locus-tag	class	description
BN117_0001	COG0445	tRNA wobble uridine modification
BN117_0002	COG0357	Ribosomal RNA small subunit methyltransferase G
BN117_0003	COG1192	Involved in chromosome partitioning
BN117_0005	COG1475	DNA binding
BN117_0006	COG0252	asparaginase activity
BN117_0007	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BN117_0008	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BN117_0011	COG0081	regulation of translation
BN117_0012	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BN117_0013	COG0222	ribosome binding
BN117_0014	COG0085	RNA polymerase activity
BN117_0015	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BN117_0022	COG1230	cation diffusion facilitator family transporter
BN117_0024	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BN117_0025	COG0049	tRNA binding
BN117_0026	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BN117_0027	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BN117_0028	COG0051	transcription antitermination factor activity, RNA binding
BN117_0029	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BN117_0031	COG0089	rRNA binding
BN117_0032	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BN117_0034	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BN117_0035	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BN117_0036	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BN117_0037	COG0255	Belongs to the universal ribosomal protein uL29 family
BN117_0038	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BN117_0041	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BN117_0042	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BN117_0043	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BN117_0044	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BN117_0045	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BN117_0047	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BN117_0048	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BN117_0049	COG1841	ribosomal large subunit assembly
BN117_0050	COG0200	Binds to the 23S rRNA
BN117_0051	COG0201	protein transport
BN117_0052	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BN117_0053	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BN117_0054	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BN117_0055	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BN117_0056	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BN117_0057	COG0202	RNA polymerase activity
BN117_0058	COG0203	ribosomal protein L17
BN117_0059	COG0537	adenosine 5'-monophosphoramidase activity
BN117_0060	COG1324	tolerance protein
BN117_0061	COG4232	protein-disulfide reductase activity
BN117_0064	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BN117_0066	COG1333	cytochrome c biogenesis protein
BN117_0067	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BN117_0071	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BN117_0072	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BN117_0073	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BN117_0076	COG2814	Major facilitator Superfamily
BN117_0077	COG0629	single-stranded DNA binding
BN117_0084	COG0402	S-adenosylhomocysteine deaminase activity
BN117_0090	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_0096	COG2186	Transcriptional regulator
BN117_0101	COG1956	GAF domain-containing protein
BN117_0102	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BN117_0114	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BN117_0115	COG3568	Endonuclease Exonuclease Phosphatase
BN117_0116	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BN117_0120	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BN117_0122	COG0367	asparagine synthase
BN117_0126	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BN117_0127	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BN117_0136	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BN117_0138	COG1088	dTDP-glucose 4,6-dehydratase activity
BN117_0140	COG0367	asparagine synthase
BN117_0142	COG0438	transferase activity, transferring glycosyl groups
BN117_0147	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BN117_0148	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BN117_0154	COG0859	PFAM glycosyl transferase family 9
BN117_0158	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BN117_0160	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BN117_0161	COG1127	ABC transporter
BN117_0165	COG1686	Belongs to the peptidase S11 family
BN117_0168	COG0321	lipoyl(octanoyl) transferase activity
BN117_0169	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BN117_0173	COG2096	Adenosyltransferase
BN117_0175	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BN117_0178	COG0523	cobalamin synthesis protein
BN117_0179	COG0735	belongs to the Fur family
BN117_0180	COG1121	(ABC) transporter
BN117_0182	COG0803	Belongs to the bacterial solute-binding protein 9 family
BN117_0184	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BN117_0186	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BN117_0188	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BN117_0189	COG1560	Kdo2-lipid A biosynthetic process
BN117_0191	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BN117_0195	COG1950	PFAM Membrane protein of
BN117_0197	COG0583	DNA-binding transcription factor activity
BN117_0199	COG0477	Major facilitator Superfamily
BN117_0202	COG0617	tRNA 3'-terminal CCA addition
BN117_0204	COG0513	Belongs to the DEAD box helicase family
BN117_0205	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BN117_0206	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BN117_0207	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BN117_0210	COG0735	belongs to the Fur family
BN117_0214	COG0438	transferase activity, transferring glycosyl groups
BN117_0219	COG0640	Transcriptional regulator
BN117_0231	COG0583	DNA-binding transcription factor activity
BN117_0234	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BN117_0235	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BN117_0236	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_0239	COG0758	DNA mediated transformation
BN117_0240	COG1522	sequence-specific DNA binding
BN117_0242	COG0242	peptide deformylase activity
BN117_0243	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BN117_0245	COG0546	phosphoglycolate phosphatase activity
BN117_0249	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BN117_0250	COG1942	4-Oxalocrotonate Tautomerase
BN117_0251	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_0255	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
BN117_0257	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BN117_0257	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BN117_0259	COG5000	phosphorelay sensor kinase activity
BN117_0260	COG2204	response regulator
BN117_0265	COG2068	MobA-Related Protein
BN117_0267	COG3473	Maleate cis-trans isomerase
BN117_0268	COG0596	Alpha beta hydrolase
BN117_0269	COG2309	aminopeptidase activity
BN117_0270	COG1335	isochorismatase
BN117_0275	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BN117_0280	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BN117_0281	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_0285	COG2226	methyltransferase
BN117_0288	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0289	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BN117_0290	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
BN117_0291	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BN117_0292	COG1054	Belongs to the UPF0176 family
BN117_0293	COG0588	phosphoglycerate mutase activity
BN117_0294	COG4942	peptidase
BN117_0295	COG0793	Belongs to the peptidase S41A family
BN117_0296	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BN117_0300	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BN117_0305	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BN117_0306	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BN117_0307	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BN117_0308	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BN117_0310	COG0142	geranyltranstransferase activity
BN117_0311	COG0583	DNA-binding transcription factor activity
BN117_0314	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_0317	COG2994	toxin metabolic process
BN117_0318	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
BN117_0319	COG2274	protein secretion by the type I secretion system
BN117_0320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BN117_0321	COG1538	Outer membrane efflux protein
BN117_0324	COG0765	amino acid transport
BN117_0325	COG0765	amino acid transport
BN117_0326	COG1126	abc transporter atp-binding protein
BN117_0330	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_0332	COG1802	Transcriptional regulator
BN117_0335	COG1802	Transcriptional regulator
BN117_0337	COG0318	PFAM AMP-dependent synthetase and ligase
BN117_0339	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_0343	COG0028	Belongs to the TPP enzyme family
BN117_0345	COG0583	DNA-binding transcription factor activity
BN117_0346	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_0347	COG2301	Belongs to the HpcH HpaI aldolase family
BN117_0348	COG2188	Transcriptional regulator
BN117_0351	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0357	COG0583	DNA-binding transcription factor activity
BN117_0358	COG1024	Enoyl-CoA hydratase
BN117_0365	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_0368	COG1902	pentaerythritol trinitrate reductase activity
BN117_0373	COG0745	RESPONSE REGULATOR receiver
BN117_0379	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BN117_0380	COG2890	protein-(glutamine-N5) methyltransferase activity
BN117_0381	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BN117_0383	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0390	COG1464	Belongs to the NlpA lipoprotein family
BN117_0397	COG4211	Belongs to the binding-protein-dependent transport system permease family
BN117_0398	COG0583	DNA-binding transcription factor activity
BN117_0399	COG0683	leucine binding
BN117_0400	COG0154	amidase activity
BN117_0401	COG0288	reversible hydration of carbon dioxide
BN117_0405	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BN117_0408	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BN117_0410	COG1414	Transcriptional regulator
BN117_0411	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_0412	COG2031	fatty acid transporter
BN117_0415	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BN117_0416	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BN117_0418	COG4257	antibiotic catabolic process
BN117_0419	COG2808	Putative FMN-binding domain
BN117_0420	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BN117_0421	COG0747	negative chemotaxis
BN117_0422	COG0657	acetylesterase activity
BN117_0424	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BN117_0425	COG2207	Transcriptional regulator
BN117_0427	COG4569	acetaldehyde dehydrogenase (acetylating) activity
BN117_0428	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
BN117_0430	COG1538	Outer membrane efflux protein
BN117_0433	COG0583	DNA-binding transcription factor activity
BN117_0434	COG0628	permease
BN117_0436	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BN117_0437	COG0251	oxidation-reduction process
BN117_0439	COG0330	HflC and HflK could
BN117_0440	COG3422	double-strand break repair
BN117_0447	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0449	COG1414	Transcriptional regulator
BN117_0450	COG1024	Enoyl-CoA hydratase
BN117_0451	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BN117_0453	COG0604	alcohol dehydrogenase
BN117_0454	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_0457	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_0460	COG0251	oxidation-reduction process
BN117_0462	COG2031	fatty acid transporter
BN117_0465	COG1278	Cold shock
BN117_0466	COG0583	DNA-binding transcription factor activity
BN117_0468	COG3119	arylsulfatase activity
BN117_0471	COG1228	amidohydrolase
BN117_0472	COG0523	cobalamin synthesis protein
BN117_0473	COG1819	glycosyl
BN117_0492	COG0326	Molecular chaperone. Has ATPase activity
BN117_0493	COG0625	glutathione transferase activity
BN117_0496	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BN117_0497	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BN117_0498	COG1652	LysM domain
BN117_0503	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_0504	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BN117_0506	COG0582	viral genome integration into host DNA
BN117_0529	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BN117_0536	COG0420	3'-5' exonuclease activity
BN117_0537	COG0419	ATPase involved in DNA repair
BN117_0564	COG0583	DNA-binding transcription factor activity
BN117_0566	COG0583	DNA-binding transcription factor activity
BN117_0570	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BN117_0571	COG1960	acyl-CoA dehydrogenase activity
BN117_0574	COG0183	Belongs to the thiolase family
BN117_0575	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BN117_0577	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_0578	COG0583	DNA-binding transcription factor activity
BN117_0579	COG1960	acyl-CoA dehydrogenase activity
BN117_0582	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
BN117_0587	COG1309	transcriptional regulator
BN117_0589	COG1024	Enoyl-CoA hydratase
BN117_0593	COG1024	Enoyl-CoA hydratase
BN117_0594	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_0595	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0596	COG1454	alcohol dehydrogenase
