locus-tag	class	description
FYA53_RS00010	COG0357	Ribosomal RNA small subunit methyltransferase G
FYA53_RS00015	COG1192	Involved in chromosome partitioning
FYA53_RS00025	COG1475	DNA binding
FYA53_RS00030	COG0252	asparaginase activity
FYA53_RS00050	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYA53_RS00060	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYA53_RS00075	COG0081	regulation of translation
FYA53_RS00080	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FYA53_RS00085	COG0222	ribosome binding
FYA53_RS00095	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FYA53_RS00130	COG1230	cation diffusion facilitator family transporter
FYA53_RS00140	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FYA53_RS00145	COG0049	tRNA binding
FYA53_RS00155	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FYA53_RS00165	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FYA53_RS00175	COG0089	rRNA binding
FYA53_RS00180	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FYA53_RS00190	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FYA53_RS00195	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FYA53_RS00200	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FYA53_RS00205	COG0255	Belongs to the universal ribosomal protein uL29 family
FYA53_RS00210	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FYA53_RS00230	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FYA53_RS00235	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FYA53_RS00240	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FYA53_RS00245	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FYA53_RS00250	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FYA53_RS00260	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FYA53_RS00265	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FYA53_RS00270	COG1841	ribosomal large subunit assembly
FYA53_RS00280	COG0201	protein transport
FYA53_RS00285	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYA53_RS00290	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FYA53_RS00295	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FYA53_RS00300	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FYA53_RS00305	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FYA53_RS00310	COG0202	RNA polymerase activity
FYA53_RS00315	COG0203	ribosomal protein L17
FYA53_RS00320	COG0537	adenosine 5'-monophosphoramidase activity
FYA53_RS00325	COG1324	tolerance protein
FYA53_RS00330	COG4232	protein-disulfide reductase activity
FYA53_RS00345	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FYA53_RS00355	COG1333	cytochrome c biogenesis protein
FYA53_RS00360	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA53_RS00385	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FYA53_RS00390	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FYA53_RS00410	COG2814	Major facilitator Superfamily
FYA53_RS00455	COG0402	S-adenosylhomocysteine deaminase activity
FYA53_RS00465	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS00485	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS00515	COG2186	Transcriptional regulator
FYA53_RS00535	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA53_RS00540	COG1956	GAF domain-containing protein
FYA53_RS00545	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA53_RS00575	COG0531	amino acid
FYA53_RS00605	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FYA53_RS00610	COG3568	Endonuclease Exonuclease Phosphatase
FYA53_RS00615	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA53_RS00635	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA53_RS00645	COG0367	asparagine synthase
FYA53_RS00665	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYA53_RS00670	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FYA53_RS00710	COG0367	asparagine synthase
FYA53_RS00715	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FYA53_RS00740	COG0367	asparagine synthase
FYA53_RS00750	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS00770	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS00775	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FYA53_RS00780	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYA53_RS00810	COG0859	PFAM glycosyl transferase family 9
FYA53_RS00840	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYA53_RS00845	COG1127	ABC transporter
FYA53_RS00865	COG1686	Belongs to the peptidase S11 family
FYA53_RS00905	COG2096	Adenosyltransferase
FYA53_RS00930	COG0523	cobalamin synthesis protein
FYA53_RS00935	COG0735	belongs to the Fur family
FYA53_RS00945	COG1121	(ABC) transporter
FYA53_RS00955	COG0803	Belongs to the bacterial solute-binding protein 9 family
FYA53_RS00965	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FYA53_RS00975	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FYA53_RS00985	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FYA53_RS00990	COG1560	Kdo2-lipid A biosynthetic process
FYA53_RS01000	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FYA53_RS01020	COG1950	PFAM Membrane protein of
FYA53_RS01030	COG0583	DNA-binding transcription factor activity
FYA53_RS01040	COG0477	Major facilitator Superfamily
FYA53_RS01065	COG0513	Belongs to the DEAD box helicase family
FYA53_RS01075	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA53_RS01080	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYA53_RS01095	COG0735	belongs to the Fur family
FYA53_RS01115	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS01140	COG0640	Transcriptional regulator
FYA53_RS01200	COG0583	DNA-binding transcription factor activity
FYA53_RS01215	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FYA53_RS01220	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA53_RS01225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS01240	COG0758	DNA mediated transformation
FYA53_RS01245	COG1522	sequence-specific DNA binding
FYA53_RS01255	COG0242	peptide deformylase activity
FYA53_RS01270	COG0546	phosphoglycolate phosphatase activity
FYA53_RS01290	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FYA53_RS01295	COG1942	4-Oxalocrotonate Tautomerase
FYA53_RS01300	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS01335	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FYA53_RS01335	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA53_RS01345	COG5000	phosphorelay sensor kinase activity
FYA53_RS01350	COG2204	response regulator
FYA53_RS01375	COG2068	MobA-Related Protein
FYA53_RS01390	COG0596	Alpha beta hydrolase
FYA53_RS01400	COG1335	isochorismatase
FYA53_RS01425	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA53_RS01450	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA53_RS01455	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS01475	COG2226	methyltransferase
FYA53_RS01490	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS01500	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FYA53_RS01505	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA53_RS01510	COG1054	Belongs to the UPF0176 family
FYA53_RS01520	COG4942	peptidase
FYA53_RS01525	COG0793	Belongs to the peptidase S41A family
FYA53_RS01530	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FYA53_RS01550	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA53_RS01585	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FYA53_RS01590	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FYA53_RS01595	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FYA53_RS01605	COG0142	geranyltranstransferase activity
FYA53_RS01615	COG0583	DNA-binding transcription factor activity
FYA53_RS01625	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
FYA53_RS01630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS01645	COG2994	toxin metabolic process
FYA53_RS01655	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
FYA53_RS01660	COG2274	protein secretion by the type I secretion system
FYA53_RS01665	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA53_RS01670	COG1538	Outer membrane efflux protein
FYA53_RS01685	COG0765	amino acid transport
FYA53_RS01690	COG0765	amino acid transport
FYA53_RS01695	COG1126	abc transporter atp-binding protein
FYA53_RS01715	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS01725	COG1802	Transcriptional regulator
FYA53_RS01740	COG1802	Transcriptional regulator
FYA53_RS01750	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS01760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS01790	COG0583	DNA-binding transcription factor activity
FYA53_RS01795	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS01800	COG2301	Belongs to the HpcH HpaI aldolase family
FYA53_RS01805	COG2188	Transcriptional regulator
FYA53_RS01850	COG0583	DNA-binding transcription factor activity
FYA53_RS01855	COG1024	Enoyl-CoA hydratase
FYA53_RS01890	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS01905	COG1902	pentaerythritol trinitrate reductase activity
