locus-tag class description BN117_0001 PF01134 Glucose inhibited division protein A BN117_0001 PF13932 GidA associated domain BN117_0002 PF02527 rRNA small subunit methyltransferase G BN117_0003 PF13614 AAA domain BN117_0005 PF02195 ParB-like nuclease domain BN117_0005 PF17762 HTH domain found in ParB protein BN117_0006 PF17763 Glutaminase/Asparaginase C-terminal domain BN117_0006 PF00710 Asparaginase, N-terminal BN117_0007 PF00009 Elongation factor Tu GTP binding domain BN117_0007 PF03144 Elongation factor Tu domain 2 BN117_0007 PF03143 Elongation factor Tu C-terminal domain BN117_0008 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BN117_0009 PF00467 KOW motif BN117_0009 PF02357 Transcription termination factor nusG BN117_0010 PF03946 Ribosomal protein L11, N-terminal domain BN117_0010 PF00298 Ribosomal protein L11, RNA binding domain BN117_0011 PF00687 Ribosomal protein L1p/L10e family BN117_0012 PF00466 Ribosomal protein L10 BN117_0013 PF00542 Ribosomal protein L7/L12 C-terminal domain BN117_0013 PF16320 Ribosomal protein L7/L12 dimerisation domain BN117_0014 PF00562 RNA polymerase Rpb2, domain 6 BN117_0014 PF04565 RNA polymerase Rpb2, domain 3 BN117_0014 PF04560 RNA polymerase Rpb2, domain 7 BN117_0014 PF10385 RNA polymerase beta subunit external 1 domain BN117_0014 PF04561 RNA polymerase Rpb2, domain 2 BN117_0014 PF04563 RNA polymerase beta subunit BN117_0015 PF05000 RNA polymerase Rpb1, domain 4 BN117_0015 PF04997 RNA polymerase Rpb1, domain 1 BN117_0015 PF04998 RNA polymerase Rpb1, domain 5 BN117_0015 PF04983 RNA polymerase Rpb1, domain 3 BN117_0015 PF00623 RNA polymerase Rpb1, domain 2 BN117_0020 PF00072 Response regulator receiver domain BN117_0020 PF00486 Transcriptional regulatory protein, C terminal BN117_0021 PF00072 Response regulator receiver domain BN117_0021 PF00486 Transcriptional regulatory protein, C terminal BN117_0022 PF01545 Cation efflux family BN117_0023 PF02583 Metal-sensitive transcriptional repressor BN117_0024 PF00164 Ribosomal protein S12/S23 BN117_0025 PF00177 Ribosomal protein S7p/S5e BN117_0026 PF00679 Elongation factor G C-terminus BN117_0026 PF03764 Elongation factor G, domain IV BN117_0026 PF00009 Elongation factor Tu GTP binding domain BN117_0026 PF14492 Elongation Factor G, domain II BN117_0026 PF03144 Elongation factor Tu domain 2 BN117_0027 PF00009 Elongation factor Tu GTP binding domain BN117_0027 PF03144 Elongation factor Tu domain 2 BN117_0027 PF03143 Elongation factor Tu C-terminal domain BN117_0028 PF00338 Ribosomal protein S10p/S20e BN117_0029 PF00297 Ribosomal protein L3 BN117_0030 PF00573 Ribosomal protein L4/L1 family BN117_0031 PF00276 Ribosomal protein L23 BN117_0032 PF00181 Ribosomal Proteins L2, RNA binding domain BN117_0032 PF03947 Ribosomal Proteins L2, C-terminal domain BN117_0033 PF00203 Ribosomal protein S19 BN117_0034 PF00237 Ribosomal protein L22p/L17e BN117_0035 PF00189 Ribosomal protein S3, C-terminal domain BN117_0035 PF07650 KH domain BN117_0036 PF00252 Ribosomal protein L16p/L10e BN117_0037 PF00831 Ribosomal L29 protein BN117_0038 PF00366 Ribosomal protein S17 BN117_0040 PF00171 Aldehyde dehydrogenase family BN117_0041 PF00238 Ribosomal protein L14p/L23e BN117_0042 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BN117_0043 PF00281 Ribosomal protein L5 BN117_0043 PF00673 ribosomal L5P family C-terminus BN117_0044 PF00253 Ribosomal protein S14p/S29e BN117_0045 PF00410 Ribosomal protein S8 BN117_0046 PF00347 Ribosomal protein L6 BN117_0047 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BN117_0048 PF00333 Ribosomal protein S5, N-terminal domain BN117_0048 PF03719 Ribosomal protein S5, C-terminal domain BN117_0049 PF00327 Ribosomal protein L30p/L7e BN117_0050 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BN117_0051 PF00344 SecY translocase BN117_0052 PF01176 Translation initiation factor 1A / IF-1 BN117_0053 PF00444 Ribosomal protein L36 BN117_0054 PF00416 Ribosomal protein S13/S18 BN117_0055 PF00411 Ribosomal protein S11 BN117_0056 PF00163 Ribosomal protein S4/S9 N-terminal domain BN117_0056 PF01479 S4 domain BN117_0057 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BN117_0057 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BN117_0057 PF01000 RNA polymerase Rpb3/RpoA insert domain BN117_0058 PF01196 Ribosomal protein L17 BN117_0059 PF01230 HIT domain BN117_0060 PF03091 CutA1 divalent ion tolerance protein BN117_0061 PF02683 Cytochrome C biogenesis protein transmembrane region BN117_0061 PF11412 Disulphide bond corrector protein DsbC BN117_0062 PF00892 EamA-like transporter family BN117_0063 PF00490 Delta-aminolevulinic acid dehydratase BN117_0064 PF01926 50S ribosome-binding GTPase BN117_0065 PF00034 Cytochrome c BN117_0066 PF05140 ResB-like family BN117_0067 PF01578 Cytochrome C assembly protein BN117_0068 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BN117_0068 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BN117_0069 PF01491 Frataxin-like domain BN117_0070 PF00905 Penicillin binding protein transpeptidase domain BN117_0070 PF00912 Transglycosylase BN117_0070 PF17092 Penicillin-binding protein OB-like domain BN117_0071 PF01202 Shikimate kinase BN117_0072 PF01761 3-dehydroquinate synthase BN117_0073 PF01966 HD domain BN117_0073 PF13286 Phosphohydrolase-associated domain BN117_0074 PF13417 Glutathione S-transferase, N-terminal domain BN117_0074 PF00043 Glutathione S-transferase, C-terminal domain BN117_0075 PF17755 UvrA DNA-binding domain BN117_0075 PF17760 UvrA interaction domain BN117_0076 PF07690 Major Facilitator Superfamily BN117_0077 PF00436 Single-strand binding protein family BN117_0078 PF00593 TonB dependent receptor BN117_0078 PF07715 TonB-dependent Receptor Plug Domain BN117_0080 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_0081 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0083 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0083 PF03466 LysR substrate binding domain BN117_0084 PF01979 Amidohydrolase family BN117_0085 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0088 PF03466 LysR substrate binding domain BN117_0088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0090 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0091 PF00005 ABC transporter BN117_0095 PF01274 Malate synthase BN117_0096 PF07729 FCD domain BN117_0096 PF00392 Bacterial regulatory proteins, gntR family BN117_0099 PF01040 UbiA prenyltransferase family BN117_0101 PF13185 GAF domain BN117_0102 PF00701 Dihydrodipicolinate synthetase family BN117_0110 PF00732 GMC oxidoreductase BN117_0110 PF05199 GMC oxidoreductase BN117_0114 PF01336 OB-fold nucleic acid binding domain BN117_0114 PF00152 tRNA synthetases class II (D, K and N) BN117_0114 PF02938 GAD domain BN117_0115 PF03372 Endonuclease/Exonuclease/phosphatase family BN117_0116 PF13091 PLD-like domain BN117_0120 PF16363 GDP-mannose 4,6 dehydratase BN117_0121 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BN117_0122 PF00733 Asparagine synthase BN117_0122 PF13537 Glutamine amidotransferase domain BN117_0123 PF00551 Formyl transferase BN117_0123 PF02911 Formyl transferase, C-terminal domain BN117_0126 PF00551 Formyl transferase BN117_0126 PF02911 Formyl transferase, C-terminal domain BN117_0127 PF02911 Formyl transferase, C-terminal domain BN117_0127 PF00551 Formyl transferase BN117_0130 PF14524 Wzt C-terminal domain BN117_0130 PF00005 ABC transporter BN117_0131 PF00005 ABC transporter BN117_0131 PF14524 Wzt C-terminal domain BN117_0136 PF16363 GDP-mannose 4,6 dehydratase BN117_0137 PF01370 NAD dependent epimerase/dehydratase family BN117_0138 PF16363 GDP-mannose 4,6 dehydratase BN117_0140 PF00733 Asparagine synthase BN117_0140 PF13537 Glutamine amidotransferase domain BN117_0142 PF00534 Glycosyl transferases group 1 BN117_0142 PF13439 Glycosyltransferase Family 4 BN117_0143 PF02719 Polysaccharide biosynthesis protein BN117_0145 PF10997 Alternate to MurJ BN117_0147 PF02397 Bacterial sugar transferase BN117_0148 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BN117_0150 PF02350 UDP-N-acetylglucosamine 2-epimerase BN117_0151 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BN117_0152 PF00132 Bacterial transferase hexapeptide (six repeats) BN117_0153 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN117_0153 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN117_0154 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BN117_0155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BN117_0155 PF00534 Glycosyl transferases group 1 BN117_0158 PF03309 Type III pantothenate kinase BN117_0160 PF02405 Permease MlaE BN117_0161 PF00005 ABC transporter BN117_0165 PF00768 D-alanyl-D-alanine carboxypeptidase BN117_0165 PF07943 Penicillin-binding protein 5, C-terminal domain BN117_0166 PF01063 Amino-transferase class IV BN117_0167 PF04359 Protein of unknown function (DUF493) BN117_0168 PF03099 Biotin/lipoate A/B protein ligase family BN117_0169 PF04055 Radical SAM superfamily BN117_0169 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BN117_0170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BN117_0171 PF04321 RmlD substrate binding domain BN117_0172 PF16363 GDP-mannose 4,6 dehydratase BN117_0173 PF01923 Cobalamin adenosyltransferase BN117_0175 PF00004 ATPase family associated with various cellular activities (AAA) BN117_0175 PF07724 AAA domain (Cdc48 subfamily) BN117_0175 PF10431 C-terminal, D2-small domain, of ClpB protein BN117_0176 PF00227 Proteasome subunit BN117_0177 PF01258 Prokaryotic dksA/traR C4-type zinc finger BN117_0178 PF02492 CobW/HypB/UreG, nucleotide-binding domain BN117_0178 PF07683 Cobalamin synthesis protein cobW C-terminal domain BN117_0179 PF01475 Ferric uptake regulator family BN117_0180 PF00005 ABC transporter BN117_0181 PF00950 ABC 3 transport family BN117_0182 PF01297 Zinc-uptake complex component A periplasmic BN117_0184 PF03824 High-affinity nickel-transport protein BN117_0185 PF07715 TonB-dependent Receptor Plug Domain BN117_0185 PF00593 TonB dependent receptor BN117_0186 PF02899 Phage integrase, N-terminal SAM-like domain BN117_0186 PF00589 Phage integrase family BN117_0188 PF01678 Diaminopimelate epimerase BN117_0189 PF03279 Bacterial lipid A biosynthesis acyltransferase BN117_0191 PF02773 S-adenosylmethionine synthetase, C-terminal domain BN117_0191 PF00438 S-adenosylmethionine synthetase, N-terminal domain BN117_0191 PF02772 S-adenosylmethionine synthetase, central domain BN117_0193 PF13439 Glycosyltransferase Family 4 BN117_0193 PF00534 Glycosyl transferases group 1 BN117_0194 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BN117_0194 PF05221 S-adenosyl-L-homocysteine hydrolase BN117_0195 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BN117_0196 PF02219 Methylenetetrahydrofolate reductase BN117_0197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0197 PF03466 LysR substrate binding domain BN117_0198 PF00850 Histone deacetylase domain BN117_0199 PF07690 Major Facilitator Superfamily BN117_0199 PF00083 Sugar (and other) transporter BN117_0201 PF01464 Transglycosylase SLT domain BN117_0201 PF14718 Soluble lytic murein transglycosylase L domain BN117_0202 PF12627 Probable RNA and SrmB- binding site of polymerase A BN117_0202 PF01743 Poly A polymerase head domain BN117_0204 PF00270 DEAD/DEAH box helicase BN117_0204 PF00271 Helicase conserved C-terminal domain BN117_0205 PF03167 Uracil DNA glycosylase superfamily BN117_0206 PF13419 Haloacid dehalogenase-like hydrolase BN117_0207 PF01048 Phosphorylase superfamily BN117_0210 PF01475 Ferric uptake regulator family BN117_0212 PF06965 Na+/H+ antiporter 1 BN117_0214 PF13439 Glycosyltransferase Family 4 BN117_0214 PF00534 Glycosyl transferases group 1 BN117_0217 PF03976 Polyphosphate kinase 2 (PPK2) BN117_0218 PF00753 Metallo-beta-lactamase superfamily BN117_0220 PF04143 Sulphur transport BN117_0222 PF00501 AMP-binding enzyme BN117_0222 PF14535 AMP-binding enzyme C-terminal domain BN117_0223 PF00005 ABC transporter BN117_0226 PF02653 Branched-chain amino acid transport system / permease component BN117_0227 PF00005 ABC transporter BN117_0227 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_0228 PF00501 AMP-binding enzyme BN117_0230 PF01810 LysE type translocator BN117_0231 PF03466 LysR substrate binding domain BN117_0231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0233 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0234 PF01168 Alanine racemase, N-terminal domain BN117_0235 PF00155 Aminotransferase class I and II BN117_0236 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_0238 PF00682 HMGL-like BN117_0239 PF02481 DNA recombination-mediator protein A BN117_0239 PF17782 DprA winged helix domain BN117_0240 PF01037 Lrp/AsnC ligand binding domain BN117_0241 PF00266 Aminotransferase class-V BN117_0242 PF01327 Polypeptide deformylase BN117_0243 PF00551 Formyl transferase BN117_0243 PF02911 Formyl transferase, C-terminal domain BN117_0245 PF13419 Haloacid dehalogenase-like hydrolase BN117_0247 PF03641 Possible lysine decarboxylase BN117_0249 PF04055 Radical SAM superfamily BN117_0249 PF18693 TRAM domain BN117_0249 PF00919 Uncharacterized protein family UPF0004 BN117_0250 PF01361 Tautomerase enzyme BN117_0251 PF01266 FAD dependent oxidoreductase BN117_0252 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0253 PF07729 FCD domain BN117_0253 PF00392 Bacterial regulatory proteins, gntR family BN117_0255 PF01958 Domain of unknown function DUF108 BN117_0255 PF03447 Homoserine dehydrogenase, NAD binding domain BN117_0257 PF01029 NusB family BN117_0257 PF01189 16S rRNA methyltransferase RsmB/F BN117_0259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_0259 PF00672 HAMP domain BN117_0259 PF00989 PAS fold BN117_0259 PF00512 His Kinase A (phospho-acceptor) domain BN117_0260 PF00158 Sigma-54 interaction domain BN117_0260 PF00072 Response regulator receiver domain BN117_0260 PF02954 Bacterial regulatory protein, Fis family BN117_0261 PF02254 TrkA-N domain BN117_0261 PF02080 TrkA-C domain BN117_0262 PF02386 Cation transport protein BN117_0263 PF01047 MarR family BN117_0265 PF12804 MobA-like NTP transferase domain BN117_0267 PF17645 Arylmalonate decarboxylase BN117_0268 PF00561 alpha/beta hydrolase fold BN117_0270 PF00857 Isochorismatase family BN117_0272 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BN117_0272 PF00355 Rieske [2Fe-2S] domain BN117_0273 PF14759 Reductase C-terminal BN117_0273 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_0274 PF00355 Rieske [2Fe-2S] domain BN117_0275 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_0277 PF03450 CO dehydrogenase flavoprotein C-terminal domain BN117_0277 PF00941 FAD binding domain in molybdopterin dehydrogenase BN117_0278 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_0278 PF01799 [2Fe-2S] binding domain BN117_0280 PF00005 ABC transporter BN117_0281 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0283 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_0284 PF04107 Glutamate-cysteine ligase family 2(GCS2) BN117_0285 PF08241 Methyltransferase domain BN117_0287 PF00588 SpoU rRNA Methylase family BN117_0288 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0289 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BN117_0289 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BN117_0290 PF02556 Preprotein translocase subunit SecB BN117_0291 PF00462 Glutaredoxin BN117_0292 PF17773 UPF0176 acylphosphatase like domain BN117_0292 PF12368 Rhodanase C-terminal BN117_0292 PF00581 Rhodanese-like domain BN117_0293 PF00300 Histidine phosphatase superfamily (branch 1) BN117_0294 PF01551 Peptidase family M23 BN117_0295 PF13180 PDZ domain BN117_0295 PF03572 Peptidase family S41 BN117_0296 PF00899 ThiF family BN117_0298 PF02913 FAD linked oxidases, C-terminal domain BN117_0298 PF01565 FAD binding domain BN117_0299 PF01964 Radical SAM ThiC family BN117_0299 PF13667 ThiC-associated domain BN117_0300 PF07549 SecD/SecF GG Motif BN117_0300 PF02355 Protein export membrane protein BN117_0301 PF09518 HindIII restriction endonuclease BN117_0305 PF01472 PUA domain BN117_0305 PF00696 Amino acid kinase family BN117_0306 PF01926 50S ribosome-binding GTPase BN117_0306 PF01018 GTP1/OBG BN117_0307 PF01016 Ribosomal L27 protein BN117_0308 PF00829 Ribosomal prokaryotic L21 protein BN117_0310 PF00348 Polyprenyl synthetase BN117_0311 PF03466 LysR substrate binding domain BN117_0311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0312 PF05378 Hydantoinase/oxoprolinase N-terminal region BN117_0312 PF01968 Hydantoinase/oxoprolinase BN117_0314 PF01266 FAD dependent oxidoreductase BN117_0315 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0316 PF00171 Aldehyde dehydrogenase family BN117_0317 PF02794 RTX toxin acyltransferase family BN117_0318 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BN117_0318 PF02382 N-terminal domain in RTX protein BN117_0318 PF06594 Haemolysin-type calcium binding protein related domain BN117_0318 PF03497 Anthrax toxin LF subunit BN117_0319 PF00664 ABC transporter transmembrane region BN117_0319 PF00005 ABC transporter BN117_0319 PF03412 Peptidase C39 family BN117_0320 PF13533 Biotin-lipoyl like BN117_0321 PF02321 Outer membrane efflux protein BN117_0323 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_0324 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0325 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0326 PF00005 ABC transporter BN117_0327 PF01063 Amino-transferase class IV BN117_0332 PF07729 FCD domain BN117_0332 PF00392 Bacterial regulatory proteins, gntR family BN117_0335 PF07729 FCD domain BN117_0335 PF00392 Bacterial regulatory proteins, gntR family BN117_0336 PF08240 Alcohol dehydrogenase GroES-like domain BN117_0336 PF00107 Zinc-binding dehydrogenase BN117_0337 PF00501 AMP-binding enzyme BN117_0337 PF13193 AMP-binding enzyme C-terminal domain BN117_0339 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0340 PF00005 ABC transporter BN117_0341 PF09084 NMT1/THI5 like BN117_0343 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_0343 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_0343 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_0345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0345 PF03466 LysR substrate binding domain BN117_0346 PF02515 CoA-transferase family III BN117_0347 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_0348 PF07702 UTRA domain BN117_0348 PF00392 Bacterial regulatory proteins, gntR family BN117_0351 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0355 PF01144 Coenzyme A transferase BN117_0356 PF01144 Coenzyme A transferase BN117_0357 PF03466 LysR substrate binding domain BN117_0357 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0358 PF00378 Enoyl-CoA hydratase/isomerase BN117_0359 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN117_0359 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BN117_0361 PF02653 Branched-chain amino acid transport system / permease component BN117_0363 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_0363 PF00005 ABC transporter BN117_0364 PF00005 ABC transporter BN117_0368 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN117_0371 PF01970 Tripartite tricarboxylate transporter TctA family BN117_0373 PF00486 Transcriptional regulatory protein, C terminal BN117_0373 PF00072 Response regulator receiver domain BN117_0378 PF01488 Shikimate / quinate 5-dehydrogenase BN117_0378 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BN117_0378 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BN117_0379 PF03462 PCRF domain BN117_0379 PF00472 RF-1 domain BN117_0380 PF05175 Methyltransferase small domain BN117_0380 PF17827 PrmC N-terminal domain BN117_0381 PF00462 Glutaredoxin BN117_0382 PF02441 Flavoprotein BN117_0383 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0384 PF09084 NMT1/THI5 like BN117_0385 PF00941 FAD binding domain in molybdopterin dehydrogenase BN117_0385 PF03450 CO dehydrogenase flavoprotein C-terminal domain BN117_0386 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_0386 PF01799 [2Fe-2S] binding domain BN117_0387 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BN117_0387 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BN117_0390 PF03180 NLPA lipoprotein BN117_0392 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BN117_0392 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BN117_0394 PF00005 ABC transporter BN117_0395 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_0395 PF00005 ABC transporter BN117_0396 PF02653 Branched-chain amino acid transport system / permease component BN117_0397 PF02653 Branched-chain amino acid transport system / permease component BN117_0398 PF03466 LysR substrate binding domain BN117_0398 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0399 PF13458 Periplasmic binding protein BN117_0400 PF01425 Amidase BN117_0401 PF00484 Carbonic anhydrase BN117_0405 PF12146 Serine aminopeptidase, S33 BN117_0407 PF02426 Muconolactone delta-isomerase BN117_0408 PF01144 Coenzyme A transferase BN117_0409 PF01144 Coenzyme A transferase BN117_0410 PF09339 IclR helix-turn-helix domain BN117_0410 PF01614 Bacterial transcriptional regulator BN117_0412 PF02667 Short chain fatty acid transporter BN117_0414 PF03797 Autotransporter beta-domain BN117_0414 PF00082 Subtilase family BN117_0415 PF00311 Phosphoenolpyruvate carboxylase BN117_0416 PF06508 Queuosine biosynthesis protein QueC BN117_0419 PF04299 Putative FMN-binding domain BN117_0420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN117_0421 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_0422 PF07859 alpha/beta hydrolase fold BN117_0424 PF08502 LeuA allosteric (dimerisation) domain BN117_0424 PF00682 HMGL-like BN117_0425 PF12833 Helix-turn-helix domain BN117_0426 PF00920 Dehydratase family BN117_0427 PF01118 Semialdehyde dehydrogenase, NAD binding domain BN117_0427 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BN117_0428 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BN117_0430 PF02321 Outer membrane efflux protein BN117_0431 PF00873 AcrB/AcrD/AcrF family BN117_0432 PF13533 Biotin-lipoyl like BN117_0433 PF03466 LysR substrate binding domain BN117_0433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0434 PF01594 AI-2E family transporter BN117_0436 PF02254 TrkA-N domain BN117_0436 PF07885 Ion channel BN117_0437 PF01042 Endoribonuclease L-PSP BN117_0439 PF01145 SPFH domain / Band 7 family BN117_0440 PF07411 Domain of unknown function (DUF1508) BN117_0441 PF14031 Putative serine dehydratase domain BN117_0441 PF01168 Alanine racemase, N-terminal domain BN117_0445 PF03797 Autotransporter beta-domain BN117_0445 PF12951 Passenger-associated-transport-repeat BN117_0445 PF00082 Subtilase family BN117_0447 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0449 PF09339 IclR helix-turn-helix domain BN117_0449 PF01614 Bacterial transcriptional regulator BN117_0450 PF00378 Enoyl-CoA hydratase/isomerase BN117_0451 PF02627 Carboxymuconolactone decarboxylase family BN117_0453 PF08240 Alcohol dehydrogenase GroES-like domain BN117_0453 PF00107 Zinc-binding dehydrogenase BN117_0454 PF02515 CoA-transferase family III BN117_0457 PF02515 CoA-transferase family III BN117_0458 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0459 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0459 PF03466 LysR substrate binding domain BN117_0460 PF01042 Endoribonuclease L-PSP BN117_0462 PF02667 Short chain fatty acid transporter BN117_0463 PF00392 Bacterial regulatory proteins, gntR family BN117_0463 PF07729 FCD domain BN117_0465 PF00313 'Cold-shock' DNA-binding domain BN117_0466 PF03466 LysR substrate binding domain BN117_0466 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0468 PF12411 Choline sulfatase enzyme C terminal BN117_0468 PF00884 Sulfatase BN117_0470 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0471 PF01979 Amidohydrolase family BN117_0472 PF02492 CobW/HypB/UreG, nucleotide-binding domain BN117_0472 PF07683 Cobalamin synthesis protein cobW C-terminal domain BN117_0473 PF03033 Glycosyltransferase family 28 N-terminal domain BN117_0474 PF00440 Bacterial regulatory proteins, tetR family BN117_0474 PF16925 Tetracyclin repressor-like, C-terminal domain BN117_0491 PF00589 Phage integrase family BN117_0492 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_0492 PF00183 Hsp90 protein BN117_0493 PF00043 Glutathione S-transferase, C-terminal domain BN117_0493 PF13417 Glutathione S-transferase, N-terminal domain BN117_0494 PF01510 N-acetylmuramoyl-L-alanine amidase BN117_0496 PF01578 Cytochrome C assembly protein BN117_0497 PF02978 Signal peptide binding domain BN117_0497 PF00448 SRP54-type protein, GTPase domain BN117_0497 PF02881 SRP54-type protein, helical bundle domain BN117_0498 PF04972 BON domain BN117_0498 PF01476 LysM domain BN117_0499 PF02597 ThiS family BN117_0499 PF05690 Thiazole biosynthesis protein ThiG BN117_0500 PF00561 alpha/beta hydrolase fold BN117_0501 PF02390 Putative methyltransferase BN117_0503 PF02515 CoA-transferase family III BN117_0504 PF00682 HMGL-like BN117_0505 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0506 PF13356 Arm DNA-binding domain BN117_0506 PF00589 Phage integrase family BN117_0506 PF14659 Phage integrase, N-terminal SAM-like domain BN117_0529 PF02463 RecF/RecN/SMC N terminal domain BN117_0536 PF00149 Calcineurin-like phosphoesterase BN117_0536 PF12320 Type 5 capsule protein repressor C-terminal domain BN117_0537 PF13476 AAA domain BN117_0555 PF01131 DNA topoisomerase BN117_0555 PF01751 Toprim domain BN117_0561 PF13614 AAA domain BN117_0564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0564 PF03466 LysR substrate binding domain BN117_0566 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0566 PF03466 LysR substrate binding domain BN117_0567 PF01610 Transposase BN117_0567 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_0567 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_0568 PF09339 IclR helix-turn-helix domain BN117_0569 PF09339 IclR helix-turn-helix domain BN117_0570 PF02785 Biotin carboxylase C-terminal domain BN117_0570 PF00364 Biotin-requiring enzyme BN117_0570 PF02436 Conserved carboxylase domain BN117_0570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN117_0570 PF00682 HMGL-like BN117_0570 PF00289 Biotin carboxylase, N-terminal domain BN117_0571 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_0571 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_0571 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_0574 PF00108 Thiolase, N-terminal domain BN117_0574 PF02803 Thiolase, C-terminal domain BN117_0575 PF16177 Acetyl-coenzyme A synthetase N-terminus BN117_0575 PF00501 AMP-binding enzyme BN117_0575 PF13193 AMP-binding enzyme C-terminal domain BN117_0577 PF02515 CoA-transferase family III BN117_0578 PF03466 LysR substrate binding domain BN117_0578 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0579 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_0579 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_0579 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_0580 PF01012 Electron transfer flavoprotein domain BN117_0581 PF00766 Electron transfer flavoprotein FAD-binding domain BN117_0581 PF01012 Electron transfer flavoprotein domain BN117_0583 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0583 PF03466 LysR substrate binding domain BN117_0585 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0586 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0587 PF00440 Bacterial regulatory proteins, tetR family BN117_0587 PF17932 Tetracyclin repressor-like, C-terminal domain BN117_0589 PF00378 Enoyl-CoA hydratase/isomerase BN117_0590 PF00881 Nitroreductase family BN117_0592 PF00682 HMGL-like BN117_0593 PF00378 Enoyl-CoA hydratase/isomerase BN117_0594 PF02515 CoA-transferase family III BN117_0595 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0596 PF00465 Iron-containing alcohol dehydrogenase BN117_0597 PF00378 Enoyl-CoA hydratase/isomerase BN117_0598 PF01425 Amidase BN117_0601 PF00171 Aldehyde