BN117_0597	COG1024	Enoyl-CoA hydratase
BN117_0601	COG1012	belongs to the aldehyde dehydrogenase family
BN117_0602	COG0431	NADPH-dependent FMN reductase
BN117_0603	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_0604	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BN117_0607	COG1414	Transcriptional regulator
BN117_0608	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BN117_0609	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_0610	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0614	COG1960	acyl-CoA dehydrogenase activity
BN117_0615	COG0318	PFAM AMP-dependent synthetase and ligase
BN117_0619	COG1024	Enoyl-CoA hydratase
BN117_0621	COG1960	acyl-CoA dehydrogenase activity
BN117_0622	COG1024	Enoyl-CoA hydratase
BN117_0623	COG0183	Belongs to the thiolase family
BN117_0624	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0627	COG0583	DNA-binding transcription factor activity
BN117_0628	COG2267	carboxylic ester hydrolase activity
BN117_0631	COG0625	glutathione transferase activity
BN117_0632	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0634	COG2186	Transcriptional regulator
BN117_0635	COG1012	belongs to the aldehyde dehydrogenase family
BN117_0644	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BN117_0645	COG0436	Aminotransferase
BN117_0646	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_0647	COG0765	amino acid transport
BN117_0649	COG1473	amidohydrolase
BN117_0650	COG1414	Transcriptional regulator
BN117_0652	COG0154	amidase activity
BN117_0664	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BN117_0667	COG3135	benzoate transporter
BN117_0670	COG0583	DNA-binding transcription factor activity
BN117_0672	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BN117_0673	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_0674	COG1335	isochorismatase
BN117_0677	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BN117_0684	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0685	COG0633	Ferredoxin
BN117_0685	COG0543	2 iron, 2 sulfur cluster binding
BN117_0686	COG4638	Rieske (2fe-2S)
BN117_0687	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_0690	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BN117_0694	COG1012	belongs to the aldehyde dehydrogenase family
BN117_0695	COG3384	dioxygenase
BN117_0697	COG3971	2-oxopent-4-enoate hydratase activity
BN117_0700	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0701	COG0028	Belongs to the TPP enzyme family
BN117_0708	COG1024	Enoyl-CoA hydratase
BN117_0709	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_0710	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_0713	COG1960	acyl-CoA dehydrogenase activity
BN117_0722	COG0183	Belongs to the thiolase family
BN117_0723	COG2030	dehydratase
BN117_0725	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0733	COG1459	type II secretion system
BN117_0734	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BN117_0735	COG3267	Type II secretory pathway component ExeA
BN117_0735	COG3409	Peptidoglycan-binding domain 1 protein
BN117_0737	COG1450	Type ii and iii secretion system protein
BN117_0765	COG0387	Pfam Sodium calcium exchanger
BN117_0767	COG3468	outer membrane autotransporter barrel domain protein
BN117_0768	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BN117_0769	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BN117_0778	COG4772	TonB-dependent receptor
BN117_0780	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BN117_0785	COG1054	Belongs to the UPF0176 family
BN117_0786	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BN117_0786	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BN117_0788	COG0489	protein tyrosine kinase activity
BN117_0797	COG2081	HI0933 family
BN117_0798	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BN117_0800	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BN117_0801	COG0509	glycine decarboxylation via glycine cleavage system
BN117_0802	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BN117_0802	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BN117_0806	COG1024	Enoyl-CoA hydratase
BN117_0810	COG4172	Belongs to the ABC transporter superfamily
BN117_0811	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_0812	COG0601	transmembrane transport
BN117_0813	COG0747	negative chemotaxis
BN117_0815	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BN117_0816	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BN117_0821	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BN117_0822	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BN117_0825	COG0438	transferase activity, transferring glycosyl groups
BN117_0828	COG0438	transferase activity, transferring glycosyl groups
BN117_0829	COG0438	transferase activity, transferring glycosyl groups
BN117_0830	COG0166	Belongs to the GPI family
BN117_0833	COG0277	FAD linked oxidase domain protein
BN117_0834	COG0745	RESPONSE REGULATOR receiver
BN117_0835	COG0642	Histidine kinase
BN117_0836	COG1368	sulfuric ester hydrolase activity
BN117_0843	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BN117_0846	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BN117_0851	COG0012	GTP binding
BN117_0855	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BN117_0856	COG0732	type I restriction modification DNA specificity domain
BN117_0862	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_0863	COG1309	transcriptional regulator
BN117_0865	COG2814	Major facilitator Superfamily
BN117_0870	COG0281	malic enzyme
BN117_0870	COG0280	phosphate acetyltransferase
BN117_0872	COG0601	transmembrane transport
BN117_0873	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_0874	COG4172	Belongs to the ABC transporter superfamily
BN117_0875	COG0747	negative chemotaxis
BN117_0877	COG0583	DNA-binding transcription factor activity
BN117_0881	COG0640	Transcriptional regulator
BN117_0884	COG3135	benzoate transporter
BN117_0885	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BN117_0886	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BN117_0887	COG0742	ribosomal rna small subunit methyltransferase
BN117_0890	COG3639	organic phosphonate transmembrane transporter activity
BN117_0891	COG3639	organic phosphonate transmembrane transporter activity
BN117_0892	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BN117_0897	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BN117_0898	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BN117_0900	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BN117_0901	COG1058	Belongs to the CinA family
BN117_0901	COG1546	Belongs to the CinA family
BN117_0902	COG0284	orotidine-5'-phosphate decarboxylase activity
BN117_0903	COG1252	NADH dehydrogenase
BN117_0906	COG3468	outer membrane autotransporter barrel domain protein
BN117_0913	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BN117_0914	COG0129	dihydroxy-acid dehydratase activity
BN117_0915	COG4654	Cytochrome c, class I
BN117_0916	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BN117_0921	COG1473	amidohydrolase
BN117_0922	COG0418	dihydroorotase activity
BN117_0923	COG0488	(ABC) transporter
BN117_0924	COG2001	Belongs to the MraZ family
BN117_0925	COG0275	rRNA processing
BN117_0926	COG3116	cell division
BN117_0928	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BN117_0929	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BN117_0930	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BN117_0932	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BN117_0933	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BN117_0934	COG1181	Belongs to the D-alanine--D-alanine ligase family
BN117_0935	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BN117_0937	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BN117_0938	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
BN117_0940	COG0739	heme binding
BN117_0941	COG0653	protein targeting
BN117_0945	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_0946	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_0947	COG1522	sequence-specific DNA binding
BN117_0950	COG2239	Acts as a magnesium transporter
BN117_0952	COG2855	membrane
BN117_0954	COG1473	amidohydrolase
BN117_0955	COG0318	PFAM AMP-dependent synthetase and ligase
BN117_0957	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_0957	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BN117_0958	COG1501	Belongs to the glycosyl hydrolase 31 family
BN117_0959	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BN117_0960	COG2011	ABC-type metal ion transport system permease component
BN117_0962	COG1454	alcohol dehydrogenase
BN117_0966	COG2186	Transcriptional regulator
BN117_0970	COG1175	transmembrane transport
BN117_0971	COG0395	ABC-type sugar transport system, permease component
BN117_0972	COG3842	ATPase activity
BN117_0973	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BN117_0974	COG1653	transport
BN117_0977	COG2818	Glycosylase
BN117_0978	COG2982	Protein involved in outer membrane biogenesis
BN117_0979	COG1309	transcriptional regulator
BN117_0980	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_0988	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BN117_0989	COG2353	YceI-like domain
BN117_0990	COG4774	siderophore transport
BN117_0994	COG0019	diaminopimelate decarboxylase activity
BN117_0997	COG0747	negative chemotaxis
BN117_0998	COG0601	transmembrane transport
BN117_0999	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_1001	COG0154	amidase activity
BN117_1002	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BN117_1006	COG2154	pterin-4-alpha-carbinolamine dehydratase
BN117_1008	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BN117_1011	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BN117_1012	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BN117_1013	COG1929	Belongs to the glycerate kinase type-1 family
BN117_1014	COG0469	pyruvate kinase activity
BN117_1015	COG0700	Nucleoside recognition
BN117_1017	COG0242	peptide deformylase activity
BN117_1020	COG0204	Acyl-transferase
BN117_1021	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BN117_1022	COG0751	glycine-tRNA ligase activity
BN117_1023	COG0752	glycyl-tRNA synthetase alpha subunit
BN117_1026	COG0066	3-isopropylmalate dehydratase activity
BN117_1027	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BN117_1028	COG2188	Transcriptional regulator
BN117_1030	COG1024	Enoyl-CoA hydratase
BN117_1032	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
BN117_1034	COG2301	Belongs to the HpcH HpaI aldolase family
BN117_1035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BN117_1037	COG0617	tRNA 3'-terminal CCA addition
BN117_1040	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BN117_1041	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BN117_1042	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BN117_1043	COG0586	Pfam SNARE associated Golgi protein
BN117_1044	COG0860	N-Acetylmuramoyl-L-alanine amidase
BN117_1045	COG0802	atpase or kinase
BN117_1048	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_1050	COG0405	Gamma-glutamyltransferase
BN117_1051	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_1053	COG1960	acyl-CoA dehydrogenase activity
BN117_1054	COG0583	DNA-binding transcription factor activity
BN117_1057	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BN117_1058	COG0259	pyridoxamine-phosphate oxidase activity
BN117_1060	COG2814	Major facilitator Superfamily
BN117_1061	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BN117_1062	COG2188	Transcriptional regulator
BN117_1063	COG0318	PFAM AMP-dependent synthetase and ligase
BN117_1066	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BN117_1068	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BN117_1071	COG1215	transferase activity, transferring glycosyl groups
BN117_1073	COG0601	transmembrane transport
BN117_1074	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_1075	COG0444	Belongs to the ABC transporter superfamily
BN117_1076	COG4608	Belongs to the ABC transporter superfamily
BN117_1081	COG0488	(ABC) transporter
BN117_1084	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BN117_1085	COG2894	cell division
BN117_1086	COG0850	regulation of cytokinetic process
BN117_1087	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BN117_1093	COG0514	ATP-dependent DNA helicase (RecQ)
BN117_1094	COG2255	four-way junction helicase activity
BN117_1097	COG0632	four-way junction helicase activity
BN117_1098	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BN117_1102	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BN117_1104	COG0006	proline dipeptidase activity
BN117_1107	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BN117_1110	COG4783	chaperone-mediated protein folding
BN117_1111	COG0429	hydrolase of the alpha beta-hydrolase fold
BN117_1117	COG0513	Belongs to the DEAD box helicase family
BN117_1120	COG1058	Belongs to the CinA family
BN117_1120	COG1546	Belongs to the CinA family
BN117_1121	COG1414	Transcriptional regulator
BN117_1125	COG0167	dihydroorotate dehydrogenase activity
BN117_1126	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BN117_1127	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
BN117_1129	COG0583	DNA-binding transcription factor activity
BN117_1136	COG0405	Gamma-glutamyltransferase
BN117_1138	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_1140	COG0730	response to heat
BN117_1141	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BN117_1144	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BN117_1144	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BN117_1146	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BN117_1151	COG1024	Enoyl-CoA hydratase