FYA53_RS01930	COG0745	RESPONSE REGULATOR receiver
FYA53_RS01970	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA53_RS01975	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FYA53_RS01985	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS02055	COG4211	Belongs to the binding-protein-dependent transport system permease family
FYA53_RS02065	COG0683	leucine binding
FYA53_RS02070	COG0154	amidase activity
FYA53_RS02075	COG0288	reversible hydration of carbon dioxide
FYA53_RS02095	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA53_RS02110	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FYA53_RS02120	COG1414	Transcriptional regulator
FYA53_RS02125	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS02130	COG2031	fatty acid transporter
FYA53_RS02135	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS02170	COG2808	Putative FMN-binding domain
FYA53_RS02175	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA53_RS02180	COG0747	negative chemotaxis
FYA53_RS02185	COG0657	acetylesterase activity
FYA53_RS02195	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA53_RS02200	COG2207	Transcriptional regulator
FYA53_RS02225	COG1538	Outer membrane efflux protein
FYA53_RS02240	COG0583	DNA-binding transcription factor activity
FYA53_RS02245	COG0628	permease
FYA53_RS02255	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYA53_RS02260	COG0251	oxidation-reduction process
FYA53_RS02270	COG0330	HflC and HflK could
FYA53_RS02275	COG3422	double-strand break repair
FYA53_RS02290	COG0583	DNA-binding transcription factor activity
FYA53_RS02325	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS02330	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS02335	COG1414	Transcriptional regulator
FYA53_RS02340	COG1024	Enoyl-CoA hydratase
FYA53_RS02345	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA53_RS02350	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS02355	COG0604	alcohol dehydrogenase
FYA53_RS02360	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS02365	COG0583	DNA-binding transcription factor activity
FYA53_RS02375	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS02390	COG0251	oxidation-reduction process
FYA53_RS02400	COG2031	fatty acid transporter
FYA53_RS02430	COG1278	Cold shock
FYA53_RS02435	COG0583	DNA-binding transcription factor activity
FYA53_RS02445	COG3119	arylsulfatase activity
FYA53_RS02460	COG1228	amidohydrolase
FYA53_RS02465	COG0523	cobalamin synthesis protein
FYA53_RS02470	COG1819	glycosyl
FYA53_RS02555	COG0625	glutathione transferase activity
FYA53_RS02570	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA53_RS02575	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FYA53_RS02580	COG1652	LysM domain
FYA53_RS02605	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS02610	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA53_RS02645	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA53_RS02700	COG0583	DNA-binding transcription factor activity
FYA53_RS02705	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS02715	COG1024	Enoyl-CoA hydratase
FYA53_RS02720	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS02745	COG0028	Belongs to the TPP enzyme family
FYA53_RS02755	COG1024	Enoyl-CoA hydratase
FYA53_RS02755	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS02760	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS02765	COG1414	Transcriptional regulator
FYA53_RS02785	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS02790	COG1609	Transcriptional regulator
FYA53_RS02815	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA53_RS02820	COG1024	Enoyl-CoA hydratase
FYA53_RS02835	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS02840	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS02845	COG0583	DNA-binding transcription factor activity
FYA53_RS02860	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS02870	COG0066	3-isopropylmalate dehydratase activity
FYA53_RS02875	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FYA53_RS02885	COG1053	succinate dehydrogenase
FYA53_RS02885	COG3976	FMN-binding domain protein
FYA53_RS02920	COG0683	leucine binding
FYA53_RS02930	COG1309	transcriptional regulator
FYA53_RS02950	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS02955	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS02960	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS02965	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS02975	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FYA53_RS02985	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FYA53_RS02990	COG1053	succinate dehydrogenase
FYA53_RS03000	COG2030	dehydratase
FYA53_RS03010	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS03015	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS03020	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS03045	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA53_RS03065	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYA53_RS03065	COG1902	pentaerythritol trinitrate reductase activity
FYA53_RS03080	COG0427	acetyl-CoA hydrolase
FYA53_RS03085	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS03100	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FYA53_RS03120	COG0183	Belongs to the thiolase family
FYA53_RS03125	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA53_RS03135	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS03140	COG0583	DNA-binding transcription factor activity
FYA53_RS03145	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS03160	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FYA53_RS03185	COG1309	transcriptional regulator
FYA53_RS03195	COG1024	Enoyl-CoA hydratase
FYA53_RS03215	COG1024	Enoyl-CoA hydratase
FYA53_RS03220	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS03225	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS03230	COG1454	alcohol dehydrogenase
FYA53_RS03235	COG1024	Enoyl-CoA hydratase
FYA53_RS03260	COG0431	NADPH-dependent FMN reductase
FYA53_RS03265	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS03270	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA53_RS03285	COG1414	Transcriptional regulator
FYA53_RS03290	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA53_RS03295	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS03300	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS03325	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS03345	COG1024	Enoyl-CoA hydratase
FYA53_RS03355	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS03360	COG1024	Enoyl-CoA hydratase
FYA53_RS03365	COG0183	Belongs to the thiolase family
FYA53_RS03370	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS03385	COG0583	DNA-binding transcription factor activity
FYA53_RS03390	COG2267	carboxylic ester hydrolase activity
FYA53_RS03405	COG0625	glutathione transferase activity
FYA53_RS03410	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS03420	COG2186	Transcriptional regulator
FYA53_RS03425	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS03430	COG0626	cystathionine gamma-synthase activity
FYA53_RS03470	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA53_RS03475	COG0436	Aminotransferase
FYA53_RS03480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS03485	COG0765	amino acid transport
FYA53_RS03495	COG1473	amidohydrolase
FYA53_RS03500	COG1414	Transcriptional regulator
FYA53_RS03510	COG0154	amidase activity
FYA53_RS03570	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA53_RS03585	COG3135	benzoate transporter
FYA53_RS03630	COG5444	nuclease activity
FYA53_RS03750	COG3468	outer membrane autotransporter barrel domain protein
FYA53_RS03815	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYA53_RS03860	COG0489	protein tyrosine kinase activity
FYA53_RS03905	COG2081	HI0933 family
FYA53_RS03910	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA53_RS03925	COG0509	glycine decarboxylation via glycine cleavage system
FYA53_RS03950	COG1024	Enoyl-CoA hydratase
FYA53_RS03970	COG4172	Belongs to the ABC transporter superfamily
FYA53_RS03975	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS03980	COG0601	transmembrane transport
FYA53_RS03985	COG0747	negative chemotaxis
FYA53_RS03995	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA53_RS04025	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYA53_RS04030	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FYA53_RS04045	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS04060	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS04065	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS04070	COG0166	Belongs to the GPI family
FYA53_RS04085	COG0277	FAD linked oxidase domain protein
FYA53_RS04090	COG0745	RESPONSE REGULATOR receiver
FYA53_RS04095	COG0642	Histidine kinase
FYA53_RS04100	COG1368	sulfuric ester hydrolase activity