dehydrogenase family BN117_0602 PF03358 NADPH-dependent FMN reductase BN117_0603 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0604 PF00005 ABC transporter BN117_0607 PF09339 IclR helix-turn-helix domain BN117_0607 PF01614 Bacterial transcriptional regulator BN117_0608 PF13545 Crp-like helix-turn-helix domain BN117_0608 PF00027 Cyclic nucleotide-binding domain BN117_0610 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0613 PF01614 Bacterial transcriptional regulator BN117_0613 PF09339 IclR helix-turn-helix domain BN117_0614 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_0614 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_0614 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_0615 PF13193 AMP-binding enzyme C-terminal domain BN117_0615 PF00501 AMP-binding enzyme BN117_0619 PF00378 Enoyl-CoA hydratase/isomerase BN117_0621 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_0621 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_0621 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_0622 PF00378 Enoyl-CoA hydratase/isomerase BN117_0623 PF02803 Thiolase, C-terminal domain BN117_0623 PF00108 Thiolase, N-terminal domain BN117_0624 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0627 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0627 PF03466 LysR substrate binding domain BN117_0628 PF00561 alpha/beta hydrolase fold BN117_0631 PF00043 Glutathione S-transferase, C-terminal domain BN117_0631 PF02798 Glutathione S-transferase, N-terminal domain BN117_0632 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0633 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0634 PF00392 Bacterial regulatory proteins, gntR family BN117_0634 PF07729 FCD domain BN117_0635 PF00171 Aldehyde dehydrogenase family BN117_0640 PF02492 CobW/HypB/UreG, nucleotide-binding domain BN117_0640 PF07683 Cobalamin synthesis protein cobW C-terminal domain BN117_0644 PF00701 Dihydrodipicolinate synthetase family BN117_0645 PF00155 Aminotransferase class I and II BN117_0646 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_0647 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0648 PF00005 ABC transporter BN117_0649 PF01546 Peptidase family M20/M25/M40 BN117_0649 PF07687 Peptidase dimerisation domain BN117_0650 PF09339 IclR helix-turn-helix domain BN117_0650 PF01614 Bacterial transcriptional regulator BN117_0651 PF07687 Peptidase dimerisation domain BN117_0651 PF01546 Peptidase family M20/M25/M40 BN117_0652 PF01425 Amidase BN117_0654 PF04115 Ureidoglycolate lyase BN117_0655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_0658 PF03466 LysR substrate binding domain BN117_0658 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0664 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_0666 PF00464 Serine hydroxymethyltransferase BN117_0667 PF03594 Benzoate membrane transport protein BN117_0668 PF01799 [2Fe-2S] binding domain BN117_0668 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_0669 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BN117_0670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0670 PF03466 LysR substrate binding domain BN117_0672 PF00682 HMGL-like BN117_0673 PF02515 CoA-transferase family III BN117_0674 PF00857 Isochorismatase family BN117_0675 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0677 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_0679 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_0684 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0685 PF00970 Oxidoreductase FAD-binding domain BN117_0685 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_0685 PF00175 Oxidoreductase NAD-binding domain BN117_0686 PF00355 Rieske [2Fe-2S] domain BN117_0686 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BN117_0690 PF01494 FAD binding domain BN117_0691 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0692 PF01557 Fumarylacetoacetate (FAA) hydrolase family BN117_0693 PF01557 Fumarylacetoacetate (FAA) hydrolase family BN117_0694 PF00171 Aldehyde dehydrogenase family BN117_0695 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BN117_0697 PF01557 Fumarylacetoacetate (FAA) hydrolase family BN117_0698 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_0699 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0699 PF03466 LysR substrate binding domain BN117_0700 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0701 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_0701 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_0701 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_0702 PF00171 Aldehyde dehydrogenase family BN117_0705 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0708 PF00378 Enoyl-CoA hydratase/isomerase BN117_0710 PF02515 CoA-transferase family III BN117_0711 PF00501 AMP-binding enzyme BN117_0711 PF14535 AMP-binding enzyme C-terminal domain BN117_0712 PF00440 Bacterial regulatory proteins, tetR family BN117_0712 PF08361 MAATS-type transcriptional repressor, C-terminal region BN117_0713 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_0713 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_0713 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_0715 PF02653 Branched-chain amino acid transport system / permease component BN117_0716 PF00005 ABC transporter BN117_0717 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_0717 PF00005 ABC transporter BN117_0719 PF00106 short chain dehydrogenase BN117_0720 PF00378 Enoyl-CoA hydratase/isomerase BN117_0722 PF02803 Thiolase, C-terminal domain BN117_0722 PF00108 Thiolase, N-terminal domain BN117_0723 PF01575 MaoC like domain BN117_0725 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0733 PF00482 Type II secretion system (T2SS), protein F BN117_0734 PF00437 Type II/IV secretion system protein BN117_0735 PF01471 Putative peptidoglycan binding domain BN117_0735 PF13401 AAA domain BN117_0737 PF00263 Bacterial type II and III secretion system protein BN117_0737 PF03958 Bacterial type II/III secretion system short domain BN117_0744 PF00437 Type II/IV secretion system protein BN117_0745 PF06750 Bacterial Peptidase A24 N-terminal domain BN117_0745 PF01478 Type IV leader peptidase family BN117_0746 PF06715 Gp5 C-terminal repeat (3 copies) BN117_0746 PF04717 Type VI secretion system, phage-baseplate injector BN117_0751 PF05947 Type VI secretion system, TssF BN117_0756 PF17871 AAA lid domain BN117_0756 PF00004 ATPase family associated with various cellular activities (AAA) BN117_0756 PF07724 AAA domain (Cdc48 subfamily) BN117_0756 PF10431 C-terminal, D2-small domain, of ClpB protein BN117_0760 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BN117_0761 PF00691 OmpA family BN117_0761 PF13677 Membrane MotB of proton-channel complex MotA/MotB BN117_0762 PF06761 Intracellular multiplication and human macrophage-killing BN117_0762 PF14331 ImcF-related N-terminal domain BN117_0762 PF06744 Type VI secretion protein IcmF C-terminal BN117_0765 PF01699 Sodium/calcium exchanger protein BN117_0767 PF03797 Autotransporter beta-domain BN117_0767 PF16168 Adhesin of bacterial autotransporter system, probable stalk BN117_0767 PF13018 Extended Signal Peptide of Type V secretion system BN117_0768 PF13091 PLD-like domain BN117_0769 PF03459 TOBE domain BN117_0769 PF00005 ABC transporter BN117_0770 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0772 PF00561 alpha/beta hydrolase fold BN117_0778 PF07715 TonB-dependent Receptor Plug Domain BN117_0778 PF00593 TonB dependent receptor BN117_0780 PF00202 Aminotransferase class-III BN117_0781 PF00491 Arginase family BN117_0785 PF00581 Rhodanese-like domain BN117_0785 PF17773 UPF0176 acylphosphatase like domain BN117_0786 PF09334 tRNA synthetases class I (M) BN117_0786 PF01588 Putative tRNA binding domain BN117_0788 PF10609 NUBPL iron-transfer P-loop NTPase BN117_0791 PF00692 dUTPase BN117_0796 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BN117_0796 PF01276 Orn/Lys/Arg decarboxylase, major domain BN117_0796 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BN117_0798 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BN117_0798 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BN117_0799 PF02535 ZIP Zinc transporter BN117_0800 PF08669 Glycine cleavage T-protein C-terminal barrel domain BN117_0800 PF01571 Aminomethyltransferase folate-binding domain BN117_0801 PF01597 Glycine cleavage H-protein BN117_0802 PF02347 Glycine cleavage system P-protein BN117_0804 PF02515 CoA-transferase family III BN117_0806 PF00378 Enoyl-CoA hydratase/isomerase BN117_0809 PF07364 Metallopeptidase family M81 BN117_0809 PF07171 MlrC C-terminus BN117_0810 PF00005 ABC transporter BN117_0810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_0811 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0812 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0813 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_0814 PF00171 Aldehyde dehydrogenase family BN117_0815 PF00202 Aminotransferase class-III BN117_0816 PF00155 Aminotransferase class I and II BN117_0816 PF00392 Bacterial regulatory proteins, gntR family BN117_0817 PF00186 Dihydrofolate reductase BN117_0818 PF00303 Thymidylate synthase BN117_0820 PF03232 Ubiquinone biosynthesis protein COQ7 BN117_0821 PF00953 Glycosyl transferase family 4 BN117_0822 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BN117_0822 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BN117_0822 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BN117_0823 PF01370 NAD dependent epimerase/dehydratase family BN117_0824 PF03023 Lipid II flippase MurJ BN117_0825 PF13439 Glycosyltransferase Family 4 BN117_0825 PF00534 Glycosyl transferases group 1 BN117_0826 PF13537 Glutamine amidotransferase domain BN117_0826 PF00733 Asparagine synthase BN117_0827 PF13439 Glycosyltransferase Family 4 BN117_0827 PF00534 Glycosyl transferases group 1 BN117_0828 PF00534 Glycosyl transferases group 1 BN117_0828 PF13439 Glycosyltransferase Family 4 BN117_0829 PF00534 Glycosyl transferases group 1 BN117_0829 PF13477 Glycosyl transferase 4-like BN117_0830 PF00342 Phosphoglucose isomerase BN117_0831 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BN117_0831 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BN117_0831 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BN117_0831 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BN117_0833 PF02913 FAD linked oxidases, C-terminal domain BN117_0833 PF01565 FAD binding domain BN117_0834 PF00072 Response regulator receiver domain BN117_0834 PF00486 Transcriptional regulatory protein, C terminal BN117_0835 PF00512 His Kinase A (phospho-acceptor) domain BN117_0835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_0835 PF08521 Two-component sensor kinase N-terminal BN117_0836 PF00884 Sulfatase BN117_0838 PF04209 homogentisate 1,2-dioxygenase BN117_0839 PF03466 LysR substrate binding domain BN117_0839 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0841 PF01494 FAD binding domain BN117_0843 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BN117_0843 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BN117_0843 PF06827 Zinc finger found in FPG and IleRS BN117_0845 PF03550 Outer membrane lipoprotein LolB BN117_0846 PF08544 GHMP kinases C terminal BN117_0846 PF00288 GHMP kinases N terminal domain BN117_0847 PF14572 Phosphoribosyl synthetase-associated domain BN117_0847 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BN117_0848 PF01386 Ribosomal L25p family BN117_0848 PF14693 Ribosomal protein TL5, C-terminal domain BN117_0849 PF01195 Peptidyl-tRNA hydrolase BN117_0851 PF01926 50S ribosome-binding GTPase BN117_0851 PF06071 Protein of unknown function (DUF933) BN117_0855 PF02384 N-6 DNA Methylase BN117_0856 PF01420 Type I restriction modification DNA specificity domain BN117_0862 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0863 PF00440 Bacterial regulatory proteins, tetR family BN117_0863 PF17938 Tetracyclin repressor-like, C-terminal domain BN117_0865 PF07690 Major Facilitator Superfamily BN117_0866 PF07729 FCD domain BN117_0866 PF00392 Bacterial regulatory proteins, gntR family BN117_0867 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_0867 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_0867 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_0868 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0869 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BN117_0870 PF01515 Phosphate acetyl/butaryl transferase BN117_0870 PF00390 Malic enzyme, N-terminal domain BN117_0870 PF03949 Malic enzyme, NAD binding domain BN117_0872 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0873 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0874 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_0874 PF00005 ABC transporter BN117_0875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_0877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0877 PF03466 LysR substrate binding domain BN117_0879 PF01610 Transposase BN117_0879 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_0879 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_0881 PF01022 Bacterial regulatory protein, arsR family BN117_0884 PF03594 Benzoate membrane transport protein BN117_0885 PF00037 4Fe-4S binding domain BN117_0886 PF01467 Cytidylyltransferase-like BN117_0888 PF00448 SRP54-type protein, GTPase domain BN117_0888 PF02881 SRP54-type protein, helical bundle domain BN117_0890 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0891 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0892 PF00005 ABC transporter BN117_0896 PF00925 GTP cyclohydrolase II BN117_0896 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BN117_0897 PF00885 6,7-dimethyl-8-ribityllumazine synthase BN117_0898 PF01029 NusB family BN117_0899 PF02769 AIR synthase related protein, C-terminal domain BN117_0899 PF00586 AIR synthase related protein, N-terminal domain BN117_0900 PF04608 Phosphatidylglycerophosphatase A BN117_0901 PF18146 Damage-inducible protein CinA KH domain BN117_0901 PF02464 Competence-damaged protein BN117_0901 PF00994 Probable molybdopterin binding domain BN117_0902 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BN117_0903 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_0904 PF01219 Prokaryotic diacylglycerol kinase BN117_0905 PF03631 Virulence factor BrkB BN117_0906 PF03212 Pertactin BN117_0906 PF03797 Autotransporter beta-domain BN117_0907 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_0907 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_0907 PF01610 Transposase BN117_0908 PF01970 Tripartite tricarboxylate transporter TctA family BN117_0913 PF01790 Prolipoprotein diacylglyceryl transferase BN117_0914 PF00920 Dehydratase family BN117_0915 PF00034 Cytochrome c BN117_0916 PF01625 Peptide methionine sulfoxide reductase BN117_0917 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN117_0918 PF01037 Lrp/AsnC ligand binding domain BN117_0921 PF01546 Peptidase family M20/M25/M40 BN117_0921 PF07687 Peptidase dimerisation domain BN117_0922 PF01979 Amidohydrolase family BN117_0923 PF16326 ABC transporter C-terminal domain BN117_0923 PF00005 ABC transporter BN117_0923 PF12848 ABC transporter BN117_0924 PF02381 MraZ protein, putative antitoxin-like BN117_0925 PF01795 MraW methylase family BN117_0926 PF04999 Cell division protein FtsL BN117_0927 PF03717 Penicillin-binding Protein dimerisation domain BN117_0927 PF00905 Penicillin binding protein transpeptidase domain BN117_0928 PF08245 Mur ligase middle domain BN117_0928 PF02875 Mur ligase family, glutamate ligase domain BN117_0929 PF00953 Glycosyl transferase family 4 BN117_0930 PF02875 Mur ligase family, glutamate ligase domain BN117_0930 PF08245 Mur ligase middle domain BN117_0931 PF01098 Cell cycle protein BN117_0932 PF04101 Glycosyltransferase family 28 C-terminal domain BN117_0932 PF03033 Glycosyltransferase family 28 N-terminal domain BN117_0933 PF08245 Mur ligase middle domain BN117_0933 PF02875 Mur ligase family, glutamate ligase domain BN117_0933 PF01225 Mur ligase family, catalytic domain BN117_0934 PF07478 D-ala D-ala ligase C-terminus BN117_0934 PF01820 D-ala D-ala ligase N-terminus BN117_0935 PF08478 POTRA domain, FtsQ-type BN117_0935 PF03799 Cell division protein FtsQ BN117_0936 PF02491 SHS2 domain inserted in FTSA BN117_0937 PF12327 FtsZ family, C-terminal domain BN117_0937 PF00091 Tubulin/FtsZ family, GTPase domain BN117_0938 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BN117_0940 PF08525 Opacity-associated protein A N-terminal motif BN117_0940 PF01476 LysM domain BN117_0940 PF01551 Peptidase family M23 BN117_0941 PF02810 SEC-C motif BN117_0941 PF07517 SecA DEAD-like domain BN117_0941 PF01043 SecA preprotein cross-linking domain BN117_0941 PF07516 SecA Wing and Scaffold domain BN117_0943 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0945 PF00106 short chain dehydrogenase BN117_0946 PF01266 FAD dependent oxidoreductase BN117_0947 PF01037 Lrp/AsnC ligand binding domain BN117_0949 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP BN117_0950 PF03448 MgtE intracellular N domain BN117_0950 PF00571 CBS domain BN117_0950 PF01769 Divalent cation transporter BN117_0951 PF03061 Thioesterase superfamily BN117_0952 PF03601 Conserved hypothetical protein 698 BN117_0953 PF03466 LysR substrate binding domain BN117_0953 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_0954 PF01546 Peptidase family M20/M25/M40 BN117_0954 PF07687 Peptidase dimerisation domain BN117_0955 PF00501 AMP-binding enzyme BN117_0955 PF13193 AMP-binding enzyme C-terminal domain BN117_0956 PF00459 Inositol monophosphatase family BN117_0957 PF01266 FAD dependent oxidoreductase BN117_0957 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BN117_0958 PF01055 Glycosyl hydrolases family 31 BN117_0958 PF13802 Galactose mutarotase-like BN117_0959 PF09383 NIL domain BN117_0959 PF00005 ABC transporter BN117_0960 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0961 PF03180 NLPA lipoprotein BN117_0962 PF00465 Iron-containing alcohol dehydrogenase BN117_0966 PF07729 FCD domain BN117_0966 PF00392 Bacterial regulatory proteins, gntR family BN117_0967 PF03401 Tripartite tricarboxylate transporter family receptor BN117_0970 PF14785 Maltose transport system permease protein MalF P2 domain BN117_0970 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0971 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0972 PF00005 ABC transporter BN117_0972 PF08402 TOBE domain BN117_0973 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_0973 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN117_0974 PF01547 Bacterial extracellular solute-binding protein BN117_0976 PF00376 MerR family regulatory protein BN117_0976 PF09278 MerR, DNA binding BN117_0977 PF03352 Methyladenine glycosylase BN117_0978 PF05170 AsmA family BN117_0979 PF00440 Bacterial regulatory proteins, tetR family BN117_0986 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BN117_0986 PF00355 Rieske [2Fe-2S] domain BN117_0987 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_0987 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_0987 PF01610 Transposase BN117_0988 PF01272 Transcription elongation factor, GreA/GreB, C-term BN117_0988 PF03449 Transcription elongation factor, N-terminal BN117_0989 PF04264 YceI-like domain BN117_0990 PF07715 TonB-dependent Receptor Plug Domain BN117_0990 PF00593 TonB dependent receptor BN117_0993 PF16653 Saccharopine dehydrogenase C-terminal domain BN117_0993 PF03435 Saccharopine dehydrogenase NADP binding domain BN117_0994 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BN117_0997 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_0998 PF00528 Binding-protein-dependent transport system inner membrane component BN117_0999 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_1000 PF00005 ABC transporter BN117_1001 PF01425 Amidase BN117_1002 PF00202 Aminotransferase class-III BN117_1005 PF00691 OmpA family BN117_1005 PF04972 BON domain BN117_1006 PF01329 Pterin 4 alpha carbinolamine dehydratase BN117_1008 PF00483 Nucleotidyl transferase BN117_1009 PF01636 Phosphotransferase enzyme family BN117_1010 PF04453 LPS transport system D BN117_1011 PF09312 SurA N-terminal domain BN117_1011 PF00639 PPIC-type PPIASE domain BN117_1012 PF00398 Ribosomal RNA adenine dimethylase BN117_1013 PF02595 Glycerate kinase family BN117_1014 PF00224 Pyruvate kinase, barrel domain BN117_1014 PF02887 Pyruvate kinase, alpha/beta domain BN117_1015 PF07670 Nucleoside recognition BN117_1016 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_1016 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_1016 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_1016 PF09317 Domain of unknown function (DUF1974) BN117_1017 PF01327 Polypeptide deformylase BN117_1018 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN117_1020 PF01553 Acyltransferase BN117_1022 PF05746 DALR anticodon binding domain BN117_1022 PF02092 Glycyl-tRNA synthetase beta subunit BN117_1023 PF02091 Glycyl-tRNA synthetase alpha subunit BN117_1026 PF00694 Aconitase C-terminal domain BN117_1027 PF00330 Aconitase family (aconitate hydratase) BN117_1028 PF00392 Bacterial regulatory proteins, gntR family BN117_1028 PF07702 UTRA domain BN117_1029 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1030 PF00378 Enoyl-CoA hydratase/isomerase BN117_1034 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_1035 PF00294 pfkB family carbohydrate kinase BN117_1036 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BN117_1037 PF01743 Poly A polymerase head domain BN117_1037 PF12626 Polymerase A arginine-rich C-terminus BN117_1037 PF12627 Probable RNA and SrmB- binding site of polymerase A BN117_1039 PF00308 Bacterial dnaA protein BN117_1040 PF00586 AIR synthase related protein, N-terminal domain BN117_1040 PF02769 AIR synthase related protein, C-terminal domain BN117_1042 PF08676 MutL C terminal dimerisation domain BN117_1042 PF01119 DNA mismatch repair protein, C-terminal domain BN117_1043 PF09335 SNARE associated Golgi protein BN117_1044 PF11741 AMIN domain BN117_1044 PF01520 N-acetylmuramoyl-L-alanine amidase BN117_1045 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BN117_1046 PF00206 Lyase BN117_1046 PF10415 Fumarase C C-terminus BN117_1048 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1049 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1049 PF03466 LysR substrate binding domain BN117_1051 PF02515 CoA-transferase family III BN117_1052 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1053 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_1053 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_1053 PF18158 Adaptive response protein AidB N-terminal domain BN117_1054 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1054 PF03466 LysR substrate binding domain BN117_1055 PF00551 Formyl transferase BN117_1057 PF01613 Flavin reductase like domain BN117_1058 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BN117_1058 PF01243 Pyridoxamine 5'-phosphate oxidase BN117_1060 PF07690 Major Facilitator Superfamily BN117_1061 PF00899 ThiF family BN117_1062 PF00392 Bacterial regulatory proteins, gntR family BN117_1062 PF07702 UTRA domain BN117_1063 PF13193 AMP-binding enzyme C-terminal domain BN117_1063 PF00501 AMP-binding enzyme BN117_1064 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1066 PF01063 Amino-transferase class IV BN117_1067 PF00425 chorismate binding enzyme BN117_1067 PF04715 Anthranilate synthase component I, N terminal region BN117_1068 PF17760 UvrA interaction domain BN117_1068 PF00005 ABC transporter BN117_1068 PF17755 UvrA DNA-binding domain BN117_1070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1070 PF03466 LysR substrate binding domain BN117_1071 PF00535 Glycosyl transferase family 2 BN117_1072 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_1073 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1074 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_1074 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1075 PF00005 ABC transporter BN117_1075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_1076 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_1076 PF00005 ABC transporter BN117_1081 PF12848 ABC transporter BN117_1081 PF00005 ABC transporter BN117_1084 PF03776 Septum formation topological specificity factor MinE BN117_1085 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BN117_1086 PF05209 Septum formation inhibitor MinC, N-terminal domain BN117_1086 PF03775 Septum formation inhibitor MinC, C-terminal domain BN117_1087 PF00749 tRNA synthetases class I (E and Q), catalytic domain BN117_1087 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BN117_1090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_1090 PF13493 Domain of unknown function (DUF4118) BN117_1090 PF02702 Osmosensitive K+ channel His kinase sensor domain BN117_1091 PF00072 Response regulator receiver domain BN117_1091 PF00486 Transcriptional regulatory protein, C terminal BN117_1093 PF00271 Helicase conserved C-terminal domain BN117_1093 PF00270 DEAD/DEAH box helicase BN117_1093 PF09382 RQC domain BN117_1093 PF00570 HRDC domain BN117_1093 PF16124 RecQ zinc-binding BN117_1094 PF05496 Holliday junction DNA helicase RuvB P-loop domain BN117_1094 PF17864 RuvB AAA lid domain BN117_1094 PF05491 RuvB C-terminal winged helix domain BN117_1095 PF00291 Pyridoxal-phosphate dependent enzyme BN117_1096 PF01370 NAD dependent epimerase/dehydratase family BN117_1097 PF01330 RuvA N terminal domain BN117_1097 PF07499 RuvA, C-terminal domain BN117_1098 PF02075 Crossover junction endodeoxyribonuclease RuvC BN117_1099 PF01808 AICARFT/IMPCHase bienzyme BN117_1099 PF02142 MGS-like domain BN117_1100 PF02954 Bacterial regulatory protein, Fis family BN117_1101 PF01207 Dihydrouridine synthase (Dus) BN117_1102 PF01494 FAD binding domain BN117_1104 PF00557 Metallopeptidase family M24 BN117_1104 PF05195 Aminopeptidase P, N-terminal domain BN117_1107 PF13609 Gram-negative porin BN117_1109 PF00483 Nucleotidyl transferase BN117_1110 PF01435 Peptidase family M48 BN117_1110 PF13181 Tetratricopeptide repeat BN117_1111 PF00561 alpha/beta hydrolase fold BN117_1114 PF01063 Amino-transferase class IV BN117_1117 PF00271 Helicase conserved C-terminal domain BN117_1117 PF00270 DEAD/DEAH box helicase BN117_1120 PF00994 Probable molybdopterin binding domain BN117_1120 PF02464 Competence-damaged protein BN117_1120 PF18146 Damage-inducible protein CinA KH domain BN117_1121 PF09339 IclR helix-turn-helix domain BN117_1121 PF01614 Bacterial transcriptional regulator BN117_1123 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1125 PF01180 Dihydroorotate dehydrogenase BN117_1126 PF04376 Arginine-tRNA-protein transferase, N terminus BN117_1126 PF04377 Arginine-tRNA-protein transferase, C terminus BN117_1127 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BN117_1129 PF03466 LysR substrate binding domain BN117_1129 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1135 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1138 PF01266 FAD dependent oxidoreductase BN117_1140 PF01925 Sulfite exporter TauE/SafE BN117_1141 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BN117_1142 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_1143 PF07729 FCD domain BN117_1143 PF00392 Bacterial regulatory proteins, gntR family BN117_1144 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_1144 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BN117_1146 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_1150 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1151 PF00378 Enoyl-CoA hydratase/isomerase BN117_1153 PF01575 MaoC like domain BN117_1154 PF02515 CoA-transferase family III BN117_1155 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1156 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BN117_1156 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BN117_1157 PF02615 Malate/L-lactate dehydrogenase BN117_1158 PF03466 LysR substrate binding domain