BN117_1153	COG2030	dehydratase
BN117_1154	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_1156	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BN117_1158	COG0583	DNA-binding transcription factor activity
BN117_1160	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_1161	COG4311	Sarcosine oxidase, delta subunit
BN117_1162	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BN117_1162	COG0446	pyridine nucleotide-disulphide oxidoreductase
BN117_1168	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BN117_1170	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BN117_1171	COG0735	belongs to the Fur family
BN117_1173	COG0497	DNA recombination
BN117_1175	COG1420	regulation of RNA biosynthetic process
BN117_1176	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BN117_1178	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BN117_1180	COG0443	Heat shock 70 kDa protein
BN117_1181	COG0484	heat shock protein binding
BN117_1182	COG0612	Peptidase, M16
BN117_1186	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BN117_1193	COG0745	RESPONSE REGULATOR receiver
BN117_1194	COG2205	protein histidine kinase activity
BN117_1195	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
BN117_1197	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BN117_1199	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BN117_1201	COG1193	negative regulation of DNA recombination
BN117_1202	COG0492	ferredoxin-NADP+ reductase activity
BN117_1203	COG1674	ftsk spoiiie
BN117_1204	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BN117_1205	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BN117_1210	COG0406	alpha-ribazole phosphatase activity
BN117_1212	COG3842	ATPase activity
BN117_1215	COG2233	PERMEase
BN117_1216	COG0840	transmembrane signaling receptor activity
BN117_1217	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BN117_1218	COG1534	Rna-binding protein
BN117_1220	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BN117_1224	COG0248	Ppx GppA phosphatase
BN117_1243	COG0559	Belongs to the binding-protein-dependent transport system permease family
BN117_1249	COG0559	Belongs to the binding-protein-dependent transport system permease family
BN117_1256	COG2072	flavoprotein involved in K transport
BN117_1257	COG1250	3-hydroxyacyl-CoA dehydrogenase
BN117_1263	COG1137	ATPase activity
BN117_1265	COG0154	amidase activity
BN117_1269	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_1270	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_1271	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BN117_1272	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BN117_1273	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BN117_1277	COG1522	sequence-specific DNA binding
BN117_1278	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BN117_1279	COG1473	amidohydrolase
BN117_1280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_1281	COG4597	amino acid ABC transporter
BN117_1282	COG0765	amino acid transport
BN117_1283	COG1126	abc transporter atp-binding protein
BN117_1286	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BN117_1292	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_1294	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BN117_1295	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BN117_1298	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_1299	COG3546	catalase activity
BN117_1300	COG2985	domain, Protein
BN117_1301	COG0583	DNA-binding transcription factor activity
BN117_1308	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BN117_1316	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BN117_1318	COG1132	(ABC) transporter
BN117_1323	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
BN117_1325	COG1012	belongs to the aldehyde dehydrogenase family
BN117_1326	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BN117_1328	COG0511	ligase activity, forming carbon-carbon bonds
BN117_1333	COG2188	Transcriptional regulator
BN117_1334	COG0439	Biotin carboxylase
BN117_1336	COG0511	ligase activity, forming carbon-carbon bonds
BN117_1345	COG3971	2-oxopent-4-enoate hydratase activity
BN117_1346	COG0583	DNA-binding transcription factor activity
BN117_1349	COG0179	Fumarylacetoacetate (FAA) hydrolase
BN117_1359	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_1367	COG0251	oxidation-reduction process
BN117_1368	COG1902	pentaerythritol trinitrate reductase activity
BN117_1374	COG4789	Type iii secretion
BN117_1394	COG4790	Type iii secretion
BN117_1395	COG4794	Type iii secretion
BN117_1396	COG4791	protein targeting
BN117_1397	COG4792	protein secretion
BN117_1400	COG1595	DNA-templated transcription, initiation
BN117_1404	COG2770	Histidine kinase
BN117_1404	COG2208	phosphoserine phosphatase activity
BN117_1406	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BN117_1407	COG2172	sigma factor antagonist activity
BN117_1408	COG1366	Belongs to the anti-sigma-factor antagonist family
BN117_1409	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BN117_1413	COG2321	neutral zinc metallopeptidase
BN117_1414	COG0009	L-threonylcarbamoyladenylate synthase
BN117_1415	COG1994	Peptidase M50
BN117_1416	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BN117_1417	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BN117_1418	COG3539	Fimbrial protein
BN117_1419	COG2850	peptidyl-arginine hydroxylation
BN117_1421	COG3360	Dodecin
BN117_1428	COG0668	transmembrane transport
BN117_1429	COG1414	Transcriptional regulator
BN117_1432	COG0483	inositol monophosphate 1-phosphatase activity
BN117_1433	COG1253	flavin adenine dinucleotide binding
BN117_1438	COG0215	cysteine-tRNA ligase activity
BN117_1440	COG0825	malonyl-CoA metabolic process
BN117_1441	COG0037	tRNA processing
BN117_1442	COG0527	aspartate kinase activity
BN117_1445	COG1250	3-hydroxyacyl-CoA dehydrogenase
BN117_1446	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BN117_1446	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BN117_1449	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BN117_1450	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
BN117_1451	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_1453	COG0583	DNA-binding transcription factor activity
BN117_1458	COG3842	ATPase activity
BN117_1459	COG0446	pyridine nucleotide-disulphide oxidoreductase
BN117_1459	COG1902	pentaerythritol trinitrate reductase activity
BN117_1460	COG1414	Transcriptional regulator
BN117_1463	COG0251	oxidation-reduction process
BN117_1468	COG1902	pentaerythritol trinitrate reductase activity
BN117_1470	COG1215	transferase activity, transferring glycosyl groups
BN117_1471	COG1649	PFAM Uncharacterised BCR, COG1649
BN117_1471	COG0726	polysaccharide deacetylase
BN117_1474	COG1846	Transcriptional regulator
BN117_1480	COG2080	2 iron, 2 sulfur cluster binding
BN117_1481	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BN117_1482	COG3473	Maleate cis-trans isomerase
BN117_1483	COG0596	Alpha beta hydrolase
BN117_1484	COG2309	aminopeptidase activity
BN117_1485	COG1335	isochorismatase
BN117_1486	COG2010	Cytochrome c
BN117_1486	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BN117_1490	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_1492	COG0318	PFAM AMP-dependent synthetase and ligase
BN117_1494	COG0183	Belongs to the thiolase family
BN117_1495	COG1250	3-hydroxyacyl-CoA dehydrogenase
BN117_1495	COG1024	Enoyl-CoA hydratase
BN117_1498	COG0183	Belongs to the thiolase family
BN117_1501	COG2197	response regulator
BN117_1505	COG1045	serine acetyltransferase
BN117_1507	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BN117_1510	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BN117_1513	COG0210	DNA helicase
BN117_1516	COG0747	negative chemotaxis
BN117_1517	COG0601	transmembrane transport
BN117_1518	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_1519	COG4172	Belongs to the ABC transporter superfamily
BN117_1520	COG1846	Transcriptional regulator
BN117_1529	COG4964	Belongs to the GSP D family
BN117_1542	COG3474	cytochrome
BN117_1543	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BN117_1546	COG3384	dioxygenase
BN117_1547	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BN117_1551	COG2885	chlorophyll binding
BN117_1558	COG0697	spore germination
BN117_1562	COG1511	domain protein
BN117_1562	COG3264	Mechanosensitive ion channel
BN117_1563	COG0583	DNA-binding transcription factor activity
BN117_1564	COG0427	acetyl-CoA hydrolase
BN117_1565	COG0385	Bile acid
BN117_1567	COG3012	SEC-C Motif Domain Protein
BN117_1570	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BN117_1573	COG0495	leucyl-tRNA aminoacylation
BN117_1574	COG2814	Major facilitator Superfamily
BN117_1578	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BN117_1579	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BN117_1580	COG2814	Major facilitator Superfamily
BN117_1581	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BN117_1583	COG4176	ABC-type proline glycine betaine transport system permease component
BN117_1585	COG1942	4-Oxalocrotonate Tautomerase
BN117_1586	COG0183	Belongs to the thiolase family
BN117_1588	COG1802	Transcriptional regulator
BN117_1590	COG1024	Enoyl-CoA hydratase
BN117_1591	COG0318	PFAM AMP-dependent synthetase and ligase
BN117_1593	COG2032	superoxide dismutase activity
BN117_1601	COG0582	viral genome integration into host DNA
BN117_1607	COG3723	Recombinational DNA repair protein, rece pathway
BN117_1639	COG1196	nuclear chromosome segregation
BN117_1639	COG0741	lytic transglycosylase activity
BN117_1639	COG0739	heme binding
BN117_1647	COG2135	peptidase activity
BN117_1648	COG2814	Major facilitator Superfamily
BN117_1650	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BN117_1655	COG0287	Prephenate dehydrogenase
BN117_1656	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BN117_1657	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BN117_1661	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BN117_1662	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
BN117_1664	COG1596	polysaccharide export
BN117_1664	COG1555	photosystem II stabilization
BN117_1666	COG2951	lytic endotransglycosylase activity
BN117_1667	COG0123	including yeast histone deacetylase and acetoin utilization protein
BN117_1670	COG1960	acyl-CoA dehydrogenase activity
BN117_1671	COG0450	alkyl hydroperoxide reductase
BN117_1674	COG4208	sulfate ABC transporter
BN117_1676	COG0175	sulfate reduction
BN117_1682	COG0335	large ribosomal subunit rRNA binding
BN117_1684	COG0667	Aldo Keto reductase
BN117_1685	COG1162	GTPase activity
BN117_1686	COG0501	Belongs to the peptidase M48B family
BN117_1687	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BN117_1689	COG3327	negative regulation of DNA-templated transcription, initiation
BN117_1691	COG3460	Phenylacetate-CoA oxygenase
BN117_1692	COG3396	Phenylacetate-CoA oxygenase
BN117_1693	COG2151	metal-sulfur cluster biosynthetic enzyme
BN117_1694	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BN117_1695	COG1012	belongs to the aldehyde dehydrogenase family
BN117_1696	COG1024	Enoyl-CoA hydratase
BN117_1697	COG2050	protein possibly involved in aromatic compounds catabolism
BN117_1699	COG3539	Fimbrial protein
BN117_1700	COG3539	Fimbrial protein
BN117_1701	COG3539	Fimbrial protein
BN117_1703	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BN117_1703	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BN117_1705	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BN117_1706	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BN117_1709	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BN117_1710	COG3842	ATPase activity
BN117_1711	COG1176	ABC-type spermidine putrescine transport system, permease component I
BN117_1712	COG1177	transmembrane transport
BN117_1717	COG1960	acyl-CoA dehydrogenase activity
BN117_1719	COG0704	Plays a role in the regulation of phosphate uptake
BN117_1721	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BN117_1722	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BN117_1722	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BN117_1723	COG1643	Atp-dependent helicase
BN117_1726	COG0438	transferase activity, transferring glycosyl groups
BN117_1727	COG0726	polysaccharide deacetylase
BN117_1728	COG0463	Glycosyl transferase, family 2
BN117_1729	COG0438	transferase activity, transferring glycosyl groups
BN117_1730	COG2194	sulfuric ester hydrolase activity
BN117_1735	COG0859	PFAM glycosyl transferase family 9
BN117_1736	COG1132	(ABC) transporter
BN117_1739	COG0077	Prephenate dehydratase
BN117_1740	COG1530	ribonuclease E activity
BN117_1743	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BN117_1744	COG0799	negative regulation of ribosome biogenesis
BN117_1745	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BN117_1747	COG0151	Belongs to the GarS family
BN117_1749	COG0433	COG0433 Predicted ATPase
BN117_1750	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BN117_1752	COG1012	belongs to the aldehyde dehydrogenase family
BN117_1757	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BN117_1759	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_1761	COG0747	negative chemotaxis
BN117_1763	COG0473	3-isopropylmalate dehydrogenase activity
BN117_1764	COG2814	Major facilitator Superfamily
BN117_1765	COG1566	PFAM secretion protein HlyD family protein
BN117_1767	COG1846	Transcriptional regulator
BN117_1769	COG0697	spore germination
BN117_1772	COG0501	Belongs to the peptidase M48B family
BN117_1776	COG0583	DNA-binding transcription factor activity