FYA53_RS04185	COG0012	GTP binding
FYA53_RS04200	COG0745	RESPONSE REGULATOR receiver
FYA53_RS04205	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS04210	COG1309	transcriptional regulator
FYA53_RS04220	COG2814	Major facilitator Superfamily
FYA53_RS04245	COG0280	phosphate acetyltransferase
FYA53_RS04245	COG0281	malic enzyme
FYA53_RS04255	COG0601	transmembrane transport
FYA53_RS04260	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS04265	COG4172	Belongs to the ABC transporter superfamily
FYA53_RS04280	COG0583	DNA-binding transcription factor activity
FYA53_RS04295	COG0640	Transcriptional regulator
FYA53_RS04310	COG3135	benzoate transporter
FYA53_RS04315	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA53_RS04320	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FYA53_RS04325	COG0742	ribosomal rna small subunit methyltransferase
FYA53_RS04340	COG3639	organic phosphonate transmembrane transporter activity
FYA53_RS04345	COG3639	organic phosphonate transmembrane transporter activity
FYA53_RS04375	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FYA53_RS04380	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA53_RS04390	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FYA53_RS04395	COG1058	Belongs to the CinA family
FYA53_RS04395	COG1546	Belongs to the CinA family
FYA53_RS04400	COG0284	orotidine-5'-phosphate decarboxylase activity
FYA53_RS04405	COG1252	NADH dehydrogenase
FYA53_RS04430	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FYA53_RS04450	COG1053	succinate dehydrogenase
FYA53_RS04460	COG0583	DNA-binding transcription factor activity
FYA53_RS04465	COG1053	succinate dehydrogenase
FYA53_RS04470	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS04475	COG1414	Transcriptional regulator
FYA53_RS04490	COG1335	isochorismatase
FYA53_RS04505	COG0405	Gamma-glutamyltransferase
FYA53_RS04520	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS04525	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS04530	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS04535	COG0583	DNA-binding transcription factor activity
FYA53_RS04560	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS04565	COG0583	DNA-binding transcription factor activity
FYA53_RS04570	COG2199	diguanylate cyclase activity
FYA53_RS04625	COG1024	Enoyl-CoA hydratase
FYA53_RS04625	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS04630	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS04645	COG1024	Enoyl-CoA hydratase
FYA53_RS04650	COG1024	Enoyl-CoA hydratase
FYA53_RS04655	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS04660	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS04700	COG3685	Protein conserved in bacteria
FYA53_RS04710	COG0387	Pfam Sodium calcium exchanger
FYA53_RS04715	COG3795	YCII-related domain
FYA53_RS04720	COG2188	Transcriptional regulator
FYA53_RS04745	COG0154	amidase activity
FYA53_RS04750	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS04755	COG1024	Enoyl-CoA hydratase
FYA53_RS04765	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS04780	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS04785	COG1414	Transcriptional regulator
FYA53_RS04800	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA53_RS04805	COG0251	oxidation-reduction process
FYA53_RS04810	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA53_RS04830	COG1902	pentaerythritol trinitrate reductase activity
FYA53_RS04835	COG0583	DNA-binding transcription factor activity
FYA53_RS04845	COG0590	tRNA wobble adenosine to inosine editing
FYA53_RS04850	COG2807	transmembrane transport
FYA53_RS04855	COG0307	riboflavin synthase, alpha
FYA53_RS04860	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS04865	COG1522	sequence-specific DNA binding
FYA53_RS04875	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS04885	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS04925	COG1418	mRNA catabolic process
FYA53_RS04935	COG1335	isochorismatase
FYA53_RS04960	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA53_RS04965	COG2274	protein secretion by the type I secretion system
FYA53_RS04975	COG1538	Outer membrane efflux protein
FYA53_RS04980	COG0493	'glutamate synthase
FYA53_RS04980	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA53_RS04990	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FYA53_RS05000	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS05010	COG1309	transcriptional regulator
FYA53_RS05015	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS05020	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS05025	COG2076	Multidrug Resistance protein
FYA53_RS05030	COG1309	transcriptional regulator
FYA53_RS05050	COG0840	transmembrane signaling receptor activity
FYA53_RS05065	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA53_RS05090	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS05100	COG1024	Enoyl-CoA hydratase
FYA53_RS05110	COG2199	diguanylate cyclase activity
FYA53_RS05110	COG2203	Gaf domain
FYA53_RS05130	COG0154	amidase activity
FYA53_RS05135	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA53_RS05135	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA53_RS05160	COG3945	hemerythrin HHE cation binding domain
FYA53_RS05175	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA53_RS05175	COG2169	Transcriptional regulator
FYA53_RS05195	COG1271	oxidase subunit
FYA53_RS05200	COG1294	oxidase, subunit
FYA53_RS05210	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA53_RS05240	COG0596	Alpha beta hydrolase
FYA53_RS05245	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYA53_RS05280	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FYA53_RS05285	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FYA53_RS05295	COG2070	2-Nitropropane dioxygenase
FYA53_RS05310	COG2207	Transcriptional regulator
FYA53_RS05310	COG1917	Cupin 2, conserved barrel domain protein
FYA53_RS05330	COG2900	Belongs to the SlyX family
FYA53_RS05340	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA53_RS05370	COG0583	DNA-binding transcription factor activity
FYA53_RS05375	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS05385	COG0583	DNA-binding transcription factor activity
FYA53_RS05410	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FYA53_RS05420	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA53_RS05425	COG1845	cytochrome c oxidase, subunit III
FYA53_RS05430	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FYA53_RS05435	COG0640	Transcriptional regulator
FYA53_RS05500	COG1666	GTP binding
FYA53_RS05525	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS05535	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FYA53_RS05540	COG1845	cytochrome c oxidase, subunit III
FYA53_RS05545	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA53_RS05550	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FYA53_RS05555	COG0477	Major facilitator Superfamily
FYA53_RS05570	COG5006	permease, DMT superfamily
FYA53_RS05590	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FYA53_RS05605	COG3383	formate dehydrogenase (NAD+) activity
FYA53_RS05625	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FYA53_RS05630	COG0303	'Molybdopterin
FYA53_RS05635	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA53_RS05645	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FYA53_RS05660	COG0412	Dienelactone hydrolase
FYA53_RS05670	COG0678	peroxiredoxin activity
FYA53_RS05680	COG0697	spore germination
FYA53_RS05725	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA53_RS05730	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FYA53_RS05735	COG1335	isochorismatase
FYA53_RS05740	COG0523	cobalamin synthesis protein
FYA53_RS05745	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS05760	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS05770	COG1802	Transcriptional regulator
FYA53_RS05790	COG0667	Aldo Keto reductase
FYA53_RS05800	COG4535	Mg2 and Co2 transporter CorC
FYA53_RS05810	COG1702	phosphate starvation-inducible protein PhoH
FYA53_RS05825	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA53_RS05830	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA53_RS05835	COG1862	Preprotein translocase
FYA53_RS05840	COG0343	queuine tRNA-ribosyltransferase activity
FYA53_RS05850	COG2027	D-alanyl-D-alanine carboxypeptidase
FYA53_RS05895	COG0741	lytic transglycosylase activity
FYA53_RS05900	COG0436	Aminotransferase
FYA53_RS05910	COG0280	phosphate acetyltransferase
FYA53_RS05910	COG0281	malic enzyme
FYA53_RS05920	COG2732	(Barnase) inhibitor
FYA53_RS05925	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FYA53_RS05930	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYA53_RS05935	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYA53_RS05945	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FYA53_RS05950	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYA53_RS05965	COG0625	glutathione transferase activity
