60_RS00995  207416 ..  207434 + -17.4  -3.75153   TCCCGTGTCGCGAAA             CGCCCCGC CTG GCGGGGCG             TTTCGCTTGGCCGCG  91 48
CWR60_RS01000  207754 ..  207768 +    -7  -3.08371   GCCGCAATAACTGAG               GGGCGC ACG GCGGCC               TGTCTTGGCCATGTC  52 27
CWR60_RS01005  209070 ..  209103 +  -9.6  -3.34005   ATGAAGCGGGAAAGG     CGAGTACGCGCCGTG CGGAT CATGGCGC-TACGCG     TTGTCCGGCTTCATT  61 223
CWR60_RS01010  210592 ..  210618 + -13.6  -2.78384   TAGCACAATAGGGGC         GGGGCCGCGCCA TCG TGGCGCTGCCCG         TCTCATACCAAGGAG  67 47
CWR60_RS01015 NONE
        metF  211933 ..  211945 +  -6.2  -3.01924   GAAGCGCTCGAACGC                GGCC AGAAA GGCC                TGTTCGGCGGCGCTC  48 140
CWR60_RS01045 NONE
CWR60_RS01050  219689 ..  219705 +  -2.9  -3.53012   CCAGCTGCGAAAGCG              CGTCG AGCAGGC CGGCG              TTTACCAGGAAGCGC  47 216
CWR60_RS01080  226156 ..  226181 +  -4.7  -3.53012   CAGCCGTACCTTCTG         CCGCCATTG-GC CCA GCGTAATGCCGG         TTTCGCCGCGAAAGC  52 193
CWR60_RS01090 NONE
CWR60_RS01095  228218 ..  228240 +  -4.7  -3.53224   GCCAGCGCCACCCCG           GCCAGCGTG GCGTG CACGCCGGA           TTTCAGGACGAAATA  52 523
CWR60_RS01105 NONE
CWR60_RS01110  230566 ..  230611 + -12.5  -3.21912   CTGGCGCAGCGCGGC CGGCCAGC-CTGGCGCTGAGCG GGC CGTTCAGTGCCAGAGCAGCGCG TTCATGGCTTCGACC  71 8
CWR60_RS01135 NONE
CWR60_RS01140  235204 ..  235240 + -18.6  -2.81547   GGCGCTGCATGGGGC    GCTGCAGCGCCGCGGC GCCTA GCCGCCGCGCGGCGGC    TCATTCGTATGAGCG  89 420
CWR60_RS01185 NONE
CWR60_RS01195 NONE
CWR60_RS01200  246843 ..  246885 + -18.6  -3.33696   CATGAAGCACTGATG CGGTACG--GGGCGG-CGGCC CGCA GGCCGTCCGCCCCGCGTACCG TTCATTCCAGGCGGA  93 28
CWR60_RS01215  250193 ..  250217 + -14.9  -2.90075   CGCCGGTGTCGATTT          CGCTGGCGGCC TGA GGCCGCCGGCA          TATGGTTCGAACGCC  73 12
CWR60_RS01220  251775 ..  251789 +  -2.7  -3.72576   AGGCCTGGCCGGACA               GCGGC AAAGG GCCGA               TTTCCTGCAGCAAGG  53 464
        kynU NONE
CWR60_RS01250  256699 ..  256723 + -14.2   -3.7732   GGCCGAGCGCGAGGC          CGAGCGCGCC TAGGC GGCGCGCCCG          TTCTTGATGTCCGCG  83 13
CWR60_RS01255  257983 ..  257997 +    -7  -2.62983   CGAAGCGCGCCAGCA               GCGCCG GTT CGACGC               TGATCTCGGCCTGCC  48 293
CWR60_RS01280  260992 ..  261019 + -21.4  -3.02324   GCACCGTGTTGATTC        GGTGCCTGTCCC GACA GGGACAGGCACC         TGTGCTTTCGATCAG 100 57
CWR60_RS01295 NONE
CWR60_RS01300  265353 ..  265403 + -24.7   -3.6579   GAGCGATCGACAGGT CGGCGGCGCCTGGCCGATGGCGGC CGGG GCCGCCGCCGGCCAGGCGG-GCTG TTGTTAGAATCCCTT 100 39
CWR60_RS01305  266201 ..  266215 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 128
CWR60_RS01320  269024 ..  269038 +  -8.5  -3.14132   AGCAGCACCAGCATG               CCGCC GCACA GGCGG               TTGATCCAGCGCAGG  56 123
        rsmB NONE
CWR60_RS01335 NONE
CWR60_RS01340 NONE
CWR60_RS01345 NONE
        trkA NONE
CWR60_RS01355  277587 ..  277605 + -10.2  -2.76964   AGCGGCGCGCGCGGC             CGCTGCCG GCG CGGTGGCG             TACTATTCAGTGTAC  57 39
CWR60_RS01360  278659 ..  278672 +  -5.2  -2.90075   GGCGGCAATGTCGGC               CCGC ACCTGC GCGG                TCTGGTTGGCGCCGA  44 498
CWR60_RS01370  280063 ..  280098 +  -2.3  -3.54424   CCGGATGCCGCGGGC    CGCTGGCCGGGCGCG TAAAGT CCCGCATGGCAAGGG     TTTCGGCGCGTCCCG  48 166
CWR60_RS01375  281332 ..  281346 +  -6.4  -3.90112   CGCCAGTAGATTCGT               GGTGAG CGT TTCACC               TTTCATTCGAGCCGG  64 150
CWR60_RS01385 NONE
CWR60_RS01390 NONE
CWR60_RS01395  284815 ..  284826 +  -7.2  -3.68351   TGGATGCGGCGATCT                CGCC GTCT GGCG                 TTTCGCTGGTGACGC  64 322
CWR60_RS01420 NONE
CWR60_RS01425 NONE
CWR60_RS01430 NONE
CWR60_RS01435  294210 ..  294242 +  -6.2  -3.57144   GCCGTTGCGGGTGCG     GCTGGACTGGACGCC CTGG GGCGTGCAGGC-GGC      TTTCCACCTGGCGCA  56 173
CWR60_RS01445 NONE
CWR60_RS01450 NONE
CWR60_RS01455 NONE
CWR60_RS01460  299022 ..  299041 + -13.6  -4.52589   ATAGTGGTTACCTGC            CGGGCGTT TGGT AACGCCCG             TTTTATCTAAGGGAA 100 37
CWR60_RS01465  300850 ..  300871 + -10.1  -2.81133   CCCAGGGCGCGCACA           TCCTCCAGC AGGC GCTGGGGGG            TCTCGTAGGTCAGTG  56 273
CWR60_RS01475  302380 ..  302398 +    -3  -3.68351   GTCCGCCCAGGCCAA             GGCTGGCA AAA TGGCGGTC             TTTCCGTCATGCACG  53 42
CWR60_RS01480  303365 ..  303376 +  -3.6  -3.27476   CGGGATCTGCGTGAG                GTCG ATGC CGGC                 TTCGTGCTTGAACAT  47 482
CWR60_RS01510 NONE
CWR60_RS01515 NONE
CWR60_RS01520 NONE
        moeB  311085 ..  311113 +  -7.9  -3.27774   GCATTGCGCCTAGGC        GGGGCGCATCCGG CGG CCGGGGCCGCCAC        TTCCTGATTCAAATG  56 28
CWR60_RS01530 NONE
CWR60_RS01535  313393 ..  313414 + -18.7  -4.07568   GTCGATTTGCCGTGC           CGGGCGCCC CGCG GGGCGCCCG            TTTTCCGCGCCGGGC 100 75
CWR60_RS01545  316279 ..  316298 + -11.4  -4.72272   GGCCGGCGCAACCGG            GGCAGCCT TGCG GGGCTGCC             TTTTTCATGGACGGG 100 64
CWR60_RS01550  317321 ..  317348 + -14.1  -2.77899   GATGCGCGCGCCTAG        GCGCGCCTGGC GCTAGA GCGAGGCGCGC         TGCTTGATCGAGAAG  69 26
CWR60_RS01570  321924 ..  321958 +  -8.5  -3.06183   TCGGCCAGCCATTGC     TTGCGCGCCGACC ATACCGGCA GGACCGCGCGCAA     TTCCGTGCCGATGCA  55 501
CWR60_RS01595  326358 ..  326378 +  -8.2  -3.12999   GCCGGGTATGAGTGT            GCGAGCCG CCGGC CGGCTCCC            TTACCTGTCGGATAC  56 101
CWR60_RS01600 NONE
CWR60_RS01605  327567 ..  327592 + -13.3  -5.15969   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG 100 108
CWR60_RS01620 NONE
CWR60_RS01625 NONE
CWR60_RS01630 NONE
CWR60_RS01635  336747 ..  336762 +  -7.5  -3.14211   GGTGCCCCGGCCTCG              CGGCG CGTATC CGCCG               TTGCTCGCGCGCAGT  54 62
CWR60_RS01645  337712 ..  337733 +  -2.1  -3.07291   CTGAGCGCTACACAC           CGGTTGCGT CGGT GCGAATCCG            TTCAATCGACTACTT  41 162
CWR60_RS01650  342896 ..  342924 +   -11  -3.34803   TGAAGCGGTGGATCA       CGGC-CCGCC-TGC CTC GCGCGGCGGCGCCG       TCTCTTTGCGTTTTT  66 38
CWR60_RS01655 NONE
CWR60_RS01660 NONE
CWR60_RS01665  347842 ..  347866 +  -2.7  -3.59979   CGCCTAAGGAGTAAC          CCTGCAAATCG CCG CGTTATGCAGA          TTTCGCATAACCGGC  49 27
CWR60_RS01675 NONE
CWR60_RS01680 NONE
CWR60_RS01685 NONE
CWR60_RS01690  352106 ..  352122 +  -7.9    -3.273   CCGTTATCCAATACT              CAGGCGG TAG CCGCATG              TCTTCCCTTTTCTAC  56 41
CWR60_RS01695  353050 ..  353060 +  -8.2  -3.04792   GGTTGTCGCGCCACA                 CGCC TTC GGCG                 TGTTCCACGTCATGG  55 95
CWR60_RS01720  358098 ..  358117 +   -15  -3.62046   CCGTCGAGCAAGCCC            CAGGCGGC GCCG GCCGCCTG             TTGTTCCCGCCATGG  83 166
CWR60_RS01730  359753 ..  359767 +  -2.7  -3.73775   GCAGGCATGCCACTT               CCAGC ACTTC GCGGG               TTTCGTACAGGTCGA  53 465
CWR60_RS01790 NONE
CWR60_RS01795  374022 ..  374038 +  -5.7  -3.17075   GCATGCGCACGCGCA              GCCAGGT CGT GCCGGGC              TTGCATTCGAGCGCC  50 406
CWR60_RS01830  380971 ..  380993 + -17.7  -3.51924   GTGTGACGCCGGGGG           CGGGCGCGC AGGGC GCGCGCCCG           TTGTCTCAGTGGCAG  90 35
CWR60_RS01850 NONE
CWR60_RS01855 NONE
CWR60_RS01860 NONE
CWR60_RS01865 NONE
CWR60_RS01870 NONE
CWR60_RS01875 NONE
CWR60_RS01880  389919 ..  389951 +  -2.6  -3.29461   GCGTACCTGGGAATC     TGA-AC-GCCCGCCGG TAT CCGGCGGCCTGAATCG     TTATCGCGAGGCTTG  44 23
CWR60_RS01885 NONE
CWR60_RS01890 NONE
CWR60_RS01895 NONE
CWR60_RS01900  393193 ..  393236 +  -2.2  -3.59262   TATCGGCCTGCGCCA TCCTGCCAGGGGGGGCTGGCG TTG CGCC-GCCGCATATCGTAGGG TTTCGGCCTGTCGCC  48 195
CWR60_RS01905  394018 ..  394066 + -14.6  -2.61274   CGAGGACGCAACCCG GCCAGGCCTAGCGGCAGCATGCGC GTG GCGCATGCTGCCAC-GCGTC-GGC ATTCATTCACATCGG  71 15
CWR60_RS01910 NONE
CWR60_RS01915  396790 ..  396800 +  -2.4   -4.1891   AGCTTCGCGCGAAGT                 AGCG AGA CGCC                 TTTCTCTTCCGCCAA  61 473
CWR60_RS01930 NONE
CWR60_RS01935  400730 ..  400740 +  -4.6  -3.06133   GATGCGGGCGGAACA                 CGTG CGC CGCG                 TTCGATCACGGCTTG  45 65
CWR60_RS01940 NONE
CWR60_RS01945  402262 ..  402281 +  -4.3  -3.53091   TAATCCTTGGCGGTC            GCTGTTA CAAAAT TAGCAGC             TTTGCGCCGGGCGCT  52 481
CWR60_RS01955  403617 ..  403643 + -11.5  -3.58231   GACCCCGCCTTCGCG         GCGGGCGTTCG TGCGC CGGGCGTCCGC         TTGTGTCCATTCTTT  72 53
CWR60_RS01960  404764 ..  404774 +  -2.4  -3.14344   CGATCTGTGATGCGC                 GGGC GAT GACC                 TTGCTCAAGGACCTG  42 31
        prmC NONE
        grxD NONE
CWR60_RS01975  406543 ..  406563 + -14.7  -3.98913   CGCGCCCGTACCGAA            GCCTGTCCC CGT GGGGCAGGC            TTGTTTGCGTCTGAG  88 58
CWR60_RS01980 NONE
CWR60_RS01985 NONE
CWR60_RS01990 NONE
CWR60_RS01995  410207 ..  410222 +  -7.5  -3.15249   GGACGATGCGCTGCT              GCGCG GCCAGG CGCGC               TTCCTGGACGATATC  54 83
CWR60_RS02005  413722 ..  413754 +  -2.6  -3.68529   AGGGGTTGTGGGCGA     TGG-CGGCCTGCAGC AAAT GGTGCGCGCTGTCCA      TTTCGGTCATGGGGT  53 455
CWR60_RS02030  419053 ..  419095 +  -3.5  -4.07885   GCCGAACTCGACGAA GCGCTGCTGGCCGCCG-CTC ATGCTG GAGACGG-GGTCA-TGGCGC TTTTGCGCCAGGATG  60 390
CWR60_RS02060  424505 ..  424543 + -10.1  -2.73875   CTGAGCGCGGGTATC  GCAGTGGCCGGCGCGCGC CCGG GCGCGCGCC-GCTTCAGG   TCGTATTCCGAGGAA  57 37
CWR60_RS02065  425989 ..  426016 + -15.6  -3.61398   GGCCTGACGCACGCG        GATGCGGCGCGCC TCA GGC-CGCCGCGTC        TTCTTCCAGCCAGGG  83 34
CWR60_RS02080  427701 ..  427743 +  -8.3  -3.09015   AAAGCTGAAGCATCA TTC-CCGCGTGCCTGTCCCC GCAC GGGGAGTGGCACGCGCCGAC TTGGGTGCCTGTCCC  56 33
CWR60_RS02115  433014 ..  433028 +  -4.2  -3.72893   CAGGGTGCGCGTCAG               GCCG ATCAGCC CGGC               TTTGGTCGCCGAATA  55 352
CWR60_RS02140  439753 ..  439791 + -14.5  -3.16881   GGCACGCGGATGTCG  GCGTCATCGCCGGCGCGC CGCT GCGCGGCG-CGGTGCCGC   TTGATCAGCTCGATC  77 217
        queC  443520 ..  443533 +  -4.5  -2.82623   GCATCAGGACGGTGT               CGCGCC ATT GGC-CG               TGCTTGTAGCCCACC  44 126
CWR60_RS02160  445303 ..  445317 + -12.8  -2.82491   CCTCGAACGTCCACT               CGCCGC CCA GCGGCG               TGTCGTAGGTCTGTA  63 268
CWR60_RS02185  450576 ..  450602 + -12.3  -2.58544   CAGCACCGCCAGCTC        GGCCGCGGCCAC GGCG GTG-CCGCGGTC         ATTGTGCGGGTGCAC  62 285
CWR60_RS02195  452174 ..  452217 + -11.7  -3.33814   CGGCGCGGCGCGAGC CGCCGG-CCTGAGGCGCCGGCG GGG CGTCG-CGCC-CGGATCCGGCG TATTATCTAGCGTTT  68 15
CWR60_RS02200  454133 ..  454190 +   -10  -2.80816   CTGACCGCCACCAGG CTTGCGTAACGGACGCGGTTTCCTGCCCC CTG GGGGCAGGAAA-CGTGTCAG--GCGAAGG TCTGCTCCATCAGGC  59 37
CWR60_RS02235  464282 ..  464295 +  -3.7  -2.87344   GCGCCCTGCGACCCG               GGCGC GCCC GCGCA                TCTGTAACAGGGATG  43 114
CWR60_RS02240 NONE
CWR60_RS02245  466423 ..  466454 +  -4.4  -3.72576   CAGGGGGGCGCACGG      CGGCGCGGCGC TACGCTACACT G-GCCGCGCTG      TTTCGTCCGCGAGCG  55 92
CWR60_RS02250  467852 ..  467883 +  -9.4  -3.29144   CCAGGCGGTCGATGC      CGCTGCCGGCCGC CGCCAGC GCGGCCGCCA-CG      TTGTCCAGCACCTGG  59 209
CWR60_RS02260  469116 ..  469131 +  -8.2  -3.09273   CCTGATCCTGGTGGG              GGCCGC TGTG GTGGCC               TATCTATTGGCGCGC  56 199
CWR60_RS02265  470093 ..  470117 +   -15   -4.7497   CACCCTTGTGAAAAA         CCCCGCC-GGC GCAG GCCTGGCGGGG          TTTTTCGTGGGTGGA 100 52
CWR60_RS02285 NONE
CWR60_RS02290  473834 ..  473844 +  -3.2  -3.51934   GTGATACCTTGGTTT                 GCAT GCG GTGC                 TCTTTGTGGAAGGCA  49 216
CWR60_RS02295  478862 ..  478879 +  -6.9  -3.14931   CATTCCGATCTTCCC             GGGGCGT GGGC ACGCCGC              TTGCTGGGGCGTGGG  52 82
CWR60_RS02300 NONE
CWR60_RS02305  479316 ..  479332 +  -3.5  -5.00616   ACGCTGTCCGGCATC              GCGCCGG GCG CAGGCGA              TTTTTTCAAACGCAA  81 127
CWR60_RS02310  484974 ..  485010 + -13.5  -3.09785   GTGGCGTATTGACCA    GAGGCCAGGCCGGCCGC TCG GCGGCCGGCATTGCGGC    TATATTGGCGTATGC  72 29
CWR60_RS02315  485735 ..  485750 + -11.8  -5.10461   GCCCACGTTTTGAGA              CGGCCC TTAC GGGCCG               TTTTTCTTGCGTGCG 100 157
CWR60_RS02320 NONE
CWR60_RS02325 NONE
CWR60_RS02330 NONE
CWR60_RS02335 NONE
CWR60_RS02340 NONE
CWR60_RS02345  491458 ..  491485 +  -5.5  -3.14132   CCTCCGTGGCGCGCG        CGCCGCCAG GCTGCGTAAA CTGGAGGCG         TTCCTGGACGAAGCG  49 53
CWR60_RS02350  492636 ..  492653 +  -3.3  -3.28712   GCTAGCCTGCGAGAG             TGACAGC AGAT GCAGTCG              TTCTACCAGGAGCCA  46 108
CWR60_RS02355  493950 ..  493981 +  -5.8  -4.03234   TCAGGTCGCGCACCA      GTTG-CGCCAGCC TGGCCGC GGCGGGCGTCAGC      TTTCTATGCCGCAGC  66 77
CWR60_RS02365 NONE
CWR60_RS02370 NONE
CWR60_RS02375  497762 ..  497812 +  -8.2  -2.52896   GCCCGCCAGGCATCC TGGCG-GACCGGTG-CGGCGGCGG TGCGT CCGTCACCGGCGCATGTCGCGCCA TCAGTTCCACGATCC  51 62
CWR60_RS02385  499364 ..  499409 +  -9.9  -3.05384   CTCATTCTTATGTAA TGCGTCACGCGCTAC-TATT CGCTCAA ATTAAGTAGCGCGTCACGCA TTACATGGGCAAGAG  60 140
CWR60_RS02395  504374 ..  504386 +  -4.8  -3.39068   CTGCGGCGCGTCACG                CGCT ACATC AGCG                GTTTTGTTAAAGTGA  51 105
CWR60_RS02400  505512 ..  505536 +  -4.9  -3.62522   CAGAACCCCGAGGCA          GGCATTCGC CACGCGT GCGAGGGCC          TTCTTCAAGCGCTTC  54 451
CWR60_RS02425  507325 ..  507349 +   -15  -4.30719   CGCATCGCCCTCCAA         GGCCGC-CCGG CATG CCGGCGCGGCC          TTTGTTCTGCGCGCG 100 87
CWR60_RS02430  508767 ..  508788 +  -6.5  -3.28712   GCCGCTGACCAGGTC           GGGCATGAGC GCG GCGC-TGCCC           TTGTAGGGCACCGGC  52 447
CWR60_RS02450  513253 ..  513269 +  -4.3  -3.19463   GGAATCGTCGCCGAA              TCCGGGT TCA GCGCGGA              TTCGTGAATCATCGC  47 2
CWR60_RS02455 NONE
CWR60_RS02460  516205 ..  516250 +  -8.7  -3.14132   CTGCGCCAGGGCCGC GGCGCTGGACCGCGTGGCCGG CAAT CTGGCGAACCGGACCGCCGCC TTGATCGCGCCGGCG  56 240
CWR60_RS02475  519411 ..  519423 +  -3.3  -3.50853   TTGTACTGAAGAAAT                CCCCT TCT ATGGG                TTCTGATTGCGCCAC  49 180
CWR60_RS02505  524175 ..  524190 +  -3.2  -3.59979   ATCTAAATGACCATG              CGCTAG CCCG CTAGCA               TTTGCCGTAAGGAGA  49 379
CWR60_RS02510 NONE
CWR60_RS02515  526828 ..  526846 +  -5.2  -3.14693   ACGAACTCTCTATCC             TGCCGCAG CAG CTGTAGCA             TCTATTGCTCGTAGA  49 9
CWR60_RS02520 NONE
CWR60_RS02525  529825 ..  529839 +  -8.6  -4.17023   CCCTTCACCCTTAGG               CGAAAG GCC CTTTCG               TTTTGGAGTGGTTCA  76 157
        htpG  533612 ..  533626 +  -5.6  -4.09685   CCGGCGATGAAGTCG               CGGCCT GCC AGGGCG               TTTTCCAGCATCAGG  63 490
CWR60_RS02570  537450 ..  537495 + -11.1  -3.71848   GCGGGGATAGCTGCC CCGATACAAACCGGCAAACGC TGCG GGGTTTGCCGGTCTGTCCTGG TTGTTACTCGGCAAG  73 109
CWR60_RS02595  540995 ..  541018 +  -6.6  -3.35679   GCAGCCTGGCCGAAG          GGGCGGCC-TG AGG CGCGGCCGGCC          TTCTCCATCCACGAA  55 15
CWR60_RS02600 NONE
CWR60_RS02605 NONE
CWR60_RS02610  544312 ..  544351 + -15.7  -2.78715   ACTGAGGCTGCGCGA CTGCCC-GC-CCGCCGCGC GTGC GCGCGGCGGCGCTGGGCGC  TATAATGCGCAGCTT  75 36
CWR60_RS02615  544530 ..  544542 +  -3.3  -4.63044   AAGTGTGATCCGAAA                GCGGA TTG TCCAC                TTTGTTTGTGTCGCT  71 82
CWR60_RS02625  545962 ..  545976 +  -2.9  -3.12884   TCATGACTGGCTCTT               TTGAT ATTTC ATCAA               TATTCGCTCCTATTT  44 22
CWR60_RS02630 NONE
CWR60_RS02635  547683 ..  547696 +  -4.5   -3.4582   CGTGATCTTGGCTCA               GGCAT TCAT GTGCC                TATTTAATAAACTAA  51 5
CWR60_RS02640 NONE
CWR60_RS02645  549630 ..  549645 +    -4  -3.78022   CGGCAACCTCTTACT              GGGTAA TTGA TTATCC               TTTGATGAGTATAGG  57 153
CWR60_RS02655  551960 ..  551976 +  -6.6  -3.20322   TATTTTTTCAAAGGG              CAGTGA AAAAA TCACTG              TATATTCTAATAAAG  51 87
CWR60_RS02660 NONE
CWR60_RS02665 NONE
CWR60_RS02670  554301 ..  554323 +  -8.4  -4.09685   TTGGCTTGCTAGGCT           GGATATAGCG GAT CGCTATGCCC           TTTTACGCCATCACC  72 385
CWR60_RS02680  555384 ..  555399 +  -6.2  -4.46854   TTTAACTGAATTAAA              CATTCA TATT TGAATG               TTTATTGTTAAATCG  76 103
CWR60_RS02685 NONE
CWR60_RS02690  557450 ..  557480 +  -5.3  -3.73068   GCCCAGGCCTATGCC       GGCCACGACCAGC TGGAT GCTGGTGGTGGAG       TTGTTCGCTTCGACC  58 340
CWR60_RS02700 NONE
CWR60_RS02705  561416 ..  561460 +  -7.8  -3.68222   GGGATGCGTCGCGGT GGAC--GGGCGCGCGCTGTC GGGTTGA GACGGAGCGCGCCCAAGACC TTATTCAAGTTCGAC  63 1
CWR60_RS02710  562237 ..  562265 +  -8.1  -3.28924   GGCAGCGGCGGTTCG       GGGCAGGGCGCG CGCAGA CGGG-CCTGCCC        TTCTCGAGCAGGATG  56 40
CWR60_RS02715  563512 ..  563549 +   -12  -3.66874   GGCTTGCCGGCAAGG  CCGCGCCG-GCGCGTGAT CTCC AGCGCGCGCACGGC-CGG   TTTCCATGGCGTTGC  75 262
CWR60_RS02720 NONE
CWR60_RS02725 NONE
CWR60_RS02730  566987 ..  566997 +  -5.4  -2.94924   GTACAAGGAATGAGC                 CTCT GGT AGAG                 CTTTCTCCATCCAGG  47 28
CWR60_RS02735 NONE
CWR60_RS02740  569653 ..  569679 + -19.6  -2.88571   AGCCGGCGCCCGTGC         CAGGGTGTTCAC ATT GTGAACACCCTG         CTTCTGTTTCACGAG  95 60
CWR60_RS02750 NONE
CWR60_RS02755 NONE
CWR60_RS02760  574005 ..  574015 +  -8.2  -3.29144   GGTCGGTGACGGCGG                 GGGC CGA GCCC                 TTGTAGGGCACGTGC  59 454
CWR60_RS02785  579017 ..  579030 +  -3.1  -3.27475   TGCAGGACTGAAACA               TACCT GAAC GGGTA                TCTTGTCCTCCAGGC  46 92
CWR60_RS02790  579771 ..  579796 +  -7.5  -4.09739   AGCCGGAAGATCATG         GCCGCGATCCGT TCC GCGGACC-CGGC         TTTTGCCCGGCTTGC  69 340
CWR60_RS02810  583339 ..  583358 +  -5.6  -3.02144   ATCCTGCAGAAGTAC            CCGGTAGG CTGA CCTGCCGC             TGTTCGAGAACATGC  47 14
CWR60_RS02815  584050 ..  584090 +  -4.6  -3.06696   TCGCGGCCGCTCATG CGCC-GGCCCGTGACCAGGT AGT ACATGG-CGCGCGCCAGGCC TATCTTGCGCGGCAG  46 335
CWR60_RS02835  588608 ..  588621 +  -2.3  -2.85078   CAATTCTTAAATTGA               CGCGA ACCA TGGCG                GTTTCGTCCAATGTG  40 99
CWR60_RS02840  590164 ..  590181 +  -3.3  -3.05935   CGTGCACAGCTGCGT             GAACTCG AAGT CGGGCTC              TTCGCTGCGCAGTAT  43 484
CWR60_RS02860  593985 ..  594021 + -20.8   -4.3586   GACGCTGCGCGAGGC    CGGTTGACGGCGCCGG CACGC CCGGCGCCGCCGGCCG    TTTTCCTATGAATCG 100 19
CWR60_RS02865  595403 ..  595422 + -10.6  -3.24747   ACAGTTCGGGATACA            CCAGGGCC GGCA GGCCCAGG             TTGATGCTGTCGCGC  60 338
CWR60_RS02880  598083 ..  598110 +  -9.7  -3.15544   ATCCCGCCGGCTAGC        GCCGCGCCGGC ATGGCG GCCGGCCCGGG         TTGGTCAGGATCGCG  59 27
CWR60_RS02925 NONE
CWR60_RS02930  606305 ..  606347 +  -8.3  -3.01712   AGCCGCGCCGCCTGA GAC-TGGCGCGGGCGGGCGCG GTG CGCGCCCTGCCGC-CTATGCC TGTTCGGGCACGAAG  55 26
CWR60_RS02975  614952 ..  614971 +    -8  -3.80461   TGGGGGGCACACAAA            TTGAATGA CTAG TCATTCAA             TTTCATGATAAATTC  66 86
CWR60_RS02980 NONE
CWR60_RS02985  616652 ..  616699 +  -5.3  -2.70932   GGCGCACGCAAGGCC TGCATGGCCGCCCGGCGCCAG GATATG CTGGGGCAGGGCCGCAGTCCG TCATTGGCAGAGGAA  45 40
CWR60_RS02990  618491 ..  618540 +  -8.4  -3.07816   GCGCCTGAACAGGGG GGGCGCCGCGGCGCCCCGCGCCCG CCGC CCGATGCG-GGC-CTGCGACGTCC TTCACTCAGTGAAAA  55 98
CWR60_RS02995 NONE
CWR60_RS03000 NONE
CWR60_RS03005  621223 ..  621237 +  -5.6  -2.73875   ATCGCCGAGCGCAAG               CTGGGG CTG CCCAAG               TCGTATTGAGCGGCG  45 2
CWR60_RS03010 NONE
CWR60_RS03015 NONE
CWR60_RS03020  624716 ..  624757 +  -5.8  -2.90763   CGCAAGCTGATGAGC ACGGCCG-GCGCGCC GAAAGGCTGAGGA GGCGCGCGTGGCCGA TCTCTGCGATATCGC  46 2
CWR60_RS03025 NONE
CWR60_RS03030 NONE
CWR60_RS03035  626710 ..  626724 +  -8.5  -3.55444   ACACCATCATGATGC               CGCGC CTGGC GCGCG               TTTCCAGGGTACGGA  62 52
CWR60_RS03040 NONE
CWR60_RS03045 NONE
CWR60_RS03050  629815 ..  629833 +  -5.2  -3.34894   TGCAGACAGGATCAA             TGCTGCTC ACG GGGCAGAA             TCTTTCGAAGCAGTT  51 51
CWR60_RS03060  631707 ..  631723 +  -2.2  -3.65199   CACCAGCGCGGTCTT              GCCG AAATCGCCG CGGC              TTTCCATGCCCAGTT  50 475
CWR60_RS03075 NONE
CWR60_RS03080 NONE
CWR60_RS03085  638568 ..  638609 + -12.2  -2.57132   CAGGTCCAGCCCGTC CTGGATGCCCAGCGCGAC CGATAC GTCGAGCTGGTCGGCCAG  ATTCTGCAGCAGGGG  62 490
CWR60_RS03110 NONE
CWR60_RS03115  646592 ..  646602 +  -3.2  -4.20531   TTTTCCGGACAAGCG                 TCAG CAC CTGG                 TTTTCCATCAATATG  63 89
CWR60_RS03120 NONE
CWR60_RS03125 NONE
CWR60_RS03130 NONE
CWR60_RS03135  652061 ..  652095 +   -15  -3.57144   GGTCCGCTTCAGCCC    GCCGCCGGC-CAGCG GCGCCG CGCTGAGCCGGCCGC     TTTCCACGTCGGGCG  83 193
CWR60_RS03145  654308 ..  654324 +  -3.6  -2.78816   GGAAAAGGGCGCGGC              CAGCGA GGTGA TCGCGG              TGTCGTGCGGGGTGG  41 208
CWR60_RS03155  655824 ..  655847 + -17.4  -5.75342   CGACGGTCGCAATCG          CCGGTCGCGC GCAT GCGCGGCCGG           TTTTTTTTGAGCGAG 100 45
CWR60_RS03160  656877 ..  656911 +  -5.7   -3.1505   GTTCTGACCAGCTTG    CGCAGCCAGATATGGC TGGC GTCATG-CTGGTAGCG     TTCATGCCAGATCAT  50 186
CWR60_RS03170  659530 ..  659547 +  -3.4  -3.53012   GCGACAAGTCTGCCC             CATCGG AGACAA CTGATG              TTTACACGCCGCCAC  49 236
CWR60_RS03175  660530 ..  660555 +  -2.4  -3.72576   GACGCCGGCGGCGCG         TCCGGTGCGC CCGATC GCGAGACGGA          TTTCATAAAAAAGGA  51 39
CWR60_RS03180  661566 ..  661600 +  -9.8  -2.52464   GGCATCCAGGTGCAA     TAGGCGGTGCGGCGCG TGG CGCGCCGCGCTTGCAA     TGGCTTGCGGCCGGC  56 23
CWR60_RS03185  662367 ..  662422 +  -6.4  -3.14564   GCCGCGGGCCGTGCC GGGCGCCGGCCCGGCGTCATGGCGCG GGTT CGCACAGCGCCATCAGGTCGGCGGCC TTCATCGCCGGATCC  51 62
CWR60_RS03200  665659 ..  665678 + -16.4  -5.75342   GGCCGAGCGTGCACG            CCGCCCCG CAAC CGGGGCGG             TTTTTTTTCGCGCGG 100 57
CWR60_RS03210 NONE
CWR60_RS03215  668378 ..  668403 +  -5.9  -3.61652   GACGGAAAGGCGATG         CCGGCGTCCGG CTGG CCCGCCGCCGA          TTGATTGTTTACGCA  56 53
CWR60_RS03220 NONE
CWR60_RS03225 NONE
CWR60_RS03230 NONE
CWR60_RS03235  672889 ..  672947 +  -7.4  -3.21099   TGAGCTGCACGGCCA CG-GGCAGGCC-GTCGGCCGTCCAGTG CAGCGGAA CACTGG-CGGCCGGCTGGCCGGAGGCG TTGATGATGGCGAGG  53 212
CWR60_RS03285  682558 ..  682583 + -13.2  -4.14243   GCAGATCGCCAACCA         GCGGCGCGGC GGCTGA GCCGCGCGGC          TTTTCGGGTAACCTG  85 10
CWR60_RS03290  683288 ..  683299 +  -7.2  -3.28791   GAGCGCCTGCGCGCG                CGGC TGGG GCCG                 TTCTGAGGCCGGCGT  54 8
CWR60_RS03295 NONE
CWR60_RS03300  685383 ..  685397 +    -7  -3.28791   ACCCGACGGATGACC               GCCAGC GCG GCAGGC               TTGTCGACAACGAAT  55 212
CWR60_RS03325 NONE
CWR60_RS03330 NONE
CWR60_RS03335  692308 ..  692330 +  -8.3  -2.62184   AGGCGGCAGTAGCAT           GGCCCGGCG CAAGA TGCCGGGCA           TCGTATAACAACGAC  52 29
CWR60_RS03340  693347 ..  693393 + -19.3  -3.53343   CGGCGCGCGCATCGA CTAGCCGGCGGCCGGGCTGCCC CTGC GGGCGGCCCGG-CGCCCGCATG TTTCAACGCCGGCTT 100 22
CWR60_RS03370 NONE
CWR60_RS03375 NONE
CWR60_RS03380  702316 ..  702343 +  -4.6  -4.66318   AAAGCCGACTTTCTG        AGCGCGGCGGCG GTGT CGGTGGCGCGCG         TTTTGTTGCGCTCCT  75 25
        gstA NONE
CWR60_RS03410  707963 ..  708002 + -14.3  -2.65298   GCGGCCCATGGACGT GCGCTCAGCCGCCCAGGCC GTCG GGCC-GGGTGGC-GAGCAC  CTTCTGGTAGATACC  69 67
CWR60_RS03425 NONE
        metC NONE
CWR60_RS03435  713091 ..  713113 +  -2.5  -4.56597   TGACCGCCGCGCGCT           GAGCGCCGC CTCTT GCGGCCTGC           TTTTTCCAGCCGCCC  67 24
CWR60_RS03440  714349 ..  714361 +  -3.3  -3.05935   GGTTTGCTGGCAAAG                CAGTG ATG CACGG                TTACCTGGAGGATAT  42 20
CWR60_RS03445 NONE
CWR60_RS03450 NONE
CWR60_RS03455 NONE
CWR60_RS03460  717830 ..  717844 +  -2.1  -3.23393   ATTGACGGGCCAAAG               TGGGA GACGA TTCCA               TCTTGTAGAATCCGC  44 36
CWR60_RS03465  718664 ..  718692 + -15.3  -3.04144   GTAGGGCATGCCATC        CGGTGCCTGTCCC CGC GGGACAGATACCG        TCTTGGCCATCAAGC  77 37
        dapA NONE
CWR60_RS03475  721152 ..  721177 +  -5.3  -4.30576   TGACCGGCCTTCTGG         ACGCGGC-GGCG CAT TGCTAGCCGCGC         TTTTCATCGTGCAGC  72 6
CWR60_RS03480 NONE
CWR60_RS03485 NONE
CWR60_RS03490 NONE
CWR60_RS03495 NONE
CWR60_RS03500 NONE
CWR60_RS03505  726883 ..  726898 +  -8.2  -3.05384   CGCCGCGCGGCTCAG              GCCGCT AGGC GGCGGC               TTCGATCCAGCGCGC  55 18
CWR60_RS03540 NONE
CWR60_RS03545  734287 ..  734299 +  -4.7  -4.07568   ATGTTCTCTTCCATC                AGCCG CGG CGGCA                TTTTCGAGGCAAAGC  63 161
CWR60_RS03555 NONE
CWR60_RS03560 NONE
CWR60_RS03565 NONE
CWR60_RS03570  738938 ..  738953 +  -7.5  -3.06183   TGCGCTTGCCGGCGA              CCCGC GCGCTG GCGGG               TTCGCTCGGCGTGGC  53 234
CWR60_RS03590 NONE
CWR60_RS03595  745873 ..  745894 + -18.7  -3.16564   AGGCCTGAGCGGGAA           GGCGGCGCC GGCC GGCGCCGCC            TTCCTGGCGTGGCGC  90 33
CWR60_RS03600  746931 ..  746944 +  -6.7  -3.31144   CTTCGCGCAGCACCG               GGATG TGGG CATCC                TTGTAGCGATGCACC  52 72
        tssI NONE
CWR60_RS03615 NONE
CWR60_RS03620  753483 ..  753507 +  -2.1  -5.00616   GCAGGCCAGCCTGGC         CGGCG-C-GGC ATTGC GCCAGACGCTG         TTTTTTCGCGCCGAC  79 455
CWR60_RS03630  755077 ..  755100 +    -3  -3.01712   CGCCGCGGCACAAGG          CCGTG-GCGCG CCA CGCCCTCAAGG          TATTCGGCGGCACGC  42 64
CWR60_RS03635  755673 ..  755712 + -17.2  -3.06696   TCCCGGCCTGCGCCC  GGGTGCCTCGCCTGGGTGC CTG GCACCCATGC-AGGCACCG  TCTCTTCCACGCCAA  82 59
        tssA  757454 ..  757475 +  -5.8  -2.56596   GGCCGCCAGCCAGTC           CTAGGACC GGTTCA GGCCCTAG            TCCCTTCATCAGGAG  44 22
        tssB NONE
        tssC  759601 ..  759626 +  -3.1  -3.01712   GACGGGCATCCATCC         G-CGCCGGCTCG CGC CGGCCCCGCGAC         TATTGAGGGAGAAAG  42 39
CWR60_RS03655 NONE
CWR60_RS03660 NONE
        tssE NONE
        tssF NONE
CWR60_RS03675 NONE
        tssG NONE
CWR60_RS03685 NONE
CWR60_RS03690 NONE
        tssH NONE
        tssJ  770832 ..  770853 + -13.7    -3.186   TGGTGGCCCTTCTGA           CGCC-GCGCC GCG GGCGCCGGCG           TGTCTTCATCTCTTG  73 26
        tssK NONE
CWR60_RS03720 NONE
        tssM NONE
        tagF  777821 ..  777840 +    -7  -2.78384   CCTGCGCCTGTTCGC            GGCGCCGC CGGC GTGGCGCG             TGTAATGCAAGGCCG  48 1
CWR60_RS03735  779111 ..  779132 + -18.7  -2.79796   GGCCTTCTTCAATCC           CGCGCCGGG ACGA CCCGGCGCG            TGTACTGGCCTGAGG  87 64
CWR60_RS03745  782409 ..  782426 +  -2.5  -2.86164   CGGCCACTCCTCGGT             CCGAGCG CGAG CGCCCCG              TGTAGTAATTGCCCA  40 512
CWR60_RS03780  791424 ..  791466 + -10.5  -3.18681   CCAGTTCGGCCTGGA CCTGCG-CGCGGGTGGC-GGC GCT GCCGGCCAGCTGGGGCGCGGG TTCCTGCGATTCGCC  60 363
CWR60_RS03815 NONE
        rocF  797552 ..  797593 +  -9.4  -2.88783   CAAATCCACCCTGAT GC-GCCGGCGCCC-CG-GCAG CGC CTGAACGTGCGCGCCGGCCGC TAGTTGTGATGTCTC  56 1
CWR60_RS03825  798827 ..  798844 +  -6.3  -3.05844   ACAGGTCGTCGGCGA             TCAG-CGC CTC GCGGCTGA             TCTTGCGCTCGGGCG  48 219
CWR60_RS03835  800325 ..  800353 + -10.1  -3.15861   GGCCCTAAAATCGCT        CCCGTGGCGCGGC CCG GCTGGGCCGCCGG        TTCCTAGGAGTCCTG  62 71
CWR60_RS03840  801195 ..  801219 +  -3.5  -4.93547   GCCGTAGCGCCTTGG          CGGGGCG GTTTACTATTA CGCCCTG          TTTTTCCTTCGTTCG  79 34
CWR60_RS03845  802076 ..  802121 +  -8.1  -3.36273   GGGTTCGGCCTTCTC GT-CGGCGTGGCTGGCGGCCAG CAC CATGCCCTCGGACACGCCGAAC TTCATCTTGCGCGGC  55 135
        apbC NONE
CWR60_RS03865 NONE
CWR60_RS03870  811352 ..  811364 +  -7.7  -3.37344   GCGGCGGCCGGCGGC                GGGTA GAA TACCC                TTCATTCAATCGAGG  59 49
CWR60_RS03875  812143 ..  812164 +  -6.5  -3.25823   GCTTTGCGTCTCCAC           GCCG-CCGAC CTC GTCGGGCTGC           TTCATGTAACGGGAA  52 216
CWR60_RS03900  816360 ..  816399 + -39.4  -3.65812   GCAGTAAATCCGACG  CGCCGCGCCGGGCCGCCC GAGG GGGCGGCCCGGCGCGGCG   TTGTCTTCGAGGGAG 100 34
CWR60_RS03905  817645 ..  817670 +  -4.7  -3.72481   TAGCCTGGCGGGCAC        GGCGCATGCGG GCAGGG CCGC--GCGCC         TATTGTTTTGGTAAA  55 38
CWR60_RS03910  818531 ..  818561 + -14.6  -2.52623   CGGCATGGTGGCCGC       CGGCGCCACCGCGC TGG GCGCGGTGCCGGTG       CTCTTCTCCCAGACC  71 186
        gcvT  820761 ..  820805 +  -3.4  -3.97368   GTCGAACACTCGTAA ACTCGAG-GCTTCCGCGCGGCC GCT GGCCGC-CGGAGGCGCGCAAAC TTTCTCCATTCCCAC  58 26
        gcvH  821239 ..  821259 +  -8.1  -3.90744   CACCGGGCCGGCCCG            CGGGCCGGC CCC GCCTCCCCG            TTATTTCGAGAAAAC  68 48
        gcvP  824478 ..  824519 +  -5.8  -3.75665   CATTGCCGTACGCCA TC-CG-GGGTGCCTGTCCCC GCAT GGGGACTGGCACCGGCAAGA TTTCATGGCATCTGC  57 363
CWR60_RS03940 NONE
CWR60_RS03945 NONE
CWR60_RS03950  828923 ..  828963 + -15.9  -2.70932   CCCTCGGTGGCCCAG  GCGGCGGCGTCGGCGGCCT CCT GGGCGGCCTCGGCCGCCGC  TGCTTCGGCGGCCGC  74 500
CWR60_RS04020  846882 ..  846905 + -16.8  -5.75342   CCTTTGGTGGATTTA          GCCCGAGATC GCAA GATCTCGGGC           TTTTTTTTCGCCGCG 100 465
CWR60_RS04025  848350 ..  848360 +  -6.8   -3.1506   CATACAATTCCGTAG                 CCGT CAC ACGG                 TTGATAGGGAGATTT  52 102
        tviB NONE
        tviC  850674 ..  850686 +  -4.8  -3.51232   CCATGCCCTGGTACA                CGCA ATTCC TGCG                TTGATTTGAAAGCCA  52 9
CWR60_RS04040 NONE
CWR60_RS04045 NONE
        asnB NONE
CWR60_RS04055 NONE
CWR60_RS04060 NONE
CWR60_RS04065  858904 ..  858919 +  -6.8  -3.14463   CGGACTCGACCAGCC              GCGCTT CCTT GAGCGC               TTCGTCGAACGGCTT  50 350
CWR60_RS04080 NONE
CWR60_RS04085 NONE
CWR60_RS04090  864650 ..  864675 +  -3.1  -3.54543   GGCTGGCGCTGCCGG         CGGGTGGCGCA TGAG TGCACGGCCTG          TTTCCGGCAATGGAT  49 12
CWR60_RS04095  866044 ..  866070 +  -3.7  -5.40072   ATTTGACATCGATTT         GACGCCCAA CAGGTATAC TTGCGCGTC         TTTTTTTGCAACGAA  90 87
CWR60_RS04100  868040 ..  868067 + -21.4  -3.14132   CCCGCAAGGAAAAAA        GGTGCCTGTCCC GGTT GGGACAGGCACC         TTCGTCACCCGCGGG 100 42
CWR60_RS04115  872786 ..  872813 +   -12  -2.55213   CGCCTGATGGACCAG        TGCGCGCGCCATG CGC CG-GGCGTGCGCA        TCGATTCGCTGCGTC  61 519
CWR60_RS04145 NONE
        lolB  879715 ..  879731 +  -6.5  -2.52896   CGGCGGTCTAGAATA              GGGGC ATCCCCA GCCCC              TCGCTTCCGCCGTGA  45 46
CWR60_RS04155 NONE
CWR60_RS04160  880738 ..  880780 +  -4.2  -5.79595   CCAATACATAAAAAA GCTGTTGAAC-G-CGCCCGT CAGAC ACTGGCTCCAGTTCAGCAGC TTTTTTGTTTTACGA 100 43
CWR60_RS04165  881857 ..  881881 + -12.8  -3.01924   GCGGCGCGCAAAAAC          CACGCAGCGC ATGTC GCGCCGCGTG          TCTTAACCGGCGATC  67 81
CWR60_RS04170  882592 ..  882630 + -24.8  -2.91695   CGTGTCCGACGTCCC   CGAAACCCTGCGCATGCG ATT TGCATGCGCAGGGTTTTG   TACTTTACAAATACG 100 79
CWR60_RS04175 NONE
CWR60_RS04180 NONE
        ychF  885621 ..  885660 + -12.8  -3.57263   CTGAAGGTGGTTTCC  GTGTTGGCGCTGCC-CGTT GTC AGCGCGGCGGCGCCGCCGC  TTTCGCGGTAGCCAT  74 440
CWR60_RS04200  891693 ..  891720 + -10.5  -3.08679   GCCAAGCGCGGCGCC        GGCG-GCGCGCC GGCCG GGAGCGCTCGCC        TATTGCCTGGCCCCG  62 49
CWR60_RS04220  896487 ..  896508 + -11.5  -4.15044   ACGGCGCGGTAGGAG           GCGCCCAGC AGCA GCTTGGCGC            TTTCTTCGGCAGCGG  82 109
CWR60_RS04250  904762 ..  904810 + -13.8  -3.35679   CGCCGCAGGTCGTTG CGGCCCGGCGTGCCCGGTCCGC GCCGACA GCGG-CCGGGC-CGATGGCCCG TTCTCACTGGAAGGG  77 208
CWR60_RS04255 NONE
CWR60_RS04260 NONE
CWR60_RS04265  908453 ..  908502 +  -9.7  -5.07011   ACCGCATCGGCGGCG CGTATTAGGGCTGGCGGGCGTCC GTCG GGACGCCGCCCGGCCCGGGATCG TTTTTCCTTTATCTG  95 18
CWR60_RS04285  913623 ..  913676 + -19.7  -3.09968   GCCGCTGGATAATGT CGGGCGGCC-CACGAAAAAGCCCTCC AGC GGAGGGCTTTTTTCTGAGGCGGCCGG TATTCAGCTTGCCTG 100 29
CWR60_RS04300 NONE
CWR60_RS04305 NONE
        ftsY  921822 ..  921847 + -20.5  -2.90496   GTTCGCGCCTGCCCG         CAACGCCGCCC GTCC GGGCGGCGTTG          TCATTTCCAGAACGG 100 46
        ribB NONE
CWR60_RS04375 NONE
        nusB  931289 ..  931321 + -11.1  -3.72695   GCGGCGCTGACCTTC      CGCGGGCGCGCCCGC GCG GCGCGTCCGTTCGCG      TTTGCTGGCAGGAGT  73 31
        thiL NONE
CWR60_RS04390 NONE
CWR60_RS04395  933911 ..  933923 +  -9.1  -4.08767   TGCAGGTACAGCGGC                TGGCC GTC GGCCA                TTTTCAGGAACTGCA  72 495
CWR60_RS04465  951155 ..  951165 +  -5.4  -2.76315   TCCGCTTGACAGCAC                 GAGA TGG TCTC                 ATTTAAAACTATTCA  45 32
CWR60_RS04470  952230 ..  952269 + -16.4  -3.14211   GCCGCAGTAGCGGCG  GGGCGGCGGCGGATC-CGC AGG GCGCGGTCCGCTACTGCCC  TTCGTGCACGGCGAT  81 31
CWR60_RS04495 NONE
CWR60_RS04500  957761 ..  957780 +  -2.8  -3.36273   CCGAAAGCGTCCTGA            GCGGACGGC CGG GTC-TTCGC            TTGCTATTCAACGGA  48 26
         ggt NONE
CWR60_RS04510  960103 ..  960141 + -11.7  -3.68351   AGGTTTCGAGCTGCA  CCTCTCTGGACCCATGCG CGCG CGCATGGG-CCAGGGCCG   TTTCCATCATGGCGC  74 183
CWR60_RS04535  965718 ..  965728 +  -3.2  -3.13403   TTGCTGCCGGCCGCG                 CGTC GAT GATG                 TCTTGCTCGCCGGCC  44 17
CWR60_RS04540  967053 ..  967069 +  -7.9  -3.61398   GCGAGACCATGCCCA              CGCCGAC GCT GTCGGGG              TTCTTCCGGACCCAC  60 524
CWR60_RS04565  971972 ..  972029 +    -9  -3.05384   CGCCCAGCGATTTGG CGCGGT-ACATGGCGC-GGTCGGCGGCC ATGA GGCTGGCGGCCAGCGTCGCGTCGCCGGG TTCGATGCGCGCCAG  55 72
CWR60_RS04640  988456 ..  988471 +    -9  -2.79183   ATGCGCCGCGCCAGG              TCGAGC GCGC GCTCGA               TATGCTGGCCGTAGG  52 224
CWR60_RS04665  994886 ..  994898 +  -6.2  -3.32844   CTTGTTGCTGTGCAC                CGCC TTGCC GGCG                TTCTAGCATGAGGCC  53 7
CWR60_RS04670  995587 ..  995620 +  -8.8  -3.02144   CGAATAGCGCCGCAG    GCGCGGCGCGCCTAGC GCGA GC-GGGCGCGC-GCGG     TCTTGCGCGGCGTGG  55 34
CWR60_RS04695 1001164 .. 1001191 + -10.6  -4.07568   GGTTGCTGAAGGAGC        GGCGGTCCGCA CGTTGGC TGCGG-CCGCC        TTTTCCAGGAGCAAG  81 169
CWR60_RS04700 1001993 .. 1002021 + -10.1  -3.85092   CCGGCGATGCGGGCG        GGCTTGCGCGCCG GCG CGGCGCGATGGTC        TTTGCTGTCGCTCAT  73 303
CWR60_RS04715 1004107 .. 1004128 +  -5.9  -2.91264   GCAGGCGTGCTTGGA           TCATGACAT AATG ACGTCATGA            TGTCTGAATCGAACC  48 66
CWR60_RS04720 NONE
CWR60_RS04725 NONE
CWR60_RS04730 1006066 .. 1006086 +  -8.9  -2.62616   GGAAGTCGGCCAGGC            CCTTGGCGC CTT GCGCCAGGC            TGATGTGGCGCATCA  51 76
CWR60_RS04740 NONE
CWR60_RS04745 NONE
CWR60_RS04750 NONE
CWR60_RS04755 1011427 .. 1011444 +  -2.6  -2.66869   GCATGTGGCGCGCCG             GCGCCA AGGAGA TGGCGG              TGAGTTCTTCCATAT  38 41
CWR60_RS04760 NONE
CWR60_RS04765 NONE
CWR60_RS04770 NONE
CWR60_RS04775 1014778 .. 1014819 + -18.1  -3.53012   CGGCGCGCCGCGTCC GCGCG-GCGCCGCC-GCTT CAGGAC AGGCCGGCGGCGCGCGCGC TTTCGGCCGACAAGC  90 43
CWR60_RS04785 NONE
CWR60_RS04790 NONE
CWR60_RS04795 NONE
CWR60_RS04800 NONE
CWR60_RS04805 NONE
CWR60_RS04810 NONE
CWR60_RS04815 1022192 .. 1022207 +  -3.2  -3.06796   TATCTTGGGGAAAGG              GGGC-GC GAT GCTGTCC              TTGCATAACGTAGAC  42 2
CWR60_RS04820 NONE
CWR60_RS04825 1024271 .. 1024295 +  -8.6  -2.66435   CGGATATGCCAGGGC         CG-GC-CGCTGG CTT CCAGCGTGCGCG         TCATCTCCTGGCGGT  51 298
CWR60_RS04835 1025627 .. 1025641 +  -3.5  -2.72344   GTCCAACTGCTGGAG              GC-CGC CCAT GCGCGC               TAATTCGAACTCGAA  41 8
CWR60_RS04840 1026123 .. 1026152 +  -4.1  -2.71712   TACCGCGAGTGGCAG       GACGGGCCG-CAAG CGC CATGACGGCCCCGC       GTTTGGGCGCCGCGC  41 5
CWR60_RS04845 1027371 .. 1027417 +  -3.6  -3.90112   GCGCGCCCAGTGCCT G-AAGGCGCCGCGGTCGCCCTG GTCCA CGGTCCGGCCG-GGCGGCTTGC TTTACTTCAGCGCCG  59 24
CWR60_RS04855 1029467 .. 1029503 + -20.2  -4.26076   CCCGCCGCTCATCCC   GGCGCGGACGGCTTCCT TCAC GGGAGGCCG-CCGCGCC    TTTTCATGGCGGTGC 100 70
CWR60_RS04860 1030359 .. 1030392 +  -8.7  -3.18681   GGCGGGCGTAGTGCT     CGGC-GTTGCCGGCCT GCT GGGCCGGCGTCAGCAG     TTCGTCGGGTTCGCG  56 400
CWR60_RS04875 1033495 .. 1033537 + -12.6  -3.16564   CGCCAGGCTGATCAG CGCGGCGAACATGGTGCTGG TGT CCAGCGTGGTCGTCGCCGCG TTGATCAGGTAGCCC  68 140
CWR60_RS04910 NONE
CWR60_RS04915 NONE
CWR60_RS04920 1042524 .. 1042545 + -12.9  -3.81146   CGTATCGGTATCCGC           GGGCGCGGG CGTG CCCGCGCCG            TTATTCATTGCAGGA  83 52
CWR60_RS04930 1044585 .. 1044624 +   -30  -3.68351   GGCAAGTAAGCGGCG  CCGCGTCCCGGCCCGGCG TGCG CGCCGGCCCGGGGCGCGG   TTTCACTCCTGCGCC 100 32
CWR60_RS04980 NONE
CWR60_RS04985 1064062 .. 1064100 +  -8.7  -4.36914   CCAGCACGTAGTCCA  CCTGGCCGCCGGC-CAGG TCGG TCAGCGCCGGCGGCTGGC   TTTTGTACGGCACGC  78 443
CWR60_RS05015 NONE
CWR60_RS05020 NONE
CWR60_RS05025 1070792 .. 1070807 +  -7.6  -3.28712   ACGGGCCTTCAGCCA              CGAATC GAGT GATTCG               TTGTAAACCGGAAAA  55 275
CWR60_RS05040 NONE
CWR60_RS05045 1075096 .. 1075121 + -13.9  -3.65046   TGCCCAGGCCGGCGG         CGGCGCCGGCG GTGA CGGCGGTGCCG          TTGTTGAAGTAGACG  78 450
CWR60_RS05055 NONE
CWR60_RS05060 1076921 .. 1076959 +  -5.2  -2.78384   CAGCCGCCGCCACGA   TTGGCCGCCGTCGG CGGTCCAGAAT TCGCCGGTGGCCGA   TATGCTGGCCGGCGC  43 150
CWR60_RS05070 1078893 .. 1078913 +  -2.5  -3.01712   GCGGCGGAAAACAAC            AGAATTGGT TCG ACCAATCCA            TCTTCGGAGGAAAGA  41 163
CWR60_RS05075 NONE
CWR60_RS05080 NONE
CWR60_RS05085 1083013 .. 1083023 +  -8.2  -3.59979   CATTGGCGACTGAGC                 GCCG CAC CGGC                 TTTCGGATCAAACAA  62 28
CWR60_RS05090 NONE
CWR60_RS05095 1085205 .. 1085227 +  -6.8  -3.29144   CCCAGGGTTCGTCCA           GCGGCGCCAC CGC GATGCGCTGC           TTGTCCAGCGCCTCG  52 171
CWR60_RS05105 1088130 .. 1088156 +  -9.4  -3.13867   TGGCGCTGCCGGTGC         TGCCCGCCTG GGTCTGG CAGGCGGCCA         TGTCTTGCTGGGTGG  59 401
CWR60_RS05115 1088739 .. 1088760 +  -4.3  -4.19678   GGTCCCTGCGACCTG           C-GCGCGGCG CCA TGCCGCTCCG           TTTGTTAGCATCTGC  66 51
CWR60_RS05120 1089909 .. 1089932 +    -3  -3.85817   GTCGAATTGCGCGAG          GTGGGCG-GCC ATG GTCTCGCCCAG          TTTCTGGCGGCCGAT  56 364
CWR60_RS05190 NONE
        cydB NONE
CWR60_RS05200 NONE
CWR60_RS05205 NONE
CWR60_RS05210 NONE
CWR60_RS05230 1111180 .. 1111196 + -10.1  -2.72379   GGGTGATGCATTCGG              CCTGCTC CTC GGGCAGG              TCGTTGAGAAATTCG  56 404
CWR60_RS05255 1116743 .. 1116780 + -11.1  -2.64803   TGCTGGCCGCGCGGC   GCGCGCCGTCGGCGCGCG TCA CG-GCATCGTCGGCGCGG   TAGGTTTCGCGGTAG  59 395
CWR60_RS05265 1118220 .. 1118253 + -18.1  -3.37796   ATCGGCGCCGCTGCT     GGGCGCGCTCATGGC CAGC GCCTTGACCGCGCCC      TTGTCGATCATGGGC  87 333
CWR60_RS05285 1121286 .. 1121319 +  -8.8  -3.12847   AGGCGATGGGATAGT    C-GGGCGTGGGCGGGC AGTC GGCCGCC-GCGCCCAG     TTCGGTGTAGCGGTT  56 224
CWR60_RS05315 NONE
        ppk2 1128600 .. 1128619 +  -2.7  -3.26471   TGAGTTGTTCGAGCA            GGTCTGC CGCGAA GCCGGCC             TTGATCTCCAGCTCG  45 188
CWR60_RS05330 1129342 .. 1129370 + -13.2  -4.62984   AGCCTACGAATTCCC        AGAAAACCCGCC CTCGA GGCGGGTTTTCC        TTTTCTGTCTCCTGG 100 138
        ilvA 1131087 .. 1131119 +  -6.2  -4.20797   CAGGGGTCAGGATTT     CCCCCTTCGGGGATG GGCA CG-CCGGGAAGGGGG      TTTGTCTCCTTTTCA  70 122
CWR60_RS05340 1131665 .. 1131716 + -14.6  -2.62184   CCGGCACCAGGCGTC GAAGC-GG---CGCGCGCCTTGCGCG GTGA CGCGCAAGGCGCGCGAATCCAGCTGC TGCTCTACCCAACCA  69 93
CWR60_RS05350 NONE
CWR60_RS05355 NONE
CWR60_RS05360 1135400 .. 1135410 +  -2.4  -3.53012   CGGCACCAGGGCCAT                 GCCG ATG CCGC                 TTTCGGCCAGCGCGA  47 233
CWR60_RS05370 1137476 .. 1137510 +  -6.3  -3.65522   ATGCGCCGGCAATGG    CGCCGGCC-AC-CGCCG GAC CGACGAGCAGGCCGGTG    TTGTTGCCCTGCATG  57 138
CWR60_RS05380 1139589 .. 1139609 + -12.5  -3.05498   GCGCGGCTGACGCCG            CAGCGGCCG CGC CGGCCGGTG            TATATATATCGCATG  67 31
CWR60_RS05385 1140356 .. 1140368 + -10.5  -3.19081   CCCTCTACCGGAACC                GGGCC GCC GGCCC                TATCTTGCTTACATG  62 76
CWR60_RS05395 1142518 .. 1142548 +  -7.4  -2.66969   GCCGCCCGGGAAACC       GCTGCCGCGGATCG CTG CGATCCGCGCTCCC       TCCGTTGTCTTGATA  50 175
CWR60_RS05400 NONE
CWR60_RS05405 1144380 .. 1144394 +  -3.4  -3.63097   GACTGCTCCCCGTCC               CGGCAG GGC CAGCTG               TATTGTTTGTGCACT  53 80
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD 1148443 .. 1148476 + -28.3  -3.89346   CCGGCCTTGGTTCGC     CGACAACCCCCCGGG CTTG CCCGGGGGGTTGTCG      TTTGTGGGGTGGCCC 100 75
CWR60_RS05460 1153635 .. 1153661 +  -5.7  -4.11484   GCAGCCGCGCGCCCC        GCCCGCCGCCGC CTGA GCG-CGGCAGCC         TTTTCGCGGCTTGCG  64 10
CWR60_RS05465 NONE
CWR60_RS05470 NONE
CWR60_RS05485 1160273 .. 1160323 +  -2.3  -2.62184   CCAGGCCGGCCATGA CGTGCCAGCCGACGGGCGGACGCGC CAG GC-CGGC-GCCCATCGCCTGGGCCA TCATGTAGGCGCCGG  38 227
CWR60_RS05495 NONE
CWR60_RS05500 NONE
CWR60_RS05505 NONE
CWR60_RS05510 NONE
CWR60_RS05550 1171140 .. 1171154 +  -3.4  -3.53761   ATCGCCGGTAGAATC               CTGCGC ATG GGGCGG               TTTGCGCCCCGGTTC  49 91
CWR60_RS05555 1172014 .. 1172072 +  -7.1  -3.14211   GCCACGCCCGAGATC AGCCCGCCGC-CGCCGACGGGCACGATG ACCG CATCGAGCTCGCCGGCCTGCTGCAGCCA TTCGTGGCCCAGCGT  53 456
CWR60_RS05575 NONE
CWR60_RS05580 1175743 .. 1175756 +  -3.7  -3.28712   CACGTCCGCCCAGGC               CCAGC CGCT GCAGG                TTGTCGGCGGCGCAG  47 446
CWR60_RS05615 1183961 .. 1183971 +  -8.2  -2.80622   CCGCGATTTCCGGCC                 GCGC GCC GCGC                 TATGATCGACTATCT  52 10
        moaA 1185126 .. 1185183 +  -3.4  -3.57263   GGCACCTGCGGCGTG CCTCGGAGCCTGTCCCTGCGGGGACT GGCTCCGA AGGGCTTGC-GGGACAGGCATC-AGG TTTGCAGGTGCCAGT  49 67
CWR60_RS05650 NONE
CWR60_RS05655 1192680 .. 1192705 +  -6.7  -4.11623   TGGTCTTCGGGCAGC         CCGTCGGTCGC CTCG GCGATCGCCTG          TTTCATTTCGTCGTA  69 63
CWR60_RS05665 1193813 .. 1193828 +  -4.6  -3.14404   CGCCGCCACCATGCT              GGCCCA GGCC TGAGCC               TTACGTAGTTGCTGT  47 13
CWR60_RS05670 1195373 .. 1195408 +   -19  -3.09492   ACAGGCACAAAAGAT    AGCGGGAGCCTGTCCC CGTT GGGACAGGCTCCCGAG     TATTGGAGTTACCAC  90 95
CWR60_RS05685 1198055 .. 1198067 +  -4.7  -2.84801   CGAGCTCGACTACCC                GCCCG TCG CCGGC                TGATATTTCAGCCTG  44 10
CWR60_RS05690 1198460 .. 1198482 + -12.7  -3.05715   GCCGGCCCGCGGGAG          CCCGC-GCCC CCCT GGGCGGCGGG           TTCGCTGCGCCGCTT  67 46
CWR60_RS05695 1199594 .. 1199615 + -14.5  -4.16146   CCGGGAAGGAAAAAA           GCCAGTTGC GTGA GCAACTGGC            TTTTCGGAATCTTTT  89 466
        acnA NONE
CWR60_RS05725 NONE
CWR60_RS05730 NONE
CWR60_RS05735 1207049 .. 1207064 +  -2.4  -2.84013   GATTTCTGCCTTGAG              CGCTGG ATTT TCTGCG               ATTTCAGTGTCATTC  40 90
CWR60_RS05740 NONE
CWR60_RS05745 NONE
CWR60_RS05750 1210914 .. 1210959 + -18.9  -3.85817   CGCTGGCCGAGCTGA ATTGAGCACGCCGCCCGCGTG GCCT CACGCGGGCGGCGTGTACCGG TTTCTCAACGCAACT 100 21
CWR60_RS05755 1211988 .. 1212009 + -18.7  -3.30124   GCTGAACTAAGGGCA           GGGCGCGCC GCGC GGCGCGCCC            TTCTCAGGCCTGGCG  93 31
CWR60_RS05785 1216120 .. 1216143 +  -6.6  -3.68351   TGATGCCGGTGTTGG          TGGCG-GCCAC CAT GGGGCGCGCCG          TTTCCATGGTGCGCA  59 208
CWR60_RS05815 1222483 .. 1222512 + -22.9  -5.40072   GCTGCATGTAAAAAA       CCCTGCCCGGCCG TATT TGGCCGGGCAGGG        TTTTTTTACGACCGG 100 135
        dacB NONE
CWR60_RS05850 1230528 .. 1230542 + -11.4  -6.06723   CCGCCCACAGGAAAA               CCGCCT TGC AGGCGG               TTTTTTTTTGCCGCC 100 59
CWR60_RS05855 1233768 .. 1233784 +  -7.9   -4.2679   AGCGAGAAGGGTCCA              TCCCCCC GCG GGGGAGA              TTTTCCTGGAGGTTG  74 41
CWR60_RS05865 1236248 .. 1236262 +    -7  -2.66316   CACGCGGGGGTACGT               GGCGCG GTG CGCGGC               TGGTATGATGAACGC  47 51
CWR60_RS05870 1236617 .. 1236669 +  -7.4  -3.66999   GCCTGCTGATCAGCC GCCGCTGATCACGGCGGGGCGGGC CGCGC GTCCGCCCCGGCATGCACAATGGG TTTGCGTAGATCGGT  63 18
CWR60_RS05875 NONE
CWR60_RS05880 1237448 .. 1237478 + -10.3  -3.16564   CGATTGAGCCAGGCC      GGCAGGCGGGCGGC CGGC GCCGCCCG-CGGCA       TTGCTACAGTCCCAG  62 34
CWR60_RS05890 1240337 .. 1240357 +  -3.1   -4.4017   CCAGCGTGGGCGCGC            AGATCGCCA GGC TGGCGGCCA            TTTTCTCGACCTTGG  68 422
CWR60_RS05910 NONE
CWR60_RS05915 NONE
CWR60_RS05920 1246503 .. 1246513 +  -8.2  -4.07568   CGATCCGCTGCCAGT                 GCGC CAG GCGC                 TTTTCGGCGCGCGCC  72 408
         tkt NONE
         gap 1250172 .. 1250214 + -21.4  -4.07568   CTGAACAGGGCGCAA GGGCCAGGTTGGTTTTCCCG TCA CGGGGAAACGGATCTGGCCC TTTTCGCAGGCAGGC 100 51
         pgk 1251659 .. 1251674 +    -6  -3.01712   TCGAAGCCGGTGATG              CCCGAG GCGG CGCGGG               TCTTGAGCGGCCCGG  48 227
CWR60_RS05985 NONE
CWR60_RS05990 NONE
CWR60_RS05995 NONE
CWR60_RS06000 1261961 .. 1261995 +  -6.3  -3.64487   GCTGCAGGTCGGCGC    GCTCGCGCG-CCGGCA GGCC TTCCAGCCGCGCGACC     TTCTTGGCCGTGTCG  57 456
CWR60_RS06010 1263861 .. 1263886 +  -3.9   -4.7416   CGCCGCCCGGCAATG         AGGCGTGCGCTA TAG TGG-GCGCGCCG         TTTTTCAGATTTTCA  77 25
CWR60_RS06015 NONE
CWR60_RS06020 1265329 .. 1265374 +  -9.8   -2.5806   AGGCGCAGGCCGTCC TCGCCGA--GGCCGAACGCGCGC CGG GCGC-TGTTCAGCCGGTCGGCGG CTTCTCGCAGGGTTT  55 247
CWR60_RS06065 1272086 .. 1272101 +  -6.8  -2.71011   GCGGGAACGGGACCG              GCGCCGC GTT GCG-CGC              TGATTGCGAAGGGAT  48 46
CWR60_RS06070 1273353 .. 1273372 +   -15  -5.15634   GCCCGCATGAAAAAA            CCGGACGC TCGC GCGTCCGG             TTTTTTCATGGCCTC 100 73
CWR60_RS06080 1274932 .. 1274958 + -17.3  -5.26875   GCCGGCGCCGTCCAG        GCCCGC-CGCCC TTCG GGGCGCGCGGGC         TTTTTTCATTGGAGG 100 46
CWR60_RS06085 NONE
CWR60_RS06090 NONE
CWR60_RS06100 1275583 .. 1275601 +  -4.4  -2.77523   CCGTGCCCTTGCCGC             TGGCGCTC TGA GTCCGCCA             TGATCTTCCTGCGCA  43 15
CWR60_RS06105 1276182 .. 1276199 +  -9.1  -3.41836   AAAATAGCCGATTCG             CGGC-CGC CTG GCGGGCCG             TCTTTCCATCCCTAT  63 127
        purE NONE
CWR60_RS06115 1277925 .. 1277939 +  -3.4  -2.60075   GCGCTGGGCATGGCC               GCGCCG TTC TGACGC               ATTGATTCCCGCCCC  39 14
CWR60_RS06120 1279019 .. 1279040 +  -3.5  -2.62184   GGCGTAACTCCTGAT           TGCCGCGCC TTCC GGCCGGGCG            TAATCTCACGCGGAC  40 51
CWR60_RS06125 1280164 .. 1280201 +  -8.3  -3.06162   CTAGGGCGAGGGCGG   CGGGGCGGGAAAGATCGC CAA GCGATACG-CCCGTCCCG   TATTGCGGTACGCTA  55 37
CWR60_RS06130 1281105 .. 1281123 +  -5.9  -3.62518   GTATTTGACGGGGGA             GCAAGGG GAATA CCCTAGC             TTTCCGGATCTTTCG  59 50
CWR60_RS06135 NONE
CWR60_RS06140 NONE
CWR60_RS06145 NONE
CWR60_RS06150 1284493 .. 1284516 + -19.6  -2.75712   TGGGTTGAGCCCGGC          CTGCCGCGCG CGCC CGCGCGGCAG           TGGTTCCATGGCTGG  93 33
CWR60_RS06160 1286940 .. 1286978 + -13.1  -3.73072   CGCGGGGTGGAAGTT  TGCCG-GTGCCAGTCCCC CTGC GGGGACAGGCACGCGGGG   TTTAGTAGAAGGCTT  79 216