BN117_1777	COG3842	ATPase activity
BN117_1778	COG1178	ABC-type Fe3 transport system permease component
BN117_1779	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BN117_1785	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_1787	COG1722	exodeoxyribonuclease VII activity
BN117_1788	COG0142	geranyltranstransferase activity
BN117_1790	COG1469	GTP cyclohydrolase I activity
BN117_1791	COG0360	Binds together with S18 to 16S ribosomal RNA
BN117_1792	COG2965	DNA replication, synthesis of RNA primer
BN117_1793	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BN117_1797	COG0305	Participates in initiation and elongation during chromosome replication
BN117_1799	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BN117_1800	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BN117_1801	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BN117_1802	COG3737	Protein of unknown function (DUF498/DUF598)
BN117_1803	COG0436	Aminotransferase
BN117_1808	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
BN117_1809	COG0308	aminopeptidase N
BN117_1813	COG0312	modulator of DNA gyrase
BN117_1814	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BN117_1815	COG3064	Membrane
BN117_1815	COG3210	domain, Protein
BN117_1815	COG3064	Membrane
BN117_1815	COG3210	domain, Protein
BN117_1815	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BN117_1815	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BN117_1816	COG0277	FAD linked oxidase domain protein
BN117_1817	COG0277	FAD linked oxidase domain protein
BN117_1818	COG0277	FAD linked oxidase domain protein
BN117_1819	COG0247	lactate metabolic process
BN117_1820	COG2819	hydrolase of the alpha beta superfamily
BN117_1827	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_1828	COG0583	DNA-binding transcription factor activity
BN117_1829	COG0482	sulfurtransferase activity
BN117_1830	COG0730	response to heat
BN117_1831	COG0625	glutathione transferase activity
BN117_1832	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BN117_1833	COG3909	cytochrome
BN117_1840	COG3706	GGDEF domain
BN117_1847	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
BN117_1849	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BN117_1850	COG0069	glutamate synthase activity
BN117_1851	COG2391	methyltransferase activity
BN117_1852	COG0679	Auxin Efflux Carrier
BN117_1855	COG0557	exoribonuclease II activity
BN117_1856	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BN117_1858	COG3128	pkhd-type hydroxylase
BN117_1859	COG0776	regulation of translation
BN117_1864	COG0642	Histidine kinase
BN117_1865	COG3158	transport of potassium into the cell
BN117_1867	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BN117_1868	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BN117_1870	COG0583	DNA-binding transcription factor activity
BN117_1872	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BN117_1876	COG2186	Transcriptional regulator
BN117_1877	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BN117_1881	COG0268	Binds directly to 16S ribosomal RNA
BN117_1883	COG0728	peptidoglycan biosynthetic process
BN117_1885	COG0563	adenylate kinase activity
BN117_1887	COG2835	tetraacyldisaccharide 4'-kinase activity
BN117_1890	COG0811	peptide transport
BN117_1892	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BN117_1893	COG0038	chloride channel
BN117_1894	COG0183	Belongs to the thiolase family
BN117_1896	COG1278	Cold shock
BN117_1899	COG4953	penicillin-binding protein 1C
BN117_1900	COG0542	response to heat
BN117_1901	COG2995	paraquat-inducible protein a
BN117_1902	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BN117_1902	COG3008	intermembrane lipid transfer
BN117_1904	COG0506	proline dehydrogenase activity
BN117_1904	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BN117_1904	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BN117_1910	COG2271	Major facilitator Superfamily
BN117_1913	COG0004	ammonium transporteR
BN117_1917	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BN117_1918	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BN117_1919	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BN117_1920	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BN117_1920	COG0072	phenylalanine-tRNA ligase activity
BN117_1924	COG0500	methyltransferase
BN117_1929	COG1522	sequence-specific DNA binding
BN117_1938	COG0540	Belongs to the ATCase OTCase family
BN117_1939	COG2974	May be involved in recombination
BN117_1941	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_1942	COG0583	DNA-binding transcription factor activity
BN117_1943	COG0183	Belongs to the thiolase family
BN117_1946	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_1949	COG3842	ATPase activity
BN117_1950	COG1250	3-hydroxyacyl-CoA dehydrogenase
BN117_1950	COG1024	Enoyl-CoA hydratase
BN117_1955	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BN117_1956	COG2137	regulation of response to DNA damage stimulus
BN117_1960	COG0045	succinate-CoA ligase (ADP-forming) activity
BN117_1961	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BN117_1962	COG0861	Integral membrane protein TerC family
BN117_1963	COG0861	Integral membrane protein TerC family
BN117_1977	COG4964	Belongs to the GSP D family
BN117_1983	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BN117_1985	COG1295	ribonuclease BN
BN117_1988	COG0745	RESPONSE REGULATOR receiver
BN117_1989	COG2205	protein histidine kinase activity
BN117_1990	COG3300	MHYT domain
BN117_1990	COG5001	Diguanylate cyclase
BN117_1991	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BN117_1993	COG1763	Mo-molybdopterin cofactor biosynthetic process
BN117_1994	COG0303	'Molybdopterin
BN117_1995	COG0746	molybdenum cofactor guanylyltransferase activity
BN117_1996	COG0489	protein tyrosine kinase activity
BN117_2002	COG0437	4 iron, 4 sulfur cluster binding
BN117_2008	COG1122	ATPase activity
BN117_2013	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BN117_2016	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BN117_2019	COG0135	phosphoribosylanthranilate isomerase activity
BN117_2029	COG2197	response regulator
BN117_2030	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BN117_2031	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BN117_2034	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BN117_2035	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BN117_2037	COG1764	response to oxidative stress
BN117_2038	COG2423	ornithine cyclodeaminase activity
BN117_2040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_2041	COG0765	amino acid transport
BN117_2042	COG0765	amino acid transport
BN117_2043	COG1126	abc transporter atp-binding protein
BN117_2046	COG0586	Pfam SNARE associated Golgi protein
BN117_2048	COG1522	sequence-specific DNA binding
BN117_2050	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BN117_2051	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BN117_2052	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BN117_2053	COG0196	riboflavin kinase activity
BN117_2054	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BN117_2055	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BN117_2055	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BN117_2058	COG0210	DNA helicase
BN117_2059	COG4771	TonB-dependent receptor
BN117_2060	COG0488	(ABC) transporter
BN117_2061	COG2890	protein-(glutamine-N5) methyltransferase activity
BN117_2062	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BN117_2063	COG2171	N-acyltransferase activity
BN117_2064	COG0436	Aminotransferase
BN117_2065	COG0582	viral genome integration into host DNA
BN117_2072	COG3723	Recombinational DNA repair protein, rece pathway
BN117_2108	COG1196	nuclear chromosome segregation
BN117_2121	COG2135	peptidase activity
BN117_2126	COG1278	Cold shock
BN117_2128	COG1278	Cold shock
BN117_2130	COG0544	peptidyl-prolyl cis-trans isomerase activity
BN117_2131	COG0740	serine-type endopeptidase activity
BN117_2133	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BN117_2135	COG0583	DNA-binding transcription factor activity
BN117_2136	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_2139	COG1024	Enoyl-CoA hydratase
BN117_2141	COG0183	Belongs to the thiolase family
BN117_2142	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_2143	COG1960	acyl-CoA dehydrogenase activity
BN117_2146	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BN117_2148	COG3468	outer membrane autotransporter barrel domain protein
BN117_2149	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BN117_2151	COG0556	nucleotide-excision repair
BN117_2152	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BN117_2154	COG1104	cysteine desulfurase activity
BN117_2155	COG0822	iron-sulfur transferase activity
BN117_2156	COG0316	Belongs to the HesB IscA family
BN117_2157	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BN117_2158	COG0443	Heat shock 70 kDa protein
BN117_2159	COG0633	Ferredoxin
BN117_2162	COG1024	Enoyl-CoA hydratase
BN117_2168	COG1022	Amp-dependent synthetase and ligase
BN117_2171	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BN117_2172	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_2174	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BN117_2177	COG1136	(ABC) transporter
BN117_2178	COG0084	hydrolase, TatD family'
BN117_2182	COG2333	competence protein COMEC
BN117_2182	COG0658	competence protein
BN117_2184	COG0613	PHP domain protein
BN117_2186	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BN117_2187	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BN117_2187	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BN117_2188	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BN117_2189	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BN117_2189	COG0047	phosphoribosylformylglycinamidine synthase activity
BN117_2190	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BN117_2190	COG3210	domain, Protein
BN117_2190	COG3064	Membrane
BN117_2194	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2198	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BN117_2201	COG2197	response regulator
BN117_2205	COG0519	Catalyzes the synthesis of GMP from XMP
BN117_2205	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BN117_2206	COG0582	viral genome integration into host DNA
BN117_2223	COG1002	Type II restriction enzyme, methylase subunits
BN117_2224	COG1061	Type III restriction enzyme res subunit
BN117_2225	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BN117_2226	COG1196	nuclear chromosome segregation
BN117_2231	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BN117_2246	COG2814	Major facilitator Superfamily
BN117_2255	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BN117_2258	COG3618	amidohydrolase
BN117_2260	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2261	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_2265	COG2079	MmgE PrpD family protein
BN117_2266	COG1012	belongs to the aldehyde dehydrogenase family
BN117_2273	COG1280	lysine exporter protein (LysE YggA)
BN117_2276	COG0747	negative chemotaxis
BN117_2277	COG0601	transmembrane transport
BN117_2278	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_2280	COG1609	Transcriptional regulator
BN117_2282	COG0789	Transcriptional regulator
BN117_2287	COG2188	Transcriptional regulator
BN117_2288	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2292	COG1802	Transcriptional regulator
BN117_2295	COG0842	Transport permease protein
BN117_2296	COG0842	Transport permease protein
BN117_2297	COG1131	(ABC) transporter
BN117_2301	COG0656	L-ascorbic acid biosynthetic process
BN117_2302	COG3284	Transcriptional regulator
BN117_2303	COG1012	belongs to the aldehyde dehydrogenase family
BN117_2306	COG2733	membrane
BN117_2307	COG0583	DNA-binding transcription factor activity
BN117_2309	COG5507	3-demethylubiquinone-9 3-methyltransferase
BN117_2310	COG2169	Transcriptional regulator
BN117_2316	COG0659	secondary active sulfate transmembrane transporter activity
BN117_2321	COG1132	(ABC) transporter
BN117_2329	COG2207	Transcriptional regulator
BN117_2336	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BN117_2337	COG1280	lysine exporter protein (LysE YggA)
BN117_2341	COG0625	glutathione transferase activity
BN117_2348	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
BN117_2351	COG3246	L-lysine catabolic process to acetate
BN117_2352	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_2357	COG2346	COG2346, Truncated hemoglobins
BN117_2359	COG1126	abc transporter atp-binding protein
BN117_2360	COG0765	amino acid transport
BN117_2361	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_2363	COG0789	Transcriptional regulator
BN117_2365	COG0165	Argininosuccinate lyase
BN117_2375	COG0747	negative chemotaxis
BN117_2376	COG0601	transmembrane transport
BN117_2377	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_2378	COG4172	Belongs to the ABC transporter superfamily
BN117_2381	COG2814	Major facilitator Superfamily
BN117_2382	COG3161	chorismate lyase activity
BN117_2383	COG1187	pseudouridine synthase activity
BN117_2385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BN117_2389	COG1999	signal sequence binding
BN117_2390	COG0339	signal peptide processing
BN117_2391	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BN117_2392	COG4566	intracellular signal transduction
BN117_2394	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BN117_2395	COG0508	dehydrogenase complex catalyzes the overall conversion of
BN117_2396	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BN117_2397	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BN117_2403	COG0745	RESPONSE REGULATOR receiver