FYA53_RS05995	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FYA53_RS06005	COG0306	phosphate transporter
FYA53_RS06010	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA53_RS06020	COG0739	heme binding
FYA53_RS06030	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FYA53_RS06080	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FYA53_RS06105	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FYA53_RS06110	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FYA53_RS06115	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FYA53_RS06120	COG0009	L-threonylcarbamoyladenylate synthase
FYA53_RS06125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS06130	COG1414	Transcriptional regulator
FYA53_RS06145	COG0765	amino acid transport
FYA53_RS06150	COG1126	abc transporter atp-binding protein
FYA53_RS06170	COG0028	Belongs to the TPP enzyme family
FYA53_RS06175	COG0583	DNA-binding transcription factor activity
FYA53_RS06180	COG4974	Belongs to the 'phage' integrase family
FYA53_RS06185	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYA53_RS06190	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
FYA53_RS06200	COG1686	Belongs to the peptidase S11 family
FYA53_RS06210	COG2814	Major facilitator Superfamily
FYA53_RS06220	COG1074	ATP-dependent DNA helicase activity
FYA53_RS06230	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FYA53_RS06245	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS06250	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA53_RS06260	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS06270	COG0505	Belongs to the CarA family
FYA53_RS06275	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FYA53_RS06310	COG0613	PHP domain protein
FYA53_RS06325	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA53_RS06325	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA53_RS06330	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA53_RS06335	COG0047	phosphoribosylformylglycinamidine synthase activity
FYA53_RS06335	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FYA53_RS06340	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA53_RS06340	COG3210	domain, Protein
FYA53_RS06340	COG3064	Membrane
FYA53_RS06360	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS06380	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA53_RS06400	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FYA53_RS06405	COG2197	response regulator
FYA53_RS06445	COG1061	Type III restriction enzyme res subunit
FYA53_RS06450	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FYA53_RS06470	COG0477	Major facilitator Superfamily
FYA53_RS06475	COG2814	Major facilitator Superfamily
FYA53_RS06490	COG0625	glutathione transferase activity
FYA53_RS06505	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FYA53_RS06520	COG3618	amidohydrolase
FYA53_RS06535	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS06555	COG2079	MmgE PrpD family protein
FYA53_RS06560	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS06595	COG1280	lysine exporter protein (LysE YggA)
FYA53_RS06610	COG0747	negative chemotaxis
FYA53_RS06615	COG0601	transmembrane transport
FYA53_RS06625	COG4172	Belongs to the ABC transporter superfamily
FYA53_RS06630	COG1609	Transcriptional regulator
FYA53_RS06645	COG0789	Transcriptional regulator
FYA53_RS06670	COG2188	Transcriptional regulator
FYA53_RS06675	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS06695	COG1802	Transcriptional regulator
FYA53_RS06715	COG0842	Transport permease protein
FYA53_RS06740	COG0656	L-ascorbic acid biosynthetic process
FYA53_RS06745	COG3284	Transcriptional regulator
FYA53_RS06750	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS06765	COG2733	membrane
FYA53_RS06770	COG0583	DNA-binding transcription factor activity
FYA53_RS06775	COG0384	phenazine biosynthesis protein PhzF
FYA53_RS06780	COG5507	3-demethylubiquinone-9 3-methyltransferase
FYA53_RS06815	COG0659	secondary active sulfate transmembrane transporter activity
FYA53_RS06840	COG1132	(ABC) transporter
FYA53_RS06880	COG2207	Transcriptional regulator
FYA53_RS06915	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA53_RS06920	COG1280	lysine exporter protein (LysE YggA)
FYA53_RS06940	COG0625	glutathione transferase activity
FYA53_RS06955	COG0697	spore germination
FYA53_RS06990	COG3246	L-lysine catabolic process to acetate
FYA53_RS06995	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS07000	COG0583	DNA-binding transcription factor activity
FYA53_RS07015	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA53_RS07020	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA53_RS07025	COG3622	Belongs to the hyi family
FYA53_RS07035	COG0129	dihydroxy-acid dehydratase activity
FYA53_RS07050	COG0129	dihydroxy-acid dehydratase activity
FYA53_RS07055	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS07065	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA53_RS07080	COG2188	Transcriptional regulator
FYA53_RS07090	COG0583	DNA-binding transcription factor activity
FYA53_RS07100	COG0501	Belongs to the peptidase M48B family
FYA53_RS07110	COG2814	Major facilitator Superfamily
FYA53_RS07115	COG0583	DNA-binding transcription factor activity
FYA53_RS07150	COG4691	Plasmid stability protein
FYA53_RS07180	COG2837	iron assimilation
FYA53_RS07200	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA53_RS07205	COG1335	isochorismatase
FYA53_RS07265	COG2346	COG2346, Truncated hemoglobins
FYA53_RS07275	COG1126	abc transporter atp-binding protein
FYA53_RS07280	COG0765	amino acid transport
FYA53_RS07285	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS07295	COG0789	Transcriptional regulator
FYA53_RS07305	COG0165	Argininosuccinate lyase
FYA53_RS07310	COG0668	transmembrane transport
FYA53_RS07360	COG0747	negative chemotaxis
FYA53_RS07365	COG0601	transmembrane transport
FYA53_RS07370	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS07380	COG1280	lysine exporter protein (LysE YggA)
FYA53_RS07395	COG3161	chorismate lyase activity
FYA53_RS07400	COG1187	pseudouridine synthase activity
FYA53_RS07410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA53_RS07430	COG1999	signal sequence binding
FYA53_RS07435	COG0339	signal peptide processing
FYA53_RS07440	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FYA53_RS07445	COG4566	intracellular signal transduction
FYA53_RS07455	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FYA53_RS07460	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA53_RS07465	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA53_RS07470	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FYA53_RS07500	COG0745	RESPONSE REGULATOR receiver
FYA53_RS07505	COG0643	Histidine kinase
FYA53_RS07505	COG2198	Histidine kinase
FYA53_RS07515	COG0840	transmembrane signaling receptor activity
FYA53_RS07520	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FYA53_RS07530	COG0745	RESPONSE REGULATOR receiver
FYA53_RS07535	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FYA53_RS07570	COG1815	bacterial-type flagellum-dependent cell motility
FYA53_RS07575	COG1558	bacterial-type flagellum-dependent cell motility
FYA53_RS07585	COG1749	Flagellar hook protein flgE
FYA53_RS07615	COG1256	bacterial-type flagellum assembly
FYA53_RS07625	COG0840	transmembrane signaling receptor activity
FYA53_RS07645	COG1338	Plays a role in the flagellum-specific transport system
FYA53_RS07665	COG1580	Controls the rotational direction of flagella during chemotaxis
FYA53_RS07680	COG1157	protein secretion by the type III secretion system
FYA53_RS07685	COG1317	bacterial-type flagellum organization
FYA53_RS07690	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA53_RS07700	COG1677	Flagellar hook-basal body complex protein FliE
FYA53_RS07710	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYA53_RS07740	COG0285	dihydrofolate synthase activity
FYA53_RS07775	COG0024	Methionine aminopeptidase
FYA53_RS07780	COG0052	Belongs to the universal ribosomal protein uS2 family
FYA53_RS07795	COG0233	cytoplasmic translational termination
FYA53_RS07800	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYA53_RS07815	COG0750	zinc metalloprotease
FYA53_RS07820	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA53_RS07825	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FYA53_RS07850	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FYA53_RS07855	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA53_RS07880	COG0330	HflC and HflK could
FYA53_RS07895	COG2867	negative regulation of translational initiation
FYA53_RS07905	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS07910	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FYA53_RS07935	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FYA53_RS07940	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA53_RS07945	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FYA53_RS07950	COG0084	hydrolase, TatD family'