BN117_1158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1160 PF01266 FAD dependent oxidoreductase BN117_1161 PF04267 Sarcosine oxidase, delta subunit family BN117_1162 PF08669 Glycine cleavage T-protein C-terminal barrel domain BN117_1162 PF01571 Aminomethyltransferase folate-binding domain BN117_1162 PF17806 Sarcosine oxidase A3 domain BN117_1162 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_1164 PF00551 Formyl transferase BN117_1165 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1167 PF00561 alpha/beta hydrolase fold BN117_1168 PF01565 FAD binding domain BN117_1168 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BN117_1169 PF05173 Dihydrodipicolinate reductase, C-terminus BN117_1169 PF01113 Dihydrodipicolinate reductase, N-terminus BN117_1170 PF04355 SmpA / OmlA family BN117_1171 PF01475 Ferric uptake regulator family BN117_1172 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1172 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1172 PF01610 Transposase BN117_1173 PF02463 RecF/RecN/SMC N terminal domain BN117_1174 PF01513 ATP-NAD kinase BN117_1175 PF01628 HrcA protein C terminal domain BN117_1175 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BN117_1176 PF00762 Ferrochelatase BN117_1178 PF01025 GrpE BN117_1180 PF00012 Hsp70 protein BN117_1181 PF00684 DnaJ central domain BN117_1181 PF00226 DnaJ domain BN117_1181 PF01556 DnaJ C terminal domain BN117_1182 PF00675 Insulinase (Peptidase family M16) BN117_1182 PF05193 Peptidase M16 inactive domain BN117_1186 PF01434 Peptidase family M41 BN117_1186 PF00004 ATPase family associated with various cellular activities (AAA) BN117_1186 PF17862 AAA+ lid domain BN117_1187 PF00034 Cytochrome c BN117_1190 PF00180 Isocitrate/isopropylmalate dehydrogenase BN117_1193 PF00486 Transcriptional regulatory protein, C terminal BN117_1193 PF00072 Response regulator receiver domain BN117_1194 PF02702 Osmosensitive K+ channel His kinase sensor domain BN117_1194 PF00512 His Kinase A (phospho-acceptor) domain BN117_1194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_1194 PF13492 GAF domain BN117_1194 PF13493 Domain of unknown function (DUF4118) BN117_1195 PF02669 K+-transporting ATPase, c chain BN117_1197 PF03814 Potassium-transporting ATPase A subunit BN117_1199 PF00474 Sodium:solute symporter family BN117_1200 PF00893 Small Multidrug Resistance protein BN117_1201 PF00488 MutS domain V BN117_1201 PF01713 Smr domain BN117_1202 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_1203 PF01580 FtsK/SpoIIIE family BN117_1203 PF17854 FtsK alpha domain BN117_1203 PF09397 Ftsk gamma domain BN117_1203 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BN117_1204 PF03548 Outer membrane lipoprotein carrier protein LolA BN117_1205 PF00004 ATPase family associated with various cellular activities (AAA) BN117_1205 PF16193 AAA C-terminal domain BN117_1205 PF12002 MgsA AAA+ ATPase C terminal BN117_1206 PF02403 Seryl-tRNA synthetase N-terminal domain BN117_1206 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN117_1208 PF01610 Transposase BN117_1208 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1208 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1210 PF00300 Histidine phosphatase superfamily (branch 1) BN117_1211 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1211 PF03466 LysR substrate binding domain BN117_1212 PF08402 TOBE domain BN117_1212 PF00005 ABC transporter BN117_1213 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1215 PF00860 Permease family BN117_1216 PF02203 Tar ligand binding domain homologue BN117_1216 PF00672 HAMP domain BN117_1216 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BN117_1217 PF01272 Transcription elongation factor, GreA/GreB, C-term BN117_1217 PF03449 Transcription elongation factor, N-terminal BN117_1218 PF01985 CRS1 / YhbY (CRM) domain BN117_1219 PF01728 FtsJ-like methyltransferase BN117_1220 PF06480 FtsH Extracellular BN117_1220 PF17862 AAA+ lid domain BN117_1220 PF00004 ATPase family associated with various cellular activities (AAA) BN117_1220 PF01434 Peptidase family M41 BN117_1221 PF00809 Pterin binding enzyme BN117_1222 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BN117_1222 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BN117_1222 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BN117_1222 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BN117_1224 PF02541 Ppx/GppA phosphatase family BN117_1225 PF02503 Polyphosphate kinase middle domain BN117_1225 PF13089 Polyphosphate kinase N-terminal domain BN117_1225 PF17941 Polyphosphate kinase C-terminal domain 1 BN117_1225 PF13090 Polyphosphate kinase C-terminal domain 2 BN117_1226 PF12849 PBP superfamily domain BN117_1227 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1228 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1229 PF00005 ABC transporter BN117_1232 PF13618 Gluconate 2-dehydrogenase subunit 3 BN117_1233 PF00732 GMC oxidoreductase BN117_1233 PF05199 GMC oxidoreductase BN117_1237 PF00465 Iron-containing alcohol dehydrogenase BN117_1238 PF00171 Aldehyde dehydrogenase family BN117_1241 PF00005 ABC transporter BN117_1241 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_1242 PF00005 ABC transporter BN117_1243 PF02653 Branched-chain amino acid transport system / permease component BN117_1246 PF00005 ABC transporter BN117_1247 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_1247 PF00005 ABC transporter BN117_1249 PF02653 Branched-chain amino acid transport system / permease component BN117_1250 PF13458 Periplasmic binding protein BN117_1254 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1256 PF00743 Flavin-binding monooxygenase-like BN117_1257 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_1257 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_1258 PF00378 Enoyl-CoA hydratase/isomerase BN117_1259 PF02515 CoA-transferase family III BN117_1261 PF02653 Branched-chain amino acid transport system / permease component BN117_1262 PF02653 Branched-chain amino acid transport system / permease component BN117_1262 PF11862 Domain of unknown function (DUF3382) BN117_1263 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_1263 PF00005 ABC transporter BN117_1264 PF00005 ABC transporter BN117_1265 PF01425 Amidase BN117_1271 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_1272 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BN117_1273 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_1276 PF07729 FCD domain BN117_1276 PF00392 Bacterial regulatory proteins, gntR family BN117_1277 PF01037 Lrp/AsnC ligand binding domain BN117_1278 PF00291 Pyridoxal-phosphate dependent enzyme BN117_1279 PF07687 Peptidase dimerisation domain BN117_1279 PF01546 Peptidase family M20/M25/M40 BN117_1280 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_1281 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1282 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1283 PF00005 ABC transporter BN117_1285 PF00155 Aminotransferase class I and II BN117_1286 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN117_1286 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN117_1287 PF01546 Peptidase family M20/M25/M40 BN117_1287 PF07687 Peptidase dimerisation domain BN117_1288 PF17645 Arylmalonate decarboxylase BN117_1289 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_1291 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1292 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1294 PF04229 GrpB protein BN117_1295 PF00483 Nucleotidyl transferase BN117_1298 PF00106 short chain dehydrogenase BN117_1299 PF05067 Manganese containing catalase BN117_1300 PF06826 Predicted Permease Membrane Region BN117_1301 PF03466 LysR substrate binding domain BN117_1301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1304 PF01053 Cys/Met metabolism PLP-dependent enzyme BN117_1306 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1308 PF00795 Carbon-nitrogen hydrolase BN117_1309 PF00005 ABC transporter BN117_1310 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_1310 PF00005 ABC transporter BN117_1312 PF02653 Branched-chain amino acid transport system / permease component BN117_1313 PF13458 Periplasmic binding protein BN117_1316 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BN117_1318 PF00005 ABC transporter BN117_1318 PF00664 ABC transporter transmembrane region BN117_1319 PF05724 Thiopurine S-methyltransferase (TPMT) BN117_1323 PF07238 PilZ domain BN117_1323 PF07317 Flagellar regulator YcgR BN117_1325 PF00171 Aldehyde dehydrogenase family BN117_1326 PF01966 HD domain BN117_1328 PF00364 Biotin-requiring enzyme BN117_1329 PF02436 Conserved carboxylase domain BN117_1329 PF00682 HMGL-like BN117_1329 PF00364 Biotin-requiring enzyme BN117_1333 PF00392 Bacterial regulatory proteins, gntR family BN117_1333 PF07702 UTRA domain BN117_1334 PF02785 Biotin carboxylase C-terminal domain BN117_1334 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN117_1334 PF00289 Biotin carboxylase, N-terminal domain BN117_1335 PF01039 Carboxyl transferase domain BN117_1336 PF00364 Biotin-requiring enzyme BN117_1337 PF13380 CoA binding domain BN117_1337 PF13607 Succinyl-CoA ligase like flavodoxin domain BN117_1341 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_1343 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_1343 PF14759 Reductase C-terminal BN117_1345 PF01557 Fumarylacetoacetate (FAA) hydrolase family BN117_1346 PF03466 LysR substrate binding domain BN117_1346 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1347 PF00892 EamA-like transporter family BN117_1348 PF00355 Rieske [2Fe-2S] domain BN117_1349 PF01557 Fumarylacetoacetate (FAA) hydrolase family BN117_1350 PF02423 Ornithine cyclodeaminase/mu-crystallin family BN117_1352 PF13577 SnoaL-like domain BN117_1355 PF02653 Branched-chain amino acid transport system / permease component BN117_1357 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_1357 PF00005 ABC transporter BN117_1358 PF00005 ABC transporter BN117_1361 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1367 PF01042 Endoribonuclease L-PSP BN117_1368 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN117_1369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1369 PF03466 LysR substrate binding domain BN117_1374 PF00771 FHIPEP family BN117_1387 PF01514 Secretory protein of YscJ/FliF family BN117_1389 PF02108 Flagellar assembly protein FliH BN117_1390 PF18269 T3SS EscN ATPase C-terminal domain BN117_1390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN117_1390 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN117_1393 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BN117_1394 PF00813 FliP family BN117_1395 PF01313 Bacterial export proteins, family 3 BN117_1396 PF01311 Bacterial export proteins, family 1 BN117_1397 PF01312 FlhB HrpN YscU SpaS Family BN117_1399 PF00263 Bacterial type II and III secretion system protein BN117_1399 PF03958 Bacterial type II/III secretion system short domain BN117_1400 PF04542 Sigma-70 region 2 BN117_1400 PF08281 Sigma-70, region 4 BN117_1404 PF00672 HAMP domain BN117_1404 PF07228 Stage II sporulation protein E (SpoIIE) BN117_1406 PF00842 Alanine racemase, C-terminal domain BN117_1406 PF01168 Alanine racemase, N-terminal domain BN117_1407 PF13581 Histidine kinase-like ATPase domain BN117_1408 PF01740 STAS domain BN117_1409 PF13091 PLD-like domain BN117_1409 PF13396 Phospholipase_D-nuclease N-terminal BN117_1413 PF04228 Putative neutral zinc metallopeptidase BN117_1414 PF01300 Telomere recombination BN117_1415 PF02163 Peptidase family M50 BN117_1416 PF00701 Dihydrodipicolinate synthetase family BN117_1417 PF06804 NlpB/DapX lipoprotein BN117_1418 PF16970 Type-1 fimbrial protein, A BN117_1419 PF08007 Cupin superfamily protein BN117_1420 PF05188 MutS domain II BN117_1420 PF05192 MutS domain III BN117_1420 PF00488 MutS domain V BN117_1420 PF05190 MutS family domain IV BN117_1420 PF01624 MutS domain I BN117_1421 PF07311 Dodecin BN117_1422 PF03358 NADPH-dependent FMN reductase BN117_1428 PF00924 Mechanosensitive ion channel BN117_1428 PF05552 Conserved TM helix BN117_1429 PF09339 IclR helix-turn-helix domain BN117_1429 PF01614 Bacterial transcriptional regulator BN117_1430 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1431 PF00588 SpoU rRNA Methylase family BN117_1432 PF00459 Inositol monophosphatase family BN117_1433 PF03471 Transporter associated domain BN117_1433 PF03741 Integral membrane protein TerC family BN117_1434 PF02673 Bacitracin resistance protein BacA BN117_1435 PF00149 Calcineurin-like phosphoesterase BN117_1436 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BN117_1438 PF09190 DALR domain BN117_1438 PF01406 tRNA synthetases class I (C) catalytic domain BN117_1439 PF12833 Helix-turn-helix domain BN117_1439 PF02805 Metal binding domain of Ada BN117_1439 PF06029 AlkA N-terminal domain BN117_1439 PF00730 HhH-GPD superfamily base excision DNA repair protein BN117_1440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BN117_1441 PF09179 TilS substrate binding domain BN117_1441 PF01171 PP-loop family BN117_1442 PF01842 ACT domain BN117_1442 PF00696 Amino acid kinase family BN117_1442 PF13840 ACT domain BN117_1445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_1445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_1446 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_1446 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BN117_1447 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_1448 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_1449 PF00561 alpha/beta hydrolase fold BN117_1450 PF03447 Homoserine dehydrogenase, NAD binding domain BN117_1450 PF01958 Domain of unknown function DUF108 BN117_1453 PF03466 LysR substrate binding domain BN117_1453 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1456 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1457 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1458 PF00005 ABC transporter BN117_1458 PF08402 TOBE domain BN117_1459 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN117_1459 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_1460 PF01614 Bacterial transcriptional regulator BN117_1460 PF09339 IclR helix-turn-helix domain BN117_1462 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1463 PF01042 Endoribonuclease L-PSP BN117_1468 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN117_1470 PF00535 Glycosyl transferase family 2 BN117_1471 PF14883 Hypothetical glycosyl hydrolase family 13 BN117_1471 PF01522 Polysaccharide deacetylase BN117_1474 PF12802 MarR family BN117_1475 PF13458 Periplasmic binding protein BN117_1477 PF00005 ABC transporter BN117_1477 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_1478 PF00005 ABC transporter BN117_1480 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_1480 PF01799 [2Fe-2S] binding domain BN117_1481 PF01494 FAD binding domain BN117_1482 PF17645 Arylmalonate decarboxylase BN117_1483 PF00561 alpha/beta hydrolase fold BN117_1485 PF00857 Isochorismatase family BN117_1486 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BN117_1486 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BN117_1486 PF00034 Cytochrome c BN117_1488 PF07715 TonB-dependent Receptor Plug Domain BN117_1488 PF00593 TonB dependent receptor BN117_1490 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1491 PF00884 Sulfatase BN117_1491 PF16347 Domain of unknown function (DUF4976) BN117_1492 PF00501 AMP-binding enzyme BN117_1492 PF13193 AMP-binding enzyme C-terminal domain BN117_1494 PF00108 Thiolase, N-terminal domain BN117_1494 PF02803 Thiolase, C-terminal domain BN117_1495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_1495 PF00378 Enoyl-CoA hydratase/isomerase BN117_1495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_1498 PF02803 Thiolase, C-terminal domain BN117_1498 PF00108 Thiolase, N-terminal domain BN117_1499 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_1499 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_1499 PF09317 Domain of unknown function (DUF1974) BN117_1499 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_1501 PF00072 Response regulator receiver domain BN117_1501 PF00196 Bacterial regulatory proteins, luxR family BN117_1503 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BN117_1503 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BN117_1503 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BN117_1503 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BN117_1505 PF00132 Bacterial transferase hexapeptide (six repeats) BN117_1507 PF02146 Sir2 family BN117_1508 PF00459 Inositol monophosphatase family BN117_1509 PF00171 Aldehyde dehydrogenase family BN117_1510 PF00202 Aminotransferase class-III BN117_1511 PF00155 Aminotransferase class I and II BN117_1511 PF00392 Bacterial regulatory proteins, gntR family BN117_1513 PF00580 UvrD/REP helicase N-terminal domain BN117_1513 PF13361 UvrD-like helicase C-terminal domain BN117_1516 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_1517 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1518 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1518 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_1519 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_1519 PF00005 ABC transporter BN117_1520 PF01047 MarR family BN117_1523 PF03707 Bacterial signalling protein N terminal repeat BN117_1523 PF00563 EAL domain BN117_1523 PF00990 Diguanylate cyclase, GGDEF domain BN117_1529 PF13629 Pilus formation protein N terminal region BN117_1529 PF04972 BON domain BN117_1529 PF00263 Bacterial type II and III secretion system protein BN117_1531 PF00437 Type II/IV secretion system protein BN117_1537 PF00158 Sigma-54 interaction domain BN117_1537 PF02954 Bacterial regulatory protein, Fis family BN117_1537 PF00072 Response regulator receiver domain BN117_1540 PF04542 Sigma-70 region 2 BN117_1540 PF08281 Sigma-70, region 4 BN117_1542 PF00034 Cytochrome c BN117_1543 PF08207 Elongation factor P (EF-P) KOW-like domain BN117_1543 PF01132 Elongation factor P (EF-P) OB domain BN117_1543 PF09285 Elongation factor P, C-terminal BN117_1546 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BN117_1547 PF00330 Aconitase family (aconitate hydratase) BN117_1547 PF00694 Aconitase C-terminal domain BN117_1549 PF00593 TonB dependent receptor BN117_1549 PF07715 TonB-dependent Receptor Plug Domain BN117_1551 PF00691 OmpA family BN117_1558 PF00892 EamA-like transporter family BN117_1562 PF12795 Mechanosensitive ion channel porin domain BN117_1562 PF12794 Mechanosensitive ion channel inner membrane domain 1 BN117_1562 PF00924 Mechanosensitive ion channel BN117_1563 PF03466 LysR substrate binding domain BN117_1563 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1564 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BN117_1564 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BN117_1565 PF01758 Sodium Bile acid symporter family BN117_1566 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1566 PF03466 LysR substrate binding domain BN117_1570 PF00171 Aldehyde dehydrogenase family BN117_1573 PF08264 Anticodon-binding domain of tRNA BN117_1573 PF13603 Leucyl-tRNA synthetase, Domain 2 BN117_1573 PF09334 tRNA synthetases class I (M) BN117_1573 PF00133 tRNA synthetases class I (I, L, M and V) BN117_1574 PF07690 Major Facilitator Superfamily BN117_1577 PF01740 STAS domain BN117_1577 PF00916 Sulfate permease family BN117_1578 PF00471 Ribosomal protein L33 BN117_1579 PF00830 Ribosomal L28 family BN117_1580 PF07690 Major Facilitator Superfamily BN117_1583 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1584 PF00571 CBS domain BN117_1584 PF00005 ABC transporter BN117_1585 PF01361 Tautomerase enzyme BN117_1586 PF02803 Thiolase, C-terminal domain BN117_1586 PF00108 Thiolase, N-terminal domain BN117_1588 PF00392 Bacterial regulatory proteins, gntR family BN117_1588 PF07729 FCD domain BN117_1590 PF00378 Enoyl-CoA hydratase/isomerase BN117_1591 PF13193 AMP-binding enzyme C-terminal domain BN117_1591 PF00501 AMP-binding enzyme BN117_1592 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1593 PF00080 Copper/zinc superoxide dismutase (SODC) BN117_1596 PF00005 ABC transporter BN117_1597 PF03459 TOBE domain BN117_1597 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1600 PF01610 Transposase BN117_1600 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1600 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1601 PF12167 Arm DNA-binding domain BN117_1601 PF00589 Phage integrase family BN117_1607 PF03837 RecT family BN117_1639 PF01464 Transglycosylase SLT domain BN117_1639 PF10145 Phage-related minor tail protein BN117_1639 PF01551 Peptidase family M23 BN117_1647 PF02586 SOS response associated peptidase (SRAP) BN117_1648 PF07690 Major Facilitator Superfamily BN117_1649 PF13419 Haloacid dehalogenase-like hydrolase BN117_1651 PF00691 OmpA family BN117_1652 PF03989 DNA gyrase C-terminal domain, beta-propeller BN117_1652 PF00521 DNA gyrase/topoisomerase IV, subunit A BN117_1653 PF00266 Aminotransferase class-V BN117_1654 PF00800 Prephenate dehydratase BN117_1654 PF01842 ACT domain BN117_1654 PF01817 Chorismate mutase type II BN117_1655 PF02153 Prephenate dehydrogenase BN117_1656 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BN117_1657 PF02224 Cytidylate kinase BN117_1658 PF00575 S1 RNA binding domain BN117_1659 PF00216 Bacterial DNA-binding protein BN117_1661 PF18073 Rubredoxin metal binding domain BN117_1662 PF00294 pfkB family carbohydrate kinase BN117_1663 PF01370 NAD dependent epimerase/dehydratase family BN117_1664 PF10531 SLBB domain BN117_1665 PF00291 Pyridoxal-phosphate dependent enzyme BN117_1666 PF13406 Transglycosylase SLT domain BN117_1667 PF00850 Histone deacetylase domain BN117_1668 PF01012 Electron transfer flavoprotein domain BN117_1669 PF01012 Electron transfer flavoprotein domain BN117_1669 PF00766 Electron transfer flavoprotein FAD-binding domain BN117_1670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_1670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_1670 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_1670 PF12806 Acetyl-CoA dehydrogenase C-terminal like BN117_1671 PF00578 AhpC/TSA family BN117_1671 PF10417 C-terminal domain of 1-Cys peroxiredoxin BN117_1673 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1674 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1675 PF12857 TOBE-like domain BN117_1675 PF17850 CysA C-terminal regulatory domain BN117_1675 PF00005 ABC transporter BN117_1676 PF01507 Phosphoadenosine phosphosulfate reductase family BN117_1677 PF01507 Phosphoadenosine phosphosulfate reductase family BN117_1678 PF00009 Elongation factor Tu GTP binding domain BN117_1679 PF04055 Radical SAM superfamily BN117_1682 PF01245 Ribosomal protein L19 BN117_1683 PF00293 NUDIX domain BN117_1684 PF00248 Aldo/keto reductase family BN117_1685 PF03193 RsgA GTPase BN117_1686 PF01435 Peptidase family M48 BN117_1687 PF00929 Exonuclease BN117_1688 PF03853 YjeF-related protein N-terminus BN117_1689 PF07848 PaaX-like protein BN117_1689 PF08223 PaaX-like protein C-terminal domain BN117_1691 PF06243 Phenylacetic acid degradation B BN117_1692 PF05138 Phenylacetic acid catabolic protein BN117_1693 PF01883 Iron-sulfur cluster assembly protein BN117_1694 PF00970 Oxidoreductase FAD-binding domain BN117_1694 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_1694 PF00175 Oxidoreductase NAD-binding domain BN117_1695 PF00171 Aldehyde dehydrogenase family BN117_1696 PF00378 Enoyl-CoA hydratase/isomerase BN117_1697 PF03061 Thioesterase superfamily BN117_1698 PF00501 AMP-binding enzyme BN117_1698 PF14535 AMP-binding enzyme C-terminal domain BN117_1699 PF16970 Type-1 fimbrial protein, A BN117_1700 PF16970 Type-1 fimbrial protein, A BN117_1701 PF16970 Type-1 fimbrial protein, A BN117_1703 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BN117_1703 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_1705 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_1709 PF13416 Bacterial extracellular solute-binding protein BN117_1710 PF08402 TOBE domain BN117_1710 PF00005 ABC transporter BN117_1711 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1712 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1714 PF02245 Methylpurine-DNA glycosylase (MPG) BN117_1716 PF02646 RmuC family BN117_1717 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_1717 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_1717 PF18158 Adaptive response protein AidB N-terminal domain BN117_1718 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BN117_1719 PF01895 PhoU domain BN117_1721 PF04362 Bacterial Fe(2+) trafficking BN117_1722 PF00696 Amino acid kinase family BN117_1722 PF00583 Acetyltransferase (GNAT) family BN117_1723 PF11898 Domain of unknown function (DUF3418) BN117_1723 PF00271 Helicase conserved C-terminal domain BN117_1723 PF00270 DEAD/DEAH box helicase BN117_1723 PF04408 Helicase associated domain (HA2) BN117_1723 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BN117_1725 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN117_1725 PF14579 Helix-hairpin-helix motif BN117_1725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN117_1725 PF02811 PHP domain BN117_1725 PF01336 OB-fold nucleic acid binding domain BN117_1726 PF00534 Glycosyl transferases group 1 BN117_1726 PF13439 Glycosyltransferase Family 4 BN117_1727 PF01522 Polysaccharide deacetylase BN117_1728 PF00535 Glycosyl transferase family 2 BN117_1729 PF00534 Glycosyl transferases group 1 BN117_1729 PF13439 Glycosyltransferase Family 4 BN117_1730 PF00884 Sulfatase BN117_1733 PF03692 Putative zinc- or iron-chelating domain BN117_1735 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BN117_1736 PF00664 ABC transporter transmembrane region BN117_1736 PF00005 ABC transporter BN117_1737 PF07690 Major Facilitator Superfamily BN117_1739 PF01842 ACT domain BN117_1739 PF00800 Prephenate dehydratase BN117_1740 PF10150 Ribonuclease E/G family BN117_1740 PF00575 S1 RNA binding domain BN117_1742 PF02545 Maf-like protein BN117_1743 PF02590 Predicted SPOUT methyltransferase BN117_1745 PF01467 Cytidylyltransferase-like BN117_1746 PF01218 Coproporphyrinogen III oxidase BN117_1747 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BN117_1747 PF02844 Phosphoribosylglycinamide synthetase, N domain BN117_1747 PF02843 Phosphoribosylglycinamide synthetase, C domain BN117_1748 PF01709 Transcriptional regulator BN117_1749 PF05872 Bacterial protein of unknown function (DUF853) BN117_1750 PF00202 Aminotransferase class-III BN117_1752 PF00171 Aldehyde dehydrogenase family BN117_1754 PF07687 Peptidase dimerisation domain BN117_1754 PF01546 Peptidase family M20/M25/M40 BN117_1755 PF00850 Histone deacetylase domain BN117_1756 PF07883 Cupin domain BN117_1757 PF00202 Aminotransferase class-III BN117_1758 PF00005 ABC transporter BN117_1758 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_1759 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1759 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_1760 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1761 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_1762 PF00392 Bacterial regulatory proteins, gntR family BN117_1762 PF00155 Aminotransferase class I and II BN117_1763 PF00180 Isocitrate/isopropylmalate dehydrogenase BN117_1764 PF07690 Major Facilitator Superfamily BN117_1765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BN117_1765 PF00529 HlyD membrane-fusion protein of T1SS BN117_1766 PF02321 Outer membrane efflux protein BN117_1767 PF01047 MarR family BN117_1769 PF00892 EamA-like transporter family BN117_1770 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1770 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1770 PF01610 Transposase BN117_1771 PF00107 Zinc-binding dehydrogenase BN117_1771 PF08240 Alcohol dehydrogenase GroES-like domain BN117_1772 PF01435 Peptidase family M48 BN117_1774 PF00581 Rhodanese-like domain BN117_1776 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1776 PF03466 LysR