CWR60_RS06175 NONE
        xerD NONE
        ybaK 1292418 .. 1292440 +  -9.1  -2.94144   TCGTCGCATGACCAG          GCCGGCGCGT TACG GCG-GCCGGC           TCCTTTCCATGGAGA  56 102
CWR60_RS06190 1293014 .. 1293028 +  -5.6  -3.57144   CGCAGTTCCTGGCGG               TGCTGG GCA CCCGCA               TTTCGCACTGACCCC  54 0
CWR60_RS06195 1293962 .. 1293980 +    -3  -4.07885   CGGATAGTTGCGGCC             CAGCGC GTGGGCG GCGCGG             TTTTCCGAGGACATC  58 485
CWR60_RS06210 1296720 .. 1296734 +  -9.2  -3.28712   AACTGGGAAAACATC               GCCGCG CTG TGCGGC               TTCTAGGCCGCGCGC  61 187
CWR60_RS06215 NONE
CWR60_RS06220 1303234 .. 1303292 + -27.7  -2.71731   TGATGGGTCCGGTCG -G-GCCGGGGCCCGCCAGCTACGCATTCT GTT AGAATGCGTAGCTGGCGGGCCCCTTCGCA TGGTTCGGCGGTGAA 100 420
         ffs 1303403 .. 1303438 + -10.7  -2.70932   AGGGGCGCCGTGACC   GGAATGTATCGCGATCC AGGC GGATCGC-AT-CATTCC    TGGTTGCGGCGCCCC  60 54
CWR60_RS06230 NONE
CWR60_RS06235 1306043 .. 1306076 + -20.3   -2.6927   GCTGCCGTTCTGATA     GCGC-CTTGGCGGCCC GCC GGGCCGCCGGGCGCGC     TGCTGTCTGCGCGAT  95 28
        recR NONE
CWR60_RS06245 NONE
CWR60_RS06250 NONE
CWR60_RS06255 NONE
CWR60_RS06260 1311179 .. 1311222 +  -6.6  -4.02817   ATTGCACGCCCGGAT CGTTGGCGCCGCG-GCG-CG CATCCT CGACCCACTCGGCGCCGGCG TTCTTCTTGTGCCAG  66 438
CWR60_RS06270 NONE
CWR60_RS06275 1316425 .. 1316454 + -16.5  -5.96521   CGCCTCGAACGTCCG       CCCCATCCACGGCG CCA TGCCG-GGATGGGG       TTTTTTTTGGTTCAT 100 46
CWR60_RS06285 1318252 .. 1318281 + -12.8  -2.87344   TGCGCGATGACTGAA       GCGCGCGCCGGGC TGTTT GCCCGCCG-GCGC       TATCTGCCGGCGCTG  66 27
CWR60_RS06305 NONE
CWR60_RS06310 1325341 .. 1325364 +    -8  -3.09015   CGCGCCTTTCGCGCC          GGGCCGTTGG CGCC CCGGCTGCCC           TTGAATCCCTATGCA  54 43
        greB 1326012 .. 1326045 + -14.5  -3.57971   GTTCGTGGCGTATGG     CGGGGTGCCTGTCCC GGCG GGGACAGGCTTCCAG      TTTGCCGGTGCCTGT  81 92
CWR60_RS06335 1333558 .. 1333579 + -14.5  -5.55769   TTCGCTCCATTCGAA           CGGCCTTTC GCGA GAAAGGCCG            TTTTTTATTGTCCGG 100 50
CWR60_RS06340 1341633 .. 1341651 +    -3  -3.36289   TGCGGCAAGGCGCCG             GCAGGCAT AAA ATGGCGGC             TTCGTTCCCGTACTG  48 72
CWR60_RS06345 NONE
CWR60_RS06350 1344039 .. 1344086 +  -3.9  -3.57144   CACGGCACACGTAGT GCTCGGCG-GGCCGCGC-GGGCC ATGC GGCCTGGCGTTGCCGCGCCACGA TTTCCGAATAGGCGG  51 328
CWR60_RS06370 1347946 .. 1347978 +  -2.5  -3.33671   TCCGGCCAGACAAAG      CGCCCAGGGCCCC ATCCACA GAGGCCCTGCATG      TTGTCGCGTGCATCT  44 51
CWR60_RS06375 NONE
CWR60_RS06380 1349634 .. 1349655 +  -4.3  -2.86413   CCTGGTCCAGCGCCT           GGGCGCG TTGCGCCC CGCACCC            TGATCTTTCCCGTTT  44 1
        dsbG NONE
CWR60_RS06390 1351075 .. 1351085 +  -2.4  -4.26681   TTGATAGGTGCCGTA                 GCGC GCA GCGG                 TTTTCAATGCTTTGT  62 262
CWR60_RS06405 1353561 .. 1353588 +  -9.1  -4.07687   CGCGCCGGGTCTTGC        GGTGCGCCGGCC ATTCC GGTCGGCG-GCC        TTTTCCACACAGCGT  75 173
CWR60_RS06410 1356207 .. 1356240 + -10.1  -3.57792   GCCTCGGCCTCGGGC     TCGACGGGCGTCGGC AGCG GCAGGCGCGCGACGA      TTTCCGCGTCGGTGC  67 413
        guaB 1358143 .. 1358180 +   -20  -4.86731   ATCACGCAATGCATC   GCGCACCGG-CAGAGCC CGCCA GGTTCTGGCCGGTGCGC   TTTTATTTCCAACCG 100 58
CWR60_RS06425 NONE
CWR60_RS06430 1360174 .. 1360188 +  -4.2  -3.53012   GCCGAGTTCGCCTAC               GCCTTC CTG GAAGCC               TTTGGCAACAAGACG  51 159
CWR60_RS06440 NONE
CWR60_RS06445 NONE
CWR60_RS06450 1367382 .. 1367392 +  -4.6  -3.41839   GATCGCAGACAACCT                 TCCG GTA CGGG                 TTCTGCCTCTGTCTA  51 505
CWR60_RS06460 1368803 .. 1368813 +  -8.2  -3.21199   TGTCGGCGGCGAGCT                 GGCC CTG GGCC                 TTGGCTTGGTGAATC  56 517
CWR60_RS06470 1371169 .. 1371186 + -12.7  -2.53263   CCAGCAGCAGGGCGG             CCAGCGC CGCG GCGCTGG              TGCGTTGGGCATGGC  62 411
CWR60_RS06480 1372641 .. 1372654 +  -2.3  -2.77401   GGCTCGCGGCGCGGG               CCTGG CCAG TCGGG                GTTATATGGTATTTT  38 59
CWR60_RS06485 1374008 .. 1374020 +  -2.6  -3.06492   GAGGCTGGCTAGGCG                CTGC CGGAT GCGG                TCTTCGAGTACCTGC  41 231
CWR60_RS06505 1379314 .. 1379324 +  -2.4  -3.02461   GCAGCAAGGCCAGCA                 GGCG CGA CTCC                 TGTTCCAGCGGATTG  41 461
CWR60_RS06515 1381077 .. 1381091 +  -2.7  -3.02511   ATAAAGAACGGTTGA               AGGGC ATCAG GCCCG               TATTGCGAACATGGA  42 26
CWR60_RS06520 1382349 .. 1382366 +  -9.1  -3.01712   TGCCGCGGCGTGCCG             GGGC-CGG GGT CCGCGCCC             TGTTCGGCGAAGCGG  57 181
CWR60_RS06535 1384908 .. 1384941 +  -5.9  -4.08767   TGAAGGACCGCTATG     CGGTGGT-CGGCGTGG GCA CCACGCCGTATGGCAG     TTTTCCCGAGCTGGA  66 76
CWR60_RS06545 1386422 .. 1386432 +  -2.4  -2.78547   AACCTGCCGGTGTTC                 CGGC TGC GCCA                 TGCTTACTGAGATGA  38 5
CWR60_RS06550 NONE
CWR60_RS06555 NONE
CWR60_RS06560 1390245 .. 1390302 +  -2.5  -3.86015   GGCGACATTCTCAAA TAGCCGCGGGCGG-CG-CCTGCAGGCC TTGCGC GGCCTGCAGCACCACCGAGCGCAGCCA TTTGTGGCCGACGTC  54 23
CWR60_RS06575 1393489 .. 1393512 +  -9.4  -2.81464   AACGCAATAGGACGG          CCGCGCGGGC AGGG GGCCGCGCAG           TATCATGGCTGGTCG  56 31
CWR60_RS06580 1395048 .. 1395062 +  -9.2  -3.44146   GATGGCCTCGAGCAG               CGCCGT GCG GCGGCG               TTCGTTGTCGCGGCG  61 372
CWR60_RS06590 NONE
CWR60_RS06595 NONE
CWR60_RS06600 1398267 .. 1398281 +  -4.3   -2.8478   GCGGCCACGCTCGTA               CGATT CGTTA AATCG               ATTTACTAACGTCGT  44 208
CWR60_RS06605 NONE
CWR60_RS06610 1401105 .. 1401126 +  -2.9  -2.94099   CGAGAAAACCGGCGG           GGCGCGC-TG AGC CATGTGGGCC           TATCTCGTCAGGCGA  41 16
CWR60_RS06615 1402309 .. 1402336 +  -2.6  -3.21416   CACCACGTCAATCCT        GCTGGGCGTG TCGGCCAC CGCCCTCAGC         TTCGTCGTGGGCGTG  42 257
CWR60_RS06625 1404531 .. 1404551 +    -6  -3.53012   CCGCGCGCGGGAGGC            GGCCGTGG CCTGA CAGCGGCC            TTTGCGGGGGGCGGC  56 13
CWR60_RS06630 1405738 .. 1405752 +  -4.9  -2.51966   CCGTCACCCTTGCCC               TGGGC AGCCG GCCCG               ATTCCTGGCATTTGC  42 75
CWR60_RS06635 NONE
CWR60_RS06640 1406880 .. 1406895 +  -5.4    -4.183   ATGGCCTGCAACTGC              TTGACG GTGG CGTCGA               TTTCTTCGGCCTTGG  66 221
CWR60_RS06650 1407898 .. 1407930 +  -8.4  -3.53012   CCAGCGTCGCGGCCG     TGGCGGCGCCGGC GGTTTCGG GCCGGCGCA-CCA      TTTCGCGCGCCGCCA  61 194
CWR60_RS06690 1415961 .. 1415976 +  -6.1  -2.82015   AGGCCATGTTCCTTG              CGCAG CACGTC CTGCG               TGTGCTCGATGTGCG  48 63
CWR60_RS06700 1417282 .. 1417332 +   -11  -3.28712   TTCTGGCGCGCGCGC GGCCGTAGCC-GCGGCGGCTAGG GCTGCG TCTCGGCGCCGCCGGCCAGGGCC TTGTAGAGCACGACC  66 18
CWR60_RS06730 NONE
CWR60_RS06735 1426405 .. 1426461 + -11.6  -3.05384   TGATCAGATCATCGG CAGG-CTG-GCCGGGC-GGGGGCCGCG CTCGAA CGCGGCGTCCAGGTCGGCGCAGTCCTG TTCGCTCAGCGCCAG  65 38
CWR60_RS06750 1430913 .. 1430927 +  -5.6  -3.78934   CTGGTGAGCTACAGC               GCCAAG GCC CTGGGC               TTCTTCTAACCCGGG  60 2
CWR60_RS06765 1434375 .. 1434385 +  -8.2  -3.33162   TGGTCAACGTGGCGT                 CGGC ATT GCCG                 TTCTCGAATACGCTG  59 280
CWR60_RS06775 1436367 .. 1436383 +  -9.3  -2.75481   TGCTCCTGGGTGGCA              GGGGCCC CGC GGCCCCC              TGGTTGGAATTGGCA  55 392
CWR60_RS06795 1438759 .. 1438786 + -17.8  -3.02144   TCGCGCAGCGTGGTT        TCGCGGTAGGCGC GCA GCGCC-ACCGCGA        TGTTGGCGACGGTAA  82 361
CWR60_RS06805 NONE
CWR60_RS06810 NONE
CWR60_RS06830 1444791 .. 1444809 +    -3   -3.1372   GGGCTGGCCATGGCC             GGCCGG CGCGTAA CCGGCG             TCTTCGTAGGCCGTG  43 272
CWR60_RS06850 1448068 .. 1448083 +  -3.2  -2.52516   CAGCGGATATTGATC              GCCG CCATCGCC CGGC               CTTGCTGGTCGACGC  39 120
CWR60_RS06870 NONE
CWR60_RS06875 1451885 .. 1451929 +  -3.4  -3.72576   CGTCGCGCAGCGGCG GCGCGCCGTACAGGCGGCTGT ATTC GCGGCTGAAT-TGCGACGCGC TTTCGTAGCCGACCC  55 75
CWR60_RS06905 1458121 .. 1458145 +  -2.7  -4.07568   CCGTACCAGCGGGCA          CGGCATTGCGG CGG CTGCAACACTG          TTTTGCGCCGGCGCC  59 49
CWR60_RS06910 1459409 .. 1459442 +  -9.5  -3.68222   CAGCTGCCGGGCCAG     GTCGCGCGCCACGTCG ACC TGGCGC-GCGTGCGAC     TTGTTCGAATTGGCG  71 237
CWR60_RS06930 1463125 .. 1463142 +  -2.6  -3.61764   GCTAGCGCGGCCAGG             GCAGGG ACGGCG CCATGC              TTTACCGCTTCCTGG  48 36
CWR60_RS06935 1463497 .. 1463513 +  -3.5  -2.61548   GGCGCCGGCGGCGGC              GCGGCGG AAT CGGCCGA              TGAGTTATGCTGGAC  40 6
CWR60_RS06940 1464584 .. 1464622 +  -3.6  -3.72324   GCGGTTGAGGTGGCG   GGTGAACTGGCCGCTTTC GAT GAAGGAGGCCAGGGCCCA   TTGTTCGTGGCGATG  54 357
CWR60_RS06950 1466597 .. 1466616 +  -6.4  -3.14132   AGGCGCCAGTCCCCA            TGCCGG GACAGGCA CCGGCA             TTCCTGCGGGGGCAG  51 91
CWR60_RS06975 1472678 .. 1472714 + -18.7  -2.71924   ATGGCGGCCTGAGGC   CGGAGC-GGCGCGGCG TTTCGC CGCCGCGCCGGCGCCG    CTTTGCGGCACAATC  87 29
CWR60_RS06980 NONE
CWR60_RS06985 1474193 .. 1474224 +  -4.2  -3.65812   CCACCCGCATATGGC      CGCCGAACGCGGCCG CGG TGGCCACGCA-GGCG      TTCTCTTCGCGGCCG  51 339
CWR60_RS07000 1477305 .. 1477322 +  -2.5  -2.78384   GAAGTTGATGAAATT             GGCCAGC ATCA GCGCGCC              TATCATCACCACGAA  39 363
CWR60_RS07055 1488626 .. 1488667 +  -2.6  -3.86897   CCCGGCAGCGGGTCA GGCGGCGTCCAGCCGCTG CCTGCC CCGCACCAGGTCGGCGCC  TTTCTCGCCGATCAG  54 42
CWR60_RS07080 NONE
CWR60_RS07085 1495303 .. 1495322 +  -4.8  -3.03124   CGTCCGGGTGGCGCG            GCGCGCCG AAGG CGGCGAGA             TATTCGGGGCTGGCG  46 430
CWR60_RS07095 1497158 .. 1497179 +  -5.1  -3.73224   ATGGCCTTCTTGGTG           TGGCCCAGCG CGA CG-TGGCCCA           TTTCATGGCCGATCA  58 494
CWR60_RS07105 1498363 .. 1498401 + -10.1  -3.05384   GCATATTTCCAGCGG   TTATAAGGGGCCCGCGC GCCAG GCGCGGGCCCCGTCCCA   TTCCATCGAAGCCGC  60 92
CWR60_RS07110 1499856 .. 1499883 +  -5.4  -3.53444   ACCGCATGGCGCGGC        AGGGGCTGGCCG GCCA CGGCGAGTTCCA         TTTCCAGCCGCATGC  52 270
CWR60_RS07120 NONE
CWR60_RS07125 1503263 .. 1503280 +  -9.8  -3.07816   GCATCAAGCCGTAAC             GCCCCG CCTGCC CGGGGC              TTCACTCCGTGGCAG  60 27
CWR60_RS07135 1505823 .. 1505844 + -10.1  -5.78622   GAAGTTGAGTGATTG           CGGGTGTTG GCGA CGGCACCCG            TTTTTTTTGGGGTGG 100 50
CWR60_RS07160 1508737 .. 1508768 + -25.2  -2.52464   GCAGCCTGAGCGTCG      CGCCGGCCCGCGGCG CCG CGCCGCGGGCCG-CG      TCCATTCCCCAGGAG 100 32
CWR60_RS07165 NONE
CWR60_RS07170 1509606 .. 1509623 +  -4.8  -3.81951   CGTGCGCGCAAAGGG             CGG-GGC ATGAG GCCGCCG             TTTCATACTATAGGC  58 16
CWR60_RS07175 NONE
CWR60_RS07180 NONE
CWR60_RS07185 1512102 .. 1512138 + -22.9  -3.53224   CAAGGGATAGGGCGG    ACGCGGCGGGTCCGGCC GAT GGCCAGGCCCGCCGCGC    TTTCCCCCCGGCCTA 100 31
CWR60_RS07215 NONE
CWR60_RS07220 NONE
CWR60_RS07225 1519790 .. 1519800 +  -2.4  -2.94416   ACCCATCGCGCTCGT                 CGAC CTT GGCG                 TCTGTCATGAACATC  41 40
CWR60_RS07230 NONE
CWR60_RS07235 1522125 .. 1522152 + -10.6   -4.2535   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT  89 104
CWR60_RS07270 1527599 .. 1527642 +   -13  -3.86015   TGCTGCTGGCCGCCC GACAGCGTGACCGGCCAGGC GTCG GCCTTGGCGGTCATGCCGAC TTTCTCCAGCAGCTC  81 365
        cadR 1532722 .. 1532732 +  -5.4  -4.09243   GAGAATATGTTTTCT                 TCTC GTC GAGA                 TTTTCCGCGCCTATG  64 105
CWR60_RS07300 1533358 .. 1533375 +  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 54
CWR60_RS07310 NONE
CWR60_RS07315 NONE
CWR60_RS07320 1538601 .. 1538630 +  -7.7  -3.28712   AGCGTGTAGGCGGCC       GGCTGCACCAGCGC GCC GCGC-GCGGCGGCC       TTGTGCGCCAGCGCG  55 297
CWR60_RS07330 NONE
CWR60_RS07335 1541690 .. 1541721 +  -9.5  -3.31144   CGGCGAACGACGCCG     CGCTGCGG-CATACC GCGC GG-ATGACCGCGGCG      TTCTGAGCATCGGCC  63 466
         ggt 1544824 .. 1544843 +  -7.1  -3.43492   TCCACGACTGCGCCA            GCTGCGG CACGAA CTGCAGC             TTCTCGTCGATGTCG  56 269
CWR60_RS07360 1546181 .. 1546198 + -14.1  -4.65895   GATCGGCGCGGCGCG             CGGGCGC CGCC GCGCCCG              TTTTTCGGTGGCGAC 100 67
CWR60_RS07365 NONE
CWR60_RS07370 1548321 .. 1548339 +  -4.4  -3.33744   CCTGCAACGGGTGCG             CGGCGCCG ATG TGGCGATG             ATTTTTCAGGAGCCG  49 315
CWR60_RS07385 1551256 .. 1551312 + -12.3  -3.28745   GGGACAGGCACCCCT GCCGCAGCGG-TGA-CAGGCGC-CCGGGG CAG CCACGGCGCGCCGGATCAGCCGC-GCGCC TTGCGTTCTTGCCAG  71 115
CWR60_RS07405 1553965 .. 1553997 +  -3.4  -3.80733   AGCGGCCGCCGCCGG      CCCGGCGATT AACGCAAATTTAA AAACGCCGGG      TTATTCTGGCCTGCC  56 69
CWR60_RS07415 NONE
CWR60_RS07420 NONE
CWR60_RS07425 1561007 .. 1561037 + -25.6  -3.55444   CGCGGCCGTCCAAAA       CAGACAGGCCGGCA AGA TGCCGGCCTGTCTG       TTTGCGCAGTGGCGG 100 46
        aceE NONE
        aceF NONE
        lpdA 1574167 .. 1574192 + -20.5  -3.01712   GCGGGGCGTGGGCAG         GCGCCTGTCCC CGCG GGGACAGGCGC          TCTTGCGCGCGCCGG 100 118
        flhD NONE
        flhC 1577994 .. 1578034 +  -4.6   -2.7386   AAAAGCACCAGAAAA CCCCCCATAACCCG-CG TTTTTGCC CGACGGGTCAGGGGGGA  TCATTGGCGTCGGTT  43 64
        motA NONE
        motB NONE
CWR60_RS07505 NONE
        cheA NONE
        cheW 1582918 .. 1582940 + -12.7  -3.90856   TGACGGCGGTCAGTC          CG-CGGGCGG CGCG CCGCCCGTCG           TTTCGTTCAACGCTT  82 38
CWR60_RS07520 NONE
CWR60_RS07525 NONE
CWR60_RS07530 1586597 .. 1586636 +  -2.1  -4.43909   CGACCGCGGGCATCG CGTTT-GACGCCCCGGTCC CAAC GGAGCGG-GCGTCCGGACA  TTATTTTCTTGGAGT  67 19
        cheY NONE
        cheZ 1587668 .. 1587680 +  -3.3  -3.28712   GGTCGACGACCTGCT                GGCCA GCC TGGGC                TTCTGACCAGGGCAG  46 7
        flhB 1589436 .. 1589448 +  -5.5  -3.23216   CGGCAATTTCGCGGT                CGGGA TCA TCCTG                TTCGTGATCCTGACC  51 394
        flgB NONE
        flgC NONE
        flgD NONE
CWR60_RS07590 NONE
CWR60_RS07595 1599257 .. 1599287 +  -2.2  -4.32034   CGGCCAGCTGATTAT       CAACGCGCGCGCCG AAG CGCCGCGCCAGGAG       TTTTCATCATGATGC  65 30
CWR60_RS07605 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL NONE
CWR60_RS07630 1607987 .. 1608022 + -22.6  -4.56597   CCAGGGCGGGAAAGC    GGCGATCCGCCGCGGC CAGC GCCGCGCCGGATCGTC     TTTTTACAGGCAGCG 100 92
        fliE 1622124 .. 1622145 +  -7.2  -2.88544   CCAGCAGCTCGGCCA           CCGCCGTG TAGAGT TGCGGCGG            TATATGGGCGTCCAG  50 518
CWR60_RS07745 NONE
CWR60_RS07750 1629016 .. 1629032 +  -3.5  -3.31415   GACAACGGTTTCATC              GCCGCAC AGT GACCGGC              TTCGATTTCGTCGTC  47 14
CWR60_RS07755 NONE
CWR60_RS07760 NONE
        rpsB NONE
CWR60_RS07790 1638393 .. 1638427 + -13.5  -3.83144   ACGCGTCATCGTAGG    GGCCGGCCAGGGCGGG GCTT CCCGAACT-GCCGGCC     TATTTCTTGTCTTAC  83 40
CWR60_RS07795 NONE
CWR60_RS07800 1639768 .. 1639819 + -10.8  -3.10344   ATCATGACCGTATAA TTCCGGTTGAGGTATCGGGGCCGT ATCG ACGGCTCCGGTGTCGATATCGGAA TCTGTTCCGTACGCG  64 26
        uppS NONE
CWR60_RS07810 NONE
CWR60_RS07815 1642757 .. 1642785 + -10.1  -3.59979   TCATTCGCCGGCAAT        CTCGGCCTGGCGT GAC GCGCCGGGCCGCC        TTTCGCGTCCACCCG  67 11
        rseP NONE
        bamA 1646574 .. 1646607 +  -2.9  -3.72893   GTTACGCATGAAAAC     ATGGGAAATGGCCGG TTGC CCGGCCGTCCCGCAG      TTTAGTGGCACAATA  53 65
CWR60_RS07830 1647227 .. 1647237 +  -2.4  -2.64218   CTGGGCCGATAAGCA                 CGCC CAT GCCG                 GTTCTGCTGGACCCT  38 29
        lpxD NONE
        fabZ NONE
CWR60_RS07845 NONE
CWR60_RS07850 NONE
CWR60_RS07855 NONE
CWR60_RS07860 NONE
CWR60_RS07870 1655570 .. 1655590 +   -14  -5.40072   CGGCAGCAGGAAAAA            GCCTCGCC CTTGC GGCGAGGC            TTTTTTTCGCCGGGC 100 46
CWR60_RS07885 1657868 .. 1657891 + -17.4  -3.59979   CGTGAGGTTCGACCC          GGGCGCGCCG GCCG CGGCGCGTCC           TTTCGCGTCCGCGCC  89 36
CWR60_RS07900 NONE
CWR60_RS07905 1660467 .. 1660480 +  -2.4  -2.62184   CTCGCCAACGACTTA               CGTT TACGTT AACG                TCATGTCGAGCGGCC  38 129
CWR60_RS07910 NONE
CWR60_RS07915 NONE
        mmsB 1663849 .. 1663865 +  -4.3  -3.08464   GGCCGGGCGGCCAGG              GCCATTC CGC GAGAGGC              TTGCATGCCTGATAC  47 50
CWR60_RS07925 1664294 .. 1664321 +  -6.8  -2.90075   TGACCGCGGTGCGGG        TGACGCCGCGTT GAAC GGCGCGGCGGCC         TATACTTGGCGCGCC  50 12
CWR60_RS07930 1665066 .. 1665089 + -10.2  -3.14132   GTATAGCCGGACAGC          CTAGCCGGCG GCGT TGCCGGCCAG           TTCGTAGGGCAGGGG  62 35
        mltG NONE
CWR60_RS07945 1667910 .. 1667929 +  -2.8  -3.16564   GAGCTGGTGGCGCAA            GCGGCATGA GCC TCG-GTCGC            TTCCTGCCCTGGCAG  44 17
        holB 1668972 .. 1668985 +  -9.5  -4.03078   CCTGCCAGTGACGAT               CGGGC CACG GCCCG                TTTCTCCTGTGATCC  75 30
CWR60_RS07955 NONE
CWR60_RS07960 1670743 .. 1670762 +   -15  -5.52384   CTCCACCTGATCACG            TGCCGCCC ACCG GGGCGGCA             TTTTTTTGCTCGGGG 100 94
CWR60_RS07965 1671621 .. 1671638 +  -5.6  -4.67982   GATGTATCCCTGTGG             CCGTAT CCATCC ATACGG              TTTTCTTCACTCCAA  77 39
CWR60_RS07980 1673941 .. 1673997 +  -7.3  -3.65902   TACGCGCCCCGCCTG GCCCA-CATCGT--CG-CGCTGGGGCAGG ACG CCGGCGCCGGCGACGCCGCGGTGCTGGGC TTTGCCTGCGATGCC  61 102
CWR60_RS07990 1676324 .. 1676354 + -12.5  -4.07687   CCGCATCGGCGTACC      AGGCAGCCGGCCTC GCAA GGGGCCGGC-GCCG       TTTTCAGCGCAGGCT  83 67
CWR60_RS08040 1686647 .. 1686695 + -10.8  -3.40163   GGCTTCGCGCGCCGG CCCCGAGTGGCTG-CGCGCGCCG GCGG TGGCGCCCATCAGCAGCGCGGGG TTGATCTTCATGATG  69 164
CWR60_RS08060 1693566 .. 1693618 +  -5.3   -3.0395   CGAAATGGCGCAGGA GCCGGGCGGCTCCTAGCGCGGCGCG AGCCG CGGGCAG-GCC-GGGGCCGACCGGA TGTTCAGGAATATGT  47 10
CWR60_RS08065 NONE
CWR60_RS08070 1695097 .. 1695125 + -11.7  -3.45031   ACACAACATGTTATG       GCGCGCGGCGCC GAAGGA GGCGCC-CGTGC        TTGAGTTTTTCCAGA  70 89
CWR60_RS08075 1695884 .. 1695904 + -15.4  -4.67607   CGCCCGGCGAACGAA            CCGGCGCC CTGGT GGCGCCGG            TTTCTTTATTGCGCA 100 68
CWR60_RS08085 1698102 .. 1698116 + -12.8  -3.09785   GCCGCAGGGATTAAG               CGCGCC GCT GGCGCG               TCTATTGCGGTATGC  69 73
CWR60_RS08090 1699043 .. 1699097 + -14.9  -3.57039   GGGCCGGACACGCAG CCCCATGCCGG-CCGTCCGGCTTGAC GCGG GTCAAGCCGGTGGATCCGGCAGGGCG TTATGGTTGTGCATC  81 96
CWR60_RS08095 1699641 .. 1699679 + -15.9  -3.32769   GCGACATTGCTATGA   TGGCCGGCTTGGCCCGC GTCCG GCGGGACGGGCCGCCCA   TTCGTCGTTTCCAGA  80 63
CWR60_RS08100 1700738 .. 1700758 + -10.3   -4.2558   TGCTAGACTTTTCCG            TGGGCGGCG ATC CGCCGCCGG            TTTTCCTAGGAGGTG  85 70
CWR60_RS08105 1701386 .. 1701432 +  -9.4  -3.04792   AATCGATGTCGCCGA GGCC-CTGGGC-GGCGCACGGCG AGCG CGCCGC-CGTCTGCCTGGCGGCC TGTTCCGCCTGGTAA  57 266
CWR60_RS08115 1703710 .. 1703746 + -12.9  -3.17075   CATCATGCGATAGCC    GGCCGTGGCCACGGC CTTGACC GCCGGGACCATGGCC    TTGGGTTCGCCCAGC  68 244
CWR60_RS08180 NONE
CWR60_RS08185 NONE
CWR60_RS08190 1717893 .. 1717942 +  -8.4   -3.9392   GCTGCGCCTGTACGG CGGGAC-GC-GCGCCGC-CGGGCGC TGA GCGCCAGCGCGGCGCGGCAGGCGGG TTGTTTACACTGGAG  70 1
CWR60_RS08195 1718536 .. 1718550 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 128
CWR60_RS08210 1721822 .. 1721835 +  -2.3  -2.83012   GATAGCGGGATAAGT               GGCCA TGCG TGGCA                TCTGATCCTCGAATT  40 78
CWR60_RS08215 1723631 .. 1723659 + -18.2  -4.13767   CCGCTTGCCTCCACA       CGCGGGCAGGGCA GTCA TGCCC-GCCCGCG        TTTTGCCGTGCCCGC 100 69
CWR60_RS08220 1725357 .. 1725389 +  -9.8  -2.85351   CGCCGTCGTCTACTT     CGGCTGACCGGCCCGC CGC GTGCGCCGG-C-GCCG     TCTGCTATAAGGCAG  59 19
CWR60_RS08225 1726619 .. 1726646 +  -7.6   -3.2819   GGCGTCCTGCACCAG        CAG-GTCGGCCAG GCG CCGGCCGACGCGG        TTGCTGGTGTTGCCT  55 242
CWR60_RS08235 1727520 .. 1727541 + -10.9  -3.40775   CCGCGCGCCGGAAGC           TGTGCCATC AACG GATGGCGCA            TGTTTCCGTAGGCGT  68 79
CWR60_RS08240 1729226 .. 1729273 +  -8.5  -4.32201   GGCGGGCAGGCTCAC TGATC-CTCTCCGCGCA-GGTGC GTGT GCTCCGTGCGTGGAGAGTGCTTA TTTTCGATTGATTGG  79 162
CWR60_RS08245 1731169 .. 1731197 + -13.2  -3.62522   GCGCAAATGGAAGAA       CGCCCCAG-CTCG CGGA TGAGTCTGGGGCG        TTCTTGCCGGCCTTC  79 117
CWR60_RS08250 1731704 .. 1731722 +  -6.7  -4.11216   CACCCGCCGACGTCG            CGCGTTGC AGCC GCA-CGCG             TTTTGCAAGTAACGG  67 137
CWR60_RS08255 1732044 .. 1732059 +  -3.2  -3.10775   GTTATCGTCGCGGTT              GCGC CACCTGGA GCGC               CTTTTGCATGCGCGT  44 105
CWR60_RS08260 1733270 .. 1733282 +  -6.3  -2.88544   CGAAATCCTTTACAA                TTTGG CTA CCAAA                TGTGTAGGAGTGGGC  48 93
CWR60_RS08265 1733526 .. 1733547 + -17.3  -4.32857   TTGAGGGGCGCGCGA           CGGGCAGCC GGCA GGCTGCCCG            TTTGTATTTCGCCCG 100 37
CWR60_RS08270 1734029 .. 1734065 + -15.7  -3.14132   CATGCCACCGGCATC    CGGCCGCTCGTCGACCT GCA AGGCCGTCAGGCGGCCG    TTCCTGCACGGGCCG  77 95
CWR60_RS08285 NONE
CWR60_RS08290 1738678 .. 1738707 +  -8.5  -3.09492   CGACGGCGGCCAGCT       CGCCGGT-CTTGCC GTC GACCAGCACCGGCG       TGTTCAGCTTGGAGG  55 479
CWR60_RS08305 1740739 .. 1740772 +  -5.8  -3.62046   CTGCCCGGGCTGCTG     CACGCGCGCGGGCG CGCCGT CGCTGGGGCGCATG      TTGTTCAGGAAGTCG  57 255
CWR60_RS08320 1745892 .. 1745914 +  -7.6  -3.64822   GCAGAAGGCGATCGA           CGCGCCGC GGCGCAG GCAGCGCG           TTTCGATGACCAGGT  60 133
CWR60_RS08330 1747819 .. 1747847 +  -2.9  -3.59738   GCCTTGGCGCGCATG        GCGTCCTTGACCG AGT CGGACAGGCGGGC        TTTGAGCGTATCGTG  50 464
CWR60_RS08340 1749205 .. 1749228 +  -3.8  -2.90571   TGCCGAAGTGTTCGG          CACCGGTG-GC GTG GCATAGCGGTG          TATGCTTGCCGCGTT  43 7
CWR60_RS08345 1749716 .. 1749753 + -11.4  -2.67021   GTAGGTCCGGCCGCG  CCGG-CGGCGGCC--AACC TTA GGTTATGGCCGCTGTCCGG  ATTGCTATTTGGCGC  61 37
CWR60_RS08370 1757497 .. 1757519 +  -6.3  -3.84451   GTCGCGGTCGAGCTG          GCGCGCATAGG TGA CC-A-GCGCGC          TTTCCGTTTCGCGCA  63 254
CWR60_RS08405 NONE
CWR60_RS08410 1765593 .. 1765616 +    -8  -3.27475   CCAGCACGTACCGGT          GCCCGTGCAG GTTG CGGCACTGGC           TGTTGTGGTCGGGGA  55 406
        cysT NONE
        cysW 1770671 .. 1770687 +  -5.8  -3.53012   TGGCGGTGCGGCCGG             CGGCAGC CTGA GC-GCCG              TTTACCAGGAGACGA  54 15
        cysA NONE
CWR60_RS08450 NONE
        cysD NONE
CWR60_RS08460 1774845 .. 1774855 +  -2.4  -4.47707   CGGCCGCCAGACTCC                 CCGC CAG GCTG                 TTGTTTTTAATCCAA  67 42
CWR60_RS08465 1776347 .. 1776367 +  -4.5   -3.6215   GCCAGTGGTAGGGGG            CCGCGCCCG TCG CGGCAGTGG            TTTGACATGCATTCG  52 80
CWR60_RS08470 1776887 .. 1776902 +  -4.6  -4.62069   CCAGGCAGCCAGCCA              GTCGGC CTAT GCCTAC               TTTTTCCCGTAGCAG  75 86
CWR60_RS08480 1778440 .. 1778490 + -21.5  -2.87564   TTGTGCCTGGCACGG C-TTTCCGCGATAAAAGGGCACCC GCAA GGGTGCCCTTTTATCGTGAAAAAG TATCTGAAAGAATGC 100 82
CWR60_RS08485 NONE
CWR60_RS08490 1780753 .. 1780792 +   -15  -3.64703   CAGGCACCCCGGAAG  TCAGCAGGTGCCTGTCCT CGTG GGGACAGGCACCTGAGGG   TTTCAGTAGGGGCGC  83 242
CWR60_RS08505 NONE
CWR60_RS08510 1784658 .. 1784673 +  -2.4  -4.10657   CAGCACCAGGGCCTT              GTCGGG GATA CCCAGC               TTTTCGAGGATATCG  61 414
CWR60_RS08520 1786302 .. 1786337 +   -11  -3.97636   GCCCACGCCGACAAG    CAGGC-GCGCCGCAAGG CGG CCTGACGGCGCCGCCGG    TTTCTCCATTCCAGT  79 2
CWR60_RS08525 NONE
        paaI NONE
        paaJ NONE
        paaK NONE
        paaN NONE
        paaB NONE
        paaI 1792520 .. 1792542 + -11.2  -3.01712   GCCCGGCGACATCGT           GCACGTGGCC TAC GGCTACGGGC           TGTTCACCGGCGGGC  62 504
CWR60_RS08595 NONE
CWR60_RS08600 NONE
CWR60_RS08605 NONE
CWR60_RS08610 NONE
        potA NONE
CWR60_RS08620 NONE
CWR60_RS08625 NONE
CWR60_RS08630 NONE
CWR60_RS08635 1807875 .. 1807893 +  -5.2  -4.36914   ACCGTCGGCGCCATG             TTGCCGGC CGC GTCGGTGA             TTTTCTCGGCCAGCA  69 331
        rmuC 1809789 .. 1809828 +  -5.5  -3.90744   CTGAGGAGCAGGCGC  GGGGGCGGAGAGCCC-CC GGCGG GGCGGGCGGTCCGCCCAA  TTCTTTCGCCGCCAA  63 37
CWR60_RS08650 1811491 .. 1811505 +    -7  -2.96984   GGCCCCGATTCTGGC               CCGCGC CTG GCCCGG               TATCTGCTAAATTTC  51 1
        rpiA 1812330 .. 1812358 +  -5.2  -4.07885   CGGGTCATAACCTTG       CG-GGTCGGGCAG CCCT CTGCGCAACCGCG        TTTTCAGGGGCACTA  64 106
        phoU 1813327 .. 1813382 +  -8.1  -3.05596   GGTTCATATGGCCAG GCGGCCTGCTCGCCCGGCGCCAGCCGC AGCA GCG-CGGGCGCCTCGCCA-TAGGCCGA TTCAATCCGCGCCTG  52 169
        hrpA 1820908 .. 1820948 + -17.6  -3.57263   CGGTAGGGGGGCTGT CCCACGGG-TGCCTGTCCC CGCG GGGACAGGCATCCCGAGAG  TTTGCGGGTGCCAGT  90 35
CWR60_RS08690 NONE
CWR60_RS08695 NONE
CWR60_RS08700 NONE
CWR60_RS08705 NONE
CWR60_RS08710 1829590 .. 1829621 + -13.6  -3.04144   ATAGGGCGCGTCGTA      TTCGCGCCGTGCCG GGGC CGGCGCGGCGGGAC       TGTTCCAGATGAACA  69 250
CWR60_RS08720 1832039 .. 1832056 +  -9.8  -3.76641   TATGAAGACAGGCGC             CGCCGC GGATAA GCGGCG              TTTGCGTATTGCGCT  74 14
CWR60_RS08725 1833592 .. 1833620 +  -2.3  -3.27743   GCCGTTACACCCAGC       CGCGCAGCCAGT AGACGA ACAGGCCG-GCG        TATTCCTTGATGATG  44 438
        msbA 1837333 .. 1837349 +  -6.5  -3.53012   CAACACCTGTTGCGC              CCATTGC GGC GCCATGG              TTTCGGCAGCGGCCA  55 148
CWR60_RS08755 NONE
CWR60_RS08760 1840603 .. 1840616 +  -3.7  -4.74103   TCATGCGCGTGCGGT               CGCGC GAGA GCGCC                TTTTTCAGTTCGGCC  77 418
CWR60_RS08770 NONE
CWR60_RS08775 NONE
CWR60_RS08780 1844313 .. 1844341 +  -8.2  -3.27525   AAGGCGAGAGAGCAA        CGCTTAGTGCTG CGAGT CAGTGTTAAGCG        TTGGGTTTGGCCCGA  58 85
CWR60_RS08785 1847567 .. 1847577 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAGATTCAA  61 127
         rrf 1847752 .. 1847786 + -19.5  -4.56597   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAT GGCTCGCGGGGTTTTG     TTTTTGGGGGGACGC 100 36
CWR60_RS08810 1851474 .. 1851488 +  -2.7  -3.27298   CGGCCGATGCTGCAG               CAGCG GGTGG CGCAG               TTCCTCGTTGGCGCG  45 300
CWR60_RS08875 1865558 .. 1865612 +   -19  -3.84712   TACGCCGGCAACGCC CGCTAGGATGCGGCCGGCCCCGGCGC CAT GCGCCGGGGCCGGCCGTCGCAAATCA TTTCATCTCCAATTG 100 20
CWR60_RS08880 1867145 .. 1867157 +  -4.7  -2.71712   GTCGCCGGCCCCGTA                CGCCG GAG CGGCC                CTTTCCCGGGCCGCG  43 145
CWR60_RS08885 NONE
CWR60_RS08890 1869367 .. 1869386 + -11.4  -4.11692   CGATATGATGGAAGA            CGGTCACC AGTG GGTGGCCG             TTTTCCCAATCGCTA  82 78
CWR60_RS08895 1869796 .. 1869811 +    -6  -2.83112   GGCCGCTGAGGCATG              CCGCGG CGAG CGGCGG               TATGATCGATTGCAT  48 32
CWR60_RS08900 1871173 .. 1871191 +  -4.4  -3.57797   ACCAACCTTCGCTGT             CCGAAGCC GAC GGCATCCG             TTATCTGCATTTCGG  52 155
CWR60_RS08910 1872832 .. 1872842 +  -8.2  -3.06696   GCCGGCCTGATCGCC                 CGGC TGG GCCG                 TCTGTTCGAGCGAGA  55 84
CWR60_RS08915 NONE
CWR60_RS08920 1874833 .. 1874849 +  -2.1  -2.98719   CCGGAGACTAGACAA              GGTGAGC AAC GCCAACC              TATATGCTGTGCTGG  41 30
CWR60_RS08925 NONE
CWR60_RS08930 1877650 .. 1877681 + -11.4  -4.07885   GGGATCGCATGGCGC      GGGCTTGCCCGTGC GCGA GCCCCGGCGGGCCC       TTTTCAAGGAGCGTG  82 133
CWR60_RS08935 1878218 .. 1878237 +  -5.6  -3.32343   GTGAAGTAAGGGTTG            C-GCCGTCC CGC GGCCGGCCG            TTCTAGGGATATCCC  51 32
CWR60_RS08940 1879352 .. 1879383 + -20.8  -2.71712   TCAAGTAATCGCGTA      TTCGGCCGGGCGCC GTGC GGCGCCCGGCCGGC       ATTTCCACCGAACAC 100 33
CWR60_RS08945 NONE
CWR60_RS08950 1881194 .. 1881251 + -10.4  -3.77196   CCCAGCATCACGCTG GCG-GCGTCGAACAGGGCGCAGACCGGCG TGC CGGCGGCCAGCGCCAGG-TCG-CGCGCGC TTTCCTCGGTGATGA  71 79
CWR60_RS08960 NONE
CWR60_RS08965 1884257 .. 1884276 +  -6.4  -3.12449   AGGTCTTGCCGCTGC            GCACCGTGC ACG GCATGG-GC            TATGTGTTCCTGGCC  51 417
CWR60_RS08975 1885825 .. 1885856 +   -15  -4.26076   GCCAGCAGTCCTAAG      CGGCGCGCGGCGCC CGAC GGCGCCGCGTTCCC       TTTTCGTGAGCATCG  95 27
CWR60_RS08985 NONE
CWR60_RS08990 1891342 .. 1891360 + -11.6  -2.56271   GCGGCCACGCCTGAA             GCAGGGCG GGG CGCCCGGC             GTATTATCATCACGA  61 27
CWR60_RS08995 NONE
CWR60_RS09000 NONE
        uvrC 1894785 .. 1894797 +  -4.7  -2.63596   CATGGCTGACATCCG                CCCGC CGC GCCGG                TGATGTAGCATACGG  42 32
        pgsA 1895476 .. 1895486 +  -8.2  -3.85698   GTGGCGGGCTGGTTC                 GCGG CCG CCGC                 TTTCTGGAGACCGCG  68 111
CWR60_RS09015 1896820 .. 1896851 + -15.8  -3.61764   TGAACGCGGCTACTG      GCGCGCCGTGCGGAC GTC GGCCG-GCGGCGCGC      TTTCGAAGTTGCTGC  83 38
        aceA 1899277 .. 1899319 +   -22  -2.90392   GTCAAGGCGGCGTGA TTTTCCGGCGCCCGTCCCCG GCA TGGGGACGGGCGCCAGCAAG TGTAGTTGCAGGGTG 100 26
CWR60_RS09030 NONE
CWR60_RS09060 1906567 .. 1906585 +  -5.2  -3.21099   GGTGTATTTCGATTC             GGTCACCA TGT TCGTGGCC             TTCCTGCTGACCGCG  49 482
        ccoS NONE
        ccoN NONE
        ccoO NONE
CWR60_RS09085 NONE
        ccoP 1911118 .. 1911133 + -10.4  -3.36273   CGTGCTGCTGGTGAT              CAGCGC GCTG GCGCTG               TTCCTGTTCACGGCC  65 455
CWR60_RS09100 NONE
CWR60_RS09105 1912751 .. 1912769 +  -4.5  -2.66695   CGGCGACCAGGACGA             GGCGC CGTTCTGAA GCGCC             GTGTTTGCTGCGACG  42 13
CWR60_RS09110 1913606 .. 1913641 +  -3.8  -2.52464   CGATTGCTATAGGCG    CCCGCATGGCGGGCGCC GCG GGAGGCC-CCATGCTGA    TCCGTTCCGAAACCC  40 29
CWR60_RS09115 NONE
CWR60_RS09120 NONE
CWR60_RS09125 1916366 .. 1916393 +  -6.2  -3.01712   GGCCCGGATGGTGGC        GGCCGTC-AGCTG CGC CAGCGCGACGCCC        TGTTCGGGCCCGGCG  48 476
CWR60_RS09145 1921701 .. 1921715 +    -7  -4.59773   TGCGGCGGGGGGGTT               GGGCGC TAG GCGCCG               TTTTTCAGGATCGCG  79 119
CWR60_RS09155 1922676 .. 1922716 + -16.2  -2.71011   GCGTCTCCTGCCGCG  GCTAGCGCGGCGCTAT CCGCATACC ATAGCGCCGCGCCGGC  TCGTTGCCAAGGCAT  77 198
CWR60_RS09200 1930559 .. 1930605 +  -5.1  -2.97188   GCTCGCGCGCACCCC TGGCG-GATGCGCGGGC-CGG ACCGGCC TCGAGCCTGCGTGGCGCGCCA TGTCTCGTCCTGTCC  47 111
CWR60_RS09205 1931515 .. 1931531 +  -5.7  -2.79501   GATGCGCAGGCATAG              CGCCGCG GCG CATGGCG              TATCCTAGGACTATG  45 26
CWR60_RS09210 1931792 .. 1931833 +  -4.3  -4.08216   TGCTCGGCCAACGGG CCG-CTGGGCAGGGTGCCGT CTT GCGACATCATGGTCAGCCGG TTTTCGCCGACCTGG  60 73
CWR60_RS09220 NONE
CWR60_RS09225 1933837 .. 1933877 +  -6.6  -2.78596   CCGGGCTACCATAGG CGCAGCCATCCGGCGGCCG CCAT CGGCCGCCCGGCG-CACCG  TATCGTCACGAGGTA  47 111
CWR60_RS09230 NONE
CWR60_RS09235 1934477 .. 1934500 +    -3  -4.07568   CTGACCTTCTGCGCC          GCGCCGGC GATGGTAA GCTGGCTC           TTTTCCGCGCGGCCG  59 37
CWR60_RS09240 NONE
CWR60_RS09245 1935725 .. 1935754 +  -7.7  -3.21395   GCCCCCGCGCCAGCC       GC-GTGGCGCCTTG CGC CTCGGCGCCGCAGC       TCTTGTCCAGCAGCT  53 280
        clpB 1940350 .. 1940373 + -13.2  -5.48063   CGCCCTGCCTCTCAA          CCCCTGGATCC AAT GGA-CCAGGGG          TTTTTTCTGTTCGCT 100 69
CWR60_RS09265 1942765 .. 1942798 +   -11  -2.68942   GCTTGAGGGTGTCGA     CGCGATGC-CCGCGC ACCAG GCGCGGCGTATCGGG     GTTCTGTCCGGCGCT  59 350
CWR60_RS09275 NONE
CWR60_RS09280 NONE
CWR60_RS09285 1946163 .. 1946200 +  -6.4  -3.14132   GCCACGCCCAGGCCT  GCCTTGACCAGCGCCGCCT GCG AGGTGGTGCTGG--A-GGC  TTCGTAGAACGGCGC  50 268
CWR60_RS09295 1948427 .. 1948444 +  -2.5   -5.0538   GCCAGGTACTGCGCG             CCGGCGC CTGA GAGCCTG              TTTTTTCCCCTACGC  79 15
CWR60_RS09300 1949918 .. 1949928 +  -4.6  -2.73771   GCACTCGCAGGTCGA                 TGGC CTG GCCG                 GTTTGCGCGATGTGC  43 502
CWR60_RS09330 1955437 .. 1955469 +  -8.4  -3.82205   TTCGCCTCGATGGCG     CTGGTGGTCAGCGCG CTGG CGCGC-GGCTACGAG      TTCTTCATGTATTAC  68 512
CWR60_RS09340 NONE
        crcB 1957031 .. 1957053 + -11.9  -3.02144   CGGGCATCGGGGCCA           GGCGCGCCG GGTGG CGGCGGGCC           TGTTCGGCCACCTGG  62 275
         alr 1961097 .. 1961120 +    -8  -2.56596   GAGCATTGTGCGGAT          CGCCGGCGGG CCGG CCTGCTGGCA           TGAATTGCTACGCAA  50 39
CWR60_RS09370 1962141 .. 1962163 +  -5.5  -4.45399   AGGCCGGATCGTCAC          GCTGGC-GCG CTGA CGCCGCCAGA           TTTTCCTGTTGCTGT  72 257
        radA 1966560 .. 1966570 +  -4.6  -3.13299   CGTTGATGGCACGTT                 CGGG GAG CCTG                 TCTTGAGTCTGCTGG  47 35
CWR60_RS09395 NONE
CWR60_RS09400 1967996 .. 1968017 +  -2.1  -3.53012   CATCCTCCCAGCAGG           CCGACGCTGC CCA GC-GCCACGG           TTTGCAGCACCAGCG  48 289
CWR60_RS09410 1969973 .. 1969998 +  -7.6  -3.01924   CCCAGGTACTGCCGA         CTTC-GCGCTG CTGGC CGGCGCCGAAG         TGTTGCGCCAGGATG  53 358
CWR60_RS09445 NONE
CWR60_RS09450 NONE
        maiA 1977011 .. 1977032 + -17.3  -5.67063   GCGCCCAAGCAAAAA           GGGCAGCCC GGAT GGGCTGCCC            TTTTTTTCTGGTGCC 100 45
CWR60_RS09465 1977415 .. 1977436 + -12.3  -5.09762   CGTCGACACAAAAGG           GCCGTTCAC GCAA GTGAGCGGC            TTTTTGTATTGCGCT 100 77
CWR60_RS09475 1979425 .. 1979445 +  -6.7  -4.14392   TGGGCGACGATCACG            GTCACGGGC GCG GCCAGTGTC            TTTTCCAGGTTGCCG  69 418
CWR60_RS09485 1980758 .. 1980784 +  -9.3  -3.85698   ATCAAGACATTACAG         CCGGCCTGGCG CGCGA CGCCAAACCGG         TTTGTCCGGGCAGGC  71 92
        scpB NONE
CWR60_RS09500 1984951 .. 1984970 +  -9.3  -6.38039   GGCCAGGCAATACGG            TGGGCTG GGCGTG CAGCCCA             TTTTTTTTTTGAGTG 100 453
        rimP NONE
        nusA NONE
CWR60_RS09515 NONE
        rbfA 1990368 .. 1990397 +    -5  -2.60341   TGTTCCCGACGAGCC       CGAAGACCAGTCC TGACC GGGCTG-TCGTCG       CTGCTTTTTCTCCTT  42 10
        truB NONE
        typA 1993040 .. 1993066 + -22.4  -4.65895   GCGGTGCCAGCGCAA         GGGTTGTGGCCG TGG CGGCCACAACCC         TTTTTACATGCAACC 100 66
        polA 1997760 .. 1997785 + -17.5  -2.69151   GCGCACTGATGCGGC         CCCGGCCGGCG TCCG CGCCGGCCGGA          TACTGTCTGACAGCC  80 32
CWR60_RS09555 NONE
CWR60_RS09560 1999551 .. 1999576 + -21.9  -2.52676   ACCTGTAGCGGGCCG         GGGCCTGCCCG TGCT CGGGCAGGCCC          TCAGTTGCCCGCGTC 100 33
CWR60_RS09570 2002880 .. 2002909 + -17.9  -3.12351   CCCTGCGGGGTCTGC       AGGTGCCTGTCCC AGCG GGGACAGGCACCC        TTCCCTGTGGGGGGA  86 111
CWR60_RS09585 2010248 .. 2010265 +  -6.9  -4.25016   CGGGGGTCGGGACGG             GCGTGGC GCAA GCCAGGC              TTATTTCTTCATCAT  72 75
CWR60_RS09600 NONE
CWR60_RS09605 NONE
        parC 2017136 .. 2017151 +  -8.2  -3.22475   GTGCGTCCCAGGCAG              CCGGTG CTGT CGCCGG               TGTTCTGAGCGTGAA  58 2
CWR60_RS09615 2018621 .. 2018635 +  -3.4  -3.67976   GCTTGCGGCCGGCGG               CCTCGC CCT GCAGGG               TTTCGCCTTCGTCCA  55 273
CWR60_RS09640 NONE
CWR60_RS09645 2025968 .. 2025979 +  -7.2  -2.92921   GTAGCGGCAGCAGGC                CGGC GCTG GCCG                 TCTGTCAACTTATAT  50 96
        ectB NONE
CWR60_RS09655 NONE
        thpD 2028693 .. 2028712 + -12.1  -5.60993   TGCGTTTGGCTTGAG            CCCCGCG AACCCC CGCGGGG             TTTTTTTATGGCCCG 100 66
CWR60_RS09665 NONE
CWR60_RS09670 NONE
        pdxA NONE
CWR60_RS09680 2033512 .. 2033524 +  -6.9  -3.15544   TCCGCGCAGCGCCGA                GTGGC TGA GCCGC                TTCCTGGGGCTGCCG  52 434
CWR60_RS09700 2035585 .. 2035612 + -10.5  -2.55253   GGCCTGACGGCCGTT        GCGCGCGCGCCC GGCAA GGGCGC-CGCGG        TCACTTCCGATTCGT  57 34
CWR60_RS09705 2036704 .. 2036746 +  -7.7  -5.59357   CAGCGCGGGAACCCG GGGCGGCATCC--TCACACGC GGC GCGTGCAAATGGATACCGCCC TTTTTTTAATGTCAT 100 49
CWR60_RS09710 NONE
CWR60_RS09715 2039496 .. 2039514 + -17.4  -5.86332   AGGCGACGCTACAGA             CCCGGGCC GCT GGCCCGGG             TTTTTTTTGGGTTCA 100 47
CWR60_RS09720 2040882 .. 2040913 +  -3.4  -5.40072   CCCCTTGGGGGGCAG      CAAGCCCGCGCAGC GGGC GCAGCGTGGGGGCG       TTTTTTTGCCGCCGG  90 80
CWR60_RS09725 NONE
CWR60_RS09730 2042792 .. 2042812 +  -6.1  -2.57132   TCCGCGGGCCGGAAA           GCCG-GCC ATGAGG GGCGCGGC            CTTCTCGCGCAGGCA  46 15
CWR60_RS09735 NONE
CWR60_RS09740 2044339 .. 2044372 + -10.9  -3.01924   CCGGCTGGCGCCTTG     CCGC-CCGACGAGGCG GCC CGGCTCGATGGCGCGG     TGTTGCGCGCCCCTG  62 277
CWR60_RS09750 NONE
CWR60_RS09755 2047916 .. 2047936 +  -4.6  -2.64616   CGCGGCCCGTTCACG           GGGCAGCCG GAGC CGGC-GCCA            TGATCTGGCTGGCCA  42 2
CWR60_RS09760 2048763 .. 2048776 +  -8.1  -3.53012   GCTGATCCGCCGCAT               CGTCG CCAT CGACG                TTTGAGGAGCCGGGC  60 7
CWR60_RS09765 2049849 .. 2049868 + -11.4  -3.04792   CATCGACGTGGCGTT            CGTCGGCCG CGA CGGCCG-CG            TGTTGCGGCTGGTGC  65 186
        dusA 2053376 .. 2053395 +  -7.1  -3.96337   CATGATGTTCCTCCC            G-GGGCGC TGGGC GCGCCCAC            TTTGCTACTTTTTGC  66 508
CWR60_RS09800 NONE
CWR60_RS09805 2056563 .. 2056573 +  -3.2   -3.7614   GACTGGGCAGCTGGG                 CTGG AAG TCAG                 TTGTTCGTCCTGATT  56 2
CWR60_RS09810 2057604 .. 2057635 +  -9.4  -3.03243   CTAGTCCGCTGCCGG      GCGTTTCGCGGTGGG CGG CCCGCCG-GTAATGC      TCTTCGAAGATCCGT  55 174
CWR60_RS09820 2061917 .. 2061936 +   -10  -4.07568   CGGCAGTGTCATAAT            CGGGGTTG ACCG TAACCCCG             TTTTCGCGCGAAGCC  78 27
CWR60_RS09825 NONE
CWR60_RS09830 2063887 .. 2063935 +  -8.6  -2.62184   GCCAGGCCGCCAAAT AGGCCGCGCGTTCAGGCCGGGCT GACG GGCGCGGCCAG-GCGCGCGATCG TGGTGTCCAGCGGCC  52 24
        apbC NONE
CWR60_RS09855 NONE
CWR60_RS09860 NONE
CWR60_RS09865 NONE
CWR60_RS09870 2071632 .. 2071649 + -12.7  -3.29829   CGCTGCATGCGGGCA             CCGCACC ATCG GGTGCGG              TTGTCGGAAGCTATA  71 88
CWR60_RS09875 2071931 .. 2071945 +  -5.6  -3.13403   ACCACCCTCGTTTGA               TACCGG AGC CCGGCA               TGTTGCTGACCAAGA  49 26
CWR60_RS09880 NONE
CWR60_RS09885 NONE
CWR60_RS09890 NONE
CWR60_RS09895 NONE
CWR60_RS09900 2077364 .. 2077409 +  -8.2  -3.61398   TAAGTCCGGGCCGCA AG-CC-GCGCG-GCGCCCGCCGT CTC AGGCCGGGCGCGCGCGCCGGACC TTCTTGCGCGCGAAA  62 38
CWR60_RS09910 2079394 .. 2079405 +  -2.2  -3.12803   CACGCGCGGGGCATG                GCAT GACG GTGC                 TGTTCGATCTGCGTG  42 20
CWR60_RS09915 NONE
CWR60_RS09920 2081011 .. 2081031 + -16.9  -4.07687   AGCACGAAATCCAAA            GGCCACGAG TAT CTCGTGGCC            TTTTGCACGGGGCGT 100 121
        leuC NONE
        leuD 2083280 .. 2083316 +   -15  -3.37556   TGACGCGTTGCCTGC    CGGCCCGCTGTCCGCG TTGAT CGCGCGCGGCGGGCCC    TTGCCTTGTTTTCCC  80 38
        leuB 2084461 .. 2084501 + -17.7  -3.97602   TGCCGGGCGCGTCCA  TTGTGCGAAAGGGCCGCGA TTT TTGCGGCTTTTCCGCACAA  TTTGTCCCTATATTC 100 61
         asd 2085753 .. 2085809 + -11.8  -4.07568   CCTGACGCGCGGCGC CGGCGCGCATGGCAGGATACAAGGGCGCC CGCG GGCGCCCTTG--T-C-GC-AGGCGCGCCG TTTTCGGCGGCAAGG  82 36
CWR60_RS09945 NONE
        truA 2088498 .. 2088510 +  -4.7  -3.61398   TTTACGCAAACGGTC                CGCGC TCA GCGCA                TTCTTCCACACCCAG  52 130
CWR60_RS09955 2089621 .. 2089637 +  -6.5  -3.53012   ATGGCGACGGTGGCG              CGGGG CAAATAA CCCCG              TTTCGACGCGACGCG  56 14
CWR60_RS09960 NONE
CWR60_RS09965 NONE
CWR60_RS09970 NONE
CWR60_RS09975 2092959 .. 2092984 +  -9.7   -5.0925   AGCACCACCTTAAAA         GCCGCGTCAGTC TTT GACTT-CGCGGC         TTTTTGCTTTTGGCG  95 62
CWR60_RS10000 NONE
CWR60_RS10005 2098212 .. 2098236 + -12.7  -2.75064   GCTGAGGCCGGCAAA          GGCGGCGGCGC GCC GCGCCGCCGGA          TCCTTACATGGGCAG  65 36
        hemN 2100530 .. 2100562 +  -4.6  -4.24342   ATTCTCGCTCAGGTA      CAGGGCCAGCGCGA GGTCG TCGGCCAGGCCCAG      TTTCTTCATGGCGCG  66 459
        thrS NONE
CWR60_RS10035 2104178 .. 2104214 + -18.6  -3.05463   CAGGCTGATCCCATC    CCCGGCCCGGTTGCCC ATGAG GGGCGTCCGGGCCGGC    TTGCGTGCGGCCCGT  90 33
CWR60_RS10040 2105270 .. 2105283 +  -3.1  -2.87243   GCCGGCTGAACTTGC               TGCTA TGAC TGGCA                TCGTTATCGTCGTGC  41 32
CWR60_RS10045 NONE
CWR60_RS10050 2106074 .. 2106100 + -10.8  -2.62735   AAAACCTCAGGTTCC         GGCAGCCCGC CGTCGGC GCGGGCTGCA         TCGTCTACGCGCTCT  59 42
        ptsP 2107895 .. 2107912 + -14.1  -5.64006   GGTGGCACGGCAAAA             CGGCGCC TTGC GGCGCCG              TTTTTTTCGTTGCGT 100 47
CWR60_RS10070 NONE
CWR60_RS10075 2111058 .. 2111076 +   -16  -5.31275   GGGCGCGGCAATGCG             GGCAGGCC CAG GGCCTGCC             TTTTTTGTCGTCAAA 100 72
        ehuB NONE
        ehuC NONE
        ehuD NONE
CWR60_RS10095 2114393 .. 2114406 +  -8.1  -3.28712   CGACCAGGTTGCCCA               GCACG ATGC CGTGC                TTGTGGCCCAGGCCC  55 237
CWR60_RS10110 2117501 .. 2117516 +  -6.2  -5.17488   GTCTATGGCATCAAG              TTGCAT GGTT ATGCAA               TTTTATTTTGCTGTT  89 490
CWR60_RS10145 2124946 .. 2124969 + -15.2  -3.54475   AGCGCCTCTTTTTCT          GGCCGGCGGC GTAA GCCGGCGGCC           TTCTGTAATACCAGG  81 12
CWR60_RS10150 2126855 .. 2126865 +  -2.4  -4.06419   CAGGGTGTCAGCATA                 CAGG TAG CCGG                 TTCTTTGTAGCAAAA  58 432
CWR60_RS10160 NONE
CWR60_RS10165 2130580 .. 2130634 + -15.8  -2.61383   GCTGGACATCATCAC GGCCTGAGCTTCGCGTCTTGCGCCCGC ATCG GCTGGCGCAAGACGCG--GCA-GGGCC ATTCTCAATAGCGGT  74 19
CWR60_RS10200 2140014 .. 2140033 +  -7.1  -3.42354   AAGGTGTATTGGCCG            CTGGCCT TGGCCT GGGCCAG             TTCTGCCTTGACCTG  58 288
CWR60_RS10210 2141947 .. 2141968 + -14.4   -2.6155   CCGGGCCGCGCCGCG           GGGCCGCC TATAAT GGCGGCCC            GTTGGTCTTCCCAGG  69 45
CWR60_RS10215 2142279 .. 2142305 +  -7.9  -5.06816   GGCGCCATCTGACGC        ACTGAGCGCGCC ATCG GGCGCGC-CGGC         TTTTTCTTGGACAAT  88 21
CWR60_RS10220 2142866 .. 2142877 +  -2.2  -4.05004   AGTGCCGTGCCTTCT                C-CGG CGT CCGCG                TTATTGTTCTACTGC  58 246
CWR60_RS10225 2143178 .. 2143193 + -11.8  -4.93547   AGCGTGTCCATAAAA              GCCCCC GCCA GGGGGC               TTTTTCATTGCTTGG 100 48
CWR60_RS10230 2144041 .. 2144051 +  -3.2  -3.77808   GCGAGATCTTCAAGC                 GACG CGG TGTC                 TTGTGTTCTGGTCGC  56 261
CWR60_RS10235 2144410 .. 2144435 + -16.9  -5.06414   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 78
CWR60_RS10245 NONE
CWR60_RS10250 2147231 .. 2147257 + -14.4  -3.01924   TCGATAAGCGTTGAT         CGCGCCGGCC CTCATCC GGCTGGCGCG         TCTTCACCAGAGATA  72 78
        clpX 2148608 .. 2148642 + -19.6  -3.05819   GATCCCGGCCGCCAT     TGCAAGAAAACCCGTT TGT AACGGGTTTTTTTGCA     TCTTCCCGCTATCTG 100 46
CWR60_RS10260 2151270 .. 2151294 + -22.9  -5.79526   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTTCGGCTAT 100 66
CWR60_RS10270 2153775 .. 2153791 +  -7.2  -4.21827   TGAGCCCGCGCGCCA              TCGCCG CGATC CGGCGG              TTTTCCCGTGTTTCA  72 38
CWR60_RS10275 2154775 .. 2154795 +  -2.4  -3.16564   GGTGCCGTTGGCCAA            GTCGCTCG GCGTA CGGGCGGA            TTGATGCCATGAAAA  42 1
CWR60_RS10280 2155244 .. 2155257 +  -2.3   -2.6563   GGCGATGGTGGCCGA               GTGGC TGAT GCAAC                TGCGTTATTGAGCGC  38 1
CWR60_RS10285 NONE
CWR60_RS10290 NONE
CWR60_RS10295 NONE
CWR60_RS10300 NONE
CWR60_RS10305 2159839 .. 2159849 +  -8.2  -3.32963   TTGCCCTTGTTCACG                 GCGC TGG GCGC                 TTATGCGGTGCCGCT  58 239
CWR60_RS10315 NONE
CWR60_RS10320 NONE
CWR60_RS10325 2163009 .. 2163025 + -13.7  -3.65812   GAGCCTCCAGCGCGG              CGTGGCC GGC GGCCACG              TTGTATTGCCCCACC  80 47
CWR60_RS10330 2164961 .. 2164987 + -25.2  -5.75342   AGATGCGTCGTGCCG         CCGCGCGCCGGA ACA TCCGGCGCGCGG         TTTTTTTTGCCGCCG 100 44
        uvrB 2169480 .. 2169506 +  -7.2  -3.10715   ACAAACAGGCTGGCG         CGTTCTTGCGGC ATA GCGGCAAAAGCG         TTACATACTCGTCGC  52 91
CWR60_RS10350 2170238 .. 2170253 + -11.8  -5.24129   CCCAAAATGAGAAAA              CCGCGC GACT GCGCGG               TTTTTTCTGACCGAG 100 96
        iscR NONE
CWR60_RS10360 NONE
        iscU NONE
        iscA NONE
        hscB 2173464 .. 2173484 +  -2.4  -3.32844   GGCGGCCGGCCCGAT            GCGCGGCA ACCGA TGACCCGC            TTGTGCGGTGCCGCG  44 81
        hscA NONE
         fdx NONE
        iscX 2175970 .. 2176004 + -25.8  -3.53012   GCCGGCGCGGCACCC     GGGCAAGGGCCCCGTC ATC GACGGGGCCCTTGCCG     TTTCGGGGCCGCGCG 100 50
CWR60_RS10395 2177063 .. 2177085 + -17.7  -3.21416   AAGTCGGCGCGTCCG           GCCGCCGCC AGGAA GGCGGCGGC           TTCATCCTCGAGCTG  85 123
CWR60_RS10405 2178882 .. 2178904 +  -5.5  -3.72324   CGCCGCCTGGCGGCG          CA-GGCGGCC TGAT GGACGCCCTG           TTCTTCCTGGAGGTG  57 14
CWR60_RS10410 NONE
CWR60_RS10415 NONE
CWR60_RS10420 NONE
CWR60_RS10425 2182829 .. 2182843 +  -3.5  -2.78384   TCAAGCACTACAAGC              GCC-GC AAGC GCTGGC               TGTCATGACGCGCGC  41 3
CWR60_RS10430 2184744 .. 2184757 +  -5.2  -3.12327   AGGTGGCGGTGCGTA               CCGG CGCGGT CCGG                TGTTGCGTATCCAGC  49 56
CWR60_RS10435 2185910 .. 2185947 +  -7.6  -2.73364   CGAGCGCGCGGATGT   AGTCGGCGTCGAAGTA CATGGC TTCTTCGTCGCCGGCG    TCCTTGGCCTCGACC  49 511
CWR60_RS10470 NONE
        lolD NONE
CWR60_RS10480 2194965 .. 2194995 +  -2.8  -3.97446   TTACAGTTTGTCTGT      TA-GTCGAAATTT ATTAAC AAATTTCGGCATA       TTTGAATTTATTTGT  58 200
CWR60_RS10485 2198386 .. 2198410 + -12.8  -6.23209   TCCGCCCGTTGTTGG          CCGCCTGTCG TGTAT CGACTGGCGG          TTTTTTTTTGGTTCA 100 109
CWR60_RS10495 2200701 .. 2200759 +  -9.6  -2.79796   TGGCGGGCTAGCGTC GATGGC-GTACG-GCAGTGTGCCTGTCCC CGCG GGGACAGGCACAC-GCACGGGCAGGCGCC TGTCGTGGCGTCAGG  55 137
CWR60_RS10525 2208304 .. 2208325 + -15.1  -3.01712   GGCCTGTTCTTCCAT           GGCCGTGGC CGCC GCCGCGGCC            TGTTCGACCAGCGCG  74 197
        greA 2211308 .. 2211322 + -11.4  -2.91274   TAGCGGTCAATGAAG               GGCTGC AAG GCAGCC               TGTCGTTCGGCTGAG  61 433
CWR60_RS10550 2213573 .. 2213588 +  -4.6  -3.14132   CAACTTGTAACGGTT              GGCTGG CCAT CCACCC               TTCATCCCACGGCGC  47 53
CWR60_RS10555 2215666 .. 2215682 +  -2.2   -2.8372   TACGGCGGCCGCGGT              CTGAGC CTGCT GCTAAG              GTTTCATGGCAAATA  40 22
        folP NONE
CWR60_RS10565 2217908 .. 2217927 + -16.4  -5.06414   CCGGACCTGCCCGAA            GGCCCGCC TGAT GGCGGGCC             TTTTTGTTGCGCGGG 100 48
CWR60_RS10570 2219020 .. 2219047 + -21.4  -3.48276   TGGACTGAGCTGACG        GGTGCCTGTCCC CGCG GGGACAGGCACC         TTGTATCGGGACAGG 100 145
        ppk1 2222948 .. 2222967 +   -15  -5.09259   CGGCCCGCCGCCGCC            TGGCCGCC CGCG GGCGGCCA             TTTTATTTTGAAATA 100 43
        pstS 2224208 .. 2224229 + -10.1  -2.52464   CCTGGCCGGACCAGT           GAACGGCGA GCGA TCGCCGTCC            TGACTTCGCGGGGCG  56 68
        pstC NONE
        pstA NONE
        pstB 2227000 .. 2227034 +  -7.7  -3.49858   CGGAAGACTACATCA    CCGGCCGCTTCGGCTG AGGC CGGCCGGCG-GGCCGA     TTCTGGTATAGTTGC  60 9
