BN117_0001 SM01228 BN117_0001 BN117_0005 SM00470 ParB-like nuclease domain BN117_0006 SM00870 BN117_0006 BN117_0009 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BN117_0009 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BN117_0010 SM00649 Ribosomal protein L11/L12 BN117_0015 SM00663 RNA polymerase I subunit A N-terminus BN117_0020 SM00448 cheY-homologous receiver domain BN117_0020 SM00862 Transcriptional regulatory protein, C terminal BN117_0021 SM00448 cheY-homologous receiver domain BN117_0021 SM00862 Transcriptional regulatory protein, C terminal BN117_0026 SM00838 Elongation factor G C-terminus BN117_0026 SM00889 Elongation factor G, domain IV BN117_0028 SM01403 BN117_0028 BN117_0032 SM01382 BN117_0032 BN117_0032 SM01383 BN117_0032 BN117_0035 SM00322 K homology RNA-binding domain BN117_0041 SM01374 BN117_0041 BN117_0056 SM00363 S4 RNA-binding domain BN117_0056 SM01390 BN117_0056 BN117_0057 SM00662 RNA polymerases D BN117_0063 SM01004 Delta-aminolevulinic acid dehydratase BN117_0069 SM01219 BN117_0069 BN117_0073 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BN117_0082 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0082 SM00866 BN117_0082 BN117_0091 SM00382 ATPases associated with a variety of cellular activities BN117_0096 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0096 SM00895 BN117_0096 BN117_0101 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BN117_0102 SM01130 BN117_0102 BN117_0112 SM00834 Putative regulatory protein BN117_0116 SM00155 Phospholipase D. Active site motifs. BN117_0130 SM00382 ATPases associated with a variety of cellular activities BN117_0131 SM00382 ATPases associated with a variety of cellular activities BN117_0161 SM00382 ATPases associated with a variety of cellular activities BN117_0165 SM00936 Penicillin-binding protein 5, C-terminal domain BN117_0169 SM00729 Elongator protein 3, MiaB family, Radical SAM BN117_0175 SM00382 ATPases associated with a variety of cellular activities BN117_0175 SM01086 C-terminal, D2-small domain, of ClpB protein BN117_0178 SM00833 Cobalamin synthesis protein cobW C-terminal domain BN117_0180 SM00382 ATPases associated with a variety of cellular activities BN117_0194 SM00996 S-adenosyl-L-homocysteine hydrolase BN117_0194 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BN117_0204 SM00487 DEAD-like helicases superfamily BN117_0204 SM00490 helicase superfamily c-terminal domain BN117_0205 SM00986 Uracil DNA glycosylase superfamily BN117_0205 SM00987 UreE urease accessory protein, C-terminal domain BN117_0209 SM00342 helix_turn_helix, arabinose operon control protein BN117_0218 SM00849 Metallo-beta-lactamase superfamily BN117_0219 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BN117_0223 SM00382 ATPases associated with a variety of cellular activities BN117_0227 SM00382 ATPases associated with a variety of cellular activities BN117_0229 SM00100 Cyclic nucleotide-monophosphate binding domain BN117_0236 SM00062 Bacterial periplasmic substrate-binding proteins BN117_0240 SM00344 helix_turn_helix ASNC type BN117_0249 SM00729 Elongator protein 3, MiaB family, Radical SAM BN117_0253 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0253 SM00895 BN117_0253 BN117_0259 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_0259 SM00387 Histidine kinase-like ATPases BN117_0259 SM00388 His Kinase A (phosphoacceptor) domain BN117_0260 SM00448 cheY-homologous receiver domain BN117_0263 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_0280 SM00382 ATPases associated with a variety of cellular activities BN117_0292 SM00450 Rhodanese Homology Domain BN117_0293 SM00855 Phosphoglycerate mutase family BN117_0295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BN117_0295 SM00245 tail specific protease BN117_0297 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0297 SM00895 BN117_0297 BN117_0303 SM00530 Helix-turn-helix XRE-family like proteins BN117_0304 SM00862 Transcriptional regulatory protein, C terminal BN117_0305 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BN117_0319 SM00382 ATPases associated with a variety of cellular activities BN117_0323 SM00062 Bacterial periplasmic substrate-binding proteins BN117_0326 SM00382 ATPases associated with a variety of cellular activities BN117_0332 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0332 SM00895 BN117_0332 BN117_0334 SM00869 Autotransporter beta-domain BN117_0335 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0335 SM00895 BN117_0335 BN117_0336 SM00829 Enoylreductase BN117_0340 SM00382 ATPases associated with a variety of cellular activities BN117_0348 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0348 SM00866 BN117_0348 BN117_0354 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0355 SM00882 Coenzyme A transferase BN117_0356 SM00882 Coenzyme A transferase BN117_0363 SM00382 ATPases associated with a variety of cellular activities BN117_0364 SM00382 ATPases associated with a variety of cellular activities BN117_0366 SM00886 Stress responsive A/B Barrel Domain BN117_0373 SM00448 cheY-homologous receiver domain BN117_0373 SM00862 Transcriptional regulatory protein, C terminal BN117_0379 SM00937 BN117_0379 BN117_0385 SM01092 CO dehydrogenase flavoprotein C-terminal domain BN117_0387 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BN117_0393 SM01321 BN117_0393 BN117_0394 SM00382 ATPases associated with a variety of cellular activities BN117_0395 SM00382 ATPases associated with a variety of cellular activities BN117_0401 SM00947 Carbonic anhydrase BN117_0408 SM00882 Coenzyme A transferase BN117_0409 SM00882 Coenzyme A transferase BN117_0410 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0414 SM00869 Autotransporter beta-domain BN117_0425 SM00342 helix_turn_helix, arabinose operon control protein BN117_0427 SM00858 BN117_0427 BN117_0439 SM00244 prohibitin homologues BN117_0441 SM01119 BN117_0441 BN117_0445 SM00869 Autotransporter beta-domain BN117_0449 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0453 SM00829 Enoylreductase BN117_0463 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0463 SM00895 BN117_0463 BN117_0465 SM00357 Cold shock protein domain BN117_0472 SM00833 Cobalamin synthesis protein cobW C-terminal domain BN117_0492 SM00387 Histidine kinase-like ATPases BN117_0494 SM00644 BN117_0494 BN117_0497 SM00382 ATPases associated with a variety of cellular activities BN117_0497 SM00962 SRP54-type protein, GTPase domain BN117_0497 SM00963 SRP54-type protein, helical bundle domain BN117_0498 SM00257 Lysin motif BN117_0508 SM00530 Helix-turn-helix XRE-family like proteins BN117_0529 SM00382 ATPases associated with a variety of cellular activities BN117_0546 SM00487 DEAD-like helicases superfamily