substrate binding domain BN117_1777 PF08402 TOBE domain BN117_1777 PF00005 ABC transporter BN117_1778 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1779 PF13419 Haloacid dehalogenase-like hydrolase BN117_1785 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1787 PF02609 Exonuclease VII small subunit BN117_1788 PF00348 Polyprenyl synthetase BN117_1789 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BN117_1789 PF02779 Transketolase, pyrimidine binding domain BN117_1789 PF02780 Transketolase, C-terminal domain BN117_1790 PF02649 Type I GTP cyclohydrolase folE2 BN117_1791 PF01250 Ribosomal protein S6 BN117_1793 PF01084 Ribosomal protein S18 BN117_1794 PF01281 Ribosomal protein L9, N-terminal domain BN117_1794 PF03948 Ribosomal protein L9, C-terminal domain BN117_1795 PF01610 Transposase BN117_1795 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1795 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1797 PF00772 DnaB-like helicase N terminal domain BN117_1797 PF03796 DnaB-like helicase C terminal domain BN117_1798 PF13593 SBF-like CPA transporter family (DUF4137) BN117_1799 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BN117_1800 PF13638 PIN domain BN117_1800 PF02562 PhoH-like protein BN117_1801 PF00578 AhpC/TSA family BN117_1802 PF04430 Protein of unknown function (DUF498/DUF598) BN117_1803 PF00155 Aminotransferase class I and II BN117_1804 PF01842 ACT domain BN117_1804 PF03447 Homoserine dehydrogenase, NAD binding domain BN117_1804 PF00742 Homoserine dehydrogenase BN117_1805 PF14821 Threonine synthase N terminus BN117_1805 PF00291 Pyridoxal-phosphate dependent enzyme BN117_1808 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BN117_1809 PF11940 Domain of unknown function (DUF3458) Ig-like fold BN117_1809 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BN117_1809 PF01433 Peptidase family M1 domain BN117_1811 PF00816 H-NS histone family BN117_1812 PF00795 Carbon-nitrogen hydrolase BN117_1813 PF01523 Putative modulator of DNA gyrase BN117_1814 PF00793 DAHP synthetase I family BN117_1815 PF13018 Extended Signal Peptide of Type V secretion system BN117_1815 PF05594 Haemagluttinin repeat BN117_1815 PF05860 haemagglutination activity domain BN117_1815 PF13332 Hemagglutinin repeat BN117_1815 PF13332 Hemagglutinin repeat BN117_1815 PF13018 Extended Signal Peptide of Type V secretion system BN117_1815 PF05860 haemagglutination activity domain BN117_1815 PF05594 Haemagluttinin repeat BN117_1816 PF01565 FAD binding domain BN117_1816 PF02913 FAD linked oxidases, C-terminal domain BN117_1817 PF01565 FAD binding domain BN117_1817 PF02913 FAD linked oxidases, C-terminal domain BN117_1818 PF01565 FAD binding domain BN117_1819 PF02754 Cysteine-rich domain BN117_1819 PF13183 4Fe-4S dicluster domain BN117_1820 PF00756 Putative esterase BN117_1823 PF02233 NAD(P) transhydrogenase beta subunit BN117_1824 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BN117_1825 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BN117_1825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BN117_1827 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1828 PF03466 LysR substrate binding domain BN117_1828 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1830 PF01925 Sulfite exporter TauE/SafE BN117_1831 PF00043 Glutathione S-transferase, C-terminal domain BN117_1831 PF13417 Glutathione S-transferase, N-terminal domain BN117_1832 PF08328 Adenylosuccinate lyase C-terminal BN117_1832 PF00206 Lyase BN117_1833 PF01322 Cytochrome C' BN117_1834 PF01610 Transposase BN117_1834 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1834 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1838 PF01594 AI-2E family transporter BN117_1840 PF00990 Diguanylate cyclase, GGDEF domain BN117_1841 PF00072 Response regulator receiver domain BN117_1847 PF10017 Histidine-specific methyltransferase, SAM-dependent BN117_1849 PF13091 PLD-like domain BN117_1849 PF13396 Phospholipase_D-nuclease N-terminal BN117_1850 PF01645 Conserved region in glutamate synthase BN117_1851 PF04143 Sulphur transport BN117_1852 PF03547 Membrane transport protein BN117_1853 PF13673 Acetyltransferase (GNAT) domain BN117_1855 PF08206 Ribonuclease B OB domain BN117_1855 PF00575 S1 RNA binding domain BN117_1855 PF00773 RNB domain BN117_1855 PF08461 Ribonuclease R winged-helix domain BN117_1855 PF17876 Cold shock domain BN117_1856 PF08032 RNA 2'-O ribose methyltransferase substrate binding BN117_1856 PF00588 SpoU rRNA Methylase family BN117_1857 PF01053 Cys/Met metabolism PLP-dependent enzyme BN117_1858 PF13640 2OG-Fe(II) oxygenase superfamily BN117_1858 PF18331 PKHD-type hydroxylase C-terminal domain BN117_1859 PF00216 Bacterial DNA-binding protein BN117_1861 PF01618 MotA/TolQ/ExbB proton channel family BN117_1862 PF02472 Biopolymer transport protein ExbD/TolR BN117_1863 PF00072 Response regulator receiver domain BN117_1863 PF00486 Transcriptional regulatory protein, C terminal BN117_1864 PF00512 His Kinase A (phospho-acceptor) domain BN117_1864 PF08521 Two-component sensor kinase N-terminal BN117_1864 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_1865 PF02705 K+ potassium transporter BN117_1866 PF00764 Arginosuccinate synthase BN117_1867 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BN117_1867 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BN117_1868 PF00202 Aminotransferase class-III BN117_1870 PF03466 LysR substrate binding domain BN117_1870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1872 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN117_1872 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN117_1873 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1876 PF00392 Bacterial regulatory proteins, gntR family BN117_1876 PF07729 FCD domain BN117_1877 PF02615 Malate/L-lactate dehydrogenase BN117_1878 PF00920 Dehydratase family BN117_1879 PF03401 Tripartite tricarboxylate transporter family receptor BN117_1880 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_1881 PF01649 Ribosomal protein S20 BN117_1883 PF03023 Lipid II flippase MurJ BN117_1884 PF00106 short chain dehydrogenase BN117_1885 PF05191 Adenylate kinase, active site lid BN117_1886 PF02348 Cytidylyltransferase BN117_1887 PF03966 Trm112p-like protein BN117_1888 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BN117_1890 PF01618 MotA/TolQ/ExbB proton channel family BN117_1891 PF13742 OB-fold nucleic acid binding domain BN117_1891 PF02601 Exonuclease VII, large subunit BN117_1892 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BN117_1892 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BN117_1893 PF00654 Voltage gated chloride channel BN117_1894 PF02803 Thiolase, C-terminal domain BN117_1894 PF00108 Thiolase, N-terminal domain BN117_1896 PF00313 'Cold-shock' DNA-binding domain BN117_1897 PF02617 ATP-dependent Clp protease adaptor protein ClpS BN117_1898 PF00207 Alpha-2-macroglobulin family BN117_1898 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BN117_1898 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BN117_1898 PF17962 Bacterial macroglobulin domain 6 BN117_1898 PF01835 MG2 domain BN117_1898 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BN117_1898 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BN117_1898 PF07703 Alpha-2-macroglobulin bait region domain BN117_1899 PF00912 Transglycosylase BN117_1899 PF00905 Penicillin binding protein transpeptidase domain BN117_1899 PF06832 Penicillin-Binding Protein C-terminus Family BN117_1900 PF00004 ATPase family associated with various cellular activities (AAA) BN117_1900 PF10431 C-terminal, D2-small domain, of ClpB protein BN117_1900 PF02861 Clp amino terminal domain, pathogenicity island component BN117_1900 PF17871 AAA lid domain BN117_1900 PF07724 AAA domain (Cdc48 subfamily) BN117_1901 PF04403 Paraquat-inducible protein A BN117_1902 PF02470 MlaD protein BN117_1904 PF14850 DNA-binding domain of Proline dehydrogenase BN117_1904 PF01619 Proline dehydrogenase BN117_1904 PF00171 Aldehyde dehydrogenase family BN117_1904 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BN117_1905 PF13458 Periplasmic binding protein BN117_1906 PF02653 Branched-chain amino acid transport system / permease component BN117_1907 PF11862 Domain of unknown function (DUF3382) BN117_1907 PF02653 Branched-chain amino acid transport system / permease component BN117_1908 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_1908 PF00005 ABC transporter BN117_1909 PF00005 ABC transporter BN117_1910 PF07690 Major Facilitator Superfamily BN117_1912 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1912 PF01610 Transposase BN117_1912 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1913 PF00909 Ammonium Transporter Family BN117_1914 PF00543 Nitrogen regulatory protein P-II BN117_1915 PF04380 Membrane fusogenic activity BN117_1916 PF01078 Magnesium chelatase, subunit ChlI BN117_1916 PF13335 Magnesium chelatase, subunit ChlI C-terminal BN117_1917 PF01632 Ribosomal protein L35 BN117_1918 PF00453 Ribosomal protein L20 BN117_1919 PF01409 tRNA synthetases class II core domain (F) BN117_1919 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BN117_1920 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BN117_1920 PF01588 Putative tRNA binding domain BN117_1920 PF03147 Ferredoxin-fold anticodon binding domain BN117_1920 PF03483 B3/4 domain BN117_1920 PF03484 tRNA synthetase B5 domain BN117_1921 PF00216 Bacterial DNA-binding protein BN117_1924 PF13847 Methyltransferase domain BN117_1929 PF01037 Lrp/AsnC ligand binding domain BN117_1938 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BN117_1938 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BN117_1939 PF04381 Putative exonuclease, RdgC BN117_1941 PF02515 CoA-transferase family III BN117_1942 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1942 PF03466 LysR substrate binding domain BN117_1943 PF00108 Thiolase, N-terminal domain BN117_1943 PF02803 Thiolase, C-terminal domain BN117_1946 PF00106 short chain dehydrogenase BN117_1948 PF00528 Binding-protein-dependent transport system inner membrane component BN117_1949 PF00005 ABC transporter BN117_1949 PF08402 TOBE domain BN117_1950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_1950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_1950 PF00378 Enoyl-CoA hydratase/isomerase BN117_1951 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1951 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1951 PF01610 Transposase BN117_1952 PF00083 Sugar (and other) transporter BN117_1952 PF08946 Osmosensory transporter coiled coil BN117_1953 PF00512 His Kinase A (phospho-acceptor) domain BN117_1953 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_1954 PF00072 Response regulator receiver domain BN117_1954 PF00486 Transcriptional regulatory protein, C terminal BN117_1955 PF00154 recA bacterial DNA recombination protein BN117_1956 PF02631 RecX family BN117_1957 PF03466 LysR substrate binding domain BN117_1957 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_1958 PF01717 Cobalamin-independent synthase, Catalytic domain BN117_1958 PF08267 Cobalamin-independent synthase, N-terminal domain BN117_1960 PF00549 CoA-ligase BN117_1960 PF08442 ATP-grasp domain BN117_1961 PF00549 CoA-ligase BN117_1961 PF02629 CoA binding domain BN117_1962 PF03741 Integral membrane protein TerC family BN117_1963 PF03741 Integral membrane protein TerC family BN117_1964 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BN117_1964 PF03900 Porphobilinogen deaminase, C-terminal domain BN117_1968 PF00719 Inorganic pyrophosphatase BN117_1969 PF01557 Fumarylacetoacetate (FAA) hydrolase family BN117_1971 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_1971 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_1971 PF01610 Transposase BN117_1977 PF13629 Pilus formation protein N terminal region BN117_1977 PF04972 BON domain BN117_1977 PF00263 Bacterial type II and III secretion system protein BN117_1978 PF00437 Type II/IV secretion system protein BN117_1982 PF01636 Phosphotransferase enzyme family BN117_1983 PF01207 Dihydrouridine synthase (Dus) BN117_1985 PF03631 Virulence factor BrkB BN117_1987 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BN117_1988 PF00486 Transcriptional regulatory protein, C terminal BN117_1988 PF00072 Response regulator receiver domain BN117_1989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_1989 PF00512 His Kinase A (phospho-acceptor) domain BN117_1989 PF07689 KaiB domain BN117_1990 PF13188 PAS domain BN117_1990 PF00990 Diguanylate cyclase, GGDEF domain BN117_1990 PF00563 EAL domain BN117_1990 PF03707 Bacterial signalling protein N terminal repeat BN117_1991 PF01264 Chorismate synthase BN117_1992 PF01435 Peptidase family M48 BN117_1993 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BN117_1994 PF00994 Probable molybdopterin binding domain BN117_1994 PF03454 MoeA C-terminal region (domain IV) BN117_1994 PF03453 MoeA N-terminal region (domain I and II) BN117_1995 PF12804 MobA-like NTP transferase domain BN117_1996 PF10609 NUBPL iron-transfer P-loop NTPase BN117_2002 PF13247 4Fe-4S dicluster domain BN117_2007 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2008 PF00005 ABC transporter BN117_2009 PF12849 PBP superfamily domain BN117_2010 PF00330 Aconitase family (aconitate hydratase) BN117_2011 PF00694 Aconitase C-terminal domain BN117_2012 PF00180 Isocitrate/isopropylmalate dehydrogenase BN117_2013 PF02774 Semialdehyde dehydrogenase, dimerisation domain BN117_2013 PF01118 Semialdehyde dehydrogenase, NAD binding domain BN117_2015 PF01416 tRNA pseudouridine synthase BN117_2016 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_2018 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_2019 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BN117_2023 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2025 PF00230 Major intrinsic protein BN117_2029 PF00196 Bacterial regulatory proteins, luxR family BN117_2030 PF02824 TGS domain BN117_2030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN117_2030 PF03129 Anticodon binding domain BN117_2030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN117_2031 PF05198 Translation initiation factor IF-3, N-terminal domain BN117_2031 PF00707 Translation initiation factor IF-3, C-terminal domain BN117_2032 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BN117_2032 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BN117_2034 PF00381 PTS HPr component phosphorylation site BN117_2035 PF00391 PEP-utilising enzyme, mobile domain BN117_2035 PF05524 PEP-utilising enzyme, N-terminal BN117_2035 PF02896 PEP-utilising enzyme, TIM barrel domain BN117_2037 PF02566 OsmC-like protein BN117_2038 PF02423 Ornithine cyclodeaminase/mu-crystallin family BN117_2040 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_2041 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2042 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2043 PF00005 ABC transporter BN117_2044 PF00692 dUTPase BN117_2046 PF09335 SNARE associated Golgi protein BN117_2048 PF01037 Lrp/AsnC ligand binding domain BN117_2050 PF04127 DNA / pantothenate metabolism flavoprotein BN117_2050 PF02441 Flavoprotein BN117_2051 PF01252 Signal peptidase (SPase) II BN117_2052 PF06827 Zinc finger found in FPG and IleRS BN117_2052 PF08264 Anticodon-binding domain of tRNA BN117_2052 PF00133 tRNA synthetases class I (I, L, M and V) BN117_2053 PF06574 FAD synthetase BN117_2053 PF01687 Riboflavin kinase BN117_2054 PF00551 Formyl transferase BN117_2055 PF01029 NusB family BN117_2055 PF01189 16S rRNA methyltransferase RsmB/F BN117_2058 PF13361 UvrD-like helicase C-terminal domain BN117_2058 PF00580 UvrD/REP helicase N-terminal domain BN117_2059 PF07715 TonB-dependent Receptor Plug Domain BN117_2060 PF12848 ABC transporter BN117_2060 PF00005 ABC transporter BN117_2061 PF05175 Methyltransferase small domain BN117_2062 PF01546 Peptidase family M20/M25/M40 BN117_2062 PF07687 Peptidase dimerisation domain BN117_2063 PF14602 Hexapeptide repeat of succinyl-transferase BN117_2063 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BN117_2063 PF00132 Bacterial transferase hexapeptide (six repeats) BN117_2064 PF00155 Aminotransferase class I and II BN117_2065 PF00589 Phage integrase family BN117_2072 PF03837 RecT family BN117_2108 PF06791 Prophage tail length tape measure protein BN117_2121 PF02586 SOS response associated peptidase (SRAP) BN117_2126 PF00313 'Cold-shock' DNA-binding domain BN117_2128 PF00313 'Cold-shock' DNA-binding domain BN117_2129 PF03350 Uncharacterized protein family, UPF0114 BN117_2130 PF05698 Bacterial trigger factor protein (TF) C-terminus BN117_2130 PF05697 Bacterial trigger factor protein (TF) BN117_2130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BN117_2131 PF00574 Clp protease BN117_2132 PF07724 AAA domain (Cdc48 subfamily) BN117_2132 PF10431 C-terminal, D2-small domain, of ClpB protein BN117_2132 PF06689 ClpX C4-type zinc finger BN117_2133 PF00004 ATPase family associated with various cellular activities (AAA) BN117_2133 PF05362 Lon protease (S16) C-terminal proteolytic domain BN117_2133 PF02190 ATP-dependent protease La (LON) substrate-binding domain BN117_2134 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_2134 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_2134 PF01610 Transposase BN117_2135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2135 PF03466 LysR substrate binding domain BN117_2136 PF02515 CoA-transferase family III BN117_2137 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2138 PF01575 MaoC like domain BN117_2139 PF00378 Enoyl-CoA hydratase/isomerase BN117_2141 PF00108 Thiolase, N-terminal domain BN117_2141 PF02803 Thiolase, C-terminal domain BN117_2143 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_2143 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_2143 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_2145 PF01144 Coenzyme A transferase BN117_2146 PF01144 Coenzyme A transferase BN117_2147 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2148 PF03212 Pertactin BN117_2148 PF03797 Autotransporter beta-domain BN117_2149 PF00717 Peptidase S24-like BN117_2149 PF01726 LexA DNA binding domain BN117_2150 PF00155 Aminotransferase class I and II BN117_2151 PF02151 UvrB/uvrC motif BN117_2151 PF04851 Type III restriction enzyme, res subunit BN117_2151 PF00271 Helicase conserved C-terminal domain BN117_2151 PF17757 UvrB interaction domain BN117_2151 PF12344 Ultra-violet resistance protein B BN117_2152 PF01451 Low molecular weight phosphotyrosine protein phosphatase BN117_2153 PF02082 Transcriptional regulator BN117_2154 PF00266 Aminotransferase class-V BN117_2155 PF01592 NifU-like N terminal domain BN117_2156 PF01521 Iron-sulphur cluster biosynthesis BN117_2157 PF07743 HSCB C-terminal oligomerisation domain BN117_2158 PF00012 Hsp70 protein BN117_2159 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_2160 PF04384 Iron-sulphur cluster assembly BN117_2161 PF02142 MGS-like domain BN117_2162 PF00378 Enoyl-CoA hydratase/isomerase BN117_2165 PF02653 Branched-chain amino acid transport system / permease component BN117_2165 PF11862 Domain of unknown function (DUF3382) BN117_2167 PF00005 ABC transporter BN117_2168 PF00501 AMP-binding enzyme BN117_2171 PF01336 OB-fold nucleic acid binding domain BN117_2171 PF00152 tRNA synthetases class II (D, K and N) BN117_2172 PF00106 short chain dehydrogenase BN117_2174 PF17768 RecJ OB domain BN117_2174 PF02272 DHHA1 domain BN117_2174 PF01368 DHH family BN117_2176 PF12704 MacB-like periplasmic core domain BN117_2176 PF02687 FtsX-like permease family BN117_2177 PF00005 ABC transporter BN117_2178 PF01026 TatD related DNase BN117_2182 PF13567 Domain of unknown function (DUF4131) BN117_2182 PF00753 Metallo-beta-lactamase superfamily BN117_2182 PF03772 Competence protein BN117_2184 PF02811 PHP domain BN117_2185 PF03449 Transcription elongation factor, N-terminal BN117_2185 PF01272 Transcription elongation factor, GreA/GreB, C-term BN117_2186 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_2187 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BN117_2187 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_2188 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BN117_2189 PF02769 AIR synthase related protein, C-terminal domain BN117_2189 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BN117_2189 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BN117_2190 PF13018 Extended Signal Peptide of Type V secretion system BN117_2190 PF05594 Haemagluttinin repeat BN117_2190 PF13332 Hemagglutinin repeat BN117_2190 PF05860 haemagglutination activity domain BN117_2191 PF01546 Peptidase family M20/M25/M40 BN117_2194 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2198 PF00578 AhpC/TSA family BN117_2199 PF13098 Thioredoxin-like domain BN117_2201 PF00196 Bacterial regulatory proteins, luxR family BN117_2201 PF00072 Response regulator receiver domain BN117_2204 PF00571 CBS domain BN117_2204 PF00478 IMP dehydrogenase / GMP reductase domain BN117_2205 PF00958 GMP synthase C terminal domain BN117_2205 PF00117 Glutamine amidotransferase class-I BN117_2205 PF02540 NAD synthase BN117_2206 PF00589 Phage integrase family BN117_2206 PF13356 Arm DNA-binding domain BN117_2211 PF17273 Family of unknown function (DUF5338) BN117_2225 PF10544 T5orf172 domain BN117_2227 PF17191 RecG wedge domain BN117_2227 PF00270 DEAD/DEAH box helicase BN117_2227 PF13749 Putative ATP-dependent DNA helicase recG C-terminal BN117_2231 PF00154 recA bacterial DNA recombination protein BN117_2246 PF07690 Major Facilitator Superfamily BN117_2247 PF01638 HxlR-like helix-turn-helix BN117_2249 PF07690 Major Facilitator Superfamily BN117_2252 PF03466 LysR substrate binding domain BN117_2252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2253 PF01965 DJ-1/PfpI family BN117_2254 PF01740 STAS domain BN117_2254 PF00916 Sulfate permease family BN117_2255 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BN117_2255 PF00753 Metallo-beta-lactamase superfamily BN117_2255 PF10996 Beta-Casp domain BN117_2257 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2258 PF04909 Amidohydrolase BN117_2259 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2260 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2261 PF02515 CoA-transferase family III BN117_2264 PF04909 Amidohydrolase BN117_2265 PF03972 MmgE/PrpD family BN117_2266 PF00171 Aldehyde dehydrogenase family BN117_2267 PF03466 LysR substrate binding domain BN117_2267 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2269 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2271 PF00155 Aminotransferase class I and II BN117_2271 PF00392 Bacterial regulatory proteins, gntR family BN117_2273 PF01810 LysE type translocator BN117_2275 PF07687 Peptidase dimerisation domain BN117_2275 PF01546 Peptidase family M20/M25/M40 BN117_2276 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_2277 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2278 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2278 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_2280 PF00356 Bacterial regulatory proteins, lacI family BN117_2282 PF00376 MerR family regulatory protein BN117_2282 PF09278 MerR, DNA binding BN117_2284 PF02515 CoA-transferase family III BN117_2286 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2287 PF00392 Bacterial regulatory proteins, gntR family BN117_2287 PF07702 UTRA domain BN117_2288 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2289 PF02615 Malate/L-lactate dehydrogenase BN117_2290 PF01266 FAD dependent oxidoreductase BN117_2291 PF03807 NADP oxidoreductase coenzyme F420-dependent BN117_2291 PF14748 Pyrroline-5-carboxylate reductase dimerisation BN117_2292 PF07729 FCD domain BN117_2292 PF00392 Bacterial regulatory proteins, gntR family BN117_2297 PF00005 ABC transporter BN117_2298 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BN117_2301 PF00248 Aldo/keto reductase family BN117_2302 PF00158 Sigma-54 interaction domain BN117_2302 PF01590 GAF domain BN117_2302 PF02954 Bacterial regulatory protein, Fis family BN117_2303 PF00171 Aldehyde dehydrogenase family BN117_2306 PF04286 Protein of unknown function (DUF445) BN117_2307 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2307 PF03466 LysR substrate binding domain BN117_2309 PF07237 Protein of unknown function (DUF1428) BN117_2310 PF02805 Metal binding domain of Ada BN117_2310 PF12833 Helix-turn-helix domain BN117_2312 PF03625 Domain of unknown function DUF302 BN117_2312 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BN117_2316 PF00916 Sulfate permease family BN117_2316 PF01740 STAS domain BN117_2319 PF02535 ZIP Zinc transporter BN117_2321 PF00664 ABC transporter transmembrane region BN117_2321 PF00005 ABC transporter BN117_2322 PF00583 Acetyltransferase (GNAT) family BN117_2325 PF07690 Major Facilitator Superfamily BN117_2329 PF12833 Helix-turn-helix domain BN117_2329 PF06719 AraC-type transcriptional regulator N-terminus BN117_2331 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BN117_2332 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_2332 PF01799 [2Fe-2S] binding domain BN117_2334 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2334 PF03466 LysR substrate binding domain BN117_2336 PF00793 DAHP synthetase I family BN117_2337 PF01810 LysE type translocator BN117_2338 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_2338 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN117_2341 PF02798 Glutathione S-transferase, N-terminal domain BN117_2341 PF00043 Glutathione S-transferase, C-terminal domain BN117_2342 PF00155 Aminotransferase class I and II BN117_2342 PF00392 Bacterial regulatory proteins, gntR family BN117_2346 PF01546 Peptidase family M20/M25/M40 BN117_2346 PF07687 Peptidase dimerisation domain BN117_2347 PF01554 MatE BN117_2348 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BN117_2348 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BN117_2351 PF05853 beta-keto acid cleavage enzyme BN117_2357 PF01152 Bacterial-like globin BN117_2359 PF00005 ABC transporter BN117_2360 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2361 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_2362 PF00403 Heavy-metal-associated domain BN117_2363 PF13411 MerR HTH family regulatory protein BN117_2365 PF14698 Argininosuccinate lyase C-terminal BN117_2365 PF00206 Lyase BN117_2367 PF00795 Carbon-nitrogen hydrolase BN117_2367 PF02540 NAD synthase BN117_2368 PF00543 Nitrogen regulatory protein P-II BN117_2370 PF01479 S4 domain BN117_2373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2373 PF03466 LysR substrate binding domain BN117_2375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_2376 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2377 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_2377 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2378 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_2378 PF00005 ABC transporter BN117_2379 PF01810 LysE type translocator BN117_2380 PF07152 YaeQ protein BN117_2381 PF07690 Major Facilitator Superfamily BN117_2382 PF04345 Chorismate lyase BN117_2383 PF01479 S4 domain BN117_2383 PF00849 RNA pseudouridylate synthase BN117_2384 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2384 PF03466 LysR substrate binding domain BN117_2385 PF00529 HlyD membrane-fusion protein of T1SS BN117_2385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BN117_2386 PF00873 AcrB/AcrD/AcrF family BN117_2387 PF02321 Outer membrane efflux protein BN117_2389 PF02630 SCO1/SenC BN117_2390 PF01432 Peptidase family M3 BN117_2391 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BN117_2391 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BN117_2392 PF00072 Response regulator receiver domain BN117_2392 PF00196 Bacterial regulatory proteins, luxR family BN117_2393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_2393 PF00512 His Kinase A (phospho-acceptor) domain BN117_2393 PF00989 PAS fold BN117_2394 PF00456 