CWR60_RS10605 2227228 .. 2227268 + -14.8  -3.87075   TAGCCGCTCCATGCA TGCCAAAGCCCCGATACGG ATTT CCG-GTCGGGGCTTTCGCG  TTTCTGCGGGGTGCT  87 120
CWR60_RS10620 NONE
CWR60_RS10625 NONE
CWR60_RS10630 2232194 .. 2232207 +  -2.3  -4.07568   AGGATCCGCAACGCG               CCGTC GTCG GACAG                TTTTGCCAGGACGGG  58 98
CWR60_RS10645 NONE
CWR60_RS10650 2236903 .. 2236920 +  -2.6  -4.69664   CCTGCGCCGATTGAA             CGCAGC CTGAGC GCTGCA              TTTTTGACTGGTATG  70 82
CWR60_RS10655 2237415 .. 2237441 + -20.8  -3.21099   CTAGCTTTCGCAAGG         GCGGGCGGCCCC GTG GGCGCCGCCCGC         TTCCTCCTGGAAAAC 100 37
CWR60_RS10660 2238366 .. 2238393 +    -4  -3.15638   CAGCCCCGGCCATCG        GTCGGGCGCTGCG GGC CTCAGTGCC-GCC        TTGAATATAACTTTT  45 171
CWR60_RS10665 NONE
CWR60_RS10670 NONE
CWR60_RS10675 NONE
CWR60_RS10680 2241971 .. 2242009 +  -4.5   -3.6682   CCGCCTTTTTCCCTT  CATC-GCCAAGCACACGGC TGC GCCGCG-GCTTGCCTGCTG  TTTCACTCCATCCCC  55 41
CWR60_RS10685 2243498 .. 2243510 +  -4.7  -2.97667   TCGACGACCACCGGC                GCCAG GCC CAGGC                TCATTTCGTCGATCA  46 258
CWR60_RS10715 NONE
CWR60_RS10720 2250194 .. 2250206 +  -6.3  -2.52896   TTGGTGAGCAAATTG                TTCAC ATG GTGAA                TAAATTGCCAAGTCG  45 51
CWR60_RS10725 2251045 .. 2251073 +  -5.2  -3.55622   GCGGCGGCCGCTATG       GCTG-ATGGGGCG CCGC CGCCGCATCCCGC        TTTCCGACGATTCCA  54 21
CWR60_RS10730 2252087 .. 2252114 +  -6.2  -3.69395   CGTCTCGTTCGACAA        CTGA-CGCGGCGG CGC CAGCCGCGCTCAA        TTATTCAATGATGGA  59 22
CWR60_RS10735 NONE
CWR60_RS10740 NONE
CWR60_RS10745 2255771 .. 2255786 +    -4  -3.27498   ATGATCTTGCATGTA              TGATTG CATT CAATCG               TTCATATGAAATATC  47 370
CWR60_RS10750 NONE
CWR60_RS10755 2257854 .. 2257873 +  -3.4  -2.79004   GCAACTCAAGGCCCA            GGGAGCTG CAGC CTGATCCC             CTGTTTTCCGCATGA  40 10
CWR60_RS10760 2259191 .. 2259208 +  -4.1  -4.63932   CGGCGCAACGCTGAT             GTAGTCGC ACG GCGAC-GC             TTTTCTTCAAGGATG  73 22
CWR60_RS10765 NONE
CWR60_RS10770 NONE
CWR60_RS10775 NONE
CWR60_RS10780 2262485 .. 2262500 +  -4.6  -4.82901   GCCGCTTCCAACCAA              GACTCG TGAA CGAGGC               TTTTTCTACCCAAGG  79 17
CWR60_RS10785 2263890 .. 2263931 + -21.5  -3.37236   GGCCTGTTGCATGAC GCGCCCGGCAACCCGCCGC CGAT GCGGCGGGTTGCCGCTCCC  TTCTCCAGTTGGATT 100 43
CWR60_RS10790 2265398 .. 2265418 +  -3.3  -4.07687   AGATTGCATAAATTA            TTGGCTATA ATC TATGGCGAA            TTTTCAGGCAACAAT  59 77
CWR60_RS10795 2266606 .. 2266629 +    -3  -4.08945   TGTCGTCGGGGTCGG          CCCAGCGGCCC AGC GGGAC-CTGGC          TTTTCAGGAAGTCGT  59 507
CWR60_RS10850 NONE
CWR60_RS10855 NONE
CWR60_RS10860 NONE
CWR60_RS10865 NONE
CWR60_RS10870 2280368 .. 2280392 +  -3.5  -3.07043   GCGTCCTGGCGCGGG         CCCGCGAGGT GACGGA ACC-CGGGGG          TGTTGGCATAATCCG  44 43
CWR60_RS10875 2281232 .. 2281257 +  -5.3   -3.1855   GCGGCGCCGAAGGCC         ACGCCCAGGCGG TAG CCG-CTGAGCGA         TTCGGTCTTGGACGG  47 478
CWR60_RS10920 NONE
CWR60_RS10925 2290511 .. 2290524 +  -3.1  -3.73775   TGTGGGAATATGCTC               TGCGCG ATA CG-GCA               TTTCGTGCCGGTCGG  53 106
CWR60_RS10930 2292387 .. 2292413 + -14.4  -3.25073   GGTCGGCGCGGAAGC         TGCGCTCGCTGC TGC GCAGCAGGCGCA         TGTTGCTCTTGAGCA  75 45
CWR60_RS10940 NONE
CWR60_RS10945 2295542 .. 2295564 + -14.1  -3.68222   TGGGCGAATTCCGCC           TGCCGCGGC GCTGA GCCGCGGCG           TTCTTCACCTTGGCC  80 12
CWR60_RS10955 2297820 .. 2297856 + -12.8  -3.63515   CGCGACGCGCCGACC    CCGGCGCCGTCGTGGC GCTGA GCCGCGCCGTCGCCGC    TTCTTCCGACTCCGA  77 5
CWR60_RS10960 2298890 .. 2298924 + -17.1  -4.91977   GCGCGCGGAATAAGG    CGCCAGGCGGCGCGGC CCTG GCCGCGCCGCC-GCTG     TTTTCTCTTTTCGTG 100 28
CWR60_RS10965 2301775 .. 2301802 +  -5.5  -3.32984   CGATGCCGGTGCAGC        TCGCCGTTC-GG CCCCA CCAGCACGGCGG        TGTTGTAGATTTTCG  49 513
CWR60_RS11005 2307706 .. 2307744 +  -2.3  -3.26141   CGGCCAACCGTTAGG  GCG-CGCGATACAGGCTG CGCG CGGTATGTAACGCGACGA   TAGTTTTGTATTCAC  44 27
CWR60_RS11010 2309460 .. 2309482 +    -9  -2.81547   CGCCCAGCGCGACCA           CGGCCGCGTA GTG TTCGCCGCCG           TCCTTCCTGTAGCGC  52 359
CWR60_RS11025 2312645 .. 2312661 + -11.5  -2.77013   GAACGCCTGGGCTGA              GCGCGGC GAT GCTGCGC              CTTGTTACCGACATC  62 26
CWR60_RS11030 NONE
CWR60_RS11035 2313155 .. 2313174 +  -4.2  -4.00042   GACTACCCCGATACC            GGCCGT-TG AAC CGCGCGGCC            TTATTTGCTGCGCAC  59 17
CWR60_RS11045 2315123 .. 2315136 +  -3.7  -4.07568   CATAGCCGGCATAGT               CGGCG TAGT CGCGG                TTTTCGCGCGCCACG  60 295
CWR60_RS11060 2318099 .. 2318127 + -16.9  -5.47399   CGGCCAGACCGGAAA        TCCCATGCAGATC ACT GATTTGCATGGGA        TTTTTTTGCGCTTCG 100 59
CWR60_RS11065 2321238 .. 2321296 + -29.8  -3.25072   TTTCATCCCCTGTCC TGAAGC-CGGCCATCCGGCCG-CCGCGGC GCAA GCCGCGGGCGGCCGGATGGCCGCGCC-CA TTCCGTTCTCCTCCC 100 49
CWR60_RS11070 NONE
        accB NONE
CWR60_RS11080 2324772 .. 2324792 +  -3.9  -2.93853   AACACATTTCGTTCA            CGCGACC CTGAGCC GGTCCCG            GTTTCGTTGCCACGG  43 15
CWR60_RS11085 NONE
CWR60_RS11090 NONE
CWR60_RS11095 NONE
CWR60_RS11100 NONE
        accC NONE
CWR60_RS11110 NONE
CWR60_RS11115 NONE
CWR60_RS11120 2332307 .. 2332353 + -10.6  -2.62184   TTCGCCGCGCGCGCG CGTCAGCTTCACCCGCCGCGTC ACC GACGAGGCGGGCCATGTCGGCG TGGTCTGCCAGAGCG  59 458
CWR60_RS11130 NONE
CWR60_RS11135 NONE
CWR60_RS11140 2336367 .. 2336377 +  -2.4  -3.09516   GATCGGCCTGCCGCG                 CGCC ATG GGCA                 TTCCGTGGTAGGGCG  42 4
CWR60_RS11145 2337673 .. 2337701 +  -6.5  -2.53263   ATTCCCGCGGCGGGC        TTGCGCCGCAGGC GGC GCGCGCGGCACGA        TCGCTTCCACGTCGC  45 59
CWR60_RS11150 NONE
CWR60_RS11155 NONE
        hpaH 2340362 .. 2340402 +  -5.4  -3.05384   GGCGCGGCCGAGCGT TGCG-CGC-TTGGGCTAGAC TGT GTCCAGACCGGCGCGGCGCA TTCCATCGCAGCCGA  47 70
CWR60_RS11165 2341445 .. 2341499 + -14.1  -2.63631   GCCTCGATGAACTAA TGCGAGCCGTCGCGCGCGGCGCGCGGC ATG GCCGGGCGCCGC-CGCT-CGGCCAGGA TGCTGTACAGATTGC  69 26
CWR60_RS11175 NONE
CWR60_RS11180 NONE
CWR60_RS11185 NONE
CWR60_RS11190 NONE
CWR60_RS11195 2346577 .. 2346602 +  -8.2  -3.41125   CCGGCCGGCAATGGC         CGGC-CGAGGG GTGGA CCCGCGTGCCG         TTCTGGGTCTATACC  60 87
CWR60_RS11210 NONE
CWR60_RS11215 NONE
CWR60_RS11220 NONE
CWR60_RS11225 NONE
CWR60_RS11230 2353589 .. 2353618 +  -8.6  -3.30441   ACCTGGTTGACGTGG       CC-CGGCGTGAGC ACGAA GTTCATGCCGCGG       TTGTGCAGGCTGATG  59 464
CWR60_RS11245 2356645 .. 2356655 +  -4.6  -3.28924   GGATCGCGCTGACAC                 CCTG TGC CGGG                 TTGTCCCCAGCGGTA  49 51
CWR60_RS11250 2358019 .. 2358055 +    -5  -3.05384   GCGGCCTGAGTCAAT   CGGCCGCGGGAACC-GCG AAG CGCAGGTAGGCG-GGCCG   TTCGCTGCCGACCGA  45 32
CWR60_RS11280 2363476 .. 2363530 +  -5.6  -3.04144   CGGAAAGACCAGCAG GTCGGCCGTCACCGGTTCCCTGTTGT CGA ATAACAGGTAATGCGTGGCGTCCGGA TATTCGCCGTGGCGC  47 52
CWR60_RS11285 2364313 .. 2364370 +  -8.5   -3.0263   ACCGCGCCGTCTCCG CGCGCGCTGAGCGC-CTCCAG-GCGACT GCGCA GGTCGCGTTCGTGAGCGTTCAGC-CGCG TATTGACCGCCTGGT  55 204
CWR60_RS11330 NONE
CWR60_RS11335 NONE
CWR60_RS11340 NONE
CWR60_RS11345 NONE
CWR60_RS11350 NONE
CWR60_RS11355 2374703 .. 2374715 +  -3.3  -2.53263   TTTCAGTTTCACATC                CGGAG TAA CTCCA                TGCATTCAGACTCAG  39 18
CWR60_RS11360 NONE
CWR60_RS11365 NONE
CWR60_RS11370 NONE
CWR60_RS11375 NONE
CWR60_RS11380 NONE
CWR60_RS11385 NONE
CWR60_RS11390 NONE
CWR60_RS11395 NONE
CWR60_RS11400 NONE
CWR60_RS11405 NONE
CWR60_RS11410 NONE
CWR60_RS11415 NONE
CWR60_RS11420 NONE
CWR60_RS11425 NONE
CWR60_RS11430 2386342 .. 2386356 +  -6.4  -3.61398   AAGCAGTGCGGCAGC               CTCTTC ATA GGAGAG               TTCTTCCACGCCGAC  56 161
CWR60_RS11445 2389215 .. 2389238 +  -4.4  -4.18908   ATGCCGGCAGCGCGC          GGTGCTGTCC TAGG GGCCGGCACA           TTCTTTTCCAGGTCT  66 13
CWR60_RS11465 2395424 .. 2395440 +  -5.1  -2.78463   GCGCCGGCAGGCAGG              TTCTGCG TCG CGCACAA              TGTGCTGCGCAAGGT  43 398
CWR60_RS11480 2397547 .. 2397557 +  -2.4  -3.61398   TCATGGCGTAGTTGA                 CCAG GCG CAGG                 TTGTTCGAGCCCGGA  50 354
CWR60_RS11490 2398927 .. 2398952 + -11.1   -5.4505   ATTCGTTGGAAAACA         GGCACTTAGGC GCAA GCCGAGGTGCC          TTTTTTCTTGGGCGA 100 46
CWR60_RS11495 2400148 .. 2400159 +  -2.2  -3.38046   GCAAGTTTTCGTATT                CTTG ACGG CAGG                 TATTTGCCATCAGGA  46 55
CWR60_RS11500 2401649 .. 2401666 +  -4.9  -3.32963   GGGGGCCGGCGGCGC             GTGGTTCG ACA CGAAC-AC             TTATGACGTGGGCCT  49 269
CWR60_RS11510 2404139 .. 2404154 +  -4.6  -3.06831   GCGAAGGCGAAGTCG              GCGGTG TGCC CGCTGC               TTCCCTGCGCCTTGG  46 378
CWR60_RS11530 NONE
CWR60_RS11535 NONE
CWR60_RS11540 NONE
        bamC 2409735 .. 2409758 + -18.2  -5.81412   AGCGGCACAAAAAAA          CCGGCAAGCC GCAA GGCTTGCCGG           TTTTTTTTGGCTGGC 100 66
CWR60_RS11570 2415384 .. 2415412 + -20.3  -3.61398   ACGACTGATGCCGGC        CTGCGCGGCGCGC GGC GCGCGTTGCGCAG        TTGTTGCACACGCAG 100 33
CWR60_RS11580 NONE
CWR60_RS11585 NONE
CWR60_RS11590 2420164 .. 2420178 +  -4.2  -3.14931   CGTTTGGAGTGTTTG               GCCATG CTG CATGGA               TTGATACCGCATCGC  45 52
CWR60_RS11595 NONE
CWR60_RS11600 2422355 .. 2422393 + -23.8  -2.80443   TACGCGGCCTAGTCC   TGCGGCCCGGCGCGTGCG TCA TGGGCGCGCCGGGCCGCG   TCTGATAGAGTCTGC 100 29
CWR60_RS11605 2423455 .. 2423501 +  -8.6  -4.18018   CCACGCCCAGCGCGC CGCGCAC-CGCGTGGTTGCCC ACCACC GAGTAGCCGCGCGCGCGCGTG TTTTCGATCAGACGG  75 190
CWR60_RS11615 2425237 .. 2425254 + -12.7  -4.19735   CTCGAGCGTGAAGAA             GACGCCC GCGA GGGCGTC              TTTGCTTTTGGAGCC  91 53
CWR60_RS11625 2427088 .. 2427141 + -19.3  -2.82505   GCTGGATGCGCGGTC GCCGGGCCGCGCCGGCGCAGGCGCG GCCG CGCGCCGTCACCGGCGTGTCATGGC ATTTCCATGTACGAT  95 82
CWR60_RS11630 NONE
CWR60_RS11635 2429665 .. 2429690 + -19.1  -4.56597   ACGCCAAATGAAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 30
CWR60_RS11655 NONE
CWR60_RS11660 NONE
CWR60_RS11665 NONE
        tilS 2436422 .. 2436444 +    -9  -3.28924   AAAATACTCAGCTTT           GCCCGCCCAG ACC CTATGCGGGC           TTGTCAGCCAGAGTA  61 83
CWR60_RS11675 2437729 .. 2437753 +  -2.1  -3.01712   GGGCGATCAGGTCTA          GGAAAAGATCG GCA CGATTTTTCGC          TGTTCGGGGCAGGGC  41 25
CWR60_RS11680 2437918 .. 2437939 + -14.5  -5.45802   GCCAAAGATCAAAAA           GGCCCTTGA GCAA TCAAGGGCC            TTTTTCTTTTGCGGC 100 37
CWR60_RS11685 NONE
CWR60_RS11690 NONE
CWR60_RS11695 NONE
CWR60_RS11700 NONE
CWR60_RS11705 NONE
CWR60_RS11710 NONE
CWR60_RS11715 NONE
CWR60_RS11720 NONE
CWR60_RS11725 NONE
CWR60_RS11730 2446449 .. 2446459 +  -2.4  -2.66316   TTCATTGAGCGTGGA                 CACC GAC GGGG                 TGATGTCGTGCACCA  38 477
CWR60_RS11740 2448574 .. 2448616 + -12.6  -3.25073   CACAGCGGCGGCTAT CCCGCGCGCCAGGCGCTCG AACAGG CG-GCGCCTGGCCGGCCGG TGTTCCTGTTGCGCC  71 408
CWR60_RS11750 2450660 .. 2450682 +  -3.3  -3.20227   GTGCCGTCGCTGTTC           GGTGCGC CATGAGCGT GCGCCCC           TCTTGGTGGTTCGCC  44 14
CWR60_RS11755 NONE
CWR60_RS11760 2452571 .. 2452587 +  -9.4  -4.11484   CTGATCCGTCCCTTG              CAGGCG GGCAG CGCCTG              TTTTACAACCTTGCA  75 37
CWR60_RS11765 2452766 .. 2452793 + -18.6  -5.04385   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC 100 82
CWR60_RS11810 NONE
CWR60_RS11815 2461394 .. 2461426 +  -8.4  -3.19157   GCGTCCGTCGGGTTG     CCG-CTGCATGG-GCG GCC CGCTCCAGGCGGCCGG     TTCGTCCGCTTCGTC  56 87
CWR60_RS11840 2467754 .. 2467767 +  -9.5  -3.53091   CCTGTATCGCCGCAC               CCGCC GCCG GGCGG                TTTGAAAAGCCGGCT  64 7
CWR60_RS11845 2467910 .. 2467934 + -17.2  -4.98531   GCGCCAATATGAAAA          GCCGCCATGC CTTGT GCATGGCGGC          TTTTTGCTTTGGGCG 100 35
CWR60_RS11850 2468582 .. 2468597 +    -9  -3.14344   ACGCCGACGATCTTG              TCGGAC GGCA GTCCGA               TTCCTAGGGAAAATA  59 3
CWR60_RS11855 2470156 .. 2470194 + -10.2  -2.96873   CGTCCGTGTCGCGGA  CGCGCCGTCGCGGGCGG GATGCA TCGCC-GCGGCGATGCG   TGATTTCCTAGAGGT  60 54
CWR60_RS11860 NONE
CWR60_RS11865 NONE
CWR60_RS11870 2473816 .. 2473843 + -17.8  -3.01924   CTTGACCGCCAAGAC        GGTGTCTGTCCC GGTT GGGACAGGCACC         TGTTGCGGGCGGCTC  86 133
CWR60_RS11895 NONE
CWR60_RS11905 NONE
CWR60_RS11910 NONE
CWR60_RS11915 2485979 .. 2485991 +  -3.3  -3.22102   CCGCGCCGCAGGCAC                ACCAC CTC GTGGG                TCTTGTCGGCGATGT  45 109
CWR60_RS11930 NONE
CWR60_RS11935 2491630 .. 2491640 +  -3.2  -3.65046   TGAACCCCGAGACCA                 GGAT CAT GTCC                 TTCTTGCGGTCGACC  51 346
CWR60_RS11985 NONE
CWR60_RS11990 NONE
CWR60_RS11995 NONE
CWR60_RS12000 2510972 .. 2510986 +  -3.4  -3.96051   GCGCGGCATCATCAA               CGAGGC TAC GCCATG               TTTCATCTGTTCTGT  58 131
CWR60_RS12005 2512018 .. 2512046 + -15.2  -3.53012   GGACGCAACCATCCC        GCTTGCCCGGCC CCGGC GGCCGGGCGCGC        TTTCCGGAGCAGGCG  81 41
CWR60_RS12045 2520936 .. 2520948 + -10.5  -3.01712   AAGCGGCTCGACGAG                GCCGC CGC GCGGC                TGTTCCAGGCGCCGG  59 198
CWR60_RS12060 NONE
CWR60_RS12065 2525650 .. 2525669 +  -4.2    -3.889   ATACGGGCATCCCGG            GGTATGGCG GCT CGCCG-GCC            TTTGCTATCCTTGCG  57 62
CWR60_RS12070 NONE
CWR60_RS12075 NONE
CWR60_RS12080 NONE
CWR60_RS12085 2532067 .. 2532121 +  -6.3  -2.71364   GGGGCGGAGAACGCG TAGA-GAGGGATGCGGTGCCTGTCCC CGTG GGGACAGGCACCGTGCCAACCGTCAA TCGTTGACGAAGTCC  47 23
CWR60_RS12105 2537717 .. 2537737 +  -6.1  -3.18582   GGCGGGATGCAAGCG            TGGCGTC GCGGTTG GACGCCG            TTGATGAGTGAAGTC  51 61
CWR60_RS12110 NONE
CWR60_RS12115 NONE
CWR60_RS12120 2538958 .. 2538974 +    -3  -2.78679   CGGGCGAGGGGGCCT              GAGATG CGCGC CATTTC              CTTTCCGTCCCGGCG  40 24
CWR60_RS12125 NONE
        cpaB 2540355 .. 2540369 +  -3.5  -3.01791   GTGCGCGGCGGCGAC               GTGCA GGCAG TGCGC               TATTGACGAACAGCT  44 5
CWR60_RS12135 NONE
CWR60_RS12140 NONE
CWR60_RS12145 NONE
CWR60_RS12150 NONE
CWR60_RS12155 NONE
CWR60_RS12160 NONE
CWR60_RS12165 2547669 .. 2547682 +  -3.7  -2.91383   GCTCGGGCGGCGGCG               GGGGC TGAG GCGCC                TGTGTCCATGAACGT  43 18
CWR60_RS12170 NONE
CWR60_RS12175 NONE
CWR60_RS12180 2552170 .. 2552185 +  -3.2  -3.83318   GTATGGCGGGGCGGG              GCATAG GCGG CTACGC               TTGTATTATTGCCGG  56 74
CWR60_RS12185 NONE
CWR60_RS12190 2553518 .. 2553544 + -11.5  -3.64703   GGTCCGGCGCCGGTT        CGCCGGCGCCGC GGCC GCGG-GCCGGCA         TTTCCGTCCAGCCCG  75 105
CWR60_RS12195 2554130 .. 2554142 +  -2.6  -3.29471   GCTGGGCGAGCCCCC                GGTC CCTTC GGCC                TTCGTATCATGAACG  44 1
CWR60_RS12200 2554678 .. 2554697 + -16.4  -3.75629   CCGGCGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG  88 142
CWR60_RS12220 2558990 .. 2559002 +  -7.7  -2.71144   GCCTTCCAGGCCCGT                GACGT CGA ACGTC                TCGTTGCCCACGATG  49 311
CWR60_RS12235 2565070 .. 2565099 +  -5.5  -3.14211   ACCGTCGTCGATTGG       CGCGGCAGCATCG CGGA CGAGGTCGCCGCA        TTCCTCAAGCGCCAT  49 256
CWR60_RS12260 NONE
CWR60_RS12265 2571099 .. 2571118 +  -9.2  -2.72344   GCGCGCATGAACAGC            GGCCTGGC CTGC GCCACGCC             TGCTTCGAAATCGGC  52 243
CWR60_RS12275 2571595 .. 2571613 +  -4.4  -3.66018   GGGCGAACAGGCCAG             CCAGCCGG TGC CCGACTGA             TTCTTCCCATCCTCC  55 7
CWR60_RS12280 NONE
CWR60_RS12285 2573672 .. 2573718 +  -7.2  -3.55444   ACAAAGGGGAGCCAG GCGGCGG-TC-CGCCTGCCGGT CGGAA ATCGGCGAGCGTGTTCCGTCGC TTTACGGAATCGGAG  58 339
CWR60_RS12290 NONE
CWR60_RS12295 2574928 .. 2574945 +  -8.3  -3.33696   GGGCGGCGCCATGTC             CAGGCCG GCCT CGGCCAG              TTGCTTCAGGACGCG  59 141
CWR60_RS12310 2580113 .. 2580146 + -15.9  -2.70932   GCGCGCGGCCGCGGC     CGACGTGGCCGGCGC CGGC GCGTCCGCCTCGTCG      TCCTTGAAGCGGCGC  75 93
CWR60_RS12325 2582722 .. 2582778 +  -7.2  -4.64334   GCAAGGCGCGCGCGG CCCT-GTCCACGCGCGGCGGCCCC-CC GCGCAA GGCGGGGCAGCCGC-CGCCAACCAGGG TTTTGTTGCGGCGTT  79 173
CWR60_RS12330 NONE
CWR60_RS12335 NONE
CWR60_RS12340 2585333 .. 2585371 +  -5.3  -4.07568   CCAGGAAGGCGAGAG   AGCAACGCTTAGTGCTG CGAGT CAGTGTTAAGCGTTGGG   TTTTGGCCCGACAGC  64 80
CWR60_RS12345 2588589 .. 2588599 +  -6.8  -3.65314   AACCGACTGCCAGGC                 GCAC GCT GTGC                 TTCTTCCAGATTCAA  61 127
         rrf 2588774 .. 2588808 + -19.5  -4.56597   CAGGCTTTTATTGCT    CAAAACCCCGC-AGCC TCAT GGCTCGCGGGGTTTTG     TTTTTGGGGGGACGC 100 36
CWR60_RS12355 2592032 .. 2592085 + -10.2  -3.72576   CAGCTGGTGACCGCG CCGCCGGCGT-C-GCTCAGGGCACGGC GAT GCCG-GCGCTGCGCAGCAGGGCGGCGG TTTCGTAGAGGGGCA  70 31
CWR60_RS12395 2599053 .. 2599075 +    -9  -3.03441   CCAGGGTGCGGGCAA           AGCGCGCGAC CAT GTCGCGCACC           TGTTCGGCGGTGATG  55 142
CWR60_RS12405 2601816 .. 2601874 + -15.8   -3.6106   TATGTAGTAGCCGCC GCTGTCGGCGCGCACGCGCTCG-CCGC CCATGC GCAGCCGCGCGCCTTCGCGCCGGCCGC TTTCGACATATTCCA  85 396
CWR60_RS12460 2615000 .. 2615048 +    -8  -3.67296   CTGAACGCCGAGGCC TGGAGCG-GCGCCTGA-CGCCGGC TAG GCCCGCGCTTGGCCGCGCGCGCCG TTTGGATCGATAATG  63 11
CWR60_RS12465 2616210 .. 2616248 +  -8.7  -3.03159   GGCCTGGCGCTCAGT  GCGC-GCCGGCCGC-CGCC TCG GCCGCGCCGCCGCCCGCGC  TCTTGGCGGACTTGG  55 49
CWR60_RS12495 NONE
CWR60_RS12500 2624047 .. 2624066 + -16.4  -4.18018   TTGGCCCATGCAAAA            CGCGCCCC TTGC GGGGCGCG             TTTTCGCTGGCGGAC 100 54
CWR60_RS12510 NONE
CWR60_RS12515 2627340 .. 2627354 +    -7  -3.01924   GCGGTAATCAGGTGC               GGGCCG GCG CCGCCC               TGTTCGGCCAGCGTC  52 478
CWR60_RS12530 NONE
CWR60_RS12535 NONE
CWR60_RS12540 NONE
CWR60_RS12545 2633269 .. 2633299 +  -7.5  -4.07568   GTAATCCCGCATCGG      CGG-CGGGCT-CCGC ACG GCGGCGGCCCGTCCA      TTTTCCCGGAAGCAG  69 37
CWR60_RS12550 2634526 .. 2634541 +  -8.2  -3.18383   CGGCCAGGCGTTCGG              CGCGTC GCCA GGCGCG               TTGATGCATGGCGCT  56 102
CWR60_RS12565 2638567 .. 2638581 +  -2.7  -3.70902   GCTCGGCGATCTCGT               CGTCC TCGAT GGCCG               TTTCCATGTAGGCGG  53 239
CWR60_RS12585 2642853 .. 2642900 +    -4  -2.95223   GCGCCAGGCGGCGGC GCGCC-TT-GCGGGCGGGGCCG GTTGAG CGGCGCGGCGCGCGAACGGGGC TATCTCGTACAATTC  44 1
CWR60_RS12590 NONE
CWR60_RS12595 NONE
CWR60_RS12600 2646209 .. 2646225 +  -2.2  -3.13522   GCCCGTGACAGGTAA              GGCGAA ATGAA TTCTCC              TATTGATCCCGCGAT  42 176
CWR60_RS12605 2647177 .. 2647190 +  -2.3  -3.09933   CGGCGGGCTATCCCT               TGCCG GGGC CAGCA                TTGCATGGCTTGCCG  42 190
CWR60_RS12610 2647616 .. 2647630 +  -7.1  -2.70932   GCGGCCGAGTAACAG               GGCTC AGACA GAGCC               TGGTTGGCAGACCCA  48 29
        priB NONE
        rpsR NONE
CWR60_RS12625 2648843 .. 2648858 + -10.4  -6.23209   CATGCCTGAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTTGGTTCA 100 49
CWR60_RS12630 2650206 .. 2650225 +  -4.2  -3.06228   GCGCGGGCCGCGGGA            GGCGC-GCT ACC ATCAGCGCC            ATTGTTTCTGCTCAG  44 60
CWR60_RS12635 NONE
CWR60_RS12640 2652593 .. 2652626 +  -2.9  -4.56597   CTGTCCGGCAAAGAT     CACCTGGGCCATCGG GATA CCGCTGGCCAGGCTC      TTTTTCGAGCCGCAG  71 160
CWR60_RS12670 2658614 .. 2658628 +  -2.1  -3.07935   TCAAGGATATGTTCC               GCAAG GACGG TTTGC               TTAAATGAATCCGAT  41 3
CWR60_RS12675 NONE
CWR60_RS12680 2661366 .. 2661403 + -28.5  -4.26076   CAGGCTGTTTGCAAG   GGCAACCCCCGGCCGCC GCAA GGCGCCCGGGGGTTGCC    TTTTCATGGCCGTCC 100 51
CWR60_RS12685 2661810 .. 2661828 + -11.6  -4.36914   GCTCGGCGAGGCTCT             CCCCGCCG CCG CGGCGGGC             TTTTCTCGCGCAAGC 100 60
CWR60_RS12700 2666841 .. 2666856 +  -2.6  -3.61178   AGTTTTCACGGGGCA              TGGTTA TTCC TAACTA               TTTCAAATGACTCGG  48 495
CWR60_RS12710 2667777 .. 2667788 +  -3.6  -3.48395   CCAGCCTGCCTGCCC                TGCG TCAT CGCG                 TTCTATAGACGGAAT  49 6
        tldD 2669308 .. 2669325 +  -2.6   -5.9873   CCTGGCCTGGAAAAA             TCGCGT AGTGCC GCGCGG              TTTTTTTTGTGCTAG 100 66
        aroG 2670946 .. 2670956 +  -2.4  -3.66784   CATGGCATCGGTCAA                 GGCC TGC GGGC                 TTGTATTGCGCATGC  50 374
CWR60_RS12730 2684846 .. 2684868 + -19.2  -4.72272   CGCGGTGCCCGGCAA           GCCCACGCGA AGG TCGCGTGGGC           TTTTTCATGCCCGCC 100 57
CWR60_RS12735 2686691 .. 2686723 +  -9.8  -3.53012   GCTGGCCGAGCTCGA     GGCGGCG-CTGGCCG AGCA CGGCCAGATGCTGGC      TTTCGAGCCGCCGCA  67 268
CWR60_RS12745 2689212 .. 2689247 + -15.4  -3.68619   GGCGGCCGGTATCGA    CGCGCGTCGTGCCC GCCACCCA GGGCTTGACGCGCG     TTTCGATGAATTCCA  88 408
CWR60_RS12760 2693141 .. 2693178 + -20.5   -2.6563   GCGCGCGCGGTTAGG   CGGGCCCCGGCGCGGCGC CAT GCGCCGCACC-GGCCCCG   TGCCTTATTCCACGG  95 27
CWR60_RS12790 NONE
        mnmA 2700486 .. 2700518 + -11.1  -3.73775   GGAGGCGCGCCGGTC      TCGCGGTGGCCGCGG CCG CGGCCGCCACAGCGG      TTTCATAAACCTGGG  73 63
CWR60_RS12800 2701422 .. 2701441 +   -15   -4.8622   GCCGGCAATGAAAAA            GGCGGCTC ATGC GAGCCGCC             TTTTTCATTGCGCGC 100 80
CWR60_RS12810 NONE
CWR60_RS12815 2704368 .. 2704380 +  -6.2  -3.73953   GCGAAGGTGTTCAAG                GCGG CTATT CCGC                TTTGCTCGGCCTGCT  61 260
CWR60_RS12835 NONE
CWR60_RS12840 NONE
CWR60_RS12845 2709963 .. 2709977 +  -3.4   -4.2828   ACTTCGCCGCCATCG               GGCAGC ACG GTCGCC               TTTTCCTGGATGCGG  67 245
CWR60_RS12860 2712733 .. 2712759 +  -2.8  -5.06103   CGGGAGCAGCGCGGC         TTGTCCGGCTGC CCA GCGGTCTGGCTA         TTTTTTGCAAATTGT  79 442
CWR60_RS12870 NONE
CWR60_RS12875 2713499 .. 2713542 + -22.8  -2.72471   TGTCCTTCATCGCGC ACAAAACAAAATGCCCGCAA GCGA TTGCGGGCATTTTGTTTTGA ATTCTCTAGTGGCGC 100 80
CWR60_RS12895 NONE
CWR60_RS12900 2718428 .. 2718445 + -14.1  -2.64616   CGCCGGCCGGGCGCA             GCGCGGC CAGC GCCGCGC              TGATGTCCATGGCGG  66 67
CWR60_RS12920 2723047 .. 2723069 +  -6.9  -5.02074   GGCGCAAAGAAAAAA          ACCCGG-CGC TTGC GCGACCGGGG           TTTTTTGGCACATCA  87 57
CWR60_RS12930 2723987 .. 2724015 + -15.4  -3.72576   CGCGGCAAAGAGAAA       GCCCCGG-CAATC ATGC GATTGACCGGGGC        TTTCATGAAGGCAGG  85 46
         rnr 2727002 .. 2727014 +  -6.2  -4.08064   CATTGCACCGTAGAC                CGGC CCGCC GCCG                TTTTCCGGCGGCGTT  66 79
        rlmB 2727808 .. 2727830 + -12.6  -3.03124   GTAAACTCTTGCAGC           GGCGCGCCGT CGC GCCGCGCGCC           TCTTCGAACGTCCGA  67 37
CWR60_RS12950 NONE
CWR60_RS12955 2729895 .. 2729909 +  -3.4  -4.66537   AAGCTAGTATTGGCG               CGGCTC AGG GCGCTG               TTTTCTCTTGACAGC  71 105
CWR60_RS12960 2730425 .. 2730437 +  -9.1  -3.64703   GGACGCAAAGGCAAA                TCGGC GCT GCCGA                TTTGCCTAACAAAAC  68 42
CWR60_RS12965 2730646 .. 2730679 + -12.4   -5.4505   AAGCAGGCGCAATAA    CCCCG-GCGAGGGCGC ATCG GCGCAC-CGCACGGGG     TTTTTTGTTGCGCGC 100 79
CWR60_RS12970 NONE
CWR60_RS12975 NONE
CWR60_RS12980 NONE
CWR60_RS12985 NONE
CWR60_RS12990 NONE
CWR60_RS12995 2737086 .. 2737098 + -10.5  -3.69068   GACAGGCACCCCCGC                GGCGG TTG CCGCC                TATTTCTTGCCGTCC  70 99
CWR60_RS13015 2741540 .. 2741556 + -11.5  -3.01712   CGACGAGACTCGTCC              CGCCGCG CGG CGTGGCG              TATTCCCAGGGCAGC  62 305
CWR60_RS13045 NONE
CWR60_RS13050 NONE
CWR60_RS13055 NONE
CWR60_RS13060 NONE
CWR60_RS13065 2751394 .. 2751406 +  -3.3  -2.52464   AAGGCGGCCCAGGCC                TCCGG CGC CCGCA                TGGATTGACCCGGCA  39 5
        garL 2752298 .. 2752315 + -11.3  -3.96624   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTCGCCGTA  79 82
CWR60_RS13125 NONE
CWR60_RS13130 2762667 .. 2762687 + -19.7  -3.75153   CACGTGCGATCGAGA            CGGCCCGGC CCT GCCGGGCCG            TTTGCATTGCAGCCA 100 47
CWR60_RS13135 2764159 .. 2764182 +  -6.6  -3.05343   GGCGTCCACGGAATA          GACGGACCAC GTTT GGCGTCCGTC           TGTTGGACATCTGCG  49 25
        pcaF 2765509 .. 2765524 + -10.4  -5.15969   CGGGCATGGCAAAAA              GGAGCC GTAA GGCTCC               TTTTTTGCGTTCCGG 100 54
        clpS 2766992 .. 2767010 +    -8  -4.19704   GGCCTGATCCGCATC             GGGCGCGG TCG CCGCGTCG             TTTTGCCTGGCCTTG  74 34
CWR60_RS13160 NONE
        pbpC NONE
        clpA 2776798 .. 2776811 +  -4.5  -2.94747   ACTGATCGACTGACC               GTGTG GATC CACGC                TCTCTGATCGCCTGC  45 28
CWR60_RS13175 NONE
CWR60_RS13180 NONE
CWR60_RS13185 2780479 .. 2780507 +  -5.3  -3.16564   GACGCGAAAACAGCG        GGTTAACCTTTTT CGT ATACGGGTTAACC        TTAATACCGTACGCG  49 20
CWR60_RS13190 2784477 .. 2784494 +  -6.2  -3.51365   AGTTGCATGGCTTAA             CCCGCG CCTGCT TGCGGG              TTATCTCCAATATCG  56 40
CWR60_RS13195 2785872 .. 2785907 +   -24  -3.53811   CTGATCGGCCTGTGC    CGGCGGCGCGGC-CCCC CCG GGGGCGCCGCGCCGCCA    TTTGCCGCAGCTGCG 100 37
CWR60_RS13200 NONE
CWR60_RS13205 NONE
CWR60_RS13210 NONE
CWR60_RS13215 2789548 .. 2789577 +  -5.5   -3.9461   TGGGCGAAGTCGAGG       CCTGAGCCTGTCC GCAC GCACGGGCGCCGG        TTCTTCTTGCGGAAC  63 21
CWR60_RS13225 2791631 .. 2791646 + -10.4  -6.23209   CGTTCGATTTCCAAA              CCGCCT CTCG AGGCGG               TTTTTTTTTGGTTCA 100 58
CWR60_RS13250 NONE
CWR60_RS13255 2798744 .. 2798769 +  -4.5  -3.53012   GCAAGCATAGGCAAC         CCTCCGGCCGC TCCC GCGGCGTGACG          TTTCCGGCACGGCGC  52 31
CWR60_RS13260 2800447 .. 2800461 +  -3.5  -5.00616   AATTAAAGGCTTTCC              GG-CGC TTGT GCGACC               TTTTTTGCCGCAGGG  81 125
CWR60_RS13265 2800858 .. 2800876 +  -2.4   -2.8655   GAAAGCGATGATGCC             TTTCGCTT GAT AAGGGAGA             TCTACTATGCCTCGC  40 16
CWR60_RS13270 2801267 .. 2801297 + -16.2  -4.09685   TACATCGCGGATCGC       TGCAAACGGGGCTG TAA TGGCCCCGTTTGCG       TTTTGAAGGCTCAAA  95 50
CWR60_RS13275 NONE
CWR60_RS13280 NONE
CWR60_RS13285 2805108 .. 2805121 +  -2.3  -3.88137   CCGGACCCCGCCTCT               GCGGA GTGA TACGC                TTTGTCGGCAATTGT  54 17
CWR60_RS13290 2805621 .. 2805650 + -15.8  -4.41047   TACGGCAGGCCGCGA       CGCCGCCTGGTTC TTCGC GAACC-GGCGGCG       TTTTCCTTGGGCGCT 100 61
CWR60_RS13295 2805845 .. 2805873 + -21.9  -4.47679   GACCAGTAGTTCCAA        GGCCGTCAGTGAT CAC ATCACTGACGGCC        TTTCTCTTTTGGCTT 100 36
CWR60_RS13300 2806644 .. 2806677 + -15.9  -3.14564   AACTGGATCTGTAGT     CCGCGCCGGGCTGCC CGTG GGCAGTCCGGCACGC      TTCCTCGGCCCGTGC  78 27
         bla 2810029 .. 2810084 + -17.4  -2.97707   TGGACGTGATTTCCG GACGCGCGAACTTGCGCCCCTGGGCT TCGC AGTACTGGCGCGCGCGTTCGCGCGCC TGGTTCTTGATCTCG  82 141
CWR60_RS13345 2812122 .. 2812159 +  -3.9  -3.56594   GGTGCCCATATAGTC   GGCGGCCGCGGCCTGGGG CAG CGGCGGGTTG-GGCCGGC   TTTGGGCGAATTTCA  51 491
CWR60_RS13355 2813829 .. 2813852 + -14.6  -5.79595   CAACCAGATCAAAAA          GGCTTGGCGA TTCA TCGCCAGGCC           TTTTTTGTTTTCGCA 100 35
CWR60_RS13360 2814642 .. 2814687 + -12.7  -3.05844   ATGTAGAACTGGATG CGCG-CG-ATACGGCCGCGCA CGTACT TGCGCGGCTGTATGCGGCGGG TCTTGAAGTCCACGA  66 360
CWR60_RS13370 2815530 .. 2815560 + -10.4   -4.8622   GCCGCGCCATGCGCA      GCCGCC-TGCCGC GATAGG GCGCCAAGGCGGC       TTTTTCATTGGGCGC 100 59
CWR60_RS13375 NONE
CWR60_RS13380 2816532 .. 2816548 +  -7.3  -3.81428   TTTTTGGTCGAATAA              TATGCGC ATT GCGTATA              TTTGCATTCCTTCCT  64 89
CWR60_RS13385 2817878 .. 2817899 +   -13  -2.74144   GGACTAGGCCGTGCC           GCGTGGCG CGTCGA CGCCACGC            ATTTCCGCCTCAGAC  67 34
CWR60_RS13395 2819460 .. 2819481 +  -9.5  -3.05384   ACAGTACGCCGGTGC           GCTGCAGATC GGC GATCTGC-GC           TTCGCTGCGGCCCAG  57 305
CWR60_RS13410 2823016 .. 2823042 +  -2.2  -3.04144   TTGCGCCGCGGCCAC         TGCCATTCTTAC CGT GTGAGGACGCCA         TGTTCGACGTAACGA  41 7
CWR60_RS13415 NONE
CWR60_RS13420 NONE
CWR60_RS13425 2825048 .. 2825058 +  -2.4  -3.54424   CGGGGGCCGAGCATT                 TGCC GGA GGCC                 TTTCGCGGCCTGGAC  48 448
CWR60_RS13440 NONE
CWR60_RS13445 2829377 .. 2829425 + -11.6  -3.04322   AACCCCGCATGCTGC GCCGGCCGCAG-GTGCCTGTCCC CGCC GGGACAGGCACACCGCTGTACGC TATTGCGCGATTAAC  65 57
        recA NONE
        recX 2835457 .. 2835503 +  -9.3  -3.33815   CGACTGAACGATGCC GCTTCGTGCGGGCGGCGGCGCGC GAT GCGGGC--CCGCCTGCCTGGGGC TTGCTTGCGGCCCGT  61 34
CWR60_RS13480 2839036 .. 2839056 +  -6.7  -3.40403   GGTCGGCCCGGGCCG            CGTCGCCGG CAA TCGGCTGCG            TTATACTCCCCAGGA  56 153
CWR60_RS13485 NONE
CWR60_RS13490 NONE
        sucD 2841817 .. 2841836 + -16.4  -5.78622   CCGCCTGTCCCAGGA            CGGCCCGC GATC GCGGGCCG             TTTTTTTTCGCATGC 100 57
CWR60_RS13500 2842778 .. 2842820 + -23.5  -5.07652   GCTGAACTACAATAG CGGGCTGTTCGGGCCCCGCC TTCA GGCGGGG-CTGACCAGCCCG TTTTCTTTTGGCCGC 100 47
CWR60_RS13505 2843701 .. 2843734 +  -5.9  -4.03413   GTTCGTGCTGGCCAT     CCTGGGGGTGGTGGC TTCG GTCATCGTCTCCAGC      TTTCTCTGACGCCCT  66 92
CWR60_RS13510 NONE
CWR60_RS13515 NONE
CWR60_RS13520 NONE
CWR60_RS13525 2848322 .. 2848339 +  -2.6  -4.23781   TCCGCCGGCCCGGCG             TCCGGC GACAAA GCCTGA              TTTCATTTTCATCAA  62 8
CWR60_RS13530 2848932 .. 2848973 + -23.8  -4.21194   GCCTGGGGCGGCCGG CGGCGCGGAAGCGA-CGGC AGGCA GCCGCTCGCATCCGCGCCG TTTTGCGTCATGCGC 100 53
CWR60_RS13535 NONE
CWR60_RS13540 2849967 .. 2849985 + -13.1  -5.96521   CCGGCATGATGCAAG             CCCCCGG TTGCT CCGGGGG             TTTTTTTTGGTTCAT 100 51
CWR60_RS13545 2851387 .. 2851398 +  -7.2  -3.29511   ATCGCGAGGGTGCGG                GCGG CGCG CCGC                 TTGTCGCCGCCTGCG  55 115
CWR60_RS13555 2853966 .. 2853993 +    -9  -4.07568   CGCATGCTGACCCGC        CAGCCAGGCGCCC CAG GGGCGCC-GGCAC        TTTTCGGGGGCAGGC  75 58
CWR60_RS13560 2855779 .. 2855792 +  -5.2  -3.24755   TGGGCCGGCTGAGGC               CGGC CGACAT GCCG                CTTTCTTTCCGCCAT  51 29
CWR60_RS13565 2856109 .. 2856142 +  -4.5  -3.21934   GACTTGCGCACTGCG    GCCGGCGAGCGTTCG CCACCT CGG-CGG-CGCCGGC     ATTTTCTGCAAGGAG  49 77
CWR60_RS13570 2856632 .. 2856660 + -10.1  -3.57144   GTCAGTGTCGGCCGT        GCCGGACAGGCGC ACC GCGCCATTGCGGC        TTTGCACCTGCACCG  67 150
CWR60_RS13580 2857978 .. 2857994 +  -9.4  -2.69964   CGATGTGCCGCAAGG              CCGCGT CGCCT ACGCGG              TGCTGTCGTTCGGCG  55 246
CWR60_RS13600 NONE
CWR60_RS13605 2860689 .. 2860719 + -12.5  -3.05463   TTGCAACCGCCGCAA      CTGGCGGCCGGCGG CTAG CC-CTGGCCGCCCG       TTGGCTGGCCGGCCT  67 8
CWR60_RS13610 2861339 .. 2861356 +  -8.4  -2.64616   CCGGGGTGCCCGTCA             CGGGCA GTACGA TGCCCG              TGATGTAGCTGGCGC  52 53
CWR60_RS13640 2867368 .. 2867405 + -14.9  -3.04144   GACCACGCGCGCGAT   GCGGCGGTCGCGTACGGT GAC ATCGTGCGCCA-CGCCGC   TCTTGCCGGTGAAGC  74 458
CWR60_RS13680 2873787 .. 2873817 +  -6.7  -2.94218   CCTGCTCTCCTGACG      GCGCCTGCGCGCGG CTTG CCGCG-GCGGTCGA       TATATCGTAAGACAT  50 28
CWR60_RS13685 NONE
CWR60_RS13690 2875788 .. 2875819 +   -10  -2.64155   CACGATCCAGATGGC      CGGCGGCGCCGGCGC CTC GCG-CGGCGCCATGG      TGGGTTTCGGCGACA  57 498
CWR60_RS13710 NONE
CWR60_RS13735 NONE
CWR60_RS13740 NONE
CWR60_RS13855 2908578 .. 2908599 +  -3.6  -3.53012   GGCAGCACCGCGTTG           GCCGCGAT GCCCTG GTCGCGGG            TTTCGGCGGCCAGGG  49 205
CWR60_RS13875 NONE
CWR60_RS13880 NONE
        arsC NONE
        arsH 2914852 .. 2914864 +  -5.5  -3.01712   CATCTAGCGCGCGGC                CGTGG CGC CCATG                TGTTCGGCCGCCACC  47 34
CWR60_RS13900 NONE
CWR60_RS13905 2917853 .. 2917895 + -11.1  -3.27475   CCGGTCTGAGGGCGC CGCCCGCGCGTGGCCAGGG TTTCC CCTTGGATGCGCGCCCGCG TCTTGTCCTGCCGGC  66 32
CWR60_RS13910 2919870 .. 2919889 + -10.6  -2.90075   CTGCCACCGTTGCGG            ACGCGGGG CCTG CCCCGCGC             TATCGTTCACAGCGC  57 494
CWR60_RS13960 2930231 .. 2930262 + -14.5  -3.21747   CACATGTCGACGGCC     GCAC-GCCGCGC-CG CGCT CGTGCGCGGCCGTGC      TTCCTCGTCCGATCG  78 88
CWR60_RS13965 NONE
CWR60_RS13970 NONE
CWR60_RS13975 NONE
CWR60_RS13980 NONE
CWR60_RS13985 2935349 .. 2935362 +  -5.2  -3.72576   AATGTCGGCCATCAG               GGCC GGCGCA GGCC                TTTCCTGCGCGGCCA  57 91
CWR60_RS13990 2936473 .. 2936495 + -12.7  -3.21099   TAGCGTTGCAGCATG           CGCGCCACG ACCTG CGTGGTGCG           TTCGTCGTCGGCCAC  69 236
CWR60_RS14010 2940311 .. 2940330 +  -3.5   -2.6927   CATGGGCGGGGCTTT            GCTTGGCG GTCCA CGCC-GGC            TACTCTGTACGCAGT  41 55
CWR60_RS14015 2941064 .. 2941089 + -17.6  -2.79831   GGGTCCCGTTCGGAA         CCGCCAGCGC AGCACC GCGCTGGCGG          TGTGCTGGAGGTTGA  85 66
CWR60_RS14020 NONE
CWR60_RS14025 2941770 .. 2941795 +   -14  -2.79831   AGCCGCCATTCAGAA         CCGCCAGCGC AGCACC GCGTTGGCGG          TGTGCTGGCGGTTGC  69 45
CWR60_RS14035 NONE
CWR60_RS14040 NONE
CWR60_RS14100 2962094 .. 2962107 +  -9.5   -2.5092   TTTCCAGGCCGCGCC               GCGCG GCCG CGCGC                ATTCATAAAATATTC  54 61
CWR60_RS14105 NONE
CWR60_RS14110 2964129 .. 2964154 +  -9.7  -3.24232   GGCCGATCCGCCCGC         CGC-CCTGCCTA GAA TCGGCAGGAGCG         TGTCTTTCAAGGGAG  61 120
CWR60_RS14115 2965455 .. 2965473 +  -3.1  -4.98061   TGCGCGCTCATGGGC             TGCGGAA ATCAC TTCCGTG             TTTTATTTAATATAT  77 519
CWR60_RS14125 NONE
CWR60_RS14130 2967399 .. 2967440 +  -4.4   -3.1505   CGGCCGCCATCCTGA GCGGCGTTGCGGG--TTCAA TGCA TGGAATGCCCGCCAGGCCGC TTCCTCAGGCCTGCT  47 26
CWR60_RS14140 NONE
CWR60_RS14145 NONE
CWR60_RS14150 NONE
CWR60_RS14155 NONE
CWR60_RS14160 NONE
CWR60_RS14165 NONE
CWR60_RS14170 2975578 .. 2975612 +  -5.6  -2.70932   CGCCCGGCCCCCCAA    ATGGGGGGCGCGCGC GCGCCG GCGCG-GCCTCACAA     TCGTTCCCGAAAGCG  45 47
CWR60_RS14175 NONE
CWR60_RS14180 2977570 .. 2977612 + -11.2  -3.73224   TCGCGCCCGGCGTAG CGGTCGGCCGGCGCCACGC AGACCA GCATGCCGC-GGCCCACCG TTTCCTGGCGGATCA  74 418
CWR60_RS14190 NONE
CWR60_RS14195 2980309 .. 2980333 + -11.4  -4.21194   TGTACGCGCGCTGAG         CGCGGGGCCGC CCGC GCGGCCC-GTG          TTTTCCCTAGTGCCC  91 27
CWR60_RS14205 NONE
CWR60_RS14210 NONE
CWR60_RS14215 NONE
CWR60_RS14220 NONE
CWR60_RS14225 2985667 .. 2985701 + -12.1  -2.62184   CACGCAGGCCACCGG    CGC--GCCGCGCCCGCC CAC GATGGGCGCGGCCAGCG    TCATGTCGCCCAGGA  62 165
CWR60_RS14240 NONE
CWR60_RS14245 NONE
CWR60_RS14250 NONE
CWR60_RS14255 2990870 .. 2990893 +  -5.8  -3.53012   CAACACACCGAGACC          GGCTCGCGCG CGGT CGCGCCGCCC           TTTGCCGAACCGGCG  54 298
CWR60_RS14265 NONE
CWR60_RS14270 NONE
CWR60_RS14275 2995258 .. 2995276 +  -2.3  -2.69964   CTCAATAGGTTGTTC             ATCCAGG CCGGA CCTGGGA             TGCTGTGGTTACCAC  38 82
CWR60_RS14280 2996364 .. 2996411 +   -19  -2.80816   CCCGCCAGCGCGCGC CCGCGCGCGTGCGCGGCCGGCGC ATA GCGCCG-CCGTGTCCGCGCGCCC TGTCGTGCCTGCGCA  89 119
CWR60_RS14285 2996858 .. 2996871 +  -3.1  -2.96031   ACGAGTCAGGCGGCG               CTTTG GTTA CGAAG                GTTCTTTCCGATACC  42 133
CWR60_RS14290 2997463 .. 2997495 +   -12  -3.82083   GCCACGCGCCCTCAT      CTGGCCCCTTTTCG GTTCG CGAAGAGGGGCCGC      TTTGCGTTATGCTCG  79 60
CWR60_RS14295 2999264 .. 2999279 +  -2.4  -3.74526   ATACACCGTGGACGG              CGCGTC GGCG GGCGGG               TTCTTCCATTCGTAG  53 131
CWR60_RS14305 3000723 .. 3000737 +    -7  -3.91897   GCTCGATACCGTGAT               GGCCTG GAC CTGGCC               TTTCTGGATGAACGG  66 342
        prpR NONE
CWR60_RS14330 3006462 .. 3006500 +  -6.4  -2.78596   GCTGATCCGCCATCC   GCCCGGCGCCTGAGCCGG CGC CCGCCTGGCCCGCCGTGC   TATCGTGGCCCGATG  47 13
CWR60_RS14340 3008822 .. 3008833 +  -7.2  -3.78934   CACGCCACTTGGAAC                GCCC CTGC GGGC                 TTGTTATAAACGGGG  64 86
CWR60_RS14345 3009463 .. 3009496 +  -3.8  -3.63515   GGCCTCCAGTTCCAT    CCAGGAACGCGCCAGC GGAT GCTGGA-CGC-CCTGG     TTCTTGCCGATAGGC  51 360
CWR60_RS14385 3020406 .. 3020443 + -12.5  -2.90813   CGGCGGCCGCGGCAT   TGCCGCGCATCCGCGCC GACC GGCGCGGCGCCACGGCA    TCGTTTCCGCGCCTG  66 65
CWR60_RS14390 NONE
CWR60_RS14395 3023290 .. 3023339 +  -9.2  -3.29144   GTTCGATCACAATAC TCG-GCGCGGCCTGACACCGGGCCG CGC CGGCCCGCGG--GGGCCGCGCACAA TTATCAACACCATCC  61 12
CWR60_RS14400 3024824 .. 3024836 + -10.5  -2.79796   TGGATCGGCCAGGGT                GCGCG GCG CGCGC                TGTACTGCCATGGCG  57 154
CWR60_RS14440 NONE
CWR60_RS14445 NONE
CWR60_RS14450 NONE
CWR60_RS14455 NONE
CWR60_RS14460 3035482 .. 3035492 +  -3.2  -4.09685   TCGCGGCACTCGCGT                 CATC GGA GGTG                 TTTTGGCCCGTACGA  59 251
CWR60_RS14465 3036400 .. 3036421 +  -8.7  -3.30771   CATATCGTCGGCCAC           CGCC-TCGGC CTG GTCGATGGCG           TTCTGCACGCTCTCG  59 328
CWR60_RS14475 3037931 .. 3037943 +  -3.3  -3.57615   AGCAGCTTCACTTCC                TTGCC CGT GGCGG                TTTCCACGATCTTGG  51 142
CWR60_RS14600 3064925 .. 3064943 + -17.4  -3.15544   CCTGAACGCAAGGAA             CCCCCGGC GCG GCCGGGGG             TTCCTGCCCATGGCA  84 36
CWR60_RS14610 NONE
CWR60_RS14615 3067951 .. 3067962 +  -5.8  -2.87683   CGCAACCGCTAGGAT                GTGG GGCT CCAC                 TCTCTGAACAGGTGT  46 67
CWR60_RS14620 NONE
CWR60_RS14625 3069670 .. 3069692 +  -6.9  -4.13767   CGACGCGCTGGCCGC           GCTGGCGCG CCGCA CGCCCTAGC           TTTTGCGCTCGCCCG  67 4
CWR60_RS14735 3093618 .. 3093630 +  -6.2  -3.73953   GCGAAGGTGTTCAAG                GCGG CTATT CCGC                TTTGCTCGGCCTGCT  61 453
CWR60_RS14745 3096356 .. 3096376 + -10.3  -3.55487   GGCGGCGAAGCGCCC            TGCGCCGGC GTG GCCGGCGGG            TTGTCGTTGATGTCG  67 103
        glgA 3098597 .. 3098619 + -12.6  -3.34013   GCCGCCGCGATCGCC           CTGGCGCGCG ATA CGCCCGCCGG           TTCGTTCGCGGCGTG  71 109
        glgB 3107368 .. 3107380 +  -4.7  -3.76373   TTCTCGGCCAACGCC                GCGCG CAT CGAGC                TTTGCCTGTTCGACG  58 135
        malQ NONE
        ptsJ 3121826 .. 3121842 +  -4.3  -3.09908   ACATCAACCAGGCGA              CTTCCCA TAA TGGGGCG              GTTATTTTCCGAACG  47 55
CWR60_RS14825 3122322 .. 3122335 +  -5.2  -2.77787   CGCCCCCCGATGACC               CGGC GCAACG GCCG                ATTTAGCCTGCTGTT  45 6
CWR60_RS14830 NONE
CWR60_RS14835 NONE
CWR60_RS14840 3124725 .. 3124746 +  -9.4  -3.01712   CCGCACCGCCGCCTG           GGCCGCGCC ATGGC GGC-CGGCC           TGTTCCACCGACAGG  55 396
CWR60_RS14855 3126341 .. 3126363 + -20.6  -5.41746   GCCGCGCCGCGATCG           CAGGGCCGCC TCG GGCGGCCCTG           TTTTTTTGGACGCTT 100 43
CWR60_RS14865 3128699 .. 3128749 +  -5.6  -3.42996   ATGGTGGGCTCGATG CCCGCGTCGCGCAGCAT-TTGCAGCA CGT TGC-GCGACGTGCTGCA--ACGCGGG TTGTGGTAGATGGTG  52 403
CWR60_RS14885 NONE
CWR60_RS14890 3133682 .. 3133695 +  -2.3  -2.62184   TCCGGGCGCGCGTCC               GCTCG ACCT CAAGC                TGGTCTGACGCGCAC  38 4
CWR60_RS14895 NONE
CWR60_RS14900 NONE
CWR60_RS14905 NONE
CWR60_RS14910 3135843 .. 3135855 +  -2.6  -2.78384   GCGGTGGCCGTGGTC                GTGC AGAGG GCGC                TGTCATGAACCGCAC  38 5
CWR60_RS14915 3136612 .. 3136628 +  -4.4  -3.10641   AAAATTCTCCAGCCC             CGAGTGG ACTG CC-CTCG              TTCCCTGATGCCTTC  47 1
CWR60_RS14920 3137508 .. 3137546 + -10.4  -3.53012   GTGCCGGCGGCGGGC  GCCGCCGAACAACGCGGC GCAAG GCC-CGTTGTTCG-CGCC  TTTGCCGCGCGCCGG  67 41
CWR60_RS14925 3138145 .. 3138157 +  -4.7  -3.02739   TGTCGCCACGGACGC                CGCGC GCG GCCCG                TCTGTATCCGTTCCC  45 82
         psd 3139159 .. 3139178 +  -2.1  -3.88787   GGGCTTGCTAGATTG           CGGCCTGGC CATC GCC--GCCG            TTTCTGGAGCTCTCA  54 76
CWR60_RS14935 3140837 .. 3140869 +  -5.6  -4.31837   CGGGTCGTTGGGCAC     GGCGATG--GTCGCGC CCT GCGGGATGGCATCGCC     TTTCTTCAGTTTCTT  69 461
CWR60_RS14955 3142922 .. 3142967 +  -5.2  -3.41962   GCAACCGCGAACACG CGCGCCGCCTCGCCGCTGGTCG GCAT CG-CCTGCGTCGCGGTGG-GCA TCTTCTGTCTTACCC  53 43
CWR60_RS14965 3144684 .. 3144708 + -19.3  -2.62616   AGCTTCCAGGCCGCA          GCGCTGTGGCC GCT GGCCACGGCGC          TGCTGTACGCCGTGA  93 228
CWR60_RS14985 3147641 .. 3147651 +  -2.4  -3.78953   GCAAGCCGCGCTGAA                 GGCC GAA GGGC                 TTTCGTAATACGCCT  54 7
CWR60_RS14990 3148721 .. 3148749 +  -8.7  -3.29144   TGACCAGCAGGTTGG        CGCCCGTGTCGTG CAG CACCACCCGGCCG        TTCTCCAGCACGTAG  59 227
        ugpB 3156845 .. 3156875 + -21.1  -3.18118   TTGGCCTGTGCCTGT       AGCGGCCGGCCGG CATTA CCGGCCGGCCGCC       TGTATTCTCACCTGG 100 145
        ugpA NONE
        ugpE NONE
CWR60_RS15045 3159845 .. 3159878 + -17.3  -3.44325   GCCGCAGCGGGGACA     GGCGCCCGTGCGCGG CGAG CCGCGCGCATGCGCC      TTACTTGTACGACGT  87 79
CWR60_RS15055 3161874 .. 3161902 + -19.1  -4.56597   CGCGCGGCCTGCCGA        TATTAACGGACGC CTG GCGTCCGTTAATA        TTTTTGCGCACGGAA 100 47
CWR60_RS15060 3170457 .. 3170467 +  -3.2  -4.25104   GCTTTACGAAGTCGA                 TGAC GCG GTCG                 TTTTCGTCAGCGGCC  63 498
CWR60_RS15130 NONE
CWR60_RS15135 3189709 .. 3189744 +    -9  -4.70266   AAGCCCGTCCAGCAC   GACGGCGCCCGCGCGG CGGGCA CGGCGCGGG-GCC-TC    TTTTTCCCTGCTGTT  86 94
CWR60_RS15155 3195476 .. 3195494 + -10.2  -2.62184   GTCACCCCGATCCCG             GCCGCCAC CAT GTGGCGGA             TGGTCTCCAGCGAGG  55 278
CWR60_RS15190 3204937 .. 3204995 + -12.3  -4.06419   CGACGCATGAACGGC GCCGGCGCGCGGCCAAAGAAAAACCGCC CGAA GGCGGCTTTTCC-TGGCGGCGCACGGCC TTATTTGTCCACGAA  83 31
CWR60_RS15200 3207225 .. 3207252 + -15.6  -4.59773   ACTGCCTTGTTTGTC        GGCAAAGCGGCC ATCC GGCCGCTTTGCA         TTTTTCCCCGTAGCA 100 107
CWR60_RS15205 NONE
CWR60_RS15210 3209952 .. 3209980 +  -2.4  -3.15544   ATCGTCACCGCCACG       CCCGG-CGC GAACACGATCAG GCGGCCGGG        TTCGTACGCCTGCCC  43 259
CWR60_RS15225 3212792 .. 3212845 + -19.6  -3.01712   GGGGCCGGCGCCGTC CCGGCCG-CGGCCGCCGCGGCAG-CCG GTT CGGCCTGCCG-GGCCGCCGCCTGCTGG TGTTCGACCGCCCGG  87 294
CWR60_RS15255 3220641 .. 3220669 + -11.6  -2.65298   TCCAGCGAGGCCGCC        GCCGCCGCGGTC TGCTC GGCCATGGCGGC        ATTCTGCTGCGTGGC  61 105
CWR60_RS15270 3224772 .. 3224807 + -20.4  -2.84602   GGCACCCCGGATTCA    GCGCGTGCCAGTCCCC CTGC GGGGACAGGCACGCGG     GTTTACTGCAATGCC 100 120
CWR60_RS15285 3227027 .. 3227071 +  -3.6  -3.02471   TCATGGAAGACACGG GCGGCGTGCGCGTCATC-TACT ACT AGCACGATGAC-CTCATGCCAC TGTATCTGCTGGCGC  44 0
CWR60_RS15290 NONE
CWR60_RS15295 3227692 .. 3227704 +  -9.1  -3.28712   GGGCAATTTGAGCTC                GCCGT GCA ACGGC                TTGTCGGACACGCAC  59 243
CWR60_RS15305 3230343 .. 3230364 +  -7.9  -3.61398   CTCCTCGATGGGCAC           GGCC-GGCGC GCC GCGCCCGGCA           TTGTTGAACAGCACA  60 501
CWR60_RS15315 NONE
CWR60_RS15320 3232527 .. 3232537 +  -8.2  -4.09685   CGCGAGGGCTTGCTG                 GCCC CGG GGGC                 TTTTCCGCCCTCGGG  72 45
CWR60_RS15325 NONE
CWR60_RS15330 NONE
CWR60_RS15335 3236107 .. 3236133 + -13.6  -3.14132   CTTGGGCTTGATGGC         CAGCGCGCGGGC GAT GGCCACGCGCTG         TTGCTGGCCCCCCGA  72 308
CWR60_RS15370 3244629 .. 3244660 +  -4.2  -5.06414   TGCCGCCACGCCGGC      GGCGGCGC-CGCGCG GGC CGCGCGCGCGATAAC      TTTTTCTTAACCCGC  81 87
CWR60_RS15375 NONE
CWR60_RS15380 NONE
CWR60_RS15385 NONE
CWR60_RS15390 NONE
CWR60_RS15395 NONE
CWR60_RS15400 3250265 .. 3250284 +  -2.7  -3.58343   CACCAACGTCATCGG            CTGCGCC ATCTTC GCCGCGG             TTTCCGGCTCGTCGG  49 328
CWR60_RS15440 NONE
CWR60_RS15445 3274697 .. 3274714 +  -3.4  -3.73775   CGGCCCGGTGCAGCC             GCC-GCA GGCTA TGCAGGC             TTTGCTGGCCATAGG  55 422
CWR60_RS15490 3284075 .. 3284087 +  -3.3  -4.07885   GCCGGCCAGCTCCAG                CGGCA GCA TGACG                TTTTCCAGCGCCGTG  60 365
CWR60_RS15500 3285068 .. 3285086 +  -5.9  -3.21912   GCTGGCTCAGCCCGC             GGCCGAC TGAGC GTCGCCC             TTGATGGCTTCGGCG  53 16
CWR60_RS15510 3287991 .. 3288017 +  -5.1   -2.8352   CGAGCTGGCCACCAT        CCGGC-CCGCCGT CTG ACG-CGGAGCCGC        CTTGTTCAGTTACCG  46 10
        rlmJ 3289264 .. 3289306 +  -8.8  -3.28924   CACCACGCCCAGCGC CGCCCGGCGCAGGCCCGGCG CGA CGTCCGGATAGCGCGCGGCG TTCTCGCCGGCGATG  59 407
        cueR 3292123 .. 3292145 +  -8.3  -3.29263   CGGCCGCCTCGGCAA           GGCGCTCGG CCTCC TCGCGCGCC           TTCTGCCGCGCCTGT  58 72
        plsY 3299670 .. 3299697 +  -9.8  -2.52464   GGCGCGGATCGCCTT        GGCCGCCAGC ACCTCGAC GATGGCGGCC         TGCGTTGCCGCCGCC  55 349
CWR60_RS15585 3301882 .. 3301912 + -18.3  -3.55622   CGCGCGCCTCGCCCC       GCAAGCAGGCCGC CTCGC GCGGCCTGCCTGC       TTTCGAGGCCTTCAA  90 49
CWR60_RS15590 3303107 .. 3303117 +  -8.2  -3.53012   GGCACGGCGCGCGAT                 CGCG CCA CGCG                 TTTCGCCCACCGACC  62 43
CWR60_RS15595 3303730 .. 3303745 +  -4.6  -3.64703   AGCTCCAGTTGCGCG              CCGTCG GCGT CGAAGG               TTTCGCTGCGCACGC  54 147
CWR60_RS15630 3311051 .. 3311102 + -13.6  -3.21747   CCCGCCGTCCCACGG CGCGCAGCGCCGGCGCAAGCCGTG CCGCGT CGCGAC--GCGCCCGCGCAGCGCG TTACTCCTCCCATCC  73 65
CWR60_RS15635 NONE
CWR60_RS15640 3313682 .. 3313696 +  -2.7  -3.74693   AGAACCCCTGCCCCG               CGTGG CCGGT CCCCG               TTTCATGGAGTCGCC  53 39
CWR60_RS15645 3314550 .. 3314584 + -14.9  -3.63515   GCTCGTCGATGACGA     GGTGGGCCATGCCGC GTTCG GTGGCCAGGCCCACC     TTCTTGCCGATGGGC  83 64
CWR60_RS15700 3325012 .. 3325052 +  -8.2  -2.75064   AAATCCAGCTCAACT GACTG-GGGTGCCTGTCCC CGCG GGGACAGGCACCTGCTGGA  TGCTTGCCTCACCCG  52 24
CWR60_RS15720 3330816 .. 3330833 +  -4.1  -4.31943   TCCCGCCGCCCGCCA             TGAATCG GGGA CGCTTCA              TCTTTTTTCTGTACC  68 42
CWR60_RS15725 3331606 .. 3331629 + -10.9   -3.0806   CCAGGCCCGCGCGCC          GGCGGGGCG GATCGG CGCGCCGCC           TCTTGCGGATTTCGC  64 47
CWR60_RS15730 3332916 .. 3332926 +  -2.4   -4.4078   CATACGCGATGGTCT                 GGCC CTG GGGC                 TTTTCGTTGGCCAGC  68 83
CWR60_RS15765 3339798 .. 3339821 +  -2.2  -4.07568   CGGCAGGCGCCGCCA          CGGCCTGAGC GCCT GCCCAGCCCC           TTTTCCCGCCCCGAA  58 18
CWR60_RS15770 NONE
CWR60_RS15775 3342514 .. 3342539 + -13.3  -2.57132   CCTGGCGATCCTGCA         CGATGTGCCGC GTCA GCGGCGTATCG          ATTATCCCGGGCGCC  66 269
CWR60_RS15805 3348792 .. 3348803 +  -7.2  -3.05844   TGCGTCCGGGCAGCA                CCGC ACGC GCGG                 TGTTCGAATGGAAAG  51 477
CWR60_RS15825 3352192 .. 3352229 +  -5.3  -3.00003   CCGAATTGGCGCGCG   CCCGCCAGCCTGCCTGG CCGG CCAGCCAGGGGCGCGGA    TCATTGTTGTCGTAG  46 444
CWR60_RS15845 3354915 .. 3354930 + -11.8  -3.28712   ATGAACCAAAAAAAA              CGCCCC TTGC GGGGCG               TTCTCGCCGAAGCGG  68 37
        mltB 3361591 .. 3361644 + -14.5  -2.52464   CACGGGCTATTGATG CCCCGTGCCGCGGCGCGGC--CCGCC ACGCG GGCGGACGCCGCGCC-CGGCCCTGCG TCAGTTGAAGACGCC  71 28
CWR60_RS15950 3378083 .. 3378103 + -18.3   -5.4505   CCGCTACAATGAGGG            GGGCCTCGC ATA GCGAGGCCC            TTTTTTCTTGCCGCG 100 53
        ubiG NONE
CWR60_RS15960 3379615 .. 3379637 +  -2.7  -2.94872   GCGGGCCTCATGCCC          GT-GCCGG CGCCACAC CCGGCCAC           TGATTGTTCCATCCA  42 59