BN117_0555 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BN117_0555 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BN117_0555 SM00493 BN117_0555 BN117_0568 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0569 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0570 SM00878 Biotin carboxylase C-terminal domain BN117_0573 SM00822 BN117_0573 BN117_0576 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0580 SM00893 Electron transfer flavoprotein domain BN117_0581 SM00893 Electron transfer flavoprotein domain BN117_0604 SM00382 ATPases associated with a variety of cellular activities BN117_0607 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0608 SM00100 Cyclic nucleotide-monophosphate binding domain BN117_0608 SM00419 helix_turn_helix, cAMP Regulatory protein BN117_0613 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0625 SM00881 CoA binding domain BN117_0634 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0634 SM00895 BN117_0634 BN117_0640 SM00833 Cobalamin synthesis protein cobW C-terminal domain BN117_0641 SM00320 WD40 repeats BN117_0643 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0644 SM01130 BN117_0644 BN117_0646 SM00062 Bacterial periplasmic substrate-binding proteins BN117_0648 SM00382 ATPases associated with a variety of cellular activities BN117_0650 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0660 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0660 SM00895 BN117_0660 BN117_0669 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BN117_0671 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0683 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0704 SM00530 Helix-turn-helix XRE-family like proteins BN117_0716 SM00382 ATPases associated with a variety of cellular activities BN117_0717 SM00382 ATPases associated with a variety of cellular activities BN117_0719 SM00822 BN117_0719 BN117_0728 SM00342 helix_turn_helix, arabinose operon control protein BN117_0735 SM00382 ATPases associated with a variety of cellular activities BN117_0737 SM00965 Secretin and TonB N terminus short domain BN117_0744 SM00382 ATPases associated with a variety of cellular activities BN117_0756 SM00382 ATPases associated with a variety of cellular activities BN117_0756 SM01086 C-terminal, D2-small domain, of ClpB protein BN117_0767 SM00869 Autotransporter beta-domain BN117_0768 SM00155 Phospholipase D. Active site motifs. BN117_0769 SM00382 ATPases associated with a variety of cellular activities BN117_0779 SM00344 helix_turn_helix ASNC type BN117_0779 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0782 SM00862 Transcriptional regulatory protein, C terminal BN117_0785 SM00450 Rhodanese Homology Domain BN117_0810 SM00382 ATPases associated with a variety of cellular activities BN117_0816 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0822 SM00984 UDP binding domain BN117_0834 SM00448 cheY-homologous receiver domain BN117_0834 SM00862 Transcriptional regulatory protein, C terminal BN117_0835 SM00387 Histidine kinase-like ATPases BN117_0835 SM00388 His Kinase A (phosphoacceptor) domain BN117_0842 SM00849 Metallo-beta-lactamase superfamily BN117_0843 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BN117_0843 SM01232 BN117_0843 BN117_0844 SM00028 Tetratricopeptide repeats BN117_0847 SM01400 BN117_0847 BN117_0866 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0866 SM00895 BN117_0866 BN117_0870 SM00919 Malic enzyme, NAD binding domain BN117_0870 SM01274 BN117_0870 BN117_0874 SM00382 ATPases associated with a variety of cellular activities BN117_0881 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BN117_0888 SM00382 ATPases associated with a variety of cellular activities BN117_0888 SM00962 SRP54-type protein, GTPase domain BN117_0888 SM00963 SRP54-type protein, helical bundle domain BN117_0889 SM00880 BN117_0889 BN117_0889 SM01118 BN117_0889 BN117_0894 SM00346 helix_turn_helix isocitrate lyase regulation BN117_0902 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BN117_0906 SM00869 Autotransporter beta-domain BN117_0918 SM00344 helix_turn_helix ASNC type BN117_0920 SM00151 SWI complex, BAF60b domains BN117_0923 SM00382 ATPases associated with a variety of cellular activities BN117_0936 SM00842 Cell division protein FtsA BN117_0937 SM00864 Tubulin/FtsZ family, GTPase domain BN117_0937 SM00865 Tubulin/FtsZ family, C-terminal domain BN117_0941 SM00957 SecA DEAD-like domain BN117_0941 SM00958 SecA preprotein cross-linking domain BN117_0947 SM00344 helix_turn_helix ASNC type BN117_0950 SM00116 Domain in cystathionine beta-synthase and other proteins. BN117_0950 SM00924 MgtE intracellular N domain BN117_0959 SM00382 ATPases associated with a variety of cellular activities BN117_0959 SM00930 BN117_0959 BN117_0966 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_0966 SM00895 BN117_0966 BN117_0972 SM00382 ATPases associated with a variety of cellular activities BN117_0976 SM00422 helix_turn_helix, mercury resistance BN117_0980 SM00822 BN117_0980 BN117_0989 SM00867 YceI-like domain BN117_0990 SM00965 Secretin and TonB N terminus short domain BN117_0996 SM00346 helix_turn_helix isocitrate lyase regulation BN117_1000 SM00382 ATPases associated with a variety of cellular activities BN117_1012 SM00650 Ribosomal RNA adenine dimethylases BN117_1020 SM00563 Phosphate acyltransferases BN117_1028 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1028 SM00866 BN117_1028 BN117_1039 SM00382 ATPases associated with a variety of cellular activities BN117_1042 SM00853 MutL C terminal dimerisation domain BN117_1042 SM01340 BN117_1042 BN117_1044 SM00646 BN117_1044 BN117_1057 SM00903 Flavin reductase like domain BN117_1062 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1062 SM00866 BN117_1062 BN117_1068 SM00382 ATPases associated with a variety of cellular activities BN117_1075 SM00382 ATPases associated with a variety of cellular activities BN117_1076 SM00382 ATPases associated with a variety of cellular activities BN117_1081 SM00382 ATPases associated with a variety of cellular activities BN117_1090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_1090 SM00387 Histidine kinase-like ATPases BN117_1091 SM00448 cheY-homologous receiver domain BN117_1091 SM00862 Transcriptional regulatory protein, C terminal BN117_1093 SM00341 Helicase and RNase D C-terminal BN117_1093 SM00487 DEAD-like helicases superfamily BN117_1093 SM00490 helicase superfamily c-terminal domain BN117_1093 SM00956 BN117_1093 BN117_1094 SM00382 ATPases associated with a variety of cellular activities BN117_1097 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BN117_1099 SM00798 AICARFT/IMPCHase bienzyme BN117_1099 SM00851 MGS-like domain BN117_1104 SM01011 