Transketolase, thiamine diphosphate binding domain BN117_2394 PF17831 Pyruvate dehydrogenase E1 component middle domain BN117_2395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BN117_2395 PF00364 Biotin-requiring enzyme BN117_2395 PF02817 e3 binding domain BN117_2396 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN117_2396 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_2397 PF00700 Bacterial flagellin C-terminal helical region BN117_2397 PF00669 Bacterial flagellin N-terminal helical region BN117_2398 PF04539 Sigma-70 region 3 BN117_2398 PF04542 Sigma-70 region 2 BN117_2398 PF04545 Sigma-70, region 4 BN117_2400 PF05280 Flagellar transcriptional activator (FlhC) BN117_2401 PF01618 MotA/TolQ/ExbB proton channel family BN117_2402 PF13677 Membrane MotB of proton-channel complex MotA/MotB BN117_2402 PF00691 OmpA family BN117_2403 PF00072 Response regulator receiver domain BN117_2404 PF02895 Signal transducing histidine kinase, homodimeric domain BN117_2404 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_2404 PF09078 CheY binding BN117_2404 PF01584 CheW-like domain BN117_2404 PF01627 Hpt domain BN117_2405 PF01584 CheW-like domain BN117_2406 PF00672 HAMP domain BN117_2406 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BN117_2406 PF02203 Tar ligand binding domain homologue BN117_2407 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BN117_2407 PF00672 HAMP domain BN117_2407 PF02203 Tar ligand binding domain homologue BN117_2409 PF01311 Bacterial export proteins, family 1 BN117_2410 PF01313 Bacterial export proteins, family 3 BN117_2411 PF00813 FliP family BN117_2412 PF04347 Flagellar biosynthesis protein, FliO BN117_2413 PF16973 Flagellar motor switch protein FliN N-terminal BN117_2413 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BN117_2414 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BN117_2414 PF02154 Flagellar motor switch protein FliM BN117_2415 PF03748 Flagellar basal body-associated protein FliL BN117_2418 PF18269 T3SS EscN ATPase C-terminal domain BN117_2418 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN117_2420 PF01706 FliG C-terminal domain BN117_2420 PF14841 FliG middle domain BN117_2420 PF14842 FliG N-terminal domain BN117_2421 PF08345 Flagellar M-ring protein C-terminal BN117_2421 PF01514 Secretory protein of YscJ/FliF family BN117_2422 PF02049 Flagellar hook-basal body complex protein FliE BN117_2427 PF02561 Flagellar protein FliS BN117_2428 PF07195 Flagellar hook-associated protein 2 C-terminus BN117_2428 PF02465 Flagellar hook-associated protein 2 N-terminus BN117_2428 PF07196 Flagellin hook IN motif BN117_2430 PF02875 Mur ligase family, glutamate ligase domain BN117_2430 PF08245 Mur ligase middle domain BN117_2433 PF00156 Phosphoribosyl transferase domain BN117_2436 PF08335 GlnD PII-uridylyltransferase BN117_2436 PF01966 HD domain BN117_2436 PF01909 Nucleotidyltransferase domain BN117_2437 PF00557 Metallopeptidase family M24 BN117_2438 PF00318 Ribosomal protein S2 BN117_2439 PF00889 Elongation factor TS BN117_2440 PF00696 Amino acid kinase family BN117_2441 PF01765 Ribosome recycling factor BN117_2442 PF01255 Putative undecaprenyl diphosphate synthase BN117_2444 PF13288 DXP reductoisomerase C-terminal domain BN117_2444 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BN117_2444 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BN117_2445 PF02163 Peptidase family M50 BN117_2445 PF17820 PDZ domain BN117_2446 PF01103 Surface antigen BN117_2446 PF07244 Surface antigen variable number repeat BN117_2447 PF03938 Outer membrane protein (OmpH-like) BN117_2448 PF00132 Bacterial transferase hexapeptide (six repeats) BN117_2448 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BN117_2449 PF07977 FabA-like domain BN117_2450 PF00132 Bacterial transferase hexapeptide (six repeats) BN117_2450 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BN117_2451 PF02684 Lipid-A-disaccharide synthetase BN117_2452 PF01351 Ribonuclease HII BN117_2453 PF00588 SpoU rRNA Methylase family BN117_2453 PF08032 RNA 2'-O ribose methyltransferase substrate binding BN117_2454 PF03618 Kinase/pyrophosphorylase BN117_2455 PF00391 PEP-utilising enzyme, mobile domain BN117_2455 PF02896 PEP-utilising enzyme, TIM barrel domain BN117_2455 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BN117_2456 PF00958 GMP synthase C terminal domain BN117_2456 PF00117 Glutamine amidotransferase class-I BN117_2458 PF01145 SPFH domain / Band 7 family BN117_2458 PF16200 C-terminal region of band_7 BN117_2459 PF08448 PAS fold BN117_2459 PF00990 Diguanylate cyclase, GGDEF domain BN117_2460 PF01668 SmpB protein BN117_2461 PF03364 Polyketide cyclase / dehydrase and lipid transport BN117_2462 PF03658 RnfH family Ubiquitin BN117_2463 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_2463 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_2463 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_2464 PF00378 Enoyl-CoA hydratase/isomerase BN117_2465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BN117_2465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN117_2468 PF01571 Aminomethyltransferase folate-binding domain BN117_2469 PF02618 YceG-like family BN117_2470 PF02223 Thymidylate kinase BN117_2471 PF12169 DNA polymerase III subunits gamma and tau domain III BN117_2472 PF01026 TatD related DNase BN117_2475 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_2476 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2477 PF00005 ABC transporter BN117_2478 PF00491 Arginase family BN117_2479 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BN117_2479 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BN117_2480 PF01546 Peptidase family M20/M25/M40 BN117_2480 PF07687 Peptidase dimerisation domain BN117_2481 PF04343 Protein of unknown function, DUF488 BN117_2486 PF00990 Diguanylate cyclase, GGDEF domain BN117_2486 PF00563 EAL domain BN117_2486 PF03707 Bacterial signalling protein N terminal repeat BN117_2488 PF03741 Integral membrane protein TerC family BN117_2489 PF03707 Bacterial signalling protein N terminal repeat BN117_2489 PF00563 EAL domain BN117_2489 PF00990 Diguanylate cyclase, GGDEF domain BN117_2493 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BN117_2497 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2498 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN117_2498 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BN117_2499 PF03466 LysR substrate binding domain BN117_2499 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2500 PF00005 ABC transporter BN117_2500 PF08402 TOBE domain BN117_2501 PF09339 IclR helix-turn-helix domain BN117_2501 PF01614 Bacterial transcriptional regulator BN117_2506 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_2507 PF07702 UTRA domain BN117_2507 PF00392 Bacterial regulatory proteins, gntR family BN117_2508 PF01738 Dienelactone hydrolase family BN117_2510 PF00491 Arginase family BN117_2511 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2512 PF03466 LysR substrate binding domain BN117_2512 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2516 PF02653 Branched-chain amino acid transport system / permease component BN117_2517 PF00005 ABC transporter BN117_2519 PF12697 Alpha/beta hydrolase family BN117_2524 PF03741 Integral membrane protein TerC family BN117_2526 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2528 PF03781 Sulfatase-modifying factor enzyme 1 BN117_2535 PF00072 Response regulator receiver domain BN117_2535 PF00196 Bacterial regulatory proteins, luxR family BN117_2537 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BN117_2538 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system BN117_2539 PF02798 Glutathione S-transferase, N-terminal domain BN117_2539 PF00043 Glutathione S-transferase, C-terminal domain BN117_2541 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2544 PF09339 IclR helix-turn-helix domain BN117_2544 PF01614 Bacterial transcriptional regulator BN117_2545 PF02515 CoA-transferase family III BN117_2546 PF02803 Thiolase, C-terminal domain BN117_2546 PF00108 Thiolase, N-terminal domain BN117_2548 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2549 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_2549 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_2549 PF00378 Enoyl-CoA hydratase/isomerase BN117_2550 PF02803 Thiolase, C-terminal domain BN117_2550 PF00108 Thiolase, N-terminal domain BN117_2551 PF00465 Iron-containing alcohol dehydrogenase BN117_2552 PF03061 Thioesterase superfamily BN117_2553 PF01266 FAD dependent oxidoreductase BN117_2554 PF01494 FAD binding domain BN117_2555 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2556 PF03466 LysR substrate binding domain BN117_2556 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2557 PF03358 NADPH-dependent FMN reductase BN117_2558 PF03960 ArsC family BN117_2561 PF07969 Amidohydrolase family BN117_2562 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2564 PF03466 LysR substrate binding domain BN117_2566 PF00563 EAL domain BN117_2566 PF01590 GAF domain BN117_2566 PF00990 Diguanylate cyclase, GGDEF domain BN117_2566 PF00360 Phytochrome region BN117_2567 PF00465 Iron-containing alcohol dehydrogenase BN117_2567 PF00171 Aldehyde dehydrogenase family BN117_2569 PF16200 C-terminal region of band_7 BN117_2569 PF01145 SPFH domain / Band 7 family BN117_2571 PF00005 ABC transporter BN117_2572 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2573 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_2576 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BN117_2576 PF00384 Molybdopterin oxidoreductase BN117_2576 PF01568 Molydopterin dinucleotide binding domain BN117_2577 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BN117_2578 PF03264 NapC/NirT cytochrome c family, N-terminal region BN117_2579 PF00005 ABC transporter BN117_2580 PF03379 CcmB protein BN117_2581 PF03100 CcmE BN117_2582 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BN117_2582 PF01578 Cytochrome C assembly protein BN117_2583 PF08534 Redoxin BN117_2584 PF03918 Cytochrome C biogenesis protein BN117_2587 PF01042 Endoribonuclease L-PSP BN117_2588 PF02558 Ketopantoate reductase PanE/ApbA BN117_2588 PF08546 Ketopantoate reductase PanE/ApbA C terminal BN117_2589 PF13378 Enolase C-terminal domain-like BN117_2590 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2591 PF00330 Aconitase family (aconitate hydratase) BN117_2592 PF00694 Aconitase C-terminal domain BN117_2593 PF00356 Bacterial regulatory proteins, lacI family BN117_2595 PF02515 CoA-transferase family III BN117_2597 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2598 PF13380 CoA binding domain BN117_2598 PF13607 Succinyl-CoA ligase like flavodoxin domain BN117_2599 PF00392 Bacterial regulatory proteins, gntR family BN117_2599 PF07729 FCD domain BN117_2600 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_2602 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2602 PF03466 LysR substrate binding domain BN117_2603 PF02954 Bacterial regulatory protein, Fis family BN117_2603 PF00158 Sigma-54 interaction domain BN117_2604 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_2604 PF01610 Transposase BN117_2604 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_2605 PF00309 Sigma-54 factor, Activator interacting domain (AID) BN117_2605 PF04963 Sigma-54 factor, core binding domain BN117_2605 PF04552 Sigma-54, DNA binding domain BN117_2607 PF08323 Starch synthase catalytic domain BN117_2607 PF00534 Glycosyl transferases group 1 BN117_2609 PF00128 Alpha amylase, catalytic domain BN117_2609 PF16657 Maltogenic Amylase, C-terminal domain BN117_2610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BN117_2610 PF02806 Alpha amylase, C-terminal all-beta domain BN117_2610 PF00128 Alpha amylase, catalytic domain BN117_2611 PF00248 Aldo/keto reductase family BN117_2613 PF16485 Protealysin propeptide BN117_2613 PF01447 Thermolysin metallopeptidase, catalytic domain BN117_2613 PF02868 Thermolysin metallopeptidase, alpha-helical domain BN117_2614 PF07681 DoxX BN117_2617 PF03960 ArsC family BN117_2618 PF02515 CoA-transferase family III BN117_2621 PF00255 Glutathione peroxidase BN117_2622 PF02798 Glutathione S-transferase, N-terminal domain BN117_2622 PF00043 Glutathione S-transferase, C-terminal domain BN117_2625 PF10437 Bacterial lipoate protein ligase C-terminus BN117_2625 PF03099 Biotin/lipoate A/B protein ligase family BN117_2628 PF02666 Phosphatidylserine decarboxylase BN117_2629 PF01070 FMN-dependent dehydrogenase BN117_2630 PF03180 NLPA lipoprotein BN117_2631 PF08808 RES domain BN117_2633 PF04241 Protein of unknown function (DUF423) BN117_2634 PF00892 EamA-like transporter family BN117_2636 PF07995 Glucose / Sorbosone dehydrogenase BN117_2637 PF00043 Glutathione S-transferase, C-terminal domain BN117_2637 PF02798 Glutathione S-transferase, N-terminal domain BN117_2638 PF01177 Asp/Glu/Hydantoin racemase BN117_2639 PF00005 ABC transporter BN117_2640 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_2640 PF00005 ABC transporter BN117_2641 PF11862 Domain of unknown function (DUF3382) BN117_2641 PF02653 Branched-chain amino acid transport system / permease component BN117_2642 PF02653 Branched-chain amino acid transport system / permease component BN117_2643 PF13458 Periplasmic binding protein BN117_2644 PF02592 Putative vitamin uptake transporter BN117_2645 PF03807 NADP oxidoreductase coenzyme F420-dependent BN117_2645 PF14748 Pyrroline-5-carboxylate reductase dimerisation BN117_2646 PF13416 Bacterial extracellular solute-binding protein BN117_2647 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2648 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2649 PF00005 ABC transporter BN117_2649 PF17912 MalK OB fold domain BN117_2650 PF13458 Periplasmic binding protein BN117_2652 PF02801 Beta-ketoacyl synthase, C-terminal domain BN117_2652 PF16197 Ketoacyl-synthetase C-terminal extension BN117_2652 PF00550 Phosphopantetheine attachment site BN117_2652 PF08659 KR domain BN117_2652 PF00698 Acyl transferase domain BN117_2652 PF14765 Polyketide synthase dehydratase BN117_2652 PF00109 Beta-ketoacyl synthase, N-terminal domain BN117_2653 PF00155 Aminotransferase class I and II BN117_2655 PF00106 short chain dehydrogenase BN117_2656 PF05159 Capsule polysaccharide biosynthesis protein BN117_2658 PF01370 NAD dependent epimerase/dehydratase family BN117_2659 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BN117_2659 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BN117_2659 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BN117_2660 PF02563 Polysaccharide biosynthesis/export protein BN117_2662 PF00534 Glycosyl transferases group 1 BN117_2666 PF00535 Glycosyl transferase family 2 BN117_2669 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_2669 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_2669 PF01610 Transposase BN117_2670 PF00210 Ferritin-like domain BN117_2671 PF00171 Aldehyde dehydrogenase family BN117_2672 PF03466 LysR substrate binding domain BN117_2672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2673 PF03466 LysR substrate binding domain BN117_2673 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2674 PF17191 RecG wedge domain BN117_2674 PF00271 Helicase conserved C-terminal domain BN117_2674 PF00270 DEAD/DEAH box helicase BN117_2675 PF01042 Endoribonuclease L-PSP BN117_2676 PF03797 Autotransporter beta-domain BN117_2676 PF03212 Pertactin BN117_2677 PF00248 Aldo/keto reductase family BN117_2678 PF07690 Major Facilitator Superfamily BN117_2679 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2679 PF03466 LysR substrate binding domain BN117_2680 PF00175 Oxidoreductase NAD-binding domain BN117_2680 PF00970 Oxidoreductase FAD-binding domain BN117_2682 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2683 PF00005 ABC transporter BN117_2683 PF08402 TOBE domain BN117_2684 PF05726 Pirin C-terminal cupin domain BN117_2684 PF02678 Pirin BN117_2685 PF17954 Quercetinase C-terminal cupin domain BN117_2685 PF02678 Pirin BN117_2687 PF02954 Bacterial regulatory protein, Fis family BN117_2687 PF00072 Response regulator receiver domain BN117_2687 PF00158 Sigma-54 interaction domain BN117_2688 PF00989 PAS fold BN117_2688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_2688 PF00512 His Kinase A (phospho-acceptor) domain BN117_2689 PF03951 Glutamine synthetase, beta-Grasp domain BN117_2689 PF00120 Glutamine synthetase, catalytic domain BN117_2690 PF06969 HemN C-terminal domain BN117_2690 PF04055 Radical SAM superfamily BN117_2691 PF01725 Ham1 family BN117_2692 PF00990 Diguanylate cyclase, GGDEF domain BN117_2692 PF08448 PAS fold BN117_2692 PF00563 EAL domain BN117_2693 PF02203 Tar ligand binding domain homologue BN117_2693 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BN117_2693 PF00672 HAMP domain BN117_2694 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2694 PF03466 LysR substrate binding domain BN117_2696 PF03725 3' exoribonuclease family, domain 2 BN117_2696 PF01138 3' exoribonuclease family, domain 1 BN117_2697 PF03755 YicC-like family, N-terminal region BN117_2697 PF08340 Domain of unknown function (DUF1732) BN117_2700 PF01048 Phosphorylase superfamily BN117_2700 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BN117_2701 PF00877 NlpC/P60 family BN117_2703 PF00034 Cytochrome c BN117_2704 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BN117_2705 PF00625 Guanylate kinase BN117_2706 PF01192 RNA polymerase Rpb6 BN117_2707 PF04607 Region found in RelA / SpoT proteins BN117_2707 PF13291 ACT domain BN117_2707 PF02824 TGS domain BN117_2708 PF00005 ABC transporter BN117_2709 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2710 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_2712 PF01968 Hydantoinase/oxoprolinase BN117_2712 PF05378 Hydantoinase/oxoprolinase N-terminal region BN117_2714 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2714 PF03466 LysR substrate binding domain BN117_2718 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_2719 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_2721 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_2722 PF17287 POTRA domain BN117_2722 PF08479 POTRA domain, ShlB-type BN117_2722 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BN117_2723 PF00419 Fimbrial protein BN117_2724 PF13953 PapC C-terminal domain BN117_2724 PF13954 PapC N-terminal domain BN117_2724 PF00577 Outer membrane usher protein BN117_2725 PF02753 Pili assembly chaperone PapD, C-terminal domain BN117_2725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BN117_2726 PF16970 Type-1 fimbrial protein, A BN117_2727 PF13018 Extended Signal Peptide of Type V secretion system BN117_2727 PF05594 Haemagluttinin repeat BN117_2727 PF13332 Hemagglutinin repeat BN117_2727 PF05860 haemagglutination activity domain BN117_2728 PF00196 Bacterial regulatory proteins, luxR family BN117_2728 PF00072 Response regulator receiver domain BN117_2729 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_2729 PF00512 His Kinase A (phospho-acceptor) domain BN117_2729 PF01627 Hpt domain BN117_2729 PF00989 PAS fold BN117_2729 PF00072 Response regulator receiver domain BN117_2729 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_2731 PF07286 Protein of unknown function (DUF1445) BN117_2732 PF01425 Amidase BN117_2734 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_2737 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_2737 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_2737 PF01610 Transposase BN117_2738 PF03466 LysR substrate binding domain BN117_2738 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2740 PF00005 ABC transporter BN117_2741 PF13472 GDSL-like Lipase/Acylhydrolase family BN117_2742 PF13145 PPIC-type PPIASE domain BN117_2743 PF03009 Glycerophosphoryl diester phosphodiesterase family BN117_2744 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BN117_2745 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_2745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN117_2746 PF08534 Redoxin BN117_2746 PF00462 Glutaredoxin BN117_2748 PF00376 MerR family regulatory protein BN117_2748 PF09278 MerR, DNA binding BN117_2749 PF05958 tRNA (Uracil-5-)-methyltransferase BN117_2753 PF01551 Peptidase family M23 BN117_2753 PF01476 LysM domain BN117_2755 PF01975 Survival protein SurE BN117_2756 PF02660 Glycerol-3-phosphate acyltransferase BN117_2757 PF00814 Glycoprotease family BN117_2758 PF00860 Permease family BN117_2759 PF00296 Luciferase-like monooxygenase BN117_2760 PF00085 Thioredoxin BN117_2761 PF01205 Uncharacterized protein family UPF0029 BN117_2765 PF00005 ABC transporter BN117_2766 PF12848 ABC transporter BN117_2766 PF00005 ABC transporter BN117_2769 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_2770 PF00378 Enoyl-CoA hydratase/isomerase BN117_2771 PF02016 LD-carboxypeptidase N-terminal domain BN117_2771 PF17676 LD-carboxypeptidase C-terminal domain BN117_2772 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN117_2776 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BN117_2777 PF01899 Na+/H+ ion antiporter subunit BN117_2778 PF00361 Proton-conducting membrane transporter BN117_2779 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BN117_2780 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BN117_2780 PF00361 Proton-conducting membrane transporter BN117_2780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BN117_2780 PF13244 Domain of unknown function (DUF4040) BN117_2781 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2783 PF00149 Calcineurin-like phosphoesterase BN117_2783 PF12320 Type 5 capsule protein repressor C-terminal domain BN117_2784 PF01266 FAD dependent oxidoreductase BN117_2785 PF01037 Lrp/AsnC ligand binding domain BN117_2790 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2791 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2792 PF00005 ABC transporter BN117_2792 PF17912 MalK OB fold domain BN117_2793 PF17912 MalK OB fold domain BN117_2793 PF00005 ABC transporter BN117_2794 PF08220 DeoR-like helix-turn-helix domain BN117_2794 PF00455 DeoR C terminal sensor domain BN117_2795 PF01266 FAD dependent oxidoreductase BN117_2795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BN117_2797 PF00106 short chain dehydrogenase BN117_2798 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2799 PF00890 FAD binding domain BN117_2799 PF14537 Cytochrome c3 BN117_2804 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2805 PF00701 Dihydrodipicolinate synthetase family BN117_2809 PF00472 RF-1 domain BN117_2811 PF01242 6-pyruvoyl tetrahydropterin synthase BN117_2812 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_2813 PF00596 Class II Aldolase and Adducin N-terminal domain BN117_2818 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BN117_2818 PF00529 HlyD membrane-fusion protein of T1SS BN117_2819 PF02321 Outer membrane efflux protein BN117_2820 PF02230 Phospholipase/Carboxylesterase BN117_2823 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BN117_2823 PF07733 Bacterial DNA polymerase III alpha NTPase domain BN117_2823 PF14579 Helix-hairpin-helix motif BN117_2823 PF02811 PHP domain BN117_2824 PF01266 FAD dependent oxidoreductase BN117_2825 PF02082 Transcriptional regulator BN117_2826 PF00175 Oxidoreductase NAD-binding domain BN117_2826 PF00970 Oxidoreductase FAD-binding domain BN117_2826 PF00042 Globin BN117_2828 PF00817 impB/mucB/samB family BN117_2828 PF11799 impB/mucB/samB family C-terminal domain BN117_2828 PF11798 IMS family HHH motif BN117_2831 PF00326 Prolyl oligopeptidase family BN117_2832 PF00912 Transglycosylase BN117_2832 PF00905 Penicillin binding protein transpeptidase domain BN117_2832 PF17092 Penicillin-binding protein OB-like domain BN117_2833 PF00149 Calcineurin-like phosphoesterase BN117_2836 PF00248 Aldo/keto reductase family BN117_2849 PF00990 Diguanylate cyclase, GGDEF domain BN117_2850 PF08447 PAS fold BN117_2850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BN117_2851 PF12792 CSS motif domain associated with EAL BN117_2851 PF00563 EAL domain BN117_2852 PF01588 Putative tRNA binding domain BN117_2855 PF00324 Amino acid permease BN117_2858 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2859 PF00682 HMGL-like BN117_2861 PF00158 Sigma-54 interaction domain BN117_2861 PF06506 Propionate catabolism activator BN117_2861 PF02954 Bacterial regulatory protein, Fis family BN117_2862 PF01914 MarC family integral membrane protein BN117_2866 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_2866 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_2866 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_2867 PF02515 CoA-transferase family III BN117_2868 PF00171 Aldehyde dehydrogenase family BN117_2869 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_2869 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_2869 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_2870 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2871 PF03401 Tripartite tricarboxylate transporter family receptor BN117_2872 PF03466 LysR substrate binding domain BN117_2872 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2873 PF12228 Protein of unknown function (DUF3604) BN117_2875 PF02803 Thiolase, C-terminal domain BN117_2875 PF00108 Thiolase, N-terminal domain BN117_2876 PF00501 AMP-binding enzyme BN117_2876 PF14535 AMP-binding enzyme C-terminal domain BN117_2877 PF07859 alpha/beta hydrolase fold BN117_2878 PF02515 CoA-transferase family III BN117_2879 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_2882 PF00866 Ring hydroxylating beta subunit BN117_2883 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BN117_2883 PF00355 Rieske [2Fe-2S] domain BN117_2884 PF13458 Periplasmic binding protein BN117_2886 PF11862 Domain of unknown function (DUF3382) BN117_2886 PF02653 Branched-chain amino acid transport system / permease component BN117_2887 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_2887 PF00005 ABC transporter BN117_2888 PF00005 ABC transporter BN117_2890 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_2890 PF14759 Reductase C-terminal BN117_2895 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system BN117_2897 PF02384 N-6 DNA Methylase BN117_2898 PF09572 XamI restriction endonuclease BN117_2905 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BN117_2908 PF07996 Type IV secretion system proteins BN117_2912 PF00589 Phage integrase family BN117_2913 PF04546 Sigma-70, non-essential region BN117_2913 PF03979 Sigma-70 factor, region 1.1 BN117_2913 PF00140 Sigma-70 factor, region 1.2 BN117_2913 PF04542 Sigma-70 region 2 BN117_2913 PF04539 Sigma-70 region 3 BN117_2913 PF04545 Sigma-70, region 4 BN117_2915 PF01165 Ribosomal protein S21 BN117_2916 PF00156 Phosphoribosyl transferase domain BN117_2917 PF00709 Adenylosuccinate synthetase BN117_2918 PF13393 Histidyl-tRNA synthetase BN117_2919 PF01145 SPFH domain / Band 7 family BN117_2920 PF01145 SPFH domain / Band 7 family BN117_2920 PF12221 Bacterial membrane protein N terminal BN117_2921 PF16360 GTP-binding GTPase Middle Region BN117_2921 PF13167 GTP-binding GTPase N-terminal BN117_2921 PF01926 50S ribosome-binding GTPase BN117_2922 PF17209 Hfq protein BN117_2923 PF00155 Aminotransferase class I and II BN117_2924 PF01926 50S ribosome-binding GTPase BN117_2924 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BN117_2925 PF13360 PQQ-like domain BN117_2926 PF09976 Tetratricopeptide repeat-like domain BN117_2927 PF03129 Anticodon binding domain BN117_2927 PF13393 Histidyl-tRNA synthetase BN117_2928 PF04551 GcpE protein BN117_2930 PF04055 Radical SAM superfamily BN117_2931 PF00334 Nucleoside diphosphate kinase BN117_2932 PF00133 tRNA synthetases class I (I, L, M and V) BN117_2932 PF08264 Anticodon-binding domain of tRNA BN117_2932 PF10458 Valyl tRNA synthetase tRNA binding arm BN117_2934 PF00486 Transcriptional regulatory protein, C terminal BN117_2934 PF00072 Response regulator receiver domain BN117_2938 PF01746 tRNA (Guanine-1)-methyltransferase