CWR60_RS15965 NONE
        ssrA 3381447 .. 3381469 + -13.6  -5.96521   CAAGTATTTACCTAA           TAGCCAACTT CAA AAGTTGGCTA           TTTTTTTTGGTTCAT 100 57
CWR60_RS15975 NONE
CWR60_RS15980 3383285 .. 3383313 +  -6.1  -3.02471   GCGGGGCAAAATAGT        TTTCCGATGTGTA CTA TACACATTGAAAG        TGTGTATAGTACACA  49 192
CWR60_RS15985 3383517 .. 3383542 + -11.1  -3.18264   GTTTGAAGTGAGACA         CAAGCCTCGGA GCAA TCCGGGGCCTG          TTGGTCCATGCCACA  64 30
CWR60_RS15990 3384249 .. 3384285 + -11.6  -2.67515   CTGCCCTAGCCCATG    CGCTGGCGGATCGC GCGCCGGAA GTGGTCTGCCAGCG    TAGTGTGGTGGTCCG  62 308
CWR60_RS16000 NONE
CWR60_RS16005 NONE
CWR60_RS16010 3388262 .. 3388275 +  -9.5  -3.01712   CCCGACGCAGCAAGG               CCGGC TGCT GCCGG                TGTTCGCCCCGGCGC  57 407
CWR60_RS16020 3389384 .. 3389424 +  -9.6  -4.29432   GCAGTGGACGACCGG CGCGGTACTGGC-GCGC-CG CGC CGAGCGCTGCCCGGACCGGG TTTTCCTGCGCTTTG  80 111
CWR60_RS16030 3391671 .. 3391692 + -12.9  -3.75153   CCGGGTCAGAATTCG           CCGGCGCGG GCGG CCGCCCCGG            TTTCCATTGCGCCCG  79 60
CWR60_RS16040 NONE
CWR60_RS16045 NONE
CWR60_RS16050 3395915 .. 3395941 +   -13  -3.53012   ATGCGGCGCGCGGCC         CGGGCAGGGC AGGGCAC GCCTTGCCCG         TTTGGGCCCGCCGGC  77 40
CWR60_RS16065 NONE
        tcuB NONE
        tcuA 3401714 .. 3401735 + -18.7  -3.04517   GCCGCCTGAACGCAA           CGGCCCGCC TGAC GGCGGGCCG            CTTTTCGGACCGGAT  90 32
CWR60_RS16115 NONE
CWR60_RS16120 NONE
CWR60_RS16125 3411986 .. 3412011 +  -5.3  -3.53012   CATCGCGGCCGCCTG         CGCCGCG-CTGC ATT GAAGGCGCGGCA         TTTCCAGCACGAACG  54 10
CWR60_RS16130 NONE
CWR60_RS16135 NONE
CWR60_RS16140 NONE
CWR60_RS16145 NONE
CWR60_RS16150 3419638 .. 3419666 + -10.1  -3.27923   ATGACTGGATCACCT        CGTCGCCGGCGGC ATG GCCGTGGGTGTCG        TTGATGATCTTGAAG  63 523
CWR60_RS16160 3422099 .. 3422151 +  -5.2  -3.14344   TGCGCCGGCGTCACG GGCTGGTTGGGCCCGGCGCTCACC CACGA GGCGATCACCTCGCCCAGGCCGCC TTGCTGGAAGCGCTG  47 260
CWR60_RS16180 3425956 .. 3425975 +  -3.4  -3.26444   GGTGATCAGCAGGGT            ATGGCCGG CCAG CCGGCGAA             TGTCTTCTTCGCCGC  47 251
        cphA 3434212 .. 3434229 + -14.1  -5.47218   CTCAAATGTAACTAA             GGCCGGC GCAA GCCGGCC              TTTTTTTCCCTGCGC 100 84
CWR60_RS16205 NONE
CWR60_RS16210 NONE
CWR60_RS16215 3435255 .. 3435276 + -15.9  -5.96521   CGCCGTACGTGTACC           GCCTTCGGG TTCG CCCGAAGGC            TTTTTTTTGGTTCAT 100 73
        bamD 3446818 .. 3446846 + -21.1  -4.08064   ACTCGCGCAGTCCAA        GGAAAGCCCGGCC CCA GGCCGGGTTTTCC        TTTTGCGCGGCCGTT 100 45
CWR60_RS16285 3451482 .. 3451518 + -27.4  -2.71364   AAGCGCTGATCGCAA   CGCAGGCGCCGC-CCCG TCAT CGGGTGCGGCGCCTGCG    TCGTTGCCCCGATCC 100 32
CWR60_RS16325 NONE
CWR60_RS16330 NONE
CWR60_RS16335 3462394 .. 3462417 +  -2.4  -3.56092   GGCGCGTGACGACGC          CCTCG-ATATG AAC CATGCGCGAGG          TTTCCGGAATGATGC  50 196
CWR60_RS16345 3464350 .. 3464367 +  -2.5  -3.58343   ACACGACCGAGCCGG             CCAGCGC CTGG GCGCGGA              TTTCGCGATGCTCGA  50 376
        mdeB 3476712 .. 3476749 + -20.6  -3.06796   CCTGGCAGTCGTGAC   GGCCGCATCGGCCGGG ACGTGG CCCGGCCGATGCCGTC    TTCGCTGCGGTGCAG 100 27
CWR60_RS16385 3479303 .. 3479320 +    -4  -3.04144   GGCTCCATAACTCTT             CTGGCG CCAAGA CGCCCG              TGTTACCCATGCAAC  44 182
CWR60_RS16390 NONE
CWR60_RS16395 3480538 .. 3480573 + -14.7  -2.70932   TCTAGTGCATCTCAG   CGCGGCGG-GCAGGCGG CCCG CCGCG-GCGCCGCCGCG    TCGTTCCCGCCCACC  72 45
CWR60_RS16440 3488859 .. 3488880 + -14.4  -4.07885   CCGGCATTGCCGCCA           CGGGCCCG CGCAGA CGGGCCCG            TTTTGCAGGACCGTC  85 42
        prpB 3489999 .. 3490036 +  -6.1  -2.60065   GCAAATCGCAATAAT   GGGCGGCGGC-GCGGC ACGAGCC GCCGCCGGCACCACCC   CTGTGTTTATCCCAT  46 27
CWR60_RS16450 NONE
        acnD NONE
        prpF NONE
CWR60_RS16465 NONE
CWR60_RS16470 3497187 .. 3497200 +  -3.9  -3.53012   TCACGCTGGTTGTCG               TCAAA CCCT TTTGA                TTTCCGCGCCAGCGA  51 12
CWR60_RS16480 3499173 .. 3499191 +  -7.4  -6.06723   AAGCCCCTTTTAAGA             CCCGCT CTAAACC AGCGGG             TTTTTTTTTGGCCGG 100 96
CWR60_RS16485 3499803 .. 3499816 +  -3.1  -3.84246   TCCTTCACGGAGGCG               TCATC GCGG GATGG                TTTCATCCTTGGGCA  56 62
CWR60_RS16490 3500718 .. 3500738 +  -8.3  -3.09492   AATAACCCTTATACG            TCCCCGT TAGGGAT ACGGGGA            TGTTGCAGTTCACGG  56 39
CWR60_RS16495 NONE
CWR60_RS16500 NONE
        hslO NONE
CWR60_RS16510 3505244 .. 3505260 +  -7.9  -2.84325   ACAGGCCGGACTTGT              CCACGCC GAA GGCCTGG              TCGTATTTGCCGGGC  52 443
CWR60_RS16530 3508758 .. 3508791 + -27.5  -3.16742   CGGTAGACAGCGGTT     TCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGA      TTACTGACCATTAAC 100 511
CWR60_RS16620 3528161 .. 3528207 + -16.5  -5.00884   CGGCATGTAAGCGCG GGCGCGCACGTGGGCGCC-GGCA GGA TACCAGGCGCCCTCGCG-GCGCC TTTTTTCCAGACCGT 100 31
CWR60_RS16625 NONE
CWR60_RS16630 NONE
CWR60_RS16635 3530897 .. 3530915 +  -8.8  -3.45849   GATGCCGTCCAGGCC             CGCGGC CAGCCGC GCCGCG             TTGTCGTGGTCTAGC  61 273
CWR60_RS16670 3539496 .. 3539513 + -14.1  -4.41494   AAGGCCCAAGCAAAA             GCGCCCC GAAC GGGGCGC              TTTTGCTTGGGCCTC 100 61
CWR60_RS16695 3545327 .. 3545342 +    -4  -2.56271   CCGCCACATGATCTG              CGACCAG CTG CTG-TCG              GTGTTGTCCTGGACC  40 319
CWR60_RS16705 NONE
CWR60_RS16710 3548154 .. 3548181 + -18.4  -2.71924   CATGACCTGAGCCGC        GCGGGCGAGGCC TGAC GGACTCGCCCGC         CTTTCCGGGAGGCTG  87 11
CWR60_RS16715 3548585 .. 3548597 +  -3.3  -5.40072   GACTTATCGTCTAAG                CTCGC GAG GCAAG                TTTTTTTGCCGCACA  90 85
CWR60_RS16720 3549360 .. 3549378 + -14.6  -6.09133   CTGCGCATCGAAAAA             GGCTTGCC GAC GGCAAGCC             TTTTTTTTTCGCCTC 100 50
CWR60_RS16725 NONE
CWR60_RS16730 NONE
CWR60_RS16735 3552755 .. 3552802 +  -7.4  -3.64822   GGTTGGCGATGCCCA CGCCGTGGCCGGCCAGCGCCAG TTGG CAGACGGTGGACGAGTACGGCG TTTCGATGGCGGCGT  60 228
         maf NONE
CWR60_RS16840 NONE
CWR60_RS16845 3571604 .. 3571624 +  -3.1  -2.77192   CAGCACCGAGCCATA            GAGCAGCGG CTG CTGCAGATC            GTTCTTGCCGGCCTT  39 97
CWR60_RS16870 3578596 .. 3578622 + -23.8  -4.79223   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 34
CWR60_RS16910 NONE
CWR60_RS16915 3589134 .. 3589171 +  -8.3  -3.28924   CCATGTCCAGCGAGG   CGTCGTCGGGTACCTGG CCAG CCAGGTAGGCCACGCCG    TTGTAGACAGCCATG  59 477
CWR60_RS16930 NONE
CWR60_RS16935 3591784 .. 3591826 +  -3.4  -4.58685   GGTCGAAAACTACTG GTAATCCCCCCTATGGCGGG GGGAA TCCGCCAT-GAGGGG-TCGC TTTTTCGCAACATTT  71 22
        phaZ 3593183 .. 3593198 + -11.8   -4.2687   GCGCGCTCCCTGCAA              CGGGCC GCCT GGCCCG               TTTCTGCTTTTTACG  91 50
        rsxB NONE
         nth 3594572 .. 3594586 +  -3.4  -3.88985   ACATCGTGGGAAACA               CCGTGG AAA CCCTGG               TTTCTGAAGCGTTTT  56 108
CWR60_RS16955 NONE
CWR60_RS16960 NONE
CWR60_RS16965 3597516 .. 3597526 +  -8.2  -2.52516   AACCTCCTGAAGGAA                 GCCG ACA CGGC                 CTTGCTCATCCGGCG  51 39
CWR60_RS16970 NONE
CWR60_RS16975 NONE
CWR60_RS16980 NONE
CWR60_RS16985 3601425 .. 3601459 + -30.1  -3.09516   GCTGACCCGCGCGCA     CGCTGGCGGCGCGGC GCCAG GCCGCGCCGCCAGCG     TTCAGTCCTGGGCGC 100 36
        msrB NONE
CWR60_RS17030 NONE
CWR60_RS17035 NONE
CWR60_RS17040 3610674 .. 3610693 + -13.6  -5.78622   TCGCCATCAACAAAA            TTGCCCGC TTTC GCGGGCAA             TTTTTTTTCGGCTGC 100 52
        lplT 3619046 .. 3619085 +  -9.9  -3.28924   CTTGCCGCCGCCTCA  GCCGCGCGCC-GCCAGCA GCAGG TCCTGCCAGGCGCGCGCC  TTCTCGGCCGGGCTG  63 47
        ompR NONE
CWR60_RS17080 3623479 .. 3623489 +  -4.6  -3.10677   TAGCGTAGAATTTAG                 GGCT TGA GGCC                 TTGCCTGCCTTAATT  47 38
CWR60_RS17085 3624086 .. 3624102 + -10.8  -3.95584   GCTGTAATTTCCCCG              GCCCGG CTCGT CCGGGC              TTTCATTGCTCCAGA  79 34
CWR60_RS17090 3624666 .. 3624718 + -15.5  -2.90283   AGCGCCCCCCGCGGT GCGCCGGCCTCCCCCGCCGGCGGCCG CAGC CGGCC-CCTGCGCGGG-G-CCGGCAC TCATTCCTTTCCCTC  76 40
CWR60_RS17115 NONE
        serB 3632502 .. 3632526 +  -7.7  -2.70932   GCCTCCCGCCGCCCG          GCCGGCCCGAG CGC CTTACGCCGGC          TGCTTGCCCAGCGGG  51 111
CWR60_RS17130 NONE
CWR60_RS17135 NONE
CWR60_RS17140 3637658 .. 3637674 +    -3  -4.11484   CATCGATTGCGGCTC             CAGCACC AGCC GGT-CTG              TTTTCAGCACTTGCC  59 508
CWR60_RS17245 NONE
CWR60_RS17250 NONE
CWR60_RS17255 3662374 .. 3662390 +  -2.1  -3.09516   GCTCATGCTCGCGCG              TTGACGC GCA GCGCCCA              TTCGGTGATGGCCAC  42 22
CWR60_RS17285 3668832 .. 3668865 +  -6.9  -3.09516   GGCAATCTCGCTTTG     ACTAATTATCCAAGA ACAT TCTTTGATAATTAGG      TTGCGTCATGAAAAG  52 107
CWR60_RS17290 3670393 .. 3670417 +  -9.9  -4.07568   CAAGTCCTCGGGCGA          GGCCACGTCGG TGG CCTACGTGGGC          TTTTCCAGCAAGACC  78 439
CWR60_RS17300 NONE
CWR60_RS17305 3675250 .. 3675304 +    -3   -3.5764   CGCCAGGCTGCCTGA CAGCGCGCCCCGGCGGCAGCGCCGCC AGG GTCGGCGCCGGCGCTCAGTCGACCAG TTTGAGGGTGCCCTT  49 26
CWR60_RS17320 3679043 .. 3679053 +  -4.6  -3.01712   CCCGGACATGCACGT                 CTGG AAG CCGG                 TGTTCCGCGACGGCC  45 333
CWR60_RS17330 NONE
CWR60_RS17335 3683372 .. 3683423 + -12.9  -2.53876   CGATCGCCTCGGTCA GGAACTGCGGCGCGTCGCCGCGCA GCCGG TCCGCGCCCA-GCGCCGCGGTGCC TCCCTTCAGGTAGGC  62 233
        lrhA NONE
CWR60_RS17365 3690667 .. 3690694 +   -12  -3.14693   GTCGACAATCAGCAG        GTGTCAGTCCCC CTGC GGGGACAGATAC         TGTCTTAGTCGTCAA  66 62
CWR60_RS17395 3698689 .. 3698726 +   -12  -3.05816   ACTGGGTAGCCTGCC   GCAGCGACGCGAAC-GC GTGCA GCTGTTCGAGGCGCTGC   TTCCATGAGCGCTCC  66 470
CWR60_RS17425 3704303 .. 3704313 +  -4.6  -4.07568   GGGTGCACCATCAAA                 CGGC ACC GCTG                 TTTTCCCCAGGCCCG  62 31
CWR60_RS17430 3705377 .. 3705416 +  -2.8  -3.90291   TCGACCACGGTCTTC  TCGATTTCCAGCAGGACCA CGA TGG-CATGCTCGATATCGC  TTTCGTTGACCAGCT  56 434
CWR60_RS17460 3710893 .. 3710907 +  -2.1  -2.50816   AGCCCCAGCGGCCGA              GG-TCC TGCA GGATCC               ATTCGTAGATGACCA  37 520
CWR60_RS17485 3717515 .. 3717528 +  -2.3  -2.71731   GGCTCATACACGGCG               TCGCC GCGC GGCCA                TAGTTCGACGATCCA  39 171
CWR60_RS17510 3721806 .. 3721825 + -13.6   -5.4505   CGCCAGACATTGCAA            GCCCCTGA TTCG TCAGGGGC             TTTTTTCTTGGCCCC 100 36
CWR60_RS17515 NONE
CWR60_RS17520 NONE
CWR60_RS17525 NONE
CWR60_RS17530 NONE
CWR60_RS17535 NONE
CWR60_RS17540 3729186 .. 3729204 + -13.8  -2.61264   TCATCATGGAAGGCC             GCTGCCCG CTC CGGGCGGC             CTTGTCCATGGAGCC  69 111
CWR60_RS17545 3730441 .. 3730458 +  -7.7  -4.18197   GCCAAGGTCCAGGCA             CGCTGAA CATC TTCGGCG              TTTTCCATACGCACT  74 20
CWR60_RS17550 3732844 .. 3732869 +  -4.7  -5.29846   AAATACCCGGGAAAC         CCCTGTAGA ACCGAGCG TCTGCGGGG          TTTTTCTTTCGGGTT  93 107
CWR60_RS17555 3733776 .. 3733787 +  -3.6  -3.12668   CAGGCGCCGACGCCG                GCGT AAAT GCGC                 TTGGGTCTCCAGATG  45 85
CWR60_RS17565 3735029 .. 3735066 +  -9.8  -3.05384   CTGGCGCATAACGGC   CCGCGGGCCGGTCAGCC TTCCT GGCTGA-TGACCGGCGG   TTCGATCCAGAAAAA  60 30
CWR60_RS17575 3736013 .. 3736050 + -10.5  -2.59742   AAATTTGCCGCAACG   CAGCAAACGCCGGC-GTC CCG GACTGCGGGCGGTTGCGG   ATTGTCGCCATTGCG  57 153
CWR60_RS17580 3736503 .. 3736522 + -10.6  -5.96521   GCAAATCAATGAAAA            AGCCGCCC GGAT GGGCGGCC             TTTTTTTTGGTTCAT 100 53
        trxB NONE
CWR60_RS17620 NONE
CWR60_RS17625 3746584 .. 3746623 +  -3.5  -4.15044   CCATGTAGGCGAAGG TGGCG-GCCA-GCCCGGCA AACA TGCCCAGCGTGGCGCCCCA  TTTGTTGGCGCGCCG  63 266
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 3754051 .. 3754071 +  -6.7   -2.8655   CCTGGCGCTGGACCG            CCTGCGCTG AAG CGGCGCGCG            TATAGTATGCGTGCC  50 16
CWR60_RS17660 NONE
        kdpE 3758059 .. 3758072 +  -6.7  -3.37071   CGGTATAGCGCTGTA               GATCC GTCA GGATC                TTGTGCATCCGGTTT  52 509
CWR60_RS17685 3762217 .. 3762245 +  -5.8  -3.33261   TCTTGCGCACGTTGG        CCGTGGCCGCGC TGCCC GCGGCGCCACGC        TTGTAGGCCTTGAGC  52 195
CWR60_RS17700 NONE
CWR60_RS17705 3765191 .. 3765216 +  -7.5  -3.16881   GCACGAACCCCAGCT         TGCGGTGCAGCG CGA CGCTGC-CGGCG         TTGGTGGCGTCGATC  53 148
CWR60_RS17720 3769173 .. 3769191 + -13.1  -4.41047   GCCACGCAAAAGAAA             CGCCGGC TTGAT GCCGGCG             TTTTGCTTGCGCACT 100 77
CWR60_RS17760 NONE
        recN 3779040 .. 3779052 +  -6.2  -3.73953   GCGAAGGTGTTCAAG                GCGG CTATT CCGC                TTTGCTCGGCCTGCT  61 254
        bamE NONE
CWR60_RS17785 3782367 .. 3782379 +  -4.7  -3.29144   TTGATCGATCAGCCA                GCCGG CGG CCAGC                TTGTAGCGGCCATCG  49 263
CWR60_RS17795 3783491 .. 3783512 + -14.5  -5.63236   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTTTTGCAT 100 37
CWR60_RS17840 3794083 .. 3794098 +  -3.2  -3.40403   CGCGACGCTATTCTC              GACTTC CCAC GAAGCC               TTGTCCTGCGAAGGG  48 53
CWR60_RS17845 NONE
CWR60_RS17850 3796592 .. 3796607 +    -4  -3.90588   CGCGCAGCGATACCC              CTTC-GG ATT CCAGAAG              TTTCATTACCCCATA  58 426
CWR60_RS17895 NONE
CWR60_RS17900 3807361 .. 3807378 +  -5.5  -3.71848   GCCCGGCCGGGCATG             GGCTCCA CCTA TGGAGCA              TTCTTGATGACCACG  57 278
CWR60_RS17905 NONE
CWR60_RS17910 NONE
CWR60_RS17915 NONE
CWR60_RS17920 3811031 .. 3811088 + -11.8  -2.64155   GCTACCCAACCGCTT TCCCTGCCAGCCGC-ATCGGCCGGGCC ACATC GGCCCGGCCGAGGGGGGCTTGCACGCC TCACTTTCGACAAGG  61 44
CWR60_RS17925 NONE
CWR60_RS17930 NONE
CWR60_RS17935 3813692 .. 3813722 +  -4.5  -2.56046   TCATGTTCATGCGCG      CCTAGGCGGCGCGG CGAG CCG-GCGGCCCTGG       TCGATTACAATTTCC  42 21
CWR60_RS17940 NONE
CWR60_RS17945 NONE
CWR60_RS17950 NONE
CWR60_RS17955 3818373 .. 3818391 +    -3  -3.01001   CCCCTCGCATACAAC             GACAAGGA GAC TCCATGAC             TGTCATTTCCCGCTA  42 61
CWR60_RS17960 3819407 .. 3819447 +  -4.7   -3.2794   AACTAGGCTTGCGGG TGGCTACCGGG-TGCGGGCC GCAA GCCCCGCAGCCCGGC--CCA TTGGTGTCCATGGAC  49 35
        modA 3820282 .. 3820298 +  -2.9  -2.78384   CGGCTACCGCTACCA              GCTGTTC TCC GAATCGC              TCTGATCGGCCAGGC  40 4
CWR60_RS17970 3821097 .. 3821118 +  -2.1  -2.56596   GTTGCTTGGCCTTAA           GCAGTACCC ATGC GGGAATAGC            TCAGTTGGTAGAGCG  38 136
CWR60_RS17975 3821196 .. 3821224 +  -3.8  -5.55769   CCAAACACCAAAAAG       GGAAGC-TAGCGG TTAC CTGCCGTGCTTCC        TTTTTTCTTGTAACC  95 38
CWR60_RS17980 3821328 .. 3821347 + -12.1  -3.94877   CTCCAAACACTTCAA            GGCCCGC CGCGTC GCGGGCC             TTCTTGTTCCAGGAT  82 35
CWR60_RS17985 3821814 .. 3821833 +  -7.1  -3.14468   CGTGATCCGGCCGTA            GCGCG-GC CCGGC GCGCGCGC            TTGCCTATAATGGCG  52 25
CWR60_RS17990 NONE
CWR60_RS18000 NONE
CWR60_RS18005 NONE
CWR60_RS18010 NONE
CWR60_RS18015 3826035 .. 3826072 +  -3.2  -3.00923   GCCGCCCTGAGCACG   CGCGGGGCGGCAAAGT CGATCT ACAATTCCGCCCCATG    TCTATCCTCTTCCAC  42 31
CWR60_RS18020 3827465 .. 3827480 +    -6  -3.62046   GGCCACGGCGCTTTC              CGAGCC GGTG GGCGCG               TTCTTGGAGAACTGC  57 371
CWR60_RS18030 3829251 .. 3829286 +  -8.8  -3.54424   GCGCATCGCGCGGCC    CGGCCGGCCGATCGGGC GAG GCCTGCGCGCCCG-CCG    TTTCGCGGAATGCGA  62 67
CWR60_RS18055 3837074 .. 3837091 + -10.5  -3.27476   TGCCAGTTGGCGCTT             GGGCGCG TTGC TGCGCCC              TTCCTGCTTGGGCGT  63 82
CWR60_RS18075 NONE
CWR60_RS18080 NONE
CWR60_RS18085 3841495 .. 3841507 +  -2.6  -3.07816   CGTCTCCACTAAGGG                CGGG TGGAT CTCG                TTGGCTGCCTCCAGA  41 29
CWR60_RS18090 3842896 .. 3842914 +  -6.7  -3.77832   TGTTGCGGCGCGCAT            C-CACCGG GTGG CCGGTGCG             TTCTTCGCTTTGCGC  61 313
        galU 3845411 .. 3845429 +  -4.4  -2.71924   GCGCTCGGTAAAGGC             GATGACCG CGC CGGCCACC             ATTTGCGGCGCCATG  40 299
CWR60_RS18125 3851376 .. 3851390 +  -2.8  -4.09685   CGGAAAAGCGGCGCG               TGCC GGACAGG GGCA               TTTTAGGGGCTGGCG  59 521
CWR60_RS18135 NONE
        dusB NONE
CWR60_RS18145 NONE
        purH NONE
        ruvC NONE
        ruvA 3856909 .. 3856957 + -16.6  -3.30124   CGCGACCGCCTCCAG CGCGGCGGGCGGCGCGGCCAGCCC CGA GGGC-G-CGGCGCCGCTGGCCACG TTGTCGCGCGTGAGC  82 83
        ruvB 3860270 .. 3860304 + -14.9  -4.84359   GGTCGATGGGGTCGG    GCCGCGC-GCGGGCGC CCGC GCGCGAGCCGCGCGGC     TTTTTCTCGGCCTCG 100 274
CWR60_RS18190 3864213 .. 3864223 +  -4.6  -4.12188   AGACCGTGTGGGGCA                 TCGG CTA CCGG                 TTTTCGCCCTGATGA  62 3
CWR60_RS18195 3865653 .. 3865705 + -14.1  -3.33696   TGCGGCCGCTTGACC CGCCGGCCG-CGCCG-TC-AGGCGCC CGGC GGCGGCAAGAGCGGCACCGGCCGGCG TTCCTTGCCGAACAC  75 28
CWR60_RS18210 3870001 .. 3870038 + -16.9  -3.18274   CCCGACAATCCGCTG   TCGCCGGCCGCC-CTCCG CTT CGGGCCGGCGGCCGGCGC   TTCCATTCCAATCCA  84 85
        minC 3870993 .. 3871011 +  -2.4  -3.86346   GCCTTCATACGCTTT             TTGCTTTA CGA TAACGCGA             TTTGTACGCACATAA  54 87
        minD NONE
        minE 3872119 .. 3872155 + -23.8  -2.56596   CGCAAAACTGAACAC    TCGGGTGCCTGTCCCC GCACG GGGGACAGGCACCCGC    TGAATTCATGCCGGC 100 30
CWR60_RS18250 NONE
        iaaH 3878206 .. 3878239 + -13.7  -3.59979   CGATCGCGGCGCAGT     GCATCGCGGCGCTTG CCGG CGCGCGCCGCGGCGC      TTTAAGGTGGAACGA  78 87
CWR60_RS18260 3878852 .. 3878863 +  -3.6  -3.01791   CGTGCCCAAGCGCCC                GCGG CGCC TCGC                 TCTTGCAGCGCGCGT  43 103
CWR60_RS18295 3886519 .. 3886538 + -10.6  -5.81412   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTTACCTGCA 100 49
        uvrA NONE
CWR60_RS18310 NONE
CWR60_RS18315 3894595 .. 3894637 + -14.1  -2.77182   AGGTGCAATACCACT GACT-CCGGTGCCTGTCCCC GCAG GGGGACTGGCACCGGCAAAC TCCTTGCCTGTCCCC  69 24
CWR60_RS18330 3898192 .. 3898226 +  -5.4  -3.53811   GCCTTGCTCGCCGCC     GCGCCTGCCGCCTGAC CAT GTCCGCCGCCCGGCTC     TTTGCCCGCAGTCCC  54 11
CWR60_RS18335 3899377 .. 3899401 +  -9.1  -3.01712   GCTTCGGACAGGTCG          CCGGCGCGCAG CGC CAGCGGGTCGG          TCTTGCCGCCGGCGC  55 456
CWR60_RS18345 NONE
CWR60_RS18350 3902078 .. 3902095 +  -2.6  -3.05463   CGCGGGCGCGGCGTT             GGCGGT ACACTG ACAGCC              TTCCATCCAGCCGGT  41 52
        pdxH NONE
CWR60_RS18360 NONE
CWR60_RS18365 NONE
        purU 3905364 .. 3905378 +  -5.6  -3.05384   CGAAATGGCGCAAGG               CCGCCT GCA AGGCCG               TTGCCTGCAGGGACG  46 65
CWR60_RS18380 NONE
CWR60_RS18385 NONE
CWR60_RS18390 3910234 .. 3910284 + -13.4  -2.53876   AGCGCCAGGCCTTCG CGGCG-CG-GATCGGCGCCGC-CGGC CAG GCCGTGCGGC-CCGATCACGATGCCC TGGATTCCGCTGGGA  67 58
CWR60_RS18400 3912987 .. 3913002 + -11.8  -3.57144   GCGCGCAAGAAAAAA              GCGCCC CGCG GGGCGC               TTTCGGCGTGCACGG  72 46
CWR60_RS18410 3915137 .. 3915159 + -12.7  -3.24747   CCCAACTGACGCGCC          CG-GCGCCGC TCTA GCGGCGCGCG           TTGGTCATGTCGCCC  71 32
CWR60_RS18420 NONE
CWR60_RS18425 3918644 .. 3918681 +    -9  -3.35679   ACAGGCACCCTTGCC   GCGGGTGTCGCTCCTC CCCAAC GGGGACGGGCGCCCGC    TTCTCACTGCCCGCG  63 127
        mutL NONE
        miaA 3922242 .. 3922271 + -23.7  -2.78816   TGCCCGACTGAGCAA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TGTCATACGCCATGA 100 30
CWR60_RS18450 NONE
CWR60_RS18455 NONE
        pcnB NONE
CWR60_RS18465 3927049 .. 3927062 +  -4.5  -3.38326   GCCGGCGTGTTCAGC               GCG-CG CGC CGACGC               TTCGTTCAGCTTCTG  49 189
CWR60_RS18485 3932608 .. 3932639 + -15.9  -3.76413   CGCAGGCCGTCCAAT      GGTGTCCGGTGCG CTCGCA CGCACCGGATGCC       TTTCCCATTTTGCAA  90 42
CWR60_RS18490 3933610 .. 3933620 +  -2.4  -3.29144   CCAGTTCGAGCGCCA                 GGCC CAG GTCC                 TTGTGCGCCAGGTCG  44 257
CWR60_RS18505 NONE
CWR60_RS18510 NONE
CWR60_RS18515 NONE
CWR60_RS18520 NONE
CWR60_RS18525 3939341 .. 3939377 + -10.8  -3.28712   AAGCTGGAGTAAGCC   GGC--CCGCACGGCGCCG GCT CGGCGCCGTGCCTACGCC   TTCTCGGGCCAGCGC  66 29
CWR60_RS18560 NONE
CWR60_RS18565 NONE
CWR60_RS18570 NONE
CWR60_RS18575 NONE
CWR60_RS18580 NONE
        glyQ NONE
CWR60_RS18595 NONE
CWR60_RS18600 3955418 .. 3955436 +  -2.2  -2.53015   CAACTGCTGCAGGAG             GCCTGATC CAT GGCCTGGC             TGCGTTCGGCGCTGT  37 20
CWR60_RS18605 NONE
CWR60_RS18610 3957088 .. 3957098 +  -2.4  -4.11216   GATTTGCTACAATGA                 CGCC CTG GACG                 TTTTACCCATGAGGA  58 63
        gloA NONE
CWR60_RS18620 NONE
CWR60_RS18630 3962042 .. 3962056 +  -4.2  -3.64703   TGCGCGACATGATCA               GCGG CGTGTGC CCGC               TTTCGGTCAGCGCGA  51 297
CWR60_RS18660 NONE
CWR60_RS18665 3971221 .. 3971237 +  -2.2  -3.53012   CAAGGAGGCTGCAAC              GCGGTA TCCTC TACCAC              TTTGGCCCGAAGACA  48 94
CWR60_RS18670 3972360 .. 3972379 + -16.4  -3.15147   TCCGCCAGCCGGCAT            GGGCGGCG GACG CGCCGCCC             TGTCTATTGCTTGAC  81 388
CWR60_RS18690 3974797 .. 3974811 +  -3.4  -4.07687   CGCGCTTGGCGTCGG               CCTCGG AAA CCGGCG               TTTTCGCCGCCCGGT  60 247
CWR60_RS18725 3984040 .. 3984054 +  -2.1  -3.84406   CGCTCGCGCAGCGAC               GATTG CGGGC CGATC               TTCTTCTGGTAGGCG  56 430
        nspC 3985916 .. 3985935 +  -4.2  -3.18366   AGGATTACGTAGACA            GCCTG-TCC TGA GGAACTGGC            TCTGTTGATTGAAGC  45 15
CWR60_RS18740 3987487 .. 3987538 +  -6.5  -3.28924   CCAGCCGCGCCAGTT GCTG-CCGGCG-GTAGAGCCGCTCGT CCT GC-AGCGGCGCTTCGCACCGGACGGC TTCTGCGGCGGCGTC  52 287
CWR60_RS18750 3988981 .. 3989011 +  -6.2  -4.27584   GGCCGTTCCGTCTTA       GAGATTGGTAGTGG TAA TTACTTTCAATCTC       TTTTCGGTTAAACAT  70 135
CWR60_RS18755 3991627 .. 3991640 +  -3.7  -3.36803   CGTTCCGGCGCGCCT               GCAGG ACCA CCGGC                TTGTCGATGCCCTTG  47 217
CWR60_RS18770 NONE
CWR60_RS18775 3995179 .. 3995205 +  -8.6  -2.73364   CGTTCTAGGGGCCGC         GCCCTGCGCTGC CTG GTAGCGCACGAC         TCGTTGCCCTCACGC  52 33
CWR60_RS18785 NONE
CWR60_RS18790 3998396 .. 3998409 +  -5.9  -3.05844   TCATCCGGCGCCGTA               GGCGC CGCT GCGTC                TATTCGCATCCCACA  49 25
CWR60_RS18795 NONE
CWR60_RS18800 NONE
CWR60_RS18805 4000895 .. 4000920 + -16.3  -3.31188   TCCGCAAATGGAAAA         GGACTTAGCGA CTGC TCGCTAAGTCC          TTGATCATTCTGGTG  82 138
CWR60_RS18815 NONE
CWR60_RS18820 NONE
CWR60_RS18825 4005190 .. 4005218 + -17.5  -4.20696   GGCTCTAAAAACCAA        GGCCTTGCAACTC GAT GCGTTGCAAGGCC        TTTTAAAGTTCGTAC 100 33
CWR60_RS18845 4007284 .. 4007340 +  -7.9  -3.63694   AGGAGTATGCCCAGG GCCACCGCGCCGGCGCCGCGCG-CG-GCC AGC GGCCCGACATGCA-CGCCGGCGTCG-GGC TTCTTGAAGCTGCCT  60 154
CWR60_RS18865 4011154 .. 4011178 +  -5.6  -3.91897   GGACAGCCTCGTCCT         GGCGCGCCAGC CGTC GC-GGCCCGTC          TTTATCCGTGCAACG  63 51
CWR60_RS18915 NONE
CWR60_RS18920 NONE
CWR60_RS18925 NONE
CWR60_RS18930 4023420 .. 4023447 +  -4.7  -4.07568   CGCCCCCGCCACCTC        GGCCATCGCCT GCACGA ACGCGGCGGCC         TTTTCCGCCACGCCG  63 254
CWR60_RS18970 4033053 .. 4033065 + -10.5  -2.52896   CAGGCCTGAGCGCCC                GCGCG GCC CGCGC                TAGCTTCCCGCCTCG  56 32
CWR60_RS18980 4036121 .. 4036157 +  -5.1  -3.13403   GAGCGTGCGCGTCAG  CGGC-CGC-GGCAGCAGC CGCA GC-GTCGCCAGCGAGCCG   TCTTCGTGCCGCACC  47 132
CWR60_RS18990 4038051 .. 4038077 +  -4.3    -3.445   GGAATCGTGAAGCTG         GCGACCTGAGC CGCGC GCTTAGGACAC         GTTTTTCCTGCATAA  51 17
CWR60_RS18995 NONE
        mgtE NONE
CWR60_RS19005 4041019 .. 4041042 +  -5.2  -3.28712   CAGCATCCGCCACGG          TCCAGGCC GAACACCA GGCCCGGA           TTGTCGGGCGAGCCG  49 374
CWR60_RS19030 4045069 .. 4045090 +  -9.3   -4.1891   GTCGCTCAGGCGCTT           GTCGCCGGC CACC GCCAGCGGC            TTTATCTTGCCGGCC  75 332
CWR60_RS19055 4051390 .. 4051418 +  -8.7  -3.51032   GCGGCTTGCCCAGCA        GATACAGGTCGCC GAT GGCGTCCAGGATC        TTGTGCTTCACGAAT  61 307
CWR60_RS19140 4072539 .. 4072549 +  -4.6  -3.30771   CGCCGCCCGTGAAAA                 TCGC ATT GCGG                 TTGTAGAGCATGTGC  49 481
CWR60_RS19155 4074838 .. 4074850 +  -7.7  -2.54523   GATCGGGCCAAAGGG                CGTAC GGC GTACG                TCCCTTCCCGTCTCA  50 43
        hppD 4084187 .. 4084213 + -18.1  -2.90496   CCTGCCTGGCGCGAG         CAAGGCCCACC CTCGC GGTGGGCCTTG         TCATTTCGGGCGCCG  86 43
CWR60_RS19215 4088176 .. 4088218 +  -6.1  -3.61398   GTCGATGTTCTTGGC GCCG-CGCGCGCGCTTGACG ACGT CCTCGAGCGCGGCCGACAGC TTCTTGCCGGCGCCC  57 471
CWR60_RS19240 4090452 .. 4090466 +  -4.2  -2.94411   GCATGAACTAAGGAG               ACCATG AGT CATGGA               ATTGTTTGACAACCT  44 30
CWR60_RS19245 4092005 .. 4092022 + -14.1  -5.54192   GCCGGCCGGCGCGAA             CCGGGCC CTCG GGCCCGG              TTTTTTTGGGTTCAT 100 63
CWR60_RS19255 NONE
CWR60_RS19260 4096111 .. 4096150 + -26.5  -3.05384   CTGCGCGACTGAGGC  CGCGGCGCCGGCCGCTCG CAGCC CGGGCGGCCGGCGCC-CG  TTCGATCAGGCCGCC 100 29
CWR60_RS19270 NONE
CWR60_RS19280 4100496 .. 4100522 +  -7.1  -2.82516   AGCCGCTGCGCCGGG         ACGCCTCGGCC TCGTC GGCCGGCGCGC         TCTGGTCGTACAGGG  50 68
CWR60_RS19300 4105080 .. 4105098 +    -3  -2.65264   GGCGGGCGCCAGCCC             GCCCCG GCAGCCA CAGGGC             TCCTATCGATCGTGA  39 48
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB 4109160 .. 4109179 +  -2.8  -2.54325   CAACGTGGGGCCCTT            TTACCCGT TAAC ACGTGTGA             CTCTCTTTGCAAAGG  39 15
         pal 4109730 .. 4109759 + -17.1  -4.54727   AGCAGCCCCACCACG       CGTCGGGACGGTC ATCC GGCCGCCCCGACG        TTTTCGTTTCAGACC 100 56
        ybgF NONE
CWR60_RS19340 NONE
CWR60_RS19345 4112410 .. 4112437 + -10.5  -4.15453   ATAGGATGAGCACCT        CGC-CCGCCGCC AGCCC GGCCGCGGCGCG        TTTTCCGCTGACTTC  78 120
CWR60_RS19350 4113910 .. 4113921 +  -2.2  -3.21099   CCGGCCCTGCACTAC                GCGCG CCA CG-GC                TTCCTGGTCACGCCC  42 465
CWR60_RS19365 4117283 .. 4117303 + -13.9  -3.05343   CTTCGCAGCCCAGCC            CCGCGGCCG CCT CGGCCGAGG            TCTTGCCGGTCTCGG  69 406
CWR60_RS19375 4118369 .. 4118397 +  -2.1  -3.01712   CAGCCCCTTGCCGCG        CGGGCTGCGCGCC CCC GATACGCCGACCG        TATTGGCCGAGACAA  41 53
CWR60_RS19380 NONE
CWR60_RS19385 4121360 .. 4121371 +  -3.6  -2.52464   CTCAGGCGCGCTCGA                TGGC GATC GCCG                 TCGCTTCGCCGCCGC  40 88
CWR60_RS19405 4126333 .. 4126363 + -12.5  -3.29144   TTGCACGACGCCCCC       GGCCACGTCGGCC AGCGC GGCCGACGTACCC       TTGTACGGCACGTGG  70 423
CWR60_RS19430 4130928 .. 4130938 +  -6.8  -3.51825   CCATCGACGCCGCCA                 TGCG GAA CGCA                 TTCTCGTTCGAGTCC  55 378
CWR60_RS19460 NONE
CWR60_RS19465 4138589 .. 4138603 +  -2.7  -2.62184   TGACGCCAGGGAACT               GGCGG GCACG CCGCA               TGGTCTGAGCAGAAG  39 38
CWR60_RS19470 4139590 .. 4139640 +  -4.2  -3.40403   CGGCCCGGTACCTGA GCGGCTCAGGCGCCGGCCGGCTCG ATC CGGCCCCACCAGCGCGCGCGCAGC TTGTCATAGGCCAGG  49 26
CWR60_RS19485 4141406 .. 4141461 +  -9.8  -3.13403   CCAGCACCAGCCAGA GGC-T--GCGCCGC-GCGTCGGCAAAGCG CGC CGCCTGGCCG-CGCAGCGGCGCGTACGCC TCTTCGTCGGCCGCC  60 53
CWR60_RS19500 4144755 .. 4144792 + -10.6  -3.53224   GCCGGTCATGGAGCA  GCC--GGCCAGGCGC-ACG CGC CGTTGCGCCCGGCCACGGC  TTTCGCGCAGCGCTA  70 123
        gltS 4146052 .. 4146063 +  -4.4  -3.16881   GCCGTTCGTGGGAGG                CATG TGAC CATG                 TTCATCCGCTGGCTC  47 19
CWR60_RS19510 4147996 .. 4148010 +  -2.1   -3.1505   GATCACGATGCCCGC              GCC-TC CCTT GATGGC               TTCGTCCAGGCTGGT  43 455
        gloB NONE
CWR60_RS19560 4158325 .. 4158350 +  -3.3  -2.71712   GCGCGCGTCCGCCAA         GCCGCTA AAATTCCTACAA TAGCGGC          CTTTCCGCAAGGCAA  40 64
        fabI 4159262 .. 4159312 + -21.8  -2.62616   CTGTCCCCGCAGGGA GGGTGCCTGTCCCCGCAGGGAGGG TGC CTGTCCCCGCCGGGACAGGCACAC TGCTGTACGCCATCG 100 121
CWR60_RS19575 4161005 .. 4161038 +  -8.9  -3.53091   CCTCGATACGGCACG     TGCTGCAACCAGGC GCCGCTG GCCTGGC-GCAGCA     TTTCGCCGGCCAGGT  61 460
CWR60_RS19595 4165061 .. 4165077 + -10.8  -3.19602   CTGCAGGGCGATGCC              CGCCGC GTAGG GCGGCG              TCTTGGTGTAGCCCG  64 155
CWR60_RS19680 NONE
         fdx 4181688 .. 4181739 +  -3.4  -4.16681   CAGGAATAGATCGGG CCGCCGCAATTGCCGCAAAACGCA TGCA TGCGCCTGGCGCCGCTTGCGGCAA TTTTCAAATACTCTT  63 256
CWR60_RS19705 NONE
CWR60_RS19710 NONE
CWR60_RS19715 NONE
CWR60_RS19720 4188192 .. 4188219 +  -8.2  -3.78775   ATGACCTTGTCGGCG        TCCTCGCCCGCC AGCG GGCGGCCGCGGC         TTTGCTGGTGGCGCA  67 131
CWR60_RS19745 NONE
CWR60_RS19750 4196372 .. 4196424 +  -9.1  -3.85698   GTGCGGCTGCCGTCG CGCTTGACCACCGACG-GCATGGC CAGTTC GACGCGCTCGTAGGTGGTGAAGCG TTTGTCGCAGGACAG  70 360
CWR60_RS19775 NONE
CWR60_RS19780 4203134 .. 4203148 +  -4.2  -3.14931   GTCCAGCACGGTGTC               GTCGTC GTT GACCAC               TTCATCGAACGTGAA  45 266
CWR60_RS19820 NONE
CWR60_RS19825 4210840 .. 4210851 +  -5.8  -3.78022   CTTCAGTAGCGGTCC                CAGG CCTT CCTG                 TTTCATCCCTCTACC  60 183
CWR60_RS19835 NONE
CWR60_RS19840 NONE
CWR60_RS19845 4214712 .. 4214761 + -12.1  -2.57132   ATCGCCTCCCTGGCC GGTTCG-TCCATGCGCCGGGCG ACGCTCG CGGCCGGCGCATGGATCCGTCC ATTCTAGCGCCGCGC  64 444
CWR60_RS19865 4218896 .. 4218932 +  -5.1  -3.02144   CGTCATCAGTGTCAG    CATCGGCCGGTTGGT CGACAGC ACCAGCCCGTCTATG    TATTCCAGCCCCTGC  46 127
CWR60_RS19875 4222993 .. 4223021 +  -4.4   -3.2614   AGGCCACCGCGGTGC       CGCG-CGCGGCCG GCAC CATCTGCGTCGCG        TTGGTCTGCAAGGTG  47 226
CWR60_RS19895 4228931 .. 4228966 +   -24  -3.73224   ATTCAGAGCGATCAC    TTCGGCGGGCGCGCCT TGCA GGGCGCGCCCGCCGCA     TTTAGTAACAACTAA 100 47
CWR60_RS19900 NONE
CWR60_RS19905 4233476 .. 4233527 + -18.2  -2.83677   AGGCCGCCTATCGGC GCCATTTGAAATGGCTCGCGCCGAC GAG GTTG-CGGGGGCCATATCAAATGGC TGTGCTGAATTCATT  86 141
CWR60_RS19910 4234297 .. 4234319 + -20.6  -4.65895   TTAGCAGCACCTTAA           GCCGCCTGGC TCC GCCAGGCGGC           TTTTTCCGTCCCGCG 100 57
CWR60_RS19915 4235295 .. 4235317 +  -3.4  -3.30443   CATCGATTTCCGCCA           GCTCGATG CGATAGC CGTTGAGC           TTGATCTGGTCGTCC  47 341
         mpl NONE
CWR60_RS19990 4248200 .. 4248215 +  -2.4  -2.64354   GGGGCGCTCCTGACG              CCGCCG CGCC CGATGG               ATTCTCACTATGTAC  38 72
CWR60_RS19995 4250144 .. 4250163 +  -2.7  -2.76468   CGCCCTAAAATGCAC            GGGTGCG ACGCTC CGCTTCC             TCCTCTTCGATCCTG  40 61
CWR60_RS20000 NONE
CWR60_RS20005 NONE
CWR60_RS20010 NONE
        lptG 4253922 .. 4253936 +  -4.2  -2.87931   CTTGGAGAAAAGTTC               CTGCAT GAA AGGCAG               TATCTGGACCATAGG  43 18
CWR60_RS20020 4255244 .. 4255256 +  -4.7  -3.01712   CCGATGACCGGCCAG                GCGCG GAT CTCGC                TCTTGGCCACGAACG  46 510
CWR60_RS20055 NONE
CWR60_RS20060 NONE
CWR60_RS20065 4261981 .. 4262019 +   -16  -5.80951   GCCGCGACGGGCAGG   GCCCGGCCCATCGGATTG TTA CGATCCGATGGGCTTCGC   TTTTTTGTTTTGGAT 100 45
CWR60_RS20070 4264318 .. 4264330 +  -2.7  -2.80074   GGCGGTTGCAGAATT                TTCAT GTC ATGGA                TCCTCTTGTAAAAAC  39 516
CWR60_RS20135 NONE
CWR60_RS20140 4278080 .. 4278096 +  -9.3   -2.7185   CAGGCCGGCCACGCC              GGCGCCG GCC CGGCGCA              TAATTCCACCATGAT  55 41
CWR60_RS20145 NONE
        argJ NONE
CWR60_RS20155 NONE
CWR60_RS20160 4282617 .. 4282638 +  -3.7  -2.70932   CGCCACGCTCAGGTA           GT-CGATCAG CCC CTGCTCGTAC           TGGTTGCGCGCCAGG  40 222
CWR60_RS20200 NONE
        glpK 4300544 .. 4300580 +  -2.2  -3.53811   CACGCCGGCGCGCCG   GCCGCGGGGCTG-GCC AGCTGGC GGCGCAGCACCA-GGC   TTTGCGCGCCATGCA  50 138
CWR60_RS20265 4307262 .. 4307278 +  -2.2  -2.70932   CACGACACGCACGGA              GGCC AAGCATGAA GGCC              TGGTTGCGACAACAC  38 14
CWR60_RS20270 4308169 .. 4308182 +  -2.3  -2.76696   AGTGACCCGCAGTAC               GCGCT TTTA AGCCC                CTTGTTCCGCCGAAA  38 16
        cheD 4309325 .. 4309370 +  -6.2  -3.18264   CGGCGTGCTCCAGGT TGCCGCGGTTCAGCTTGGGC AGGATCGC GCCCA-GCTGC-TCGCGGTA TTGCTCGATCAGCGC  50 322
        mutY 4314064 .. 4314074 +  -3.2  -3.28924   CCAGCCTGAAGGTGA                 TCTG CTG CAGG                 TTCTGCCGCCCGCTG  47 95
CWR60_RS20305 NONE
CWR60_RS20310 4322638 .. 4322660 +  -8.4  -4.05714   CGCGGCTGAGCCCGC          GC-CGCCGG CCAGCC CCGGCGTGC           TTTATCATTGGCCCT  72 32
CWR60_RS20315 NONE
        thiD 4324422 .. 4324432 +  -3.2  -4.21462   GTTGACTCCTCTATA                 TTGG TTT CCGA                 TTTTCCGTCATGAAT  63 67
CWR60_RS20325 NONE
CWR60_RS20330 4326666 .. 4326706 +  -6.8  -3.05268   CGTGAAAAGAAGTCA CCGCGTCGACGCAGC CCAGGGCCGCCA GCAGCG-CGGCGCGG  TCTTGCACCTGATTG  48 246
        phoB NONE
        phoR NONE
CWR60_RS20375 NONE
CWR60_RS20380 4336849 .. 4336876 +  -2.7  -2.66316   ACAAACGCGTAATCC       GGGCGACAGACTG AGGT CAGTCC--CGCCC        TGCTATCGTCGGCCG  39 12
CWR60_RS20385 4337497 .. 4337509 +  -7.7  -3.78934   TGGTCCACAATGGGG                GGGTT TTC AACCC                TTGTTGTACAGGCAA  66 93
CWR60_RS20390 4338981 .. 4338996 +  -3.2  -3.73775   CCGTGGCGCACCAGA              TTGGCG ATGG CGTCGA               TTTCGTCGAGCTCGA  55 276
CWR60_RS20400 4340169 .. 4340200 +    -3  -3.09492   CAAGAACATAGAATC      CCTGTTTGCCAAGTA ACT TTCTTCGCAG-CAGG      TATTGCCGTTGACCG  44 10
        pxpB NONE
CWR60_RS20410 NONE
CWR60_RS20415 4342828 .. 4342878 + -16.2  -3.04144   AATACATAGAGCTCG CCG-CCGGACGACG-GCCGGTACGG CACG CCG-ACCGTCGCGACGTCCGGCCGG TATTCGCCGTGCGAA  78 151
CWR60_RS20425 NONE
CWR60_RS20430 NONE
CWR60_RS20435 NONE
CWR60_RS20440 4347763 .. 4347778 +  -6.8  -3.14132   AGGCGACGACCTGCG              CGGCTGG GGG CC-GCCG              TTCCTGAAGAACGCG  52 146
        ilvA 4356391 .. 4356410 +    -5  -3.28712   TCAGCTTGTTGAAGC            CATCGGGCG TAG TGCCC-ATG            TTCTGGCCCACGAAC  49 414
CWR60_RS20480 4358907 .. 4358945 + -16.6  -2.53715   CGATTTCATCCAGCC   GCGCCTGAACGCGGGCTG AGG CGGCGCGCGCTCAGTCGC   CTTCCTGGTACTGGC  77 7
CWR60_RS20525 NONE
CWR60_RS20530 NONE
        lptC NONE
        lptA NONE
        lptB 4371759 .. 4371772 +  -4.5  -2.79452   CAAACGTACACAATC               TTGCG CTAG CGCAG                CTTGTATTGGCCAAT  43 109
        raiA 4372292 .. 4372314 +  -9.9  -3.28924   TGAGCCTGCCCCCAT          CGTGATCCGG ACCA CCGGATC-CG           TTATCGCGACCGATG  63 68
CWR60_RS20555 NONE
CWR60_RS20560 4374078 .. 4374090 +  -4.7  -2.71144   CACGTCCAGCGGCGT                GACCG CGC CGGCC                TGGTTGCCCCAGCTG  43 177
        rapZ NONE
CWR60_RS20580 4378118 .. 4378163 +  -3.2  -2.70932   AACCCGGCGCGCACG GGCGGCGC-GGCTCAGGTAGCGG TGT CC-CT-CGTGGGCCAGCAGCGCC TGCTTGCGCGGCAGC  40 76
CWR60_RS20595 NONE
CWR60_RS20600 NONE
CWR60_RS20605 NONE
CWR60_RS20610 4382367 .. 4382379 +  -3.3   -3.6968   GGCGGCTTCCAGTTC                GCGGA ACT TCAGC                TTCTTGGGGTTCTCG  55 391
        argB NONE
CWR60_RS20625 NONE
CWR60_RS20635 NONE
CWR60_RS20640 NONE
        gatC NONE
        gatA NONE
        gatB 4397517 .. 4397563 + -13.7  -2.73875   CCTACACCCCGTACT TGCTCCGGTACGCC-TGCACCGC CGC GCGGTGCTCGGCGAACTGG-GCG TCGTCTTGCAGCAGG  69 123
         xth 4399392 .. 4399403 +  -7.2  -4.25104   AGCACAGGCTTTGCG                GCCG ATTC CGGC                 TTTTCGTCCGACGAA  72 314
CWR60_RS20705 4402627 .. 4402656 + -23.7  -2.78384   GTGCCTGTGCCGCAG       GGGTGCCTGTCCC CGCT GGGACAGGCACCC        TGTCATACGCCAAGA 100 52
CWR60_RS20715 4405198 .. 4405210 +  -4.7  -3.14132   GCGGCACGAGATTCT                GGTCG CCT CGCCC                TTGCTCGACGACGCC  47 421
CWR60_RS20745 NONE
CWR60_RS20750 NONE
CWR60_RS20755 NONE
CWR60_RS20760 NONE
CWR60_RS20765 NONE
CWR60_RS20770 4415361 .. 4415383 +  -4.8  -3.76482   GCGCGTAGCGCTTGC           CCTTGTCG CCTTCCT CGACCAGG           TTCTTGCTGGTGTCG  58 209
CWR60_RS20795 4421125 .. 4421163 +    -3  -3.04144   GGATGTCCAGCGCGC  GCAGGGTCACCGC-GGCC ACCGA GGCCAGCAG-GACCGGGC  TCTTCCAGCTGCCGG  41 412
CWR60_RS20805 4422445 .. 4422480 +  -2.4  -4.16842   GGCGGCCAGCAGCAG    CGCG-GCGCAGCCGG CCTGCCA CAGGATCCGCACGCG    TTTCTTGAGCATGAA  61 474
CWR60_RS20815 NONE
CWR60_RS20820 4425094 .. 4425127 + -14.5  -3.14132   ACAGGCGTATCGTTA     TG-GCTGGGCCGGCGC CGC GCGCCGGTCCGGCACC     TTCCTACCGGAGGCA  76 40
CWR60_RS20825 4426144 .. 4426177 +   -16  -3.01712   GCGTCGACCACGACA     TGGCGC-GGCGCGCC CAACC GGCGCGCCAGCGCGA     TATTGCGCGGCAGAA  78 506
        panB 4429881 .. 4429896 +  -3.2  -4.07568   TCCTGCAAACCCGCT              CCC-GCG CGC CGTAGGG              TTTTCGCCACGGGCA  59 253
CWR60_RS20850 4431312 .. 4431345 +  -3.1  -3.30658   CCCCCCGGGGCCGGC     CCTGCGAGGCATGC GAGTCCA GCGT-CCTAGCGGG     TGGTTTTTCCTCTCC  46 61
CWR60_RS20860 NONE
CWR60_RS20865 NONE
CWR60_RS20870 NONE
CWR60_RS20875 NONE
CWR60_RS20880 4437068 .. 4437114 +  -6.2  -3.18199   GATCGAACCGCTGCA GTAAACCGCGGCGTCCGCCGGC TTC GCCGGCGGACGCTGTCCACGCC TTGCCTTGCGCCTTA  51 22
CWR60_RS20885 4438948 .. 4438958 +  -2.4  -3.72576   GTAGTACTCGGGATG                 CGGC TGC GCCA                 TTTCGTCGGGCAGCC  51 499
CWR60_RS20895 NONE
CWR60_RS20900 NONE
CWR60_RS20905 4442276 .. 4442294 +  -8.1  -3.47227   CGCGTCGGACAGGCC            GGCGC-CG ATGC CGCGCGCC             TTGTCGTCCTTGCCG  58 199
CWR60_RS20930 4446832 .. 4446856 + -17.9  -4.74103   AGCGCCATGGAAAAA          GCCCTTCGGCG TAA TGCCGAAGGGC          TTTTTCCATTCCCGG 100 49
CWR60_RS20955 NONE
CWR60_RS20960 4453668 .. 4453695 + -22.8  -2.71144   GATGCGCGGCGGGAA        GGCGCCTGTCCC CACC GGGACAGGCGCC         TCCTTACCGGAAGTC 100 74
CWR60_RS20970 4455529 .. 4455541 +  -3.3  -3.14487   CCTGAATTTCACTTG                CCAAG TGA CTAGG                GTTTTCCCTATAGTG  44 91
CWR60_RS20975 4455951 .. 4455982 + -14.5  -4.15222   CTCGCGGCGCCGCTG      CGCTGCGTCTGGCC TGCCT GGC-AGACGCGGCG      TTTCTTCCGCCCCCT  89 149
CWR60_RS20980 4457784 .. 4457817 + -20.3  -2.71791   GTTCGTACCGTCCGC     GCGACAGGGGCGCCGC CAT GCGGCGCCCCTA-CGC     ATTTCAGCGGGCCGT  95 57
CWR60_RS20985 4458847 .. 4458874 + -16.2  -3.53012   CCAACCTATCTGACC        GGCCGGACCGGC GACG GCCGGACCGGTC         TTTCGAAGACCACCA  86 28
CWR60_RS20990 NONE
CWR60_RS20995 NONE
CWR60_RS21000 NONE
CWR60_RS21005 NONE
CWR60_RS21010 NONE
CWR60_RS21015 4465105 .. 4465116 +  -7.2  -3.61715   ACCACGTCTTCGCGC                GCGC GGCG GCGC                 TTCTTGCACCAGCTC  60 250
CWR60_RS21095 NONE
        folB NONE
        ttcA 4486113 .. 4486132 +  -3.4  -3.30124   CGTTCACATAACCCA            GGTGCGGC GTCA GCAGCACG             TTGTCCAGCGTGCGC  47 151
CWR60_RS21140 4491528 .. 4491540 +  -4.8  -2.87132   CCGAGATCGCGCGCG                GCGA AACCA TCGC                TGTGTGAGGCCGCCA  44 6
CWR60_RS21145 4492446 .. 4492471 +  -6.7   -4.7497   GAAGTGCAGCGCCAA         GCCCGGAACCCG TAA CTGGA-CCGGGC         TTTTTGCTGCATGCC  84 212
CWR60_RS21150 NONE
CWR60_RS21155 NONE
        trpD NONE
        trpC 4496527 .. 4496559 + -12.6   -3.8186   CCGGCCTCAGCGGCC     GCTGCCG-CGCGCCG GCGC CGGCGCGCCGCCCGC      TTCTTCCTTGCGATG  81 55
CWR60_RS21185 4499432 .. 4499445 +  -3.7  -3.00946   CTATCCTGACACCCC               CGGCG CCCG CGCCC                TACTTTCTCCGGAGA  44 32
CWR60_RS21190 4500512 .. 4500537 +  -5.3  -3.37796   CGGCGCTTGGGCCAC         GGCGCGCCGCTG CTA CGATGGC-CGCC         TTGTCCATCGTCCGC  53 85
CWR60_RS21195 4502047 .. 4502063 +  -2.2  -2.71712   CCGCCGGCGCCCCGG              GCCTGA GATAA TGAGGC              GTTTGCAACACACCC  38 52
CWR60_RS21200 4502944 .. 4502956 +  -3.3  -3.53811   CTGAGCCGCACGTTG                GCGTG CGA CAGGC                TTTCGGCCAGCTGCA  51 366
CWR60_RS21250 NONE
CWR60_RS21255 4513720 .. 4513764 +    -4  -2.78463   CTTTGGCGTCCAGGC CGGTATCCGGCGCGGCCAGC ACCAG GTCGCCCGCTTCGGACAGCG TCTGCTCGCGCCACT  40 210
CWR60_RS21280 4516003 .. 4516058 +  -3.1   -4.9792   CTGGCCCGCGCCTGC CCG-GCGGCGGGCCGTCGGCGC-TGGCG CGC CGGCAGGCACCGGTTGCATG-CGCACGG TTTTTATCTAGAATG  77 94
CWR60_RS21285 4517099 .. 4517128 + -14.2  -3.28712   CAGGACGATGCCGAC       GGCCTGCTCGGC GTGGTG GCCGGGCTGGCC        TTCTGGCAGGGCGCC  75 507
CWR60_RS21295 NONE
CWR60_RS21300 NONE
CWR60_RS21305 4522232 .. 4522284 + -16.9  -3.05844   CTGCTGCTGGCGCTG GGCGCTGCCTTGCTGGCGGTGGC CGTCCTC GCCGCCGCCAGCGGCGCGGTGCA TATTCCGCTGGCCGA  82 60
CWR60_RS21310 NONE
CWR60_RS21315 4524292 .. 4524319 + -14.8  -2.71712   CGCCAGGCCGTCGAG        CACCG-CGGCGCC CCC GGCGCCGGCGGCG        ATTTCCGCCGGCGGA  70 329
CWR60_RS21325 NONE
        alkB 4526005 .. 4526021 +  -9.3  -2.52464   GCATCAACTTCACGC              TGCGCCG CGC CGGCGCC              TGAATTCGGCCGCAA  54 6
CWR60_RS21335 4526626 .. 4526636 +  -8.2  -3.53012   GCTGTTGCGCGAGGC                 CGGC TGA GCCG                 TTTGCAACGCCGGCA  62 19
CWR60_RS21340 4528190 .. 4528207 + -12.7  -3.05463   CGTCGCGATGCTCGG             GCCGGCT GACC AGCCGGC              TTGCGTAGCGCCCCT  66 346
CWR60_RS21360 NONE
CWR60_RS21365 4533293 .. 4533305 +  -3.4  -3.84246   GACGCCGGCACGCTG                GGAA ACACC TTCC                TTTCGTGGTTGAGCC  58 235
CWR60_RS21380 4536605 .. 4536625 +  -8.1  -3.14468   GTGGACCTCGACGAC            CAGCGTGCC GTC GGCCCGCAG            TTCGATGTCCTCGCC  53 313
CWR60_RS21395 4540310 .. 4540328 + -10.2  -2.79183   TCGCTGAACAGGGCC             TCGGCGCG GAT CGCGCTGG             TGTGCTGCAGCTCCA  56 483
CWR60_RS21405 NONE
CWR60_RS21410 NONE
CWR60_RS21415 4543675 .. 4543687 +  -6.9  -3.14931   AGGTGTCGCTGATCA                GGTCG GCG CGGCC                TTGCTCGACCGTGGC  50 272
CWR60_RS21435 4548485 .. 4548497 +  -4.7  -4.15106   GGGACAGCCTCCCTA                ACCGG CCG CCGGC                TTTTCCCGCTTACTC  62 139
CWR60_RS21445 4551219 .. 4551233 +  -2.1  -3.17075   CAATAAAGCACCTGG              C-AGGC AAAG GCCTCG               TTGAGTTCCCACAGA  43 267
CWR60_RS21465 NONE
CWR60_RS21470 NONE
CWR60_RS21475 NONE
CWR60_RS21480 NONE
CWR60_RS21485 4563856 .. 4563875 +  -7.1  -3.17212   ATGACAGCGCGCCCA            GCAGCGGC AGCGA GCCGC-GC            TTGGTGGCGTAATCC  53 159
CWR60_RS21530 4572868 .. 4572891 +  -9.4   -3.1372   AGGCCTTGATGTCGT          GCGCCAGCGC TTCG GCGCCGGCGG           TATTGGTGGCCAGTA  59 220
CWR60_RS21560 4577119 .. 4577136 + -12.7  -3.21218   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  69 86
CWR60_RS21590 4582686 .. 4582728 +   -14  -3.23853   CGCCGGCGCCGAATC CTCCGAGGCCGTGCTGGCGG CGG CCGCCGCCGCGGCTTGCGAG TATTGCTTCCACACC  75 233
CWR60_RS21600 4586293 .. 4586304 +  -2.2  -3.38046   GCAAGTTTTCGTATT                CTTG ACGG CAGG                 TATTTGCCATCAGGA  46 117
CWR60_RS21605 4587888 .. 4587935 +  -6.1  -4.63218   GCGGTCTGTCTTGCA TGCGCGG-GCGCCG-CGTACGGC GTCA GGCGGGGGTCAGCGCACCGCGCA TTTTCTTCAGCGCCG  78 363
CWR60_RS21630 4592625 .. 4592654 +  -9.2  -4.25104   CGGGGCGTTGCATGC       TGCCCACCCGAC CCCTGT GCCGCGTGGGCA        TTTTGCTGCGCCCGC  80 55
CWR60_RS21635 NONE
CWR60_RS21640 4599394 .. 4599407 +  -3.8  -2.71712   AACGCAGATGGAGAT               CGTG CATGTA CACG                CTTTACCGGCAGGGC  41 265
CWR60_RS21645 4600017 .. 4600031 +  -7.8  -3.28712   TGGGTCGCCACCGTG               GCGGTG GGC TACCGC               TTCTGAGGCGCCCGC  56 5
CWR60_RS21650 NONE
CWR60_RS21655 NONE
        mlaE NONE
        mlaD NONE
CWR60_RS21670 4604293 .. 4604311 +  -5.2  -4.72386   GGCCACCGCCCGATT             CGCAAGGA GAT TTCATGCG             TTTTTCCATCGTTTC  81 45
CWR60_RS21675 4604979 .. 4605008 +  -2.7  -4.13561   CATTGCCCGGCAACG       GCGAGGCCCCC TCTATAAT GGGGAATTCGC        TCTTTTTTCCGGGCA  59 74
CWR60_RS21680 NONE
CWR60_RS21685 NONE
CWR60_RS21690 NONE
        murA NONE
CWR60_RS21700 4608852 .. 4608873 + -18.7  -2.61274   CATCGCCTGAACCCC           GCCGCCCGC GCCG GCGGGCGGC            CTTCCTTGCAGTACC  87 31
        hisD NONE
CWR60_RS21710 NONE
        hisB 4611862 .. 4611876 +  -4.9  -2.62184   TGGGCGATGCCGTGC               CGTCC ACCAA GGGCG               TGCTGTAACGCCCCG  42 3
        hisH 4612607 .. 4612619 + -10.5  -2.60615   AAACGCCTGTCGCGA                CGGCC TTG GGCCG                ATATTTCCAACGACT  57 39
CWR60_RS21725 NONE
        hisF NONE
        hisI NONE
CWR60_RS21740 NONE
CWR60_RS21745 4615313 .. 4615328 +  -2.4  -2.90496   TCCCTGGAAAGGCCG              CGTGGC TCCC GCCGCA               TAATTTCGGAGAACC  40 7
        tatA 4615585 .. 4615610 + -12.6    -3.889   CCTAGTCCCGGCCCG         GGACCGGC-CC ATGAC GGCGCCGGTCC         TTTCCTATCGTTCCA  81 36
        tatB NONE
        tatC 4616939 .. 4616964 +  -5.3  -2.52676   AAGTAGACGGTTTCA         CGCTTGCCGCGG CCG CC-CGGCATGCC         TACATTGCCGGCATG  44 65
CWR60_RS21765 4617648 .. 4617675 +  -7.6  -3.10344   TCGATGCCGAACCAG        CCGCGCCGCACGG CGC CCGTGCG-CACGA        TGTCTTCCATCACGC  52 340
CWR60_RS21775 4619378 .. 4619404 +  -7.9  -3.23853   GTGACATCTTCCGGC        GGC-GCGGCGGG CGCT TCCGGCGCGGCC         TCTTCCTTGCGGCGG  53 114
        petA NONE
CWR60_RS21790 NONE
CWR60_RS21795 4622972 .. 4623003 + -18.8  -3.94846   CCGCCTGGCAATCGG      GGCCAGCGCCTGCTA ATT TGGC-GGCGCTGGCC      TTTCGCTTTTCATAC 100 123
CWR60_RS21800 NONE
CWR60_RS21805 4624156 .. 4624170 +  -8.5  -3.07816   TGCAGTCCCTCGCAA               GCGGC CATGC GCCGC               TTGCGTCCATGCCGG  55 78
CWR60_RS21810 4624291 .. 4624306 +  -3.2  -3.57144   CATCCCCGCGGAAAC              GCCC AGAATCGC GGGC               TTTACACCTGCGCCG  49 60
CWR60_RS21835 4628814 .. 4628842 +  -6.6  -3.28712   TGAAAACGCCCTTGG       CCGCGACG-TCCC TGGC GGTCCCGTCGCGG        TTGTCGCGCAGGCGC  52 279
CWR60_RS21845 4630692 .. 4630716 +  -2.7  -3.05816   CCTTAGGCGCGCGGC          ATGGCAATCGC GTT GTGATCGCCGG          TTCGATCACAGATAC  42 79
CWR60_RS21850 NONE
CWR60_RS21855 NONE
CWR60_RS21860 NONE
CWR60_RS21865 4635476 .. 4635532 +  -6.6  -3.14051   TACCCGCCGGGCGTG CCCGACCATTCGACCGGCGGCGCGGT CGTGCGT ATCGTGCCTTCGGTGGGATG--CGGG TGTTCCTGGAAATAA  50 237
CWR60_RS21885 NONE
CWR60_RS21890 4640263 .. 4640278 +  -6.8  -2.62184   GCGGCAGCGGCGATC              TGCAGG AGTA CCTGCG               TCATGTGACGCGCGG  47 267
CWR60_RS21900 NONE
CWR60_RS21905 4641569 .. 4641579 +  -3.2   -2.7806   GATATTGCGAATGAA                 CTCT TCC GGAG                 GTTTCGACGTTTCCG  40 27
CWR60_RS21910 4642329 .. 4642347 +  -6.6  -3.08813   CGGCAGCGTCGATAT             GCTGAGCC GCC GGCTCGGA             TCTGTTCGCCTGCCC  51 21
CWR60_RS21915 NONE
CWR60_RS21920 NONE
CWR60_RS21925 NONE
CWR60_RS21930 NONE
CWR60_RS21935 NONE
CWR60_RS21940 NONE
       virB9 NONE
CWR60_RS21950 NONE
      virB11 4650712 .. 4650722 +  -2.4  -4.29396   ACGCCTGCCGCCTGC                 ACGC ATT GCGA                 TTTTCGTGCATAATT  62 40
CWR60_RS21960 4650841 .. 4650862 + -15.9   -4.7497   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC 100 37