Aminopeptidase P, N-terminal domain BN117_1117 SM00487 DEAD-like helicases superfamily BN117_1117 SM00490 helicase superfamily c-terminal domain BN117_1120 SM00852 Probable molybdopterin binding domain BN117_1121 SM00346 helix_turn_helix isocitrate lyase regulation BN117_1139 SM00422 helix_turn_helix, mercury resistance BN117_1139 SM00530 Helix-turn-helix XRE-family like proteins BN117_1143 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1143 SM00895 BN117_1143 BN117_1181 SM00271 DnaJ molecular chaperone homology domain BN117_1186 SM00382 ATPases associated with a variety of cellular activities BN117_1190 SM01329 BN117_1190 BN117_1193 SM00448 cheY-homologous receiver domain BN117_1193 SM00862 Transcriptional regulatory protein, C terminal BN117_1194 SM00387 Histidine kinase-like ATPases BN117_1194 SM00388 His Kinase A (phosphoacceptor) domain BN117_1201 SM00463 Small MutS-related domain BN117_1203 SM00843 BN117_1203 BN117_1205 SM00382 ATPases associated with a variety of cellular activities BN117_1210 SM00855 Phosphoglycerate mutase family BN117_1212 SM00382 ATPases associated with a variety of cellular activities BN117_1216 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BN117_1216 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_1218 SM01103 BN117_1218 BN117_1220 SM00382 ATPases associated with a variety of cellular activities BN117_1229 SM00382 ATPases associated with a variety of cellular activities BN117_1235 SM00947 Carbonic anhydrase BN117_1240 SM01236 BN117_1240 BN117_1241 SM00382 ATPases associated with a variety of cellular activities BN117_1242 SM00382 ATPases associated with a variety of cellular activities BN117_1246 SM00382 ATPases associated with a variety of cellular activities BN117_1247 SM00382 ATPases associated with a variety of cellular activities BN117_1252 SM00346 helix_turn_helix isocitrate lyase regulation BN117_1263 SM00382 ATPases associated with a variety of cellular activities BN117_1264 SM00382 ATPases associated with a variety of cellular activities BN117_1267 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1267 SM00895 BN117_1267 BN117_1268 SM00886 Stress responsive A/B Barrel Domain BN117_1269 SM00822 BN117_1269 BN117_1276 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1276 SM00895 BN117_1276 BN117_1277 SM00344 helix_turn_helix ASNC type BN117_1280 SM00062 Bacterial periplasmic substrate-binding proteins BN117_1303 SM00450 Rhodanese Homology Domain BN117_1309 SM00382 ATPases associated with a variety of cellular activities BN117_1310 SM00382 ATPases associated with a variety of cellular activities BN117_1318 SM00382 ATPases associated with a variety of cellular activities BN117_1333 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1333 SM00866 BN117_1333 BN117_1334 SM00878 Biotin carboxylase C-terminal domain BN117_1338 SM00881 CoA binding domain BN117_1357 SM00382 ATPases associated with a variety of cellular activities BN117_1358 SM00382 ATPases associated with a variety of cellular activities BN117_1362 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1362 SM00895 BN117_1362 BN117_1390 SM00382 ATPases associated with a variety of cellular activities BN117_1404 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_1404 SM00331 Sigma factor PP2C-like phosphatases BN117_1404 SM01049 BN117_1404 BN117_1406 SM01005 Alanine racemase, C-terminal domain BN117_1409 SM00155 Phospholipase D. Active site motifs. BN117_1416 SM01130 BN117_1416 BN117_1419 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BN117_1420 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BN117_1420 SM00534 ATPase domain of DNA mismatch repair MUTS family BN117_1429 SM00346 helix_turn_helix isocitrate lyase regulation BN117_1433 SM01091 Transporter associated domain BN117_1437 SM00028 Tetratricopeptide repeats BN117_1438 SM00840 BN117_1438 BN117_1439 SM00478 endonuclease III BN117_1458 SM00382 ATPases associated with a variety of cellular activities BN117_1460 SM00346 helix_turn_helix isocitrate lyase regulation BN117_1467 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BN117_1472 SM00028 Tetratricopeptide repeats BN117_1474 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_1477 SM00382 ATPases associated with a variety of cellular activities BN117_1478 SM00382 ATPases associated with a variety of cellular activities BN117_1486 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BN117_1489 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_1501 SM00421 helix_turn_helix, Lux Regulon BN117_1502 SM00421 helix_turn_helix, Lux Regulon BN117_1511 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1515 SM00318 Staphylococcal nuclease homologues BN117_1519 SM00382 ATPases associated with a variety of cellular activities BN117_1520 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_1528 SM00858 BN117_1528 BN117_1534 SM00028 Tetratricopeptide repeats BN117_1537 SM00382 ATPases associated with a variety of cellular activities BN117_1543 SM00841 Elongation factor P, C-terminal BN117_1543 SM01185 BN117_1543 BN117_1554 SM00479 BN117_1554 BN117_1576 SM00411 bacterial (prokaryotic) histone like domain BN117_1584 SM00382 ATPases associated with a variety of cellular activities BN117_1588 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1588 SM00895 BN117_1588 BN117_1596 SM00382 ATPases associated with a variety of cellular activities BN117_1604 SM00380 DNA-binding domain in plant proteins such as APETALA2 and EREBPs BN117_1616 SM00530 Helix-turn-helix XRE-family like proteins BN117_1652 SM00434 DNA Topoisomerase IV BN117_1654 SM00830 Chorismate mutase type II BN117_1658 SM00316 Ribosomal protein S1-like RNA-binding domain BN117_1659 SM00411 bacterial (prokaryotic) histone like domain BN117_1668 SM00893 Electron transfer flavoprotein domain BN117_1669 SM00893 Electron transfer flavoprotein domain BN117_1675 SM00382 ATPases associated with a variety of cellular activities BN117_1679 SM00729 Elongator protein 3, MiaB family, Radical SAM BN117_1687 SM00479 BN117_1687 BN117_1710 SM00382 ATPases associated with a variety of cellular activities BN117_1723 SM00382 ATPases associated with a variety of cellular activities BN117_1723 SM00487 DEAD-like helicases superfamily BN117_1723 SM00490 helicase superfamily c-terminal domain BN117_1723 SM00847 Helicase associated domain (HA2) Add an annotation BN117_1725 SM00481 DNA polymerase alpha chain like domain BN117_1736 SM00382 ATPases associated with a variety of cellular activities BN117_1740 SM00316 Ribosomal protein S1-like RNA-binding domain BN117_1747 SM01209 BN117_1747 BN117_1747 SM01210 BN117_1747 BN117_1758 SM00382 ATPases associated with a variety of cellular activities BN117_1762 