BN117_2939 PF01782 RimM N-terminal domain BN117_2940 PF00886 Ribosomal protein S16 BN117_2942 PF01206 Sulfurtransferase TusA BN117_2943 PF01411 tRNA synthetases class II (A) BN117_2943 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BN117_2943 PF02272 DHHA1 domain BN117_2952 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_2952 PF01610 Transposase BN117_2952 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_2953 PF01425 Amidase BN117_2954 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_2954 PF00005 ABC transporter BN117_2955 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2956 PF00528 Binding-protein-dependent transport system inner membrane component BN117_2957 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_2960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_2960 PF03466 LysR substrate binding domain BN117_2961 PF13416 Bacterial extracellular solute-binding protein BN117_2962 PF01266 FAD dependent oxidoreductase BN117_2963 PF00970 Oxidoreductase FAD-binding domain BN117_2963 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_2963 PF00175 Oxidoreductase NAD-binding domain BN117_2964 PF02261 Aspartate decarboxylase BN117_2967 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BN117_2968 PF17042 Nucleotide-binding C-terminal domain BN117_2968 PF07005 Sugar-binding N-terminal domain BN117_2969 PF03812 2-keto-3-deoxygluconate permease BN117_2970 PF05721 Phytanoyl-CoA dioxygenase (PhyH) BN117_2971 PF06339 Ectoine synthase BN117_2972 PF00202 Aminotransferase class-III BN117_2973 PF00583 Acetyltransferase (GNAT) family BN117_2974 PF12802 MarR family BN117_2976 PF00202 Aminotransferase class-III BN117_2977 PF16868 NMT1-like family BN117_2979 PF04235 Protein of unknown function (DUF418) BN117_2980 PF00521 DNA gyrase/topoisomerase IV, subunit A BN117_2982 PF01751 Toprim domain BN117_2982 PF00204 DNA gyrase B BN117_2982 PF00986 DNA gyrase B subunit, carboxyl terminus BN117_2982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_2983 PF00085 Thioredoxin BN117_2984 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN117_2984 PF07497 Rho termination factor, RNA-binding domain BN117_2984 PF07498 Rho termination factor, N-terminal domain BN117_2986 PF08335 GlnD PII-uridylyltransferase BN117_2986 PF03710 Glutamate-ammonia ligase adenylyltransferase BN117_2987 PF02677 Epoxyqueuosine reductase QueH BN117_2988 PF03313 Serine dehydratase alpha chain BN117_2988 PF03315 Serine dehydratase beta chain BN117_2989 PF02690 Na+/Pi-cotransporter BN117_2990 PF01738 Dienelactone hydrolase family BN117_2992 PF00476 DNA polymerase family A BN117_2992 PF01612 3'-5' exonuclease BN117_2992 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BN117_2992 PF01367 5'-3' exonuclease, C-terminal SAM fold BN117_2993 PF03641 Possible lysine decarboxylase BN117_2996 PF03144 Elongation factor Tu domain 2 BN117_2996 PF00009 Elongation factor Tu GTP binding domain BN117_2996 PF00679 Elongation factor G C-terminus BN117_2997 PF16198 tRNA pseudouridylate synthase B C-terminal domain BN117_2997 PF01509 TruB family pseudouridylate synthase (N terminal domain) BN117_2998 PF02033 Ribosome-binding factor A BN117_2999 PF00009 Elongation factor Tu GTP binding domain BN117_2999 PF08364 Bacterial translation initiation factor IF-2 associated region BN117_2999 PF04760 Translation initiation factor IF-2, N-terminal region BN117_2999 PF11987 Translation-initiation factor 2 BN117_3000 PF08529 NusA N-terminal domain BN117_3000 PF13184 NusA-like KH domain BN117_3001 PF17384 RimP C-terminal SH3 domain BN117_3001 PF02576 RimP N-terminal domain BN117_3002 PF01479 S4 domain BN117_3002 PF00849 RNA pseudouridylate synthase BN117_3003 PF04079 Segregation and condensation complex subunit ScpB BN117_3004 PF03466 LysR substrate binding domain BN117_3004 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3005 PF00881 Nitroreductase family BN117_3006 PF07683 Cobalamin synthesis protein cobW C-terminal domain BN117_3006 PF02492 CobW/HypB/UreG, nucleotide-binding domain BN117_3008 PF02798 Glutathione S-transferase, N-terminal domain BN117_3008 PF14497 Glutathione S-transferase, C-terminal domain BN117_3009 PF02401 LytB protein BN117_3010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BN117_3011 PF04002 RadC-like JAB domain BN117_3012 PF04199 Putative cyclase BN117_3013 PF03301 Tryptophan 2,3-dioxygenase BN117_3014 PF01197 Ribosomal protein L31 BN117_3016 PF01554 MatE BN117_3019 PF18073 Rubredoxin metal binding domain BN117_3020 PF12034 Domain of unknown function (DUF3520) BN117_3020 PF12450 von Willebrand factor BN117_3020 PF00092 von Willebrand factor type A domain BN117_3021 PF04542 Sigma-70 region 2 BN117_3021 PF04545 Sigma-70, region 4 BN117_3024 PF00842 Alanine racemase, C-terminal domain BN117_3024 PF01168 Alanine racemase, N-terminal domain BN117_3027 PF01593 Flavin containing amine oxidoreductase BN117_3027 PF01593 Flavin containing amine oxidoreductase BN117_3028 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BN117_3030 PF00005 ABC transporter BN117_3034 PF02424 ApbE family BN117_3035 PF00175 Oxidoreductase NAD-binding domain BN117_3035 PF00258 Flavodoxin BN117_3035 PF00667 FAD binding domain BN117_3037 PF07969 Amidohydrolase family BN117_3038 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3038 PF03466 LysR substrate binding domain BN117_3040 PF09370 Phosphoenolpyruvate hydrolase-like BN117_3043 PF03797 Autotransporter beta-domain BN117_3043 PF03212 Pertactin BN117_3044 PF03212 Pertactin BN117_3044 PF03797 Autotransporter beta-domain BN117_3045 PF02861 Clp amino terminal domain, pathogenicity island component BN117_3045 PF10431 C-terminal, D2-small domain, of ClpB protein BN117_3045 PF17871 AAA lid domain BN117_3045 PF07724 AAA domain (Cdc48 subfamily) BN117_3045 PF00004 ATPase family associated with various cellular activities (AAA) BN117_3046 PF00027 Cyclic nucleotide-binding domain BN117_3046 PF13545 Crp-like helix-turn-helix domain BN117_3049 PF00293 NUDIX domain BN117_3050 PF12843 Putative quorum-sensing-regulated virulence factor BN117_3052 PF04542 Sigma-70 region 2 BN117_3052 PF12680 SnoaL-like domain BN117_3052 PF08281 Sigma-70, region 4 BN117_3053 PF02627 Carboxymuconolactone decarboxylase family BN117_3057 PF03737 Aldolase/RraA BN117_3058 PF00155 Aminotransferase class I and II BN117_3059 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_3060 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3061 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3062 PF00005 ABC transporter BN117_3066 PF04325 Protein of unknown function (DUF465) BN117_3067 PF07690 Major Facilitator Superfamily BN117_3068 PF03466 LysR substrate binding domain BN117_3068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3069 PF03707 Bacterial signalling protein N terminal repeat BN117_3069 PF00990 Diguanylate cyclase, GGDEF domain BN117_3069 PF00563 EAL domain BN117_3070 PF01594 AI-2E family transporter BN117_3071 PF01061 ABC-2 type transporter BN117_3072 PF00005 ABC transporter BN117_3077 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BN117_3077 PF12801 4Fe-4S binding domain BN117_3077 PF13746 4Fe-4S dicluster domain BN117_3078 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BN117_3078 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BN117_3084 PF00202 Aminotransferase class-III BN117_3085 PF00155 Aminotransferase class I and II BN117_3087 PF13649 Methyltransferase domain BN117_3088 PF03788 LrgA family BN117_3089 PF04172 LrgB-like family BN117_3091 PF00463 Isocitrate lyase family BN117_3092 PF14489 QueF-like protein BN117_3092 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BN117_3094 PF01066 CDP-alcohol phosphatidyltransferase BN117_3095 PF01541 GIY-YIG catalytic domain BN117_3095 PF08459 UvrC Helix-hairpin-helix N-terminal BN117_3095 PF02151 UvrB/uvrC motif BN117_3096 PF00933 Glycosyl hydrolase family 3 N terminal domain BN117_3097 PF01648 4'-phosphopantetheinyl transferase superfamily BN117_3098 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BN117_3099 PF02321 Outer membrane efflux protein BN117_3100 PF00873 AcrB/AcrD/AcrF family BN117_3101 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BN117_3101 PF00529 HlyD membrane-fusion protein of T1SS BN117_3103 PF01610 Transposase BN117_3103 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_3103 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_3107 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3107 PF03466 LysR substrate binding domain BN117_3113 PF13193 AMP-binding enzyme C-terminal domain BN117_3113 PF00501 AMP-binding enzyme BN117_3115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3115 PF03466 LysR substrate binding domain BN117_3116 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3118 PF01557 Fumarylacetoacetate (FAA) hydrolase family BN117_3121 PF04303 PrpF protein BN117_3123 PF00890 FAD binding domain BN117_3123 PF14537 Cytochrome c3 BN117_3125 PF03972 MmgE/PrpD family BN117_3126 PF00005 ABC transporter BN117_3127 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3129 PF09084 NMT1/THI5 like BN117_3130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3130 PF03466 LysR substrate binding domain BN117_3132 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_3132 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_3133 PF00155 Aminotransferase class I and II BN117_3134 PF01968 Hydantoinase/oxoprolinase BN117_3134 PF05378 Hydantoinase/oxoprolinase N-terminal region BN117_3136 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3137 PF00881 Nitroreductase family BN117_3139 PF00990 Diguanylate cyclase, GGDEF domain BN117_3139 PF07694 5TMR of 5TMR-LYT BN117_3140 PF00582 Universal stress protein family BN117_3142 PF13406 Transglycosylase SLT domain BN117_3143 PF04305 Protein of unknown function (DUF455) BN117_3146 PF00664 ABC transporter transmembrane region BN117_3146 PF00005 ABC transporter BN117_3147 PF02875 Mur ligase family, glutamate ligase domain BN117_3147 PF08443 RimK-like ATP-grasp domain BN117_3147 PF08245 Mur ligase middle domain BN117_3148 PF08245 Mur ligase middle domain BN117_3148 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN117_3148 PF02875 Mur ligase family, glutamate ligase domain BN117_3149 PF05532 CsbD-like BN117_3151 PF04972 BON domain BN117_3152 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_3152 PF01610 Transposase BN117_3152 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_3153 PF02567 Phenazine biosynthesis-like protein BN117_3155 PF03239 Iron permease FTR1 family BN117_3157 PF10634 Fe2+ transport protein BN117_3158 PF05233 PHB accumulation regulatory domain BN117_3158 PF07879 PHB/PHA accumulation regulator DNA-binding domain BN117_3159 PF00106 short chain dehydrogenase BN117_3160 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BN117_3161 PF02578 Multi-copper polyphenol oxidoreductase laccase BN117_3162 PF01479 S4 domain BN117_3162 PF00849 RNA pseudouridylate synthase BN117_3163 PF13525 Outer membrane lipoprotein BN117_3164 PF13307 Helicase C-terminal domain BN117_3164 PF04851 Type III restriction enzyme, res subunit BN117_3165 PF17674 HHH domain BN117_3165 PF00575 S1 RNA binding domain BN117_3165 PF09371 Tex-like protein N-terminal domain BN117_3165 PF16921 Tex protein YqgF-like domain BN117_3166 PF00579 tRNA synthetases class I (W and Y) BN117_3170 PF07715 TonB-dependent Receptor Plug Domain BN117_3170 PF00593 TonB dependent receptor BN117_3171 PF16220 Domain of unknown function (DUF4880) BN117_3171 PF04773 FecR protein BN117_3172 PF04542 Sigma-70 region 2 BN117_3172 PF08281 Sigma-70, region 4 BN117_3173 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BN117_3175 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3176 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3176 PF03466 LysR substrate binding domain BN117_3178 PF03969 AFG1-like ATPase BN117_3179 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_3179 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN117_3180 PF00364 Biotin-requiring enzyme BN117_3180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BN117_3180 PF02817 e3 binding domain BN117_3181 PF02779 Transketolase, pyrimidine binding domain BN117_3181 PF16870 2-oxoglutarate dehydrogenase C-terminal BN117_3181 PF00676 Dehydrogenase E1 component BN117_3181 PF16078 2-oxoglutarate dehydrogenase N-terminus BN117_3182 PF03169 OPT oligopeptide transporter protein BN117_3184 PF00456 Transketolase, thiamine diphosphate binding domain BN117_3184 PF17831 Pyruvate dehydrogenase E1 component middle domain BN117_3185 PF01515 Phosphate acetyl/butaryl transferase BN117_3185 PF03949 Malic enzyme, NAD binding domain BN117_3185 PF00390 Malic enzyme, N-terminal domain BN117_3186 PF16970 Type-1 fimbrial protein, A BN117_3189 PF00285 Citrate synthase, C-terminal domain BN117_3190 PF03937 Flavinator of succinate dehydrogenase BN117_3191 PF13085 2Fe-2S iron-sulfur cluster binding domain BN117_3192 PF02910 Fumarate reductase flavoprotein C-term BN117_3192 PF00890 FAD binding domain BN117_3193 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BN117_3194 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BN117_3195 PF00392 Bacterial regulatory proteins, gntR family BN117_3195 PF07702 UTRA domain BN117_3196 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BN117_3196 PF00056 lactate/malate dehydrogenase, NAD binding domain BN117_3198 PF00285 Citrate synthase, C-terminal domain BN117_3199 PF00330 Aconitase family (aconitate hydratase) BN117_3199 PF00694 Aconitase C-terminal domain BN117_3200 PF04303 PrpF protein BN117_3201 PF03972 MmgE/PrpD family BN117_3202 PF03653 Uncharacterised protein family (UPF0093) BN117_3203 PF02926 THUMP domain BN117_3203 PF01170 Putative RNA methylase family UPF0020 BN117_3207 PF13193 AMP-binding enzyme C-terminal domain BN117_3207 PF00501 AMP-binding enzyme BN117_3207 PF16177 Acetyl-coenzyme A synthetase N-terminus BN117_3209 PF01430 Hsp33 protein BN117_3214 PF00211 Adenylate and Guanylate cyclase catalytic domain BN117_3215 PF04977 Septum formation initiator BN117_3216 PF03952 Enolase, N-terminal domain BN117_3216 PF00113 Enolase, C-terminal TIM barrel domain BN117_3218 PF00793 DAHP synthetase I family BN117_3219 PF00117 Glutamine amidotransferase class-I BN117_3219 PF06418 CTP synthase N-terminus BN117_3220 PF00557 Metallopeptidase family M24 BN117_3220 PF01321 Creatinase/Prolidase N-terminal domain BN117_3222 PF03576 Peptidase family S58 BN117_3223 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_3223 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3224 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_3226 PF00005 ABC transporter BN117_3226 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_3227 PF01112 Asparaginase BN117_3229 PF01144 Coenzyme A transferase BN117_3230 PF01144 Coenzyme A transferase BN117_3233 PF16363 GDP-mannose 4,6 dehydratase BN117_3236 PF01212 Beta-eliminating lyase BN117_3237 PF00892 EamA-like transporter family BN117_3238 PF00501 AMP-binding enzyme BN117_3238 PF16177 Acetyl-coenzyme A synthetase N-terminus BN117_3238 PF13193 AMP-binding enzyme C-terminal domain BN117_3240 PF03928 Haem-degrading BN117_3241 PF13193 AMP-binding enzyme C-terminal domain BN117_3241 PF00501 AMP-binding enzyme BN117_3241 PF16177 Acetyl-coenzyme A synthetase N-terminus BN117_3242 PF00877 NlpC/P60 family BN117_3244 PF03466 LysR substrate binding domain BN117_3244 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3245 PF00171 Aldehyde dehydrogenase family BN117_3247 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3247 PF03466 LysR substrate binding domain BN117_3249 PF00883 Cytosol aminopeptidase family, catalytic domain BN117_3249 PF02789 Cytosol aminopeptidase family, N-terminal domain BN117_3250 PF04364 DNA polymerase III chi subunit, HolC BN117_3252 PF01027 Inhibitor of apoptosis-promoting Bax1 BN117_3253 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3255 PF00291 Pyridoxal-phosphate dependent enzyme BN117_3257 PF02565 Recombination protein O C terminal BN117_3257 PF11967 Recombination protein O N terminal BN117_3258 PF07650 KH domain BN117_3258 PF01926 50S ribosome-binding GTPase BN117_3259 PF00035 Double-stranded RNA binding motif BN117_3259 PF14622 Ribonuclease-III-like BN117_3260 PF10502 Signal peptidase, peptidase S26 BN117_3261 PF03144 Elongation factor Tu domain 2 BN117_3261 PF00009 Elongation factor Tu GTP binding domain BN117_3261 PF00679 Elongation factor G C-terminus BN117_3261 PF06421 GTP-binding protein LepA C-terminus BN117_3262 PF17820 PDZ domain BN117_3262 PF13180 PDZ domain BN117_3265 PF04542 Sigma-70 region 2 BN117_3265 PF08281 Sigma-70, region 4 BN117_3267 PF00109 Beta-ketoacyl synthase, N-terminal domain BN117_3267 PF02801 Beta-ketoacyl synthase, C-terminal domain BN117_3268 PF00550 Phosphopantetheine attachment site BN117_3270 PF00698 Acyl transferase domain BN117_3271 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BN117_3271 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BN117_3272 PF02504 Fatty acid synthesis protein BN117_3273 PF01783 Ribosomal L32p protein family BN117_3274 PF02620 Large ribosomal RNA subunit accumulation protein YceD BN117_3275 PF02545 Maf-like protein BN117_3276 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BN117_3277 PF01510 N-acetylmuramoyl-L-alanine amidase BN117_3278 PF01794 Ferric reductase like transmembrane component BN117_3279 PF00174 Oxidoreductase molybdopterin binding domain BN117_3280 PF13419 Haloacid dehalogenase-like hydrolase BN117_3281 PF01479 S4 domain BN117_3281 PF00849 RNA pseudouridylate synthase BN117_3282 PF12111 Polyribonucleotide phosphorylase C terminal BN117_3282 PF10150 Ribonuclease E/G family BN117_3282 PF00575 S1 RNA binding domain BN117_3284 PF09411 Lipid A 3-O-deacylase (PagL) BN117_3285 PF17848 Acetyl-coA carboxylase zinc finger domain BN117_3285 PF01039 Carboxyl transferase domain BN117_3286 PF00290 Tryptophan synthase alpha chain BN117_3287 PF00291 Pyridoxal-phosphate dependent enzyme BN117_3288 PF07687 Peptidase dimerisation domain BN117_3288 PF01546 Peptidase family M20/M25/M40 BN117_3289 PF02824 TGS domain BN117_3289 PF04607 Region found in RelA / SpoT proteins BN117_3289 PF13291 ACT domain BN117_3290 PF06167 Glucose-regulated metallo-peptidase M90 BN117_3292 PF01042 Endoribonuclease L-PSP BN117_3293 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BN117_3293 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BN117_3294 PF00037 4Fe-4S binding domain BN117_3294 PF11953 Domain of unknown function (DUF3470) BN117_3295 PF00970 Oxidoreductase FAD-binding domain BN117_3295 PF00175 Oxidoreductase NAD-binding domain BN117_3297 PF04060 Putative Fe-S cluster BN117_3298 PF10576 Iron-sulfur binding domain of endonuclease III BN117_3298 PF00633 Helix-hairpin-helix motif BN117_3298 PF00730 HhH-GPD superfamily base excision DNA repair protein BN117_3299 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_3299 PF00005 ABC transporter BN117_3300 PF00005 ABC transporter BN117_3302 PF02653 Branched-chain amino acid transport system / permease component BN117_3305 PF01063 Amino-transferase class IV BN117_3306 PF00005 ABC transporter BN117_3307 PF00005 ABC transporter BN117_3307 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_3310 PF02632 BioY family BN117_3311 PF02361 Cobalt transport protein BN117_3312 PF00005 ABC transporter BN117_3313 PF01641 SelR domain BN117_3314 PF04279 Intracellular septation protein A BN117_3315 PF01722 BolA-like protein BN117_3317 PF12826 Helix-hairpin-helix motif BN117_3317 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BN117_3317 PF03120 NAD-dependent DNA ligase OB-fold domain BN117_3317 PF01653 NAD-dependent DNA ligase adenylation domain BN117_3317 PF00533 BRCA1 C Terminus (BRCT) domain BN117_3319 PF02463 RecF/RecN/SMC N terminal domain BN117_3319 PF06470 SMC proteins Flexible Hinge Domain BN117_3320 PF07690 Major Facilitator Superfamily BN117_3321 PF03167 Uracil DNA glycosylase superfamily BN117_3322 PF00814 Glycoprotease family BN117_3323 PF00072 Response regulator receiver domain BN117_3323 PF00486 Transcriptional regulatory protein, C terminal BN117_3324 PF00672 HAMP domain BN117_3324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_3324 PF00512 His Kinase A (phospho-acceptor) domain BN117_3325 PF00578 AhpC/TSA family BN117_3326 PF02627 Carboxymuconolactone decarboxylase family BN117_3328 PF07690 Major Facilitator Superfamily BN117_3329 PF02542 YgbB family BN117_3330 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BN117_3331 PF02559 CarD-like/TRCF domain BN117_3331 PF00271 Helicase conserved C-terminal domain BN117_3331 PF03461 TRCF domain BN117_3331 PF00270 DEAD/DEAH box helicase BN117_3331 PF17757 UvrB interaction domain BN117_3333 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3333 PF03466 LysR substrate binding domain BN117_3334 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_3335 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_3335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_3341 PF00361 Proton-conducting membrane transporter BN117_3342 PF00361 Proton-conducting membrane transporter BN117_3342 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BN117_3343 PF00361 Proton-conducting membrane transporter BN117_3343 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BN117_3344 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BN117_3345 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BN117_3346 PF12838 4Fe-4S dicluster domain BN117_3347 PF00146 NADH dehydrogenase BN117_3348 PF00384 Molybdopterin oxidoreductase BN117_3348 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BN117_3348 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BN117_3349 PF10531 SLBB domain BN117_3349 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BN117_3349 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BN117_3351 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BN117_3352 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BN117_3353 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BN117_3354 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BN117_3355 PF13609 Gram-negative porin BN117_3359 PF01569 PAP2 superfamily BN117_3361 PF00781 Diacylglycerol kinase catalytic domain BN117_3362 PF03466 LysR substrate binding domain BN117_3362 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3363 PF02028 BCCT, betaine/carnitine/choline family transporter BN117_3364 PF01638 HxlR-like helix-turn-helix BN117_3367 PF02321 Outer membrane efflux protein BN117_3369 PF00127 Copper binding proteins, plastocyanin/azurin family BN117_3373 PF01266 FAD dependent oxidoreductase BN117_3374 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3377 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BN117_3378 PF01053 Cys/Met metabolism PLP-dependent enzyme BN117_3379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3379 PF03466 LysR substrate binding domain BN117_3381 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3382 PF00206 Lyase BN117_3382 PF14698 Argininosuccinate lyase C-terminal BN117_3384 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3385 PF05034 Methylaspartate ammonia-lyase N-terminus BN117_3385 PF07476 Methylaspartate ammonia-lyase C-terminus BN117_3387 PF02028 BCCT, betaine/carnitine/choline family transporter BN117_3388 PF03840 Preprotein translocase SecG subunit BN117_3389 PF00121 Triosephosphate isomerase BN117_3390 PF00550 Phosphopantetheine attachment site BN117_3390 PF02801 Beta-ketoacyl synthase, C-terminal domain BN117_3390 PF00109 Beta-ketoacyl synthase, N-terminal domain BN117_3390 PF08659 KR domain BN117_3390 PF00698 Acyl transferase domain BN117_3390 PF08240 Alcohol dehydrogenase GroES-like domain BN117_3390 PF08990 Erythronolide synthase docking BN117_3390 PF09277 Erythronolide synthase, docking BN117_3390 PF14765 Polyketide synthase dehydratase BN117_3390 PF16197 Ketoacyl-synthetase C-terminal extension BN117_3392 PF00291 Pyridoxal-phosphate dependent enzyme BN117_3392 PF13291 ACT domain BN117_3394 PF00575 S1 RNA binding domain BN117_3394 PF01138 3' exoribonuclease family, domain 1 BN117_3394 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BN117_3394 PF03725 3' exoribonuclease family, domain 2 BN117_3394 PF00013 KH domain BN117_3395 PF00312 Ribosomal protein S15 BN117_3397 PF01066 CDP-alcohol phosphatidyltransferase BN117_3398 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BN117_3398 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BN117_3399 PF10369 Small subunit of acetolactate synthase BN117_3400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_3400 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_3400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_3403 PF03883 Peroxide stress protein YaaA BN117_3404 PF00106 short chain dehydrogenase BN117_3405 PF00999 Sodium/hydrogen exchanger family BN117_3405 PF02254 TrkA-N domain BN117_3406 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_3406 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_3406 PF01610 Transposase BN117_3407 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BN117_3409 PF06276 Ferric iron reductase FhuF-like transporter BN117_3409 PF04183 IucA / IucC family BN117_3413 PF07690 Major Facilitator Superfamily BN117_3414 PF00593 TonB dependent receptor BN117_3414 PF07660 Secretin and TonB N terminus short domain BN117_3414 PF07715 TonB-dependent Receptor Plug Domain BN117_3416 PF00990 Diguanylate cyclase, GGDEF domain BN117_3416 PF17151 Periplasmic sensor domain BN117_3420 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_3420 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_3420 PF01610 Transposase BN117_3421 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BN117_3421 PF02142 MGS-like domain BN117_3421 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN117_3422 PF00117 Glutamine amidotransferase class-I BN117_3422 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BN117_3423 PF00923 Transaldolase/Fructose-6-phosphate aldolase BN117_3424 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3425 PF00005 ABC transporter BN117_3427 PF02515 CoA-transferase family III BN117_3428 PF02132 RecR protein BN117_3428 PF13662 Toprim domain BN117_3429 PF02575 YbaB/EbfC DNA-binding family BN117_3430 PF12169 DNA polymerase III subunits gamma and tau domain III BN117_3430 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BN117_3430 PF12170 DNA polymerase III tau subunit V interacting with alpha BN117_3431 PF12705 PD-(D/E)XK nuclease superfamily BN117_3431 PF13361 UvrD-like helicase C-terminal domain BN117_3431 PF00580 UvrD/REP helicase N-terminal domain BN117_3433 PF07690 Major Facilitator Superfamily BN117_3435 PF00768 D-alanyl-D-alanine carboxypeptidase BN117_3439 PF02899 Phage integrase, N-terminal SAM-like domain BN117_3439 PF00589 Phage integrase family BN117_3441 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_3441 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_3441 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_3442 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_3442 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_3442 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_3445 PF00005 ABC transporter BN117_3446 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3447 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_3448 PF00491 Arginase family BN117_3449 PF09339 IclR helix-turn-helix domain BN117_3449 PF01614 Bacterial transcriptional regulator BN117_3450 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_3451 PF03481 Putative GTP-binding controlling metal-binding BN117_3451 PF01300 Telomere recombination BN117_3452 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BN117_3452 PF02222 ATP-grasp domain BN117_3453 PF00731 AIR carboxylase BN117_3454 PF02600 Disulfide bond formation protein DsbB BN117_3458 PF01259 SAICAR synthetase BN117_3460 PF01116 Fructose-bisphosphate aldolase class-II BN117_3463 PF03069 Acetamidase/Formamidase