FYA53_RS07975	COG1126	abc transporter atp-binding protein
FYA53_RS07985	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FYA53_RS07990	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS08000	COG0028	Belongs to the TPP enzyme family
FYA53_RS08030	COG3189	MarR family transcriptional regulator
FYA53_RS08060	COG1595	DNA-templated transcription, initiation
FYA53_RS08070	COG0861	Integral membrane protein TerC family
FYA53_RS08095	COG2988	succinylglutamate desuccinylase activity
FYA53_RS08110	COG1253	flavin adenine dinucleotide binding
FYA53_RS08120	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS08125	COG2084	Dehydrogenase
FYA53_RS08155	COG2814	Major facilitator Superfamily
FYA53_RS08165	COG0583	DNA-binding transcription factor activity
FYA53_RS08195	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYA53_RS08200	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYA53_RS08205	COG0840	transmembrane signaling receptor activity
FYA53_RS08230	COG3468	outer membrane autotransporter barrel domain protein
FYA53_RS08235	COG3468	outer membrane autotransporter barrel domain protein
FYA53_RS08270	COG5265	(ABC) transporter
FYA53_RS08280	COG0667	Aldo Keto reductase
FYA53_RS08295	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA53_RS08335	COG1959	2 iron, 2 sulfur cluster binding
FYA53_RS08360	COG0400	carboxylic ester hydrolase activity
FYA53_RS08370	COG1566	PFAM secretion protein HlyD family protein
FYA53_RS08395	COG0235	Class ii aldolase
FYA53_RS08400	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA53_RS08405	COG0720	synthase
FYA53_RS08410	COG0602	queuosine metabolic process
FYA53_RS08430	COG4208	sulfate ABC transporter
FYA53_RS08440	COG0175	sulfate reduction
FYA53_RS08470	COG0335	large ribosomal subunit rRNA binding
FYA53_RS08480	COG0667	Aldo Keto reductase
FYA53_RS08485	COG1162	GTPase activity
FYA53_RS08490	COG0501	Belongs to the peptidase M48B family
FYA53_RS08495	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FYA53_RS08510	COG3396	Phenylacetate-CoA oxygenase
FYA53_RS08515	COG3460	Phenylacetate-CoA oxygenase
FYA53_RS08520	COG3396	Phenylacetate-CoA oxygenase
FYA53_RS08525	COG2151	metal-sulfur cluster biosynthetic enzyme
FYA53_RS08530	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA53_RS08535	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS08540	COG1024	Enoyl-CoA hydratase
FYA53_RS08545	COG2050	protein possibly involved in aromatic compounds catabolism
FYA53_RS08560	COG3539	Fimbrial protein
FYA53_RS08565	COG3539	Fimbrial protein
FYA53_RS08570	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA53_RS08570	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA53_RS08580	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA53_RS08585	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FYA53_RS08600	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYA53_RS08605	COG3842	ATPase activity
FYA53_RS08610	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA53_RS08615	COG1177	transmembrane transport
FYA53_RS08640	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS08650	COG0704	Plays a role in the regulation of phosphate uptake
FYA53_RS08660	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FYA53_RS08665	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FYA53_RS08665	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYA53_RS08670	COG1643	Atp-dependent helicase
FYA53_RS08685	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS08690	COG0726	polysaccharide deacetylase
FYA53_RS08695	COG0463	Glycosyl transferase, family 2
FYA53_RS08700	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS08705	COG2194	sulfuric ester hydrolase activity
FYA53_RS08730	COG0859	PFAM glycosyl transferase family 9
FYA53_RS08735	COG1132	(ABC) transporter
FYA53_RS08750	COG0077	Prephenate dehydratase
FYA53_RS08755	COG1530	ribonuclease E activity
FYA53_RS08795	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS08800	COG0154	amidase activity
FYA53_RS08830	COG2814	Major facilitator Superfamily
FYA53_RS08850	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FYA53_RS08855	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FYA53_RS08860	COG2814	Major facilitator Superfamily
FYA53_RS08865	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYA53_RS08875	COG4176	ABC-type proline glycine betaine transport system permease component
FYA53_RS08885	COG1942	4-Oxalocrotonate Tautomerase
FYA53_RS08890	COG0183	Belongs to the thiolase family
FYA53_RS08900	COG1802	Transcriptional regulator
FYA53_RS08910	COG1024	Enoyl-CoA hydratase
FYA53_RS08915	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS08925	COG2032	superoxide dismutase activity
FYA53_RS08940	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FYA53_RS08965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA53_RS08980	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FYA53_RS09000	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FYA53_RS09015	COG2224	Isocitrate lyase
FYA53_RS09025	COG1346	cytolysis
FYA53_RS09030	COG1380	Effector of murein hydrolase LrgA
FYA53_RS09035	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FYA53_RS09035	COG4106	trans-aconitate 2-methyltransferase activity
FYA53_RS09065	COG3278	Belongs to the heme-copper respiratory oxidase family
FYA53_RS09110	COG1131	(ABC) transporter
FYA53_RS09115	COG0842	Transport permease protein
FYA53_RS09120	COG0628	permease
FYA53_RS09135	COG2814	Major facilitator Superfamily
FYA53_RS09140	COG2841	Protein conserved in bacteria
FYA53_RS09170	COG0765	amino acid transport
FYA53_RS09175	COG0765	amino acid transport
FYA53_RS09180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS09215	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA53_RS09220	COG1595	DNA-templated transcription, initiation
FYA53_RS09230	COG3530	Putative quorum-sensing-regulated virulence factor
FYA53_RS09235	COG0494	nUDIX hydrolase
FYA53_RS09250	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA53_RS09275	COG5564	TIM-barrel signal transduction protein
FYA53_RS09290	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FYA53_RS09325	COG1131	(ABC) transporter
FYA53_RS09345	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
FYA53_RS09345	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
FYA53_RS09350	COG1562	ergosterol biosynthetic process
FYA53_RS09355	COG1562	ergosterol biosynthetic process
FYA53_RS09360	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA53_RS09380	COG2304	oxidoreductase activity
FYA53_RS09440	COG1047	Peptidyl-prolyl cis-trans
FYA53_RS09445	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FYA53_RS09450	COG0625	glutathione transferase activity
FYA53_RS09470	COG0523	cobalamin synthesis protein
FYA53_RS09480	COG0583	DNA-binding transcription factor activity
FYA53_RS09490	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FYA53_RS09505	COG2251	uridine kinase activity
FYA53_RS09505	COG0195	Participates in both transcription termination and antitermination
FYA53_RS09540	COG1611	Belongs to the LOG family
FYA53_RS09555	COG0412	Dienelactone hydrolase
FYA53_RS09560	COG1283	sodium-dependent phosphate transmembrane transporter activity
FYA53_RS09565	COG1760	l-serine dehydratase
FYA53_RS09570	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FYA53_RS09585	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FYA53_RS09610	COG2311	Membrane
FYA53_RS09620	COG2358	TRAP transporter, solute receptor (TAXI family
FYA53_RS09625	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA53_RS09665	COG3395	kinase activity
FYA53_RS09670	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FYA53_RS09705	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS09745	COG4964	Belongs to the GSP D family
FYA53_RS09780	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA53_RS09790	COG1295	ribonuclease BN
FYA53_RS09805	COG0745	RESPONSE REGULATOR receiver
FYA53_RS09810	COG2205	protein histidine kinase activity
FYA53_RS09815	COG5001	Diguanylate cyclase
FYA53_RS09830	COG1763	Mo-molybdopterin cofactor biosynthetic process
FYA53_RS09835	COG0303	'Molybdopterin
FYA53_RS09840	COG0746	molybdenum cofactor guanylyltransferase activity
FYA53_RS09845	COG0489	protein tyrosine kinase activity
FYA53_RS09875	COG0243	molybdopterin cofactor binding
FYA53_RS09875	COG3383	formate dehydrogenase (NAD+) activity
FYA53_RS09880	COG0437	4 iron, 4 sulfur cluster binding
FYA53_RS09910	COG1122	ATPase activity
FYA53_RS09935	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FYA53_RS09950	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA53_RS10015	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA53_RS10025	COG2197	response regulator