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1763 SM01329 BN117_1763 BN117_1767 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_1771 SM00829 Enoylreductase BN117_1774 SM00450 Rhodanese Homology Domain BN117_1777 SM00382 ATPases associated with a variety of cellular activities BN117_1782 SM00965 Secretin and TonB N terminus short domain BN117_1786 SM00346 helix_turn_helix isocitrate lyase regulation BN117_1789 SM00861 Transketolase, pyrimidine binding domain BN117_1797 SM00382 ATPases associated with a variety of cellular activities BN117_1800 SM00670 Large family of predicted nucleotide-binding domains BN117_1811 SM00528 Domain in histone-like proteins of HNS family BN117_1815 SM00912 haemagglutination activity domain BN117_1822 SM00342 helix_turn_helix, arabinose operon control protein BN117_1825 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BN117_1825 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BN117_1840 SM00267 diguanylate cyclase BN117_1841 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BN117_1849 SM00155 Phospholipase D. Active site motifs. BN117_1854 SM01144 BN117_1854 BN117_1855 SM00316 Ribosomal protein S1-like RNA-binding domain BN117_1855 SM00357 Cold shock protein domain BN117_1855 SM00955 BN117_1855 BN117_1856 SM00967 RNA 2'-O ribose methyltransferase substrate binding BN117_1858 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BN117_1859 SM00411 bacterial (prokaryotic) histone like domain BN117_1863 SM00448 cheY-homologous receiver domain BN117_1863 SM00862 Transcriptional regulatory protein, C terminal BN117_1864 SM00387 Histidine kinase-like ATPases BN117_1864 SM00388 His Kinase A (phosphoacceptor) domain BN117_1875 SM01130 BN117_1875 BN117_1876 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_1876 SM00895 BN117_1876 BN117_1884 SM00822 BN117_1884 BN117_1896 SM00357 Cold shock protein domain BN117_1898 SM01359 BN117_1898 BN117_1898 SM01360 BN117_1898 BN117_1900 SM00382 ATPases associated with a variety of cellular activities BN117_1900 SM01086 C-terminal, D2-small domain, of ClpB protein BN117_1908 SM00382 ATPases associated with a variety of cellular activities BN117_1909 SM00382 ATPases associated with a variety of cellular activities BN117_1914 SM00938 Nitrogen regulatory protein P-II BN117_1916 SM00382 ATPases associated with a variety of cellular activities BN117_1920 SM00873 B3/4 domain BN117_1920 SM00874 tRNA synthetase B5 domain BN117_1920 SM00896 Ferredoxin-fold anticodon binding domain BN117_1921 SM00411 bacterial (prokaryotic) histone like domain BN117_1922 SM00422 helix_turn_helix, mercury resistance BN117_1929 SM00344 helix_turn_helix ASNC type BN117_1946 SM00822 BN117_1946 BN117_1949 SM00382 ATPases associated with a variety of cellular activities BN117_1953 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_1953 SM00387 Histidine kinase-like ATPases BN117_1953 SM00388 His Kinase A (phosphoacceptor) domain BN117_1954 SM00448 cheY-homologous receiver domain BN117_1954 SM00862 Transcriptional regulatory protein, C terminal BN117_1955 SM00382 ATPases associated with a variety of cellular activities BN117_1961 SM00881 CoA binding domain BN117_1976 SM00858 BN117_1976 BN117_1978 SM00240 Forkhead associated domain BN117_1988 SM00448 cheY-homologous receiver domain BN117_1988 SM00862 Transcriptional regulatory protein, C terminal BN117_1989 SM00052 Putative diguanylate phosphodiesterase BN117_1989 SM00267 diguanylate cyclase BN117_1989 SM00387 Histidine kinase-like ATPases BN117_1989 SM00388 His Kinase A (phosphoacceptor) domain BN117_1990 SM00052 Putative diguanylate phosphodiesterase BN117_1994 SM00852 Probable molybdopterin binding domain BN117_2008 SM00382 ATPases associated with a variety of cellular activities BN117_2012 SM01329 BN117_2012 BN117_2013 SM00859 Semialdehyde dehydrogenase, NAD binding domain BN117_2029 SM00421 helix_turn_helix, Lux Regulon BN117_2029 SM00448 cheY-homologous receiver domain BN117_2030 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BN117_2040 SM00062 Bacterial periplasmic substrate-binding proteins BN117_2043 SM00382 ATPases associated with a variety of cellular activities BN117_2048 SM00344 helix_turn_helix ASNC type BN117_2053 SM00904 Riboflavin kinase BN117_2059 SM00965 Secretin and TonB N terminus short domain BN117_2060 SM00382 ATPases associated with a variety of cellular activities BN117_2069 SM00380 DNA-binding domain in plant proteins such as APETALA2 and EREBPs BN117_2123 SM00869 Autotransporter beta-domain BN117_2126 SM00357 Cold shock protein domain BN117_2128 SM00357 Cold shock protein domain BN117_2132 SM00382 ATPases associated with a variety of cellular activities BN117_2132 SM00994 ClpX C4-type zinc finger BN117_2132 SM01086 C-terminal, D2-small domain, of ClpB protein BN117_2133 SM00382 ATPases associated with a variety of cellular activities BN117_2133 SM00464 Found in ATP-dependent protease La (LON) BN117_2145 SM00882 Coenzyme A transferase BN117_2148 SM00869 Autotransporter beta-domain BN117_2151 SM00487 DEAD-like helicases superfamily BN117_2151 SM00490 helicase superfamily c-terminal domain BN117_2152 SM00226 Low molecular weight phosphatase family BN117_2157 SM00271 DnaJ molecular chaperone homology domain BN117_2167 SM00382 ATPases associated with a variety of cellular activities BN117_2172 SM00822 BN117_2172 BN117_2177 SM00382 ATPases associated with a variety of cellular activities BN117_2179 SM00869 Autotransporter beta-domain BN117_2182 SM00849 Metallo-beta-lactamase superfamily BN117_2184 SM00481 DNA polymerase alpha chain like domain BN117_2189 SM01211 BN117_2189 BN117_2190 SM00912 haemagglutination activity domain BN117_2201 SM00421 helix_turn_helix, Lux Regulon BN117_2202 SM00869 Autotransporter beta-domain BN117_2204 SM00116 Domain in cystathionine beta-synthase and other proteins. BN117_2204 SM01240 BN117_2204 BN117_2225 SM00974 BN117_2225 BN117_2231 SM00382 ATPases associated with a variety of cellular activities BN117_2255 SM00849 Metallo-beta-lactamase superfamily BN117_2255 SM01027 Beta-Casp domain BN117_2256 SM00342 helix_turn_helix, arabinose operon control protein BN117_2271 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2280 SM00354 helix_turn _helix lactose operon repressor BN117_2282 SM00422 helix_turn_helix, mercury resistance BN117_2287 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2287 SM00866 BN117_2287 BN117_2292 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2292 SM00895 BN117_2292 BN117_2297 SM00382 ATPases associated with a variety of cellular activities BN117_2302 SM00382 ATPases associated with a variety of cellular activities BN117_2310 SM00342 helix_turn_helix, arabinose operon control protein BN117_2314 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BN117_2317 