BN117_2404	COG0643	Histidine kinase
BN117_2404	COG2198	Histidine kinase
BN117_2406	COG0840	transmembrane signaling receptor activity
BN117_2407	COG0840	transmembrane signaling receptor activity
BN117_2411	COG1338	Plays a role in the flagellum-specific transport system
BN117_2413	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BN117_2415	COG1580	Controls the rotational direction of flagella during chemotaxis
BN117_2418	COG1157	protein secretion by the type III secretion system
BN117_2420	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BN117_2422	COG1677	Flagellar hook-basal body complex protein FliE
BN117_2430	COG0285	dihydrofolate synthase activity
BN117_2436	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BN117_2437	COG0024	Methionine aminopeptidase
BN117_2438	COG0052	Belongs to the universal ribosomal protein uS2 family
BN117_2439	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BN117_2440	COG0528	UMP kinase activity
BN117_2441	COG0233	cytoplasmic translational termination
BN117_2442	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BN117_2444	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BN117_2445	COG0750	zinc metalloprotease
BN117_2446	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BN117_2447	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BN117_2448	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BN117_2449	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BN117_2452	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BN117_2453	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BN117_2456	COG0519	Catalyzes the synthesis of GMP from XMP
BN117_2456	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BN117_2458	COG0330	HflC and HflK could
BN117_2459	COG3706	GGDEF domain
BN117_2460	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BN117_2461	COG2867	negative regulation of translational initiation
BN117_2463	COG1960	acyl-CoA dehydrogenase activity
BN117_2464	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BN117_2469	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BN117_2470	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BN117_2471	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BN117_2472	COG0084	hydrolase, TatD family'
BN117_2475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_2476	COG0765	amino acid transport
BN117_2477	COG1126	abc transporter atp-binding protein
BN117_2478	COG0010	Belongs to the arginase family
BN117_2479	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BN117_2481	COG3189	MarR family transcriptional regulator
BN117_2488	COG0861	Integral membrane protein TerC family
BN117_2493	COG2988	succinylglutamate desuccinylase activity
BN117_2497	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2498	COG2084	Dehydrogenase
BN117_2500	COG3842	ATPase activity
BN117_2501	COG1414	Transcriptional regulator
BN117_2502	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_2507	COG2188	Transcriptional regulator
BN117_2511	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2512	COG0583	DNA-binding transcription factor activity
BN117_2516	COG1172	Belongs to the binding-protein-dependent transport system permease family
BN117_2517	COG1129	ABC transporter
BN117_2524	COG0861	Integral membrane protein TerC family
BN117_2525	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_2528	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BN117_2535	COG2197	response regulator
BN117_2537	COG2944	sequence-specific DNA binding
BN117_2538	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
BN117_2539	COG0625	glutathione transferase activity
BN117_2544	COG1414	Transcriptional regulator
BN117_2545	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_2546	COG0183	Belongs to the thiolase family
BN117_2550	COG0183	Belongs to the thiolase family
BN117_2551	COG1454	alcohol dehydrogenase
BN117_2552	COG0824	Thioesterase
BN117_2556	COG0583	DNA-binding transcription factor activity
BN117_2557	COG0431	NADPH-dependent FMN reductase
BN117_2563	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_2564	COG0583	DNA-binding transcription factor activity
BN117_2566	COG3706	GGDEF domain
BN117_2566	COG4251	negative regulation of phosphorylation
BN117_2566	COG2203	Gaf domain
BN117_2566	COG5001	Diguanylate cyclase
BN117_2567	COG1454	alcohol dehydrogenase
BN117_2567	COG1012	belongs to the aldehyde dehydrogenase family
BN117_2569	COG0330	HflC and HflK could
BN117_2571	COG1126	abc transporter atp-binding protein
BN117_2572	COG0765	amino acid transport
BN117_2573	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_2577	COG3043	anaerobic respiration
BN117_2578	COG3005	denitrification pathway
BN117_2579	COG4133	protoheme IX ABC transporter activity
BN117_2583	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BN117_2589	COG4948	Mandelate Racemase Muconate Lactonizing
BN117_2590	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2591	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BN117_2592	COG0066	3-isopropylmalate dehydratase activity
BN117_2595	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_2597	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2599	COG1802	Transcriptional regulator
BN117_2602	COG0583	DNA-binding transcription factor activity
BN117_2603	COG2204	response regulator
BN117_2605	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BN117_2610	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BN117_2611	COG0667	Aldo Keto reductase
BN117_2614	COG2259	Doxx family
BN117_2618	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_2621	COG0386	Belongs to the glutathione peroxidase family
BN117_2622	COG0625	glutathione transferase activity
BN117_2625	COG0095	Lipoate-protein ligase
BN117_2628	COG0688	phosphatidylethanolamine metabolic process
BN117_2630	COG1464	Belongs to the NlpA lipoprotein family
BN117_2633	COG2363	Small membrane protein
BN117_2634	COG0697	spore germination
BN117_2636	COG2133	pyrroloquinoline quinone binding
BN117_2637	COG0625	glutathione transferase activity
BN117_2638	COG1794	racemase activity, acting on amino acids and derivatives
BN117_2642	COG0559	Belongs to the binding-protein-dependent transport system permease family
BN117_2644	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BN117_2646	COG1653	transport
BN117_2647	COG1175	transmembrane transport
BN117_2649	COG3842	ATPase activity
BN117_2653	COG0156	8-amino-7-oxononanoate synthase activity
BN117_2659	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BN117_2662	COG0438	transferase activity, transferring glycosyl groups
BN117_2666	COG0463	Glycosyl transferase, family 2
BN117_2670	COG0783	Belongs to the Dps family
BN117_2673	COG0583	DNA-binding transcription factor activity
BN117_2674	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BN117_2677	COG0656	L-ascorbic acid biosynthetic process
BN117_2678	COG2814	Major facilitator Superfamily
BN117_2679	COG0583	DNA-binding transcription factor activity
BN117_2681	COG1840	ABC-type Fe3 transport system, periplasmic component
BN117_2682	COG1178	ABC-type Fe3 transport system permease component
BN117_2683	COG3842	ATPase activity
BN117_2684	COG1741	Belongs to the pirin family
BN117_2685	COG1741	Belongs to the pirin family
BN117_2687	COG2204	response regulator
BN117_2689	COG0174	glutamine synthetase
BN117_2690	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BN117_2691	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BN117_2692	COG5002	protein histidine kinase activity
BN117_2692	COG5001	Diguanylate cyclase
BN117_2693	COG0840	transmembrane signaling receptor activity
BN117_2696	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BN117_2697	COG1561	YicC-like family, N-terminal region
BN117_2700	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BN117_2701	COG0791	NLP P60 protein
BN117_2702	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_2703	COG2863	cytochrome
BN117_2704	COG3258	Cytochrome c
BN117_2705	COG0194	GDP metabolic process
BN117_2706	COG1758	RNA polymerase activity
BN117_2707	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BN117_2708	COG1126	abc transporter atp-binding protein
BN117_2709	COG0765	amino acid transport
BN117_2710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_2714	COG0583	DNA-binding transcription factor activity
BN117_2719	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BN117_2722	COG2831	hemolysin activation secretion protein
BN117_2723	COG3539	Fimbrial protein
BN117_2724	COG3188	usher protein
BN117_2725	COG3121	Chaperone
BN117_2727	COG3064	Membrane
BN117_2727	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
BN117_2727	COG3210	domain, Protein
BN117_2728	COG2197	response regulator
BN117_2734	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BN117_2740	COG4181	ATPase activity
BN117_2742	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BN117_2743	COG0584	glycerophosphoryl diester phosphodiesterase
BN117_2744	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BN117_2746	COG0678	peroxiredoxin activity
BN117_2746	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BN117_2748	COG0789	Transcriptional regulator
BN117_2749	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BN117_2756	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BN117_2757	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BN117_2758	COG2252	PERMEase
BN117_2759	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BN117_2760	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BN117_2766	COG0488	(ABC) transporter
BN117_2770	COG1024	Enoyl-CoA hydratase
BN117_2771	COG1619	proteins homologs of microcin C7 resistance protein MccF
BN117_2772	COG0590	tRNA wobble adenosine to inosine editing
BN117_2776	COG2212	antiporter activity
BN117_2777	COG1863	multisubunit Na H antiporter MnhE subunit
BN117_2778	COG0651	ATP synthesis coupled electron transport
BN117_2779	COG1006	Multisubunit Na H antiporter MnhC subunit
BN117_2780	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BN117_2780	COG2111	Na H antiporter
BN117_2781	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2783	COG0420	3'-5' exonuclease activity
BN117_2784	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_2790	COG0395	ABC-type sugar transport system, permease component
BN117_2792	COG3842	ATPase activity
BN117_2793	COG3842	ATPase activity
BN117_2798	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_2805	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BN117_2810	COG0602	queuosine metabolic process
BN117_2811	COG0720	synthase
BN117_2812	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BN117_2813	COG0235	Class ii aldolase
BN117_2818	COG1566	PFAM secretion protein HlyD family protein
BN117_2820	COG0400	carboxylic ester hydrolase activity
BN117_2823	COG0587	DNA-directed DNA polymerase activity
BN117_2824	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_2825	COG1959	2 iron, 2 sulfur cluster binding
BN117_2833	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BN117_2836	COG0667	Aldo Keto reductase
BN117_2850	COG0840	transmembrane signaling receptor activity
BN117_2851	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BN117_2852	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BN117_2855	COG0833	amino acid
BN117_2861	COG3829	transcription factor binding
BN117_2867	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_2868	COG1012	belongs to the aldehyde dehydrogenase family
BN117_2869	COG0028	Belongs to the TPP enzyme family
BN117_2872	COG0583	DNA-binding transcription factor activity
BN117_2873	COG4692	amylo-alpha-1,6-glucosidase activity
BN117_2875	COG0183	Belongs to the thiolase family
BN117_2878	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_2879	COG0633	Ferredoxin
BN117_2883	COG4638	Rieske (2fe-2S)
BN117_2895	COG4680	protein conserved in bacteria
BN117_2913	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BN117_2915	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BN117_2916	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
BN117_2917	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BN117_2919	COG0330	HflC and HflK could
BN117_2920	COG0330	HflC and HflK could
BN117_2921	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BN117_2922	COG1923	regulation of RNA biosynthetic process
BN117_2923	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BN117_2924	COG1160	GTP binding
BN117_2925	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BN117_2926	COG2976	Protein conserved in bacteria
BN117_2930	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BN117_2931	COG0105	UTP biosynthetic process
BN117_2932	COG0525	valine-tRNA ligase activity
BN117_2940	COG0228	four-way junction DNA binding
BN117_2942	COG0425	Belongs to the sulfur carrier protein TusA family
BN117_2943	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BN117_2954	COG4172	Belongs to the ABC transporter superfamily
BN117_2955	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_2956	COG0601	transmembrane transport
BN117_2957	COG0747	negative chemotaxis
BN117_2962	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_2967	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BN117_2968	COG3395	kinase activity
BN117_2970	COG5285	phytanoyl-CoA dioxygenase
BN117_2973	COG0456	acetyltransferase
BN117_2976	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BN117_2977	COG2358	TRAP transporter, solute receptor (TAXI family
BN117_2979	COG2311	Membrane
BN117_2984	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BN117_2986	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BN117_2987	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BN117_2988	COG1760	l-serine dehydratase