FYA53_RS10030	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FYA53_RS10035	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FYA53_RS10050	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA53_RS10055	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA53_RS10065	COG1764	response to oxidative stress
FYA53_RS10070	COG2423	ornithine cyclodeaminase activity
FYA53_RS10080	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS10085	COG0765	amino acid transport
FYA53_RS10090	COG0765	amino acid transport
FYA53_RS10095	COG1126	abc transporter atp-binding protein
FYA53_RS10120	COG1522	sequence-specific DNA binding
FYA53_RS10130	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FYA53_RS10135	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FYA53_RS10145	COG0196	riboflavin kinase activity
FYA53_RS10150	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FYA53_RS10155	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FYA53_RS10155	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FYA53_RS10170	COG0210	DNA helicase
FYA53_RS10175	COG4771	TonB-dependent receptor
FYA53_RS10180	COG0488	(ABC) transporter
FYA53_RS10185	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA53_RS10200	COG0436	Aminotransferase
FYA53_RS10230	COG1278	Cold shock
FYA53_RS10240	COG1278	Cold shock
FYA53_RS10255	COG0740	serine-type endopeptidase activity
FYA53_RS10265	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYA53_RS10270	COG0583	DNA-binding transcription factor activity
FYA53_RS10275	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS10290	COG1024	Enoyl-CoA hydratase
FYA53_RS10305	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS10310	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS10325	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FYA53_RS10335	COG3468	outer membrane autotransporter barrel domain protein
FYA53_RS10355	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYA53_RS10365	COG1104	cysteine desulfurase activity
FYA53_RS10370	COG0822	iron-sulfur transferase activity
FYA53_RS10375	COG0316	Belongs to the HesB IscA family
FYA53_RS10390	COG0633	Ferredoxin
FYA53_RS10405	COG1024	Enoyl-CoA hydratase
FYA53_RS10435	COG1022	Amp-dependent synthetase and ligase
FYA53_RS10455	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS10465	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FYA53_RS10480	COG1136	(ABC) transporter
FYA53_RS10485	COG0084	hydrolase, TatD family'
FYA53_RS10500	COG4221	oxidoreductase activity
FYA53_RS10505	COG0406	alpha-ribazole phosphatase activity
FYA53_RS10515	COG3842	ATPase activity
FYA53_RS10530	COG2233	PERMEase
FYA53_RS10535	COG0840	transmembrane signaling receptor activity
FYA53_RS10540	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA53_RS10550	COG1534	Rna-binding protein
FYA53_RS10560	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYA53_RS10580	COG0248	Ppx GppA phosphatase
FYA53_RS10680	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA53_RS10710	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA53_RS10745	COG2072	flavoprotein involved in K transport
FYA53_RS10750	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS10780	COG1137	ATPase activity
FYA53_RS10790	COG0154	amidase activity
FYA53_RS10795	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS10815	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA53_RS10820	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA53_RS10825	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA53_RS10835	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA53_RS10845	COG1522	sequence-specific DNA binding
FYA53_RS10850	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA53_RS10855	COG1473	amidohydrolase
FYA53_RS10860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS10865	COG4597	amino acid ABC transporter
FYA53_RS10870	COG0765	amino acid transport
FYA53_RS10875	COG1126	abc transporter atp-binding protein
FYA53_RS10890	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA53_RS10920	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS10940	COG0583	DNA-binding transcription factor activity
FYA53_RS10975	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA53_RS11015	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FYA53_RS11025	COG1132	(ABC) transporter
FYA53_RS11050	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FYA53_RS11060	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS11070	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FYA53_RS11080	COG0511	ligase activity, forming carbon-carbon bonds
FYA53_RS11105	COG2188	Transcriptional regulator
FYA53_RS11110	COG0439	Biotin carboxylase
FYA53_RS11120	COG0511	ligase activity, forming carbon-carbon bonds
FYA53_RS11135	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA53_RS11165	COG3971	2-oxopent-4-enoate hydratase activity
FYA53_RS11170	COG0583	DNA-binding transcription factor activity
FYA53_RS11185	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA53_RS11235	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS11275	COG0251	oxidation-reduction process
FYA53_RS11375	COG4669	(LipO)protein
FYA53_RS11415	COG4794	Type iii secretion
FYA53_RS11420	COG4791	protein targeting
FYA53_RS11425	COG4792	protein secretion
FYA53_RS11465	COG2208	phosphoserine phosphatase activity
FYA53_RS11465	COG2770	Histidine kinase
FYA53_RS11475	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA53_RS11485	COG1366	Belongs to the anti-sigma-factor antagonist family
FYA53_RS11490	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA53_RS11530	COG2321	neutral zinc metallopeptidase
FYA53_RS11535	COG0009	L-threonylcarbamoyladenylate synthase
FYA53_RS11540	COG1994	Peptidase M50
FYA53_RS11545	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA53_RS11550	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FYA53_RS11555	COG3539	Fimbrial protein
FYA53_RS11565	COG2850	peptidyl-arginine hydroxylation
FYA53_RS11575	COG3360	Dodecin
FYA53_RS11610	COG0668	transmembrane transport
FYA53_RS11630	COG0483	inositol monophosphate 1-phosphatase activity
FYA53_RS11635	COG1253	flavin adenine dinucleotide binding
FYA53_RS11655	COG3063	Type IV pilus biogenesis stability protein PilW
FYA53_RS11670	COG0825	malonyl-CoA metabolic process
FYA53_RS11680	COG0527	aspartate kinase activity
FYA53_RS11705	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA53_RS11705	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA53_RS11720	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA53_RS11730	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS11740	COG0583	DNA-binding transcription factor activity
FYA53_RS11765	COG3842	ATPase activity
FYA53_RS11775	COG1902	pentaerythritol trinitrate reductase activity
FYA53_RS11775	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYA53_RS11780	COG1414	Transcriptional regulator
FYA53_RS11785	COG1832	CoA-binding protein
FYA53_RS11795	COG0251	oxidation-reduction process
FYA53_RS11820	COG1902	pentaerythritol trinitrate reductase activity
FYA53_RS11830	COG1215	transferase activity, transferring glycosyl groups
FYA53_RS11835	COG1649	PFAM Uncharacterised BCR, COG1649
FYA53_RS11835	COG0726	polysaccharide deacetylase
FYA53_RS11855	COG1846	Transcriptional regulator
FYA53_RS11885	COG2080	2 iron, 2 sulfur cluster binding
FYA53_RS11890	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA53_RS11900	COG0596	Alpha beta hydrolase
FYA53_RS11905	COG2309	aminopeptidase activity
FYA53_RS11910	COG1335	isochorismatase
FYA53_RS11915	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA53_RS11915	COG2010	Cytochrome c
FYA53_RS11920	COG1017	nitric oxide dioxygenase activity
FYA53_RS11920	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA53_RS11935	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS11945	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS11955	COG0183	Belongs to the thiolase family
FYA53_RS11960	COG1024	Enoyl-CoA hydratase
FYA53_RS11960	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS11975	COG0183	Belongs to the thiolase family
FYA53_RS11990	COG2197	response regulator
FYA53_RS12005	COG0166	Belongs to the GPI family
FYA53_RS12010	COG1045	serine acetyltransferase
FYA53_RS12035	COG0483	inositol monophosphate 1-phosphatase activity
FYA53_RS12045	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA53_RS12065	COG0598	Magnesium transport protein CorA
FYA53_RS12075	COG0747	negative chemotaxis
FYA53_RS12080	COG0601	transmembrane transport
FYA53_RS12085	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS12090	COG4172	Belongs to the ABC transporter superfamily
FYA53_RS12140	COG4964	Belongs to the GSP D family
FYA53_RS12205	COG3474	cytochrome
FYA53_RS12210	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FYA53_RS12225	COG3384	dioxygenase
FYA53_RS12230	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA53_RS12250	COG2885	chlorophyll binding
FYA53_RS12285	COG0697	spore germination