CWR60_RS21970 NONE
CWR60_RS21975 NONE
CWR60_RS21980 NONE
CWR60_RS21985 4656232 .. 4656264 +  -5.4  -3.02043   ATGTGCCTGCTTGCT      TTGCGCACCGGCGT CCATC GCGCCGCGCCGCAA      TCTTCCCACCGCCTT  47 209
CWR60_RS21990 NONE
CWR60_RS21995 NONE
CWR60_RS22000 4659966 .. 4659986 +  -3.9  -3.63515   CCCTCAACCCCAAGC            TGCGCTGAG ACG CTCATGGCA            TTGTTGGACATCGAC  54 18
CWR60_RS22005 4662160 .. 4662206 + -10.7  -3.41693   GCCGTGACGCCGGCC TGCACCGCGCCGGGCCAGTCGC CGGC GCG-CAGGCGCGGCACGATGTA TTCATTGATGATGCG  69 483
CWR60_RS22020 NONE
CWR60_RS22025 NONE
CWR60_RS22030 NONE
CWR60_RS22035 4668068 .. 4668089 + -17.3   -4.7373   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG 100 48
CWR60_RS22050 4671096 .. 4671136 +  -8.8  -3.05715   AACTGGAGATCGCCC AGCGTAG-CCGCGCCCGCG TCCA CGCAGGCGCGGACTTGGCG  TTCGGTAACGGCATT  55 264
CWR60_RS22065 4673395 .. 4673414 + -16.4  -3.85165   CCCGGACCGGCCTGA            CGGCGCGC CCTG GCGCGCCG             TTTACATTTGCGCTG  91 55
        leuA 4675908 .. 4675936 + -16.7   -3.1372   CCACTTTCGCGCGCG        CCTGCCCCGCCTG CGC CAGGTGGGCCAGG        TATTGCTCGGCGGTC  80 435
CWR60_RS22080 NONE
CWR60_RS22085 NONE
CWR60_RS22090 NONE
CWR60_RS22095 NONE
CWR60_RS22100 NONE
CWR60_RS22105 4682697 .. 4682718 + -10.8  -2.84325   GACGAGTGAAACAAG           CGCCGCCG CTGACA TGGCGGCG            TCATGTTTGCACCGC  61 32
CWR60_RS22110 4683814 .. 4683828 + -12.8  -3.48276   GACAGCATTTCTTCG               CCGCCG ACG CGGCGG               TTCTGTGAACCACCG  73 3
CWR60_RS22115 4685180 .. 4685218 +  -2.3  -3.13403   CAAGTGATGCGCAGC  GCA-TGAGCCGCACGACG CAAG CGGTGTACGGCTGGCTGC   TGTTGCTGCCAGCCG  42 34
CWR60_RS22120 NONE
CWR60_RS22125 4687052 .. 4687089 + -19.1  -2.93901   AGGCTCCCCAAAGTT   TGCGGGAGCCAGTCCCC CTGC GGGGACAGGCTCCCGGG    TATGGTTAATGGCCT  89 223
CWR60_RS22140 NONE
CWR60_RS22145 4690534 .. 4690548 +    -7  -2.90714   CGCCATGGAACTTCC               CCGCGG CAT CCGCAG               TCTGTAACGCTTTAA  50 43
CWR60_RS22150 4691242 .. 4691261 + -11.4  -4.08144   CCCCGACGCCACAAA            GCCTCCGT CCAT GCGGAGGC             TTTGTCGTTGATGGG  82 60
CWR60_RS22160 4693313 .. 4693357 +    -2  -3.17723   CGCGCCCGCTACGCC GC-CTGGAAACGCA-CGATGCC GTC GGCATCGGTGCGGCGCTTGAGC TTGCCTTCGAAATAC  42 56
CWR60_RS22170 4694879 .. 4694898 +    -8  -3.38522   AAACCCGACTCAACT            TTACGTTT ACGT AAACGTAA             TATTTGCGCTGCATC  59 91
CWR60_RS22175 NONE
CWR60_RS22180 NONE
CWR60_RS22185 NONE
CWR60_RS22190 NONE
CWR60_RS22195 4703033 .. 4703071 +  -6.7  -3.14931   ATCGAAGTGAAGTGA  AG-TGA-ATGACGCCGGGC GCG GCCCGGCGTCGGGTCAGCC  TTGCTCCGGCGTGAC  52 26
CWR60_RS22210 4706020 .. 4706046 +    -5  -3.44622   CAATACATACAGGCT         TGGTTCGAAGCG CAG CGTCTCGGCCCA         TTCGTTGTCGCCATA  51 369
CWR60_RS22220 4708055 .. 4708067 +  -6.2  -2.64155   CGTCCCGACTCCAAT                GCGC CAATC GCGC                TGCCTTTCCGCCAGG  46 70
CWR60_RS22225 4710192 .. 4710221 + -20.9  -3.28712   CGGGCGCCGACGCAA       TGCACAACCCACC GCAA GGTGGGTTGTGCA        TTCTGGACGCGGCCG 100 59
CWR60_RS22235 4713350 .. 4713385 + -16.8  -2.70525   GATGCGGCCGCGCCA    GACATGGCGCGCCGGC CCGT GCTGGCGCGCCATCGC     ATTGATTTCCGGAAC  80 39
CWR60_RS22240 4714610 .. 4714622 +  -5.5  -3.14468   CATCGGCCGGCCTGT                CGTTG CGC CAGCG                TTCGATATCCTCGCC  47 323
CWR60_RS22250 4719666 .. 4719710 + -10.7  -3.50853   GCGCCGCATCCTGCC CGTACCCGCGCCGCG-CGGTC CACGC GACCGACGCGGC-CAGTTGCG TTATCGTTGCCGCAA  70 80
CWR60_RS22255 4720812 .. 4720822 +  -8.2  -2.82635   GCGATTCGTGCGCAA                 GGCC CGG GGCC                 TGTGATGATCGAGCT  54 10
CWR60_RS22260 NONE
CWR60_RS22265 NONE
CWR60_RS22270 4723269 .. 4723285 +  -3.5  -3.05715   GATCCTGTCCGACCC              GCGAGGC TGC GCACCGC              TTCCGTGCAGGACTT  44 39
CWR60_RS22275 NONE
CWR60_RS22280 NONE
CWR60_RS22290 4728223 .. 4728239 +  -5.7  -3.28712   GATCGCGCGCCAGCG              CGGCCAG CGG CAGGTCG              TTCTCGGCCAGGCCG  52 137
CWR60_RS22300 4729955 .. 4729966 +  -3.6  -3.72989   GCGCTTACGCGCCTG                CGCG GTAT TGCG                 TTTGGCTGTCGATTT  54 325
CWR60_RS22305 4731112 .. 4731131 +  -9.2  -3.29144   CCAGCGCACGGCCGG            CCAGGCTC CCGG GCGCCTGG             TTGTCCAGCGGATAG  59 416
CWR60_RS22355 4739486 .. 4739504 +  -5.8  -3.78775   CCGGCCGCCTTGATC             ACGCCCGC ATT GCGGGCCA             TTTCCTGCTCGACGC  61 70
CWR60_RS22370 4742763 .. 4742784 + -15.9  -3.64703   CGCCCCCAAGCAAAA           GAGGCTGCC TCAC GGCAGCCTC            TTTGCGTACGACGGC  85 95
        rpmH 4748398 .. 4748414 +  -2.1  -2.78384   CCGCCGCGCCAAGGG              CCGCAAG CGT CTGGCCG              TCTAATCCAGGCGGA  38 4
CWR60_RS22395 4748871 .. 4748915 +  -2.8  -4.12902   AGATGCTCACTTCAC ACGGAT-AGCGCGATGATCAG GAGA CTGCTTATCGCCCCGATCCGG TTTTACCGGTACTTC  59 10
        yidD NONE
        yidC 4750913 .. 4750932 + -16.4  -5.88471   GAGCCAGCCACGAAA            CGGCGCCC TGCG GGGCGCCG             TTTTTTTTCGTCCTG 100 43
CWR60_RS22410 4752699 .. 4752718 +  -2.8  -4.07568   GCACCGTCACGCGCT            CCAGCGTGT CGA ACAC-CAGG            TTTTCCACAGCCAGG  58 125
        mnmE 4765133 .. 4765151 +  -6.7  -2.62184   CCGCGCCGGCGATGC            GGCC-CAC GATC GTGCGGCC             TGCTATCGCGCAGCC  47 398
CWR60_RS22475 4767241 .. 4767254 +  -2.3  -3.29947   AAACCCGCCATCGCA               CGCTG AAGA CGGTG                TTGCTGTGGTGGCTG  44 49
CWR60_RS22480 4768716 .. 4768730 +  -5.7  -3.06183   TCATCCGTTGGCCTG               CGATC TGCGC GATCG               TTCCATGGCCATCCA  47 74
CWR60_RS22485 4769799 .. 4769831 + -18.4  -3.02144   AAGAAGTAAACCGAT     CGCGCGGCCGGCGGC ATGC GCCGCCG-CCGCGCA      TCTTCCCAACGGTGC  90 32
CWR60_RS22490 NONE
CWR60_RS22495 4771875 .. 4771896 + -15.9  -5.06414   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 46
CWR60_RS22505 4773705 .. 4773716 +  -7.2  -4.58395   TCGCCCGCTCTGAAT                CGGG AAAT CCCG                 TTTTTCCCGCATACC   0 28
CWR60_RS22500 4771875 .. 4771896 - -15.9  -4.65895   CGGCCGATTGAAAAA           TGCCGCGGT TCGC ACCGCGGCA            TTTTTCTTGGGCGCA 100 59
CWR60_RS22470 4764413 .. 4764427 -  -5.7  -4.15788   AACGTCTTCAACAAA               GTCGA TCTGC TCGAC               GCGGCGTTCCAGGGC  69 303
CWR60_RS22460 NONE
CWR60_RS22455 NONE
CWR60_RS22450 NONE
CWR60_RS22445 NONE
CWR60_RS22440 4757740 .. 4757752 - -10.5  -2.78384   GTTTCTTTTAGCACA                GCGCG CGG CGCGC                TCAGGCCTGCTGCGC  57 26
CWR60_RS22435 4756371 .. 4756391 -    -9  -3.12999   GCATGGGACATGGAA            CCGCTCCT TGTTC AGGAGCGA            TCCATTATGAAAACG  59 130
CWR60_RS22430 4755450 .. 4755460 -  -8.2  -2.57344   GACGCGCGTCAGAAC                 GGCG CGT CGCC                 TTCGATCGTGGTGCG  52 8
CWR60_RS22425 4754342 .. 4754355 -  -2.4  -2.86676   CCGAGGAATCGAAAC               GATG CGCGCC CATC                TTAGCTTCCCTGCGC  40 26
CWR60_RS22420 NONE
CWR60_RS22415 4752623 .. 4752652 - -22.9  -3.48593   GACGCCGCGACACAA       GGCGGCCGCGCCCG CAA CGGGC-CGGCCGCC       GGCGGCATTCAGCGC 100 34
        dnaA NONE
CWR60_RS22380 4745289 .. 4745302 -  -2.3  -5.03145   TAACGCCTTAAAAAA               CAGCC TCAC GGCCA                CACCGTTCGCGCGCG  79 81
        gyrB 4742763 .. 4742784 - -15.9   -4.4078   CGCCCCCAAGCAAAA           GAGGCTGCC TCAC GGCAGCCTC            TTTGCGTACGACGGC 100 51
CWR60_RS22360 4739414 .. 4739444 -  -6.1  -4.63932   CAGCTTCGAAGAAAA       GCGCTACAAGCAC TTCGC GCAGCTGTAGCGC       CACGCCACGGCTATT  78 36
CWR60_RS22350 NONE
CWR60_RS22345 4736878 .. 4736891 -  -9.5  -3.26471   CTACGGCCATAGTAA               CCGGG CCGG CCCGG                GCGGGCCTGCAACGC  61 40
CWR60_RS22340 4735056 .. 4735070 -  -2.1  -3.15544   GCGTATGTTCATCAA              GCGATC CTTG GA-CGC               GGCTATACGCCGGCC  42 28
CWR60_RS22335 4734599 .. 4734611 -  -4.7  -3.02511   CCCATCCGCGCAACA                GCGTG TCT CGCGC                CCTCTAGCCGTCCAG  45 29
CWR60_RS22330 NONE
        panE 4732586 .. 4732598 - -10.5  -2.51312   AATCTACGCATCAAT                GGCGC GTT GCGCC                TGATACGCCTGCAGA  56 1
CWR60_RS22320 4731807 .. 4731842 - -10.3  -3.92373   CAGTTTACCGAGAAA    GGCCCCGGCCG-GGCA TGGTC CGCCACGCCCGGCGCC    GCTGGCTCAATAACC  77 32
CWR60_RS22315 NONE
CWR60_RS22310 4730629 .. 4730646 -  -8.3   -3.9122   TACGCCGCCAAAGAA             GGCCTGG TCGC CCTGGCC              ATCGACGAACTGGCG  70 114
CWR60_RS22295 4727959 .. 4727979 - -13.3  -2.96692   TACGATTACTACATA            CGCATCGCG GTA CGCGATACG            CGCGATTACGAGCGG  68 174
        ilvB 4725656 .. 4725686 -  -7.4  -3.01791   AGCTGCCCGCCAAGA       CGGTATCTGTCCCC GTG GGGGACAGGCGCCC       GGGATCATGCCTGCG  53 30
CWR60_RS22245 4713881 .. 4713934 -  -9.4  -3.25823   CTGGGGCCACAGCAA CAGGACGT-GGCGGCCGCGGTCGGCG ATTT CGCCCTGCGCCGC-GCCGACGGCCTG TGGGCCTACCAATTG  59 390
CWR60_RS22205 4703297 .. 4703318 -  -4.3  -3.05596   GACGCCGGGACGGAA           GTCCTGCAT CGCC ATGCCGGTC            CCGTCCTTACTTGCG  45 32
CWR60_RS22200 4703039 .. 4703063 - -17.1  -3.20991   GTGAAGTGAAGTGAA          TGACGCCGGGC GCG GCCCGGCGTCG          GGTCAGCCTTGCTCC  84 28
CWR60_RS22165 NONE
        metC 4691242 .. 4691261 - -10.7  -3.89346   CCCCGACGCCACAAA            GCCTCCG TCCATG CGGAGGC             TTTGTCGTTGATGGG  77 53
CWR60_RS22135 NONE
CWR60_RS22130 4687049 .. 4687092 - -10.8  -3.54129   CACAGGCTCCCCAAA GTTTGCGGGAGCCAGTCCCC CTGC GGGGACAGGCTCCCGGGTAT GGTTAATGGCCTACA  70 28
CWR60_RS22075 4675555 .. 4675584 - -17.9  -2.62616   GCATGGCGTACAGCA       GTGTGCCTGTCCC GGCG GGGACAGGCACCC        TTGCCGCAGGAGTCG  85 80
        rpoN 4671268 .. 4671283 -  -6.2   -3.6003   GAAATCAGGGGCAAA              TTAGGA GGCG TCCTAA               CGACCCGCGGCGTGG  56 22
CWR60_RS22055 4670840 .. 4670871 - -20.2  -3.96148   TGTGGGGACGATAAA      TTGCGCCAGGCGGC ATGA GCCGGCTGGCGCAA       GGCGCCGCGTCGCTC 100 39
CWR60_RS22045 4668633 .. 4668663 -  -8.4   -3.5525   AGACAGGCGCGTAAA      GCTGGCGCGCAGTG ACGCG CA-TGCGC-CCAGC      ACATACGCAACCCCG  62 304
         bfr 4668068 .. 4668089 - -17.3  -3.75629   CAGCCGCAATGCAAA           GGGCGCACC GCAT GGTGCGCCC            TTTTTCATGCCATGG  91 63
CWR60_RS22015 NONE
CWR60_RS22010 4661593 .. 4661604 -  -3.6  -3.55622   GCCAACTGCTGGAAA                CGGC GGCC ACCG                 AGACCCTGTTCACGC  51 130
CWR60_RS21965 4650841 .. 4650862 - -15.9  -3.91144   GCCAGATTCCAGAAA           GCCCGGTTC ATGC GAACCGGGC            TTTTTGCTGCCTGCC  91 66
CWR60_RS21880 NONE
CWR60_RS21875 NONE
CWR60_RS21870 4635296 .. 4635327 - -15.9  -4.25104   GTCCCCGCAGGAAAA      CCGGTGCCTGTCC GCGCGG GGACAGGCACCCG       GGCCGGCGCTCAGCC  95 35
        trxB 4628257 .. 4628300 -  -6.5  -3.17075   GCCCGCCGAACCCAA TGCCCTGCGGGTGCTGC TGGACGCGGT GCTGCGCCCGCACGGCC TGGCGCTGCACCCCG  50 291
CWR60_RS21830 NONE
CWR60_RS21825 NONE
CWR60_RS21820 4624647 .. 4624658 -  -2.2  -3.30701   CTCTACGAAAGCGAA                GACG GCAC CATC                 ATATCGCCTTGCGCC  44 45
CWR60_RS21815 4623827 .. 4623872 -  -5.3  -3.71848   GCTGGCCACCAACAA GCTGTCGCTGGGCAACGAATTC ATC GAATTCCAGGCCC-GCTTCAGC GGCGTCACCGAAAAC  58 461
        mscL 4618848 .. 4618860 -  -6.2  -3.63569   GCAATGGGGCAACAA                CGCC CAGCT GGCG                CGCGTGCTGGGCCTG  57 479
CWR60_RS21770 4616986 .. 4616998 -  -7.7  -3.09516   GCCGGCATGAGCCAA                GCAGA CCG TCTGC                GCGCCTTGATGCGAT  52 371
CWR60_RS21625 NONE
        fghA 4589672 .. 4589703 -  -4.3  -4.08706   CGCCCAGTATATAAA      GCGGCCCGGGC CCGGCCTGTT ACCCCAGCCGC       TCGACGTGAAACCGG  62 13
CWR60_RS21615 4588893 .. 4588912 -    -2  -3.53012   CTGCGCCGCGCCAAA            GTTCCGGA ATTT CCCAGTAC             GCAGGATATTTTCCC  48 54
        rpoH 4587861 .. 4587880 - -13.6  -5.75342   GGGCCCCAAAAAAAA            CAGACCGC CGTA GCGGTCTG             TCTTGCATGCGCGGG 100 55
CWR60_RS21595 4582165 .. 4582180 -  -8.2  -3.66666   GCGAAAACCTGGAAA              CCGCGC TGGT GCGCGA               ATGCGGCGAAGAAGC  63 513
        coxB 4580204 .. 4580236 - -13.4  -3.22858   CCAACTACAGGAACA     GCAGCGG-GGCGCGC TTCA GCGCGCCGCCACCAC      GTCCTTGGGTTGGAC  73 8
        ctaD NONE
CWR60_RS21575 NONE
CWR60_RS21570 NONE
CWR60_RS21565 4577119 .. 4577136 - -12.7  -3.33696   CTGCCGGCGAACGAA             TGCCCCC TTGC GGGGGCA              TTCGTCGTCAAGGCT  71 57
CWR60_RS21555 NONE
CWR60_RS21550 NONE
CWR60_RS21545 NONE
CWR60_RS21540 NONE
CWR60_RS21535 4572629 .. 4572664 -  -9.6  -3.06796   GCCGAGCTGAGCCAA    GCCGCCC-GCGCCGCCT ACC AGGCGTGGCTGGACAGC    CGGAAATAAGGCGCG  57 206
CWR60_RS21525 4571579 .. 4571594 -  -2.4  -4.07885   CAGCCCCTGCCAAAA              CGCCGG ATGA CCTACG               CCGCTGGCCGCAAGT  58 111
CWR60_RS21520 4570678 .. 4570692 -  -2.8  -2.95789   ACTACATTAAGCATA               GAAATC TGA GATATC               CAAAGTCAGTAAACG  42 84
        glmU NONE
CWR60_RS21510 4567828 .. 4567859 - -10.8  -3.04322   TGCAACCTCGCAATA      CGCGGCGTCAGCGGA CCA TCCGCCG-CACTGCG      GGCATTATAGAAGTA  62 87
CWR60_RS21505 NONE
CWR60_RS21500 4565205 .. 4565260 - -17.4  -3.80573   TCCAGCACCAGGAAA GCGGCGCCGGTATCGGCCTGGAAGGC GTGC GACTCGCCGGCCGGTACCAGCGCCCC CCAGGCGCCGGTCAC  95 194
CWR60_RS21490 4563323 .. 4563335 -  -6.2  -3.08133   CAGCCAGGCATCGAA                GCGG GAGGG CCGC                GAGGTCTGCACGCTG  48 409
CWR60_RS21455 NONE
CWR60_RS21450 4550665 .. 4550720 -  -7.4  -4.18197   AGGCGTGATCGAAAA GCA-GGTGGCCATCGTCGCGCCGGCCA AGG TGGGCAGCACGCTGACGGCCATCGTGG AAATCACGCTGGACG  73 304
        glmS 4548393 .. 4548424 -   -10  -2.62184   GCCTGTCCCACATGA      GGACTGGCACCTGC CCGT GCGTGTGCCTGTCC       CCGCGGGGACAGGCA  57 108
CWR60_RS21430 NONE
CWR60_RS21425 NONE
CWR60_RS21420 4542983 .. 4542998 -  -6.8    -3.767   CATCGATGGACGAAA              GCGCCGC CCT GCG-CGC              CTTCCAGGACGCATT  61 466
CWR60_RS21400 4539533 .. 4539565 -  -8.4  -2.78495   GGACCAGCAACATCA     GGCTGCTGGCCGTCA CGTC CAAC-GCCCGCAGCC      CGGCCTTTCCCGATG  52 328
        ctaD NONE
CWR60_RS21385 4535850 .. 4535882 -  -2.5  -3.76952   CGCATCGAACCGAAA      CGCGGCGCCCAAG TGGTGGC CCTGTCCGCCGCC      GATATCCGCGAAGCC  53 493
CWR60_RS21375 NONE
CWR60_RS21370 4533085 .. 4533119 - -12.1  -3.05384   CCCGGCTGGATTGAA    CGCG-GCGGCGCCG GAACGAAA CGGCGCCGCGCCCG     CCCGCGCCTACCCGG  67 33
CWR60_RS21355 4530116 .. 4530153 -  -4.8  -3.36492   CGCGCAATTTGAGAA  GCGGCGCGTGGC-GCTCA GGCG TAGGCCGCCACCCG-CGC   AATGCAGCGATGCAA  51 2
CWR60_RS21350 NONE
CWR60_RS21345 4527521 .. 4527543 -    -9  -2.71681   CAAGTCGGTCAACGA           CACCCACGGC CAT GCCGCCGGCG           ACCGGCTGCTGCGCG  52 361
CWR60_RS21320 4523817 .. 4523827 -  -2.4  -2.82519   GCATGACATCAATCA                 GGCG GCG CGCT                 GGTGCGACACGCTGG  39 190
CWR60_RS21275 NONE
CWR60_RS21270 NONE
CWR60_RS21265 NONE
CWR60_RS21260 4513520 .. 4513550 - -10.4  -2.95751   GCAGCAACAGAACCA      GCCCTCG-GCGGC CTGAGC GCCGCGCTAGGGC       GCCGGCCAGCCGCGC  60 19
CWR60_RS21240 NONE
CWR60_RS21235 NONE
CWR60_RS21230 NONE
CWR60_RS21225 NONE
CWR60_RS21220 4505482 .. 4505510 - -10.1  -4.11216   GCGGCATGCCGAAAA        GCGCGCCGCCGCG GGC CGCGCCGGCAAAC        CCCGCCGCTTGTTGC  78 94
CWR60_RS21215 NONE
CWR60_RS21210 NONE
CWR60_RS21205 4502489 .. 4502519 -  -8.8  -4.63932   CAGCCTGGAAGAAAA       GCAGCGCTTCGAGG CCG CCAAGCAGCGCCGC       CTGCTGCGCCAGGAA  83 116
CWR60_RS21180 NONE
CWR60_RS21175 4497465 .. 4497487 -  -2.5  -3.14848   CGTCGGCAGGAAAAG           CGGATGGGA TCAGG CCCCGGCCG           GCTGCGGGCGGGCGG  42 42
CWR60_RS21170 4496584 .. 4496610 - -12.2  -3.65902   GCGATGCCAGTGAAA         CGCGACGCGC CGGATGC GCGCGGCGCG         AAACTGCACTTGCGA  77 88
        apaG 4490306 .. 4490336 - -10.3  -4.13945   ATGCGGATCGGAAAA       TCACCGTGCCGGG AGGAG CCCGGCTCAGTGC       AGTGTACGCGGCATG  78 19
CWR60_RS21130 NONE
CWR60_RS21125 4487822 .. 4487849 -  -5.5  -3.04398   CCTGCTCCTGAAAAC       GGCGGCC-CGCTC AATT GCGCGAGGCC-CC        TTCGATGAGTTGCCG  47 8
CWR60_RS21120 NONE
CWR60_RS21115 4485626 .. 4485638 -  -5.5  -3.53811   CCTACGTGCCCGAAA                GCGAC CTG ATCGC                CTATGCGCAATTCAA  54 387
CWR60_RS21100 4483351 .. 4483365 - -11.4  -3.57144   GTGCGCACGCGCAAA               CAGGGC GAG GCCCTG               GCGCTGGCCACCGTG  71 267
CWR60_RS21090 4480947 .. 4480966 - -16.4  -3.75153   GCGCGCCAATGGAAA            CGCCGCGC ATGC GCGCGGCG             TCGGCAATCGGGCGG  88 81
CWR60_RS21085 4479155 .. 4479187 - -16.9  -4.54727   GTCGCCAAATGAAAA      CGGCCCCCGCCGCCA AGT CGGAAACGGGGGCCG      ATCGGCGCCGCGGCG 100 55
CWR60_RS21075 4477636 .. 4477656 - -14.7  -2.52676   GATCTTGCTAACGGA            CGCCCGCCA CCA TGGCGGACG            CCGAAAATTTGGGAT  71 40
CWR60_RS21070 4477254 .. 4477265 -  -7.2  -3.03124   TGCCAGTCGGCAACA                CGCG CTTG CGCG                 CCGCCGCCAGCGTCA  51 72
CWR60_RS21065 NONE
CWR60_RS21060 NONE
CWR60_RS21055 4474496 .. 4474534 - -12.2  -3.53012   GCTTTCCTGTTGAAA   CGGCTTGGCGGGTTCAGC CGG GCTGTCCCCGCCCTACCG   TAGGATGGGCGGCAC  74 67
CWR60_RS21050 NONE
        atpD NONE
CWR60_RS21040 4471643 .. 4471658 - -10.4  -4.17701   GCCAGAAACGACAAA              GGCGAC CGAA GTCGCC               TCTGTCTGCCTGACG  85 64
CWR60_RS21035 4470626 .. 4470639 -  -4.5  -3.59979   CCGCGGGACGGGAAA               GGCTC GTTC AAGCC                TCGTCGGCGGGGTCC  52 19
CWR60_RS21030 4469272 .. 4469289 -  -5.5  -3.33744   CTTTGGGGGAAAAAC             GCTGGCA AGGG TGCGAGC              TTTCAGGGCCGTGCC  51 217
CWR60_RS21025 4467044 .. 4467070 -  -5.7  -2.62184   TGTTCGGTCAGAGTA        CGGGTTCGAGCG CCGG CGC-CGGCCCCG         CTCAGATCTCCAGCG  44 27
CWR60_RS21020 4464905 .. 4464943 - -21.1  -2.52516   GGTCCCAGCACCAAG  GGCGTGAGTGCCTGTCCC CGCG GGGACAGGCAC-CTCGCC   AGCCCCCCCCGCGGC 100 42
CWR60_RS20965 4453493 .. 4453505 -  -9.1  -3.33696   GCTGCGCGTAAGCAA                GCGCA TGC TGCGC                CAGGCCGACCGCGCC  59 219
CWR60_RS20950 4451096 .. 4451110 -  -2.7  -4.21607   TCGAGGGAATATAAA               GTGGG ATGGG CCCGC               GCGGCGTCAGATGCG  63 32
CWR60_RS20945 4449829 .. 4449859 -  -2.5  -3.88703   CGGTAGAAAGAAAGA      GCCAGGGG-AAGCA GGCA TATTAGCCCCTGGC       GCCAGGCGGTAAGTT  54 90
CWR60_RS20940 4448524 .. 4448576 - -11.8  -2.70932   TGCCTGGTTCAAGTA TGGTGGACGCCGCGC-CCGCCACGC CTGC GCGCGGCGGCGGACGGCGCCCAGGT ATCGGTCAGCCCTGT  62 31
CWR60_RS20925 4445629 .. 4445644 -  -4.6  -3.53224   TAGGGCCTTGGGAAA              CTGGCG CGCC CGACAG               GAATCGAACCTGTAT  52 11
CWR60_RS20920 4444799 .. 4444816 -  -3.3  -3.53012   CTTTCTCCCCGGAAA             CGCCGCGG CGC CC-CGGCT             CGTGGTTACTTGACG  49 31
CWR60_RS20915 NONE
CWR60_RS20910 4441872 .. 4441908 - -10.9  -3.15544   TTCGACGCCGACGAA   GCGCGGCGCA-TCG-GC TTCGT GCGCGACTGCGCCGCCC   AGGCGCAGTGGCCCG  64 216
CWR60_RS20855 4431069 .. 4431105 -  -3.5  -3.66908   GCTGGGCAAAACCAA    GGTATTCGGCTCGTGGC AGC GCGCCGATCCGAAGAAC    GACAAGCTGACCGGC  51 329
CWR60_RS20840 NONE
CWR60_RS20835 NONE
CWR60_RS20830 4425595 .. 4425614 - -11.4  -2.58544   GCCGACCTGCAGAAT            GCCCTGGC GGTA GCCAAGGC             GCAGGGCTACGCGCT  59 71
CWR60_RS20810 4421666 .. 4421678 -  -6.2  -4.04319   TCAGAAATGGATAAA                CGGC TCGAT GCCG                CCACGAATCGAGACT  66 315
CWR60_RS20800 4420593 .. 4420623 -  -4.6  -3.55622   TCGAACGCGTGGAAA       CCCTCATCGAGG CCATGCT CCACGACGATGG       CGTGCGCCTGCCCGG  54 144
CWR60_RS20790 NONE
        metW 4417685 .. 4417703 -  -8.8  -2.63596   TGCTAGCGGATAGTA             GCAATCCG CGC CGGCTTGC             GGATGTCAGGACGCA  52 31
CWR60_RS20780 4416312 .. 4416327 -  -7.5  -3.14527   GAATTGTTATCAATA              CCGCC ACTGCG GGCGG               CTTGCGCGGGTAGCG  54 71
CWR60_RS20775 4414976 .. 4414989 -  -8.1  -3.50853   CCTGGTCAAGCAGAA               CCTGC TGCC GCAGG                CATTGCCGCCGGCGC  58 233
CWR60_RS20740 4408529 .. 4408545 - -13.7  -2.70932   GTCGCGCGCCAACCA              CGACGGC GCG GCCGTCG              AGTACGCGTGGCTGG  69 457
CWR60_RS20725 4406271 .. 4406327 -  -3.6  -3.75897   AATGCGGAATGGAAA GCCCCGG-GGCCGGCAAACCCCGTC GAGCCGCA AACCCTATTTGCCGGCCGCCACGGC GTGGCGGTCCAGCCA  57 5
CWR60_RS20710 4402333 .. 4402375 -   -10  -3.28712   GCGCCGTTTCTACAA CGGCGCG--GCCCAG-AAGGC GCGC GCCTTCCTGGACGGCACGCCG GAGCTGGCCGGACGC  63 350
CWR60_RS20700 4400757 .. 4400786 -  -4.1  -4.29738   CGATATCCACGAAAA       CTGCGTGCGCCAC GGCC ACGGCGCGGGCAA        CTACGTCAACTACGT  65 144
CWR60_RS20685 4397185 .. 4397217 -  -4.8  -4.07568   GTGGGCGGGCGAAAA     CG-GCGGCGACG-CGG ACG CCATCATCGCGGCGCG     CGGCCTCAAGCAGAT  63 311
CWR60_RS20665 4392757 .. 4392785 -  -4.5  -3.35679   TCGTTGCATGGATAA       TCAGCC-CGGGC CTGCCT GCCCGCAGCTGC        TTCGCGGGCCGCGCC  51 79
        mreC NONE
        mreD 4391302 .. 4391327 -  -3.9  -3.09492   TCTTGAATTCGAACA         TGCGTCCGCCCG GAT CAGACGG-CGGA         AGATTCGACGTCGTC  45 14
        mrdA NONE
        rodA 4387699 .. 4387746 -  -4.6  -3.61715   GATCGCGGTCAACAA GGCGCGCGTGCTGGCGGCCAG GGGCGAG CCGGCCCCCGACG-GCGCGCT GATCGACGCGCAGGG  54 496
CWR60_RS20615 4381631 .. 4381669 - -11.9  -4.38712   TCGAGGGCCAGAAAA  TCACCATGCAGGACC-TGC GCG GCAAGGTCGTGC-TGGTGA  AGTTCTGGGCCACCA  85 453
        rsmI NONE
CWR60_RS20585 4377674 .. 4377692 -  -6.6  -3.14344   GATCCTCGCCATGAA             TGGCGGCG CGG CAGCGCCA             CGGCCCGGGCCCGCC  50 397
CWR60_RS20570 NONE
CWR60_RS20565 4373932 .. 4373964 - -20.6  -2.81413   CAGCAAGTAACACCA      CGGTGCCAGTCCCC GCAAG GGGGACAGGCACCG      CAAATCTCCATGTGC 100 91
CWR60_RS20520 4366635 .. 4366652 - -14.1  -4.54727   GCGCGCAAATGAAAA             CGCCCCC TGAC GGGGGCG              CTTGCCCGCGCTGGC 100 46
CWR60_RS20515 NONE
CWR60_RS20510 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC 4359527 .. 4359564 -  -2.7  -2.71041   AAGGCGAACTATAAC   CGC-GCGCCGATGC TTAGGCCAGTC ACATGGGCGCGGCG   CGGTGCAGCCGGCCC  40 10
CWR60_RS20485 4358776 .. 4358806 -    -9  -2.84812   AGCGACAGCATGACA      CGCGCCATCAGGC AGGCGG GCCTGGTG-CGCG       TGCTGCCCGATTGGG  53 157
CWR60_RS20475 4357225 .. 4357266 - -10.1  -4.18488   ACGGATGGCAAGAAA GACA-TGCGCCTGGCGCAGC CAC GCTGCGCGCGAAGCACTGTC CACAGTGTCCGGCCG  85 167
CWR60_RS20470 4356049 .. 4356091 - -18.5  -4.76041   GACAGGCACCAAAAA TTCAGCGGGTGCCTGTCCCC CTTC GGGGACAGGCACCCGA-GTA TCAGAATCTGTGTCT 100 26
CWR60_RS20460 4353833 .. 4353852 -  -3.4  -4.07885   CATCTGCGCGCAAAA            CCGCGCCA GATA TGGGTCGG             AAGGCAGACGGAGCA  59 44
CWR60_RS20455 4349727 .. 4349740 -  -5.2  -3.77188   ATTGAAACATAAATA               GCGC AATCCG GCGC                CCTGGATCCGTCCCG  60 70
CWR60_RS20450 4348944 .. 4348964 -  -8.9  -3.96148   TGTCGTGAGGAGAAA            GGCCTACGC GAC GCGCAGGCG            GTCGTCGCCCGGCTC  70 8
CWR60_RS20420 4342196 .. 4342229 -  -7.4   -3.1505   ATCACCCCGCAGGAA     GC-CTACGACCTGGT GGTCT ACCAGGTCGGCGCGC     TGGCCGGCGTGGCTG  53 509
CWR60_RS20395 4338412 .. 4338433 -  -6.5  -4.28361   GGAATCCCAGGAAAA           CATCGGCCGC GAA GTGGCCGA-G           AAACTGGTGCGCTTC  72 368
        ubiE 4331661 .. 4331676 - -11.8  -3.53811   GGGAGCGGCTGGAAA              GGCCCC GGTT GGGGCC               AGCGCGGCAAACCTT  72 121
CWR60_RS20355 4330479 .. 4330506 - -19.2  -3.30007   AAGACCGGCCCATAA        GCGAACCGGCCC TGGC GGGCCGGTTCAC         GGTGCAGCCCGGCCG 100 103
CWR60_RS20350 NONE
        ubiB 4328038 .. 4328069 -    -5  -3.06991   TAGGATGGTGAAAAT      CGGTTCG-GGTCGGC CGC GTCGAACACGGACCG      GGCGAGTTCTAGTAG  45 117
CWR60_RS20340 4326957 .. 4327011 - -10.7  -3.72788   GGGCAGAAGACATAA GCTG-ATTTTACGGGAGCCTGTCCCC GGAT GGGGACTGGCTCGCGCAAACTTCCAC GGGAGCCTGCCCCGG  73 122
CWR60_RS20335 4326103 .. 4326134 -  -2.2  -4.68103   CCAACTGGAACAAAA     GGC-CCGCCACGAC TTCGAG GACGC-GCGGCGCC      AGGCCGTGCAATCGG  76 357
CWR60_RS20300 4315281 .. 4315297 -  -3.5  -3.04792   CCATCACTGGGAAGA              TCCGGGC CAG GCCCTGC              GCGAGGCCTGCCGCG  44 524
CWR60_RS20290 4313621 .. 4313651 -  -5.2  -2.52896   CCATCCCCGAACGCA       GCACGGCCATGCTG GTG CTGCACGGCCCCGA       CGGCATCCTGCTGCA  42 379
CWR60_RS20280 4308973 .. 4309019 -  -7.7  -3.57144   CGGTCCAGGCCGAAA CCCG-CGCCGCGCCGCGCGTGG AGCG CTTCGCGCGCCCCGGCGGCATG CCCGTCTAGCGCTTC  60 167
CWR60_RS20260 4305163 .. 4305180 -  -2.5     -2.97   AAATCAATCTACAGA             GTCGGAC GTTC GGCCGGC              GCGGACGCGCCGGCC  41 112
CWR60_RS20255 NONE
CWR60_RS20250 NONE
CWR60_RS20245 4302018 .. 4302052 -  -2.7  -3.53811   GGGATCCGCCGGAAA    GCCCGGCGCCAGCG CCGTTTCC CGCCGCC-CCGGCC     CGCCGCCTCAGTGCA  49 33
CWR60_RS20240 NONE
CWR60_RS20235 4300104 .. 4300117 -  -8.1  -3.14132   GCTGTCGTGCATGAA               TGCCG ACAG CGGCA                TCCCGCTGTCCGAGC  53 358
CWR60_RS20220 4297130 .. 4297157 -  -4.8  -2.71712   GTCGTCGCCGGAAAT        CGAGGCG-TTATG TGC CATATGCGCCGCG        CACGGGCCCGTGGGT  43 42
CWR60_RS20215 NONE
CWR60_RS20210 4295338 .. 4295353 -  -7.6  -2.57132   GCCTGCGCCGAGAAG              CTGTCA AATT TGACAG               GATCTGCCGCGGCCG  50 45
CWR60_RS20205 4294655 .. 4294705 -   -11  -2.50935   ACGCCACCCAGGAAC GCCCGCCCCGCGTGCTGCTGCT CGACGGC AGCGGCAACATGCGCGCCGAGC TGGTCATGACCGCCA  58 248
CWR60_RS20195 NONE
CWR60_RS20190 NONE
        zapD 4291437 .. 4291451 -  -5.6  -3.55071   CCAGACCGGCCCAAA               CTGGCA GTT TGCCGG               GCGCTGCTGAAATAG  54 137
        mdtA 4290118 .. 4290147 -  -7.2  -3.21099   CGGCCGCAGGATGAA       CAGGCGCGACG GGCTCACGG CGTC-CGCCTG       GGCGCCCCGGTATTG  52 10
        mdtB 4287021 .. 4287043 -  -4.8  -2.53164   GGACGGACGATGAAC           GGCGCC GACAGAATCAT GGCGCC           TGCCGCGCGGCCGCG  42 16
CWR60_RS20170 NONE
CWR60_RS20165 NONE
CWR60_RS20130 NONE
CWR60_RS20125 NONE
CWR60_RS20120 NONE
CWR60_RS20115 4272379 .. 4272418 -  -5.5  -3.62522   CAACTGCCCGAACAA  GGTGCGCAGCAGCGTGG TCTTGC CCATGCCGTTGCGGCCC   AGCAGTCACCACCTG  57 115
CWR60_RS20105 NONE
CWR60_RS20100 4267981 .. 4268009 - -13.7  -3.36273   GCGCGTGAACAGGAA        GGCCGTGCGCGCC GCC GGCGTGCCCAGCC        GCATGTCCGAGGCCA  77 483
CWR60_RS20090 NONE
CWR60_RS20085 NONE
CWR60_RS20080 NONE
CWR60_RS20075 4263592 .. 4263610 -  -3.1   -3.4247   AGAACGTCAACAACA            TGAGCGAG CGCG CCCGC-CA             GACGCACGCCAAGAT  47 336
CWR60_RS20050 NONE
CWR60_RS20045 NONE
        ruvX NONE
CWR60_RS20035 NONE
CWR60_RS20030 4255540 .. 4255550 -  -2.4  -2.72661   CAGCAGTTTCAAGCA                 GGGG TCT CCCA                 GACCGTACGCCCCGC  38 8
CWR60_RS20025 4254761 .. 4254797 - -16.4  -3.06831   CCAACGGCGACTGAA    CGCCGCCGCGGGCGGC CACGC GCCGCCCGGGCCGGCT    ACAGCTCGCCGGCGA  79 24
CWR60_RS19980 4245498 .. 4245509 -  -3.6  -2.73875   CTGTTGGCAATACGA                GCGA TAAA CCGC                 CTTTTTAACGCCAAA  41 64
        aroQ NONE
CWR60_RS19970 NONE
        accC NONE
CWR60_RS19960 4242177 .. 4242196 -  -6.3  -2.79183   GTCAGCGCCATGAGA            CGGCCTC CTGCCC GCGGCCG             CTCAGGCCTTTACGC  47 27
CWR60_RS19955 NONE
CWR60_RS19950 NONE
CWR60_RS19945 4239392 .. 4239410 - -13.1  -6.06723   CGCCGCAAAAAAAAA             CGCCCGC GTGAA GCGGGCG             TCTTGCCGGAAGCAG 100 48
CWR60_RS19940 4238815 .. 4238852 -  -4.8  -2.78384   CGGCGCCCCAGTACA  GGCC-CAGCGAC-AGCGC GACG GCGCTTGCCATCGCGGCC   AGGTGGGACAGCAGG  43 44
CWR60_RS19935 NONE
CWR60_RS19930 NONE
CWR60_RS19925 4236442 .. 4236457 -    -6  -2.56838   TAGATCGAAATACAT              GCCGCG CACT CCCGGC               GGATCAGATAGGACT  46 29
CWR60_RS19920 4234982 .. 4234994 - -10.5  -3.53091   ATTCGGCGTCTGAAA                CGGCG CTA CGCCG                CCGCCGGAATCGCCG  67 18
CWR60_RS19890 4224605 .. 4224630 -  -5.4  -3.95475   CACGCAAAACAAACA         CGACAGCGCCG CCTGC CGG-ACTGCCG         ACGCGACGACAGCAC  63 226
CWR60_RS19885 4223993 .. 4224048 -  -3.3  -3.40522   ACTTTCGGACGACAA CGACATGGCGGGTAGCGGCGGC-GACGT GGG AAGTCCGCCACCT-TACCCGA-ATGGCG CGCCGCTGGCGACAA  48 44
CWR60_RS19880 4222560 .. 4222571 -  -7.2   -3.6608   AGCACCTGACCGAAA                CGGC GCGC GCCG                 CCCTGGCCGATTTCG  60 250
CWR60_RS19870 4218534 .. 4218569 -    -6  -3.15544   CGGCATTTCCACGAA    CTGCTGGGCGGCG-TGA GCA CCAACGCCGTGCTGCAG    GACCTGATGCGCTCG  50 247
        dbpA 4214806 .. 4214820 -  -4.2  -3.28712   CCGCCGGGCTCAGAA               CTCTTC CAG GAAGCG               CATGCGGAACCGCCG  47 5
CWR60_RS19850 4213780 .. 4213809 -   -12  -3.16564   CGTGCAGCCCATCAA       CCGGCTGTGCGC CGCGGT GCGCGCCGCCGG        CGGCAGCGTGGTCTG  68 521
        pmbA 4207970 .. 4207995 - -19.1  -3.06815   ACGCCTGCCAAGACA         GTGCCTGTCCC CACG GGGACAGGCAC          CCTGCCGGCGCCGCT  90 50
CWR60_RS19810 4206530 .. 4206564 - -21.5  -3.53012   GGCGTTGCGCCCAAA    CAG-CAGGGGCCGCCC CGAA GGGCGGCCCCTGGCCG     GACCGAAACGGCGGC 100 45
CWR60_RS19805 NONE
CWR60_RS19800 4205422 .. 4205451 - -20.9  -3.28791   ACCGGGGCGCCATAA       GCAAAAAGGCCGC TTTC GCGGCCTTTTTGC        GGGACATTAGCGCTT 100 32
CWR60_RS19795 4203947 .. 4203958 -  -2.2  -3.14132   CTGGGCGCGCAGGAA                GCGCG CCT CG-GC                TTCCCGCTGCTGCAT  42 272
        erpA 4202910 .. 4202935 - -18.3  -4.54727   GCGCCCAAACGAAAA         GGCCCTCCGGC GCAT GCCGAAGGGCC          TCGATCGCGGACCGG 100 53
CWR60_RS19770 4198841 .. 4198851 -  -4.6  -3.28712   TGGGCCCCTCGATAA                 GAGG CTA CCCC                 ACCAACTTAACACGC  49 19
CWR60_RS19765 4198105 .. 4198126 -  -2.9  -4.62069   CGTCTACCGCAAAAA           TGCCTCAAG TCAG CATGAGCCA            GGCTCAAGCAAGCCC  71 52
CWR60_RS19760 4196636 .. 4196657 - -15.9  -5.53991   CATCGATGAAAAAAA           GACAGGCCC TGAC GGGCCTGTC            TTGCCGGCGGCGGGC 100 59
        nrdR 4195919 .. 4195951 -  -7.6   -3.5594   AACTGATCCGCGAAA     CGCGGCTGGACCTCG AACA CGTGGCCGAGC-GCG      CCGGATTCGGCTCGG  60 124
        ribD 4193089 .. 4193105 -  -7.9   -2.9006   AACCCATCGGATAGA              CGCGCAC CAC GCGCACG              GCGCTCCAATTGCGC  52 95
CWR60_RS19735 4190865 .. 4190892 -  -3.4  -3.14564   TGAGCCGCCGATCAA        TGAGCGAATTCA TGAT TCACCTCGCTCA         GGAAGACTTCCTCAC  44 23
CWR60_RS19730 NONE
CWR60_RS19725 NONE
CWR60_RS19700 NONE
CWR60_RS19695 4182034 .. 4182061 - -11.4  -4.50976   GTCCAGATGAGAAAA        GCCCGCA-AAACC TGA AGTTTATGCGGGC        TTTCCGGGGCGCTAC 100 63
CWR60_RS19690 4181490 .. 4181509 -    -7  -3.08679   CGGCTCGATGCAATA            GCGCCCGC CTTC GCTGACGC             GTTCTTCAGCTACGG  52 35
CWR60_RS19675 4180424 .. 4180434 -  -3.2  -3.41602   TGCATGGTATCACAA                 TACC CAG GGCA                 TTCATTCCGTCACCC  48 27
CWR60_RS19670 NONE
CWR60_RS19665 4178978 .. 4178988 -  -4.6  -3.21124   ATGAATGACGAAAAT                 CCCG ACC CGGA                 GCTCAGACAACCGGG  47 28
CWR60_RS19660 NONE
CWR60_RS19655 NONE
        ureC NONE
        ureE 4175650 .. 4175664 -  -2.8  -3.19255   CGAAGACAGATGCAA               CAGC GCGGCCA GCTG               TCCGGCGTCAAGACT  44 33
CWR60_RS19640 NONE
        ureG 4174204 .. 4174244 -  -8.7  -3.58726   GTCCTCTATATATAA  CGGCAGGCGCGCCGGCCCG CAC CGAGCAAGCGCGTGCGCGG  GAATCTTCGGCAAGC  62 99
CWR60_RS19630 NONE
CWR60_RS19625 NONE
CWR60_RS19620 NONE
CWR60_RS19615 NONE
CWR60_RS19610 NONE
CWR60_RS19605 4165799 .. 4165811 -  -3.3   -2.8372   TATCCCCGACGAAAG                GGCGT CGG ACGGC                TAGCCCTCATATTAT  41 42
CWR60_RS19600 4164922 .. 4164953 -   -13  -2.89668   CAAGAGCGGGATACA      GATGGACTGAGCGC GCCG GCGCTCAGTCGGTC       AGCTGGTCGGGGATG  69 16
CWR60_RS19590 4162573 .. 4162593 -  -2.5  -5.43866   TAAGGGTCAAAAAAA            TGACCACAG GGG CTGTGTTTA            ATTATGCTATTCCTG  90 81
CWR60_RS19585 4161620 .. 4161631 -  -7.2  -3.95456   AAACGGAACAGGAAA                GGGC CGCG GCCC                 CGGGAACTGGCTAGC  66 36
CWR60_RS19580 4160256 .. 4160298 - -14.1  -2.78384   CTGGTGGCCATGATA GGCGC-GGCCAAGGCCGACG GCCA CATCGGCCCCGACGAGCGCC AGTTACTCGAAACCG  67 302
CWR60_RS19570 4159163 .. 4159214 - -17.2  -4.27316   CCCGGGAATGGAAAA CTGATCCCTCCGGTGCCTGTCCCC GCAG GGGGACTGGCACCGGCCAAATCCG ACCTCCGGTGCCTGT 100 171
CWR60_RS19550 4155267 .. 4155280 -  -2.3  -3.02166   GCCGGAATGAAAGTA               CGGCA TTAT CACCG                GCCCGGATCGTCGGC  41 20
CWR60_RS19545 4154604 .. 4154618 -  -3.4  -4.13767   TTCTTCATGCGAAAA               CGTGGC AAG GCCGCA               CCGACCGGGCGATGC  59 172
CWR60_RS19540 NONE
CWR60_RS19535 4150413 .. 4150425 -  -4.7  -2.57344   GATCTGGCGCATAAG                CGGTG CTA CTCCG                AGGCGGGCGGCGCGA  42 18
CWR60_RS19530 4149610 .. 4149627 -  -3.3  -3.08464   CTACCACTGAGCTAA             CCACCCC GAAA GAGGCGA              AATTCTAGCACGAAA  44 73
CWR60_RS19525 4149498 .. 4149532 - -19.5  -3.54489   GGAAGCGGAAATGAA    GAAGGGCCGGT-GCTT TTGC AAGCGACCGGCCCTTC     TGGGATGCTGGTGGG 100 34
CWR60_RS19520 4148984 .. 4149010 - -11.5  -2.78384   CGTTGTTCGACGATA         GCCCAGGCCTG GCGCG CAGGCCCGGGG         ATGCGCACAGACAGC  62 101
CWR60_RS19515 4147534 .. 4147579 -  -7.4  -3.86822   GAAGCCTTCGAGAAA CTGGGCGCGCCGCC--CCTGCC CGAG GGCAGGTAGGCGGCTGGCGCCG GGCTAGAAGAAGCTC  66 28
CWR60_RS19495 NONE
CWR60_RS19490 NONE
CWR60_RS19480 NONE
CWR60_RS19475 4139496 .. 4139533 - -14.7  -3.15699   ACGCATCTATGAAGA   TGCCGTGGCCGACTTCG TACG CGACGCCGGCCGCGGCT    ATGCCGGCCGCCAGG  77 87
CWR60_RS19455 4135341 .. 4135353 -  -6.2  -3.60792   CCTCGAATGGTGAAA                CGCC GGACA GGCG                GGATCTGTGGAAAGT  56 89
CWR60_RS19450 NONE
CWR60_RS19445 4134363 .. 4134388 - -18.3  -5.54192   ATGAACCGAAAAAAA         GCCCCGC-GGCC TGC GGCCAGCGGGGC         GTGTACGGCGCCGGG 100 51
CWR60_RS19440 4132961 .. 4132986 -  -5.3  -4.25104   CCGGGCCCAGGAAAA         CCCCCAC-GCTG CGC CCGCTGTGCGGG         CGTGCCTGTCCCCGC  69 90
        fusA 4130524 .. 4130572 -  -8.2  -4.11216   GCGCCACCTGGAAAA GCGCATCGCGGCC-CGCGACGAC AAGCGG GTCGTCGCGCAGCCGC--CGCCC TAGCCCCGCGCCGCC  72 25
CWR60_RS19425 4129160 .. 4129204 -    -4  -2.87132   GGGTCGGCCGATACA TCGCAGGTA-TTGCCGCCGCG CGGC CGCGGCGTCATCCGCCGGCGG CCCCCGCGCCACGCC  43 12
CWR60_RS19415 NONE
CWR60_RS19410 4125821 .. 4125866 -  -8.9  -3.32769   GGCCGAAACCATCAA GGTCGGCATCGCCCTGGCCGTG CAT CCCGAC-AACGCCACGCCGACC ACCGCCAACTTCGTC  59 105
CWR60_RS19400 NONE
CWR60_RS19395 4122572 .. 4122594 - -10.4  -4.69622   AGACAAGGGGAAAAA           TCGCTGCGCC GGC GGCGCGGCGT           GCGGACGACGCTAGG  93 36
CWR60_RS19390 4121123 .. 4121138 -  -2.6  -4.08216   GTATTGCGTGGAAAA              CATG-AG CTA CTACATG              GTGCCGCGCTTCCTG  58 233
CWR60_RS19370 4116681 .. 4116693 - -10.5  -3.28924   TACGCGCTGGGAGAA                CCGGC CGA GCCGG                ACTTCTGGATGGGCA  63 247
CWR60_RS19360 4114675 .. 4114693 -  -4.5  -3.07994   TTCAACCTGATCGAA             GGCCATC CCAAC GATGGTC             GGACCCGGCAAACGG  47 420
CWR60_RS19295 NONE
CWR60_RS19290 NONE
CWR60_RS19285 4100224 .. 4100253 -  -4.9  -3.91084   CCAGCGGCAACGAAA       GCCAGCTCAACCGC CTG GCGGCC-AGCCTGC       AATCGCACATCGACG  60 251
CWR60_RS19275 4097451 .. 4097461 -  -2.4  -3.55563   ATGGCACGCCCGAAA                 CGCC GCA GGAG                 CTGGCTTCGCACCGC  50 403
CWR60_RS19265 4095963 .. 4095985 - -14.8  -2.72344   CTGGATGCGCAAGGA           CCTCGGCCTG GTG CTGGCCGAGG           CGCGCAACAATGGCG  70 196
CWR60_RS19250 4091937 .. 4091978 -  -2.9  -3.63515   GGCGATCCGCAAGAA GC-GCGAGGAAACCTTCGTC GAG GAAGAATGATCCCTCGATGC GGCCGGCGCCTGCCG  53 81
CWR60_RS19235 NONE
        zapA 4088739 .. 4088753 -  -2.8  -2.95102   ACGGCAGGGACAAAC               CATGAA TAC TGCATG               AATTCCGATACTGCG  42 61
        ssrS 4088515 .. 4088549 - -12.3  -3.05993   GGAGGGAGAGAGACA    TCCGAAGGCAGGCCTGC GAT ACAGGCCTGCCT--GGA    TAGATGCCCCGCCTG  67 27
CWR60_RS19220 4087529 .. 4087545 - -15.1  -3.16564   GTGGTATTCGAGCAA              GCCCCGC GCG GCGGGGC              AGGTAAGCGCCATGT  77 185
        ilvD NONE
CWR60_RS19205 NONE
        msrA 4083773 .. 4083804 - -10.8  -3.69256   AGGCACCGAAGAGAA      GGGGCAGATCCAGG AATA CCTGGACCTGTACC       GCGGCGAAGGCATCC  74 458
CWR60_RS19190 4082153 .. 4082167 -  -4.9  -3.62591   CGGAGAACCTGCAAA               CCGCA TGATT CGCGG               TTCCGGCTTCGTCGC  55 286
CWR60_RS19185 NONE
CWR60_RS19180 NONE
CWR60_RS19175 4079662 .. 4079700 -  -5.3  -4.07568   GCTGTCGGGCCAAAA   CCCAACGCTTAACACTG ACTCG CAGCACTAAGCGTTGCT   CTCTCGCCTTCCTGG  64 80
CWR60_RS19170 4076427 .. 4076437 -  -6.8  -3.65314   TTGAATCTGGAAGAA                 GCAC AGC GTGC                 GCCTGGCAGTCGGTT  61 127
         rrf 4076218 .. 4076252 - -19.5  -4.56597   GCGTCCCCCCAAAAA    CAAAACCCCGCGAGCC ATGA GGCT-GCGGGGTTTTG     AGCAATAAAAGCCTG 100 36
CWR60_RS19160 4075226 .. 4075246 -   -14  -4.54727   GCCTGCAAACGAAAA            CGGCTGGC ACAAA GCCAGCCG            TTGCGAGCGGAACCG 100 56
CWR60_RS19150 NONE
CWR60_RS19145 4071809 .. 4071863 -  -9.9  -3.56862   AGAAACCCGCCGAAA CCGCCAAGCC-CGCCGCGGCGCGCC CCAAGCC GGTGCG-CGCGGCACGGCTGAGCGC CTGGGATCTGCGCGA  67 285
        rnpB 4069715 .. 4069735 - -19.7  -2.52464   GGGCGCCGTAAGCCA            GCCGGCCGG ATT CCGGCCGGC            TGTCATGAAAATGCA  93 41
        mraZ NONE
        rsmH NONE
        ftsL 4067653 .. 4067674 -  -6.5  -4.16016   GGATTGTCGAAGAAA           GGCACCC-GC CTC ACTGGGCGCC           TCCGGCGGGCTGGTT  66 14
CWR60_RS19115 NONE
        murF NONE
CWR60_RS19105 NONE
CWR60_RS19100 NONE
        ftsW NONE
        murG NONE
CWR60_RS19085 NONE
CWR60_RS19080 4055799 .. 4055811 -  -3.3  -2.87132   GCGTCGTTCCACACA                GAGCG TCC CGTTC                AATCTTGTCGCGCCG  41 24
CWR60_RS19075 NONE
        ftsA 4053632 .. 4053643 -  -3.6  -3.55622   GTGAATCGCCTCAAA                GCCG AAGC CGAC                 CGTGGTCCGCAACGG  51 127
        ftsZ 4052176 .. 4052187 -    -3  -3.63968   TGCGAAAGCCGGAAA                TCTA CCAA TAGA                 CACCGGCATAACCGG  53 210
CWR60_RS19060 4051165 .. 4051193 - -14.6  -4.72986   CATCCCCACCAAAAA        GCCTATGGCCGC TCAGC GCGGCCATAGGG        CGAAAACCGATATCG 100 52
CWR60_RS19050 4049509 .. 4049534 -  -5.4   -3.5394   AAACCCGCCGGGAAA         CGATCCAGTT TAACGC ACCTGGACCG          CAACGGCCTGCCGTG  54 77
        secA NONE
CWR60_RS19040 4045786 .. 4045799 -  -5.9  -4.19704   TAAGGTCAGTGAAAA               CGGCC TGCC GGCCA                TCCATGGATCACGCA  70 161
CWR60_RS19035 4044398 .. 4044429 -  -8.6  -2.82635   ATCCCGATCACTACA      GCCG-GCACGTCGCC TAC GCCGACCCGCACGGC      AGCTTCACCATCGCC  53 368
CWR60_RS19025 4043275 .. 4043297 -  -4.8  -2.57132   GCCCTTTTCGATAAG           GGGCGC ATTATGCCGCA GCGCCC           GCGCCGCGCGTGCGC  42 42
CWR60_RS19020 NONE
CWR60_RS19015 4041373 .. 4041404 -  -4.3  -2.62396   TACCTTGCGAGATGA      CGGGCCTGGCATG CCCCGC CAGGCAAAACCCG       TTCACGGCGCACGCC  42 78
CWR60_RS19010 4040462 .. 4040480 -  -6.7  -4.37092   ATGGTTTCCAGAAAA            TCGGCCGC ATCG GCG-CCGA             TACCCGCCTGGGCAT  72 212
CWR60_RS18985 4035611 .. 4035629 -   -11  -3.55444   CCTTCACGCTGGAAA             CGCTCGAC CTG ATCGAGCG             CCGCATGGGCGAAAT  71 424
CWR60_RS18975 4032557 .. 4032575 - -11.7  -3.14051   CGACCTGCAGGAAGA             CACGCCG GTCAT CGGCGTG             GTCTACGACCCCAGC  64 515
CWR60_RS18965 4029902 .. 4029928 -  -6.4  -4.41348   GGGCCCTGAAATAAA         CTCGCCCCCTCA TTT TGAGGGTGCCGG         CATGCCGTAGGCGGC  73 221
CWR60_RS18960 4027526 .. 4027567 - -26.8  -3.54903   ATATAAAATGGATAA GACCCGATGCGT-GCCGGC AACGG GCCGGCGACGCATCGGGTC GGAAGGGAACGCGCC 100 62
CWR60_RS18955 NONE
CWR60_RS18950 4025727 .. 4025742 -  -3.3  -4.28548   ACGGAGTGATGAAAA              GAATC GTGCGG GATTC               AGCGATGCGACATGC  63 24
CWR60_RS18945 4024828 .. 4024853 - -14.7  -4.07568   CGGCCGGGTGCAAAA         GCCAAGCCGCC CGAG GGCGGATTGGC          GGGATGCGGGCCCGG  89 68
CWR60_RS18940 4024611 .. 4024660 - -32.6   -4.7373   GCACCGCATGAAAAA GGCCAGCAAGAAAAAAGCCGCT TCCATG AGCGGCTTTTTTCTTGCTGGCC TTGTTGCTGACCTTG 100 56
CWR60_RS18935 4023166 .. 4023212 -  -4.4  -3.57144   GGCGCGAGGTCGAAA GCCACATGGTCACCCCGGACAGC TGAC GCCGCCCGGGGT--CCGCGCG-C ACCGCCGCAACGGCG  52 62
CWR60_RS18905 NONE
CWR60_RS18900 4016898 .. 4016950 -  -8.3  -3.79787   GGACAGGAAGGGAAA CCGCGCCAGCCCTTCCAGCCCCGCG CCGCC CGCGATGCCGG-AGACCAGGC-CGG TCTCCGGTGTCAGCA  68 401
CWR60_RS18890 NONE
CWR60_RS18885 NONE
CWR60_RS18880 4013252 .. 4013262 -  -5.4  -3.25823   GCCTGTCTATATGAA                 CTTC ATG GAAG                 CCAGCTCGGAAAACG  51 6
CWR60_RS18875 NONE
CWR60_RS18870 4011133 .. 4011159 - -10.9  -4.52857   ACGTGTCATAGAAAA        CG-GCCAGGACA GCCT CGTCCTGGCGCG         CCAGCCGTCGCGGCC  95 46
        soxR NONE
CWR60_RS18855 4009455 .. 4009480 -  -5.4  -3.63744   GCGCGGGCGAAAAGA         CCGGC-GCACC ATCGG GATACAGCCGG         CAATACTGCCTTACG  57 57
CWR60_RS18850 4006799 .. 4006848 -  -5.6  -3.05384   CGCGCCGCCATCGAA GGCATGC-TGCTGGCCGGCGCGCA GACC TGCACGCTGAACGGCAAGC-CGCC CGGCTGCCTGATGGT  46 334
CWR60_RS18840 4005560 .. 4005576 -  -4.3  -3.14132   CCGCTGCTCTACCAA              CTGAGCT AAC AGCCCGG              CGATTGCTGCCTGTC  47 140
CWR60_RS18835 4005459 .. 4005488 -  -9.3   -5.0925   GCCGAAAAGCAAAAA       GGCCGTCAGTGAC TACT ATCACTAACGGCT        TTACAAATCATGGTG  95 36
CWR60_RS18830 4005186 .. 4005222 - -12.3  -4.56597   TTCCGGCTCTAAAAA    CCAAGGCCTTGCAACTC GAT GCGTTGCAAGGCCTTTT    AAAGTTCGTACTGCT 100 24
CWR60_RS18780 3994878 .. 3994901 -  -8.8   -2.9294   GAGACGATGCAGACA          CGCGTGCAAC GCCT GCTGCACCCG           GAAATCCACAGCCAG  53 424
CWR60_RS18765 3992072 .. 3992103 -  -2.8  -3.53012   CCTGGCCTCCGGAAA      CCGGAAG-CGCCCTG GTT CATGGCGGCGGCCAG      GCCAGCCGGCCGCCG  49 53
CWR60_RS18760 3991430 .. 3991473 -  -2.8  -3.91897   CGGGTCACGTACAAA TGGTAGGGAACGCGGCCGGC GTCA GCGCGCCGCTTCCGCGACCG CCTCGATGGTGATGC  58 3
CWR60_RS18745 3987217 .. 3987231 -  -2.7  -3.55622   GGGAAGCTGCTGAAA               GCCGC CTGAC GCCGC               CATCGCCCCGGCCTG  49 75
CWR60_RS18730 3983420 .. 3983443 -    -3  -4.17556   GAGATCCGCAAGAAA          GTCGAACAGG CGCG CGTGTCCGGC           TACGCCGTCACCATC  61 285
CWR60_RS18720 3980895 .. 3980927 -  -9.2  -3.26531   GCAGGAATACGAACA     CCGCCACGATCACCA CGAC CGG-AATCGTGGCGA      GCACGCGCCGCAGGA  61 132
CWR60_RS18710 NONE
CWR60_RS18705 NONE
CWR60_RS18700 3976032 .. 3976042 -  -2.4  -4.41348   GGGCTGGGAAATAAA                 CGGG TTA CACG                 GGGTCCACCGGGACG  65 19
CWR60_RS18695 3974404 .. 3974443 -  -5.7  -3.54408   TCCCAGCGAAATGAA CTGCTCGGTCG-CGCTGTC GGCC GACAGCGACG-CCGAACTC  CTGGAAGCCGCGGTC  57 197
CWR60_RS18685 3973059 .. 3973072 -  -5.9  -2.64735   ACGGTAGGGACAGGA               CCGGC AGGC ACCGG                CTCGACCATGCTAGC  46 97
CWR60_RS18680 3972331 .. 3972382 -   -10  -2.76492   GTACTCATCGCAAAC TCCCCGCGGCCGCGTCCGCCAGCC GGCATG GGC-GGCGGACGC-GCCGCCCTGT CTATTGCTTGACCGC  57 26
CWR60_RS18675 3971817 .. 3971844 -  -6.2  -2.79188   CATCGAAGGCAACTA        CGCCAACG-GCCG CCG CGGCACGCTCACG        CCCGATCCGCTGGCG  46 163
        lptD NONE
CWR60_RS18650 NONE
        rsmA 3964230 .. 3964268 - -10.3  -3.01712   CGCTGCGCGGCAAGA  CCCCGGCCGGCG-TGGC CCGCATC GCCAGCGCCG-CCGGCG  TGCCGGTGGTGGCGC  60 254
         pyk 3961311 .. 3961344 -  -5.2  -3.61398   GGGCGCCTGGAAGAA     GGTGCCGGTCTACGA GACCT TCATCG-CCGGCGCC     AAGGACGGCTTCAAC  54 454
CWR60_RS18625 3957910 .. 3957931 -  -7.3  -3.06796   GGCCAGCGCATCGAA           CGCG-AAGCC GAA GGCTTCCACG           CCCGGGTGGTGCAGC  52 279
CWR60_RS18585 3950148 .. 3950170 -  -9.1  -3.53563   AGACGCCCGTCGAAA          GCGCCCAGGC GCTG GCC-GAGCGC           GGCTTTCGCATCGTG  63 211
CWR60_RS18555 3944941 .. 3944971 -  -2.6  -3.73914   AGGATGGATGAACAA      TGGGCGC-GCGG CGGTCAGGC CCGCCGCGCC-A      TGCGGCCTGTTTTAT  51 37
CWR60_RS18550 3943239 .. 3943256 -  -4.1  -4.56597   GCCGCCTTCGAAAAA             CCCATAC ACCT ACATGGG              TGCCTGTCCCCGCAG  70 160
CWR60_RS18545 NONE
CWR60_RS18540 NONE
CWR60_RS18535 NONE
CWR60_RS18530 3939338 .. 3939390 - -15.4  -3.16921   ATCAAGCTGGAGTAA GCCGGCCCG-CACGGCGCCGGCTCG GCGC CGTGCCTACGCCTTCTCGGGCCAGC GCGCCATCACGGCGG  78 6
CWR60_RS18500 3933991 .. 3934022 -  -7.3  -2.52896   CGACCGGCGAATCCA     GCATGCGCAT-GCCG CGCT CGGCCAGGCGC-TGC      GCGATCAGGTCGGTT  47 393
CWR60_RS18480 NONE
CWR60_RS18475 NONE
CWR60_RS18470 3926861 .. 3926908 - -10.4  -3.01712   GGCCGCGCTGGAAGA CCAGGCCA-TCGAGCCGCTGCGC TGA GGGCAGCGGCTCCCCTGGTCAGG GCTGCAGATTGCCTT  60 21
CWR60_RS18445 3922242 .. 3922271 - -23.7  -3.18264   TGCCCGACTGAGCAA       GGGTGCCTGTCCC CGCG GGGACAGGCACCC        TGTCATACGCCATGA 100 97
CWR60_RS18430 3918609 .. 3918638 - -23.7  -2.62616   CGATGGCGTACAGCA       GGGTGCCTGTCCC GGCT GGGACAGGCACCC        TTGCCGCGGGTGTCG 100 72
        fumC 3915131 .. 3915143 -  -4.7  -2.52464   GGCGCGCCCAACTGA                CGCGC CCG GCGCC                GCTCTAGCGGCGCGC  42 29
CWR60_RS18405 3912987 .. 3913002 - -11.8   -5.4505   GCGCGCAAGAAAAAA              GCGCCC CGCG GGGCGC               TTTCGGCGTGCACGG 100 54
         ggt 3909801 .. 3909820 -  -5.6  -3.72576   TCGCGCCGTATGAAA            CCCTGC-CC ACC GGCGCCGGG            CCGATCTTCCTGGCG  58 414
CWR60_RS18375 3905197 .. 3905238 - -10.1  -2.78463   AGCGCGTGGACCACA CCATGACGGCCGCCGACCTG ACC CAGGTGGGCAGC-GACATCG AATCGCTGGTGCTGT  56 113
CWR60_RS18340 3898948 .. 3898983 -   -19  -3.85817   ACCTCCTTCGATAAA    GCGGGGTGCCTGTCCC AGCG GGGACAGGCACCTCGT     CATACGCCAGCACGC 100 76
CWR60_RS18325 NONE
CWR60_RS18320 3894593 .. 3894639 -  -9.3  -2.74701   AGAGGTGCAATACCA CTGACT-CCGGTGCCTGTCCCC GCAG GGGGACTGGCACCGGCAAACTC CTTGCCTGTCCCCGC  55 154
CWR60_RS18300 3886519 .. 3886538 - -12.8  -5.60993   CCGCGCATAAAAAAA            CCGCCGGC AAGG GCCAGCGG             TTTTTTTTACCTGCA 100 52
CWR60_RS18290 3884295 .. 3884310 -  -2.6  -2.55668   GATCGCGATAGCAAT              CATG-GT GCG ACGCATG              GTTAGCTCCTGACAG  38 142
CWR60_RS18285 3882658 .. 3882714 -   -12  -2.80398   GAATGAATGCAAGCA TGGCAACTCGATACGGGGTGCGGCGCC GCCA GGCGCCGCA-CCCGGGGCGGGACGCCG GCGCGCAGCGTCCCT  62 49
CWR60_RS18280 3881663 .. 3881694 -  -5.7   -2.7185   ACCAGCGTTTAAGTA      CGGCGCGCATCAG TGGCCT CCGTTGCGCGACA       GCCCGGAACGCAGGC  45 3
CWR60_RS18275 NONE
CWR60_RS18270 NONE
CWR60_RS18265 3878367 .. 3878382 - -10.4  -2.61239   GATATATTCGACAAC              TCGCGC GTCG GCGCGA               TCAGCCGCTACGGCG  55 430
CWR60_RS18245 3874943 .. 3874983 -  -5.3  -3.67558   GATATACCGGAACAA GCCCTGATTGTAGGCCGG AACCCG CCGGCCCACCG-CAGGCC  GGCCGCAACCGCCTC  57 39
        ettA NONE
CWR60_RS18235 3872516 .. 3872530 -    -7  -3.10715   CGCACCAGCAGCGAA               GCGAGC GCA GCACGC               ACAAAGCGCGTCCCA  52 164
CWR60_RS18230 3872208 .. 3872223 - -11.8  -5.64274   GCAGCCACAAAAAAA              CCCGGC CGAA GCCGGG               TTTCTCGTTCAGGCG 100 52