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2317 SM00895 BN117_2317 BN117_2321 SM00382 ATPases associated with a variety of cellular activities BN117_2327 SM00464 Found in ATP-dependent protease La (LON) BN117_2329 SM00342 helix_turn_helix, arabinose operon control protein BN117_2331 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BN117_2342 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2359 SM00382 ATPases associated with a variety of cellular activities BN117_2361 SM00062 Bacterial periplasmic substrate-binding proteins BN117_2363 SM00422 helix_turn_helix, mercury resistance BN117_2368 SM00938 Nitrogen regulatory protein P-II BN117_2370 SM00363 S4 RNA-binding domain BN117_2378 SM00382 ATPases associated with a variety of cellular activities BN117_2380 SM01322 BN117_2380 BN117_2392 SM00421 helix_turn_helix, Lux Regulon BN117_2392 SM00448 cheY-homologous receiver domain BN117_2393 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BN117_2393 SM00091 PAS domain BN117_2393 SM00387 Histidine kinase-like ATPases BN117_2393 SM00388 His Kinase A (phosphoacceptor) domain BN117_2403 SM00448 cheY-homologous receiver domain BN117_2404 SM00073 Histidine Phosphotransfer domain BN117_2404 SM00260 Two component signalling adaptor domain BN117_2404 SM00387 Histidine kinase-like ATPases BN117_2404 SM01231 BN117_2404 BN117_2405 SM00260 Two component signalling adaptor domain BN117_2406 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BN117_2406 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_2407 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BN117_2418 SM00382 ATPases associated with a variety of cellular activities BN117_2436 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BN117_2445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BN117_2447 SM00935 Outer membrane protein (OmpH-like) BN117_2458 SM00244 prohibitin homologues BN117_2459 SM00267 diguanylate cyclase BN117_2473 SM00248 ankyrin repeats BN117_2474 SM00346 helix_turn_helix isocitrate lyase regulation BN117_2475 SM00062 Bacterial periplasmic substrate-binding proteins BN117_2475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BN117_2477 SM00382 ATPases associated with a variety of cellular activities BN117_2479 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BN117_2486 SM00267 diguanylate cyclase BN117_2489 SM00052 Putative diguanylate phosphodiesterase BN117_2489 SM00448 cheY-homologous receiver domain BN117_2501 SM00346 helix_turn_helix isocitrate lyase regulation BN117_2507 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2507 SM00866 BN117_2507 BN117_2520 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2520 SM00895 BN117_2520 BN117_2522 SM00530 Helix-turn-helix XRE-family like proteins BN117_2535 SM00421 helix_turn_helix, Lux Regulon BN117_2535 SM00448 cheY-homologous receiver domain BN117_2537 SM00530 Helix-turn-helix XRE-family like proteins BN117_2544 SM00346 helix_turn_helix isocitrate lyase regulation BN117_2560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BN117_2566 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BN117_2566 SM00091 PAS domain BN117_2566 SM00267 diguanylate cyclase BN117_2569 SM00244 prohibitin homologues BN117_2571 SM00382 ATPases associated with a variety of cellular activities BN117_2573 SM00062 Bacterial periplasmic substrate-binding proteins BN117_2573 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BN117_2576 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BN117_2579 SM00382 ATPases associated with a variety of cellular activities BN117_2585 SM00028 Tetratricopeptide repeats BN117_2589 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BN117_2593 SM00354 helix_turn _helix lactose operon repressor BN117_2598 SM00881 CoA binding domain BN117_2599 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2599 SM00895 BN117_2599 BN117_2603 SM00382 ATPases associated with a variety of cellular activities BN117_2609 SM00642 Alpha-amylase domain BN117_2631 SM00953 BN117_2631 BN117_2639 SM00382 ATPases associated with a variety of cellular activities BN117_2640 SM00382 ATPases associated with a variety of cellular activities BN117_2649 SM00382 ATPases associated with a variety of cellular activities BN117_2652 SM00825 Beta-ketoacyl synthase BN117_2652 SM00826 BN117_2652 BN117_2652 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BN117_2659 SM00984 UDP binding domain BN117_2674 SM00487 DEAD-like helicases superfamily BN117_2674 SM00490 helicase superfamily c-terminal domain BN117_2676 SM00869 Autotransporter beta-domain BN117_2683 SM00382 ATPases associated with a variety of cellular activities BN117_2687 SM00382 ATPases associated with a variety of cellular activities BN117_2687 SM00448 cheY-homologous receiver domain BN117_2688 SM00091 PAS domain BN117_2688 SM00387 Histidine kinase-like ATPases BN117_2688 SM00388 His Kinase A (phosphoacceptor) domain BN117_2689 SM01230 BN117_2689 BN117_2690 SM00729 Elongator protein 3, MiaB family, Radical SAM BN117_2692 SM00052 Putative diguanylate phosphodiesterase BN117_2692 SM00267 diguanylate cyclase BN117_2693 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BN117_2693 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_2699 SM00530 Helix-turn-helix XRE-family like proteins BN117_2702 SM00822 BN117_2702 BN117_2705 SM00072 Guanylate kinase homologues. BN117_2706 SM01409 BN117_2706 BN117_2707 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BN117_2707 SM00954 Region found in RelA / SpoT proteins BN117_2708 SM00382 ATPases associated with a variety of cellular activities BN117_2710 SM00062 Bacterial periplasmic substrate-binding proteins BN117_2710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BN117_2727 SM00912 haemagglutination activity domain BN117_2728 SM00421 helix_turn_helix, Lux Regulon BN117_2728 SM00448 cheY-homologous receiver domain BN117_2729 SM00062 Bacterial periplasmic substrate-binding proteins BN117_2729 SM00073 Histidine Phosphotransfer domain BN117_2729 SM00091 PAS domain BN117_2729 SM00387 Histidine kinase-like ATPases BN117_2729 SM00388 His Kinase A (phosphoacceptor) domain BN117_2729 SM00448 cheY-homologous receiver domain BN117_2730 SM00052 Putative diguanylate phosphodiesterase BN117_2740 SM00382 ATPases associated with a variety of cellular activities BN117_2748 SM00422 helix_turn_helix, mercury resistance BN117_2753 SM00257 Lysin motif BN117_2756 SM01207 BN117_2756 BN117_2765 SM00382 ATPases associated with a variety of cellular activities BN117_2766 SM00382 ATPases associated with a variety of cellular activities BN117_2785 SM00344 helix_turn_helix ASNC type BN117_2792 SM00382 ATPases associated with a variety of cellular