family BN117_3464 PF02293 AmiS/UreI family transporter BN117_3466 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN117_3466 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN117_3468 PF01176 Translation initiation factor 1A / IF-1 BN117_3470 PF08525 Opacity-associated protein A N-terminal motif BN117_3470 PF01476 LysM domain BN117_3470 PF01551 Peptidase family M23 BN117_3472 PF00994 Probable molybdopterin binding domain BN117_3473 PF01384 Phosphate transporter family BN117_3475 PF03591 AzlC protein BN117_3477 PF01556 DnaJ C terminal domain BN117_3477 PF00226 DnaJ domain BN117_3481 PF14834 Glutathione S-transferase, C-terminal domain BN117_3481 PF02798 Glutathione S-transferase, N-terminal domain BN117_3482 PF11339 Protein of unknown function (DUF3141) BN117_3483 PF01515 Phosphate acetyl/butaryl transferase BN117_3484 PF00871 Acetokinase family BN117_3486 PF00162 Phosphoglycerate kinase BN117_3487 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BN117_3487 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BN117_3488 PF02779 Transketolase, pyrimidine binding domain BN117_3488 PF02780 Transketolase, C-terminal domain BN117_3488 PF00456 Transketolase, thiamine diphosphate binding domain BN117_3489 PF04452 RNA methyltransferase BN117_3490 PF01337 Barstar (barnase inhibitor) BN117_3492 PF01515 Phosphate acetyl/butaryl transferase BN117_3492 PF00390 Malic enzyme, N-terminal domain BN117_3492 PF03949 Malic enzyme, NAD binding domain BN117_3494 PF00155 Aminotransferase class I and II BN117_3495 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BN117_3495 PF01464 Transglycosylase SLT domain BN117_3496 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BN117_3501 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BN117_3501 PF10414 Sirohaem synthase dimerisation region BN117_3501 PF14824 Sirohaem biosynthesis protein central BN117_3502 PF03797 Autotransporter beta-domain BN117_3502 PF03212 Pertactin BN117_3504 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BN117_3505 PF02547 Queuosine biosynthesis protein BN117_3506 PF01702 Queuine tRNA-ribosyltransferase BN117_3507 PF02699 Preprotein translocase subunit BN117_3508 PF13721 SecD export protein N-terminal TM region BN117_3508 PF02355 Protein export membrane protein BN117_3508 PF07549 SecD/SecF GG Motif BN117_3509 PF07549 SecD/SecF GG Motif BN117_3509 PF02355 Protein export membrane protein BN117_3511 PF00919 Uncharacterized protein family UPF0004 BN117_3511 PF04055 Radical SAM superfamily BN117_3511 PF01938 TRAM domain BN117_3512 PF02562 PhoH-like protein BN117_3513 PF02130 Uncharacterized protein family UPF0054 BN117_3514 PF03471 Transporter associated domain BN117_3514 PF00571 CBS domain BN117_3515 PF00795 Carbon-nitrogen hydrolase BN117_3516 PF00248 Aldo/keto reductase family BN117_3517 PF00392 Bacterial regulatory proteins, gntR family BN117_3517 PF07729 FCD domain BN117_3519 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3521 PF14537 Cytochrome c3 BN117_3521 PF00890 FAD binding domain BN117_3522 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3524 PF00857 Isochorismatase family BN117_3525 PF01979 Amidohydrolase family BN117_3531 PF06968 Biotin and Thiamin Synthesis associated domain BN117_3531 PF04055 Radical SAM superfamily BN117_3534 PF08534 Redoxin BN117_3536 PF01738 Dienelactone hydrolase family BN117_3538 PF01967 MoaC family BN117_3539 PF02597 ThiS family BN117_3540 PF02391 MoaE protein BN117_3541 PF00994 Probable molybdopterin binding domain BN117_3542 PF03453 MoeA N-terminal region (domain I and II) BN117_3542 PF00994 Probable molybdopterin binding domain BN117_3542 PF03454 MoeA C-terminal region (domain IV) BN117_3543 PF04055 Radical SAM superfamily BN117_3543 PF06463 Molybdenum Cofactor Synthesis C BN117_3546 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BN117_3546 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BN117_3546 PF00037 4Fe-4S binding domain BN117_3547 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BN117_3547 PF12838 4Fe-4S dicluster domain BN117_3547 PF00384 Molybdopterin oxidoreductase BN117_3547 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BN117_3547 PF01568 Molydopterin dinucleotide binding domain BN117_3548 PF02634 FdhD/NarQ family BN117_3550 PF05175 Methyltransferase small domain BN117_3553 PF00582 Universal stress protein family BN117_3554 PF00892 EamA-like transporter family BN117_3555 PF00291 Pyridoxal-phosphate dependent enzyme BN117_3557 PF07690 Major Facilitator Superfamily BN117_3557 PF00083 Sugar (and other) transporter BN117_3558 PF06481 COX Aromatic Rich Motif BN117_3558 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BN117_3559 PF00115 Cytochrome C and Quinol oxidase polypeptide I BN117_3560 PF00510 Cytochrome c oxidase subunit III BN117_3561 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BN117_3562 PF02104 SURF1 family BN117_3566 PF08281 Sigma-70, region 4 BN117_3566 PF04542 Sigma-70 region 2 BN117_3568 PF04461 Protein of unknown function (DUF520) BN117_3571 PF01551 Peptidase family M23 BN117_3571 PF01476 LysM domain BN117_3574 PF00593 TonB dependent receptor BN117_3574 PF07715 TonB-dependent Receptor Plug Domain BN117_3577 PF05114 Protein of unknown function (DUF692) BN117_3580 PF07690 Major Facilitator Superfamily BN117_3581 PF01022 Bacterial regulatory protein, arsR family BN117_3582 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BN117_3583 PF00510 Cytochrome c oxidase subunit III BN117_3584 PF00115 Cytochrome C and Quinol oxidase polypeptide I BN117_3585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BN117_3585 PF06481 COX Aromatic Rich Motif BN117_3586 PF00072 Response regulator receiver domain BN117_3589 PF02678 Pirin BN117_3589 PF05726 Pirin C-terminal cupin domain BN117_3591 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3591 PF03466 LysR substrate binding domain BN117_3593 PF02515 CoA-transferase family III BN117_3594 PF03466 LysR substrate binding domain BN117_3594 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3595 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3597 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_3597 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_3597 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_3600 PF00585 C-terminal regulatory domain of Threonine dehydratase BN117_3600 PF00291 Pyridoxal-phosphate dependent enzyme BN117_3601 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BN117_3602 PF04102 SlyX BN117_3603 PF03976 Polyphosphate kinase 2 (PPK2) BN117_3606 PF02311 AraC-like ligand binding domain BN117_3606 PF12833 Helix-turn-helix domain BN117_3608 PF03466 LysR substrate binding domain BN117_3608 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3609 PF03060 Nitronate monooxygenase BN117_3611 PF02585 GlcNAc-PI de-N-acetylase BN117_3612 PF03737 Aldolase/RraA BN117_3613 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3614 PF00962 Adenosine/AMP deaminase BN117_3620 PF00004 ATPase family associated with various cellular activities (AAA) BN117_3620 PF05362 Lon protease (S16) C-terminal proteolytic domain BN117_3620 PF02190 ATP-dependent protease La (LON) substrate-binding domain BN117_3621 PF00561 alpha/beta hydrolase fold BN117_3623 PF13247 4Fe-4S dicluster domain BN117_3627 PF00155 Aminotransferase class I and II BN117_3627 PF00392 Bacterial regulatory proteins, gntR family BN117_3629 PF02322 Cytochrome bd terminal oxidase subunit II BN117_3630 PF01654 Cytochrome bd terminal oxidase subunit I BN117_3632 PF18029 Glyoxalase-like domain BN117_3634 PF12833 Helix-turn-helix domain BN117_3634 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BN117_3634 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BN117_3634 PF02805 Metal binding domain of Ada BN117_3639 PF01323 DSBA-like thioredoxin domain BN117_3640 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_3642 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BN117_3642 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BN117_3643 PF01425 Amidase BN117_3644 PF01909 Nucleotidyltransferase domain BN117_3644 PF13427 Domain of unknown function (DUF4111) BN117_3649 PF03466 LysR substrate binding domain BN117_3649 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3650 PF00378 Enoyl-CoA hydratase/isomerase BN117_3651 PF02515 CoA-transferase family III BN117_3652 PF00171 Aldehyde dehydrogenase family BN117_3653 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_3653 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_3653 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_3654 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3657 PF02627 Carboxymuconolactone decarboxylase family BN117_3659 PF03466 LysR substrate binding domain BN117_3659 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3660 PF00672 HAMP domain BN117_3660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BN117_3660 PF02203 Tar ligand binding domain homologue BN117_3671 PF01734 Patatin-like phospholipase BN117_3672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3672 PF03466 LysR substrate binding domain BN117_3674 PF00440 Bacterial regulatory proteins, tetR family BN117_3675 PF00893 Small Multidrug Resistance protein BN117_3677 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_3677 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_3677 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_3678 PF17932 Tetracyclin repressor-like, C-terminal domain BN117_3678 PF00440 Bacterial regulatory proteins, tetR family BN117_3680 PF02515 CoA-transferase family III BN117_3681 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3682 PF02040 Arsenical pump membrane protein BN117_3685 PF02321 Outer membrane efflux protein BN117_3687 PF03412 Peptidase C39 family BN117_3687 PF00664 ABC transporter transmembrane region BN117_3687 PF00005 ABC transporter BN117_3688 PF00529 HlyD membrane-fusion protein of T1SS BN117_3688 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BN117_3693 PF00857 Isochorismatase family BN117_3694 PF00155 Aminotransferase class I and II BN117_3695 PF01966 HD domain BN117_3696 PF00403 Heavy-metal-associated domain BN117_3699 PF00107 Zinc-binding dehydrogenase BN117_3699 PF08240 Alcohol dehydrogenase GroES-like domain BN117_3702 PF00005 ABC transporter BN117_3703 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3705 PF00501 AMP-binding enzyme BN117_3705 PF13193 AMP-binding enzyme C-terminal domain BN117_3707 PF13404 AsnC-type helix-turn-helix domain BN117_3707 PF01037 Lrp/AsnC ligand binding domain BN117_3709 PF00677 Lumazine binding domain BN117_3710 PF07690 Major Facilitator Superfamily BN117_3711 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN117_3714 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BN117_3715 PF00005 ABC transporter BN117_3716 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_3716 PF00005 ABC transporter BN117_3718 PF02653 Branched-chain amino acid transport system / permease component BN117_3719 PF01042 Endoribonuclease L-PSP BN117_3720 PF13193 AMP-binding enzyme C-terminal domain BN117_3720 PF16177 Acetyl-coenzyme A synthetase N-terminus BN117_3720 PF00501 AMP-binding enzyme BN117_3723 PF09339 IclR helix-turn-helix domain BN117_3723 PF01614 Bacterial transcriptional regulator BN117_3726 PF00005 ABC transporter BN117_3729 PF00378 Enoyl-CoA hydratase/isomerase BN117_3730 PF02515 CoA-transferase family III BN117_3733 PF02627 Carboxymuconolactone decarboxylase family BN117_3734 PF01053 Cys/Met metabolism PLP-dependent enzyme BN117_3735 PF03466 LysR substrate binding domain BN117_3735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3736 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BN117_3738 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN117_3738 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN117_3738 PF01842 ACT domain BN117_3739 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_3740 PF08450 SMP-30/Gluconolactonase/LRE-like region BN117_3741 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3743 PF00155 Aminotransferase class I and II BN117_3744 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3745 PF08402 TOBE domain BN117_3745 PF00005 ABC transporter BN117_3748 PF02515 CoA-transferase family III BN117_3749 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3750 PF00378 Enoyl-CoA hydratase/isomerase BN117_3751 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3751 PF03466 LysR substrate binding domain BN117_3752 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3752 PF03466 LysR substrate binding domain BN117_3754 PF07005 Sugar-binding N-terminal domain BN117_3754 PF17042 Nucleotide-binding C-terminal domain BN117_3755 PF03328 HpcH/HpaI aldolase/citrate lyase family BN117_3757 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN117_3757 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BN117_3758 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3759 PF00378 Enoyl-CoA hydratase/isomerase BN117_3760 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3761 PF03466 LysR substrate binding domain BN117_3761 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3763 PF00884 Sulfatase BN117_3764 PF03466 LysR substrate binding domain BN117_3764 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3768 PF03466 LysR substrate binding domain BN117_3768 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3770 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3772 PF00330 Aconitase family (aconitate hydratase) BN117_3773 PF00694 Aconitase C-terminal domain BN117_3774 PF00180 Isocitrate/isopropylmalate dehydrogenase BN117_3776 PF02423 Ornithine cyclodeaminase/mu-crystallin family BN117_3777 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3777 PF03466 LysR substrate binding domain BN117_3778 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase BN117_3780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_3781 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3781 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_3782 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3783 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_3783 PF00005 ABC transporter BN117_3784 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3784 PF03466 LysR substrate binding domain BN117_3786 PF13193 AMP-binding enzyme C-terminal domain BN117_3786 PF00501 AMP-binding enzyme BN117_3787 PF00378 Enoyl-CoA hydratase/isomerase BN117_3787 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_3787 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_3788 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3788 PF03466 LysR substrate binding domain BN117_3790 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3791 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_3791 PF01610 Transposase BN117_3791 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_3793 PF00005 ABC transporter BN117_3793 PF08402 TOBE domain BN117_3795 PF01266 FAD dependent oxidoreductase BN117_3797 PF04324 BFD-like [2Fe-2S] binding domain BN117_3797 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_3798 PF00990 Diguanylate cyclase, GGDEF domain BN117_3798 PF08448 PAS fold BN117_3799 PF03466 LysR substrate binding domain BN117_3799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3800 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3801 PF07171 MlrC C-terminus BN117_3801 PF07364 Metallopeptidase family M81 BN117_3803 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3805 PF03466 LysR substrate binding domain BN117_3805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3806 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3807 PF02515 CoA-transferase family III BN117_3808 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_3808 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_3808 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_3810 PF00582 Universal stress protein family BN117_3814 PF00857 Isochorismatase family BN117_3815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BN117_3815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN117_3817 PF09339 IclR helix-turn-helix domain BN117_3817 PF01614 Bacterial transcriptional regulator BN117_3818 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3819 PF00890 FAD binding domain BN117_3820 PF03466 LysR substrate binding domain BN117_3820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3822 PF00890 FAD binding domain BN117_3826 PF00166 Chaperonin 10 Kd subunit BN117_3827 PF00118 TCP-1/cpn60 chaperonin family BN117_3828 PF01610 Transposase BN117_3828 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_3828 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_3829 PF00892 EamA-like transporter family BN117_3831 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BN117_3831 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BN117_3832 PF02525 Flavodoxin-like fold BN117_3833 PF03466 LysR substrate binding domain BN117_3833 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3836 PF00512 His Kinase A (phospho-acceptor) domain BN117_3836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_3837 PF00072 Response regulator receiver domain BN117_3837 PF00486 Transcriptional regulatory protein, C terminal BN117_3838 PF00293 NUDIX domain BN117_3839 PF03129 Anticodon binding domain BN117_3839 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BN117_3839 PF04073 Aminoacyl-tRNA editing domain BN117_3840 PF03061 Thioesterase superfamily BN117_3841 PF01618 MotA/TolQ/ExbB proton channel family BN117_3842 PF02472 Biopolymer transport protein ExbD/TolR BN117_3844 PF04052 TolB amino-terminal domain BN117_3844 PF07676 WD40-like Beta Propeller Repeat BN117_3845 PF00691 OmpA family BN117_3847 PF01032 FecCD transport family BN117_3848 PF00005 ABC transporter BN117_3851 PF01047 MarR family BN117_3852 PF01266 FAD dependent oxidoreductase BN117_3855 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3856 PF00501 AMP-binding enzyme BN117_3856 PF13193 AMP-binding enzyme C-terminal domain BN117_3859 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_3859 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_3859 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_3860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3860 PF03466 LysR substrate binding domain BN117_3861 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3862 PF00378 Enoyl-CoA hydratase/isomerase BN117_3863 PF02515 CoA-transferase family III BN117_3864 PF03741 Integral membrane protein TerC family BN117_3864 PF03471 Transporter associated domain BN117_3865 PF02308 MgtC family BN117_3866 PF00679 Elongation factor G C-terminus BN117_3866 PF00009 Elongation factor Tu GTP binding domain BN117_3866 PF14492 Elongation Factor G, domain II BN117_3866 PF03144 Elongation factor Tu domain 2 BN117_3866 PF03764 Elongation factor G, domain IV BN117_3867 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_3867 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_3867 PF01610 Transposase BN117_3868 PF00582 Universal stress protein family BN117_3870 PF00155 Aminotransferase class I and II BN117_3870 PF00392 Bacterial regulatory proteins, gntR family BN117_3871 PF00892 EamA-like transporter family BN117_3872 PF01810 LysE type translocator BN117_3873 PF12146 Serine aminopeptidase, S33 BN117_3876 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BN117_3877 PF00535 Glycosyl transferase family 2 BN117_3879 PF03616 Sodium/glutamate symporter BN117_3881 PF02667 Short chain fatty acid transporter BN117_3883 PF00929 Exonuclease BN117_3884 PF00873 AcrB/AcrD/AcrF family BN117_3885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BN117_3886 PF00075 RNase H BN117_3887 PF08241 Methyltransferase domain BN117_3888 PF00753 Metallo-beta-lactamase superfamily BN117_3888 PF16123 Hydroxyacylglutathione hydrolase C-terminus BN117_3889 PF01464 Transglycosylase SLT domain BN117_3889 PF01476 LysM domain BN117_3892 PF04391 Protein of unknown function (DUF533) BN117_3893 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3894 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BN117_3894 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BN117_3897 PF00355 Rieske [2Fe-2S] domain BN117_3899 PF02653 Branched-chain amino acid transport system / permease component BN117_3903 PF13458 Periplasmic binding protein BN117_3904 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_3904 PF03466 LysR substrate binding domain BN117_3906 PF01425 Amidase BN117_3907 PF09297 NADH pyrophosphatase zinc ribbon domain BN117_3907 PF00293 NUDIX domain BN117_3908 PF00440 Bacterial regulatory proteins, tetR family BN117_3909 PF02515 CoA-transferase family III BN117_3910 PF14765 Polyketide synthase dehydratase BN117_3910 PF08990 Erythronolide synthase docking BN117_3910 PF16197 Ketoacyl-synthetase C-terminal extension BN117_3910 PF00109 Beta-ketoacyl synthase, N-terminal domain BN117_3910 PF02801 Beta-ketoacyl synthase, C-terminal domain BN117_3910 PF08659 KR domain BN117_3910 PF00550 Phosphopantetheine attachment site BN117_3910 PF08240 Alcohol dehydrogenase GroES-like domain BN117_3910 PF00698 Acyl transferase domain BN117_3911 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3912 PF00378 Enoyl-CoA hydratase/isomerase BN117_3913 PF00005 ABC transporter BN117_3915 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3916 PF00392 Bacterial regulatory proteins, gntR family BN117_3916 PF07702 UTRA domain BN117_3918 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3919 PF07702 UTRA domain BN117_3919 PF00392 Bacterial regulatory proteins, gntR family BN117_3921 PF00884 Sulfatase BN117_3921 PF12411 Choline sulfatase enzyme C terminal BN117_3922 PF00732 GMC oxidoreductase BN117_3922 PF05199 GMC oxidoreductase BN117_3923 PF00175 Oxidoreductase NAD-binding domain BN117_3923 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_3924 PF00355 Rieske [2Fe-2S] domain BN117_3925 PF00171 Aldehyde dehydrogenase family BN117_3926 PF02492 CobW/HypB/UreG, nucleotide-binding domain BN117_3927 PF01730 UreF BN117_3928 PF02814 UreE urease accessory protein, N-terminal domain BN117_3928 PF05194 UreE urease accessory protein, C-terminal domain BN117_3929 PF01979 Amidohydrolase family BN117_3929 PF00449 Urease alpha-subunit, N-terminal domain BN117_3930 PF00699 Urease beta subunit BN117_3931 PF04955 HupE / UreJ protein BN117_3932 PF00547 Urease, gamma subunit BN117_3933 PF01774 UreD urease accessory protein BN117_3934 PF00376 MerR family regulatory protein BN117_3934 PF09278 MerR, DNA binding BN117_3937 PF07702 UTRA domain BN117_3937 PF00392 Bacterial regulatory proteins, gntR family BN117_3938 PF05034 Methylaspartate ammonia-lyase N-terminus BN117_3938 PF07476 Methylaspartate ammonia-lyase C-terminus BN117_3939 PF03401 Tripartite tricarboxylate transporter family receptor BN117_3942 PF04293 SpoVR like protein BN117_3943 PF04285 Protein of unknown function (DUF444) BN117_3944 PF08298 PrkA AAA domain BN117_3944 PF06798 PrkA serine protein kinase C-terminal domain BN117_3945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BN117_3945 PF01872 RibD C-terminal domain BN117_3948 PF03477 ATP cone domain BN117_3949 PF00464 Serine hydroxymethyltransferase BN117_3951 PF00579 tRNA synthetases class I (W and Y) BN117_3951 PF01479 S4 domain BN117_3952 PF08460 Bacterial SH3 domain BN117_3952 PF01551 Peptidase family M23 BN117_3953 PF03702 Anhydro-N-acetylmuramic acid kinase BN117_3954 PF01521 Iron-sulphur cluster biosynthesis BN117_3956 PF01118 Semialdehyde dehydrogenase, NAD binding domain BN117_3956 PF02774 Semialdehyde dehydrogenase, dimerisation domain BN117_3957 PF00380 Ribosomal protein S9/S16 BN117_3958 PF00572 Ribosomal protein L13 BN117_3959 PF03480 Bacterial extracellular solute-binding protein, family 7 BN117_3960 PF01523 Putative modulator of DNA gyrase BN117_3961 PF04751 Protein of unknown function (DUF615) BN117_3962 PF02230 Phospholipase/Carboxylesterase BN117_3964 PF00005 ABC transporter BN117_3965 PF00528 Binding-protein-dependent transport system inner membrane component BN117_3966 PF00857 Isochorismatase family BN117_3967 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BN117_3968 PF00270 DEAD/DEAH box helicase BN117_3968 PF03880 DbpA RNA binding domain BN117_3968 PF00271 Helicase conserved C-terminal domain BN117_3970 PF00392 Bacterial regulatory proteins, gntR family BN117_3970 PF07729 FCD domain BN117_3971 PF13607 Succinyl-CoA ligase like flavodoxin domain BN117_3971 PF13380 CoA binding domain BN117_3971 PF00583 Acetyltransferase (GNAT) family BN117_3972 PF00749 tRNA synthetases class I (E and Q), catalytic domain BN117_3977 PF00317 Ribonucleotide reductase, all-alpha domain BN117_3977 PF03477 ATP cone domain BN117_3977 PF02867 Ribonucleotide reductase, barrel domain BN117_3978 PF00268 Ribonucleotide reductase, small chain BN117_3981 PF13193 AMP-binding enzyme C-terminal domain BN117_3981 PF00501 AMP-binding enzyme BN117_3982 PF03062 MBOAT, membrane-bound O-acyltransferase family BN117_3987 PF00294 pfkB family carbohydrate kinase BN117_3990 PF02785 Biotin carboxylase C-terminal domain BN117_3990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BN117_3990 PF00289 Biotin carboxylase, N-terminal domain BN117_3991 PF00364 Biotin-requiring enzyme BN117_3992 PF01220 Dehydroquinase class II BN117_3993 PF08534 Redoxin BN117_3994 PF01225 Mur ligase family, catalytic domain BN117_3994 PF02875 Mur ligase family, glutamate ligase domain BN117_3994 PF08245 Mur ligase middle domain BN117_3995 PF05728 Uncharacterised protein family (UPF0227) BN117_3996 PF00773 RNB domain BN117_3998 PF08501 Shikimate dehydrogenase substrate binding domain BN117_3998 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BN117_3998 PF01488 Shikimate / quinate 5-dehydrogenase BN117_3999 PF00912 Transglycosylase BN117_4001 PF00149 Calcineurin-like phosphoesterase BN117_4002 PF01553 Acyltransferase BN117_4003 PF01979 Amidohydrolase family BN117_4004 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BN117_4004 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BN117_4005 PF03652 Holliday junction resolvase BN117_4006 PF02622 Uncharacterized ACR, COG1678 BN117_4007 PF00301 Rubredoxin BN117_4008 PF08543 Phosphomethylpyrimidine kinase BN117_4009 PF02581 Thiamine monophosphate synthase BN117_4010 PF00202 Aminotransferase class-III BN117_4014 PF13193 AMP-binding enzyme C-terminal domain BN117_4014 PF00501 AMP-binding enzyme BN117_4015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_4015 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_4015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_4016 PF00378 Enoyl-CoA hydratase/isomerase BN117_4017 PF00106 short chain dehydrogenase BN117_4018 PF01494 FAD binding domain BN117_4019 PF00005 ABC transporter BN117_4020 PF00005 ABC transporter BN117_4020 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_4021 PF11862 Domain of unknown function (DUF3382) BN117_4021 PF02653 Branched-chain amino acid transport system / permease component BN117_4022 PF02653 Branched-chain amino acid transport system / permease component BN117_4024 PF07859 alpha/beta hydrolase fold BN117_4027 PF01960 ArgJ family BN117_4029 PF00293 NUDIX domain BN117_4030 PF02321 Outer membrane efflux protein BN117_4031 PF00873 AcrB/AcrD/AcrF family BN117_4032 PF00873 AcrB/AcrD/AcrF family BN117_4033 PF13533 Biotin-lipoyl like BN117_4034 PF07072 Cell division protein BN117_4035 PF01121 Dephospho-CoA kinase BN117_4036 PF06750 Bacterial Peptidase A24 N-terminal domain BN117_4036 PF01478 Type IV leader peptidase family BN117_4039 PF02569 Pantoate-beta-alanine ligase BN117_4040 PF02616 Segregation and condensation protein ScpA BN117_4042 PF07690 Major Facilitator Superfamily BN117_4043 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BN117_4043 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BN117_4045 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4046 PF00005 ABC transporter BN117_4047 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4048 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4049 