CWR60_RS18205 NONE
CWR60_RS18200 3865350 .. 3865393 - -11.9  -3.28712   CCGCCTGCTGGACAA CCT-GATCGGCAACGC-CC-TG CAT CATGGCGCGCCGCCGATCGAGG TCAGCCTGCGGCGCG  66 299
CWR60_RS18185 NONE
        recQ 3859594 .. 3859633 - -17.3  -2.63631   TCAACGCCGACATCA CCGC-CGA-CGGCGCG-CAC GAA GTGGCGCGCCGCTCGCGCGG CACACCGCGTATCGC  77 420
CWR60_RS18170 3857772 .. 3857790 -  -6.6  -3.40403   TTCCGCCGATGACAA             GGATACGC ATC GCGCAGCC             CCCTGTAGCATCATT  55 92
CWR60_RS18165 3856637 .. 3856667 -  -6.6  -3.39784   GCATCGGCAAGAAGA       CCGCGGAGCGCCTG CTG CTGGAGATGCGCGG       CAAGCTGGGCGCGGA  55 228
CWR60_RS18130 3850812 .. 3850865 -  -6.5  -3.18264   CTGGTGACCGAGGAA GGCTGCGAACTCA-TCACCCGCGGCG TGC CGGTGCAGGCGCGCGAGATCGAAGCC CTGATGCGCGAATAG  51 50
CWR60_RS18115 3847383 .. 3847424 -    -8  -4.74539   AAGAATGGAAGAAAA GCGCCTAGACCGCCGGCGTGC GCG GC-CGC-GCCGGTAT-GGCGC CGGCCGCGCGGCGCG  85 75
CWR60_RS18110 3846051 .. 3846089 - -18.8  -2.79831   GTCATCCGAAAACAG   CCAGCAGGTGGCGAGGCG CGA CGCCTCGCCGCCTGATTG   TAGTTGACGACGCGC  87 58
CWR60_RS18105 3845114 .. 3845146 -   -10  -3.53012   GCCCTGGGCCGCAAA     TACCACGGCCTGATT CCGG AATAAGGCCG-GGTA      TCGAGGCCGCGCTCA  67 38
CWR60_RS18095 3842658 .. 3842677 - -11.4  -3.21354   GCATACAGCCAGCAA            TCGCGCGG CTGG CCGCGCAA             CGCTGCCGGCATCCA  66 53
CWR60_RS18070 NONE
CWR60_RS18065 3838611 .. 3838625 - -12.8  -4.27316   CGCCCCAAGGCAAAA               GCCCCC CTG GGGGGC               AGCAAGCTGGCGCAA  91 69
CWR60_RS18060 3836846 .. 3836864 -   -11  -3.13403   GCTGGGCGAGGAAGA             CGTCGAGA ACT TCCCGACG             CTGCTGGTGCAGGCG  64 190
CWR60_RS18050 3835737 .. 3835761 -  -6.4  -5.00616   GGTTTCCGGAAAAAA         TG-AGGCCCCC CCGG GGGGGCGTGCA          GGGCAATGCGCTAGA  86 36
CWR60_RS18045 3834763 .. 3834791 - -12.3  -2.91264   GTGGTTACGGATAGA        TGCCGCCCCGGGG CGG CGCCGATGCGGCA        CCGCAACAAGGAGCA  66 139
CWR60_RS18040 3833728 .. 3833740 -  -9.1  -3.71917   ACCGGAAACCGGAAA                CGACC CCA GGTCG                CCTGTTAGTCAGGCT  68 183
CWR60_RS18035 3829213 .. 3829271 - -22.6   -2.5474   GAAAAGCAATAAAGG CCGCGTCCCAAT--G-CGGCCGGGCCGCGC ATC GCGCGGCCCGGCCGGCCGATCGGG-CGAGG CCTGCGCGCCCGCCG 100 57
CWR60_RS18025 3827177 .. 3827197 -    -9  -5.40072   CCTTGGGCAAAAAAA           GAGGCCACC CGAA GGTGGCC-C            GAATTCCAGCTCTGC 100 95
CWR60_RS17995 3822337 .. 3822359 - -16.2  -3.34715   GACGTGCTGGAAACA           GGCTGGCCCG AAC CGGGCCGGCC           GCCCCTCATGGTGTC  82 158
CWR60_RS17890 3803422 .. 3803432 -  -4.6  -3.55444   GCCGGATTCGCGAAA                 CACG AAT CGCG                 GGTTATCCAGCAGCT  52 28
CWR60_RS17885 3802080 .. 3802100 - -10.4  -2.54812   ATGGACATTACGAAG           CGCC-GCCG GAGC CGGCCGGCG            TATGGTCAGTTGATC  57 31
CWR60_RS17880 3801134 .. 3801144 -  -3.2  -3.89346   TTTCCATGGGATAAA                 CTCC CGC GGAA                 CCTTTGCATGGATCG  56 133
CWR60_RS17875 3800199 .. 3800210 -  -7.2  -3.04248   TAACACTCCCGAATA                CGCG CCAT CGCG                 CTCAGTTGCCGAACG  51 27
CWR60_RS17870 3799727 .. 3799743 -    -8  -3.18264   TGCCCGAGCGACGAA              TCAGGC GGCTG GCCTGA              GCATCATCAAGCCTG  54 9
CWR60_RS17865 3798246 .. 3798264 - -10.2  -3.72893   CACCGGGTCAGGAAA             CGGCGCGC CGC GCACGCCA             TGCGCGCTTCATGTG  70 177
CWR60_RS17860 NONE
        folD 3796091 .. 3796147 -  -7.8  -2.62184   CGGCCGGCCAGACCA GGCTGCCGTCGGAC-CGG-CGCTATGCG AAC CGCGCGGCGTCCGAGCGCGACGGCATGC ACATCGATGAGAAAA  48 75
CWR60_RS17835 NONE
CWR60_RS17830 NONE
CWR60_RS17825 3788284 .. 3788294 -  -6.8  -3.07816   GTGCGAGTTATCCAA                 GGAG ACG CTCC                 CGTTCGATATCGACG  51 7
CWR60_RS17820 NONE
        purU NONE
CWR60_RS17810 NONE
CWR60_RS17805 NONE
CWR60_RS17800 3783491 .. 3783512 - -14.5   -5.1287   TCCAGATTCAAAAAA           GGCCCAAAC TTCG GTTTGGGCC            TTTTTGTTTTTGCAT 100 53
CWR60_RS17790 3782093 .. 3782115 -  -9.8  -3.40403   GGCGCGCCAGGACAA           CGGCCTGTAC GAC ATGCAGGCCG           TACTGGGCCTGTAAG  65 76
CWR60_RS17775 3780157 .. 3780178 - -15.9  -6.23209   TGAACCAAAAAAAAA           CCTCCAGGC TTGC GCCTGGAGG            CAGGGTTGGTAGAGC 100 48
CWR60_RS17770 3778780 .. 3778822 -  -3.9  -3.61356   ACCACGCACGCGAAA TGCTGG-GCGGCCATACCGC GCCG GCGGCCTGAGCGCGCCTGCT ACCAAACCGCAAAAA  51 47
        hrcA 3775062 .. 3775100 -    -3  -3.54382   GCGAAGAAACACGAA  GACACCTCTCAGGGCGC CGCCCC GCGCGCAG-GCGGTATC   CGGCCCGAAATGGGA  49 41
CWR60_RS17750 3773928 .. 3773945 -  -8.3  -2.52676   CATTCGCGGAATGGA             CCGGCGC GCTC GCGCCCG              CCGCTTCAACCACAG  51 50
CWR60_RS17745 3773592 .. 3773617 -  -3.8  -5.52384   TTTCCAGGAAAAAAA         GCCCGGCTCC CATGAC GCCGCCGGAC          GGCGCGTCGCCGCCC  90 54
        grpE 3772928 .. 3772972 -  -5.6  -3.05384   CTCGGCGGGATCGAA TGG-G-GCGGCGGCCATGCCTG CTT CAGCCCTGGCCGGCGGACACCA CGACCAGCGCGGGAC  47 3
CWR60_RS17735 3772540 .. 3772555 -  -4.6  -3.14564   TCAGTCCCCCAGTAA              CTGGGG TTGG CCACAG               GGTTTTTCAAGTCCC  47 32
        dnaK 3770487 .. 3770529 - -18.5  -3.27298   GTTCTGAATCATCAA CGCG-CGCGCCCGGTAGCTG GAAT CAGCTACCGGGCGTATCGCA CGTCATCGTTCGGCC  93 42
        dnaJ 3769276 .. 3769305 - -19.3  -3.04144   GCGCCACTGCCAAGA       CGGCGTCTGTCCC CGCC GGGACAGGCGCCG        CATGCGTCAGCTGAA 100 32
CWR60_RS17715 NONE
CWR60_RS17710 3764879 .. 3764910 -  -7.9  -3.85864   CGAGCACTACAACAA      GGAGGCCGGCGCGG TCTGG CTGCGCCGGC-TGC      TCGACGCCTGGCCCA  67 187
CWR60_RS17695 NONE
CWR60_RS17690 3762052 .. 3762080 - -16.7  -4.38712   CCGAGCGCTAGAAAA        GGAAAAGCCCCCG GAT CGGGGGCTTGCCC        GGCGCCGCCGGCACC 100 43
CWR60_RS17680 3760104 .. 3760128 - -11.4  -5.02074   CCATTCGGCAAAAAA         CCCGCTACCCC CATA GGGGC-GCGGG          TTTCTCGGCTGATGC 100 60
CWR60_RS17675 3758934 .. 3758951 -  -2.7  -3.29211   CAACCCGAAACGGAA             TCCCA CATCCACC TGGGA              CCGTTGAGCGCGGCG  46 57
CWR60_RS17670 3757575 .. 3757598 - -10.9  -3.02144   CTACGCGGGCGAATA          GCCGCCCGC TAGGCT GCGCGCGGC           GCGCGCGGCGCGGTC  62 10
CWR60_RS17635 NONE
CWR60_RS17630 3746078 .. 3746088 -  -2.4  -4.08216   CCAGTGCCCTGAAAA                 GCTC GGA GGGC                 TTCACCCGCCTGCTC  58 294
CWR60_RS17610 NONE
        lolA 3741279 .. 3741299 -  -3.3  -3.05596   CACGGGCGGATCCAA           CG-CGCAT TACACC ATGCGGCG            GCCTTGGCCCGCAGG  42 74
CWR60_RS17600 NONE
CWR60_RS17595 3738458 .. 3738475 - -11.3  -4.98531   CGCCGAAATGAAAAA             CGGAACC CGCG GGTTCCG              TTTCTGGTTCACGTG 100 54
CWR60_RS17590 3737515 .. 3737529 -  -3.4  -3.46602   TTGCTCACACCACAA               GCGTCG GCG CGGCAC               GTGCAGAACGACCCG  48 473
CWR60_RS17570 3735025 .. 3735038 -  -9.5  -3.28791   ACGGCTGGCGCATAA               CGGCC CGCG GGCCG                GTCAGCCTTCCTGGC  61 27
CWR60_RS17560 3733376 .. 3733397 -  -7.3  -2.78463   AGGCGCTGCAGCAGA           TCACGC-CCA GCA TGGCGCGCGA           GATGGTGTTCTTCCC  49 352
CWR60_RS17505 3720274 .. 3720322 -  -6.6  -2.70932   CGCCGCCGGCAATGA TGGCACGGATCCGTGACCGGGC GCGGTCA GCCCGGGC-CGGA-CCGCTCCT CGTTGTCCGCGGCGG  47 3
CWR60_RS17500 3719432 .. 3719448 -  -4.4  -2.70143   ATTTGAACGAGACTA             GCGGGCT GTCC AGCC-GC              CGTCGACGGAAATGG  43 6
        yaaA 3718591 .. 3718628 -  -3.4  -4.21812   GCCGAGCGAAAAGAA  CAGGAAGACGCGTAAGCC TGCC GACAT-CGCG-CGTCCTG   TCAGGCCTGCTTGCG  63 26
CWR60_RS17490 3716924 .. 3716938 -    -7  -3.72576   CGGCGGGCGAGGAAA               CGCCCG AGA CCGGCG               AGCGCGCCGACGCCG  64 463
CWR60_RS17480 3712962 .. 3712977 -  -3.2  -2.87132   TGGCCTCCTTACAGA              TCCTCG GAAC CGAGCA               GCATCTCGGTCAGCC  41 3
        ilvN 3712427 .. 3712454 -  -8.2  -2.55074   GTGAATGCTAATGCA        GGGTGGCGCGCC GCCA GGCGCGCCGGTC         AGATTTTCAGTATCC  52 24
        ilvC 3711297 .. 3711314 - -14.1  -5.79595   GCGGAAAAGAAAAAA             CGCGCCC CGTG GGGCGCG              TCTGGACCAGCCTGC 100 75
        pssA 3710230 .. 3710243 -  -8.1  -3.27022   GCCAGCCGAGATCAA               GCAGG TCGG CCTGC                CCAGCGTGCGCCAGG  56 199
CWR60_RS17455 3709640 .. 3709663 -  -4.5  -3.63367   GGTTTCAAGAAAAAC          GAGC-CCCGA GACAA CCGGGCGCCC          TGTTACGCTGTTGCC  55 28
CWR60_RS17450 3709244 .. 3709279 - -16.8  -5.04601   CTTACAAATGAAAAA    CCGTGGCCGTTGCGAC ATGC GTCGCCCCGACCACGG     TTGCGTCATGGGGAG 100 54
         pnp 3707016 .. 3707033 - -14.1  -4.66163   ATGCGGACGCAAAAA             CGGCGCC CGCG GGCGCCG              TTCTTGCGTCAGGAA 100 50
CWR60_RS17440 NONE
CWR60_RS17435 3704628 .. 3704651 -  -3.7  -3.73775   CGCAGCCTTACGAAA          CGGGGCTGC GCTACA GCGACCCCA           AGGATTTCCATGTGA  55 336
CWR60_RS17420 3702701 .. 3702733 -   -14  -4.66318   ACCAGGGCAAGAAAA      TCCGGGCGCACCGG GCGAT CCGGCGCGCCCGCC      GTCCGGCTGGCGCTA 100 38
CWR60_RS17415 3701840 .. 3701852 -  -5.5  -3.02074   CAAAGACATTACAGA                CTCCG GAA CGGAA                ACTTAAGCTGCGGCG  47 28
        secG 3701320 .. 3701369 - -17.8  -4.11216   TGCCCATGGGCAAAA CCGCCAGGGCGGCTGGCCGCGCCA TGCG CGGCGCG-CC-GCCGGCCCGGCGT TATTGCGCGGGCTTG 100 25
CWR60_RS17405 3701072 .. 3701097 - -13.3  -4.91109   CCTGGACGACAAAAA         GCCCATAGGCG CTGA CGCATATGGGC          TTTTTTGCTGGCTTT 100 86
CWR60_RS17400 3698144 .. 3698169 -  -2.4  -3.58343   CGGAGCATCGGGAAA         CCGAACTGGC GCAACT GCTGGTCCGG          GAGGCCGGGGCCCTG  50 123
CWR60_RS17390 3695906 .. 3695944 - -12.4  -3.87994   AGTGATGCCGACAAA  CCGCCCGCGCCGT-GCG GACGGA CGCTACGCCGCGGACAG   GCGCGTCCGATAGGA  81 11
CWR60_RS17385 NONE
CWR60_RS17380 NONE
CWR60_RS17375 3691831 .. 3691866 -    -9  -3.90291   ACCTCCTGAAGTAAA   CAG-CCGG-GCGACGG TAGCGG CCGCCGCGCCGGTCCG    GATTCAAGCGCCGCC  73 29
CWR60_RS17370 3690780 .. 3690823 - -10.8  -3.75665   GCAGACGCCATGAAA TCTTGCAGGCGCCAGTCCCC CTGC GGGGACAGACACCTGCGCGC CGGCTCAGTCGACCT  73 30
        metC NONE
CWR60_RS17350 3686352 .. 3686410 - -18.7  -4.56597   TTCTTCGTTGAAAAA GGCCACGCGCCGCGGGCGCGGGCCGAACG CAA CCACCGGCGC-CGCCCGCGGCGC-CGGAC CTGCTCGAATCGGAA 100 66
CWR60_RS17345 NONE
CWR60_RS17340 3683244 .. 3683256 -  -3.3  -3.63627   CGTTCAGATGCGAAA                CGCCA CGG TGGGG                TCGGACCGGACCTTG  53 1
CWR60_RS17315 3675866 .. 3675904 -  -6.6  -4.00042   CGCGCCATCAAACAA  TGCGGC-CGGCCCGCGC CATGCC GCGCGATCCATGCTGCA   ACCAGGGGACCAGAG  64 57
         azu 3675155 .. 3675185 -  -9.6  -2.62184   TGTTTCGCGAGATCA       TCGGCCCGCAGG CGCAGGT CGAGCGGGCCGA       GCACATCCTGGCCGG  55 133
CWR60_RS17280 NONE
CWR60_RS17275 3664966 .. 3665003 -  -7.5  -3.24411   ATGCGGTCAAAGATA   GCGCAG-GCGCGGCGTGC CCC GCAAGACGCGCTCAGGGC   AGCCGGCAAGGCGCG  56 19
CWR60_RS17270 3663980 .. 3664002 -  -3.3  -3.38046   TGGGTATCCGAAATA           TGCAGCACG CGCAT CATGCCGCC           TCCAGCCGCTGGCCG  48 16
CWR60_RS17265 3663158 .. 3663172 -  -9.2  -3.14795   AAAGGTTCACGAACA               GCGGCA TCG CGCCGC               GGCGAGCGTCATCCG  59 34
CWR60_RS17260 3662164 .. 3662174 -  -2.4  -2.66326   TGAACGGGAAATCGA                 CCGG ACC CTGG                 AGCGGTTCAGCGACG  38 212
CWR60_RS17240 3659199 .. 3659234 - -27.8  -4.24326   AAACATGATTCAAAA    GCGTGAAAAGCCGCCC CGAA GGGCGGCTTTTCACGC     GCAGGCACAAAGGCC 100 87
CWR60_RS17235 NONE
CWR60_RS17230 3658212 .. 3658228 -    -5  -3.05384   GGCGGCGCGATCGAA              CCGCGC CGCCC GCGCCG              GTGGTTCAGCGCGCA  45 31
CWR60_RS17225 NONE
CWR60_RS17220 NONE
        nuoE NONE
        nuoF NONE
CWR60_RS17205 NONE
        nuoH NONE
        nuoI NONE
CWR60_RS17190 NONE
        nuoK NONE
CWR60_RS17180 NONE
CWR60_RS17175 NONE
        nuoN NONE
CWR60_RS17165 3644066 .. 3644082 - -13.7   -6.3578   AGGCGAAAAAAAAAA              CCGCCTC GTG GAGGCGG              TATCGCGGAAGCGGC 100 50
CWR60_RS17160 3641525 .. 3641546 - -15.1  -4.98531   GCCGGAAATGAAAAA           CGGCCCCCC TTGC GGGAGGCCG            TCGGAGCGGCGGGGT 100 52
CWR60_RS17150 3637464 .. 3637495 -  -5.7  -3.66178   CGCCGGAACTGGAAA      CCGGCCTCGCCGCG CATCT CGCCGCT-GACCGG      ATCCAGCAGGTAGTA  57 308
CWR60_RS17125 3632417 .. 3632437 -  -5.3  -3.44146   TGGTTCGAGAAGTAA            GCCACGCAC AGG GTGCCTGTC            CCCGCCGGGATCCGG  53 105
CWR60_RS17110 NONE
CWR60_RS17105 3626650 .. 3626687 -   -12  -2.64616   GCGCTATGTAGACGA  CCG-CAGCCGCTCGCGCG TGGC CG-GCATGCGGCTGACGG   TGTCGTTCGGCGTCA  61 205
CWR60_RS17095 3624441 .. 3624469 - -13.1  -3.14564   GCAGCTGCGCATGAA        TGCCTACGCCACC CAT GGCGGCGTGGACA        AGAAGCGCTTCGAGC  68 275
CWR60_RS17070 NONE
CWR60_RS17065 3618992 .. 3619018 -  -6.4  -3.15249   CAGATCGGCCAGGAA         GGCCACGGCAAG GCC CTCGACTCGGCC         CACTGAGGACCGCTT  51 50
         smc 3613887 .. 3613908 -  -2.9  -3.28447   TCACTCATGAGAATA           TCCCGC-GCC TAA GGCAGCGCAA           ATCCGAATATGGGTT  46 41
CWR60_RS17050 NONE
        ligA 3610674 .. 3610693 - -13.6  -4.71426   TCGCCATCAACAAAA            TTGCCCGC TTTC GCGGGCAA             TTTTTTTTCGGCTGC 100 63
CWR60_RS17020 NONE
CWR60_RS17015 NONE
CWR60_RS17010 3606527 .. 3606543 -  -4.3  -3.05471   AGTATCAAATAACCA              CCCCGAC CCC ACCGGGA              TCAACCCTAATCCGG  45 131
CWR60_RS17005 3605154 .. 3605177 - -19.6  -2.62735   ACACGGCGCATACGA          CGCACCGGCC CTCA GGCCGGTGCG           AGGTGAAGCAGGAGA  93 101
CWR60_RS17000 NONE
CWR60_RS16995 NONE
CWR60_RS16990 3601075 .. 3601094 -  -7.8  -3.29461   CAAGGGCTTCGACAA            CGCCATCA TGCT CGACGGCG             CGGGCCATGTCGCGG  55 392
        pncB 3589271 .. 3589288 - -14.1  -4.17048   GGTTGGCGAAAACAA             GCCGGCC TTCA GGCCGGC              GGAAGCTGGAACACC  91 16
CWR60_RS16920 3588713 .. 3588747 - -14.3  -2.73875   CGCCCGGCAAGATGA    GGGCG-TCGCGGCACC GGTC GATTCCGCGAGCGCCC     GTCCCCGGATGGAGG  69 155
        argE NONE
        trpB NONE
CWR60_RS16890 NONE
CWR60_RS16885 3580681 .. 3580712 - -14.4  -4.67353   GCATGCATGGAAAAA      TGACAACGCCCGGC CTGG GCCGGGCGTTCGCA       GGCACTGCCGGCGGG 100 46
CWR60_RS16880 3579932 .. 3579951 - -12.8  -5.60993   GGGTTCAGAAAAAAA            CCCGCCAG TGCG CCGGCGGG             TTTGCAATGATTTGC 100 61
CWR60_RS16875 3578596 .. 3578622 - -23.8  -3.92869   TCACTGACGCACAAA         GCGGGTTGCGGC AGC GCCGCAACCCGC         TTTTTCCTGCTGTGC 100 66
CWR60_RS16865 3573979 .. 3573991 -  -4.1  -3.42809   AATACCACCAACGAA                TAACC CAT GGTCA                GGCCGTCTCCAGTTG  49 23
CWR60_RS16860 3573208 .. 3573265 - -15.6  -3.27408   TCTTACCCAAATAGA CGGTGGCGTGCGCCGCGCTATTCCGTCGC CGG GCGACGG--CAGCGCG-CGCATGGCGCCG ATCCAGGTAAGACAG  80 75
        msrP NONE
        msrQ 3571076 .. 3571094 -  -4.4  -3.65827   CAATGGCGAGGGAAA             CTGGACGC GCG GCGGCCAT             GGCGATACCGACAGC  51 460
CWR60_RS16830 3568659 .. 3568686 -  -7.6  -3.88291   GATGACTCCTAGAAA        CGGGCCGCATTG TACG CGATCCGACCCG         AGTTGATCTCAATCC  66 34
CWR60_RS16825 NONE
        plsX 3567350 .. 3567366 -  -4.4  -3.14211   AGCTTTTTCCATCAA             GCGG-TG TCCC CAGCCGC              GCCGGGCGCGACGGC  47 5
CWR60_RS16815 3566313 .. 3566360 - -11.9  -2.50816   TCGGTATGGAGGAAT GGCGG-CGTGCGCGGT-CGCGCA CAGG CGCGCGCAGCGCGCCCTTCCGCC TACATGCGGGCCAGC  61 25
        fabD NONE
        fabG 3564548 .. 3564581 - -12.3  -4.03234   GCGTTTCCACAGAAA     CGCGCGGCTGGGC TTGGATGG GCCGCGCCGCGCG      CTTCTCACTATTGCA  83 33
CWR60_RS16800 3564100 .. 3564120 -  -4.5  -3.55563   ACGGCATTCCTGAAA            CCGCCCCGA TTC CCGGCGCCG            CCCCGAAGTGTTCGA  52 72
        fabF NONE
CWR60_RS16790 NONE
        rpoE NONE
CWR60_RS16780 3561129 .. 3561142 -  -2.3  -3.54408   GCGCATGTAAAGCAA               CGGTG TCAT CAACG                TCCTGCTCCGGCGTC  48 20
CWR60_RS16775 NONE
CWR60_RS16770 3558493 .. 3558517 - -22.9  -4.65895   CGGGCGAGCCAAAAA          CGAGGGGGCGC CAT GCGCCCCCTCG          TTGCGGCAACCAGCC 100 62
CWR60_RS16765 NONE
        lepB 3555732 .. 3555745 -  -3.7  -3.17392   TAGCGGTCAATGGAA               GCGGC CAAT GCGGC                TCAAATCGCTGAAGT  45 3
CWR60_RS16755 NONE
CWR60_RS16750 NONE
        recO NONE
CWR60_RS16740 3552291 .. 3552321 -  -9.5  -3.01712   CGGCGTGTGGGAACA       GCCGACGGCGCAG TATTC CATCGCCGGCGGC       ACCGTGACCCTGCAA  59 253
        lptF 3544750 .. 3544775 -  -6.1  -3.01791   ACGTGCTGCCCAACA         GCCAGGTGGTGC TGC GCAGCACC-AGC         GTCATCGCCCAGTAC  48 280
CWR60_RS16690 NONE
        mmsA 3541070 .. 3541093 -  -8.2  -3.15544   CTGCAGGTTCATGAA          TTGGCCCCTGT TAG AC-GGAGCCAA          TTATAAGTAATATAG  56 98
CWR60_RS16680 3540079 .. 3540095 - -15.1  -5.08088   AACGGGCAAGAAAAA              GCGCGCC GCA GGCGCGC              TTTCACCGGGACATG 100 52
CWR60_RS16675 3539496 .. 3539513 - -14.1  -4.41895   AAGGCCCAAGCAAAA             GCGCCCC GAAC GGGGCGC              TTTTGCTTGGGCCTC 100 107
CWR60_RS16665 NONE
CWR60_RS16660 NONE
CWR60_RS16655 3534919 .. 3534939 -  -5.3  -2.88069   GTCAGACCATAAGGA            TAGCAGCCG GCA CGGGGGCTA            GGCAGCACGGCGCGC  46 23
         acs 3532640 .. 3532670 - -14.7  -4.17089   TGCAAAGCCGGAAAA      GGCACGGGCCGGTC ATGC GACCGGCCCG-GCT       GGCTACAGGCTGACG  95 101
CWR60_RS16645 NONE
CWR60_RS16640 3530653 .. 3530678 -   -14  -3.28712   GCGGGCGGCTGAGAA         CGC-GCCGCGC TCAGC GCGCGGCCGCG         CAATGCCCGCGTACC  75 10
CWR60_RS16615 NONE
CWR60_RS16610 NONE
CWR60_RS16605 3524439 .. 3524456 - -14.1  -5.41143   CATGGGCGAAAAAAA             CGCCGGC TAAC GCCGGCG              CCTTACATACAAAAA 100 51
CWR60_RS16600 NONE
CWR60_RS16595 NONE
CWR60_RS16590 3520417 .. 3520440 -  -2.3  -4.71828   AGTTGAGGAAGAAAA          TGCGGCAGGC GCCAA GCC-ACCGCG          TTCAATACGCGCCGC  74 27
        gsiB NONE
        gsiC NONE
        gsiD 3516869 .. 3516926 - -13.4  -3.48276   CGGCCCTGGAGATAA CAGGGC-CGCCGCGCGGGC-GGC-CCG ACCGGCG CGGCGCCTGCATGCGCCGCGCGCCCTG CCCTACTTGCGGTCT  75 28
CWR60_RS16570 3515769 .. 3515781 - -10.5  -3.36492   GGGGGAATGTCAGAA                GGCCG TCT CGGCC                AGCCACTGACGCCAC  65 7
CWR60_RS16565 NONE
CWR60_RS16560 3512946 .. 3512959 -  -3.8  -2.80307   GAAATTTGGATTATA               TCCG GGGAAG CGGA                CGTGTTGGGGTTTCC  41 176
CWR60_RS16555 NONE
CWR60_RS16550 NONE
CWR60_RS16545 NONE
CWR60_RS16540 3508752 .. 3508798 - -14.3  -2.89055   CAAACGCGGTAGACA GCGGT-TTCCGGCCGGGCCGCG ATGC CGCGGCCTGGCCGGATTACTGA CCATTAACGCAGGTT  71 29
        ftsB 3508300 .. 3508315 - -10.4  -5.86332   CCAAGGCAAAAAAAA              CTCCCC TGGC GGGGAG               TGTTGGCGCGTCCGG 100 74
CWR60_RS16525 3505747 .. 3505767 -  -4.5  -3.04792   TGATCAGGCGCAAGA            GCGGCGTCA TTG CGGCGCCGG            GGAGCGACTGAGCCA  45 11
CWR60_RS16520 NONE
CWR60_RS16515 3504514 .. 3504541 -  -6.2  -3.39784   CCAGGCCGAACAACA        CGCGCAGCGCCTG GCC CAGG-GCTGGCCG        GGCGGAGCCGGGCCG  55 288
CWR60_RS16435 NONE
        sdhC NONE
        sdhD NONE
CWR60_RS16420 NONE
CWR60_RS16415 3483357 .. 3483367 -  -6.8  -3.01906   CCAATAAACACTAGA                 CCGT ACG ACGG                 ACCATCAGTTCCTTG  51 10
CWR60_RS16410 NONE
CWR60_RS16405 3481693 .. 3481706 -  -9.5   -5.4505   GCCGGCAAGAAAAAA               CCGCC CGAA GGCGG                TTCTTTCAGTGGACG 100 54
CWR60_RS16400 NONE
CWR60_RS16375 3473394 .. 3473412 -  -5.2  -4.42081   AACATAAAGGGAAAA             CCCGCAAT TTT ACTGCGGC             CCGCTTCCCTGCCTG  72 16
CWR60_RS16365 NONE
        odhB 3466769 .. 3466810 - -13.5  -3.74693   CCGGATTCGACGAAA CCGGCAGGGCCGCC-GGGCG GGC CGCGATGGCGGCCCAGCCCG TGGCGGCAGCGACAG  79 73
        lpdA NONE
        zapE 3463907 .. 3463923 -  -3.5  -3.14132   GGCCTGCCGGAGGAA              GTCGCCG CCA CGGTGGC              CTTCCTGGCTTCCGA  45 114
CWR60_RS16340 3462061 .. 3462086 -  -6.9   -3.6968   GCAGAAGCTGAACAA         GACCGTGCA GGAGGTGG TGCACAGTC          CGCAGGTCAGCAAGC  61 190
CWR60_RS16320 3458531 .. 3458564 - -14.5  -3.14344   CAGGGCGCCCAGGAA     TACGCGCCGGCGCCG GCCG CAGCGCCGACGCCCA      GGCCCGCCAGCAGAC  76 286
CWR60_RS16310 NONE
CWR60_RS16305 NONE
CWR60_RS16300 NONE
CWR60_RS16295 NONE
CWR60_RS16290 3451486 .. 3451514 - -19.6  -2.53876   GCTGATCGCAACGCA       GGCGCCGC-CCCG TCAT CGGGTGCGGCGCC        TGCGTCGTTGCCCCG  93 67
CWR60_RS16280 3446823 .. 3446841 - -11.6  -3.91911   CGCAGTCCAAGGAAA             GCCCGGCC CCA GGCCGGGT             TTTCCTTTTGCGCGG  81 44
CWR60_RS16270 NONE
        pgeF NONE
        phaC 3442419 .. 3442438 -  -4.8  -3.61894   AACGCCCGCCAAGAA            TGCCGGCC TTGC GGCCCGCG             CGCGTACTCAAACCG  52 33
        phbB 3441594 .. 3441622 -  -9.6  -3.04263   ATTTTACGTGTAATA       CCGGGCGTCCG CTTCCCCC CGGAC-CCCGG        CCCCCTCCGAATGCG  57 44
        phaR 3440918 .. 3440937 - -16.4  -4.24204   GACTCATACGGAAAA            GGGGCGCC CGTG GGCGCCCC             TTTTCCTTCAGCCAG 100 51
CWR60_RS16245 NONE
CWR60_RS16240 NONE
CWR60_RS16235 NONE
CWR60_RS16230 3437566 .. 3437580 -  -8.5  -2.70932   TGGCGGGCGGAACCA               GGCGC GGACA GCGCC               CGGCAGAGGTGGCGG  52 74
CWR60_RS16225 3436534 .. 3436545 -  -2.2  -3.38046   TCCTGATGGCAAATA                CCTG CCGT CAAG                 AATACGAAAACTTGC  46 150
CWR60_RS16220 3435072 .. 3435113 -  -7.9  -3.89354   GGTCGAAACGAACAA TGGCGTGGTGACGCTGACCG GTA CGGTCGGCACCGCCAC-CGA GGCGGATCAAGCAGC  67 200
CWR60_RS16190 NONE
CWR60_RS16185 3425736 .. 3425777 - -18.7  -3.55323   AAAAACCTGACACAA CCTTCCGGTGCCTGTCCCC GCAT GGGGACTGGCACCGGCAAA  CTTCCCAGGTGCCTG  95 105
CWR60_RS16175 3423699 .. 3423720 -  -2.1  -2.87132   GGCCGCCCGCAGACA           TGCCCGCGC CGTT ACGCCTGCA            ACAAGGCCCGCAGTT  40 15
CWR60_RS16170 3422401 .. 3422429 -  -6.5   -2.7728   CGGAAATTGCAACCA        TTTCCGCGCCACC CTT GGCGGCGCGCCGA        ACCCGGCCGGCGCTA  47 38
CWR60_RS16165 3421408 .. 3421418 -  -2.4  -3.14564   CGACCGGCCCACCAA                 GCCG TCA CGCC                 TGCTGCCCGACCAGC  43 480
CWR60_RS16155 3418924 .. 3418943 -  -7.8  -3.62046   CCAGCCGGCCAACAA            CCGCGC GATCATGG GCGCGG             CCCCGCCTTCGCGCA  60 334
CWR60_RS16100 NONE
CWR60_RS16095 NONE
CWR60_RS16090 3404808 .. 3404831 - -10.2   -3.1855   CGCGCCAATATGGAA          TGC-GGCCGGC ATA GCCGGCCCGCC          GCGCGTCACGCCGCC  62 31
CWR60_RS16085 NONE
CWR60_RS16080 3401714 .. 3401735 - -18.7  -3.17075   GCCGCCTGAACGCAA           CGGCCCGCC TGAC GGCGGGCCG            CTTTTCGGACCGGAT  90 47
CWR60_RS16060 3396861 .. 3396871 -  -2.4  -3.57144   TTGTTCATCTGGAAA                 CTGC CTT GCTG                 TCGTGACCGTGCCGG  48 49
CWR60_RS16055 3395480 .. 3395502 -  -3.2  -3.03124   CGTCATGCCGGAACA           GGCCCTGGAC ATG GTGCTGGGCT           ACGCCTGCTTCAACG  43 480
CWR60_RS16035 3391448 .. 3391500 - -12.7  -3.60818   GCAAAACGCTGGAAA GCCTCGCGCGTCGGCGTGCAGGCGC TGCAG GAG-CTGAACGCCGTC-CGCGAGAC CCACGGCGCGCACGA  74 186
        gyrA NONE
        serC NONE
        pheA 3372143 .. 3372185 -  -4.1  -3.86816   TGCAGAAAAACAATA TGGCAGC-GCCG-GACGGA CACACGC TCCGTCACGCCGGCCGCCT GGTGTGCGTCAACCA  57 51
CWR60_RS15930 NONE
        aroA 3369881 .. 3369894 -  -3.1  -3.36515   GCGGATGCGGAAATA               GCCATG GGG CA-GGC               GCCGTTCAGTCCCGC  48 31
CWR60_RS15920 3369202 .. 3369212 -  -6.8  -3.91716   GTACTGCCCAAACAA                 CACG CGC CGTG                 GCTAGGCGCGCCAGA  66 27
CWR60_RS15915 NONE
CWR60_RS15910 3366881 .. 3366910 - -16.6  -5.00616   GCCGGCCCGAAAAAA       CAAAGCCCCTTG AACAAG CAAGGGGCTTTG        CCGGTACAACGCCAA 100 67
CWR60_RS15905 3366428 .. 3366442 -  -5.6  -4.72272   TCTCGGTAGGAAAAA               GGGACA CGG CGCCCC               GGGTTACAGCGGCGA  81 29
        lapB NONE
CWR60_RS15895 NONE
        rfaD 3362808 .. 3362820 -  -6.2   -3.2794   TTCGAGCGACAGGAA                GCGG CCTCC CCGC                TGGCGCTCTTCGATG  53 461
        cysM 3361264 .. 3361313 -   -17  -3.01712   CTTCCTGGTCGAACA TGGCTGGCAGCGCGGCCTGC-CG GTGTT CGCGCCGGTCGCGCTGCCGGCCG ATCCGGCGCCGCTGG  82 357
CWR60_RS15870 3359466 .. 3359481 -  -7.5  -3.08006   AAATAACAATAATTA              CCCGG CGAAAC CCGGG               ACCGCATTGCACAAT  54 53
CWR60_RS15865 NONE
CWR60_RS15860 3357713 .. 3357732 - -16.4  -6.06723   TGGCCGAAAAAAAAA            CCGCGGGC GACA GCCCGCGG             CTTTCTCTCTGCGTG 100 52
CWR60_RS15855 NONE
CWR60_RS15850 3354915 .. 3354930 - -11.8  -5.96521   ATGAACCAAAAAAAA              CGCCCC TTGC GGGGCG               TTCTCGCCGAAGCGG 100 46
CWR60_RS15840 3353088 .. 3353117 - -12.8  -2.87344   CAGCGCCGGCAGATA       GCGC-CGGCGGGC AAACA GCCCGGCGCGCGC       TTCAGTCATCGCGCA  66 27
CWR60_RS15830 3351538 .. 3351549 -  -7.2  -3.72576   TGCTGCTGCAGGAAA                CGCG CGAG CGCG                 GCTACGCGGTGTGCG  64 429
CWR60_RS15820 3349724 .. 3349744 - -10.4  -3.29144   CCACTGCTCGGACAA           GCCCGC-CG CCAC CGTGCGGGC            AACGATGTCGACGGC  63 205
CWR60_RS15800 3346634 .. 3346652 - -13.8  -4.89063   CGAGTGAAAAAGAAA             GCGCGCGC AGC GCACGCGC             CCCTTGCGGGCGCGT 100 58
CWR60_RS15795 NONE
CWR60_RS15790 NONE
CWR60_RS15785 NONE
CWR60_RS15780 3342204 .. 3342255 -  -2.2  -4.59773   GGTGACGCTGAAAAA GCTGGACGGCTACGC-GCCGGTCCT GGTCG AGG-CCGCCCGCG-AGCTGTCGCGC CGTATTGGCGGCTAA  70 48
CWR60_RS15760 NONE
CWR60_RS15755 NONE
CWR60_RS15750 NONE
CWR60_RS15745 NONE
CWR60_RS15740 NONE
CWR60_RS15735 3332405 .. 3332432 -  -5.4  -3.01712   GTTCCTGCGCGAATA        CGGCTCGCTGCAG AAC CCGCTGCC-GCCG        CGCTACTACGTGCCG  46 453
CWR60_RS15715 3328819 .. 3328833 -  -2.7  -3.14881   GAATCGGGTCACGAA               GCTCC GGTCG GGCGC               GCGCCGCGCCTGTCG  44 84
CWR60_RS15710 NONE
CWR60_RS15705 3325014 .. 3325050 -   -13  -2.53995   ATCCAGCTCAACTGA   CTG-GGGTGCCTGTCCC CGCG GGGACAGGCACCTGCTG    GATGCTTGCCTCACC  67 36
CWR60_RS15695 3320665 .. 3320678 -  -2.3  -3.01918   CCAGGGCATAAACGA               CTTCC ATCA GGCAG                GACTCCCGGTTTGCG  41 18
CWR60_RS15690 NONE
CWR60_RS15685 NONE
CWR60_RS15680 NONE
CWR60_RS15675 NONE
CWR60_RS15670 3317507 .. 3317532 -  -8.2  -2.70932   TCGCTCCTTGAAGTA         GGCGGC-GGCC GTCAT GGCCTGCCGCT         GACCTTTCTACCATA  52 115
CWR60_RS15665 3316887 .. 3316902 -  -4.6  -2.84454   ATAAAGGACTTAAAG              GGTCGG ACAG CCGACA               TTTTGCCTGAATGCG  44 90
CWR60_RS15660 NONE
        tadA NONE
CWR60_RS15650 3314405 .. 3314430 -    -6  -4.15044   CCCTGCTGGAAGAAA         CCGCCGCCCG CATCGC CGAGCAGCGC          GCCAGCGCCGACGGC  69 119
CWR60_RS15625 3307860 .. 3307897 - -18.4  -3.28924   TACCTGTCGTTATAA   GCACGCCGCGGGCGGCC GGCCA GGCCGCGCGCGG-GCGC   CCCGCTTACGCCTCG  93 31
CWR60_RS15620 3306917 .. 3306940 - -17.4  -2.61695   GGGATCGGCAAATAG          GCCGCGGGCC GGCG GGCCCGCGAC           ACGGTATCGGTATGA  80 57
CWR60_RS15615 NONE
CWR60_RS15610 3305092 .. 3305114 - -11.9  -3.15544   GGTCATGGCGATCAA           GGCGCGGGC GCCAG GCCCGCGCG           TGGTTCAGACGTATT  66 30
CWR60_RS15605 3304216 .. 3304238 -  -6.2  -2.78463   AGCGTGTGCATCATA           CGGCGCCA TTGTACG TGGCGGCG           CGCCGGATACCCCCT  47 39
CWR60_RS15600 3303602 .. 3303647 -    -9  -3.09492   CGGCGAAGGCGAACA GGCCTGAGGCCGCGGCGGGCCTG GCT CAGGCCTGC-ACGTCC-CAG-CC GCCGCGCCCGCGGGT  59 5
        tsaD 3299343 .. 3299394 -  -4.2  -3.95324   CATCGGGAAGAAGAA GTAACCCACTCAGGAGCCTGCCCC CGCG GGGACAGGCCCCCCGTCAGCCTAC CCGGCCTGGATATCC  59 22
CWR60_RS15570 NONE
CWR60_RS15565 NONE
CWR60_RS15560 NONE
CWR60_RS15555 NONE
CWR60_RS15550 3294606 .. 3294633 - -21.3  -3.75153   GCGCGCCAACGCAAA        CGCCCCGGGGC GTTGCA GCCCCGGGGCG         TCATTCCTGCGGATC 100 49
CWR60_RS15545 3293563 .. 3293616 - -14.8  -3.55444   GGGCCATGCCGGAAA CGGCTGTCCGAGCGGACGCCCCGTCC CCCACC GGACGGGACGTCC-C-CGG-CAG-CG CCTCAGAAGGTCCGC  81 28
        rlmD 3291614 .. 3291641 - -14.2  -3.24017   AAGCGTAGAATGGAA        GCGACGCCTTCCA TGC CGGAAGGCG-CGC        AACCGGCCCGCCGTC  75 484
CWR60_RS15530 3291226 .. 3291280 -  -8.2  -3.52877   ATGAAGAGATGATAA TCGTTGGCTATCAATTAATCAAATTT AAT AAATCCAATCAATTGATAGCCATAAA CAATCGACTGCTCAA  62 47
CWR60_RS15525 3290405 .. 3290428 -   -21   -3.6215   CGAAGGGAGGGGAAA          GCCGGCGGCG GCAG CGCCGCCGGC           CAGGCATCAGGCCAG 100 32
CWR60_RS15520 3288721 .. 3288741 -  -8.1  -3.65902   CTGACCGTACGCAAA            CCCGCCGCC GAC GGCTTCGGG            CTGCACGGCAGCGGC  60 170
CWR60_RS15505 3284922 .. 3284968 - -20.3  -4.87626   GCCGAACAGGAAAAA GCCCGGCTGGTGCCG-TTCCTC ATGG AAGGAATCGCCACCAACCGGGC CATGTTCCAGGCCGA 100 116
CWR60_RS15495 3283332 .. 3283356 -  -7.7  -2.78384   TTGCCGCGCAGTACA          TCGCCACCCGC AAG GTGGCCGGCGA          CGATCCCTATACCTC  49 408
CWR60_RS15485 3281715 .. 3281764 -  -6.3  -3.64703   GTTTCGTCAGGGAAA TCCCCTAGGCGCTTGCG-GCGCC CGAAGC GGCGAACGCAGGC-CCTTGGGGC TAGCCGGCGCCGATG  59 25
CWR60_RS15475 3279601 .. 3279618 -  -4.1  -3.76125   CCACCGGAATGGAAA             TGCCGAT CAGG ACCAGCA              GCAGGATCAGGGCGG  57 47
CWR60_RS15460 3276177 .. 3276199 -   -22  -2.53876   CTCGATGGTAAGGGA           CGGGCCGGCG CAC CGCCGGCCCG           CCGGATGGTTACCCG 100 34
CWR60_RS15455 3275251 .. 3275263 -  -2.7  -3.51232   CGTTGGCGAAATGAA                CAACA TCA TATTG                GAATGGACCGATGCC  49 118
CWR60_RS15450 3274172 .. 3274196 -  -9.9  -5.24129   GCGCTGGAGAAAAAA          GCGCAAGGCCA GGC TGGCCCCTCGC          CCGAAATCGACGGCC 100 176
CWR60_RS15435 3258623 .. 3258642 - -13.6   -4.6971   GAAATTTCAACAAAA            GCCCATCC GAAA GGATGGGC             TGCAATAGGGTGGAA 100 125
CWR60_RS15430 3257731 .. 3257741 -  -3.2  -4.45261   GAAAGAAATGGAAAA                 CAAG AAT CTCG                 TGACAAGCCGACCAT  69 85
CWR60_RS15425 NONE
CWR60_RS15420 3254104 .. 3254135 -    -3   -3.9941   CCCCGCAGAAGGAAA     TTACGCGCGCGGGC ACGGCG GCCCG-GCG-GTCA      GCGAATATCTGGCCC  58 23
CWR60_RS15415 NONE
CWR60_RS15410 3251240 .. 3251259 -  -5.6  -3.01712   CTGGCTGCCGCAACA            CATGACGC TGTA GCGTCGCG             GCCGTGTTCTCGCCG  47 44
CWR60_RS15365 3242936 .. 3242964 - -14.6   -3.6106   CGTAACAGGGGGAAA       GGC-CGCGCCCCGC CCG GCGGG-CGCGCGCC       GATGCATGATGGATT  81 40
CWR60_RS15360 3239182 .. 3239239 - -16.2  -2.71712   CGCCTTGTTCGAAAT GCGCGATGGCGGGCTGACCCTGCAGGT GCATG ACCGGCGCGACCAGCCCGCCTT-GCGC GTGACGGTGTGCCCG  77 63
        glnH NONE
        glnP NONE
        glnQ 3235676 .. 3235697 -  -8.8  -3.05844   CGGCCGACGCCAATA           TCGTGCAT GTCACG ATGCACGA            CGACGCGGTTTCCAC  55 165
CWR60_RS15310 3229864 .. 3229875 -  -4.4  -3.35679   GGCCGCCAGCGAGAA                CTGA AACC TCAG                 CCGCGTCCCACGAAC  51 22
CWR60_RS15300 3227107 .. 3227117 -  -3.2  -3.89614   GCCAAGGGCGACAAA                 GCCA ATC TGAC                 CAAAGCCGAGCGTAA  58 441
CWR60_RS15275 3224351 .. 3224377 - -12.2  -3.05384   GCCGGCCTCACCGAA         TTCGACGCCGCC CCG GGCGACGCCGAG         GTGGCGGCGCTGCGC  66 458
CWR60_RS15265 3222083 .. 3222099 -  -6.5   -4.8083   CAACAGCACGAAAAA              TGCCAGC GTG GCCGACA              GCGCGGCCGCAAGTT  82 139
        rdgB NONE
CWR60_RS15245 3216619 .. 3216641 -  -5.4  -4.16842   CCGACTGGCAATAAA           CAGGCAAGCA AAA TGCGCGCCAG           GTCCCGCACTCCTGG  69 133
        glnA 3215097 .. 3215149 - -22.1  -3.11634   CGTCATAGGAGGCAA CCGGGACG--GCGCGGCGGGCGGGCC GCGA GGCCCGC-CGCCGCACAGCCTCCCGG ATTACAGGCTGTAGT 100 27
CWR60_RS15235 NONE
        ntrC NONE
CWR60_RS15220 3210691 .. 3210713 - -11.9  -4.56597   CGCGCCGTGGAAAAA           TGGGCGCCG GCTGG CGGCGCCCG           TCTCACTTTACGGCA 100 33
CWR60_RS15215 3209688 .. 3209715 - -10.4  -3.01791   AGCCCTGGTGGAACA        GCGCCTGCAGGC GTTC GACCGCGGGCGC         TAGCAGGGACGCGGC  60 48
CWR60_RS15195 3204960 .. 3204973 -  -9.5  -5.27335   GCGGCCAAAGAAAAA               CCGCC CGAA GGCGG                CTTTTCCTGGCGGCG 100 48
CWR60_RS15185 NONE
        dkgB NONE
CWR60_RS15175 3198802 .. 3198833 -  -4.3  -3.55761   TAGGCATTTGCGAAA      GTGGCCCGCCC TCAACCATTT GGACGAGCCTC       GCGTGCCATTGCGCC  52 104
CWR60_RS15170 NONE
        recG NONE
CWR60_RS15160 3195179 .. 3195205 -  -9.4  -3.14132   CGCGTGGTCGAGCAA        GCCCTGGCCGA GCATTT CCGGCC-GGGC         TTCGCCACGCCGGCC  59 58
        mmsA 3192650 .. 3192679 - -18.6  -2.67316   GAACGCAACAAGGCA       GC-CCGGCGCGGC GCCCG GCCGCGCCGGCGC       GCACTCAGCCCGAAC  87 30
CWR60_RS15145 3192043 .. 3192062 - -13.6   -5.7946   CCGGCAAGAAAAAAA            CCGGCATC TCTC GATGCCGG             CTTTTCTTCTGCGCG 100 48
CWR60_RS15125 NONE
CWR60_RS15120 NONE
CWR60_RS15115 NONE
CWR60_RS15110 NONE
CWR60_RS15105 NONE
CWR60_RS15100 NONE
        tviB NONE
        tviC 3176650 .. 3176673 -   -11  -3.28712   GCCCGGCGGCCAGAA          GCGCCGGT AGCGGGTG ACCGGCGC           GCCCAGCAGCTCCGT  66 82
CWR60_RS15080 NONE
CWR60_RS15075 NONE
CWR60_RS15070 3171166 .. 3171193 -  -6.9  -3.66178   GTCGGCAACTCCAAA        TCGACCGCGCC TAGCCG GGCGGGGCCAA         CCCCATGTGCCGCAG  61 8
CWR60_RS15050 3159377 .. 3159401 - -11.3  -3.29144   GGAGGTGTTCGAGAA          GCCGGCCTCGA CCT TCGTGGCGGGC          TTCATCGGCTCGCCG  66 503
CWR60_RS15025 3154371 .. 3154391 -  -5.3  -2.53263   GCGACGCCGAACTCA            TCGGCCGAA CTC CTCGGCCAG            CTCGCGCGACCGGCG  44 2
CWR60_RS15020 3153702 .. 3153712 -  -3.2  -3.53811   GGGACCCCGTCGAAA                 TGCG TGA CACA                 TGACGCCGTGAATTG  49 103
CWR60_RS15015 3152321 .. 3152357 -   -13  -2.71791   ACTCGTGCTCCAAAT    GGCTCCGGCTCCGG TAGTGCGAC CCGGAGCCGGAAAC    CTGGGCGTACGTTGA  67 72
        livH NONE
        livM NONE
CWR60_RS15000 NONE
CWR60_RS14995 3148628 .. 3148670 -  -8.4  -3.75665   GCAGACGCCATGAAA TCCTGCAGGCGCCAGTCCCC CATGC GGGGACAGGCACCT-C-GGC CTACCCGCCCAGATA  65 26
CWR60_RS14980 NONE
CWR60_RS14975 3144760 .. 3144798 -  -4.4  -3.53012   TCGGCCGCGGCGAAA   GCATGCTGACCACGATGT TCT ACATCGTGGCAGGCCAAC   TGGTGTGCAGCGCCG  52 340
CWR60_RS14950 NONE
CWR60_RS14945 3141254 .. 3141312 -  -2.9  -4.56597   GCCTTGCGCCAAAAA TCCCATTGTGCCGCAC-GGGCCGCGCGGC CGG GCCG-GTAGCCCTGCGCCCGGCAAGGGGA TCAGGCTGCCGCGGG  69 76
CWR60_RS14940 3140340 .. 3140372 -  -9.7  -3.06671   AGATCGACCGCAACA      TGGCCATGCTGGGCG TGA CGCGCTGCACCGCCA      TGGCGCCCGGGCTGC  59 67
CWR60_RS14880 3130375 .. 3130403 -  -6.5   -2.9348   TGTAAATTTTACATA        GGGTGTAGCGCGG TCG CCGCGCCCTAGCC        GCCGTGCTACGCGTC  48 32
        arsC 3128352 .. 3128383 - -24.5  -3.90112   CGGCCGTCAACGAAA      GCGGCCTGGCGCG TCTTGC CGCGCCAGGCCGC       AATCACTCGCCCTCA 100 70
CWR60_RS14850 NONE
CWR60_RS14845 3124045 .. 3124076 -   -10  -2.81547   CCTGCAGATCAACTA      TGCGCTGGACGACC GCCA GGCCGCGCAGCGCC       TGTTGCCGCTGGCCG  56 306
CWR60_RS14815 NONE
CWR60_RS14810 3118749 .. 3118761 -  -4.8  -2.75992   CGCGAGGTAACACGA                CGCT ACCTG AGCG                GCCCCGCCAGCAGCA  43 15
CWR60_RS14805 3115226 .. 3115259 - -18.1  -2.58544   GTGGACCCGGACAAC     CGCCGCGCCGTG-GAC TAC GCCGCGCGGCGCGGCG     CGCTGGCCAGTCTCG  85 444
CWR60_RS14750 3096125 .. 3096149 -  -3.6  -3.03124   GCTGATCCGCGAATA         CATCGACGCGGA AGA CCCGCG-C-ATG         CCCTTGTCGGATGTG  43 183
CWR60_RS14740 3093182 .. 3093202 -  -4.6  -4.65895   CGCCGGACGGAAAAA           GGC-CGCTG ATCG CCGCGCGCC            GGTCCGCGTAGGGGC  75 245
CWR60_RS14725 3090400 .. 3090416 -  -3.6  -3.30124   GTTGAGTTGTTATAA              GCGGAC TGACC GTCCTC              AGCCGGGCGAACCGG  47 24
CWR60_RS14720 3088746 .. 3088803 -  -3.1   -4.2679   GAATTTGCACGAAAA CGATCTCCTACGT-GCTGCGCGGCGCCA TGG CGGCGCCGCGCGGCGACTCAGTTCTTGG ATATTCCCCAGAATA  63 15
CWR60_RS14715 NONE
CWR60_RS14710 NONE
CWR60_RS14705 NONE
CWR60_RS14700 3083934 .. 3083952 - -17.4    -5.252   CATGGCCATAAAAAA             GGCCGGCC AGC GGCCGGCC             CGCAGCGCGTCGCGC 100 42
CWR60_RS14695 NONE
CWR60_RS14690 NONE
CWR60_RS14685 3080140 .. 3080167 -  -3.2  -3.14132   CCTGCGCGGCATGAA        CCGTCAGGGCCG ATAC CAGCGCCGGCAG         GAAGGCCCCGCTAGG  44 36
CWR60_RS14680 NONE
CWR60_RS14675 NONE
CWR60_RS14670 3076846 .. 3076871 -    -6  -4.15044   TCCTGCGTGAAGAAA         CGCCTGCCGA GGCTTA TTGGCTGGCG          TAGAAACTGACCAAT  66 13
CWR60_RS14665 NONE
CWR60_RS14660 3075370 .. 3075401 -  -8.7  -2.94218   ATTTTTGATTATAGA     GGGTCGGCAG-GCCG ATGC CAGCGCCGCCG-CCC      TACTCCTTGCCCGGA  54 25
        alaS NONE
CWR60_RS14650 3072421 .. 3072448 - -21.4  -3.01712   GCTCGCGCGCCAAGA        CAAACGGCCCGC TTGC GCGGGCCGTTTG         CTTGCCGGCAGGCGC 100 41
CWR60_RS14640 3071118 .. 3071136 - -10.2  -4.55295   TTGCGGACAAAGAAA             GCGCTGGC ATA GGCAGCGC             TTTCAAGAAATGCAG  89 139
        rimM NONE
        trmD 3069301 .. 3069313 -  -9.1  -4.08216   CGAGTCGGCCGAAAA                CAGCG TGG CGCTG                CGCTGCGGGCTGGCC  72 400
CWR60_RS14605 3064921 .. 3064947 - -23.8  -3.17075   GGCGCCTGAACGCAA         GGAACCCCCGGC GCG GCCGGGGGTTCC         TGCCCATGGCAAGCG 100 85
CWR60_RS14595 NONE
        rlmN 3059851 .. 3059882 -  -7.8  -2.55213   GATCGAGCGAATCGA      CCACGGCCTGGGCG TCGG CGCCCAGCATGCGG       GCGTAGTTGCGCACC  50 252
CWR60_RS14580 NONE
CWR60_RS14575 NONE
CWR60_RS14570 NONE
        bamB NONE
         der NONE
CWR60_RS14555 3052594 .. 3052608 -  -9.2  -2.52464   GTTTGTTTTAAGTGA               CGGCAC AGT GCGCCG               AAATCAGTACTTACA  54 117
CWR60_RS14550 3052269 .. 3052298 - -17.2  -4.36595   GAGCCAAAGCGAAAA       TGCCCGCCGGCGC TGGCC GCGC-GGCGGGCA       ATCAAGGGTAATGCT 100 53
        hflX NONE
        hflK NONE
        hflC 3048818 .. 3048847 - -19.3  -4.98531   TGCCCAAACGAAAAA       CGGCTGAGAGGGC GTAA GCCCGCTCAGCCG        TATGCGGAATGTTTT 100 122
CWR60_RS14530 3047542 .. 3047552 -  -6.8  -2.55896   TTTACGAATCAATAT                 CGAG TTT CTCG                 GGAAATCCGGAAATC  47 76
CWR60_RS14525 3046193 .. 3046226 - -18.1   -3.9461   CCTGGCGAATAATAA     CCG-AGGCCGCGCCAC AAC GGGGCGCGGCCCGCGG     CGCCCTACCCCTTGA 100 30
CWR60_RS14520 3045396 .. 3045406 -  -3.2  -3.23452   ATGGCGACAAGCTAA                 GACA ACT TGCC                 GCATCAGTAGCACAG  46 197
CWR60_RS14515 3045052 .. 3045081 -  -6.5  -3.16055   CAAATCCTGGATGAA       TGATTCTGGAATC AATA GATTCGGGAATCA        GGCATCAATACAGGC  51 30
CWR60_RS14510 3042762 .. 3042807 -  -5.4  -4.24002   CCGCAAACCGCAAAA GGCCATGCGCCGGC-CCGGCAC ATGA ATGCCGCCACCCGC-CATGACC CTGCGCACCGCGCGT  69 233
        rpoD NONE
CWR60_RS14500 3039917 .. 3039938 - -15.9  -5.27023   ACGCGAAAAAGAAAA           CAGCCGCCA TTGC TGGCGGCTG            TAGGTACCTGATTTC 100 53
CWR60_RS14495 NONE
CWR60_RS14490 3039076 .. 3039097 - -15.9  -5.07652   CGCCGGAAAAGAAAA           CAGCCGCCA TTGC TGGCGGCTG            CGGAAGGACTTGCAC 100 75
CWR60_RS14485 3038277 .. 3038298 -  -3.5  -3.54307   AAGAGTCCTTGCAAA           TCCGCCGCC ACAT GGCGGCTAC            CCCGATACCACGGAC  51 130
CWR60_RS14480 3037725 .. 3037736 -  -5.8  -3.21099   CGCGGCGATCAGGAA                GTCG TCGC CGAC                 GCGCTGCGCCGCCGC  50 141
CWR60_RS14470 3035851 .. 3035867 - -10.1  -3.01712   CGCCCTGCCCGAAGA              CCAGCGC AAG GCGCTGA              TCGCCAAGCAGCGCG  59 231
CWR60_RS14435 NONE
CWR60_RS14430 NONE
CWR60_RS14425 NONE
CWR60_RS14420 3027010 .. 3027023 -  -2.4  -4.25658   AGGCGATGAAAATAA               TCGT TGTCAT ACGA                GGCGTTCCCGTCGTG  62 43
CWR60_RS14415 NONE
CWR60_RS14410 3025505 .. 3025539 - -11.2  -2.73875   TCTGCGGCAAGACTA     GCGCCAGGCGGCGCGC AAG GCGCGCCGCCCCTCAT     GCCTGGACGATCAGC  60 22
CWR60_RS14380 NONE
CWR60_RS14375 3015999 .. 3016013 -  -8.5  -4.05788   CGCCGGGAAAGGAAA               GCCGC GCCGG GCGGC               TAGTCGACCTTGGCT  72 25
CWR60_RS14370 3014604 .. 3014634 -  -4.5  -4.17523   AAATAATGCCGAAAA       CGGTCTCCACCCC GTTAT GGGCAAGAGTCCG       CGACCAGATGCCCTG  66 69
CWR60_RS14360 NONE
CWR60_RS14355 NONE
CWR60_RS14350 3009097 .. 3009123 -  -6.4  -3.59315   TGAACCAGGCCGAAA         TGGCGCGGCTGC GGC GCAGCGCCGGCA         ACTGAACCGCCGCGA  56 77
CWR60_RS14335 3006630 .. 3006674 -    -4  -3.53811   GGCATTGCCCTCAAA CTGGCGAGCCGGTGACGCGGC GCAG GCC-CGCCCTCAGGCCGCCGG CAGCGCGCAGGCCGG  51 14
CWR60_RS14315 3001355 .. 3001369 -  -5.6  -2.62263   ATGCCGCGCACAGCA               TTGCCG CGC CGGCTA               CGCGCCCCAAGCTCC  44 78
CWR60_RS14300 NONE
CWR60_RS14230 2985529 .. 2985552 -  -7.3  -3.17194   ACGTGGCCAACTGAA          CGCGCCCGC TCAGGT GAAGGCGCG           CACCGCGTTGGCGAT  52 11
CWR60_RS14185 2977010 .. 2977060 -  -6.6  -3.44146   CGCCGCGAGAACGAA GTCCTGATGCGCGCGCTGCGCA AGTTCGA TGCGTCGCTGGCGCAACAGGTC AGCGGCCCGCCGGCG  55 150
CWR60_RS14135 2967337 .. 2967393 -  -8.4  -2.52464   TTGCCGCGCAACGCA TCGGCGAGTCGCCGCTGCTGGCGCCAC GCAG GCGCCGCCAGCCGGCGCGGC-CGCCAT CCTGAGCGGCGTTGC  51 77
CWR60_RS14120 2964522 .. 2964551 -  -4.1  -3.05963   ACGCGCACGGCAACA       TCACCGGCGGCAC CTCG GTGCTGGCCGCGA        TCCGCACCATCATCC  43 432
CWR60_RS14095 2959135 .. 2959151 -  -6.5  -3.18023   CCAGCACCATGAACA              GCGGC GCCATCG GCCGC              GTCACCCCGCCCACC  51 484
CWR60_RS14085 NONE
CWR60_RS14080 2957059 .. 2957077 -   -16  -5.00884   ATGGCGTCGAAAAAA             GGCAGGCG CAG CGCCTGCC             GGCCCTGCACGTAGG 100 100
CWR60_RS14070 2954259 .. 2954271 -  -9.1  -2.72344   GCCGACGGTGAACGA                CAGCG GCG CGCTG                CTGGCGCTGGCCGGC  55 417
CWR60_RS14060 NONE
CWR60_RS14055 2950594 .. 2950620 - -22.3  -3.05384   GCGTGCGCGACGCAA         GCGGGCGCGGG GCCTG CCCGCGCCCGC         CCGCGCCTACTTGCC 100 32
CWR60_RS14045 2946804 .. 2946859 -  -6.7  -2.73468   CAATATCCTCAAGCA TGCGCGCGCGCGCCGCCT-GA-CCGTG AGCA CCCGGCTCGAGCCTGCGCACGCGGTCA TCACCATCATCGACG  46 202
CWR60_RS14030 2941502 .. 2941522 -  -8.2  -3.34895   GCCAGCCTGAAGCAA            GCCGTGGC CATTC GCCAAGGC            AAGATGCCGCCATCG  59 267
CWR60_RS14005 NONE
CWR60_RS14000 2936695 .. 2936746 -  -8.4  -2.82635   AGGCCCACGACGAGA TCGGCGG-CAAGCGCCCGCACGGCG CGG CCCAGGGCCGGCGCCTGGCCGTCGG CCAGGTAGACGATGC  54 119
CWR60_RS13955 NONE
CWR60_RS13950 NONE
CWR60_RS13945 NONE
CWR60_RS13940 NONE
CWR60_RS13935 NONE
CWR60_RS13930 2921796 .. 2921824 -  -2.1  -4.26076   TCATGGGCAGGAAAA        TCTCCGGCAGGTG CCG CGCCAGCCAGGGG        TCCTGTTCCATGTGG  62 427
CWR60_RS13920 NONE
CWR60_RS13915 2919082 .. 2919116 -  -9.1   -3.0263   ACGACCGCGCCAAGA     TCGTGACCAGCCGGC TCGGC GCCGGCCGGTTCCGG     GTGGCCGGCACCGCC  55 341
CWR60_RS13895 2914799 .. 2914829 -  -5.3  -3.35992   AGCGAGCGCAAGGAA      GCCGCCGAGGCGCTG TCG CGGCGCA-CGGC-GC      AAGCCCGCATCTAGC  53 36
CWR60_RS13870 NONE
CWR60_RS13865 NONE
CWR60_RS13860 2908053 .. 2908065 -  -4.8  -3.01712   CGCGGGGGTGGAAGA                CTGG GCGCG CCAG                CACGATATCGTACTG  46 363
CWR60_RS13850 2906736 .. 2906770 -  -2.7  -3.82378   ATTGATCGAGAAGAA    GTCCATCGTGCACGCG CTGT CGC-CGCACGGTCGGC     GCGTCACGGTCAGCA  56 333
CWR60_RS13830 2902570 .. 2902596 - -13.6  -2.57132   TCGGGCGGCCAGAAG         CAGCGCGTGGCC ATC GCCCGCGCGCTG         GCCATGGAGCCGGAC  67 325
CWR60_RS13820 NONE
        napA NONE
CWR60_RS13810 NONE
CWR60_RS13805 NONE
        ccmA NONE
        ccmB NONE
CWR60_RS13790 NONE
        ccmD NONE
        ccmE NONE
CWR60_RS13775 2893805 .. 2893838 -  -3.8  -3.04144   CCGCCAGCGGCAACA     GGTAGCGCAGCA TCAGCCGGCC TCCCGCGCCACC      GCCGTCACCGCTTGG  44 4
CWR60_RS13770 2893273 .. 2893320 -  -2.6  -3.38272   CAGCAGCAGCCACAA CCCCAGCAGC-AGGGCCGCGCG CCTCAT CGCA-GGCCCTCGATGACGGGC AGCAGGCGCTCGCGC  46 1
CWR60_RS13765 NONE
        ccmI 2891567 .. 2891577 -  -2.4  -3.05844   GCGTGGACGGCAAGA                 CGGC ATG GCGG                 CTATTCCTCGGACAG  41 99
CWR60_RS13755 2891085 .. 2891104 -  -2.8   -2.7563   AAAAAGTCCGAAGCA            GCCATTCTC GGG GCGA-TGGC            GCGGCAGGGCAAGCC  40 80
CWR60_RS13750 2890367 .. 2890398 -  -5.7  -3.30214   AATCGACTACATCAA      CGGCGCCATCC-CC AGGCA GGCGGCCCGCGCCG      GCATCCAGGCCCCGG  51 250
        leuD NONE
CWR60_RS13720 2883794 .. 2883823 -  -7.9  -3.05844   GCTTCGACGGCAAGA       CGCTGATCCATCCG CGC CAGATCGA-CAGCG       CCAACGCCGCCTTCG  53 310
CWR60_RS13705 NONE
CWR60_RS13700 2877653 .. 2877664 -  -7.2  -3.53012   CGGCTTCGCTGGAAA                GCGG CTAC CCGC                 TGGCGCTGTCCGAGC  58 426
CWR60_RS13675 2872667 .. 2872695 -  -8.2  -3.34715   GACCCGCGGGAAATA       GCTGGCGCCATTC TCGA GAATGGCGA-AGC        GGTTGCCGTCGCGCC  58 50
CWR60_RS13665 2870609 .. 2870640 -  -8.5  -3.21099   GCGCCGCAGCAGCAA      GCGCCGTGCCCGG GCTCAA CCGGCCGCCGCGC       GCCGGTGGCGCCATT  56 9
CWR60_RS13660 NONE
CWR60_RS13655 NONE
CWR60_RS13650 2867917 .. 2867961 -  -6.2  -2.87132   GCTGTCGTCCACATA GCGCAGCGCGGCGGGCGCG-GC GGG GCTCACGAGCGGCGCGC-GCCC TGGCCCCGGTTGCGT  48 7
CWR60_RS13645 2866566 .. 2866593 -  -6.8  -3.53012   TCTCCTGGGGGCAAA        CCACGCATGCCG CAAG CGGCGAGCCTGG         CACGCCGCGCTCAGA  58 353
CWR60_RS13635 NONE
CWR60_RS13630 NONE
CWR60_RS13625 2864443 .. 2864461 -  -3.8  -3.66178   CCGCGCAACGCGAAA             TGCAGC TTGCCGC GCCGCA             AGCCCTGGCGCGGAT  54 417
CWR60_RS13615 2861161 .. 2861204 - -10.1  -3.30124   GCCCATGCTGCAGAA CCTGCTGCAGGACGCCCGGC GGCTG GCCCGGCCGCC-GCCGCAGG CCGAACCGCGCAAGC  63 137
CWR60_RS13595 NONE
CWR60_RS13590 2858108 .. 2858118 -  -4.6  -3.35371   GACATCGCCAAGGAA                 CGCC TCA GGCA                 GGCCGGCGGCTTCGA  51 174
CWR60_RS13575 2856064 .. 2856102 - -10.3   -2.9914   GAGCTGTGACAGAGA  CCGCAACGGC-CGTGCCGC GGG GCGGCACGCGAC-TTGCGC  ACTGCGGCCGGCGAG  60 450
CWR60_RS13550 2851089 .. 2851101 -  -6.2  -3.73953   AGCAGGCCGAGCAAA                GCGG AATAG CCGC                CTTGAACACCTTCGC  61 184
CWR60_RS13475 2835337 .. 2835369 -  -8.9  -4.07568   GCGCTTTGGCGAAAA      GCCCGCCGACCGCGC CGC GTACGCGCGGCAGGC      CCGCTTCCTGGCGGG  72 179
CWR60_RS13460 2832790 .. 2832812 -  -4.6  -3.53012   TGCGGCGGCGCGAAA           CTCGGCCCGC GCG GCCCGCCGCG           CAGCGCATCCAGGGC  52 72
CWR60_RS13455 2831344 .. 2831390 -  -2.8  -3.65535   TGAAACAATAAGTAA CTGTTG-CGCGGACCAGCCCG GATCGA CGCGCCGGCTGGCGGCTACAG CGTGCCGGGCAGGGG  53 20
CWR60_RS13450 2829473 .. 2829501 - -10.9  -4.59773   TGGGAGCTTGAAAAA        GCCGGATTGGCGC AGC GGTCCAACCCGGC        GGGGGATGGTTGTCA 100 38
CWR60_RS13405 2820754 .. 2820768 - -12.8  -2.70932   CTGCTTGTGCAATCA               GGCCCG GCG CGGGCC               TAGGAGAGGGCTTCG  65 25
CWR60_RS13400 2819204 .. 2819226 -   -17  -5.47218   CGCGAGGCAAAAAAA           GGCCCGACAC ATC GTGCCGGGCC           CGTACGGGGCACGCA 100 242
        rdgC 2817475 .. 2817500 -  -6.7   -4.4767   TGATCGAGCAGAAAA         GCACG-CTGGCC GAG GGCCTGGCGGGC         GCGGACGTCATTTAC  75 434
CWR60_RS13365 2814409 .. 2814456 - -21.2  -4.15788   AACGTGCTCAAGAAA GGGGCTGAGCAAGGCGGCCGGC AGGC GCCCGCCGGCATGCTCAGCCGC ACTGGCGCTGGATCG 100 18
CWR60_RS13350 2811715 .. 2811727 -  -3.4   -4.2349   CGCGTAGATCGAAAA                TTCC TCGCT GGAA                CAAGGACTTGTCCGG  63 69