activities BN117_2793 SM00382 ATPases associated with a variety of cellular activities BN117_2794 SM00420 helix_turn_helix, Deoxyribose operon repressor BN117_2794 SM01134 BN117_2794 BN117_2796 SM00346 helix_turn_helix isocitrate lyase regulation BN117_2805 SM01130 BN117_2805 BN117_2813 SM01007 Class II Aldolase and Adducin N-terminal domain BN117_2814 SM00530 Helix-turn-helix XRE-family like proteins BN117_2815 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_2823 SM00481 DNA polymerase alpha chain like domain BN117_2849 SM00267 diguanylate cyclase BN117_2850 SM00091 PAS domain BN117_2850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BN117_2851 SM00052 Putative diguanylate phosphodiesterase BN117_2861 SM00091 PAS domain BN117_2861 SM00382 ATPases associated with a variety of cellular activities BN117_2887 SM00382 ATPases associated with a variety of cellular activities BN117_2888 SM00382 ATPases associated with a variety of cellular activities BN117_2917 SM00788 Adenylosuccinate synthetase BN117_2919 SM00244 prohibitin homologues BN117_2920 SM00244 prohibitin homologues BN117_2924 SM00382 ATPases associated with a variety of cellular activities BN117_2925 SM00564 beta-propeller repeat BN117_2931 SM00562 BN117_2931 BN117_2934 SM00448 cheY-homologous receiver domain BN117_2934 SM00862 Transcriptional regulatory protein, C terminal BN117_2943 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BN117_2954 SM00382 ATPases associated with a variety of cellular activities BN117_2966 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_2966 SM00866 BN117_2966 BN117_2974 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_2980 SM00434 DNA Topoisomerase IV BN117_2982 SM00387 Histidine kinase-like ATPases BN117_2982 SM00433 TopoisomeraseII BN117_2984 SM00357 Cold shock protein domain BN117_2984 SM00382 ATPases associated with a variety of cellular activities BN117_2984 SM00959 Rho termination factor, N-terminal domain BN117_2992 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BN117_2992 SM00474 3'-5' exonuclease BN117_2992 SM00475 5'-3' exonuclease BN117_2992 SM00482 DNA polymerase A domain BN117_3000 SM00316 Ribosomal protein S1-like RNA-binding domain BN117_3002 SM00363 S4 RNA-binding domain BN117_3006 SM00833 Cobalamin synthesis protein cobW C-terminal domain BN117_3019 SM00382 ATPases associated with a variety of cellular activities BN117_3020 SM00327 von Willebrand factor (vWF) type A domain BN117_3024 SM01005 Alanine racemase, C-terminal domain BN117_3030 SM00382 ATPases associated with a variety of cellular activities BN117_3043 SM00869 Autotransporter beta-domain BN117_3044 SM00869 Autotransporter beta-domain BN117_3045 SM00382 ATPases associated with a variety of cellular activities BN117_3045 SM01086 C-terminal, D2-small domain, of ClpB protein BN117_3046 SM00419 helix_turn_helix, cAMP Regulatory protein BN117_3059 SM00062 Bacterial periplasmic substrate-binding proteins BN117_3062 SM00382 ATPases associated with a variety of cellular activities BN117_3069 SM00052 Putative diguanylate phosphodiesterase BN117_3069 SM00267 diguanylate cyclase BN117_3072 SM00382 ATPases associated with a variety of cellular activities BN117_3095 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BN117_3095 SM00465 GIY-YIG type nucleases (URI domain) BN117_3102 SM00862 Transcriptional regulatory protein, C terminal BN117_3126 SM00382 ATPases associated with a variety of cellular activities BN117_3129 SM00062 Bacterial periplasmic substrate-binding proteins BN117_3139 SM00267 diguanylate cyclase BN117_3146 SM00382 ATPases associated with a variety of cellular activities BN117_3148 SM01209 BN117_3148 BN117_3151 SM00749 bacterial OsmY and nodulation domain BN117_3159 SM00822 BN117_3159 BN117_3162 SM00363 S4 RNA-binding domain BN117_3164 SM00491 BN117_3164 BN117_3165 SM00316 Ribosomal protein S1-like RNA-binding domain BN117_3165 SM00732 Likely ribonuclease with RNase H fold. BN117_3170 SM00965 Secretin and TonB N terminus short domain BN117_3181 SM00861 Transketolase, pyrimidine binding domain BN117_3185 SM00919 Malic enzyme, NAD binding domain BN117_3185 SM01274 BN117_3185 BN117_3195 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3195 SM00866 BN117_3195 BN117_3203 SM00981 BN117_3203 BN117_3214 SM00028 Tetratricopeptide repeats BN117_3214 SM00862 Transcriptional regulatory protein, C terminal BN117_3216 SM01192 BN117_3216 BN117_3216 SM01193 BN117_3216 BN117_3226 SM00382 ATPases associated with a variety of cellular activities BN117_3229 SM00882 Coenzyme A transferase BN117_3230 SM00882 Coenzyme A transferase BN117_3259 SM00358 Double-stranded RNA binding motif BN117_3259 SM00535 Ribonuclease III family BN117_3261 SM00838 Elongation factor G C-terminus BN117_3262 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BN117_3267 SM00825 Beta-ketoacyl synthase BN117_3269 SM00822 BN117_3269 BN117_3270 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BN117_3277 SM00644 BN117_3277 BN117_3281 SM00363 S4 RNA-binding domain BN117_3282 SM00316 Ribosomal protein S1-like RNA-binding domain BN117_3289 SM00954 Region found in RelA / SpoT proteins BN117_3298 SM00478 endonuclease III BN117_3298 SM00525 BN117_3298 BN117_3299 SM00382 ATPases associated with a variety of cellular activities BN117_3300 SM00382 ATPases associated with a variety of cellular activities BN117_3306 SM00382 ATPases associated with a variety of cellular activities BN117_3307 SM00382 ATPases associated with a variety of cellular activities BN117_3312 SM00382 ATPases associated with a variety of cellular activities BN117_3317 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BN117_3317 SM00292 breast cancer carboxy-terminal domain BN117_3317 SM00532 Ligase N family BN117_3318 SM00771 ZipA, C-terminal domain (FtsZ-binding) BN117_3319 SM00968 SMC proteins Flexible Hinge Domain BN117_3321 SM00986 Uracil DNA glycosylase superfamily BN117_3321 SM00987 UreE urease accessory protein, C-terminal domain BN117_3323 SM00448 cheY-homologous receiver domain BN117_3323 SM00862 Transcriptional regulatory protein, C terminal BN117_3324 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_3324 SM00387 Histidine kinase-like ATPases BN117_3324 SM00388 His Kinase A (phosphoacceptor) domain BN117_3327 SM00342 helix_turn_helix, arabinose operon control protein BN117_3331 SM00487 DEAD-like helicases superfamily BN117_3331 SM00490 helicase superfamily c-terminal domain BN117_3331 SM00982 BN117_3331 BN117_3331 SM01058 CarD-like/TRCF domain BN117_3348 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BN117_3349 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BN117_3359 SM00014 Acid phosphatase homologues BN117_3370 SM00346 helix_turn_helix isocitrate