FYA53_RS12290	COG0730	response to heat
FYA53_RS12305	COG3264	Mechanosensitive ion channel
FYA53_RS12305	COG1511	domain protein
FYA53_RS12310	COG0583	DNA-binding transcription factor activity
FYA53_RS12315	COG0427	acetyl-CoA hydrolase
FYA53_RS12320	COG0385	Bile acid
FYA53_RS12360	COG3468	outer membrane autotransporter barrel domain protein
FYA53_RS12375	COG0799	negative regulation of ribosome biogenesis
FYA53_RS12390	COG0151	Belongs to the GarS family
FYA53_RS12400	COG0433	COG0433 Predicted ATPase
FYA53_RS12405	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA53_RS12415	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS12440	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA53_RS12450	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS12460	COG0747	negative chemotaxis
FYA53_RS12470	COG0473	3-isopropylmalate dehydrogenase activity
FYA53_RS12490	COG1846	Transcriptional regulator
FYA53_RS12500	COG0697	spore germination
FYA53_RS12510	COG0501	Belongs to the peptidase M48B family
FYA53_RS12530	COG0583	DNA-binding transcription factor activity
FYA53_RS12535	COG3842	ATPase activity
FYA53_RS12540	COG1178	ABC-type Fe3 transport system permease component
FYA53_RS12545	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA53_RS12550	COG1840	ABC-type Fe3 transport system, periplasmic component
FYA53_RS12585	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS12595	COG1722	exodeoxyribonuclease VII activity
FYA53_RS12600	COG0142	geranyltranstransferase activity
FYA53_RS12610	COG1469	GTP cyclohydrolase I activity
FYA53_RS12615	COG0360	Binds together with S18 to 16S ribosomal RNA
FYA53_RS12620	COG2965	DNA replication, synthesis of RNA primer
FYA53_RS12625	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FYA53_RS12645	COG0305	Participates in initiation and elongation during chromosome replication
FYA53_RS12655	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FYA53_RS12660	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FYA53_RS12665	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FYA53_RS12670	COG3737	Protein of unknown function (DUF498/DUF598)
FYA53_RS12675	COG0436	Aminotransferase
FYA53_RS12695	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FYA53_RS12700	COG0308	aminopeptidase N
FYA53_RS12720	COG0312	modulator of DNA gyrase
FYA53_RS12725	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA53_RS12730	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA53_RS12730	COG3210	domain, Protein
FYA53_RS12730	COG3210	domain, Protein
FYA53_RS12730	COG3064	Membrane
FYA53_RS12730	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA53_RS12730	COG3064	Membrane
FYA53_RS12735	COG0277	FAD linked oxidase domain protein
FYA53_RS12740	COG0277	FAD linked oxidase domain protein
FYA53_RS12750	COG0247	lactate metabolic process
FYA53_RS12755	COG2819	hydrolase of the alpha beta superfamily
FYA53_RS12795	COG0583	DNA-binding transcription factor activity
FYA53_RS12805	COG0730	response to heat
FYA53_RS12810	COG0625	glutathione transferase activity
FYA53_RS12815	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FYA53_RS12820	COG3909	cytochrome
FYA53_RS12855	COG3706	GGDEF domain
FYA53_RS12895	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
FYA53_RS12905	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA53_RS12910	COG0069	glutamate synthase activity
FYA53_RS12920	COG0679	Auxin Efflux Carrier
FYA53_RS12945	COG0557	exoribonuclease II activity
FYA53_RS12950	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA53_RS12960	COG3128	pkhd-type hydroxylase
FYA53_RS12965	COG0776	regulation of translation
FYA53_RS12995	COG0642	Histidine kinase
FYA53_RS13000	COG3158	transport of potassium into the cell
FYA53_RS13010	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA53_RS13025	COG0583	DNA-binding transcription factor activity
FYA53_RS13035	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYA53_RS13055	COG2186	Transcriptional regulator
FYA53_RS13060	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA53_RS13080	COG0268	Binds directly to 16S ribosomal RNA
FYA53_RS13090	COG0728	peptidoglycan biosynthetic process
FYA53_RS13110	COG2835	tetraacyldisaccharide 4'-kinase activity
FYA53_RS13120	COG0848	biopolymer transport protein
FYA53_RS13125	COG0811	peptide transport
FYA53_RS13135	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA53_RS13140	COG0038	chloride channel
FYA53_RS13145	COG0183	Belongs to the thiolase family
FYA53_RS13155	COG1278	Cold shock
FYA53_RS13170	COG4953	penicillin-binding protein 1C
FYA53_RS13175	COG0542	response to heat
FYA53_RS13180	COG2995	paraquat-inducible protein a
FYA53_RS13185	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA53_RS13185	COG3008	intermembrane lipid transfer
FYA53_RS13195	COG0506	proline dehydrogenase activity
FYA53_RS13195	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA53_RS13195	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA53_RS13230	COG1309	transcriptional regulator
FYA53_RS13245	COG0004	ammonium transporteR
FYA53_RS13265	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FYA53_RS13270	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FYA53_RS13310	COG0500	methyltransferase
FYA53_RS13325	COG2367	Beta-lactamase
FYA53_RS13335	COG1522	sequence-specific DNA binding
FYA53_RS13350	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA53_RS13385	COG0540	Belongs to the ATCase OTCase family
FYA53_RS13400	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS13405	COG0583	DNA-binding transcription factor activity
FYA53_RS13410	COG0183	Belongs to the thiolase family
FYA53_RS13425	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS13440	COG3842	ATPase activity
FYA53_RS13445	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS13445	COG1024	Enoyl-CoA hydratase
FYA53_RS13465	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FYA53_RS13470	COG2137	regulation of response to DNA damage stimulus
FYA53_RS13490	COG0045	succinate-CoA ligase (ADP-forming) activity
FYA53_RS13495	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA53_RS13500	COG0861	Integral membrane protein TerC family
FYA53_RS13505	COG0861	Integral membrane protein TerC family
FYA53_RS13550	COG2204	response regulator
FYA53_RS13555	COG2204	response regulator
FYA53_RS13560	COG0028	Belongs to the TPP enzyme family
FYA53_RS13615	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS13625	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FYA53_RS13630	COG4575	ribosome binding
FYA53_RS13650	COG1546	Belongs to the CinA family
FYA53_RS13650	COG1058	Belongs to the CinA family
FYA53_RS13665	COG0392	lysyltransferase activity
FYA53_RS13675	COG3568	Endonuclease Exonuclease Phosphatase
FYA53_RS13685	COG1695	Transcriptional regulator
FYA53_RS13705	COG0583	DNA-binding transcription factor activity
FYA53_RS13735	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS13740	COG4948	Mandelate Racemase Muconate Lactonizing
FYA53_RS13770	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA53_RS13805	COG3005	denitrification pathway
FYA53_RS13810	COG3043	anaerobic respiration
FYA53_RS13830	COG0330	HflC and HflK could
FYA53_RS13855	COG0583	DNA-binding transcription factor activity
FYA53_RS13860	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS13890	COG0431	NADPH-dependent FMN reductase
FYA53_RS13915	COG0824	Thioesterase
FYA53_RS13920	COG1454	alcohol dehydrogenase
FYA53_RS13930	COG1024	Enoyl-CoA hydratase
FYA53_RS13930	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS13935	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS13945	COG1024	Enoyl-CoA hydratase
FYA53_RS13955	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS13960	COG0583	DNA-binding transcription factor activity
FYA53_RS13965	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS13980	COG0183	Belongs to the thiolase family
FYA53_RS13985	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS14000	COG3119	arylsulfatase activity
FYA53_RS14015	COG0625	glutathione transferase activity
FYA53_RS14020	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
FYA53_RS14025	COG2944	sequence-specific DNA binding
FYA53_RS14035	COG2197	response regulator
FYA53_RS14055	COG3119	arylsulfatase activity
FYA53_RS14095	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FYA53_RS14110	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS14115	COG0861	Integral membrane protein TerC family
FYA53_RS14140	COG2267	carboxylic ester hydrolase activity
FYA53_RS14145	COG1228	amidohydrolase
FYA53_RS14155	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA53_RS14165	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA53_RS14185	COG0583	DNA-binding transcription factor activity
FYA53_RS14190	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS14215	COG2188	Transcriptional regulator
FYA53_RS14225	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS14230	COG1414	Transcriptional regulator