CWR60_RS13340 NONE
CWR60_RS13335 NONE
CWR60_RS13330 2809538 .. 2809590 -    -9  -2.71144   GACCGCGCTCAACGA GGCCAGGCC-CGGCGATCCGCGCGAT ACC ACCACGCCGGCCGCCATGGCC-GGCA ACCTGCAGCGCCTGT  52 363
CWR60_RS13320 NONE
CWR60_RS13315 2807943 .. 2807964 -  -2.9  -3.39556   AACGCCTTAACAATA           GCGTGCC GATTGCGT GGCATGC            AAGAACCGATGCACG  48 79
CWR60_RS13310 2807137 .. 2807163 -  -3.5   -5.1101   GGAGGAGGGAAAAAA         GTGTTGCCGGG GCAGG CCCGGCGACGA         TTGTGCGGCGCGCCG  81 44
CWR60_RS13305 2806582 .. 2806601 -  -4.8  -3.67597   CTTCGTACTCAACAA            CGCGGGCC TGAT GGCGGGCG             TGTCGATCGAAGGCG  54 167
CWR60_RS13245 NONE
         amt 2796111 .. 2796160 - -14.2  -3.15249   TACACCTGGTAGGAA GCGTATGGCGCGACAACGGGGGC GCAAT GCCCCCGTTGTCGC-CTTGTCGC TCAGCTGTGATAAGC  73 26
CWR60_RS13230 2791631 .. 2791646 - -10.4  -3.57144   CGTTCGATTTCCAAA              CCGCCT CTCG AGGCGG               TTTTTTTTTGGTTCA  67 38
CWR60_RS13150 2766109 .. 2766129 - -15.4    -5.093   TGCAAAATAATAAAA            GGCGGGGC ATGCA GCCCCGCC            TCAAATAATAACGAC 100 92
CWR60_RS13145 2765509 .. 2765524 - -10.4  -4.62069   CGGGCATGGCAAAAA              GGAGCC GTAA GGCTCC               TTTTTTGCGTTCCGG  93 81
CWR60_RS13120 NONE
CWR60_RS13115 NONE
CWR60_RS13110 2758148 .. 2758174 -   -15  -3.60865   GATTCTAAAGCAGAA         CGCCGGCTGCGC GGG GCGGCGCCGGCG         CGGCCGGGTCAGGGT  81 34
CWR60_RS13105 NONE
CWR60_RS13100 2757066 .. 2757082 -  -2.1  -2.64099   CGGTCCGAGCAGAAT              GAGACGC ATG GGGGCTC              CTGATGGGTTTGTTT  38 108
CWR60_RS13095 2756354 .. 2756412 - -13.8  -3.39895   TTGGCTAGCAATGAA GGCGGGCAGGGCG-CGCG-CGGCCGCGCA CCCC TGCGCGGGCGGCGCGGCGGCCT-CGCGGC GCGGTTTAGCTCTGC  77 31
CWR60_RS13090 2755529 .. 2755557 - -18.2  -2.84602   GCCAGGGTACCAAAG        CAACGTGCCGGC ATCGA GCCGGCACGTCG        GGGGGAGGGATTACT  86 36
        murJ 2753857 .. 2753889 -   -12  -4.20516   TGTCGATCCAATAAA      TGCAAAGACCGGCC GTAAG GGCCGGTCTTTGTT      GTGATTTTCACTATT  91 74
CWR60_RS13075 2752298 .. 2752315 - -11.3  -5.45802   GCGCCAAAACAAAAA             GGATGCC CGCG GGCATCC              TTTCTGCTCGCCGTA 100 69
CWR60_RS13040 NONE
CWR60_RS13035 2744186 .. 2744212 -  -8.7  -3.53012   CTGCGGTGCGCCAAA        GCGCGC-CGC AGGCCGGG GCGGGCGCGC         CTATTCGAGCTGGAT  62 26
CWR60_RS13030 2743105 .. 2743141 - -10.2   -4.2558   GATTGTCCAGGAAAA   CGCGCCAATTTCCGC TTGATTGG GCGGGA-TTGGCGCG    CAATGGGCAGGCGCC  85 41
CWR60_RS13025 2742216 .. 2742226 -  -2.4  -3.01497   GCAGCCGAAAGCATA                 GCCG TTC CTGC                 CCCGGCCGCCTTACT  41 36
CWR60_RS13020 2740782 .. 2740814 -  -3.2  -4.72272   GTTCTCCACGAAAAA     GGGGGCG-GAACCGG AGGG CCGGCGCGCGCCGGC      GGCGTGCGCCGGCCG  75 476
CWR60_RS13010 NONE
        argF 2738461 .. 2738485 -    -5   -2.7676   GAAACGCCAACAGGA          CTTTGACAGC AACGG GCCGTCAAAC          AAGAAGTCTAACGGG  43 126
        argG 2737052 .. 2737081 - -23.7  -4.26344   ACACCTGCAGCAAAA       GGGTGCCTGTCCC GGCA GGGACAGGCACCC        CCGCGGCGGTTGCCG 100 42
CWR60_RS12935 2723983 .. 2724019 - -20.4  -3.34517   ACGGCGCGGCAAAGA   GAAAGCCCCGG-CAATC ATGC GATTGACCGGGGCTTTC    ATGAAGGCAGGCCAT 100 60
CWR60_RS12925 2723048 .. 2723068 - -10.4  -5.95539   GCGCAAAGAAAAAAA           CCCGG-CGC TTGC GCGACCGGG            GTTTTTTGGCACATC 100 66
CWR60_RS12915 NONE
CWR60_RS12910 2720094 .. 2720104 -  -4.6  -2.92371   ATGGAGGCAACCATA                 CCAG ATG CCGG                 TTTACGGCTGGCTGG  44 53
CWR60_RS12905 2718145 .. 2718177 -  -3.2  -3.05844   TGTTGCACGCCAAGA      CGGCGGTGGTCGAC GGCGT GTGGTCCACGGTCG      GGTCGAGCAACATGG  43 244
        egtD 2714708 .. 2714722 -    -7  -2.71011   ACGGGCGGGTAAGCA               GGCCGC GCT GCGGAC               GCGGGTGGCGGGCGC  48 366
CWR60_RS12880 2713505 .. 2713536 - -20.4  -4.37886   TCATCGCGCACAAAA      CAAAATGCCCGCAA GCGA TTGCGGGCATTTTG       TTTTGAATTCTCTAG 100 38
CWR60_RS12865 2712014 .. 2712054 -  -2.2  -3.58536   AAATTGACGGCCAAA  GCCGCCTCAGTCCCCACG AATGG CGCGCCGGCCGCGGCGGT  AGACTGGCGCAGCCT  50 309
CWR60_RS12855 2711245 .. 2711300 - -13.9  -4.11216   CCGTTACGGTTAAAA GTCGCCCTGCGCGGCCCTGGCGCCGA ATATG TCCACGATAGGG-CGCGCAGGGCATC AATAGGCAAGACTGG  85 77
CWR60_RS12850 2709748 .. 2709758 -  -8.2  -3.14132   CCGGCCGCTGACGAA                 GCGC GCC GCGC                 TAGTGCTGGCCGGAC  56 25
CWR60_RS12830 NONE
CWR60_RS12825 2705485 .. 2705500 - -10.4  -6.23209   TGAACCAAAAAAAAA              CCGGTC GCGC GACCGG               TTTTTTTTCGTTCGT 100 58
CWR60_RS12820 2704134 .. 2704147 -  -9.5  -3.62255   CGCAAGAAGAAGTAA               GGCGG CGCG CCGCC                CGCGCCCGCAAGGCA  64 50
CWR60_RS12805 2701422 .. 2701441 -   -15   -4.8622   GCCGGCAATGAAAAA            GGCGGCTC ATGC GAGCCGCC             TTTTTCATTGCGCGC 100 49
CWR60_RS12785 NONE
CWR60_RS12780 2696227 .. 2696255 - -14.6  -5.40072   GGCCGGCGAAAAAAA       GCCCCGCTGG-CG TGGT CGTCCAACGGGGC        GGCTGCATGGCGGGC 100 78
CWR60_RS12775 NONE
CWR60_RS12770 NONE
CWR60_RS12765 2692862 .. 2692874 -  -4.7  -3.55622   GGGAACTGCTGGAAA                GCGGC GAG GCCGA                TGCCTGGAGCCTGGA  54 334
CWR60_RS12755 2689740 .. 2689750 -  -6.8  -3.31144   TCGCCATGGTCAGAA                 CGAC ACC GTCG                 CCGTGGCGTAATAGG  54 9
CWR60_RS12750 2688340 .. 2688356 -    -5  -3.15544   GGCCATCGTCATGAA              CGCCTC GGGTT GCGGCG              CCATGGTGAAGGAGT  47 489
CWR60_RS12725 2670084 .. 2670121 - -14.2  -3.61398   TGTCGGTTTCAAGAA   CGGCACCGACGGCAAT GTGAAG ATCGCCGTCGACGCCA    TCAAGGCCGCCTCGC  78 523
CWR60_RS12705 2666425 .. 2666446 - -18.7  -5.06414   GCGGCGCAATAAAAA           CGGCGCGCC TTGA GGCGCGCCG            GCATTCCGGGACGAA 100 49
        pepN 2662873 .. 2662885 -  -3.3  -2.74192   TACGTTTCAAGAGTA                GCTCC TAA GCAGC                CAGATCCAAGGCTTT  40 17
CWR60_RS12690 2661528 .. 2661538 -  -3.2    -3.727   CGCACTACAGTGAAA                 CGAC ATT GTCA                 CTTTGGAGATTGCCC  53 335
CWR60_RS12665 NONE
CWR60_RS12660 2656308 .. 2656320 -  -3.3  -3.07233   TGACAATGGGCAATA                TAGGC TTA GCCGA                TGCTCTTGGCGGCTT  42 18
CWR60_RS12655 2654571 .. 2654590 - -13.6  -5.40072   CGCCGGGCAAAAAAA            GAAGGCCC CGCA GGGCCTTC             TTCCGGCATGGGTGG 100 44
        pdxA NONE
CWR60_RS12645 2652015 .. 2652045 - -11.1  -3.06183   CTCAGCTCGATGGAA      GTGCGCGCCCG-CGC GCG GCGCCTGGCGCGC-C      AGTGCGGGCAGCTGG  62 459
CWR60_RS12580 2640816 .. 2640834 -  -5.8  -3.14931   TCGAGGCGTTAGCAA             GCGTGGCC GAT GGCAGCGC             CGGGCCCGGGCAAGG  49 98
CWR60_RS12575 NONE
CWR60_RS12570 2638032 .. 2638074 -  -8.2  -3.42503   TGCCAATACGCAGAA CCCCCCCAGGCTGGCCGTCA ACG TGACGGCCGGGCTGCGATTG CTCAGCCAGGCCCTG  61 369
CWR60_RS12560 NONE
CWR60_RS12555 2634364 .. 2634378 -  -7.8  -2.82516   CGGTCGACGACCAGA               CCACGG TGG CCGTGA               TGCACTCGGGCGTGG  49 102
CWR60_RS12525 NONE
CWR60_RS12520 2626656 .. 2626680 -  -2.8  -3.42503   GCCCAATACCGAGAA         CCTGCAG-GCC GATG GGCGCTTCAAG          GCGCCGGCCCAGCTG  47 249
        htpX 2624047 .. 2624066 - -16.4  -4.18018   TTGGCCCATGCAAAA            CGCGCCCC TTGC GGGGCGCG             TTTTCGCTGGCGGAC 100 53
CWR60_RS12490 2621049 .. 2621075 -  -9.4  -2.52896   TCATGCCGGAATTTA         CTGCCTAGGCAA CTA TTGTCAAGGCAG         TTCATGGCCGGGCAG  54 46
CWR60_RS12485 NONE
CWR60_RS12480 2618925 .. 2618935 -  -4.6  -3.08073   AGCACGGCGAACACA                 CCGG TTG CCAG                 CCACAGCAGGCGTTT  47 94
CWR60_RS12455 2611210 .. 2611257 - -14.7  -2.87344   CAGTTGCTCGACATA GGCCGCGTCGCCGGCGCCGGCC TGGCC GGCCAGCAC-GGCGGCGGGGTC GCCCGGCGCTATGCG  73 244
CWR60_RS12445 NONE
CWR60_RS12440 NONE
        gabT NONE
CWR60_RS12430 NONE
CWR60_RS12425 NONE
CWR60_RS12420 NONE
CWR60_RS12415 NONE
CWR60_RS12410 2601360 .. 2601416 -  -3.7  -3.53012   GCCTGCGCCGTGAAA CGGTGGCGCAGCTGGCGGC-CAAGA TCCGCGCCT TCCTGCGCGGCGAGCCG-GTCACCG GCATGGTCACGCGCC  49 65
CWR60_RS12400 2598741 .. 2598759 -  -7.3  -3.61398   GCCCGCGGGCAAGAA             TGGCGCG CCGGC CGCGCCC             GCCGAGGAGGGCGGG  60 272
CWR60_RS12390 2596506 .. 2596524 - -17.4  -3.55622   GGCAAGGCCGGGAAA             CGGGCGGC ACG GCCGCCCG             GACGGTTATTGCGCT  89 31
        purD NONE
CWR60_RS12380 NONE
        nadD 2593563 .. 2593575 - -10.5  -3.93489   TAACGATAAATATAA                CCCGC GGC GCGGG                TGTAGATGTGGCGGA  77 61
        rsfS NONE
        rlmH NONE
CWR60_RS12360 2591570 .. 2591600 -  -7.5  -2.73364   GGTCGATGCCAAGCA      CCGCAGCCACG-GC CTGG GCGCGTTGCTGCGC       GGCGGGCGCCGTATC  49 470
CWR60_RS12320 NONE
CWR60_RS12315 2579999 .. 2580012 -  -3.1  -3.99678   AGCGCTACAACGAAA               CCGACA CGA TG-CGG               CTGGCGGCGCCGGCG  58 108
CWR60_RS12305 NONE
CWR60_RS12300 2574401 .. 2574428 -  -6.2   -3.3344   ATTCAACTCGGACAA        CAGCGGCTCCAG TTCC CTGAAGACGGTG         CCCGCGGTGGGTGCG  52 423
CWR60_RS12270 2570608 .. 2570628 -  -4.7  -3.62046   CCATTCGCCCAAGAA           CCTGGCCA TGGCGC TGGCC-GG            CGAGGCCGGCGAGCT  54 285
        acnB 2567038 .. 2567057 - -16.4  -4.94262   TACAGCAAAAAGAAA            GGCCCGCC TTGC GGCGGGCC             CTTTGTCATGGCCGA 100 49
CWR60_RS12250 NONE
CWR60_RS12245 2565492 .. 2565506 -  -3.5  -3.32844   TTCCCGATCCTATAA               GCCTG CCCCC CAAGC               CTATCTGCATGCCTG  47 263
CWR60_RS12230 2561653 .. 2561673 -  -8.2  -4.09864   ATCGATGCGTCAAAA            GTTCCCGC GCGAG GCGGGAGC            CGGGCCGACGTGCTC  72 108
        acnA 2558756 .. 2558779 - -19.6  -5.26875   CGTCCAACGAAAAAA          CCCTCCGGCC AGCA GGCCGGAGGG           TTCGGGTCGCGCAGG 100 59
CWR60_RS12215 2556530 .. 2556550 -    -4  -3.79687   AGGCGGCAGAAAATA           TCGGCG-CGC ATG GCGGCGC-GA           TCCGGTCAGTGGAAC  57 31
        earP 2555377 .. 2555393 -  -2.2  -2.64274   AGGCTGTCAAAGTGA              GGCC TTGAGCACC GGCC              GATCCGGGCAAAGCA  38 60
         efp 2554678 .. 2554697 - -16.4  -5.75342   CCGGCGCAAAAAAAA            CGGGCCGC GCAT GCGGCCCG             TTTCGGTTGCGCCTG 100 56
CWR60_RS12100 2534479 .. 2534498 -  -2.8  -4.07885   CAGCTTTTTTCAAAA            CGCCGGAAA ATC CCTCCG-CG            GCTTTGCGGTCTGGA  59 221
CWR60_RS12095 2532367 .. 2532383 -  -5.1  -3.06696   GCCGCGCTGAACATA              GCCTG CGGCTTC CAGGC              GATTGATCAGCGCGG  47 346
CWR60_RS12050 2520574 .. 2520616 - -10.5  -3.40403   GGGGCTGGACGACAA GCAGGTGATGCAGGCCGCCC ATGC GCGCGGCGTGC-TCACGCGC GCGCTGTCGCGCTAC  65 173
CWR60_RS12040 2517809 .. 2517852 -   -34  -3.06815   ATCCTCCTCAATACA GACGCGGGATGGTGGCGCCC ATGG GGGCGCCCCCATCCCGCGTC GAACGATCCAAACAA 100 41
CWR60_RS12035 2516274 .. 2516297 -   -21  -5.09426   GGCAAGGCGAAAAAA          GGCCGGCGCC CGAA GGCGCCGGCC           TTGCTTGCCCGCGGG 100 47
CWR60_RS12030 2515123 .. 2515153 -  -5.4  -2.71712   TGCTCGCCCTGAAAG      TCAGCCGGC-CCT GCGACG AGGTGCTGGCCGA       GGTCGTGTCCTAGGG  45 163
CWR60_RS12015 2512071 .. 2512082 -  -3.6  -2.94329   CAGGCGCAATGAAAT                CGGA TTCT CCCG                 CCGTCAATCCGGCGC  43 460
CWR60_RS11975 NONE
CWR60_RS11970 NONE
CWR60_RS11965 2498442 .. 2498477 -  -6.8  -3.14132   GTTCTGTTCGAGCAA    CTGGAAGCCGGC CGAGTGCGCGGC GCCGGCCGCCAG     GCCGGCCAGCGCCGC  52 148
CWR60_RS11955 NONE
CWR60_RS11950 NONE
CWR60_RS11945 NONE
CWR60_RS11940 2491032 .. 2491077 - -20.4  -3.01712   TGCTGCGCGGCAAGA CGCC-GCAGCAGGCGCGCGCC TGGTC GGCGCGCACCGACCGCTGGCG CTATGTGTACTGGCA  87 279
CWR60_RS11925 2488119 .. 2488137 -  -4.5  -3.29704   CGGCGATGAAACACA            GCCG-GCC TTGC AGCGCGGC             GCGTCAGCGGGGGTG  49 29
CWR60_RS11920 2485582 .. 2485615 -  -5.9  -2.78384   CGCGGCTCCAGGACA     TGGCCGCGGCGCGC TCCGATG GCGCGCCGGCGC-A     CGAGGTGGACCTGGT  46 316
CWR60_RS11885 2477266 .. 2477321 -  -6.6  -3.31144   CGGCCAGGGGGATAA CCCCTGG-TGGCGCGCCGGCGGCCGG CGGCCT CAGGCCGCCG-CGCGCCGGCCTTCGA CCAGCGGCTCGGCGT  53 0
CWR60_RS11880 2476200 .. 2476239 -   -15  -3.15544   CGGCAGGTCCAGCAA GGCGGCCAGTTCGCGCCG CAGCGC CGGCGCGG-C-GGCCGCC  GTCCACACGGTCAGC  76 484
        pgaA NONE
        pgaB NONE
        pgaC NONE
CWR60_RS11820 2461168 .. 2461182 -  -5.6  -4.20368   CTAGCCGAACAGAAA               CTGTCC AGC GGGCAG               GCCGACCTGGTGGCG  66 180
CWR60_RS11805 NONE
CWR60_RS11800 NONE
CWR60_RS11795 2458374 .. 2458384 -  -2.4  -2.54523   GCAGACTGGAATGCA                 TGGG TTA CCCC                 TGGAGGTGGGTTTTC  38 19
CWR60_RS11790 NONE
CWR60_RS11785 NONE
CWR60_RS11780 NONE
CWR60_RS11775 NONE
CWR60_RS11770 2452766 .. 2452793 - -18.6  -3.11687   GCAAGCAGTACCGAA        GCGGCTTGAGAA GACA TTCTCAAGCCGC         TTTTTTGCGCCTGTC  90 168
CWR60_RS11735 2445814 .. 2445829 -  -3.2  -4.07568   CCGCGCGGTCGAAAA              GGGC GAGTTGCG GCCC               GATACCCCGGTGGAA  60 198
CWR60_RS11650 NONE
CWR60_RS11645 NONE
CWR60_RS11640 2429665 .. 2429690 - -19.1  -4.99134   ACGCCAAATGAAAAA         GAGCCTGTCCC GACG GGGACAGGCTC          TTTTTCCCGGCGCGG 100 150
CWR60_RS11620 2425237 .. 2425254 - -12.7  -3.63515   CTCGAGCGTGAAGAA             GACGCCC GCGA GGGCGTC              TTTGCTTTTGGAGCC  77 136
CWR60_RS11610 2422785 .. 2422833 -  -6.6  -3.21924   GCACGCTGCAGAACA TCG-CGGCGGGCATCATGCTGCTG ATC CTGC-GCCCGATCCGCGCCGGCGA GTACGTGGCCCTGAG  50 489
CWR60_RS11575 2415507 .. 2415525 -    -8  -3.28791   ATTTGCCGGGGATAA             CATCGGGC GGT GCCCGGCG             GCGCCTTGCAGCCCC  56 332
        mutS NONE
CWR60_RS11560 2410904 .. 2410922 -  -4.5  -3.62096   CCCCATTAGGGGAAA             CCAGTAG TCAGG CTACAGG             AATCATTCAACGGCT  52 228
CWR60_RS11555 2410547 .. 2410568 - -15.9   -4.4078   TTCGCGCAATGAAAA           TGGCCTCCG TTAC CGGAGGCCA            TGAGCATGCCTGCCC 100 101
CWR60_RS11550 2409735 .. 2409758 - -18.2  -5.61596   AGCGGCACAAAAAAA          CCGGCAAGCC GCAA GGCTTGCCGG           TTTTTTTTGGCTGGC 100 49
CWR60_RS11525 2405264 .. 2405295 - -14.6  -3.02829   CAGAGGCGGGTAAGA      TCGAATGGCTGTAT GGGC ATACAGCCATTCGC       GCGCCTGGGGGCGAA  74 51
CWR60_RS11520 NONE
CWR60_RS11515 2403592 .. 2403606 -  -8.5  -3.35813   GTCGAGGTTAACGAA               GCCGC GCCGA GCGGC               CCCTTATTCCAGGCA  59 275
CWR60_RS11485 2397224 .. 2397234 -  -6.8  -2.98823   GCCCCGCTAGAGATA                 TGGC GTG GCCA                 GCCAGATCACCTTGT  51 6
         alr NONE
CWR60_RS11460 NONE
CWR60_RS11450 2389121 .. 2389136 -    -6  -3.53811   GTTACGTGGTGGAAA              CCGGCG AGAC CGCCGC               GGACCGCATGCTGCG  57 158
CWR60_RS11440 2386520 .. 2386536 -  -5.8  -3.42354   GAGGTGAATTCATAA             CG-GCGC TCTG GCGCACG              CGACAAGTGATTGCG  53 497
CWR60_RS11325 NONE
        sycN NONE
CWR60_RS11315 NONE
CWR60_RS11310 2367964 .. 2367974 -  -8.2  -4.35742   AGGGAACGAGGAAAA                 CGCC AGG GGCG                 AAGGCAGGTACATCG  79 224
CWR60_RS11295 NONE
CWR60_RS11290 2364109 .. 2364130 - -12.9  -3.01712   GCTCGGCCCCGAATA           TCGCCGCGC TGAC GCGCGGCGT            CTAGGTCGGCGGCGA  70 66
CWR60_RS11270 2359881 .. 2359910 -  -9.1   -4.4448   AAATCTTGAAACAAA       CTGGGCGCCTGCC GCCC GGCAGGCGCTTGG        CGCATCACGGCGCGT  84 30
CWR60_RS11265 NONE
CWR60_RS11260 NONE
CWR60_RS11255 NONE
CWR60_RS11240 NONE
         ggt 2353069 .. 2353094 -  -4.5  -2.71924   CACGGCCGGGGAAAT         CGCCCAGGCCG TCGT CTGGCTGGCCG          GCGAGCAGGCCTCGT  43 117
CWR60_RS11170 2341219 .. 2341250 - -12.2  -3.35679   CCTGGTGACCGACAA      CGGCCATGCCGCGCG GCT CGC-CTGCCTGGCCG      GCCTGGGCGTGATGA  70 216
CWR60_RS11055 2316267 .. 2316292 -  -3.1  -4.07568   TGCCGCTGGTGAAAA         GGCCGAGCCGCC GCG GGCAGG-CGGCG         GGCTACAAGCGGTTA  59 38
CWR60_RS11050 2314468 .. 2314479 -  -5.8  -3.53811   TCGATCTGCCCGAAA                CCCT GACC AGGG                 TGCAGCGGCGCGATA  57 415
CWR60_RS11020 2309726 .. 2309753 -    -4  -4.03811   GATACCAGGAAACAA        CGATGCGC-GCCA TTG TAGCGGCGCGGCG        CTAACTGGCCGCCGC  61 26
CWR60_RS11015 2309131 .. 2309166 - -14.7  -2.60512   GCGAAGAGTAATCCA    CTCTGGTGCCTGTCC CCGCGC GGACAGGCACCCGCG     TCAGACGCTCAGCGC  71 26
CWR60_RS11000 2306810 .. 2306820 -  -2.4  -3.61715   GACGGGTGGCAACAA                 GGCG AAG CGTC                 AATGAAAGTGATTAG  48 95
CWR60_RS10995 2305549 .. 2305601 -  -7.4  -3.65522   GAGTCATCCGAAGAA GTCGATGCCTGTCGGGGCCGCCGC GCCCG GCGGCGGCCGCAGCGGGGATCAGG TGCCCGGCGTGGCGA  63 21
CWR60_RS10990 NONE
CWR60_RS10985 NONE
CWR60_RS10980 NONE
CWR60_RS10975 2302122 .. 2302136 -  -3.5  -2.52896   GCAGTCCTCAATGCA              CGGTCG CGGG CG-CCG               TCTCGTCTTCGGTGG  40 3
CWR60_RS10970 2300864 .. 2300877 -  -9.5  -2.70932   CCTGGTGGCCAACCA               GCCGG CCAC CCGGC                TGCACAGCCAGCTGG  56 448
        lrhA 2292307 .. 2292319 -  -4.8  -3.14132   GTTTGCCGTCAGCAA                CGTG CTGAT CACG                CTGTGGGGACCGGTC  47 70
CWR60_RS10915 NONE
CWR60_RS10910 NONE
CWR60_RS10905 NONE
CWR60_RS10900 NONE
CWR60_RS10895 NONE
CWR60_RS10890 NONE
CWR60_RS10885 NONE
CWR60_RS10880 2280577 .. 2280594 -  -6.3  -2.66316   GGCTCGAGGACATCA             GC-TGGCA CGA TGCCATGC             TCAACACCGCGCTGA  45 230
CWR60_RS10845 2273237 .. 2273252 -  -3.2  -3.01712   TTTTTGGCCCGAATA              CCCG GCTTTATT CGGG               CCGGTGTTGCACGGC  42 54
CWR60_RS10840 2272392 .. 2272405 -  -3.1  -3.69256   ACGTACGCAATATAA               CGATGC TGT GCA-CG               GGATAGCCATAGGGG  53 163
CWR60_RS10835 NONE
CWR60_RS10830 NONE
CWR60_RS10825 NONE
CWR60_RS10820 2269172 .. 2269196 - -11.3  -3.06815   ACGTCCTTGAAGAGA          GCGGGCGGTCG TGG CGACCGCCTCC          TTACATGACCCGGCG  62 59
CWR60_RS10815 NONE
CWR60_RS10810 2267112 .. 2267141 -  -8.5  -2.71731   GGCATGCGCGAACCA       GGCGTCGACCCCGG CTT CCGAGGCC-ACGTC       GGCACGGTACGCGCC  52 243
CWR60_RS10800 2266085 .. 2266095 -  -4.6  -3.68222   TCTGAACCGCAACAA                 CCGC GCG GCGA                 TCCAGAAATACGAGC  58 98
CWR60_RS10710 NONE
CWR60_RS10705 NONE
CWR60_RS10700 NONE
CWR60_RS10695 NONE
CWR60_RS10690 2242947 .. 2242971 -  -7.2  -3.28712   CTTCGCGCGCCAGAA         GGCCATGCCGTC CAT GACG-CA-GGCC         GGCGTGTATTCCGCG  55 344
CWR60_RS10640 2232933 .. 2232945 -  -6.2  -2.92246   GCAAGCCGAATGATA                GCGC CGGTT GCGC                CTTGTTTGGACAGGG  48 51
CWR60_RS10635 2231744 .. 2231788 - -11.4  -3.15544   GCCCAGGCCGACGAA GCGGGGC-AGGCTACAGCCAG GCTG CTGACTGCCGCCTCGCCCGAC ATGCCCCTGGGCGCG  64 370
CWR60_RS10615 NONE
CWR60_RS10610 2227235 .. 2227261 - -10.1  -3.61178   TCCATGCATGCCAAA        GCCCCGATACGG ATTT CCGG-TCGGGGC         TTTCGCGTTTCTGCG  67 46
         ppx 2219074 .. 2219109 - -20.4  -2.59748   CAGGCTCAGAAGTCA    GCGGGAGCCAGTCCCC CTTC GGGGACAGGCTCCCGA     GGATCGGGTTTCAGG  95 36
CWR60_RS10545 2212258 .. 2212283 - -13.9  -3.57144   GCGGCCAGCCTGAAA         CCGGCGGGCCC GTCC GGGCCGGCCAG          ATCAAGTACTATTGC  78 34
CWR60_RS10540 2210704 .. 2210716 -  -4.1  -3.55444   GCGCGACCGTGGAAA                TCGAA GAC CTCGA                CTCGGGCGACCGCCT  51 511
CWR60_RS10530 2207625 .. 2207665 -  -3.2  -3.28712   CCTGGTGGCCGAGAA CCTGGGCCACGTGAAGGCGG TCG CCGCCATGAC-CGGAC-AGG ACCTGGACCGCTGCG  47 523
CWR60_RS10520 2205186 .. 2205235 - -11.1  -2.53876   CCGGATGTGAACGGA CGAGGGCCAGGATGCGGGGCGCGC GCG GCGCGCCCCGCGGCGAGG-CGGCG GCGCCTAGAGCGCGG  59 30
CWR60_RS10515 NONE
CWR60_RS10510 NONE
CWR60_RS10505 NONE
CWR60_RS10500 2200375 .. 2200386 -  -3.6  -4.13767   CGGGCTATGTGAAAA                CCGC CATG ACGG                 CCCACAACCCTTATG  63 409
CWR60_RS10490 2198308 .. 2198345 - -16.9  -2.52464   CCGGTTCTGAACGCA   GCGCGCGGGCGCGAGGCC GCC GGGC-CGCGTCCGCGCAC   CGCGTCGGGGGGACG  79 103
CWR60_RS10465 NONE
        recJ 2189280 .. 2189291 -  -7.2  -3.66288   CAGTTTGTAACAGAA                GGGC GGCG GCCC                 TCAGGCGGCGTGCTC  61 26
CWR60_RS10455 NONE
CWR60_RS10450 NONE
        lysS NONE
CWR60_RS10440 NONE
CWR60_RS10400 2176593 .. 2176608 -    -6  -2.50699   GCTCAAGGAAGAGAT              GGTGGC CTTT GCCGCC               GAGCATTTCGATCTG  44 407
CWR60_RS10340 2166045 .. 2166100 - -16.2  -5.05782   ACCCACGGGAAAAAA GCA-AGCCGCAAAAGAAAAGCGGAGCC ATG GGCTCCGCTTTTCGATGCCGGCCGTGC CGTGCCTACTTCAGC 100 31
        lexA 2165271 .. 2165285 - -12.8  -5.15969   CCCCAAGGCAAAAAA               GCCCCC TCG GGGGGC               AGCAAGCCCGCATAG 100 67
CWR60_RS10265 2151270 .. 2151294 - -22.9  -4.11692   CAGCGACCCGCAAAA          CCGGGCCCGGA TCA TCCGGGCCCGG          TTTTTTTTCGGCTAT 100 92
CWR60_RS10240 2144410 .. 2144435 - -14.7  -5.14563   GGCCGCATGAAAAAA         GCCCCATTGCC TCGC GGCAGTGGGGC          TTTTTGTTGCGCGCC 100 45
CWR60_RS10205 2139889 .. 2139925 - -26.8  -4.56597   CCCCGTCCGTAAAAA    GAACTGCCGCCATCCC TTGTG GGGATGGCGGCAGTTC    GACTGCGCACGCGAA 100 68
CWR60_RS10195 NONE
        dapD NONE
CWR60_RS10185 NONE
CWR60_RS10180 2135528 .. 2135538 -  -4.6  -2.64912   GGGTCAAGCCAGAAG                 CGCG TAT CACG                 TGTTCAATTGTTCGC  42 21
CWR60_RS10175 2133553 .. 2133563 -  -2.4  -3.58365   GAGTATAGGAGATAA                 TGCG TCT CGCT                 GGTTTTACGCTGCGC  48 74
CWR60_RS10170 2130162 .. 2130176 -  -7.1  -3.53012   CCCGGGCCCGGGAAA               GGCTG TATCT CAGCC               TGGCGCAAAGCCGCA  58 488
CWR60_RS10155 2126123 .. 2126133 -  -8.2  -3.04263   ACCGTATCCTCAAGA                 GCGC GGC GCGC                 TGCGTGGCGCCCGGC  55 337
CWR60_RS10140 NONE
CWR60_RS10135 NONE
CWR60_RS10130 2119827 .. 2119842 -    -6  -4.08945   AGCATGGCGGGAAAA              GGGCGC GGCG GCGCCG               CCTGTCAAAGTGGTG  66 104
       coaBC 2118390 .. 2118442 -  -9.2  -3.53174   AGAGGCGGAGAAACA GCAACTG-GA-AGCCCGGCC-GCGC TTTCTG GCGCTGGCCTGGCTGTCGCTGTCGC ATTCGCTGATCGAGG  64 191
CWR60_RS10115 2116546 .. 2116560 -  -3.4  -3.57144   GGTTCCAGGCCGAAA               CCAGCG TGA CGGCGG               CGCTGCGCGAGCGCG  51 498
CWR60_RS10105 2114652 .. 2114674 - -16.2  -3.13432   GGCAACAGGAGTGAA           GCCGGCGCCC GCG GGGCGCCGGT           ATGGGACGGAAAAGC  81 72
CWR60_RS10100 2114041 .. 2114053 -  -3.3   -3.8647   ACCCACCAGATGAAA                TTCGC CGA GCGCA                GTTCGGACCGTACCC  58 150
CWR60_RS10065 NONE
CWR60_RS10060 2107895 .. 2107912 - -14.1  -4.13767   GGTGGCACGGCAAAA             CGGCGCC TTGC GGCGCCG              TTTTTTTCGTTGCGT  85 151
CWR60_RS10025 NONE
CWR60_RS10020 2099739 .. 2099755 -  -6.5  -3.39327   CGTGTACAGCCAGAA              CGTCAAG ACG CTGGACG              CCTACTACGGTGCGC  52 363
CWR60_RS10010 2098212 .. 2098233 - -13.7  -3.54424   GCTGAGGCCGGCAAA           GGCGGCGGCG CGC CGC-GCCGCC           GGATCCTTACATGGG  78 32
CWR60_RS09995 NONE
CWR60_RS09990 2093810 .. 2093825 -  -3.3  -3.73953   ATGAGCGCGAGGAAA              GGAAA TGCGAC TTTCC               CCGATCGCTATGCGC  53 70
CWR60_RS09985 NONE
CWR60_RS09980 2092959 .. 2092984 -  -9.7  -4.15833   AGCACCACCTTAAAA         GCCGCGTCAGTC TTT GACTT-CGCGGC         TTTTTGCTTTTGGCG  75 149
CWR60_RS09905 2077340 .. 2077394 -  -8.4  -3.96148   GCTGCCGAGCAGAAA CCCGGCCAGTAA-GTCCGG-GCCGCA AGCCG CGCGGCGCCCGCCGTCTCAGGCCGGG CGCGCGCGCCGGACC  70 16
        mobA NONE
CWR60_RS09840 2064462 .. 2064476 -  -7.8  -2.62184   CGGTTCGTCAGATTA               CGCCGT CGA ACGGCA               GCACGTCGACCGGCT  50 3
        mobB 2063749 .. 2063761 -  -3.3  -4.36914   CGCTGTGGCAGAAAA                TGGGC GCG GCCGA                CGGCAATGCGCCGCC  67 162
CWR60_RS09815 2057274 .. 2057292 -    -8  -3.53012   CCTCCTTGCTGCAAA             GCGGCGGC GAT GCCGTCAC             GCGGCAGATGCTGGC  58 170
CWR60_RS09795 2053345 .. 2053365 -  -2.5  -3.31144   CCTTGACGCGCAGAA            TCTCGCTGA CTT TCAACATGA            TGTTCCTCCCGGGGC  44 60
CWR60_RS09790 2052671 .. 2052696 - -16.9  -3.12595   TGCAATGATGCAATA         CGCCGCGACGCA GAT TGCG-CGCGGCG         TGCCGCTGCGCGTGA  80 219
CWR60_RS09780 NONE
CWR60_RS09775 2049551 .. 2049561 -  -4.6  -3.30124   CGCTATCGCGCAGAA                 CGCC ATC AGCG                 GGCCGAACGCCTGGC  49 374
CWR60_RS09690 2033720 .. 2033743 - -13.8  -3.36289   GACGAGTTGAACGAA          CGCCTGGCGG CGCG CGGCCAGGCG           CCGGTGCCGATGAAC  77 82
CWR60_RS09635 NONE
CWR60_RS09630 NONE
CWR60_RS09625 NONE
CWR60_RS09620 NONE
        trxA 2011553 .. 2011594 -  -2.1  -4.06864   GGGAGATAAGAAGAA GGGTTCGGGCGGCGGGCC ACGGACG GGCCCGC-GCGGGAATCA GGGGGGAATGCGCGG  58 66
         rho 2010219 .. 2010238 - -16.4  -4.54727   GCCCGCAAAGCAAAA            CCCCCGGC GCGG GCCGGGGG             TCGGGACGGGCGTGG 100 53
CWR60_RS09580 2003655 .. 2003667 -  -4.7  -4.09243   GACATGGCGTGAAAA                GCGGC TTT GCAGC                GGGGAAAAACCGTTA  62 38
CWR60_RS09575 2002754 .. 2002766 -  -6.2  -4.11501   CCAAATACAAGGAAA                CCGC GCGCG GCGG                GTTGGCGGTGAATAT  69 244
CWR60_RS09565 1999382 .. 1999421 - -11.5  -3.05384   GTGCGGGCCATGGAA GCG-CGCCTGCAGCAGGGCG GCG CGCCC-GCC-CAGGCATCGC GCATCGTGGTGTATC  62 181
CWR60_RS09545 1994219 .. 1994252 -  -5.2  -3.14963   GGCATAACGAGTGAA     GCGCTGGACTGCGA ATTGCG TGGCAGTCTAGGGC      CTGGCCGGCGCCGTG  49 130
CWR60_RS09540 NONE
CWR60_RS09535 1992993 .. 1993003 -  -4.6  -4.07568   CGCTTCGCGCGAAAA                 CGCG TAA CGCA                 CGTGCCGGCCGCCTC  62 92
CWR60_RS09490 1981478 .. 1981501 - -11.7   -4.8622   CGCGCCAATGAAAAA          GGCCCGGCA ACGATG TGCCAGGCC           TTGATCAACGATTTG 100 39
CWR60_RS09480 NONE
CWR60_RS09470 1977413 .. 1977438 -  -3.1  -4.52857   ACCGTCGACACAAAA         GGGCCGTTCAC GCAA GTGAGCGGCTT          TTTGTATTGCGCTTG  69 70
CWR60_RS09460 1977011 .. 1977032 - -17.3   -4.8622   GCGCCCAAGCAAAAA           GGGCAGCCC GGAT GGGCTGCCC            TTTTTTTCTGGTGCC 100 34
CWR60_RS09440 1973990 .. 1974004 -  -3.4  -4.07568   TGTCGCCCGGGAAAA               CCGGCG AGT CGGCAG               AAACCGGCGGTGAAA  59 146
        kynA 1972443 .. 1972467 -  -4.2  -2.70932   GCGTGGCGGCAACCA          GGATGCGCCG TCTGG CAACGTATCC          AAAAAACAACCCTGC  41 85
CWR60_RS09425 1972044 .. 1972059 - -10.4  -5.86061   CGCGAGGAAAAAAAA              GCAGCC CGCA GGCTGC               TTTCTGGTGCGCCTC 100 58
CWR60_RS09420 1970021 .. 1970037 - -13.7  -2.74012   CCAGGATGGGAATGA              GGGCGTG CAC CACGCCC              ATCAGGCCGACGAAA  69 228
CWR60_RS09385 1963350 .. 1963366 -  -9.3  -2.73364   CCGTCACCGTAATCA              GCGCGCC GCC GGCGTGC              CCAGGCTGGCGGCCA  55 6
CWR60_RS09380 NONE
CWR60_RS09375 1961668 .. 1961700 -   -17  -3.01791   ATTCGGCCGCCAAGA     GCGCCCTGGT-CGGG TGCA CCCGCACCTGGGCGC      TGGAACTGGCCGAGT  82 290
        hpnC NONE
        hpnD NONE
CWR60_RS09350 1956370 .. 1956391 -  -3.6  -3.61517   ATTGCGGCTCAAGAA           CCACGCCG CGACGC CGGCCTGA            GGAGTTGCCGTGCTG  51 438
CWR60_RS09325 1953238 .. 1953248 -  -3.2  -3.45366   CGGTCAATGAATGAA                 TAGC AGT GCCA                 GCACGACCGGGATGA  48 3
CWR60_RS09320 NONE
CWR60_RS09315 1951568 .. 1951583 -  -6.1  -3.13566   ACAGCACATGGAACA              GCGCT TCGGGC AGCGC               CTGCCAGCCCGTCGC  51 300
CWR60_RS09305 1949332 .. 1949361 - -10.7  -2.82987   CGAAGATGGAGGAGA       CCGGTGCGTT-CCC GCT GGGCAACACGCCGG       CCGAGTTCGCCGCGC  61 121
CWR60_RS09290 1945442 .. 1945454 -  -4.7  -2.72344   CGGGATGTGCAAGCA                GGCGG CTG CGGCC                GGGGAGATTGTCCAT  43 499
CWR60_RS09270 1942287 .. 1942311 -  -3.4  -3.30771   CGACATCCGGCACAA         GGTGCGGCTCG ATGG CGGGC-GCGCC          GAACTGGCCGTGGGG  47 219
CWR60_RS09255 NONE
CWR60_RS09250 1935134 .. 1935165 -  -2.7  -3.14931   GGCAGCCCGCATGAA      TCCGGCGGGCCAC GAGGTG GAGGTCCGCCCGC       AGGGCTGGCGGTTCG  43 367
CWR60_RS09215 1931688 .. 1931711 - -14.6  -3.21416   GAGCGCTACCAGGAA          GCGCTGCGCGC CTG GCGCGCA-CGC          CATCCCGAGGCGGCC  77 66
CWR60_RS09195 NONE
CWR60_RS09190 1928075 .. 1928102 -   -14  -4.56597   TTGGTTGTCGAAAAA        GCCGCGGCGGGC GCGA GCCCGCCGCCGA         TCGGGTTGCGCTCAG 100 37
CWR60_RS09185 1927152 .. 1927191 - -15.1   -2.9162   GAACTCCGGAAACGA CTG-CGCGGCG-GCGCC TTGGTGGG GGCGCACGCCGCGGCAG  GATGGCGCGCCAAGG  73 69
CWR60_RS09180 NONE
CWR60_RS09175 NONE
CWR60_RS09170 1924931 .. 1924963 -  -8.9   -2.9296   GAAAGCCCAACCATA      CCATCGCCCCGCGGC GCC GCCGCCATGCGCCGG      TTCATGGCGCCGCGG  54 65
CWR60_RS09165 1923633 .. 1923680 - -10.5  -3.61517   ACCTGTGTCGAATAA CGCACGGGCCGCCGGCGCACGCG CGGG CGCGCACGCCAT-GGCC-GCGCA AGGCGGCCGCGGTGC  67 300
CWR60_RS09160 1922571 .. 1922609 -  -7.4  -3.08679   GTCCGGCATGGAAGA  GGCGG-GGCGGCCGGC TCCGGGTTC GCCGGC-GCAGCCGCC  GGTCAGGGCGGCGAT  54 162
CWR60_RS09150 1921394 .. 1921411 -  -7.7  -3.28712   GGCGCGCGGCTACAA             GGCGCAGG CGG CCT-CGCC             CTACCTGCTGGCCTA  55 320
CWR60_RS09140 1919279 .. 1919296 -  -2.6  -3.06815   AGGTGCGCCAATATA             CCAGCG GGCGGG CGCTTG              TGGGCGGGTCCAGGT  41 41
CWR60_RS09135 1917034 .. 1917047 -  -3.7  -3.05384   GCCTCGCGGATTGAA               GACGG ACTT CCGGC                GCGCAGCGTCAGGAA  44 92
CWR60_RS09130 1915911 .. 1915952 -  -6.3  -3.02511   GCTACCGTCTCAAGA CCTGAACGGCGCGCGCCGGC TCA GCCGGCCGGCGAC-TGCTGG CGCACCCACTGCATG  49 4
        bioF NONE
CWR60_RS09050 NONE
        bioD NONE
CWR60_RS09040 NONE
CWR60_RS09035 1899929 .. 1899983 - -12.1  -3.01712   GGCTGGCGGGCAACA GCCACGTGTCGGCCGCGGCCTTGATGG GCG CCACCACGGCGGCGGCC-ATGC-TGGC CGGCGGCCCGGCTTT  66 415
        queF 1896779 .. 1896813 -  -3.5  -2.52464   TGCTGGCGCAATGGA    TCGCGATGCAGGC-GCG CCG CACCGCCTGAA-CGCGG    CTACTGGCGCGCCGT  40 26
CWR60_RS08955 1880765 .. 1880804 - -11.3  -3.28712   CCTGGGGCTGGAGAA  CCGCCTGGCCGACCGCA TCGGCC TGCTGTCGGGCGGGCAG   CGCCAGGCGGTCAGC  66 387
CWR60_RS08870 1862675 .. 1862697 -  -6.8  -2.78384   CTGTGGCCGACTAGA           CGCCCGGGGC AGG ACCCCGGCCT           TGCCACCCAGTATCT  48 273
CWR60_RS08865 NONE
        rpmG 1862044 .. 1862065 - -18.7  -4.86731   CCTTGCCAAATAAAA           CGGCCCCGC CAGG GCGGGGCCG            TTCACCATGGCGCGC 100 68
CWR60_RS08850 1859241 .. 1859271 - -22.6  -3.89346   TCGCGACTGCATAAA       CGAAGAGCCCGCCG GTG CGGCGGGCTCTGCG       GTTTGACCTGAGACG 100 49
CWR60_RS08845 1858585 .. 1858624 -  -6.3  -3.01712   CGGCTGGGCGTAATA  GTTGCTGGCCACGGCCA GGCCGG TGGCCACGGACATCAGC   AGGACGATGGGCGCG  49 61
CWR60_RS08840 1857403 .. 1857443 -  -2.4  -5.00884   ACTCGTGCGAAAAAA TAGGTAACGGACCGCGCCC GGCA GGGCGCGGGCGGTCAAA-A  CCATCGATTATAGGA  79 45
CWR60_RS08835 NONE
CWR60_RS08830 NONE
CWR60_RS08825 NONE
CWR60_RS08820 NONE
CWR60_RS08815 1851133 .. 1851143 -  -2.4  -3.01712   GCGTTTCCGGGAAGA                 CCTG TGC CTGG                 CGGCGGGCGCCGATA  41 104
CWR60_RS08805 NONE
CWR60_RS08800 NONE
CWR60_RS08795 1847757 .. 1847781 - -13.6  -4.09685   TTTTATTGCTCAAAA         CCCCGC-AGCC TCAT GGCTCGCGGGG          TTTTGTTTTTGGGGG  85 115
CWR60_RS08765 1840215 .. 1840234 -  -7.8  -3.67597   GGCGCTATTGAAGAA            CCCGGC-CG CTG CATGCCGGG            CCCGATGCGCTAGAT  63 35
CWR60_RS08750 1836890 .. 1836910 - -15.4  -2.57132   CCGGTGGGCCAGAAT            GCCGCCCG CCTGT CGGGCGGC            CAGCGCCAGCGCCTG  69 298
CWR60_RS08740 NONE
CWR60_RS08735 NONE
CWR60_RS08730 1833207 .. 1833245 - -19.7  -3.01712   TGGCGCCCGTCAACA  CTGCGGTGTGCCTGTCCC AGTG GGGACAGGCACACCTC-G   CCGCGGATGTCAGCT 100 84
CWR60_RS08715 1828867 .. 1828906 -    -2  -3.44527   CACCGATTACGACAA GGGCTGGCTCGACC-TGG TGGCTG CCGCGGGC-AGCCTGCCC  GCGCCGCTACGCGAG  47 463
        lpxO 1820991 .. 1821026 - -20.4  -2.53015   ACAGGCGCCAAGTCA    GCGGGTGCCAGTCCCC CTGC GGGGACAGGCACCCGG     GTGGTTAGAGTGCCA  95 30
CWR60_RS08675 1815433 .. 1815487 - -7.69999  -3.04322   GGTAAGTTGCGAACA GGCCAT-TTTAGCCGGCTTGCCGCCG CGCG CGGCGGCAAGCCGGCTGGTTACAGTT TCTTGATGAAAACCA  53 18
CWR60_RS08670 1815091 .. 1815106 - -11.8  -4.90266   GGCATCAATGAAAAA              CCGGCC TGCC GGCCGG               TTGCGATGAGGCGAA 100 53
CWR60_RS08665 1813078 .. 1813100 - -12.6  -3.61715   CACCGGGGTCAAGAA           CACCGAGCGC CTG GCGCGCGGCG           AAGAAGCCATCGAGA  74 122
CWR60_RS08640 1807068 .. 1807122 -  -7.2  -3.39327   CGGCTACACCCACAA GCGGCGCGCGTTGTTCATG--GAC GGGGGCGTG GTCTACATGTACTACGCGCGCGGC GGCGATTCGCTCAAT  55 480
CWR60_RS08590 NONE
CWR60_RS08585 1797004 .. 1797014 -  -3.2  -2.63631   TCAACTGCGACATGA                 TGGA CAG CCCA                 GGTTGCTCGAAGGGA  39 53
CWR60_RS08580 1795676 .. 1795709 -  -2.4  -2.64616   GTGGGATTTATATGA    GGATGGCCTGCGCCTA TTCC TAGGCGCAGG-CG-CG     GGGGGCGTATGGGAC  38 40
CWR60_RS08575 NONE
CWR60_RS08570 1794115 .. 1794133 -  -5.8  -3.05343   TGCATACGGCCAATA             GGCGGCGC AAA GCGCCGTA             CATGAATCGAAGTGC  47 142
        paaX 1783744 .. 1783769 -  -4.6  -3.62597   CGGACCGGGCAACAA         TGGCGGCGAC GTGCTG GTGGCGGCCA          CGCTGCTGCAGGCGC  54 497
CWR60_RS08500 NONE
        rsgA 1780756 .. 1780789 - -16.8  -2.52896   GCACCCCGGAAGTCA     GCAGGTGCCTGTCC TCGTGG GGACAGGCACCTGA      GGGTTTCAGTAGGGG  79 31
CWR60_RS08425 NONE
        queE 1765674 .. 1765696 -  -4.8  -3.64703   GGCGGGTGACGGAAA           TCATCGCG CATCTCC CGCGATGG           GACGGACAGTCATGG  55 35
        queD 1764969 .. 1764993 -  -7.8  -3.31792   GTACGACGCCTACAA         CATCCCGGCGC TCAA GCGCCTGG-TG          GGGCAGGGCGCCAAG  55 266
CWR60_RS08400 NONE
CWR60_RS08395 1761689 .. 1761721 -  -9.8   -4.1822   GCCGAGCCGAAGAAA     GTGCTGCCCAGGCGG TACA CCGCCTTGG-AGCGC      ACGGCGCCGGACTAC  85 177
CWR60_RS08385 NONE
CWR60_RS08380 NONE
CWR60_RS08375 1757220 .. 1757247 -  -7.6  -3.03124   GCGCAGCTGGGAAGA        GGCGCTGGGCCTG AAG CAGGCTCCGC-CC        GACGGCTCCACGCTG  53 53
        imuA NONE
CWR60_RS08360 NONE
CWR60_RS08355 1750719 .. 1750738 -  -2.1  -3.22298   GTGACCGATTACGAA            CGGCGCAT CGTCT ACGCGC-G            CATCGGCCGCGTGCT  44 464
CWR60_RS08335 1747132 .. 1747148 -    -5   -4.1552   CAGGGCGCGAAGAAA              GGGCGC ATCGG GCGCAC              CACGGTGTTGAAGCT  66 281
CWR60_RS08325 1745669 .. 1745702 - -13.1   -3.0497   AGAGCATCTGGAATA     CCGACGCGCTGCGCGC CAT GCGCGAAGCG-GTCGT     GTACGGAGTGCCGTC  66 110
CWR60_RS08315 1743189 .. 1743207 -  -4.5  -3.90112   GTTTCCGTAACCAAA            CGTGCACG GCGC CGCGC-CG             GCGTAATGCGGGACG  61 77
CWR60_RS08310 NONE
CWR60_RS08300 NONE
CWR60_RS08295 1737831 .. 1737847 -  -4.3  -3.14051   GTACCGCGAGGAAGA              GCGCGAG ATG CTCAAGC              TGTGCCGCGCCGAGG  45 399
CWR60_RS08280 1734376 .. 1734395 -  -2.8  -3.53761   CAAGGGGCGGCGAAA            GCG-CGC ATCTTGG GCGTCGC            GGGGGTGCTTGTCAA  49 37
CWR60_RS08275 1733966 .. 1733978 -  -6.2  -2.62192   CCGGACTGAAGCAAT                GCGC TAGCC GCGC                GGCTGGATCTTGCCG  46 16
CWR60_RS08230 1726384 .. 1726413 -  -4.2  -2.70932   CCGGGCGGGCAAGGA       CCGCGC-CGGC GAGGGCTGA GGCGCGCGCGG       ATCAGGACCGCAGCG  41 27
CWR60_RS08205 1719464 .. 1719482 -  -4.5   -2.7035   CCTATTGAGACATCA             CACCTAG AGCAG CTTGGTG             CCCAGCGGGACGTCG  43 10
CWR60_RS08200 1718318 .. 1718340 - -11.9  -2.50816   GCGGCAGCGACGAAG           GCGCGCCGG GACCG CGGGCGCGC           TATGGGCCGGGCTAC  58 115
CWR60_RS08175 NONE
CWR60_RS08170 1712997 .. 1713015 -    -3  -3.58396   CGTGAAATTAAAAAT             CCCACTCG TGC CCAGTGCG             TATGGCAATGCCTAC  49 56
CWR60_RS08165 1711289 .. 1711305 -  -6.5  -3.39895   CGGTGTAGCAATGAA              CCGGC TTTGTGG GCCGG              CATGTTGGTTCCGCG  55 167
CWR60_RS08160 NONE
CWR60_RS08155 NONE
CWR60_RS08140 1707036 .. 1707069 - -10.9  -2.71681   CAAGCTGCTGAAGGA     GCAC-GCCCAGCGGCG CGC CGCCGCCGTGCAGTGA     GGCGGCTTCAGCCCA  60 33
CWR60_RS08130 NONE
CWR60_RS08125 NONE
CWR60_RS08120 1703474 .. 1703509 - -14.8  -3.14132   GCGCTGGCCGACGAA   CTG-GCCGGCCCGGCG TAGGCG CGCCGG-CCGGCTCAG    CGCTGGCCGTCGTGC  76 22
CWR60_RS08080 1695884 .. 1695904 - -15.4  -3.33696   CGCCCGGCGAACGAA            CCGGCGCC CTGGT GGCGCCGG            TTTCTTTATTGCGCA  80 141
CWR60_RS08055 1690069 .. 1690089 -  -4.7  -4.02108   CGGAGCACAATGAAA            TTTGCAACG TAA CGTAACAAA            TGTTCGGCGATCCGG  61 49
CWR60_RS08045 1686444 .. 1686464 - -16.9  -4.96848   TCGCCTATATAAAAA            GCACCTGGC CGA GCCAGGTGC            AGCAGGACCAGCGGG 100 82
CWR60_RS08035 1685525 .. 1685537 -  -3.3  -3.13371   CAGGCCACTAATATA                CCGAA GCG CCCGG                CGAATAAAAATAGCG  44 76
CWR60_RS08030 1684627 .. 1684642 -  -7.5  -3.39895   GTCGGGAGGAACGAA              GCCGG AAACCG CCGGC               GCAAGCGGGGGCCCA  59 135
CWR60_RS08020 1682636 .. 1682648 -  -7.7  -2.68942   AGTGCCGTAGACAAT                CAGCA CGA TGCTG                GGCGGGATGATGGTC  51 489
CWR60_RS08010 NONE
CWR60_RS08005 NONE
CWR60_RS08000 1677907 .. 1677927 - -10.4  -2.70932   GGGCGGGGTGAATCA           GCGCGGCGC GTTG GCGC-GCGC            CACCATGGCGTCGAG  57 2
CWR60_RS07995 1676195 .. 1676213 -    -3  -2.72379   GCAAGTGGCCAAGGA             GCACAAGG TCA CCCTGCGT             ACCGCGGCCTTCATC  39 170
CWR60_RS07935 1664783 .. 1664796 -  -4.5  -3.28924   CATCTCGGTGCACAA               CCGCGC CCA GC-CGG               TGCAGGCGGCGCTGG  49 295
        smpB 1658718 .. 1658728 -  -6.8  -2.71364   CGACCGCTTCAAGCA                 GGTC AAT GACC                 AGCACGGCCACGCCG  48 353
CWR60_RS07865 1651921 .. 1651931 -  -2.4  -3.16492   GCATATCCACGAACA                 CCTG GAC CTGG                 AGGCGGTGCTGCCGC  43 291
         map 1635031 .. 1635048 -  -5.5  -2.87132   GGCGGGGGTCAGAGA             GCCGG GATTTCGA CCGGC              CGTGTCACGAAGGCC  46 1
CWR60_RS07775 NONE
CWR60_RS07770 1631619 .. 1631640 -  -7.1  -3.85165   GACGGGAAACGGAAA           GGGGCGGGC GGAT GGCCGCGCC            AGGGTTAGGCCGGCG  64 30
CWR60_RS07765 1631068 .. 1631124 - -31.9  -2.71364   CTACGCGGCCAACGA CGCCTGACCGGCGCGGCGCGGCCGGCTT GCGC AAGCCGGCCGCGC-G-GCCG-TCAGGCG TTGCGCCGCAACGCC 100 19
CWR60_RS07740 1625873 .. 1625885 -  -3.3  -4.57569   CGATTCTGTCAAAAA                TTGGC GCC GCCTA                TTGGCCGGGTAAAGG  71 117
CWR60_RS07735 NONE
        fliS 1624013 .. 1624038 -  -3.1  -4.82901   GCGGCTGGACAAAAA         GTGCCTTCCTG GTTT CAGGCCGGAAC          GGCAGGCGCAGGGTG  75 14
CWR60_RS07725 NONE
CWR60_RS07720 NONE
CWR60_RS07715 NONE
CWR60_RS07710 1621345 .. 1621394 - -11.4  -3.53444   GCATGCTGTCGCAAA TGCGCGCCGTGGTGCGCGCCG-CGC AAA GCGGCGGCGC-CACCGAGGC-CGAA CTGGCGCCTGGGCCG  69 276
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1615666 .. 1615687 -  -2.9  -2.64616   GGCTCATGGATATCA           GAAAC-CCGC CTG GCGGCGTACC           AGTCGGGCGGAGTAT  39 1
CWR60_RS07675 1614269 .. 1614286 - -10.5  -2.52464   TTCTGCCGCAATTCA             CGCCCGC GCTG GCAGGCG              AAAAACAGGGCGAAA  56 80
        fliL NONE
        fliM 1612228 .. 1612248 -  -3.1  -3.13522   AGCCGTTGACGAAGA            TGTCCATCG GTT CGCCGGCCA            GGCCGTCCAGTTCCA  44 391
        fliO NONE
CWR60_RS07650 1610961 .. 1610973 -  -3.3  -2.58544   CGCTATTGGTAGAAG                CTCTG GGC CAGCG                AGCCGAGCAGCAGGT  39 0
CWR60_RS07645 1610337 .. 1610363 - -13.1  -3.15544   CTGCAGGCCGACGAA        TTCGCCCGCGGT CTGC ACCGCGG-CGAA         CACCACCCGCATGGA  72 324
        flgA 1594356 .. 1594371 -  -5.4  -2.79004   GGATCTTCAAAATAT              TCTCCGC TGC GCGG-GA              CCGGCCCGATGGGGG  45 131
        flgM NONE
CWR60_RS07560 1593479 .. 1593495 -  -9.3  -3.01712   CGGGCGCGCGCAAGA              CGCCCGC GCG GCTGGCG              CCCGCGGCCTTGATG  57 91
CWR60_RS07475 1574217 .. 1574243 -   -13  -4.65895   CGCCGGACGCAAAAA        CGCCCGG-CGC GGTGAG GCGGCCGGGCG         TACGTACTGCCATGG 100 79
CWR60_RS07455 NONE
CWR60_RS07450 NONE
        folD NONE
CWR60_RS07440 NONE
CWR60_RS07435 1561429 .. 1561446 - -14.1    -3.965   GCGCAAAAGCAACAA             CCGCGCC CTGG GGCGCGG              TCCGGATCATTGGGT  84 32
CWR60_RS07430 1561007 .. 1561037 - -25.6  -4.07568   CGCGGCCGTCCAAAA       CAGACAGGCCGGCA AGA TGCCGGCCTGTCTG       TTTGCGCAGTGGCGG 100 44
CWR60_RS07410 1553913 .. 1553924 -  -5.8  -3.14132   CTGCGCGCCGACGAA                CGCT TCTG AGCG                 ACGTAACCGTTTCAG  49 74
CWR60_RS07400 1552504 .. 1552526 -  -6.8  -3.01924   CACCTGGCGCGAACA           GGGCGCGGCA GGC CGCCGCGCAA           CCCTGATTCTGCGTC  51 57
CWR60_RS07380 1549400 .. 1549440 -   -14  -2.90496   TGCTGCCCGAAATGA CCGACCGCTACCCGCACGA GTTC TCGGGCGGGCAGCG-CCAG  CGCATCTGCATCGCG  71 479
CWR60_RS07345 NONE
CWR60_RS07340 1540869 .. 1540881 -  -4.7  -3.85698   CTGGTCGGCGAGAAA                CTGGC CGC GCCCG                ACGCCCTGGGCAACC  60 487
CWR60_RS07325 1537851 .. 1537878 - -11.2  -3.77119   CATCAACGAATACAA        GCGGCGC-CAGGC CCC GCCCGGGCCCCGC        ATCACGCCGCGCGCG  74 501
        argH 1533358 .. 1533375 -  -9.8  -4.65895   CGCGGCATGTAAAAA             CCCGGC GCGCAG GCCGGG              TTTTTACATGGAGCG  93 49
CWR60_RS07290 1529674 .. 1529728 -  -7.7  -5.35365   AAAACATAAGAAAAA GCAATATAC-CCGGGAGCCTGTCCCC GAAC GGGGACTGGCTCCCGCTGACTTCTAC TTGCCGGCGCCCTAG 100 98
CWR60_RS07285 NONE
CWR60_RS07280 NONE
CWR60_RS07275 1526821 .. 1526839 -  -6.8  -3.28712   TCCTGCGGTTTATAA             GATGTATC TAT AATACATC             TTATGGCTTAGGCAT  54 442
CWR60_RS07265 NONE
CWR60_RS07260 NONE
CWR60_RS07255 1524680 .. 1524696 -  -2.1  -3.08046   TTCTCACTGCAAAAG              TTCGGCC AAC GGCGGAT              TTTCGCAGATTTGGG  42 60
         xth NONE
CWR60_RS07245 1522264 .. 1522275 -  -2.2  -2.90571   AAGTCCGCAACTATA                CACGG ATT CCG-G                CCGTTTTGGTAGCGG  40 82
CWR60_RS07240 1522125 .. 1522152 - -12.8  -5.63517   GCCGGAAACAAAAAA        GCCCTGGACCACG TGG CGTG-TCCAAGGC        TTTTCCGTCTGGTGT 100 42
CWR60_RS07210 1515841 .. 1515868 - -18.4  -2.50443   GGAGAGGGCAGGAAG        CGGGCGCGCGCA GGCG TGCGCGCGCCTG         GCCGGGAGGCGTCTG  87 406
CWR60_RS07205 NONE
CWR60_RS07200 1514011 .. 1514026 -  -3.2  -3.57144   GCGGTCATGTCGAAA              GGGC CTCAGTTC GCCC               GGGTCTTTTCCAGCA  49 15
CWR60_RS07195 NONE
CWR60_RS07190 1512094 .. 1512146 - -16.7  -2.52464   GTGGCGCCCAAGGGA TAGGGCGGACGCGGCGGGTCCGGCC GAT GGCCAGGCCCGCCGCGCTTTCCCCC CGGCCTACATGTGGC  77 30
CWR60_RS07155 1507159 .. 1507185 -  -8.2  -3.05463   ATTTTTTGCATGCAA         TGATTTCATTTT AGC AAAATGCAATCA         TTTTGGCAATGGCGC  55 45
CWR60_RS07150 NONE
CWR60_RS07145 1506431 .. 1506441 -    -4  -2.94872   CGTACGCAAGAATCA                 TTCT AGA AGAA                 ATGGGGCAGGGGCGT  44 54
CWR60_RS07140 1505519 .. 1505529 -  -6.8  -3.50853   CTCGCTGAACTACAA                 CGTC TTC GACG                 TGTTCGTCACCGCCA  55 392
CWR60_RS07130 1502792 .. 1502804 -  -9.1  -3.55563   ACCTGACCTTCGAAA                GCCTG CGC CAGGC                GCTCGACCTCGACGT  63 503
CWR60_RS07115 1499623 .. 1499639 - -10.1  -2.81464   CTAGCAGGGATCACA              CCGCCTG GCG CAGGCAG              GCGATGAAATGGGCC  59 4
CWR60_RS07100 1496775 .. 1496792 - -14.1  -4.18018   CCCGCCCATGCAAAA             CCCGCCC CGAG GGGCGGG              TGTGCGGGGGCGCTG  91 54
CWR60_RS07090 1494815 .. 1494871 -  -8.5  -3.14931   GCGACCCTGCACGAA GGCCGCATCACGCTGGGCGGCGCGCCC GGGCT GGGCGTTACGCCCGACCTG--GCGGCC CTGCGCGCCGCCTGC  56 68
CWR60_RS07075 NONE
CWR60_RS07070 NONE
CWR60_RS07065 1489734 .. 1489782 -   -16  -2.71712   GCGCGCCGTTGAAAT CGGGATTGGGGTCGAAGCCGGCC TGCA GTCCGGCCTCGACC-CAGTCGCG GCACAGCGGGTGGTC  75 522
CWR60_RS07050 NONE
CWR60_RS07045 NONE
CWR60_RS07040 1484148 .. 1484158 -  -2.4  -3.73106   GGAAAAGGCGAAGAA                 GGGC GGC GCCG                 GCTAGGGCATGGCGG  51 27
CWR60_RS07035 NONE
CWR60_RS07030 NONE
CWR60_RS07025 NONE
CWR60_RS07020 NONE
CWR60_RS07015 NONE
CWR60_RS07010 NONE
CWR60_RS07005 1476874 .. 1476889 -    -6  -3.28712   CGCCTCGGCGTACAA              GCCCGC GCCG GCGGCC               CCTAGCGCACGTACG  53 27
CWR60_RS06995 NONE
CWR60_RS06990 1473890 .. 1473947 - -23.6  -2.71731   CGTAGGGGGGAACGA CGCCTG-CGGC-CAGGGTGCCTGTCCCC CTGC GGGGACAGGCACCCTGCGGAGACAGGCA CCCTGCGGAGACAGG 100 107
CWR60_RS06970 1469242 .. 1469268 -  -6.5  -3.83378   CCTGAAAAGAGAGAA        GGGCGGCTA-GG CGCG CCGCAGCAGCCC         CACGCGGTCGCGGCG  62 5
CWR60_RS06965 1467906 .. 1467955 - -20.8  -3.57144   TGGTCCATGGGGAAA CT-CGG-GGGCGGGCCGGCTATGC TACC GCATCGCCGGCCCGCCGGCCGCAG CTAGCGCGACAGGCG 100 26
CWR60_RS06960 NONE
CWR60_RS06955 1466583 .. 1466612 - -12.8  -2.97171   TACGCCATGAAATCA       GGCGCCAGTCCC CATGCC GGGACAGGCACC        GGCATTCCTGCGGGG  67 47
CWR60_RS06925 1461250 .. 1461289 - -13.4  -2.60723   GGACTGGCAAGCAAT  TGGCGGGTGCCAGTCCCC CAGT GGGGACAGGCACCCGGGG   GTTAGGTTGCCGTTC  67 27
CWR60_RS06920 1460329 .. 1460362 -  -3.8  -3.17392   TACGGGTCAAGGCAA     TTTCTCCGGTGCGCC CCGGC GGCGCAACAG-GCAA     TTATCGCACTTTGCC  45 108
CWR60_RS06915 1458695 .. 1458745 - -17.5  -3.10895   CGCAATACATACAGA CCCGCCATGCGCGTCAGGCCGCGCC CGC GCCGCAGCCGG-CGCGC-TGGCTGG CGGGCCTGGACGCGG  82 485
CWR60_RS06900 1456221 .. 1456271 -  -8.2  -2.62184   CGGCGGCGGACATGA TCTGGCCCG-ACTGGCAGTAGCC GCACTG GGCCACATCCAGTTCGCGCCAGG CCTGCTGCACGGCCT  52 445
CWR60_RS06890 NONE
CWR60_RS06885 NONE
CWR60_RS06880 1451348 .. 1451394 - -17.2  -3.56821   AGGAGATCCTGGAAA GCCGGCGCCAGGCCGGCGCAG GGGACG CCGCGCTGGCC-GGCGGCGAC GGGCCTGCGCCGCTG  93 418
CWR60_RS06865 NONE
CWR60_RS06860 NONE
CWR60_RS06855 1447945 .. 1447970 -  -8.9  -3.06671   ATACCGACCGCAAGA         TCCGCGAC-GCC GTG GGCGGCCGCGGC         TAGCGCCGCCAGGCG  55 47
CWR60_RS06845 1447113 .. 1447123 -  -2.4  -2.71712   TCTCGCGGGCGAAAG                 CGGG CCC CCAG                 TATCCCGGCAAGCGG  38 75
CWR60_RS06840 NONE
CWR60_RS06835 1444477 .. 1444491 - -11.4  -2.79831   GCAACGGGCATGAGA               CCACCG CCA CGGTGG               GCCTGATGGCCGGTT  59 91
CWR60_RS06825 1442852 .. 1442909 - -32.7  -2.83403   GCGCCGCCAGGAAAG CCGCCATCGCCCGGCCCCCCGCCCGGC ATGG GCCGGGCGGGGGGCCGAAGGACGAAGG ATGTTGCTATTAAAC 100 103
CWR60_RS06820 1442051 .. 1442077 -   -10   -3.5393   ATGATCCGGCGCAAA         TGGCCGCTCAAC TGA GCAGGGCGGCCA         CCAGATCGCGGTTGG  67 6
CWR60_RS06815 1439809 .. 1439829 - -11.1  -3.57144   GCCTGGACGCGCAAA            GCATCCGCT TCG AGCGGCTGC            TGCCCGGGCCCATCG  71 514
CWR60_RS06800 1438367 .. 1438418 - -11.6  -3.14931   GGGATGGCGCAGCAA CTGGCCGGCGCCGAG-CGCATCGTCG ACGC CG-CGGTGCGGCGCG-CGCCGGCC-G ACTGAGCCGGGCGCG  66 41
CWR60_RS06790 1437454 .. 1437485 - -24.6  -2.82759   AAGATACCTATGACA      CAGGAGCCTGTCCC GGCG GGGACAGGCTCCTG       CTGAATCCTATGCCG 100 162
CWR60_RS06780 1435639 .. 1435657 - -10.2  -3.01712   TCCTGCCGCTGAACA             GCCGCGAG CGC CTGGCGGC             GATGCGCTACGACCT  59 358
CWR60_RS06770 1433654 .. 1433669 -  -4.6  -2.78384   GGGTGGCCGACTATA              TTGCGC GGCT GCGCGA               CGACCCCGAGCTGGC  43 498