lyase regulation BN117_3375 SM00450 Rhodanese Homology Domain BN117_3386 SM00346 helix_turn_helix isocitrate lyase regulation BN117_3390 SM00829 Enoylreductase BN117_3394 SM00316 Ribosomal protein S1-like RNA-binding domain BN117_3394 SM00322 K homology RNA-binding domain BN117_3395 SM01387 BN117_3395 BN117_3408 SM01006 Siderophore biosynthesis protein domain BN117_3412 SM00342 helix_turn_helix, arabinose operon control protein BN117_3416 SM00267 diguanylate cyclase BN117_3421 SM00851 MGS-like domain BN117_3421 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BN117_3422 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BN117_3425 SM00382 ATPases associated with a variety of cellular activities BN117_3426 SM00062 Bacterial periplasmic substrate-binding proteins BN117_3428 SM00493 BN117_3428 BN117_3430 SM00382 ATPases associated with a variety of cellular activities BN117_3445 SM00382 ATPases associated with a variety of cellular activities BN117_3447 SM00062 Bacterial periplasmic substrate-binding proteins BN117_3447 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BN117_3449 SM00346 helix_turn_helix isocitrate lyase regulation BN117_3450 SM00062 Bacterial periplasmic substrate-binding proteins BN117_3453 SM01001 AIR carboxylase BN117_3462 SM00421 helix_turn_helix, Lux Regulon BN117_3465 SM00834 Putative regulatory protein BN117_3468 SM00316 Ribosomal protein S1-like RNA-binding domain BN117_3472 SM00852 Probable molybdopterin binding domain BN117_3487 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BN117_3488 SM00861 Transketolase, pyrimidine binding domain BN117_3492 SM00919 Malic enzyme, NAD binding domain BN117_3492 SM01274 BN117_3492 BN117_3502 SM00869 Autotransporter beta-domain BN117_3507 SM01323 BN117_3507 BN117_3510 SM00014 Acid phosphatase homologues BN117_3511 SM00729 Elongator protein 3, MiaB family, Radical SAM BN117_3514 SM01091 Transporter associated domain BN117_3517 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3517 SM00895 BN117_3517 BN117_3531 SM00729 Elongator protein 3, MiaB family, Radical SAM BN117_3531 SM00876 Biotin and Thiamin Synthesis associated domain BN117_3541 SM00852 Probable molybdopterin binding domain BN117_3542 SM00852 Probable molybdopterin binding domain BN117_3543 SM00729 Elongator protein 3, MiaB family, Radical SAM BN117_3546 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BN117_3547 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BN117_3547 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BN117_3571 SM00257 Lysin motif BN117_3581 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BN117_3586 SM00448 cheY-homologous receiver domain BN117_3587 SM00387 Histidine kinase-like ATPases BN117_3598 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BN117_3606 SM00342 helix_turn_helix, arabinose operon control protein BN117_3610 SM00346 helix_turn_helix isocitrate lyase regulation BN117_3620 SM00382 ATPases associated with a variety of cellular activities BN117_3620 SM00464 Found in ATP-dependent protease La (LON) BN117_3627 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3633 SM00478 endonuclease III BN117_3660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BN117_3676 SM00822 BN117_3676 BN117_3683 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BN117_3687 SM00382 ATPases associated with a variety of cellular activities BN117_3689 SM00421 helix_turn_helix, Lux Regulon BN117_3690 SM00327 von Willebrand factor (vWF) type A domain BN117_3690 SM00736 Dystroglycan-type cadherin-like domains. BN117_3692 SM00052 Putative diguanylate phosphodiesterase BN117_3692 SM00267 diguanylate cyclase BN117_3695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BN117_3699 SM00829 Enoylreductase BN117_3702 SM00382 ATPases associated with a variety of cellular activities BN117_3707 SM00344 helix_turn_helix ASNC type BN117_3712 SM00248 ankyrin repeats BN117_3715 SM00382 ATPases associated with a variety of cellular activities BN117_3716 SM00382 ATPases associated with a variety of cellular activities BN117_3723 SM00346 helix_turn_helix isocitrate lyase regulation BN117_3726 SM00382 ATPases associated with a variety of cellular activities BN117_3731 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3731 SM00895 BN117_3731 BN117_3745 SM00382 ATPases associated with a variety of cellular activities BN117_3774 SM01329 BN117_3774 BN117_3783 SM00382 ATPases associated with a variety of cellular activities BN117_3793 SM00382 ATPases associated with a variety of cellular activities BN117_3798 SM00267 diguanylate cyclase BN117_3817 SM00346 helix_turn_helix isocitrate lyase regulation BN117_3826 SM00883 Chaperonin 10 Kd subunit BN117_3836 SM00387 Histidine kinase-like ATPases BN117_3836 SM00388 His Kinase A (phosphoacceptor) domain BN117_3837 SM00448 cheY-homologous receiver domain BN117_3837 SM00862 Transcriptional regulatory protein, C terminal BN117_3848 SM00382 ATPases associated with a variety of cellular activities BN117_3851 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_3866 SM00838 Elongation factor G C-terminus BN117_3866 SM00889 Elongation factor G, domain IV BN117_3870 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3883 SM00479 BN117_3883 BN117_3888 SM00849 Metallo-beta-lactamase superfamily BN117_3889 SM00257 Lysin motif BN117_3910 SM00829 Enoylreductase BN117_3913 SM00382 ATPases associated with a variety of cellular activities BN117_3916 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3919 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3928 SM00988 UreE urease accessory protein, N-terminal domain BN117_3934 SM00422 helix_turn_helix, mercury resistance BN117_3937 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3937 SM00866 BN117_3937 BN117_3944 SM00763 PrkA AAA domain BN117_3951 SM00363 S4 RNA-binding domain BN117_3956 SM00859 Semialdehyde dehydrogenase, NAD binding domain BN117_3964 SM00382 ATPases associated with a variety of cellular activities BN117_3968 SM00487 DEAD-like helicases superfamily BN117_3968 SM00490 helicase superfamily c-terminal domain BN117_3970 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_3970 SM00895 BN117_3970 BN117_3990 SM00878 Biotin carboxylase C-terminal domain BN117_3996 SM00955 BN117_3996 BN117_4002 SM00563 Phosphate acyltransferases BN117_4005 SM00732 Likely ribonuclease with RNase H fold. BN117_4020 SM00382 ATPases associated with a variety of cellular activities BN117_4025 SM00347 helix_turn_helix multiple antibiotic resistance protein BN117_4038 SM00421 helix_turn_helix, Lux Regulon BN117_4046 SM00382 ATPases associated with a variety of cellular activities BN117_4049 SM00062 Bacterial periplasmic substrate-binding proteins BN117_4050 SM00382 ATPases