BN117_2989	COG1283	sodium-dependent phosphate transmembrane transporter activity
BN117_2990	COG0412	Dienelactone hydrolase
BN117_2993	COG1611	Belongs to the LOG family
BN117_2997	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BN117_2998	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BN117_3000	COG2251	uridine kinase activity
BN117_3000	COG0195	Participates in both transcription termination and antitermination
BN117_3001	COG0779	Required for maturation of 30S ribosomal subunits
BN117_3002	COG1187	pseudouridine synthase activity
BN117_3003	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BN117_3006	COG0523	cobalamin synthesis protein
BN117_3008	COG0625	glutathione transferase activity
BN117_3010	COG1047	Peptidyl-prolyl cis-trans
BN117_3011	COG2003	Belongs to the UPF0758 family
BN117_3012	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BN117_3013	COG3483	tryptophan 2,3-dioxygenase activity
BN117_3016	COG0534	Mate efflux family protein
BN117_3020	COG2304	oxidoreductase activity
BN117_3023	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_3024	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BN117_3025	COG1562	ergosterol biosynthetic process
BN117_3026	COG1562	ergosterol biosynthetic process
BN117_3027	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
BN117_3027	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
BN117_3028	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BN117_3030	COG1131	(ABC) transporter
BN117_3034	COG1477	protein flavinylation
BN117_3037	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BN117_3040	COG5564	TIM-barrel signal transduction protein
BN117_3041	COG5441	Belongs to the UPF0261 family
BN117_3043	COG3468	outer membrane autotransporter barrel domain protein
BN117_3044	COG3468	outer membrane autotransporter barrel domain protein
BN117_3045	COG0542	response to heat
BN117_3046	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BN117_3049	COG0494	nUDIX hydrolase
BN117_3050	COG3530	Putative quorum-sensing-regulated virulence factor
BN117_3052	COG1595	DNA-templated transcription, initiation
BN117_3053	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BN117_3057	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BN117_3059	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_3060	COG0765	amino acid transport
BN117_3061	COG0765	amino acid transport
BN117_3066	COG2841	Protein conserved in bacteria
BN117_3067	COG2814	Major facilitator Superfamily
BN117_3070	COG0628	permease
BN117_3071	COG0842	Transport permease protein
BN117_3072	COG1131	(ABC) transporter
BN117_3077	COG0348	domain, Protein
BN117_3085	COG0156	8-amino-7-oxononanoate synthase activity
BN117_3087	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BN117_3087	COG4106	trans-aconitate 2-methyltransferase activity
BN117_3088	COG1380	Effector of murein hydrolase LrgA
BN117_3089	COG1346	cytolysis
BN117_3091	COG2224	Isocitrate lyase
BN117_3092	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BN117_3092	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BN117_3094	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BN117_3097	COG0736	holo-[acyl-carrier-protein] synthase activity
BN117_3098	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BN117_3100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BN117_3101	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BN117_3107	COG0583	DNA-binding transcription factor activity
BN117_3115	COG0583	DNA-binding transcription factor activity
BN117_3118	COG0179	Fumarylacetoacetate (FAA) hydrolase
BN117_3123	COG1053	succinate dehydrogenase
BN117_3125	COG2079	MmgE PrpD family protein
BN117_3127	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_3130	COG0583	DNA-binding transcription factor activity
BN117_3132	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
BN117_3132	COG0028	Belongs to the TPP enzyme family
BN117_3133	COG0436	Aminotransferase
BN117_3137	COG0778	Nitroreductase
BN117_3139	COG3706	GGDEF domain
BN117_3140	COG0589	response to stress
BN117_3142	COG2951	lytic endotransglycosylase activity
BN117_3143	COG2833	Protein of unknown function (DUF455)
BN117_3146	COG1132	(ABC) transporter
BN117_3147	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BN117_3147	COG0189	ligase activity
BN117_3148	COG1181	Belongs to the D-alanine--D-alanine ligase family
BN117_3148	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BN117_3149	COG3237	CsbD-like
BN117_3151	COG2823	Periplasmic or secreted lipoprotein
BN117_3155	COG0672	)-iron permease
BN117_3158	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
BN117_3159	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_3160	COG3243	poly(R)-hydroxyalkanoic acid synthase
BN117_3162	COG0564	pseudouridine synthase activity
BN117_3164	COG1199	ATP-dependent helicase activity
BN117_3165	COG2183	response to ionizing radiation
BN117_3170	COG4774	siderophore transport
BN117_3171	COG3712	iron ion homeostasis
BN117_3172	COG1595	DNA-templated transcription, initiation
BN117_3173	COG2175	clavaminate synthase activity
BN117_3174	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_3175	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3176	COG0583	DNA-binding transcription factor activity
BN117_3177	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_3178	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BN117_3179	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BN117_3180	COG0508	dehydrogenase complex catalyzes the overall conversion of
BN117_3181	COG0567	Dehydrogenase, E1 component
BN117_3182	COG1297	OPT oligopeptide transporter protein
BN117_3185	COG0280	phosphate acetyltransferase
BN117_3185	COG0281	malic enzyme
BN117_3186	COG3539	Fimbrial protein
BN117_3189	COG0372	Belongs to the citrate synthase family
BN117_3190	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BN117_3191	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BN117_3192	COG1053	succinate dehydrogenase
BN117_3193	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BN117_3194	COG2009	succinate dehydrogenase
BN117_3195	COG2188	Transcriptional regulator
BN117_3196	COG0039	L-malate dehydrogenase activity
BN117_3200	COG2828	Protein conserved in bacteria
BN117_3202	COG1981	membrane
BN117_3207	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BN117_3209	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BN117_3215	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BN117_3216	COG0148	phosphopyruvate hydratase activity
BN117_3218	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BN117_3219	COG0504	CTP synthase activity
BN117_3223	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_3225	COG0747	negative chemotaxis
BN117_3226	COG4172	Belongs to the ABC transporter superfamily
BN117_3227	COG1446	asparaginase
BN117_3233	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BN117_3236	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BN117_3237	COG0697	spore germination
BN117_3238	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BN117_3240	COG3193	protein, possibly involved in utilization of glycolate and propanediol
BN117_3241	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BN117_3242	COG0791	NLP P60 protein
BN117_3244	COG0583	DNA-binding transcription factor activity
BN117_3247	COG0583	DNA-binding transcription factor activity
BN117_3252	COG0670	Belongs to the BI1 family
BN117_3253	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3255	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BN117_3257	COG1381	Involved in DNA repair and RecF pathway recombination
BN117_3258	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BN117_3259	COG0571	ribonuclease III activity
BN117_3260	COG0681	Belongs to the peptidase S26 family
BN117_3262	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BN117_3267	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BN117_3268	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BN117_3271	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BN117_3273	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BN117_3274	COG1399	metal-binding, possibly nucleic acid-binding protein
BN117_3277	COG3023	N-Acetylmuramoyl-L-alanine amidase
BN117_3279	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BN117_3280	COG0546	phosphoglycolate phosphatase activity
BN117_3282	COG1530	ribonuclease E activity
BN117_3284	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BN117_3285	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BN117_3286	COG0159	tryptophan synthase activity
BN117_3289	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BN117_3290	COG3228	Belongs to the MtfA family
BN117_3292	COG0251	oxidation-reduction process
BN117_3293	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BN117_3294	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BN117_3297	COG2878	Part of a membrane complex involved in electron transport
BN117_3298	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BN117_3305	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BN117_3310	COG1268	BioY protein
BN117_3311	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BN117_3312	COG1122	ATPase activity
BN117_3313	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BN117_3315	COG0271	Belongs to the BolA IbaG family
BN117_3316	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BN117_3317	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BN117_3319	COG1196	nuclear chromosome segregation
BN117_3320	COG0477	Major facilitator Superfamily
BN117_3321	COG1573	uracil-dna glycosylase
BN117_3322	COG1214	PFAM Peptidase M22, glycoprotease
BN117_3325	COG0450	alkyl hydroperoxide reductase
BN117_3326	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BN117_3328	COG2223	nitrite transmembrane transporter activity
BN117_3329	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BN117_3330	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BN117_3331	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BN117_3332	COG0560	Phosphoserine phosphatase
BN117_3333	COG0583	DNA-binding transcription factor activity
BN117_3334	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3335	COG0028	Belongs to the TPP enzyme family
BN117_3341	COG1007	ATP synthesis coupled electron transport
BN117_3344	COG0713	ATP synthesis coupled electron transport
BN117_3346	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BN117_3347	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BN117_3348	COG1034	ATP synthesis coupled electron transport
BN117_3350	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BN117_3352	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BN117_3353	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BN117_3354	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BN117_3355	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BN117_3359	COG0671	phosphoesterase, PA-phosphatase related
BN117_3361	COG1597	lipid kinase activity
BN117_3362	COG0583	DNA-binding transcription factor activity
BN117_3363	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BN117_3364	COG1733	regulation of RNA biosynthetic process
BN117_3369	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
BN117_3373	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_3377	COG3608	succinylglutamate desuccinylase aspartoacylase
BN117_3378	COG0626	cystathionine gamma-synthase activity
BN117_3379	COG0583	DNA-binding transcription factor activity
BN117_3381	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3382	COG0165	Argininosuccinate lyase
BN117_3385	COG3799	methylaspartate ammonia-lyase activity
BN117_3387	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BN117_3388	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BN117_3389	COG0149	triose-phosphate isomerase activity
BN117_3392	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BN117_3394	COG1185	polyribonucleotide nucleotidyltransferase activity
BN117_3395	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BN117_3397	COG1183	phosphatidylcholine synthase activity
BN117_3399	COG0440	acetolactate synthase activity
BN117_3400	COG0028	Belongs to the TPP enzyme family
BN117_3403	COG3022	response to hydroperoxide
BN117_3404	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_3407	COG3486	L-lysine 6-monooxygenase (NADPH) activity
BN117_3413	COG2814	Major facilitator Superfamily
BN117_3416	COG3706	GGDEF domain
BN117_3421	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BN117_3422	COG0505	Belongs to the CarA family
BN117_3424	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_3426	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BN117_3427	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_3430	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BN117_3431	COG1074	ATP-dependent DNA helicase activity
BN117_3433	COG2814	Major facilitator Superfamily
BN117_3435	COG1686	Belongs to the peptidase S11 family
BN117_3439	COG4974	Belongs to the 'phage' integrase family
BN117_3441	COG0028	Belongs to the TPP enzyme family
BN117_3445	COG1126	abc transporter atp-binding protein
BN117_3446	COG0765	amino acid transport
BN117_3449	COG1414	Transcriptional regulator
BN117_3450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_3451	COG0009	L-threonylcarbamoyladenylate synthase
BN117_3452	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BN117_3453	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BN117_3454	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BN117_3458	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BN117_3468	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BN117_3470	COG0739	heme binding