CWR60_RS06755 1430879 .. 1430901 - -11.3  -2.70932   GGCGCTGTCGAATTA           CCAGCAGAC CAAGT GCCTGCTGG           TGAGCTACAGCGCCA  59 264
CWR60_RS06745 NONE
CWR60_RS06740 1425963 .. 1425979 -  -5.8  -3.17723   CGAGGGCGAACGCAA              GCGCCT GCTGG AGACGC              TGATGCAGGTCGCCA  50 439
CWR60_RS06725 1422410 .. 1422442 -  -6.9  -3.53012   CGGCCGCTCGGTAAA     GCGCGCCAGGTCGG TCATGG CC-AGCAGGCGCGC      GTAGCGTTCGCGGCG  58 376
CWR60_RS06715 1419667 .. 1419710 -   -13  -3.02144   CCACGCGCTGGAATA CGCCGGAGCCGTCGATGCGCG CGG CCAGC-TCGACCGCGCCGGCG CCGCGGCTCTGGTCG  70 226
CWR60_RS06695 1415602 .. 1415626 -  -9.9  -2.76964   CGATACGGAAGATCA          GCTGCACGCCG TGA CGGCGTTGAGC          GGCAGCGGTCCGGCC  56 338
CWR60_RS06685 NONE
CWR60_RS06680 NONE
CWR60_RS06675 1411663 .. 1411681 - -11.6  -3.01712   TTGCGGCGGCCAAGA             TCGCCCGC TAT GCGGGCGC             CTTGCGCGCCTGCCT  65 64
CWR60_RS06670 NONE
CWR60_RS06665 NONE
CWR60_RS06660 NONE
CWR60_RS06655 NONE
CWR60_RS06645 1406630 .. 1406664 - -20.7  -2.71681   CAATGTGGCCAAGGA    GGCGCGGCGCCTGCCG CGCT CGGCCGGCGCCG-GCC     TCGACGCCCTGGTGG  95 54
CWR60_RS06585 1394478 .. 1394525 -  -8.4  -2.55544   TCATCACGGAAGTGA CCATCGGCTTCAACTATGCGCTG GGC CAGGTCAC-GGTGACGCCGATGG CGCTGCTGATGACCT  51 248
CWR60_RS06570 1391037 .. 1391068 -  -7.3  -3.41988   GGTCATCGAACAATA     TGC-G-CAGGCGCGC CAGC GCGCGGCTGACCGCA      GGCTGGCTGACGTCC  56 196
CWR60_RS06510 1378392 .. 1378430 -  -3.7  -3.68988   CGCCAGCGAACACAA  GCTGAGCGCGCAGGACTGC GAG GCCG-CCTGCGCGGCC-GT  GACCTATGTGCGCGA  55 493
CWR60_RS06500 NONE
CWR60_RS06495 NONE
CWR60_RS06490 NONE
CWR60_RS06475 NONE
CWR60_RS06465 1368220 .. 1368241 -  -5.9  -3.54459   TGAACCTGCCGCAAA           TC-CTGGCGA GCC TCGCCAATGA           AGAGTTGGCGGGGTG  57 435
CWR60_RS06415 1355621 .. 1355642 -  -2.1  -3.47349   CTTCGAAAGCCATAA           CTCCGGCGCC AGC GGC-CAGGTG           ATCGGCCTGATGCCG  47 199
CWR60_RS06400 1351211 .. 1351221 -  -2.4   -2.5092   CAACAGGCGATCAAT                 CCTG AGT CGGG                 CCCGTGCCAGCGTTG  37 103
CWR60_RS06365 1346168 .. 1346208 - -11.7  -4.07618   CCTGGAACAAGGAAA CGGGTTGGCGGCGCGGCC GGCGCG GGCCGCGCGGCGC-CCCG  GTGGATCGGGATACG  82 156
CWR60_RS06360 NONE
CWR60_RS06355 1343737 .. 1343770 - -19.5   -3.1876   AAGCTGATGGAGTAA     GCGGTGCCGGTCCCC ACGC GGGGACCGGCGCCGT      CCTGGCAGTCAAGTG 100 106
CWR60_RS06330 NONE
CWR60_RS06325 1327188 .. 1327198 -  -8.2  -3.56594   CGAAAGCGGCGCAAA                 GGGC GGC GCCC                 ACGATGTTGCGGAAT  62 125
CWR60_RS06280 1316026 .. 1316053 -    -9  -3.47227   GCGGAACCAGGACAA        GCCGCGCGCCGTC GAG GTCGCC-CGCGGC        CTGCACAACCTGGGC  61 438
         tal 1310761 .. 1310807 - -12.9  -4.81249   GGCGAAACCGAAAAA CTCTAGCCGGCGGCGCGGGCAT GCCC ATGCCCGCGC-GCCGCATCGGG CTAGGCCGCGCCGTG 100 26
CWR60_RS06205 1294903 .. 1294935 - -14.2  -2.64616   CGGGGATGGATACGA     CGGGATGCCTGTCCC CGCG GGGACAGGCA-CCAG      GAGTACGGCGTGCGG  69 125
CWR60_RS06200 1293048 .. 1293086 - -12.9  -3.06492   GCACTGACCCCAATA   CGGGCGGCCGGCGCGCG CTTGT CGCCTGCCGGCCGCTGG   CCGTACAGTGGGGGG  70 448
CWR60_RS06170 1288208 .. 1288249 -  -2.1  -4.01411   TACGAAAAACTCAAA TCCGGATCGTGGATATGCGG GCG CGGCATCGCCGCG-TCCGCA CGCTTACTGTGCCTT  56 29
CWR60_RS06165 1286683 .. 1286705 -  -9.8  -3.28712   CTGGGTGGTGGACAA           CCAGCACGGC GAA ACCGTGCTCG           AACTCGACGCTACCA  63 300
CWR60_RS06075 1273353 .. 1273372 -   -15  -5.14563   GCCCGCATGAAAAAA            CCGGACGC TCGC GCGTCCGG             TTTTTTCATGGCCTC 100 44
CWR60_RS06060 1270102 .. 1270145 -  -9.4   -3.0127   CGAGGGAATTACAGA TCGCCTGAGCGAGGCAGCGG CGCT CCCCTGCCTGGGTGAGGCGC GTGTACCCGGTTTCA  57 38
CWR60_RS06055 1268685 .. 1268713 -  -7.4  -2.63348   CCGAGCAACATGAAG       GGCTCCTTCGCGCG CGC CGCG-GCAGG-GCC       GCGCGCGCGCCGTGC  50 51
CWR60_RS06050 NONE
CWR60_RS06045 NONE
CWR60_RS06040 1266529 .. 1266549 -  -3.3  -3.35046   GCAGTCTCGGAAAGA            CGGATAT TCCCAAT ATACCCG            TTGCCCGGCGGTCCG  46 59
CWR60_RS06035 1265848 .. 1265861 -  -9.5   -3.4072   TACGGGCCACGAGAA               GCCCC GGCA GGGGC                ACGATAGGCAGGTAT  63 269
CWR60_RS06030 1265482 .. 1265494 -  -4.7  -2.94144   GCCCGAGGGAAATCA                GCGGC GGT GCTGC                GGCGGACGGCTGGGC  44 10
CWR60_RS06025 1265052 .. 1265079 - -11.2  -2.75074   TGCACTGGAACATCA        GCCTGAACGACG CGCG CGTCGATCCGGC         CATCTTCATCGGGGC  59 70
CWR60_RS06005 1261423 .. 1261452 - -11.3  -2.87132   CGCGGCGCCTACATA       GGCGGCC-TGGTGG TCA CCGCCGTGGCCGCC       CGGCTGGTGGGCAAC  61 124
CWR60_RS05980 NONE
CWR60_RS05975 NONE
CWR60_RS05970 1257545 .. 1257562 -    -4  -3.60805   ACAGCGTAGCGCAAA             CCGGGC CGTCCT GCCCGC              CGGCGTGGCGCGCGG  51 44
CWR60_RS05965 1256795 .. 1256809 -  -8.6  -3.95378   TTACACCGCAAACAA               TGTTGC GGC GCAACA               TTCGTGTGGCCGGCG  70 52
CWR60_RS05960 NONE
CWR60_RS05955 NONE
CWR60_RS05950 NONE
        fabI 1251031 .. 1251042 -  -7.2  -3.33483   GATCGAAATCATGAA                GCGC CGCG GCGC                 CGAGGTGCCGATTCC  55 470
CWR60_RS05925 1246030 .. 1246068 -  -3.8  -3.32844   GTTCGCACGCGAGAA  CGGCCGG-GTGTTCG CCTATGTCAT CGAGCACGCCGGGCG   GCACCCCGACCCCGA  47 104
CWR60_RS05900 1239654 .. 1239664 -  -8.2  -3.53091   ACCCGTTTGCCGAAA                 GCCC GGT GGGC                 GCGCAGGGGCTGATG  61 336
CWR60_RS05885 NONE
        cobA 1233584 .. 1233624 -  -8.9  -3.18582   TACGGTACGCACCAA CGGCATCGCGCATCGCAC CGAACT GCGCGGCACGCG-CGCCG  AACTGGGCCTGGGCA  56 221
        queA NONE
CWR60_RS05835 1225931 .. 1225963 - -15.6  -2.73364   GGCGCAGCGCAACGA     GGGCCGCGCCGCC GGGGGGGG GGCGGC-CGGCCC      TAGTCGACCCCGCGC  75 25
        yajC 1225439 .. 1225457 - -17.4  -3.65046   GGGTGAGCGGAACAA             GGCCCCGC CAC GCGGGGCC             TTGTGTGACCTTACA  91 36
        secD 1223467 .. 1223492 -  -2.5     -3.37   TGAATCCGGAAAAAT         TCCATGTTTCGC CTT GCGTATCA-GGA         TGGCGGGCGGCCGGG  46 54
        secF 1222483 .. 1222512 - -22.2  -5.08824   GCTGCATGTAAAAAA       CCCTGCCCGGCC GTATTT GGCCGGGCAGGG        TTTTTTTACGACCGG 100 49
        miaB NONE
CWR60_RS05805 NONE
        ybeY 1218526 .. 1218561 -  -5.3  -3.31905   ATTTTGCATACAACA    GCGGCCATTGTTCCCC GATTT GGGGCGCATTGGC-GC    CAATCTGCGCGGCGC  51 43
CWR60_RS05795 1217243 .. 1217280 - -11.1  -3.16935   AAACAGCGCCAGGAA   CGCCGACAGCGCCAGCA CGCC CGCGGCCGCTAGCGGCG    CGGCCAGTCCGCCGT  64 296
CWR60_RS05780 NONE
CWR60_RS05775 1214404 .. 1214417 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CGTAACTTCTACACC  51 54
CWR60_RS05770 1214298 .. 1214319 - -14.5  -5.63517   CCCGGAAAGAAAAAA           GCCAGTTGC GTGA GCAACTGGC            TTTTCGGAATCTTTT 100 40
CWR60_RS05765 NONE
CWR60_RS05760 1211983 .. 1212014 - -17.2  -3.37879   ATCAAGCTGAACTAA      GGGCAGGGCGCGCC GCGC GGCGCGCCCTTCTC       AGGCCTGGCGCGCCA  87 24
CWR60_RS05715 1199941 .. 1199954 -  -6.7  -2.54504   ATGTGTCAAACATAG               TGTCG TAAG CGACA                GGGCCGCAATTATGC  47 115
CWR60_RS05710 NONE
CWR60_RS05705 1199700 .. 1199713 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CGTAACTTCTACACC  51 54
CWR60_RS05700 1199594 .. 1199615 - -14.5  -5.26875   CCGGGAAGGAAAAAA           GCCAGTTGC GTGA GCAACTGGC            TTTTCGGAATCTTTT 100 40
CWR60_RS05680 NONE
CWR60_RS05675 1195370 .. 1195412 - -15.7  -4.45083   GGGACAGGCACAAAA GATA-GCGGGAGCCTGTCCC CGTT GGGACAGGCTCCCGAGTATT GGAGTTACCACGGCA 100 30
CWR60_RS05660 1192165 .. 1192193 -  -6.5  -3.29144   CGAGGTGGTGGACAA        GGCCGGCGATCGC CAG GTGCTGGCCGACC        TGGACGCGGCGGCGG  52 484
        moaC NONE
CWR60_RS05640 NONE
CWR60_RS05635 NONE
        moaB NONE
CWR60_RS05625 NONE
CWR60_RS05610 1181678 .. 1181692 -    -7  -3.53224   GATGCCGGTCGGAAA               CGCCGC GCC GCCGCG               CCCGCGCAGGCCCGA  58 496
CWR60_RS05600 NONE
CWR60_RS05595 NONE
CWR60_RS05590 1176469 .. 1176484 -  -2.4  -3.55761   CATTCATGGGTGAAA              CGGCGG CAGG CGGCCA               GTGGCGGAAACCGGC  48 137
CWR60_RS05585 1174889 .. 1174913 -  -2.9  -3.53444   CCATCCTGCCGGAAA         TGCA-G-CGCC AGGTG GGCGACGTGCA         TCACTGGATGACGGC  47 454
CWR60_RS05570 1173598 .. 1173626 -    -3  -4.56597   TGCGGCGGTGAAAAA       GGCCGCGCCATTC TACG GCA-AGCGCGGCG        GCTACTTGACCAGCG  69 27
        rhtA NONE
CWR60_RS05560 1171307 .. 1171357 - -11.1  -4.30576   CCGCGAGGAGGAAAA GCG-GCTGA-CGTCCCGGCTCGAGA ACC TCGCCAGCCTGGACGATCTGCGCGC CATGCAAGGGCGCAT  85 264
        cyoA 1168507 .. 1168538 - -14.4  -3.96298   GAGCCATGAATGAAA      GCCCGCGCGCACGCC GGC GGCGTGCGCGCTA-C      AGCACCAGGTCCTGC  84 22
        cyoB NONE
        cyoC NONE
        cyoD NONE
CWR60_RS05525 1164628 .. 1164660 - -14.1  -3.53012   GCGCCCGGGCGCAAA     CGCG-GGCGGCGCG TTCAGC CGCGCCGGCGCGCG      CGCAGCTCGTGGCGC  78 7
CWR60_RS05520 1163851 .. 1163864 -  -3.7   -4.1899   GGATCGGATTGAAAA               GGGCG GCTG CGCTC                AGACCGAGCGCGTGA  65 24
        hutG NONE
CWR60_RS05490 1159960 .. 1159976 -  -5.7  -3.42503   CGGCAAGACCTACAA              CGAGGCC AAG GACCACG              GGTTCATGTACCAGC  55 128
        chrA 1157219 .. 1157240 -  -3.6  -4.11216   GGGCCACGTGGAAAA           GCCGCTGCC GGTAT GGC-GCGTC           GTCTACGACGATCCG  63 280
CWR60_RS05455 NONE
CWR60_RS05450 NONE
CWR60_RS05445 NONE
CWR60_RS05440 1150179 .. 1150198 -  -2.8  -3.23216   GCGCACCACGAGCAA            GGCATAGCC TCG GGC-ATGGC            GTCGACGACGCTGAA  46 280
CWR60_RS05430 1148449 .. 1148470 - -18.7  -3.28712   TTGGTTCGCCGACAA           CCCCCCGGG CTTG CCCGGGGGG            TTGTCGTTTGTGGGG  93 66
CWR60_RS05375 1137349 .. 1137372 -  -7.4  -3.36273   GCCGCCGAAGACGAA          GCGCGGCGC GGTTAGG GCGCC-CGC          TCGCGCGGCGTGCGG  59 13
CWR60_RS05365 1135143 .. 1135170 - -10.6  -2.78384   TCCTGGGCGAGGAGA        TCGCGCGCTGG GGCACGG CC-GCGCGCGA        GGCCGGCGTGACGCC  60 60
CWR60_RS05345 1131194 .. 1131225 - -16.6  -2.62184   GTTTTGGGCACATCA      TGTCCCCGTGGCGGC AGT GCCGGC-CGGGGACA      TGGCCGGCGTCACGC  77 420
CWR60_RS05325 1128394 .. 1128412 -  -6.6  -3.57263   ACCGCGACTTCGAAA             GCATCGGC CCG GTCGACGC             GCTGCTGGTGGACCG  56 64
CWR60_RS05310 1124991 .. 1125017 -  -6.4  -3.40403   GTTCGGCCAGCATAA         CGCGGCGGCC TCAGGCG GGCGGGCGCG         GCGCGCTGCGCCGTC  55 9
CWR60_RS05305 1124133 .. 1124168 -  -2.3  -3.90112   CGGTCTTGAACGAAA    TTGCG-GCGCGGCGGG TCTAG CGCGCGGCGCGCGCGT    AGCGGCCGGGCGTCA  56 6
CWR60_RS05300 NONE
CWR60_RS05295 NONE
CWR60_RS05290 1120654 .. 1120673 -  -4.9  -3.53012   TGCCGGTGCTCGAAA            GCCTGTC GGGGCA GACGGGC             GAGAGCGCCGCCTAC  52 453
CWR60_RS05280 NONE
CWR60_RS05275 NONE
CWR60_RS05270 1117838 .. 1117864 -  -8.6  -3.14344   CATGCCCTGCATGAA         CACCTGGGCATG ACG CAGGACCAGGCG         CGCCGGCTGGCGGCC  56 90
CWR60_RS05245 NONE
         lon 1111836 .. 1111846 -  -3.2  -4.08706   TGCCTATGATAGAAA                 TCCA GCC CGGA                 ACAAGCGTCACAGGA  59 226
CWR60_RS05235 1110306 .. 1110332 -  -3.6  -5.09225   AGGCGATGTAAAAAA         CGTGCCGC TTCATGTCCGC GCGGCGCG         AGGCCGTCACTTTTT  81 517
CWR60_RS05225 NONE
CWR60_RS05220 NONE
        ttrA 1105088 .. 1105115 - -11.9  -3.36749   GATGCTGAAGATCAA        GGCCGCCGCGC GCGGCA ACGCCGCGGCC         TACAGCGTGGGCCTC  66 66
CWR60_RS05185 1099163 .. 1099176 -  -3.7  -5.14563   CTGTGCAGCAAAAAA               GGCGC GTGC GCGAC                GGGCAATCGCGACAA  83 80
CWR60_RS05180 1098545 .. 1098560 - -11.8   -2.8511   CATGACACTAGGATA              GCGCGC GCCG GCGCGC               TACTCGCGCGCCTTG  63 25
CWR60_RS05175 NONE
CWR60_RS05170 NONE
CWR60_RS05165 NONE
CWR60_RS05160 NONE
CWR60_RS05155 1095024 .. 1095051 -   -14  -2.98881   AGATGAAACAGGACA        GCCCGGCCGGCG CGGC CGGCGGCGGGGC         GCGCGGCGCTGCCGG  72 199
CWR60_RS05150 NONE
CWR60_RS05145 1093739 .. 1093794 -  -6.4  -3.64703   CGTTCTCCACCGAAA CGTGCGCCAGC-TGCAGCGTGCGCGGC TGC GCCCCGCTGGCGGCCTGCGGGCGGTCG GTGCCGCCCTGCAGG  59 133
CWR60_RS05135 NONE
CWR60_RS05130 NONE
CWR60_RS05125 1089189 .. 1089225 -   -13  -3.14344   CATCCTGCTGACCAA   GGCGCGCGCC-CACAGCG TCG CGCTGCGCGGCCCG-GCC   GCGCAGGCGCTGTTT  68 376
CWR60_RS05110 1087308 .. 1087334 - -13.7  -3.53012   TTCGCGCTGGCGAAA         CGCCTCCAGCA GCGCG TGCTGGTGGCG         TTCATCGACCTGGAC  76 498
CWR60_RS05100 1085047 .. 1085081 - -12.1    -4.067   GGAAAGCAAGAAGAA    CCGCAGCC-GCTGAGC GGCC GCTCAGCCGGGGGCGG     GCCGGGTCGCGGACA  83 12
CWR60_RS05065 1076429 .. 1076444 - -11.8  -3.14602   GCTATGTGATGAAGA              GCGGGC TGGC GCCCGC               GCTGGTGGAGCTGGT  64 379
CWR60_RS05050 1074590 .. 1074648 -  -8.7  -3.01712   GTTCCGCTTGCAAGA CGGCCGG-CGGTCCGA-TGAGCCCGTGGC GTC GACAGGGGCTGAGTCGTTTCGGCCGGCCG CGCCGGCGTTGGCCG  55 258
CWR60_RS05035 NONE
CWR60_RS05030 1070253 .. 1070283 - -17.6  -3.55444   GCGCCACCTCGCAAA       GCCTCGCGGACG CCCGCAC CGCCCGCGAGGC       GGTCGAGACCATGCT  93 357
CWR60_RS05010 NONE
CWR60_RS05005 NONE
CWR60_RS05000 NONE
CWR60_RS04995 1064684 .. 1064706 -  -7.6  -2.64062   TATAGGAATAGGAAT           GGGCAAGCGC TCA GCGCTTGGGC           GGCGGGGCCGCCATT  50 13
CWR60_RS04990 1063374 .. 1063397 -  -4.5  -3.71848   TTCGGTGATGAACAA          CCTGCCCACC GTGCT GGTGGGC-GC          CCTGTCGATCGACGC  58 313
CWR60_RS04975 1060524 .. 1060534 -  -5.4  -3.44146   TTTGGTTACAAGTAA                 CGTT TTC AACG                 GCGTGTGCAACTTTA  53 87
CWR60_RS04970 NONE
CWR60_RS04965 NONE
CWR60_RS04960 NONE
CWR60_RS04955 NONE
CWR60_RS04950 NONE
CWR60_RS04945 NONE
CWR60_RS04940 NONE
CWR60_RS04935 1044579 .. 1044630 - -20.6  -3.34192   AAGGGCGGCAAGTAA GCGGCGCCGCGTCCCGGCCCGGCG TGCG CGCCGGCCCGGGGCGCGGTTTCAC TCCTGCGCCGGCGGC 100 22
CWR60_RS04905 NONE
CWR60_RS04895 1036008 .. 1036028 -  -8.9  -3.46602   CCGTGGACATCACAA            TGGCGCAGG CGG CCCGCGCAA            GGTTACTCGGTACAA  60 84
CWR60_RS04885 NONE
CWR60_RS04880 1033083 .. 1033105 -  -6.9  -3.35679   CGGCGTGACGCACAA           GGCCGTGGC GCGTT ACCAGGGCC           TGCTGGTCGATGCCT  52 304
CWR60_RS04870 NONE
CWR60_RS04865 1029888 .. 1029910 -  -5.4   -3.7941   CACGGTCTACAAGAA           GCTGATCCGC ATC GCCGACCTGC           ACGACGTCAGCTCGT  58 115
CWR60_RS04850 1026879 .. 1026921 -  -4.7  -3.56092   GGAGCATCGCGCAAA GCGGCGACCTG-ATGGTGGC CATG ACCATCGCGCAGGCCGCGGC GGCGCTCACGCTGCC  54 523
CWR60_RS04830 1023783 .. 1023821 -  -9.6  -3.14132   GGCCTGGCCGAGCAA GTGCG-CCGC-CGCACCGG CATG CCGGTGCGCGCGGTCGG-C  GGCATCGCCGATCCG  60 213
CWR60_RS04780 NONE
CWR60_RS04735 NONE
CWR60_RS04710 NONE
CWR60_RS04705 1001277 .. 1001316 - -10.8   -3.5241   CAGCGCCGAGAAACA GCTGACCAAGGCGCTGCC CAAGAT GGC-GCG-CTCGGCCAGC  GATCCCAAGCTGGCC  69 431
CWR60_RS04690 NONE
CWR60_RS04685 NONE
CWR60_RS04680 NONE
CWR60_RS04675  995578 ..  995595 - -14.1  -3.05844   GCCGGCAGCCGAATA             GCGCCGC AGGC GCGGCGC              GCCTAGCGCGAGCGG  72 28
CWR60_RS04660 NONE
CWR60_RS04655 NONE
CWR60_RS04650  989070 ..  989080 -  -2.4  -2.79183   GCGAGGCTCAGGATA                 CGGC CTT GGCG                 CGCTTGATGGTGGAG  38 7
CWR60_RS04645  988007 ..  988027 -  -7.5  -3.73224   GCATCTTCCAGGAAA            GCATGACCA ACG TGGCCAAGC            ACGCGCAGGCCAGCG  64 252
CWR60_RS04635 NONE
CWR60_RS04630 NONE
CWR60_RS04625  983539 ..  983557 -  -2.3  -2.69964   GTGGTAACCACAGCA             TCCCAGG TCCGG CCTGGAT             GAACAACCTATTGAG  38 50
CWR60_RS04620  982486 ..  982535 -  -5.3  -2.52464   GGGCGGGTCAATGCA TGGCCGGCGGATCGGGGGACGGGG CGA CGGCGGCCCCGGGGCCGCC-GCCG GGCCGCGCCCTAGGT  44 35
CWR60_RS04615  981337 ..  981371 -  -5.1  -6.02546   TCAAATCAAAAAAAA    CGCAGCC-GC-CATAAA TTA TTTATATGCAGGCGGCG    CGGCTTTGCGGCCAG 100 85
CWR60_RS04610  980050 ..  980060 -  -2.4  -3.45027   AGGGCGGACGAAATA                 CGTG GTT CGCG                 TTGGCGGGGCGGCCC  46 59
CWR60_RS04605 NONE
CWR60_RS04600 NONE
CWR60_RS04595  977218 ..  977237 -  -5.7  -2.75064   TGGTTGATGGAATGA            CGTCACGC AGGCG GCGTG-CG            GCTTGGCGGTTCACA  45 36
CWR60_RS04590 NONE
CWR60_RS04585 NONE
CWR60_RS04580 NONE
CWR60_RS04575  973145 ..  973187 - -10.5  -4.30844   ATTTTACGATGAAAA CATGACG-CTCC-CGTGGCGC GCG GCGCCACGGGGGGGCGGCTTG CGGCCCTGTTTTCCC  88 65
CWR60_RS04570  971883 ..  971915 -  -9.8   -3.2327   GGAACTGATCATGAA     GCGCTTCGGCCCCGCC GGC GGC-GAGCCGC-GCGC     CGCGTCCTAGGCGGC  63 32
CWR60_RS04560 NONE
CWR60_RS04555 NONE
CWR60_RS04550 NONE
CWR60_RS04545  966189 ..  966205 - -10.8  -3.05384   GCGGTGCGGATGGAA              GCGGCG GGCCG CGCCGC              TTCGGCATCCGGGGA  62 358
CWR60_RS04530 NONE
CWR60_RS04525 NONE
CWR60_RS04520  960512 ..  960555 -  -4.4   -3.0127   GCAGCCAACGATACA CAACCCCCAGTCCCGCGTCAC GCC GCGCCGCGGC-CTCAGGCTTG GGCGGGCGCCGCGGC  45 17
CWR60_RS04515  959534 ..  959549 -    -6  -2.87132   GTCGCCGGCGACACA              GGCCGC CCAC GCGGGC               ATCGATTTTGCAAAA  47 439
CWR60_RS04490  954351 ..  954382 - -11.4  -3.04144   CGTCCACGTCGAATA      CCGCCGGCGCGTAG CCCG CCTCGCACAGGCGG       CGTGCCATGTGCGCG  65 332
CWR60_RS04480  953036 ..  953054 -  -3.8  -4.72986   CATTCGTAGCAAAAA             CCCGCT GCCGCCG AGCGGA             TCGGCGGACAGTTCG  77 99
CWR60_RS04475  952201 ..  952242 -  -5.5  -3.81951   GGGCAGATGATCAAA TCGGCCGGCCTGACGCCGC AGTA GCGGCGGGGCGGCGGCGGA  TCCGCAGGGCGCGGT  60 44
CWR60_RS04460  948208 ..  948227 -  -8.6  -3.68222   TGCGAATCTGAATAA            TGCGAAGC ACGC GCTTCACA             ATATGCATATAGGCA  65 140
CWR60_RS04455  946714 ..  946728 -  -2.7  -2.69151   TGGCTTCAGATACTA               CGGGG CTCAT CGCCG               CACTCCTGGCAGGAA  40 82
CWR60_RS04450 NONE
CWR60_RS04445 NONE
CWR60_RS04440 NONE
CWR60_RS04435  942926 ..  942948 - -19.2  -2.70932   CGCTTGCCTCAACGA           TGCCAGGCCC CGA GGGCCTGGCA           TCCTCGGGGCTCAGC  93 36
CWR60_RS04430 NONE
        groL  940521 ..  940544 - -19.6  -4.86621   AGCTCCAATGAAAAA          CCCCGCCAGG CGAA CCTGGCGGGG           TTTTTTTTCGGGAAG 100 85
CWR60_RS04415 NONE
CWR60_RS04410  935764 ..  935777 -  -9.5  -3.53012   CGGCGCGCTTGGAAA               CGGCG GCGC CGCCG                CTCAGTCCAGGACGA  64 27
CWR60_RS04405 NONE
        pyrF  933539 ..  933574 - -20.4  -2.59748   CACCCTGAGAAGTCA    GCGGGTGCCAGTCCCC CTTC GGGGACAGGCACCCGG     GGGGGTTACGTTCTT  95 31
CWR60_RS04365 NONE
CWR60_RS04360 NONE
        phnD NONE
        phnC NONE
        phnE NONE
        phnE  923615 ..  923644 - -22.3  -2.78816   TCATGGCGTATGACA       GTGTGCCTGTCCC CGCG GGGACAGGCACAC        TTGCCGGTGCCAGTC 100 66
CWR60_RS04335  921593 ..  921611 -  -2.2  -3.53091   ACGCGCTGGCGCAAA             TCCGCGCC TTC GACGCCGC             CATCACCCTCACCGG  47 262
        rsmD NONE
CWR60_RS04320 NONE
CWR60_RS04315 NONE
        benE  917810 ..  917836 - -12.2  -3.57144   TGCCGGATCCTGAAA         GTGCACCCCGAC ATG GCCGAGGTGCGC         TGGCCGTCGTAGGCC  74 45
CWR60_RS04295  913995 ..  914006 -  -5.8  -3.79251   GAGCGCATCACGAAA                CGGA AGCG TCCG                 CCTGGGCGCAGGTCT  60 198
CWR60_RS04280  911250 ..  911290 -  -5.3  -3.66874   TCAACCGCATCGAAA CCGACTATGCGCG-GCGC TATCAG GCGCGCGCGCGTGCTCAG  GCTGACCGACGGCGA  57 504
CWR60_RS04240 NONE
CWR60_RS04235  898924 ..  898946 -  -2.6  -2.57344   CAGTCTTGCGATAAT          CGGCACGGC AGTGGG GGCG-GCCG           TCAGTTGAGGTTGAT  38 26
CWR60_RS04230 NONE
CWR60_RS04225  896209 ..  896223 -  -3.4  -3.96327   ACGGCCGAGGAGAAA               GACCGG GCG CAGGCC               GCCATGAATTTCTGC  60 252
CWR60_RS04215 NONE
CWR60_RS04210  892863 ..  892882 -  -5.1  -3.80461   GAATTTATCATGAAA            TTGAATG GTTAAT CATTCAA             TTTCATGGCCAGGGC  60 240
CWR60_RS04205  891674 ..  891699 -  -8.9   -4.7254   ACGCGTCATGAAAAA         GGCCGCCAAGCG CGG CGC-CGGCGGCG         CGCCGGCCGGGAGCG  86 46
CWR60_RS04140 NONE
CWR60_RS04135  875314 ..  875324 -  -8.2  -3.53012   CGCGGCCGGCGCAAA                 GGCC GCC GGCC                 GGGCCCATCGATGCG  62 50
CWR60_RS04130 NONE
CWR60_RS04125  873173 ..  873183 -  -6.8  -3.85817   ACGGTGCCGCAGAAA                 CTGG CGG CCAG                 CGCCGCCCCGCATTT  64 189
CWR60_RS04110  869557 ..  869567 -  -2.4  -4.19238   TTTTGAATCGGAAAA                 TGGC CGG GCCG                 CAATGCCCAACGGCG  62 92
        fahA  868040 ..  868067 - -21.4  -5.26875   CCCGCAAGGAAAAAA        GGTGCCTGTCCC GGTT GGGACAGGCACC         TTCGTCACCCGCGGG 100 170
CWR60_RS04075 NONE
CWR60_RS04070  858076 ..  858106 -  -3.9  -2.57132   CTGCTGCGCGACAAG       GGCGTGCGG GAATTCGTCGAGG CCGCGCGCC       TGCTGCGCGGGCGCG  40 506
CWR60_RS04015 NONE
CWR60_RS04010 NONE
CWR60_RS04005  843292 ..  843310 -  -4.4  -2.62184   CCTCGCCCGAGATCA             TGGAGCGC GTG GTGCACCA             GGTCATCCGCGAGGG  42 362
CWR60_RS03995 NONE
        mmsA  838971 ..  838990 - -11.4  -3.53012   CGTTGTTGTCGGAAA            CGCGCCGCC GGG GGC-GCGCG            AGGATCAAGCTGTGA  72 231
CWR60_RS03985  837304 ..  837324 -  -3.8  -3.10012   AATGCCAGCATGGAA            CTCCCTCG GGTTG CGCGGGCG            GGCCAGGCCCGCCCT  45 46
CWR60_RS03980 NONE
CWR60_RS03975 NONE
CWR60_RS03970 NONE
CWR60_RS03965  832231 ..  832242 -    -3  -4.60713   CAAAAGACGACAAAA                TGTT CAAA AACA                 GCGGGACAGGCCGCA  71 58
CWR60_RS03960  830611 ..  830643 - -13.3  -4.08216   CGAGCCCGCGCAAAA      CGGGCGCGCCGCC GCGAACG GGCGGCGCGCGGG      ACGGCGCTCAGCCGC  85 33
CWR60_RS03955  828342 ..  828362 -  -4.5  -3.70902   TGGTGGAGATGGAAA            TGACCTCGC AGG GCGTGGCCT            TCAACACCGGCTACC  58 162
CWR60_RS03935 NONE
CWR60_RS03890 NONE
CWR60_RS03885 NONE
CWR60_RS03880  811601 ..  811613 -  -4.8  -3.41051   GCAGTTCGACGAGAA                GTCG TTCGT CGAC                TTCAAGGGCGATGTC  52 372
CWR60_RS03855  804278 ..  804307 - -13.5   -4.2828   GCTCAGGCATGAAAA       CGCGCCGCCA-GGC CGT GCCACGGCGGCGCT       GCAGGGGCCGGCGGG  91 50
CWR60_RS03850  801969 ..  801995 - -20.8  -3.55444   GCCGCAGGCCTGAAA         CGGCCGGCCCGC GTG GCGGGCCGGCGG         CGGCGCGCTCAGCGC 100 34
CWR60_RS03830  798513 ..  798527 - -11.4  -2.91274   CTCAGCCGAACGACA               GGCTGC CTT GCAGCC               CTTCATTGACCGCTA  61 128
CWR60_RS03810  794390 ..  794418 - -11.6  -3.30771   GTACAGGGCCGAGAA        CGGGCCGCGCAG CACTT CCACGCGGCCGG        CCGAGCCGATGTCGA  68 419
CWR60_RS03800 NONE
CWR60_RS03795  791708 ..  791722 -  -7.1  -5.30616   CGAGGGAAATAAAAA               CACCG GAAGG CGGTG               GTTCATGGACTGCAT  95 110
CWR60_RS03790 NONE
CWR60_RS03785  791127 ..  791154 -   -17  -3.09831   CGTACCGCAAAAGGA        CG-CGGCCGCCCC GGG GGGGCGGCCGTCA        TGGGGCGAGACCGAC  84 59
CWR60_RS03775  789512 ..  789528 -  -5.7  -4.36914   GTCGCGCCCACAAAA              GCAGGCC CGC GCCCCGC              CCGCTTAGCGGACCT  72 30
        modA  788622 ..  788632 -  -2.4  -2.61264   CTGGTCAGCGACAAG                 GGCG GGA CTCC                 TGCAAGGGGTTACAG  38 35
        modB NONE
        modC  786427 ..  786450 -  -5.2  -3.72576   TGCGGCTTTACGAAA          TGCGGCGCAGC TAC GCCGGGCC-CA          AGCCGCAGGGCAGGG  57 394
CWR60_RS03750  781742 ..  781794 -    -3  -3.19157   CACCAAGGGCATCAA GCGCGGCCGCGACGGTTCGCTGAC GGTGT ATCTGCAGCACGACGCGCCGGCGC GCGCGCATGCGCCCA  43 161
CWR60_RS03705 NONE
CWR60_RS03700 NONE
CWR60_RS03605  746813 ..  746847 -  -8.5  -3.33696   GTGGTGTTCAAGGAA    GCGCGCGCCCTGTCGCC CTC GGCG-CAG-GCGTTCGC    CGAATTGCTCAGGCG  59 59
        benE NONE
CWR60_RS03580  739957 ..  739970 -  -3.7  -3.41051   CGACGGGCACTATAA               CTCGC ATGT GCGCG                CCATGCGCAAGCTGT  49 345
CWR60_RS03550  733719 ..  733744 -  -8.9  -3.44325   ATCGGCGACAATGAA         GGCCGGCGC GCCATCCG GCGCCGCCC          TGTCGCCGAGAGCCC  60 429
CWR60_RS03535 NONE
CWR60_RS03530 NONE
CWR60_RS03525 NONE
CWR60_RS03520 NONE
CWR60_RS03515 NONE
CWR60_RS03510  726568 ..  726590 - -10.4  -2.80816   CGGGCATCGAGCAGA           TCGCCCGCCG CCG CGGCGTGCGG           GTGAGCCTGGACGCG  56 322
CWR60_RS03420  709039 ..  709049 -  -5.4  -3.53012   TGCTTGGCGGCCAAA                 TCGT ACT ACGA                 AATTAATAAAAAAAT  54 72
CWR60_RS03415  707921 ..  707966 -   -14  -3.01924   CATCTCGCTGGAATA GCGGCGTGCCGCATGGGCCGCG CAGG CGCGGCCCATG-GACGTGC-GC TCAGCCGCCCAGGCC  72 26
CWR60_RS03400 NONE
CWR60_RS03395 NONE
CWR60_RS03390  703413 ..  703424 -  -5.8  -3.66803   GCTGAATAGTGGAAA                CCCT TAGC AGGG                 CCGCAATGCGCTCGC  57 68
CWR60_RS03385  701954 ..  701979 -  -2.5  -3.05596   GACGTTCTGATGGAA         TGGTTCGT-CGG CTG CCGCACCGACCA         TACCTTCGGCCCCGT  41 337
CWR60_RS03365 NONE
CWR60_RS03360 NONE
CWR60_RS03355  695543 ..  695566 -    -3  -2.91681   GTGGAACTGCAGATA          GCGCTTGACG GTTT CGTCGAAGGC           CTCGACCGCCTGCGC  41 85
CWR60_RS03345  693188 ..  693204 -  -4.3  -3.82084   GGCGAAGATCAACAA              GGCCATC AAC GACGCCC              TGGCCTCGCCCGACG  58 217
CWR60_RS03315  687021 ..  687067 - -16.8  -4.30978   TTGAATCCATGAAAA GACCGCAATTCCAGTCCTTAAT TCA ACTAAGGACTGATATTGTGGTC ATTTTCCATTTTTTT 100 54
CWR60_RS03310  686604 ..  686629 -  -6.7  -3.06696   CGGCTTGCCAAGATA         GCGCCTCCTAG AAGT CCAGGTCGCGC          AGCTCGGCTTTGGCC  51 7
CWR60_RS03305  685078 ..  685111 -  -4.4  -3.21276   GCGTGGTCGAGAAGA     TCGCCG-CCACCGGC TTCGT GCCGGAGGTCTCCGA     CGGCGCGGCGTTCAA  45 137
CWR60_RS03280 NONE
CWR60_RS03275 NONE
CWR60_RS03270 NONE
CWR60_RS03265 NONE
        ssuE NONE
CWR60_RS03255 NONE
CWR60_RS03250 NONE
        hutG NONE
CWR60_RS03240  672703 ..  672727 -   -20   -2.6563   TTCCTGAAGAAGTGA          GGCGGGCGGC GCGTG GCCGCCCGCC          TTGCCGGGTGCCGGT  95 41
CWR60_RS03205  665275 ..  665287 -  -9.1  -3.01791   ACGGCGTCCTGAACA                TCGCC CGC GGCGA                CCGGGTCCGGATGAA  55 445
CWR60_RS03195 NONE
CWR60_RS03190  662343 ..  662399 - -14.2  -3.53224   TAGGCGGCGCGCAAA GCG-GCCCGGGCCGCG-GGCCGTGCCGG GCG CCGGCCCGGCGTCATGGCGCGGGTTCGC ACAGCGCCATCAGGT  78 9
CWR60_RS03165  656713 ..  656768 - -15.3  -2.64472   CAGCGCGGAAATCGA GTGAGCCCCGCCCATCGCGGCGCGCC GTGCA GGAGCGCCGCGATGGG-GCAGCCCTG GGCGGCGCCGGAAGA  74 85
CWR60_RS03140  651626 ..  651641 -  -2.5  -3.31144   CGCGCAGCTGGAGAA              GGCGCG CATTC CG-GCC              GGGCGGGTCAATTCG  45 301
CWR60_RS03100  639837 ..  639848 -  -7.2  -3.14132   CCGGCGGGCCAGCAA                GGCG GGAG CGCC                 GGCGGTCGGCGCCTG  52 123
CWR60_RS03095 NONE
CWR60_RS03090  638097 ..  638121 - -15.8  -3.28712   GCGCCTGCTCGAGAA          GCTGTAGCCC TGGCC GGGCTACAGC          TGGCCGTCGAAGTCG  80 19
CWR60_RS03065  631197 ..  631207 -  -8.2  -2.71144   GACGGTCGTCAAGCA                 CGGC CCC GCCG                 AGGTGTTCCTCAACG  52 90
CWR60_RS02970 NONE
CWR60_RS02965 NONE
CWR60_RS02960 NONE
CWR60_RS02955 NONE
CWR60_RS02950 NONE
CWR60_RS02945 NONE
CWR60_RS02940 NONE
CWR60_RS02935  606277 ..  606332 - -19.7  -4.66833   GCCGAAGGCGAAAAA GCGCGC-CCG-GCGCAGCCGCGCC-GCC TGA GACTGGCGCGGGCGGGCGCGGTGCGCGC CCTGCCGCCTATGCC 100 34
CWR60_RS02920 NONE
CWR60_RS02915 NONE
CWR60_RS02910 NONE
CWR60_RS02905 NONE
CWR60_RS02900 NONE
CWR60_RS02895  599778 ..  599788 -  -2.4  -2.80816   CCTGCATTTATGACA                 CGTC CCT GTCG                 AGAAAGGAGGCGACC  40 7
CWR60_RS02890 NONE
CWR60_RS02885 NONE
CWR60_RS02875 NONE
CWR60_RS02870  595140 ..  595167 - -19.2  -4.15044   GCGGGGCGCAACAAA        GCGGGGCGTTCA GGAA CGAACGCCCCGC         TTGCCGTCGTCCGTG 100 43
CWR60_RS02855 NONE
CWR60_RS02850  590693 ..  590706 -  -3.7  -2.79796   GGCCATGGTACCAGA               CGGGC AGGG GCGCG                CCCCGCTGCGTTTGC  41 74
CWR60_RS02845  589254 ..  589264 -  -2.4  -3.78775   GTTTCGAGCAGGAAA                 CCGG CAC CCGC                 TTCCTGGCCGTGCCG  53 520
CWR60_RS02830 NONE
CWR60_RS02825 NONE
CWR60_RS02820  583741 ..  583762 - -11.5  -2.70932   CTTGCGCGGGAATGA           GGCGGCCCC GGAT AGGACCGCC            ATCCTGTCCGCGCCG  62 51
CWR60_RS02805  581125 ..  581143 -  -2.3  -2.52464   GTGTGTCGCAAGCCA            CGGCCGCC ATCA GG-GGACG             ATGGTGATGTGCAGG  37 16
CWR60_RS02800  579414 ..  579438 -  -5.6  -3.40403   CCGGGGCCATGACAA          GTACCGCGGC AACAA GCACCGGTAC          AAGCACCGTCGCCAC  53 300
CWR60_RS02780 NONE
CWR60_RS02775  574725 ..  574770 -  -3.7  -3.65351   GCATGCCGATGCAAA GGGCGGC-GGCCTCGGCCTCCA CGA TGTTGGTCATGACCAGCGGCCC CTCGTCGAGCTGCGC  54 248
CWR60_RS02765  573447 ..  573469 -  -6.9  -3.14132   GGGCTGCGCCATGAA           GCGCAGGCA GGGCG TGCCCGTGC           TCGTCATGAGCGTGA  50 157
CWR60_RS02695  556871 ..  556892 -  -6.6  -2.71364   TGACGCGCGTAACCA           TGGCTGGCG TCTGT CGCCAGC-A           TTCGACCTCAATCCG  46 412
CWR60_RS02620  544182 ..  544204 -  -4.6  -3.85698   GCCTTCCGCCAGAAA           GCCGCCGAGC AGG GCGCCGAGGC           GCGTTACATGGATCC  60 456
        trmB NONE
         pip NONE
        thiS NONE
        lysM  537396 ..  537418 - -14.9  -5.86061   GCGCAGTAAAAAAAA           CGGCCAGAC TTTGC GTCTGGCCG           AATCGATCGGGGCTA 100 106
CWR60_RS02565 NONE
CWR60_RS02560 NONE
        ampD NONE
CWR60_RS02550  532985 ..  533016 - -10.1  -3.25823   GGTGCTGGAGATCAA      CCCGGACCACGCGC TGATC GCGCG-GATCCGCG      ATGCCAGCGATGCGG  63 446
CWR60_RS02540  530929 ..  530945 -  -3.5  -4.28762   ACAATTTTAGGAAAA              TCCCCCG GTA CGGGGCT              TGTACTGCGAAATCT  65 74
CWR60_RS02530  529808 ..  529833 - -13.3  -5.02357   TAGAACCAAAGAAAA         GGCCCTTCACC CTTA GGCGAAAGGCC          CTTTCGTTTTGGAGT 100 53
CWR60_RS02495 NONE
CWR60_RS02490  521286 ..  521301 -  -2.4  -4.99035   GCATGCAGACAAAAA              CCGGGC CGAA GTCCGA               GACCGTTTTTAGCAT  79 188
CWR60_RS02485 NONE
CWR60_RS02480  519184 ..  519200 -  -5.2  -3.08133   TAGCGATTTAGTGAA              GACTAT AGGTA ATAGTC              TCACGCTGCGAGCTG  46 43
CWR60_RS02470 NONE
CWR60_RS02465  516093 ..  516108 -  -4.7  -3.03243   AGCCAGGCCGGAAGA              TGGAC TACCGC GTCCA               GGCGTGCGAGCCCTA  45 38
CWR60_RS02445 NONE
        betC NONE
CWR60_RS02435  508181 ..  508205 - -15.8  -3.27525   CGGCCGGAAATGGAA          CAGGGGTTGC TTTCG GCAACCCCTG          TCCGCGATCCGGCGC  82 191
CWR60_RS02420 NONE
CWR60_RS02415  505994 ..  506015 -  -3.7  -4.05026   GTTAAATTGAAACAA           GCCGAC-CAA GGG CTGTGTCGAC           GCTCAAGTGCCGGCG  61 28
CWR60_RS02410 NONE
CWR60_RS02405  505063 ..  505078 -    -6   -3.5774   ATCGAATCGTGGAAA              CCGCTG TTCG CCGCGG               CGCTTTGAGCGGTAA  56 63
CWR60_RS02380  497305 ..  497326 - -11.5  -3.30771   GCACATTCCGTACAA           GGGCAGCGC CGCG GCGCTGACC            GATGTCCTGAGCGGG  66 411
CWR60_RS02360  493552 ..  493579 -  -3.2  -3.53012   CGGCCCGGGCGGAAA        GCCGGCCGGCCA TCAA TGCCCAGGTGGC         GGCGTGGAGCGCCCG  49 322
CWR60_RS02280  471787 ..  471813 -  -2.1  -3.61178   CGGATGGATCGGAAA         TTCGGGTCAGC GGACG GCAGGCCGGAA         CGCCTGCAGCCAGGG  48 5
CWR60_RS02275  470559 ..  470573 -  -2.7  -4.07568   CTGCGCCGGCGAAAA               CGGCG GCGCG CGTCG               AGCATAGCGTATTGC  59 70
CWR60_RS02270  470093 ..  470117 -   -15  -4.57073   CACCCTTGTGAAAAA         CCCCGCC-GGC GCAG GCCTGGCGGGG          TTTTTCGTGGGTGGA 100 50
CWR60_RS02255  467644 ..  467665 - -11.5  -3.14132   TCTGTTCTTCACCAA           GGCCACGCC TTCC AGCGCGGCC            TAGCCGCGCTTCACG  66 36
CWR60_RS02230 NONE
CWR60_RS02225 NONE
CWR60_RS02220  456851 ..  456868 - -10.5  -3.05384   CGCGGCTGGACCGAA             GCACCGG AACA CCGGCGC              CTGTCCCGACATGGG  60 199
        thpR NONE
CWR60_RS02210 NONE
CWR60_RS02205  454146 ..  454179 - -16.1  -2.52464   GGCTTGCGTAACGGA     CGCGGTTTCCTGCCCC CTG GGGGCAGGAAA-CGTG     TCAGGCGAAGGTCTG  77 26
CWR60_RS02190  450192 ..  450222 -  -4.4  -2.66316   GCGGCGAGCAGATCA       CCGCCGTGGCGCTG GAC CTGGGCTGCGGCAG       CCCGGGCGCCTTCAC  40 151
CWR60_RS02180 NONE
CWR60_RS02175 NONE
CWR60_RS02170 NONE
CWR60_RS02165  444665 ..  444714 -  -9.8  -2.80816   GCCGTAGGCAGCATA TCGGCGACGGCGGCGCCG--CGGA TTTT CCCGCTCGGCGCGGCCGACGCGGC GCCGGTAGGCATTGC  56 396
CWR60_RS02155  443103 ..  443115 -  -2.6  -3.55444   GCGGCATGTGCGAAA                CCGA TTTTT CCGG                GTACCCGGACTGCCG  50 368
CWR60_RS02145  439586 ..  439600 -  -6.4  -4.15222   ATTGTCTGTAAGAAA               TCGCAG TAA CTGCAA               CGCTTCAGGGCGGCA  66 105
CWR60_RS02135  435902 ..  435947 -  -4.7  -3.15544   GCTCACTCGGATGAA GCCGCGGCGTGTCTCGGGCTGCC CGGC GGC-GTCCG-G-CAGGCCG-GGC GTCTCTTCCGTAGGG  47 357
CWR60_RS02130 NONE
CWR60_RS02125  433484 ..  433497 -  -3.7  -3.17075   GGCTCCGTAAGGGAA               GGCGC GGCG GCGTC                AGTGGGTCAGGTAAC  45 24
CWR60_RS02120  432669 ..  432702 - -12.4  -2.82519   CGAGCACATCAACCA    GGCGCTGCGGCGCCGC TGAG GCGGCGC-GC-GCGCG     ATGCGCGAGGAGGCG  66 61
CWR60_RS02110 NONE
CWR60_RS02105  430344 ..  430364 - -19.7  -4.11216   CTTCGATCGGGAAAA            GCCCCGGCC GCC GGCCGGGGC            GCAATGGGCGTTCAG 100 37
        catC NONE
CWR60_RS02095 NONE
        pcaD NONE
CWR60_RS02085  427501 ..  427513 -  -4.7  -3.73068   GGCCGAATGCAACAA                GTCGG CAA CCGGC                AAGACCGGCGACGAG  58 363
CWR60_RS02075 NONE
CWR60_RS02070  425656 ..  425691 -  -9.1  -3.03124   GGCCATGCGTGAACA   TGC--CCAGGCGCGC GCGCAATG GCGCGCCTGGATGCA    GGACTACGATGCGTT  55 336
CWR60_RS02055  422202 ..  422225 -    -4  -3.68359   GTGCCAAAACCATAA          CTACAGGTTAA GTA TTAACCC-TAG          TCGGCCTTGGAAAAC  54 22
CWR60_RS02050 NONE
CWR60_RS02045 NONE
CWR60_RS02040 NONE
CWR60_RS02035  418556 ..  418594 -  -6.1  -3.39288   CAGGCCGGAACAATA  CCCATGGTCCAGCTATC GCGCTCG GAT-GCTGGGCCA-GGG  CGGCGTGGATGCGCC  52 184
CWR60_RS02025 NONE
CWR60_RS02020  415404 ..  415417 -  -2.4  -4.10144   TGAAGACAACAAGAA               CGAT CCGCGC ATCG                CGCGCTTTATCAAGG  58 151
CWR60_RS02010  412941 ..  412975 -   -10  -3.41229   ACAGTTCGAGCAGAA    CCTGGCGCGC-TCGC TCAGCG GCGAGGCGCAGCAGG     GCCCGGTGCAACCGG  65 518
CWR60_RS01950  401954 ..  401975 - -11.6  -4.61873   GCGCACAAATGAAAA           TGCCCAGC GCAAGG GCTGGGCA            TCGAATTCTTGGTGG 100 35
CWR60_RS01925 NONE
CWR60_RS01920  396054 ..  396064 -  -6.8   -3.9461   TGCGGTCAACAACAA                 CGTC TTC GACG                 TCTACGCGGTTCTGG  63 384
CWR60_RS01845 NONE
CWR60_RS01840 NONE
CWR60_RS01835  380568 ..  380597 -  -7.8  -3.62046   CGATCGCGGCAATAA       CGGCGCCAAGCCG GACAT CGGCTCGTCGC-G       CCCCTTGCTGCATAC  60 427
CWR60_RS01825 NONE
CWR60_RS01820  377028 ..  377079 -  -9.6  -3.33696   GGGGGGCGGAACGAA CTGACCCCGCAGGAGGGGCCTGTCCC GGCG GGGACAGGCC-C-CCTG-GAG-TCTG CGTGCGCCAGTCCCC  61 103
CWR60_RS01815  375886 ..  375937 -  -6.5  -4.07568   CTTGCTTCTTGAAAA TGGTTCAGCCGGGCGCCG-CGCCGGC CAG GCCGGCGGCGGCGCTCAA-T-ACCCT TCTACCGCGACGTGG  66 16
CWR60_RS01810 NONE
CWR60_RS01805 NONE
CWR60_RS01800  373181 ..  373196 -  -2.4  -3.64822   ATCCGCTGATCGAAA              GCGCCG AAGG CTACGC               GCATCTGCCGGCCGT  50 483
CWR60_RS01785  370548 ..  370569 - -10.1  -3.01712   GCGCGGCCGGCAATA           CGCCCGG CTCGACGT CCGGGCG            CTGCCGATTGTAGAG  60 60
CWR60_RS01780  369407 ..  369426 -  -4.4  -3.45571   GTGGGGAAATATCAA            TGTATACA TGAC TATATACA             TCAATGGATATCGGC  51 162
CWR60_RS01770 NONE
CWR60_RS01765 NONE
CWR60_RS01760 NONE
CWR60_RS01755 NONE
CWR60_RS01750 NONE
CWR60_RS01745 NONE
CWR60_RS01740  360133 ..  360173 -  -3.6  -3.65046   TTGTCATTGTAATAA  CTCCTGGCCGGGCGCCGG ACGGG CCGGCGGCGGGCGCCGCG  CGGCCCGCCGCTCGA  54 44
CWR60_RS01735 NONE
CWR60_RS01725  357705 ..  357726 -  -5.7  -3.30124   CTTCACGCTGTACAA           CGCGTCCGG CATG CCGGACCTG            GTGGCCATTATCGAG  52 264
CWR60_RS01715 NONE
CWR60_RS01710  354640 ..  354651 -  -5.8  -3.01712   GTGTTGGCTTGAACA                TGCC TCAG GGCA                 TGTAGAAGCCGCCGT  47 18
CWR60_RS01705 NONE
CWR60_RS01700  352599 ..  352629 - -12.4  -2.70932   GGTGCTGGCCAAGCA       GGCCGCGCAGGCGC GCG GCGCCTTCGAGGCG       GTGATGGTGGACGCG  63 384
CWR60_RS01640  336648 ..  336667 -  -4.3  -2.71144   TACGGCCGCGAAGGA            TCGCGCCA TGGCC TGGC-CGA            GTACATGCAGATCAA  40 84
CWR60_RS01610  327567 ..  327592 -  -8.9  -3.70902   GGGCGCATAGCGAAA         GCCGATACCGC AAAC GTGGTGTCGGC          TTTTTTGCGTTCGCG  65 63
        rplU NONE
CWR60_RS01585  324055 ..  324076 - -17.3  -5.45802   GCCTGAAAACAAAAA           GCCCTGCCG CGTG CGGCAGGGC            TCGCCGTTCCGGGGA 100 53
        obgE NONE
CWR60_RS01575  321555 ..  321577 -  -4.1  -3.06696   GCGGTCGGGAATACA           GGACAAATC GGAGG GGCTTGTCC           GGCATGTTGGTTGGT  44 62
CWR60_RS01565 NONE
CWR60_RS01560  319547 ..  319570 - -10.2  -4.41348   TCTCGCTGAAATAAA          GGCGCGCGCCC GGT GGG-GCGCGGC          AGGGGCATTATTCCA  88 56
CWR60_RS01555  317245 ..  317264 -  -4.2  -3.71848   GCTGGTCAGCAAGAA            GATCCAGG CCCG CGTGGACC             TGATGCGCGGGGCGC  55 94
        thiC  312934 ..  312960 -  -3.4  -3.72576   GCCTGCGCGAGGAAA         TCTCGGAGGCGC AGC GCGCCGACGGGC         CGCATCTCAAGCACG  55 507
CWR60_RS01505 NONE
        grxC NONE
        secB NONE
CWR60_RS01490 NONE
CWR60_RS01485  302622 ..  302664 - -17.7  -2.79183   TGCAGGTGCACGACA CGCTGCCGCAGGCGCTGGCGG CCA CCGGC-GCGGCTGCGGC-GCG CGTCTTCGCGCTGAC  78 288
CWR60_RS01470  300458 ..  300470 -  -9.1  -4.09685   GTCCATGGCGCAAAA                CTGGC GCG GCCAG                GGCGTCCAGGACACC  72 173
CWR60_RS01415 NONE
CWR60_RS01410 NONE
CWR60_RS01405 NONE
CWR60_RS01400  284515 ..  284568 - -14.6  -4.32857   GCTGGCAAAGACAAA GTGACACACCCAGGTGCCTGTCCCC GCACG GGGGACAGGCACCTGC-CGAATCCC GGGTGCCTGTCCTTC 100 90
CWR60_RS01365  278123 ..  278150 -  -6.2  -3.17714   CGAAATCTTCATGAA        GCTGCTGTCGAC GCTG GTCGACGCCAAC         AATCAGTACAGCCGC  50 69
CWR60_RS01325  268686 ..  268698 -  -5.5  -3.61398   CCGGTTTCCCAAGAA                CGCCA ACC TGACG                GGCACGATCGCGCTG  54 299
CWR60_RS01315  267129 ..  267162 - -14.5   -2.7035   CCTATTGAGACATCA     CACCTAGCGCCCGGC CTGG ACCGGGCGCCGGATG      CGGTTTCAGGCCTGC  72 31
CWR60_RS01310  265992 ..  266010 - -10.3  -3.07222   AGGAGCACCTGAAGA             TCCTCGC GGCCT GCGAGGA             AGGCAATGCCGCGCG  59 110
CWR60_RS01290 NONE
        rimO  260603 ..  260622 - -11.4  -3.28712   TTGGCTGCGCTACAA            GCGCCACG CCTT CATGGCGC             GCGGCTTGAGCGCCG  66 434
CWR60_RS01275 NONE
CWR60_RS01270 NONE
CWR60_RS01265 NONE
CWR60_RS01260  257661 ..  257681 - -11.8  -3.36492   GCTGGAATTGCAGAA            GGCCGGCG GCAAG CGCCAGCC            GGTGGACGTCTTCGT  66 82
CWR60_RS01240 NONE
        dprA NONE
CWR60_RS01230  251856 ..  251884 -  -4.3  -3.20723   TGTTCATGAATGGAA        CGGGCGATGCGGC GAG GCCGCGTAGCATG        AGGAGGGCGTATGGG  47 131
CWR60_RS01225  251123 ..  251159 -  -2.2  -4.28254   GCTCAAGAGCGAAAA   CCCCAACGT-GCGCCGCA TCC TG-GGCGTGACGCCGGGC   GCCGGCGCCAACCTG  65 237
CWR60_RS01210 NONE
CWR60_RS01205  246597 ..  246622 - -10.3  -3.35679   CGTCGTCACCGAGAA         CGGCGTGGCGC AGAT GCGCCAGGTCG          ACGGCGTGGCCGTGC  63 290
CWR60_RS01190  244532 ..  244576 -  -5.4  -3.54424   CTCGATGGCCTGAAA GGCTACGGCGCGGACACCGA TACCG CCGGTGCCCTGGACGACGCC GGCTGAGCCGGCCTA  54 38
CWR60_RS01180 NONE
CWR60_RS01175 NONE
CWR60_RS01170 NONE
CWR60_RS01165  238831 ..  238845 -  -8.5  -3.01712   TGCCTTGTCTGAACA               CCGGG GTTGG CCCGG               TCTTTAGCCGGGTAT  55 93
CWR60_RS01155  236500 ..  236513 -  -2.3  -2.61004   GTACGTCGAAAAACT               CGGAC ATGG GTGCG                CACCCTCTCGTGTGC  38 87
CWR60_RS01150  235028 ..  235040 -  -9.1  -3.06796   GGCGAGCCCATGCAA                TGGCC GGC GGCCA                AGGGCATCGACCGGC  57 226
CWR60_RS01130  233060 ..  233073 -  -5.2  -3.05384   CCCGCCGTTACGCAA               GCCG GCGGCG CGGC                TACAGCGCGTCCAGG  47 25
         pap NONE
CWR60_RS01120  231062 ..  231075 -  -4.5  -2.52464   CGCGTGCTCAAGCCA               GCACC TTGC GGTAC                TGCAGGAAGCCCGAG  42 4
CWR60_RS01115 NONE
        nhaA  227539 ..  227554 -  -4.6  -3.05343   GGCAGACCGGCAACA              TGGCGC GCCT GCGCGA               GTGCTGCAAGGGGTT  46 199
CWR60_RS01085  225837 ..  225852 -  -3.2  -2.90194   AGGGGCGCAACGAGA              CCG-GGC CGC GCCACGA              CCTGACGGACTGGGT  42 167
CWR60_RS01075  224244 ..  224277 -  -8.7  -2.52543   ACCCCGTGCAACGCA     GGTAGCGCCTGTCCC CGCT GGGACAGGCGCCGTT      CAATCCCGCGCCCCG  51 25
CWR60_RS01070 NONE
CWR60_RS01065  222454 ..  222475 -  -6.5  -2.87132   TCCTTGCCGCATATA           GCGGCGCAT ATGC ATGCGCCAG            GCCGAACAAGGGAAA  48 257
CWR60_RS01060  220733 ..  220783 -  -5.1  -2.50034   CATGAAGGGAAAACG CCCGGTGGAGCGCAGCGGCGCGGG CAGG CCCGCGCCGC-ATGGTCCGGTTGG TTCAGGCCTTAGCCG  44 34
CWR60_RS01055  219453 ..  219470 -  -9.1  -3.14132   TCCGGCGCGCATCAA             GCC-GGCG CTG CGCCAGGC             GCGCTTGCAGGCGCT  56 68
CWR60_RS01040  215555 ..  215579 -  -8.4   -4.1899   CGACCCTAGGGAAAA          CCCCGGGAGG ACGGG CCGCCCGGGT          TGGCGTGTTCAGCGC  76 34
CWR60_RS01035 NONE
CWR60_RS01030  212877 ..  212892 - -11.8   -5.1675   GCAGGCATGAAAAAA              GGCGGC CGCG GCCGCC               TTTTCCGGATCGACA 100 50
CWR60_RS01025  211740 ..  211780 - -10.4  -4.07885   GACCCTGCTGGAAAA CGGCGCGCCCG-GCGTGCA TTTC TACACGCTCAACCACGCCG  AAGCCACGCTCGGCA  75 127
CWR60_RS00990 NONE
CWR60_RS00985  204165 ..  204183 -  -2.2  -3.57263   ATTCCGACGCGGAAA             GCCCCTGG ACG CCCGGGAT             GGCCGCCGTTTCAGT  48 36
CWR60_RS00980 NONE
CWR60_RS00975 NONE
        xerC  201080 ..  201115 -  -8.9  -2.80816   GCCTCATCGAGTACA    CGCAGCGCGACGCCGA GTTCA CCGGCGTCGAGG-GCG    AAATCCGGCACCGCT  52 436
CWR60_RS00935  194290 ..  194316 -  -3.8  -3.93556   ATCGATGCAATGAAA         GAAGATGG GGGCGGGATTT CCATCTTC         AAGAGGGGGCGGAGC  59 76
CWR60_RS00930  192861 ..  192877 - -10.1  -2.57795   TCCACTATGAATCGA              TCCGGGC GCG GCCCGAA              TATTCGCGCCTGGCT  57 129
        dksA  192299 ..  192322 - -13.2  -5.07652   GGTCCGAAAACAAAA          GGGCTATGCC GTGG AGCATAGCCC           TGGTAATGCGTTCGG 100 76
        hslV NONE
        hslU  190294 ..  190323 - -22.1  -3.81027   TCCAAGTAAGGGAAA       GGCCGCGGCGCCC AGGC GGGCGCCGCGGCG        GCCGCGCTACAGCAC 100 32
CWR60_RS00905 NONE
        rfbB NONE
        rfbD NONE
        rfbC  186392 ..  186427 - -16.1  -3.14878   GGCGTCAACTGAACA    CGCGCGGGCCGCTAC GCATAG GTATCGGCCCGCGCC     AGCGCCACGCCCTGG  81 1
CWR60_RS00835  176791 ..  176813 -  -7.6  -3.53811   CGCATCCGGGTCAAA           CCAGCCGACT TTG AGGCGGCTGT           TGCCGGAGTCGATGA  60 47
CWR60_RS00825  175753 ..  175763 -    -4  -2.82327   GTGCGATAGGGAAAT                 TTCT CGA AGAA                 TTATAGACAGGGGCT  43 117
CWR60_RS00820  174621 ..  174654 -  -9.3  -2.75481   GTTCAATTTCAAGGA     TGCCGCCCGGGACGC CATT GCGGCGGGGGCGGCG      CTGCGTGCGCCCGAC  52 219
CWR60_RS00805 NONE
CWR60_RS00800 NONE
CWR60_RS00795 NONE
CWR60_RS00790 NONE
CWR60_RS00785  167279 ..  167294 -  -7.5  -2.62515   AATTCTCGCAGATTA              GCGCG AGGCTG CGCGC               CGTGGCGTGACAGAT  50 7
CWR60_RS00780 NONE
CWR60_RS00775  165310 ..  165349 - -13.4  -3.54424   TCGGATGGCGGGAAA  GCCGCGGCATTGGTGCGC AAAG GCGCGACACTGCCGGGGC   GCGCCATTGAGTGCG  77 112
CWR60_RS00770 NONE
CWR60_RS00765  163298 ..  163319 -  -7.9  -4.62302   GAAGAGCCGGAAAAA           CCCAGTGCG ACGG CGCACAAGG            CCAGTGGCGTGGATA  81 73
CWR60_RS00760 NONE
CWR60_RS00755  159936 ..  159956 -  -6.7  -3.63627   GGGGCATACCTGAAA            TGCTGCGCC ATG GGGGCGGCA            TGACGTTGCCCGAGC  57 216
        asnB  155829 ..  155843 - -11.4  -2.92792   ATCGATGTGAAAGTA               CCGACC GCC GGTCGG               CGCGCCCGTCGCTGT  63 56
CWR60_RS00735 NONE
CWR60_RS00730  153110 ..  153134 -  -4.1  -3.94188   ACGTACGGCAAATAA          GACGGCGGACT GGA AGTTCCCCGGC          CCGGCCTGTTCCCGA  59 363
CWR60_RS00630  127807 ..  127836 - -11.3  -2.62263   ACGTCGCCGACACCA       GCGCCATCCAGCG CACC CGCTGGCCGGCGT        CGGGAAACAGGTCCG  59 509
CWR60_RS00620  125847 ..  125874 -  -6.1  -3.15544   TGGGACCTGCAGGAA        CGCCTGGAGCG CGCCAT CGCCCTGGGCG         GCCAGTTCATCCGGC  50 148
CWR60_RS00580 NONE
CWR60_RS00575  115161 ..  115174 -  -8.1  -3.94877   ACTGGTCAACAACAA               GCACC CGCT GGTGC                CGATGTCGACGTTGC  67 142
CWR60_RS00535   99824 ..   99843 - -16.4  -5.04733   CAAGCATAAACAAAA            CGGCCGGC TTGC GCCGGCCG             TCCCGGGACGGTGAC 100 46
CWR60_RS00530   98761 ..   98775 -  -2.8  -3.01924   GATTTGCCCGCAAGA               TCCC ACCAGTG GGGA               ATTGGGAACGCGTCT  42 101
CWR60_RS00525   98129 ..   98161 - -18.5  -5.83822   CAGAGGCAAAAAAAA     CGGCGCCCGTCCCT CTGTAC AGGG-CGGGCGCCG      GCACTTACGGCTGCG 100 63
CWR60_RS00520   96410 ..   96438 -  -4.6  -3.53012   GCGCGCTGCTCGAAA       GCGAATCAGCC CGGCTGGC GGC-GATCCGC        GGCACGGACGCCGAC  52 433
CWR60_RS00510   93632 ..   93655 -   -21  -2.70932   GCGGCCCGGCAAGCA          GGCGCCCGCC GGCA GGCGGGCGCC           TGGCGGCGTCAGCGC 100 34
CWR60_RS00505 NONE
CWR60_RS00500   92651 ..   92682 -  -7.8  -3.66908   GGGCTGGAAAAGTAA      CCTGCCGGGGGGGC AGAT ACCGTCCTGGCAGG       CTAGCGTTCATGGCG  63 130
CWR60_RS00450   81365 ..   81396 -  -8.6  -3.21099   GCGCGGCACGACGAA      GCCGCCGCCACGCTG GGC CAG-GCGCCGGGGGC      GCAGCTGTATCGCCT  56 401
CWR60_RS00420   74815 ..   74830 - -10.4  -4.13767   CGCTGGATGCGAAAA              CCCTGC CCAG GCAGGG               TTTTTTTTGGTTCAT  78 37
        uvrA   69415 ..   69439 -  -9.9  -3.39844   TGCACACGCGAAATA          TCGGCCTGCGC CGC GCTCAGGTCGA          TGCCCGGCAGCCGGG  65 450
CWR60_RS00380   63222 ..   63247 -  -2.4  -3.70149   TCGACAGTATCGAAA         GCCAGGCGGAC GATTG GGCCGCA-GGC         CTGGATGTCGATATC  53 331
CWR60_RS00370 NONE
        lysA   61612 ..   61641 - -22.3  -3.53012   GCGCCGCCCTTCAAA       GACAATGCCCCGC AGAT GCGGGGCATTGTC        TTTGGCAGGCCTTGC 100 48
CWR60_RS00345 NONE
        hemB NONE
CWR60_RS00320   51455 ..   51490 - -13.2  -3.55444   CCGGCAGCGCGGAAA    GCGGCAAGGGCGGGTC TTCG GACCCGCCCTTGCTTT     TTGCGGCGCGCGCAG  77 101
CWR60_RS00220   40058 ..   40078 - -15.4  -4.72272   GCCGGCCATGAAAAA            CCCCGCCG GATCG CGGCGGGG            TTGGCCTGAGCCCGG 100 50
CWR60_RS00135 NONE
CWR60_RS00130   27062 ..   27081 -  -6.4  -2.70932   GCTGTCGGCCAACGA            GC-GGCAGA TCG TCCGCCTGC            TGCTGGGCGCGGCCG  46 255
CWR60_RS00120 NONE
CWR60_RS00115   24044 ..   24068 -  -7.7  -2.97021   TCGGCAAAGATGATA          TCCAGGCCCAC CGC GCGGGCCTCGC          CCAGCTTGTCCAGCA  53 310
CWR60_RS00100   20121 ..   20144 - -16.8  -5.50499   CGACAGCCAAAAAAA          GGCCGCTGAT GCAT ATCAGCGGCC           TTTTGCTTGACGCTG 100 53