associated with a variety of cellular activities BN117_4054 SM00478 endonuclease III BN117_4055 SM00530 Helix-turn-helix XRE-family like proteins BN117_4057 SM01018 B12 binding domain BN117_4068 SM00978 BN117_4068 BN117_4070 SM00448 cheY-homologous receiver domain BN117_4070 SM00862 Transcriptional regulatory protein, C terminal BN117_4071 SM00091 PAS domain BN117_4071 SM00387 Histidine kinase-like ATPases BN117_4071 SM00388 His Kinase A (phosphoacceptor) domain BN117_4072 SM00448 cheY-homologous receiver domain BN117_4072 SM00862 Transcriptional regulatory protein, C terminal BN117_4073 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BN117_4073 SM00387 Histidine kinase-like ATPases BN117_4073 SM00388 His Kinase A (phosphoacceptor) domain BN117_4078 SM00796 Allophanate hydrolase subunit 1 BN117_4079 SM00797 Allophanate hydrolase subunit 2 BN117_4081 SM00346 helix_turn_helix isocitrate lyase regulation BN117_4087 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_4087 SM00895 BN117_4087 BN117_4095 SM00382 ATPases associated with a variety of cellular activities BN117_4096 SM00382 ATPases associated with a variety of cellular activities BN117_4102 SM00116 Domain in cystathionine beta-synthase and other proteins. BN117_4106 SM00382 ATPases associated with a variety of cellular activities BN117_4118 SM00749 bacterial OsmY and nodulation domain BN117_4133 SM00845 GatB domain BN117_4136 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BN117_4140 SM01329 BN117_4140 BN117_4143 SM00448 cheY-homologous receiver domain BN117_4143 SM00862 Transcriptional regulatory protein, C terminal BN117_4144 SM00387 Histidine kinase-like ATPases BN117_4147 SM00062 Bacterial periplasmic substrate-binding proteins BN117_4150 SM00382 ATPases associated with a variety of cellular activities BN117_4158 SM00421 helix_turn_helix, Lux Regulon BN117_4168 SM00354 helix_turn _helix lactose operon repressor BN117_4171 SM00382 ATPases associated with a variety of cellular activities BN117_4172 SM00382 ATPases associated with a variety of cellular activities BN117_4176 SM00346 helix_turn_helix isocitrate lyase regulation BN117_4197 SM00382 ATPases associated with a variety of cellular activities BN117_4201 SM00487 DEAD-like helicases superfamily BN117_4201 SM00490 helicase superfamily c-terminal domain BN117_4205 SM00382 ATPases associated with a variety of cellular activities BN117_4215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BN117_4217 SM00905 Dihydroneopterin aldolase BN117_4222 SM00925 MltA specific insert domain BN117_4230 SM00822 BN117_4230 BN117_4234 SM00849 Metallo-beta-lactamase superfamily BN117_4240 SM00062 Bacterial periplasmic substrate-binding proteins BN117_4247 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_4247 SM00895 BN117_4247 BN117_4255 SM00965 Secretin and TonB N terminus short domain BN117_4259 SM00382 ATPases associated with a variety of cellular activities BN117_4264 SM00267 diguanylate cyclase BN117_4269 SM00849 Metallo-beta-lactamase superfamily BN117_4272 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_4272 SM00895 BN117_4272 BN117_4285 SM00345 helix_turn_helix gluconate operon transcriptional repressor BN117_4285 SM00895 BN117_4285 BN117_4287 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BN117_4290 SM00346 helix_turn_helix isocitrate lyase regulation BN117_4296 SM00382 ATPases associated with a variety of cellular activities BN117_4297 SM00382 ATPases associated with a variety of cellular activities BN117_4305 SM00861 Transketolase, pyrimidine binding domain BN117_4310 SM00822 BN117_4310 BN117_4315 SM00346 helix_turn_helix isocitrate lyase regulation BN117_4322 SM00382 ATPases associated with a variety of cellular activities BN117_4341 SM00829 Enoylreductase BN117_4343 SM00881 CoA binding domain BN117_4349 SM00344 helix_turn_helix ASNC type BN117_4354 SM00881 CoA binding domain BN117_4356 SM00346 helix_turn_helix isocitrate lyase regulation BN117_4359 SM00342 helix_turn_helix, arabinose operon control protein BN117_4361 SM00984 UDP binding domain BN117_4379 SM00100 Cyclic nucleotide-monophosphate binding domain BN117_4384 SM00829 Enoylreductase BN117_4390 SM00382 ATPases associated with a variety of cellular activities BN117_4395 SM00382 ATPases associated with a variety of cellular activities BN117_4412 SM00530 Helix-turn-helix XRE-family like proteins BN117_4413 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BN117_4427 SM00346 helix_turn_helix isocitrate lyase regulation BN117_4428 SM00450 Rhodanese Homology Domain BN117_4451 SM00342 helix_turn_helix, arabinose operon control protein BN117_4458 SM00382 ATPases associated with a variety of cellular activities BN117_4461 SM00487 DEAD-like helicases superfamily BN117_4461 SM00490 helicase superfamily c-terminal domain BN117_4471 SM00917 LeuA allosteric (dimerisation) domain BN117_4477 SM00382 ATPases associated with a variety of cellular activities BN117_4479 SM00382 ATPases associated with a variety of cellular activities BN117_4485 SM00836 DALR anticodon binding domain BN117_4485 SM01016 Arginyl tRNA synthetase N terminal dom BN117_4490 SM00849 Metallo-beta-lactamase superfamily BN117_4491 SM00422 helix_turn_helix, mercury resistance BN117_4500 SM01119 BN117_4500 BN117_4507 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BN117_4507 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BN117_4507 SM00493 BN117_4507 BN117_4509 SM00382 ATPases associated with a variety of cellular activities BN117_4511 SM00822 BN117_4511 BN117_4515 SM00344 helix_turn_helix ASNC type BN117_4517 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BN117_4523 SM00450 Rhodanese Homology Domain BN117_4526 SM00342 helix_turn_helix, arabinose operon control protein BN117_4526 SM00871 Bacterial transcription activator, effector binding domain BN117_4531 SM00346 helix_turn_helix isocitrate lyase regulation BN117_4532 SM00387 Histidine kinase-like ATPases BN117_4532 SM00433 TopoisomeraseII BN117_4533 SM00480 DNA polymerase III beta subunit BN117_4534 SM00382 ATPases associated with a variety of cellular activities BN117_4534 SM00760 Bacterial dnaA protein helix-turn-helix domain BN117_4537 SM01234 BN117_4537 BN117_4539 SM01060 BN117_4539 BN117_4541 SM00382 ATPases associated with a variety of cellular activities BN117_4545 SM00382 ATPases associated with a variety of cellular activities BN117_4546 SM00382 ATPases associated with a variety of cellular activities BN117_4552 SM00448 cheY-homologous receiver domain BN117_4552 SM00862 Transcriptional regulatory protein, C terminal BN117_4553 SM00387 Histidine kinase-like ATPases BN117_4553 SM00388 His Kinase A (phosphoacceptor) domain BN117_4558 SM00357 Cold shock protein domain