BN117_3472	COG0521	Mo-molybdopterin cofactor biosynthetic process
BN117_3473	COG0306	phosphate transporter
BN117_3475	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BN117_3481	COG0625	glutathione transferase activity
BN117_3484	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BN117_3485	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BN117_3487	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BN117_3488	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BN117_3489	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BN117_3490	COG2732	(Barnase) inhibitor
BN117_3492	COG0280	phosphate acetyltransferase
BN117_3492	COG0281	malic enzyme
BN117_3494	COG0436	Aminotransferase
BN117_3495	COG0741	lytic transglycosylase activity
BN117_3496	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BN117_3502	COG3468	outer membrane autotransporter barrel domain protein
BN117_3504	COG2027	D-alanyl-D-alanine carboxypeptidase
BN117_3506	COG0343	queuine tRNA-ribosyltransferase activity
BN117_3507	COG1862	Preprotein translocase
BN117_3508	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BN117_3509	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BN117_3511	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BN117_3512	COG1702	phosphate starvation-inducible protein PhoH
BN117_3514	COG4535	Mg2 and Co2 transporter CorC
BN117_3515	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BN117_3516	COG0667	Aldo Keto reductase
BN117_3517	COG1802	Transcriptional regulator
BN117_3522	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3524	COG1335	isochorismatase
BN117_3525	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BN117_3532	COG0697	spore germination
BN117_3534	COG0678	peroxiredoxin activity
BN117_3536	COG0412	Dienelactone hydrolase
BN117_3539	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BN117_3541	COG0521	Mo-molybdopterin cofactor biosynthetic process
BN117_3542	COG0303	'Molybdopterin
BN117_3543	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BN117_3547	COG3383	formate dehydrogenase (NAD+) activity
BN117_3548	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BN117_3550	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BN117_3557	COG0477	Major facilitator Superfamily
BN117_3558	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BN117_3559	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BN117_3560	COG1845	cytochrome c oxidase, subunit III
BN117_3561	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BN117_3563	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_3568	COG1666	GTP binding
BN117_3571	COG4942	peptidase
BN117_3581	COG0640	Transcriptional regulator
BN117_3582	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BN117_3583	COG1845	cytochrome c oxidase, subunit III
BN117_3584	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BN117_3586	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
BN117_3591	COG0583	DNA-binding transcription factor activity
BN117_3593	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_3594	COG0583	DNA-binding transcription factor activity
BN117_3600	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BN117_3601	COG1671	Belongs to the UPF0178 family
BN117_3602	COG2900	Belongs to the SlyX family
BN117_3606	COG2207	Transcriptional regulator
BN117_3606	COG1917	Cupin 2, conserved barrel domain protein
BN117_3609	COG2070	2-Nitropropane dioxygenase
BN117_3611	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BN117_3612	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BN117_3620	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BN117_3621	COG0596	Alpha beta hydrolase
BN117_3627	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BN117_3629	COG1294	oxidase, subunit
BN117_3630	COG1271	oxidase subunit
BN117_3634	COG2169	Transcriptional regulator
BN117_3634	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BN117_3640	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BN117_3642	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BN117_3642	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BN117_3643	COG0154	amidase activity
BN117_3650	COG1024	Enoyl-CoA hydratase
BN117_3652	COG1012	belongs to the aldehyde dehydrogenase family
BN117_3657	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BN117_3660	COG0840	transmembrane signaling receptor activity
BN117_3672	COG0583	DNA-binding transcription factor activity
BN117_3674	COG1309	transcriptional regulator
BN117_3675	COG2076	Multidrug Resistance protein
BN117_3676	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_3677	COG1960	acyl-CoA dehydrogenase activity
BN117_3678	COG1309	transcriptional regulator
BN117_3680	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_3682	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BN117_3685	COG1538	Outer membrane efflux protein
BN117_3687	COG2274	protein secretion by the type I secretion system
BN117_3688	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BN117_3693	COG1335	isochorismatase
BN117_3694	COG1448	Aminotransferase
BN117_3695	COG1418	mRNA catabolic process
BN117_3699	COG1063	alcohol dehydrogenase
BN117_3701	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BN117_3703	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_3705	COG0318	PFAM AMP-dependent synthetase and ligase
BN117_3707	COG1522	sequence-specific DNA binding
BN117_3709	COG0307	riboflavin synthase, alpha
BN117_3710	COG2807	transmembrane transport
BN117_3711	COG0590	tRNA wobble adenosine to inosine editing
BN117_3714	COG1902	pentaerythritol trinitrate reductase activity
BN117_3718	COG0559	Belongs to the binding-protein-dependent transport system permease family
BN117_3719	COG0251	oxidation-reduction process
BN117_3720	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BN117_3723	COG1414	Transcriptional regulator
BN117_3724	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_3729	COG1024	Enoyl-CoA hydratase
BN117_3730	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_3733	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BN117_3735	COG0583	DNA-binding transcription factor activity
BN117_3738	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BN117_3740	COG3386	PFAM SMP-30 Gluconolaconase
BN117_3741	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3744	COG1177	transmembrane transport
BN117_3745	COG3842	ATPase activity
BN117_3750	COG1024	Enoyl-CoA hydratase
BN117_3751	COG0583	DNA-binding transcription factor activity
BN117_3757	COG2084	Dehydrogenase
BN117_3759	COG1024	Enoyl-CoA hydratase
BN117_3763	COG3119	arylsulfatase activity
BN117_3764	COG0583	DNA-binding transcription factor activity
BN117_3768	COG0583	DNA-binding transcription factor activity
BN117_3770	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_3772	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BN117_3773	COG0066	3-isopropylmalate dehydratase activity
BN117_3774	COG0473	3-isopropylmalate dehydrogenase activity
BN117_3776	COG2423	ornithine cyclodeaminase activity
BN117_3781	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_3783	COG4172	Belongs to the ABC transporter superfamily
BN117_3786	COG0318	PFAM AMP-dependent synthetase and ligase
BN117_3787	COG1024	Enoyl-CoA hydratase
BN117_3787	COG1250	3-hydroxyacyl-CoA dehydrogenase
BN117_3793	COG3842	ATPase activity
BN117_3798	COG2199	diguanylate cyclase activity
BN117_3799	COG0583	DNA-binding transcription factor activity
BN117_3800	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3805	COG0583	DNA-binding transcription factor activity
BN117_3806	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3807	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_3808	COG1960	acyl-CoA dehydrogenase activity
BN117_3811	COG0405	Gamma-glutamyltransferase
BN117_3814	COG1335	isochorismatase
BN117_3817	COG1414	Transcriptional regulator
BN117_3818	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3819	COG1053	succinate dehydrogenase
BN117_3820	COG0583	DNA-binding transcription factor activity
BN117_3822	COG1053	succinate dehydrogenase
BN117_3826	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BN117_3829	COG0697	spore germination
BN117_3831	COG2084	Dehydrogenase
BN117_3832	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BN117_3838	COG0494	nUDIX hydrolase
BN117_3839	COG0442	prolyl-tRNA aminoacylation
BN117_3840	COG0824	Thioesterase
BN117_3841	COG0811	peptide transport
BN117_3842	COG0848	biopolymer transport protein
BN117_3844	COG0823	Involved in the tonB-independent uptake of proteins
BN117_3847	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BN117_3848	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BN117_3852	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BN117_3859	COG1960	acyl-CoA dehydrogenase activity
BN117_3860	COG0583	DNA-binding transcription factor activity
BN117_3861	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3862	COG1024	Enoyl-CoA hydratase
BN117_3863	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_3864	COG1253	flavin adenine dinucleotide binding
BN117_3865	COG1285	pathogenesis
BN117_3866	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BN117_3870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BN117_3871	COG0697	spore germination
BN117_3876	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BN117_3877	COG0463	Glycosyl transferase, family 2
BN117_3879	COG0786	glutamate:sodium symporter activity
BN117_3881	COG2031	fatty acid transporter
BN117_3883	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BN117_3884	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BN117_3885	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BN117_3886	COG0328	RNA-DNA hybrid ribonuclease activity
BN117_3887	COG2226	methyltransferase
BN117_3888	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BN117_3889	COG0741	lytic transglycosylase activity
BN117_3889	COG1388	LysM domain
BN117_3892	COG2979	Protein of unknown function (DUF533)
BN117_3907	COG2816	NAD+ diphosphatase activity
BN117_3908	COG1309	transcriptional regulator
BN117_3909	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_3912	COG1024	Enoyl-CoA hydratase
BN117_3915	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_3918	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_3921	COG3119	arylsulfatase activity
BN117_3926	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BN117_3927	COG0830	nickel cation binding
BN117_3929	COG0804	urea catabolic process
BN117_3930	COG0832	Belongs to the urease beta subunit family
BN117_3932	COG0831	urea catabolic process
BN117_3933	COG0829	nickel cation binding
BN117_3937	COG2188	Transcriptional regulator
BN117_3942	COG2719	SpoVR family
BN117_3943	COG2718	Belongs to the UPF0229 family
BN117_3944	COG2766	serine protein kinase
BN117_3945	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BN117_3945	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BN117_3948	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BN117_3949	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BN117_3951	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BN117_3954	COG0316	Belongs to the HesB IscA family
BN117_3957	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BN117_3958	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BN117_3959	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BN117_3960	COG0312	modulator of DNA gyrase
BN117_3964	COG1116	anion transmembrane transporter activity
BN117_3965	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_3966	COG1335	isochorismatase
BN117_3967	COG0346	lactoylglutathione lyase activity
BN117_3968	COG0513	Belongs to the DEAD box helicase family
BN117_3970	COG1802	Transcriptional regulator
BN117_3971	COG0045	succinate-CoA ligase (ADP-forming) activity
BN117_3971	COG1042	CoA-binding domain protein
BN117_3971	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BN117_3972	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BN117_3981	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BN117_3982	COG1696	Membrane protein involved in D-alanine export
BN117_3987	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BN117_3989	COG2264	protein methyltransferase activity
BN117_3990	COG0439	Biotin carboxylase
BN117_3991	COG0511	ligase activity, forming carbon-carbon bonds
BN117_3992	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BN117_3993	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BN117_3994	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BN117_3995	COG3150	esterase
BN117_3996	COG0557	exoribonuclease II activity
BN117_3998	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BN117_3999	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BN117_4004	COG0540	Belongs to the ATCase OTCase family
BN117_4006	COG1678	Uncharacterized ACR, COG1678
BN117_4008	COG0351	phosphomethylpyrimidine kinase
BN117_4009	COG0352	thiamine-phosphate diphosphorylase activity
BN117_4010	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BN117_4015	COG1960	acyl-CoA dehydrogenase activity
BN117_4016	COG1024	Enoyl-CoA hydratase
BN117_4017	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_4029	COG0494	nUDIX hydrolase
BN117_4034	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
BN117_4036	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BN117_4039	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BN117_4040	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BN117_4042	COG0477	Major facilitator Superfamily
BN117_4046	COG1126	abc transporter atp-binding protein
BN117_4047	COG0765	amino acid transport