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_4050 PF00005 ABC transporter BN117_4051 PF18075 FtsX extracellular domain BN117_4052 PF03975 CheD chemotactic sensory transduction BN117_4054 PF00633 Helix-hairpin-helix motif BN117_4054 PF10576 Iron-sulfur binding domain of endonuclease III BN117_4054 PF14815 NUDIX domain BN117_4054 PF00730 HhH-GPD superfamily base excision DNA repair protein BN117_4056 PF08241 Methyltransferase domain BN117_4057 PF02607 B12 binding domain BN117_4057 PF00809 Pterin binding enzyme BN117_4057 PF02310 B12 binding domain BN117_4057 PF02965 Vitamin B12 dependent methionine synthase, activation domain BN117_4057 PF02574 Homocysteine S-methyltransferase BN117_4058 PF07715 TonB-dependent Receptor Plug Domain BN117_4058 PF00593 TonB dependent receptor BN117_4059 PF01497 Periplasmic binding protein BN117_4060 PF05690 Thiazole biosynthesis protein ThiG BN117_4061 PF08543 Phosphomethylpyrimidine kinase BN117_4064 PF01467 Cytidylyltransferase-like BN117_4066 PF03109 ABC1 family BN117_4069 PF01209 ubiE/COQ5 methyltransferase family BN117_4070 PF00486 Transcriptional regulatory protein, C terminal BN117_4070 PF00072 Response regulator receiver domain BN117_4071 PF11808 Phosphate regulon sensor protein PhoR BN117_4071 PF00989 PAS fold BN117_4071 PF00512 His Kinase A (phospho-acceptor) domain BN117_4071 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_4072 PF00486 Transcriptional regulatory protein, C terminal BN117_4072 PF00072 Response regulator receiver domain BN117_4073 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_4073 PF00512 His Kinase A (phospho-acceptor) domain BN117_4073 PF00672 HAMP domain BN117_4075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN117_4075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN117_4075 PF01842 ACT domain BN117_4076 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4076 PF03466 LysR substrate binding domain BN117_4078 PF02682 Carboxyltransferase domain, subdomain C and D BN117_4079 PF02626 Carboxyltransferase domain, subdomain A and B BN117_4080 PF03746 LamB/YcsF family BN117_4082 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4083 PF01494 FAD binding domain BN117_4084 PF00378 Enoyl-CoA hydratase/isomerase BN117_4085 PF07859 alpha/beta hydrolase fold BN117_4086 PF02515 CoA-transferase family III BN117_4087 PF07729 FCD domain BN117_4087 PF00392 Bacterial regulatory proteins, gntR family BN117_4090 PF00291 Pyridoxal-phosphate dependent enzyme BN117_4090 PF00585 C-terminal regulatory domain of Threonine dehydratase BN117_4091 PF13609 Gram-negative porin BN117_4093 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4093 PF03466 LysR substrate binding domain BN117_4094 PF00156 Phosphoribosyl transferase domain BN117_4095 PF00664 ABC transporter transmembrane region BN117_4095 PF00005 ABC transporter BN117_4096 PF00005 ABC transporter BN117_4096 PF00664 ABC transporter transmembrane region BN117_4097 PF08173 Membrane bound YbgT-like protein BN117_4098 PF02322 Cytochrome bd terminal oxidase subunit II BN117_4099 PF01654 Cytochrome bd terminal oxidase subunit I BN117_4101 PF02222 ATP-grasp domain BN117_4101 PF01370 NAD dependent epimerase/dehydratase family BN117_4102 PF00571 CBS domain BN117_4102 PF01380 SIS domain BN117_4106 PF00005 ABC transporter BN117_4107 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BN117_4108 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BN117_4109 PF07475 HPr Serine kinase C-terminal domain BN117_4109 PF02603 HPr Serine kinase N terminus BN117_4112 PF03668 P-loop ATPase protein family BN117_4113 PF03330 Lytic transglycolase BN117_4113 PF05036 Sporulation related domain BN117_4114 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BN117_4114 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BN117_4115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BN117_4116 PF02021 Uncharacterised protein family UPF0102 BN117_4117 PF13580 SIS domain BN117_4118 PF04972 BON domain BN117_4119 PF00578 AhpC/TSA family BN117_4120 PF03180 NLPA lipoprotein BN117_4121 PF00696 Amino acid kinase family BN117_4123 PF00440 Bacterial regulatory proteins, tetR family BN117_4124 PF00939 Sodium:sulfate symporter transmembrane region BN117_4125 PF02615 Malate/L-lactate dehydrogenase BN117_4126 PF01098 Cell cycle protein BN117_4127 PF03717 Penicillin-binding Protein dimerisation domain BN117_4127 PF00905 Penicillin binding protein transpeptidase domain BN117_4129 PF04085 rod shape-determining protein MreC BN117_4131 PF02686 Glu-tRNAGln amidotransferase C subunit BN117_4132 PF01425 Amidase BN117_4133 PF02934 GatB/GatE catalytic domain BN117_4133 PF02637 GatB domain BN117_4134 PF00156 Phosphoribosyl transferase domain BN117_4135 PF03372 Endonuclease/Exonuclease/phosphatase family BN117_4136 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BN117_4136 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BN117_4137 PF03458 UPF0126 domain BN117_4139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4139 PF03466 LysR substrate binding domain BN117_4140 PF00180 Isocitrate/isopropylmalate dehydrogenase BN117_4141 PF00934 PE family BN117_4141 PF01436 NHL repeat BN117_4143 PF00486 Transcriptional regulatory protein, C terminal BN117_4143 PF00072 Response regulator receiver domain BN117_4144 PF00512 His Kinase A (phospho-acceptor) domain BN117_4144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_4144 PF00672 HAMP domain BN117_4146 PF00291 Pyridoxal-phosphate dependent enzyme BN117_4147 PF00497 Bacterial extracellular solute-binding proteins, family 3 BN117_4148 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4149 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4150 PF00005 ABC transporter BN117_4151 PF01177 Asp/Glu/Hydantoin racemase BN117_4152 PF13609 Gram-negative porin BN117_4153 PF07690 Major Facilitator Superfamily BN117_4154 PF00561 alpha/beta hydrolase fold BN117_4154 PF07021 Methionine biosynthesis protein MetW BN117_4155 PF00561 alpha/beta hydrolase fold BN117_4156 PF02615 Malate/L-lactate dehydrogenase BN117_4160 PF00561 alpha/beta hydrolase fold BN117_4161 PF04262 Glutamate-cysteine ligase BN117_4164 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4165 PF03466 LysR substrate binding domain BN117_4165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4166 PF02548 Ketopantoate hydroxymethyltransferase BN117_4167 PF13609 Gram-negative porin BN117_4168 PF00356 Bacterial regulatory proteins, lacI family BN117_4171 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_4171 PF00005 ABC transporter BN117_4172 PF00005 ABC transporter BN117_4173 PF13458 Periplasmic binding protein BN117_4174 PF01425 Amidase BN117_4175 PF05995 Cysteine dioxygenase type I BN117_4176 PF01614 Bacterial transcriptional regulator BN117_4176 PF09339 IclR helix-turn-helix domain BN117_4178 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_4178 PF00378 Enoyl-CoA hydratase/isomerase BN117_4178 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_4179 PF05275 Copper resistance protein B precursor (CopB) BN117_4180 PF07731 Multicopper oxidase BN117_4180 PF07732 Multicopper oxidase BN117_4180 PF00394 Multicopper oxidase BN117_4182 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BN117_4183 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_4183 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_4183 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BN117_4184 PF02515 CoA-transferase family III BN117_4185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_4185 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_4185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_4188 PF00378 Enoyl-CoA hydratase/isomerase BN117_4189 PF00378 Enoyl-CoA hydratase/isomerase BN117_4190 PF01256 Carbohydrate kinase BN117_4192 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_4194 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4195 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4195 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_4196 PF00005 ABC transporter BN117_4196 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_4197 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_4197 PF00005 ABC transporter BN117_4200 PF00580 UvrD/REP helicase N-terminal domain BN117_4200 PF13361 UvrD-like helicase C-terminal domain BN117_4201 PF18074 Primosomal protein N C-terminal domain BN117_4201 PF17764 3′ DNA-binding domain (3′BD) BN117_4201 PF00271 Helicase conserved C-terminal domain BN117_4201 PF00270 DEAD/DEAH box helicase BN117_4201 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BN117_4202 PF01208 Uroporphyrinogen decarboxylase (URO-D) BN117_4204 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BN117_4205 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN117_4205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN117_4206 PF00231 ATP synthase BN117_4207 PF00306 ATP synthase alpha/beta chain, C terminal domain BN117_4207 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BN117_4207 PF02874 ATP synthase alpha/beta family, beta-barrel domain BN117_4208 PF00213 ATP synthase delta (OSCP) subunit BN117_4209 PF00430 ATP synthase B/B' CF(0) BN117_4210 PF00137 ATP synthase subunit C BN117_4211 PF00119 ATP synthase A chain BN117_4214 PF00378 Enoyl-CoA hydratase/isomerase BN117_4216 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_4218 PF01171 PP-loop family BN117_4219 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BN117_4219 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BN117_4219 PF01842 ACT domain BN117_4220 PF13098 Thioredoxin-like domain BN117_4220 PF10411 Disulfide bond isomerase protein N-terminus BN117_4221 PF01494 FAD binding domain BN117_4222 PF06725 3D domain BN117_4222 PF03562 MltA specific insert domain BN117_4223 PF04379 ApaG domain BN117_4224 PF00834 Ribulose-phosphate 3 epimerase family BN117_4225 PF13419 Haloacid dehalogenase-like hydrolase BN117_4226 PF00425 chorismate binding enzyme BN117_4226 PF04715 Anthranilate synthase component I, N terminal region BN117_4227 PF00117 Glutamine amidotransferase class-I BN117_4228 PF00591 Glycosyl transferase family, a/b domain BN117_4228 PF02885 Glycosyl transferase family, helical bundle domain BN117_4229 PF00218 Indole-3-glycerol phosphate synthase BN117_4231 PF01323 DSBA-like thioredoxin domain BN117_4233 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4233 PF03466 LysR substrate binding domain BN117_4234 PF00753 Metallo-beta-lactamase superfamily BN117_4236 PF03061 Thioesterase superfamily BN117_4241 PF00175 Oxidoreductase NAD-binding domain BN117_4241 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_4241 PF00970 Oxidoreductase FAD-binding domain BN117_4243 PF00171 Aldehyde dehydrogenase family BN117_4247 PF07729 FCD domain BN117_4247 PF00392 Bacterial regulatory proteins, gntR family BN117_4248 PF02423 Ornithine cyclodeaminase/mu-crystallin family BN117_4253 PF08281 Sigma-70, region 4 BN117_4253 PF04542 Sigma-70 region 2 BN117_4254 PF04773 FecR protein BN117_4254 PF16220 Domain of unknown function (DUF4880) BN117_4255 PF00593 TonB dependent receptor BN117_4255 PF04886 PT repeat BN117_4255 PF07715 TonB-dependent Receptor Plug Domain BN117_4256 PF05171 Haemin-degrading HemS.ChuX domain BN117_4257 PF01497 Periplasmic binding protein BN117_4258 PF01032 FecCD transport family BN117_4259 PF00005 ABC transporter BN117_4260 PF04463 Protein of unknown function (DUF523) BN117_4261 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA BN117_4262 PF13532 2OG-Fe(II) oxygenase superfamily BN117_4263 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BN117_4263 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BN117_4264 PF00990 Diguanylate cyclase, GGDEF domain BN117_4264 PF00563 EAL domain BN117_4264 PF03707 Bacterial signalling protein N terminal repeat BN117_4266 PF11737 Protein of unknown function (DUF3300) BN117_4268 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4269 PF12706 Beta-lactamase superfamily domain BN117_4271 PF00266 Aminotransferase class-V BN117_4272 PF00392 Bacterial regulatory proteins, gntR family BN117_4272 PF07729 FCD domain BN117_4274 PF00115 Cytochrome C and Quinol oxidase polypeptide I BN117_4275 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4276 PF03466 LysR substrate binding domain BN117_4276 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4278 PF02515 CoA-transferase family III BN117_4280 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4282 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4283 PF03466 LysR substrate binding domain BN117_4283 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4284 PF02615 Malate/L-lactate dehydrogenase BN117_4285 PF07729 FCD domain BN117_4285 PF00392 Bacterial regulatory proteins, gntR family BN117_4287 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BN117_4287 PF13378 Enolase C-terminal domain-like BN117_4289 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4291 PF00890 FAD binding domain BN117_4292 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BN117_4295 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_4296 PF00005 ABC transporter BN117_4297 PF00005 ABC transporter BN117_4297 PF12399 Branched-chain amino acid ATP-binding cassette transporter BN117_4299 PF13458 Periplasmic binding protein BN117_4301 PF00501 AMP-binding enzyme BN117_4301 PF13193 AMP-binding enzyme C-terminal domain BN117_4302 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_4302 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_4302 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_4303 PF02817 e3 binding domain BN117_4303 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BN117_4303 PF00364 Biotin-requiring enzyme BN117_4304 PF00378 Enoyl-CoA hydratase/isomerase BN117_4305 PF02779 Transketolase, pyrimidine binding domain BN117_4305 PF02780 Transketolase, C-terminal domain BN117_4306 PF00676 Dehydrogenase E1 component BN117_4307 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 BN117_4307 PF13542 Helix-turn-helix domain of transposase family ISL3 BN117_4307 PF01610 Transposase BN117_4308 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4311 PF02515 CoA-transferase family III BN117_4312 PF02803 Thiolase, C-terminal domain BN117_4312 PF00108 Thiolase, N-terminal domain BN117_4313 PF01575 MaoC like domain BN117_4314 PF02515 CoA-transferase family III BN117_4317 PF12697 Alpha/beta hydrolase family BN117_4318 PF00111 2Fe-2S iron-sulfur cluster binding domain BN117_4318 PF00175 Oxidoreductase NAD-binding domain BN117_4319 PF00355 Rieske [2Fe-2S] domain BN117_4321 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4322 PF08402 TOBE domain BN117_4322 PF00005 ABC transporter BN117_4323 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BN117_4323 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BN117_4324 PF03737 Aldolase/RraA BN117_4327 PF01958 Domain of unknown function DUF108 BN117_4327 PF03447 Homoserine dehydrogenase, NAD binding domain BN117_4328 PF03466 LysR substrate binding domain BN117_4328 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4331 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4333 PF01565 FAD binding domain BN117_4333 PF09330 D-lactate dehydrogenase, membrane binding BN117_4334 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_4334 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_4334 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_4335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_4335 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_4335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_4336 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4337 PF01546 Peptidase family M20/M25/M40 BN117_4337 PF07687 Peptidase dimerisation domain BN117_4339 PF01042 Endoribonuclease L-PSP BN117_4341 PF00107 Zinc-binding dehydrogenase BN117_4341 PF08240 Alcohol dehydrogenase GroES-like domain BN117_4342 PF03466 LysR substrate binding domain BN117_4342 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4343 PF13380 CoA binding domain BN117_4343 PF13607 Succinyl-CoA ligase like flavodoxin domain BN117_4344 PF00378 Enoyl-CoA hydratase/isomerase BN117_4346 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4347 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BN117_4348 PF01380 SIS domain BN117_4349 PF01037 Lrp/AsnC ligand binding domain BN117_4350 PF02803 Thiolase, C-terminal domain BN117_4350 PF00108 Thiolase, N-terminal domain BN117_4351 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BN117_4351 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BN117_4351 PF00378 Enoyl-CoA hydratase/isomerase BN117_4352 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_4352 PF12806 Acetyl-CoA dehydrogenase C-terminal like BN117_4352 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_4352 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_4353 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4354 PF13607 Succinyl-CoA ligase like flavodoxin domain BN117_4354 PF00583 Acetyltransferase (GNAT) family BN117_4354 PF13380 CoA binding domain BN117_4357 PF01568 Molydopterin dinucleotide binding domain BN117_4357 PF00384 Molybdopterin oxidoreductase BN117_4361 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BN117_4361 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BN117_4361 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BN117_4362 PF07690 Major Facilitator Superfamily BN117_4363 PF12804 MobA-like NTP transferase domain BN117_4363 PF14602 Hexapeptide repeat of succinyl-transferase BN117_4363 PF00132 Bacterial transferase hexapeptide (six repeats) BN117_4367 PF02630 SCO1/SenC BN117_4368 PF01040 UbiA prenyltransferase family BN117_4369 PF02628 Cytochrome oxidase assembly protein BN117_4373 PF00510 Cytochrome c oxidase subunit III BN117_4376 PF00115 Cytochrome C and Quinol oxidase polypeptide I BN117_4377 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BN117_4377 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BN117_4379 PF00999 Sodium/hydrogen exchanger family BN117_4380 PF00149 Calcineurin-like phosphoesterase BN117_4381 PF04542 Sigma-70 region 2 BN117_4381 PF00140 Sigma-70 factor, region 1.2 BN117_4381 PF04545 Sigma-70, region 4 BN117_4383 PF00756 Putative esterase BN117_4384 PF08240 Alcohol dehydrogenase GroES-like domain BN117_4384 PF00107 Zinc-binding dehydrogenase BN117_4386 PF00310 Glutamine amidotransferases class-II BN117_4386 PF01645 Conserved region in glutamate synthase BN117_4386 PF04898 Glutamate synthase central domain BN117_4386 PF01493 GXGXG motif BN117_4387 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_4387 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BN117_4388 PF03922 OmpW family BN117_4389 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4390 PF00005 ABC transporter BN117_4391 PF02405 Permease MlaE BN117_4392 PF02470 MlaD protein BN117_4393 PF04333 MlaA lipoprotein BN117_4395 PF00005 ABC transporter BN117_4396 PF01061 ABC-2 type transporter BN117_4398 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BN117_4399 PF01634 ATP phosphoribosyltransferase BN117_4400 PF00815 Histidinol dehydrogenase BN117_4401 PF00155 Aminotransferase class I and II BN117_4402 PF00475 Imidazoleglycerol-phosphate dehydratase BN117_4403 PF00117 Glutamine amidotransferase class-I BN117_4404 PF00977 Histidine biosynthesis protein BN117_4405 PF00977 Histidine biosynthesis protein BN117_4406 PF01502 Phosphoribosyl-AMP cyclohydrolase BN117_4407 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BN117_4408 PF01230 HIT domain BN117_4409 PF02416 mttA/Hcf106 family BN117_4410 PF02416 mttA/Hcf106 family BN117_4411 PF00902 Sec-independent protein translocase protein (TatC) BN117_4413 PF13180 PDZ domain BN117_4414 PF01784 NIF3 (NGG1p interacting factor 3) BN117_4415 PF01741 Large-conductance mechanosensitive channel, MscL BN117_4416 PF00355 Rieske [2Fe-2S] domain BN117_4416 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BN117_4417 PF00033 Cytochrome b/b6/petB BN117_4417 PF00032 Cytochrome b(C-terminal)/b6/petD BN117_4418 PF02167 Cytochrome C1 family BN117_4419 PF02798 Glutathione S-transferase, N-terminal domain BN117_4419 PF00043 Glutathione S-transferase, C-terminal domain BN117_4420 PF04386 Stringent starvation protein B BN117_4422 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4423 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BN117_4424 PF04909 Amidohydrolase BN117_4425 PF03466 LysR substrate binding domain BN117_4425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4426 PF07992 Pyridine nucleotide-disulphide oxidoreductase BN117_4427 PF09339 IclR helix-turn-helix domain BN117_4430 PF02515 CoA-transferase family III BN117_4431 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4432 PF02515 CoA-transferase family III BN117_4435 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4436 PF02917 Pertussis toxin, subunit 1 BN117_4437 PF03440 Aerolysin/Pertussis toxin (APT) domain BN117_4437 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain BN117_4438 PF09275 Pertussis toxin S4 subunit BN117_4439 PF09276 Pertussis toxin S5 subunit BN117_4440 PF03440 Aerolysin/Pertussis toxin (APT) domain BN117_4440 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain BN117_4441 PF04956 TrbC/VIRB2 family BN117_4442 PF05101 Type IV secretory pathway, VirB3-like protein BN117_4443 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BN117_4444 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BN117_4446 PF04335 VirB8 protein BN117_4447 PF03524 Conjugal transfer protein BN117_4448 PF03743 Bacterial conjugation TrbI-like protein BN117_4449 PF00437 Type II/IV secretion system protein BN117_4450 PF00892 EamA-like transporter family BN117_4454 PF10396 GTP-binding protein TrmE N-terminus BN117_4454 PF12631 MnmE helical domain BN117_4454 PF01926 50S ribosome-binding GTPase BN117_4455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_4456 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4457 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4457 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_4458 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_4458 PF00005 ABC transporter BN117_4459 PF04536 TPM domain BN117_4461 PF00271 Helicase conserved C-terminal domain BN117_4461 PF00270 DEAD/DEAH box helicase BN117_4462 PF01810 LysE type translocator BN117_4463 PF00009 Elongation factor Tu GTP binding domain BN117_4463 PF16658 Class II release factor RF3, C-terminal domain BN117_4463 PF03144 Elongation factor Tu domain 2 BN117_4465 PF00210 Ferritin-like domain BN117_4467 PF03466 LysR substrate binding domain BN117_4467 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BN117_4469 PF04963 Sigma-54 factor, core binding domain BN117_4469 PF04552 Sigma-54, DNA binding domain BN117_4469 PF00309 Sigma-54 factor, Activator interacting domain (AID) BN117_4471 PF00682 HMGL-like BN117_4471 PF08502 LeuA allosteric (dimerisation) domain BN117_4472 PF01425 Amidase BN117_4476 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4477 PF00005 ABC transporter BN117_4477 PF12857 TOBE-like domain BN117_4478 PF00149 Calcineurin-like phosphoesterase BN117_4479 PF00005 ABC transporter BN117_4479 PF17912 MalK OB fold domain BN117_4480 PF13416 Bacterial extracellular solute-binding protein BN117_4481 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4482 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4485 PF00750 tRNA synthetases class I (R) BN117_4485 PF05746 DALR anticodon binding domain BN117_4485 PF03485 Arginyl tRNA synthetase N terminal domain BN117_4487 PF01323 DSBA-like thioredoxin domain BN117_4487 PF00085 Thioredoxin BN117_4488 PF01053 Cys/Met metabolism PLP-dependent enzyme BN117_4489 PF01810 LysE type translocator BN117_4491 PF09278 MerR, DNA binding BN117_4491 PF00376 MerR family regulatory protein BN117_4492 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BN117_4492 PF02770 Acyl-CoA dehydrogenase, middle domain BN117_4492 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BN117_4493 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BN117_4494 PF02803 Thiolase, C-terminal domain BN117_4494 PF00108 Thiolase, N-terminal domain BN117_4495 PF01039 Carboxyl transferase domain BN117_4498 PF00202 Aminotransferase class-III BN117_4499 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4500 PF14031 Putative serine dehydratase domain BN117_4500 PF01168 Alanine racemase, N-terminal domain BN117_4501 PF16868 NMT1-like family BN117_4503 PF07715 TonB-dependent Receptor Plug Domain BN117_4503 PF00593 TonB dependent receptor BN117_4504 PF04361 Protein of unknown function (DUF494) BN117_4505 PF00749 tRNA synthetases class I (E and Q), catalytic domain BN117_4507 PF01751 Toprim domain BN117_4507 PF01131 DNA topoisomerase BN117_4509 PF00005 ABC transporter BN117_4510 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4512 PF00171 Aldehyde dehydrogenase family BN117_4514 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BN117_4514 PF00205 Thiamine pyrophosphate enzyme, central domain BN117_4514 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BN117_4515 PF01037 Lrp/AsnC ligand binding domain BN117_4516 PF01062 Bestrophin, RFP-TM, chloride channel BN117_4518 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BN117_4522 PF08546 Ketopantoate reductase PanE/ApbA C terminal BN117_4522 PF02558 Ketopantoate reductase PanE/ApbA BN117_4524 PF13673 Acetyltransferase (GNAT) domain BN117_4527 PF01070 FMN-dependent dehydrogenase BN117_4528 PF00708 Acylphosphatase BN117_4529 PF03401 Tripartite tricarboxylate transporter family receptor BN117_4530 PF01425 Amidase BN117_4531 PF09339 IclR helix-turn-helix domain BN117_4531 PF01614 Bacterial transcriptional regulator BN117_4532 PF01751 Toprim domain BN117_4532 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_4532 PF18053 DNA gyrase B subunit insert domain BN117_4532 PF00204 DNA gyrase B BN117_4532 PF00986 DNA gyrase B subunit, carboxyl terminus BN117_4533 PF00712 DNA polymerase III beta subunit, N-terminal domain BN117_4533 PF02767 DNA polymerase III beta subunit, central domain BN117_4533 PF02768 DNA polymerase III beta subunit, C-terminal domain BN117_4534 PF11638 DnaA N-terminal domain BN117_4534 PF08299 Bacterial dnaA protein helix-turn-helix BN117_4534 PF00308 Bacterial dnaA protein BN117_4535 PF00468 Ribosomal protein L34 BN117_4536 PF00825 Ribonuclease P BN117_4537 PF01809 Putative membrane protein insertion efficiency factor BN117_4538 PF14849 YidC periplasmic domain BN117_4538 PF02096 60Kd inner membrane protein BN117_4539 PF06628 Catalase-related immune-responsive BN117_4539 PF00199 Catalase BN117_4540 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4541 PF00005 ABC transporter BN117_4543 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BN117_4544 PF07687 Peptidase dimerisation domain BN117_4544 PF01546 Peptidase family M20/M25/M40 BN117_4545 PF00005 ABC transporter BN117_4545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_4546 PF00005 ABC transporter BN117_4546 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BN117_4547 PF12911 N-terminal TM domain of oligopeptide transport permease C BN117_4547 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4548 PF00528 Binding-protein-dependent transport system inner membrane component BN117_4549 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BN117_4550 PF10396 GTP-binding protein TrmE N-terminus BN117_4550 PF01926 50S ribosome-binding GTPase BN117_4550 PF12631 MnmE helical domain BN117_4552 PF00486 Transcriptional regulatory protein, C terminal BN117_4552 PF00072 Response regulator receiver domain BN117_4553 PF00512 His Kinase A (phospho-acceptor) domain BN117_4553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BN117_4556 PF01970 Tripartite tricarboxylate transporter TctA family BN117_4557 PF00155 Aminotransferase class I and II BN117_4558 PF00313 'Cold-shock' DNA-binding domain BN117_p08 PF17763 Glutaminase/Asparaginase C-terminal domain BN117_p08 PF00710 Asparaginase, N-terminal