BN117_4048	COG4597	amino acid ABC transporter
BN117_4049	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_4050	COG2884	Cell division ATP-binding protein ftsE
BN117_4051	COG2177	Part of the ABC transporter FtsEX involved in
BN117_4052	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
BN117_4054	COG1194	a g-specific adenine glycosylase
BN117_4056	COG2226	methyltransferase
BN117_4058	COG4206	TonB-dependent receptor
BN117_4059	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BN117_4060	COG2022	thiamine diphosphate biosynthetic process
BN117_4061	COG0351	phosphomethylpyrimidine kinase
BN117_4062	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BN117_4064	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BN117_4066	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BN117_4069	COG2226	methyltransferase
BN117_4070	COG0745	RESPONSE REGULATOR receiver
BN117_4071	COG5002	protein histidine kinase activity
BN117_4075	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BN117_4076	COG0583	DNA-binding transcription factor activity
BN117_4078	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BN117_4079	COG1984	allophanate hydrolase subunit 2
BN117_4082	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_4084	COG1024	Enoyl-CoA hydratase
BN117_4085	COG0657	acetylesterase activity
BN117_4087	COG1802	Transcriptional regulator
BN117_4089	COG1238	metal cluster binding
BN117_4090	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BN117_4091	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BN117_4095	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BN117_4096	COG4988	ABC transporter
BN117_4098	COG1294	oxidase, subunit
BN117_4101	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BN117_4103	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BN117_4106	COG1137	ATPase activity
BN117_4107	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BN117_4112	COG1660	Displays ATPase and GTPase activities
BN117_4114	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BN117_4116	COG0792	nuclease activity
BN117_4117	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BN117_4118	COG2823	Periplasmic or secreted lipoprotein
BN117_4121	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BN117_4124	COG0471	metal ion transport
BN117_4125	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BN117_4126	COG0772	Belongs to the SEDS family
BN117_4127	COG0768	penicillin binding
BN117_4129	COG1792	Involved in formation and maintenance of cell shape
BN117_4130	COG1077	Cell shape determining protein MreB Mrl
BN117_4131	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BN117_4133	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BN117_4134	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BN117_4135	COG0708	Exodeoxyribonuclease III
BN117_4136	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BN117_4137	COG2860	membrane
BN117_4139	COG0583	DNA-binding transcription factor activity
BN117_4140	COG0473	3-isopropylmalate dehydrogenase activity
BN117_4141	COG3391	amine dehydrogenase activity
BN117_4146	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BN117_4147	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BN117_4148	COG0765	amino acid transport
BN117_4149	COG0765	amino acid transport
BN117_4150	COG1126	abc transporter atp-binding protein
BN117_4151	COG1794	racemase activity, acting on amino acids and derivatives
BN117_4152	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BN117_4153	COG2223	nitrite transmembrane transporter activity
BN117_4154	COG2813	Specifically methylates the guanine in position
BN117_4154	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BN117_4155	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BN117_4156	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BN117_4161	COG2918	glutathione biosynthetic process
BN117_4165	COG0583	DNA-binding transcription factor activity
BN117_4166	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BN117_4167	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BN117_4174	COG0154	amidase activity
BN117_4176	COG1414	Transcriptional regulator
BN117_4178	COG1250	3-hydroxyacyl-CoA dehydrogenase
BN117_4178	COG1024	Enoyl-CoA hydratase
BN117_4180	COG2132	Multicopper oxidase
BN117_4183	COG1250	3-hydroxyacyl-CoA dehydrogenase
BN117_4188	COG1024	Enoyl-CoA hydratase
BN117_4189	COG1024	Enoyl-CoA hydratase
BN117_4190	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BN117_4192	COG0747	negative chemotaxis
BN117_4194	COG0601	transmembrane transport
BN117_4195	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_4196	COG0444	Belongs to the ABC transporter superfamily
BN117_4197	COG4608	Belongs to the ABC transporter superfamily
BN117_4200	COG0210	DNA helicase
BN117_4201	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BN117_4202	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BN117_4204	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BN117_4206	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BN117_4208	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BN117_4211	COG0356	it plays a direct role in the translocation of protons across the membrane
BN117_4214	COG1024	Enoyl-CoA hydratase
BN117_4218	COG0037	tRNA processing
BN117_4219	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BN117_4221	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BN117_4222	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BN117_4223	COG2967	ApaG domain
BN117_4224	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BN117_4225	COG0546	phosphoglycolate phosphatase activity
BN117_4227	COG0512	Glutamine amidotransferase of anthranilate synthase
BN117_4230	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_4234	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BN117_4236	COG1607	acyl-coa hydrolase
BN117_4245	COG3069	C4-dicarboxylate transmembrane transporter activity
BN117_4247	COG1802	Transcriptional regulator
BN117_4253	COG1595	DNA-templated transcription, initiation
BN117_4254	COG3712	iron ion homeostasis
BN117_4256	COG3720	iron ion transport
BN117_4257	COG4558	Periplasmic binding protein
BN117_4258	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BN117_4259	COG1120	ATPase activity
BN117_4260	COG1683	Conserved Protein
BN117_4266	COG3064	Membrane
BN117_4269	COG1234	tRNA 3'-trailer cleavage
BN117_4271	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BN117_4272	COG1802	Transcriptional regulator
BN117_4274	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BN117_4278	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_4282	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_4285	COG2186	Transcriptional regulator
BN117_4286	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_4287	COG4948	Mandelate Racemase Muconate Lactonizing
BN117_4291	COG1053	succinate dehydrogenase
BN117_4292	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_4295	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BN117_4297	COG0411	ABC transporter
BN117_4303	COG0508	dehydrogenase complex catalyzes the overall conversion of
BN117_4304	COG1024	Enoyl-CoA hydratase
BN117_4305	COG0022	dehydrogenase e1 component
BN117_4306	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BN117_4310	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_4311	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_4312	COG0183	Belongs to the thiolase family
BN117_4313	COG2030	dehydratase
BN117_4314	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_4322	COG3842	ATPase activity
BN117_4324	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BN117_4327	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
BN117_4328	COG0583	DNA-binding transcription factor activity
BN117_4331	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_4333	COG0277	FAD linked oxidase domain protein
BN117_4334	COG1960	acyl-CoA dehydrogenase activity
BN117_4335	COG1960	acyl-CoA dehydrogenase activity
BN117_4337	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BN117_4340	COG2072	flavoprotein involved in K transport
BN117_4341	COG0604	alcohol dehydrogenase
BN117_4344	COG1024	Enoyl-CoA hydratase
BN117_4346	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_4349	COG1522	sequence-specific DNA binding
BN117_4350	COG0183	Belongs to the thiolase family
BN117_4352	COG1960	acyl-CoA dehydrogenase activity
BN117_4362	COG2814	Major facilitator Superfamily
BN117_4367	COG1999	signal sequence binding
BN117_4376	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BN117_4380	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BN117_4383	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
BN117_4384	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
BN117_4386	COG0069	glutamate synthase activity
BN117_4386	COG0067	glutamate synthase
BN117_4386	COG0070	glutamate synthase
BN117_4388	COG3047	cAMP biosynthetic process
BN117_4390	COG1127	ABC transporter
BN117_4391	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BN117_4392	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BN117_4393	COG2853	Lipoprotein
BN117_4395	COG1131	(ABC) transporter
BN117_4396	COG0842	Transport permease protein
BN117_4398	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BN117_4401	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BN117_4402	COG0131	Imidazoleglycerol-phosphate dehydratase
BN117_4404	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BN117_4405	COG0107	imidazoleglycerol-phosphate synthase activity
BN117_4407	COG0140	phosphoribosyl-ATP diphosphatase activity
BN117_4408	COG0537	adenosine 5'-monophosphoramidase activity
BN117_4409	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BN117_4410	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BN117_4414	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BN117_4415	COG1970	mechanosensitive ion channel activity
BN117_4416	COG0723	plastoquinol--plastocyanin reductase activity
BN117_4417	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BN117_4418	COG2857	Cytochrome c1
BN117_4419	COG0625	glutathione transferase activity
BN117_4420	COG2969	positive regulation of protein catabolic process
BN117_4425	COG0583	DNA-binding transcription factor activity
BN117_4426	COG0492	ferredoxin-NADP+ reductase activity
BN117_4430	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_4432	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BN117_4435	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_4442	COG3702	type iv secretory pathway
BN117_4446	COG3736	Type IV secretory pathway, component VirB8
BN117_4448	COG2948	multi-organism process
BN117_4449	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
BN117_4450	COG0697	spore germination
BN117_4454	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BN117_4455	COG0747	negative chemotaxis
BN117_4456	COG0601	transmembrane transport
BN117_4457	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BN117_4459	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BN117_4461	COG0513	Belongs to the DEAD box helicase family
BN117_4462	COG1280	lysine exporter protein (LysE YggA)
BN117_4463	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BN117_4467	COG0583	DNA-binding transcription factor activity
BN117_4469	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BN117_4471	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BN117_4472	COG0154	amidase activity
BN117_4477	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BN117_4478	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BN117_4479	COG3842	ATPase activity
BN117_4480	COG1653	transport
BN117_4481	COG1175	transmembrane transport
BN117_4482	COG0395	ABC-type sugar transport system, permease component
BN117_4485	COG0018	arginyl-trna synthetase
BN117_4489	COG1280	lysine exporter protein (LysE YggA)
BN117_4492	COG1960	acyl-CoA dehydrogenase activity
BN117_4493	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
BN117_4494	COG0183	Belongs to the thiolase family
BN117_4495	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BN117_4498	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BN117_4499	COG3181	Tripartite tricarboxylate transporter family receptor
BN117_4501	COG2358	TRAP transporter, solute receptor (TAXI family
BN117_4503	COG1629	transport
BN117_4504	COG2922	Belongs to the Smg family
BN117_4505	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BN117_4510	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_4511	COG1028	Short-chain dehydrogenase reductase Sdr
BN117_4512	COG1012	belongs to the aldehyde dehydrogenase family
BN117_4514	COG0028	Belongs to the TPP enzyme family
BN117_4515	COG1522	sequence-specific DNA binding
BN117_4516	COG3781	membrane
BN117_4522	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BN117_4527	COG1304	FMN binding
BN117_4530	COG0154	amidase activity
BN117_4531	COG1414	Transcriptional regulator
BN117_4534	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BN117_4535	COG0230	Belongs to the bacterial ribosomal protein bL34 family
BN117_4536	COG0594	ribonuclease P activity
BN117_4537	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BN117_4538	COG0706	membrane insertase activity
BN117_4539	COG0753	catalase activity
BN117_4540	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BN117_4541	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BN117_4543	COG2175	clavaminate synthase activity
BN117_4544	COG1473	amidohydrolase
BN117_4545	COG4608	Belongs to the ABC transporter superfamily
BN117_4548	COG0601	transmembrane transport
BN117_4549	COG0747	negative chemotaxis
BN117_4557	COG0436	Aminotransferase
BN117_4558	COG1278	Cold shock
BN117_p08	COG0252	asparaginase activity