FYA53_RS14245	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA53_RS14250	COG0395	ABC-type sugar transport system, permease component
FYA53_RS14265	COG0439	Biotin carboxylase
FYA53_RS14270	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FYA53_RS14275	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS14295	COG0833	amino acid
FYA53_RS14325	COG3829	transcription factor binding
FYA53_RS14335	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYA53_RS14355	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS14360	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS14380	COG0583	DNA-binding transcription factor activity
FYA53_RS14385	COG4692	amylo-alpha-1,6-glucosidase activity
FYA53_RS14395	COG0183	Belongs to the thiolase family
FYA53_RS14410	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS14415	COG0633	Ferredoxin
FYA53_RS14425	COG1024	Enoyl-CoA hydratase
FYA53_RS14435	COG4638	Rieske (2fe-2S)
FYA53_RS14440	COG0683	leucine binding
FYA53_RS14445	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA53_RS14505	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA53_RS14515	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FYA53_RS14520	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FYA53_RS14535	COG0330	HflC and HflK could
FYA53_RS14540	COG0330	HflC and HflK could
FYA53_RS14545	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FYA53_RS14550	COG1923	regulation of RNA biosynthetic process
FYA53_RS14560	COG1160	GTP binding
FYA53_RS14565	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA53_RS14570	COG2976	Protein conserved in bacteria
FYA53_RS14595	COG0105	UTP biosynthetic process
FYA53_RS14615	COG0642	Histidine kinase
FYA53_RS14625	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FYA53_RS14650	COG0425	Belongs to the sulfur carrier protein TusA family
FYA53_RS14705	COG4172	Belongs to the ABC transporter superfamily
FYA53_RS14710	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS14715	COG0601	transmembrane transport
FYA53_RS14720	COG0747	negative chemotaxis
FYA53_RS14745	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FYA53_RS14795	COG1640	4-alpha-glucanotransferase
FYA53_RS14840	COG0667	Aldo Keto reductase
FYA53_RS14855	COG2259	Doxx family
FYA53_RS14895	COG0386	Belongs to the glutathione peroxidase family
FYA53_RS14900	COG0625	glutathione transferase activity
FYA53_RS14915	COG0095	Lipoate-protein ligase
FYA53_RS14930	COG0688	phosphatidylethanolamine metabolic process
FYA53_RS14940	COG1464	Belongs to the NlpA lipoprotein family
FYA53_RS14955	COG2363	Small membrane protein
FYA53_RS14980	COG2133	pyrroloquinoline quinone binding
FYA53_RS14985	COG0625	glutathione transferase activity
FYA53_RS14990	COG1794	racemase activity, acting on amino acids and derivatives
FYA53_RS15010	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA53_RS15020	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FYA53_RS15030	COG1653	transport
FYA53_RS15035	COG1175	transmembrane transport
FYA53_RS15040	COG0395	ABC-type sugar transport system, permease component
FYA53_RS15060	COG0604	alcohol dehydrogenase
FYA53_RS15060	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS15060	COG3321	synthase
FYA53_RS15075	COG0300	oxidoreductase activity
FYA53_RS15095	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FYA53_RS15110	COG0438	transferase activity, transferring glycosyl groups
FYA53_RS15130	COG0463	Glycosyl transferase, family 2
FYA53_RS15145	COG0783	Belongs to the Dps family
FYA53_RS15160	COG0583	DNA-binding transcription factor activity
FYA53_RS15165	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FYA53_RS15175	COG3468	outer membrane autotransporter barrel domain protein
FYA53_RS15180	COG0656	L-ascorbic acid biosynthetic process
FYA53_RS15185	COG2814	Major facilitator Superfamily
FYA53_RS15190	COG0583	DNA-binding transcription factor activity
FYA53_RS15200	COG1840	ABC-type Fe3 transport system, periplasmic component
FYA53_RS15210	COG3842	ATPase activity
FYA53_RS15215	COG1741	Belongs to the pirin family
FYA53_RS15220	COG1741	Belongs to the pirin family
FYA53_RS15225	COG0583	DNA-binding transcription factor activity
FYA53_RS15230	COG2204	response regulator
FYA53_RS15240	COG0174	glutamine synthetase
FYA53_RS15245	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA53_RS15255	COG5002	protein histidine kinase activity
FYA53_RS15255	COG5001	Diguanylate cyclase
FYA53_RS15300	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYA53_RS15305	COG0791	NLP P60 protein
FYA53_RS15310	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS15315	COG2863	cytochrome
FYA53_RS15320	COG3258	Cytochrome c
FYA53_RS15325	COG0194	GDP metabolic process
FYA53_RS15330	COG1758	RNA polymerase activity
FYA53_RS15335	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYA53_RS15340	COG1126	abc transporter atp-binding protein
FYA53_RS15345	COG0765	amino acid transport
FYA53_RS15350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS15370	COG0583	DNA-binding transcription factor activity
FYA53_RS15395	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA53_RS15410	COG2831	hemolysin activation secretion protein
FYA53_RS15415	COG3539	Fimbrial protein
FYA53_RS15420	COG3188	usher protein
FYA53_RS15425	COG3121	Chaperone
FYA53_RS15435	COG3064	Membrane
FYA53_RS15435	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FYA53_RS15435	COG3210	domain, Protein
FYA53_RS15440	COG2197	response regulator
FYA53_RS15495	COG4181	ATPase activity
FYA53_RS15505	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA53_RS15510	COG0584	glycerophosphoryl diester phosphodiesterase
FYA53_RS15515	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FYA53_RS15525	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA53_RS15525	COG0678	peroxiredoxin activity
FYA53_RS15535	COG0789	Transcriptional regulator
FYA53_RS15575	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FYA53_RS15585	COG2252	PERMEase
FYA53_RS15590	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYA53_RS15595	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA53_RS15625	COG0488	(ABC) transporter
FYA53_RS15630	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA53_RS15640	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA53_RS15645	COG1024	Enoyl-CoA hydratase
FYA53_RS15650	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYA53_RS15655	COG0590	tRNA wobble adenosine to inosine editing
FYA53_RS15675	COG2212	antiporter activity
FYA53_RS15680	COG1863	multisubunit Na H antiporter MnhE subunit
FYA53_RS15685	COG0651	ATP synthesis coupled electron transport
FYA53_RS15690	COG1006	Multisubunit Na H antiporter MnhC subunit
FYA53_RS15695	COG2111	Na H antiporter
FYA53_RS15695	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYA53_RS15710	COG0420	3'-5' exonuclease activity
FYA53_RS15745	COG0395	ABC-type sugar transport system, permease component
FYA53_RS15755	COG3842	ATPase activity
FYA53_RS15785	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS15790	COG3976	FMN-binding domain protein
FYA53_RS15790	COG1053	succinate dehydrogenase
FYA53_RS15820	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA53_RS15850	COG0450	alkyl hydroperoxide reductase
FYA53_RS15855	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS15870	COG0123	including yeast histone deacetylase and acetoin utilization protein
FYA53_RS15875	COG2951	lytic endotransglycosylase activity
FYA53_RS15895	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FYA53_RS15900	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FYA53_RS15930	COG0287	Prephenate dehydrogenase
FYA53_RS15965	COG2814	Major facilitator Superfamily
FYA53_RS16035	COG0583	DNA-binding transcription factor activity
FYA53_RS16050	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA53_RS16075	COG1053	succinate dehydrogenase
FYA53_RS16080	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS16085	COG2079	MmgE PrpD family protein
FYA53_RS16095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS16120	COG0028	Belongs to the TPP enzyme family
FYA53_RS16120	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
FYA53_RS16125	COG0436	Aminotransferase
FYA53_RS16145	COG0778	Nitroreductase
FYA53_RS16150	COG2814	Major facilitator Superfamily
FYA53_RS16155	COG3706	GGDEF domain
FYA53_RS16160	COG0589	response to stress
FYA53_RS16170	COG2951	lytic endotransglycosylase activity
FYA53_RS16175	COG2833	Protein of unknown function (DUF455)
FYA53_RS16190	COG1132	(ABC) transporter
FYA53_RS16200	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYA53_RS16200	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYA53_RS16205	COG3237	CsbD-like
FYA53_RS16215	COG2823	Periplasmic or secreted lipoprotein
FYA53_RS16235	COG0672	)-iron permease
FYA53_RS16250	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
FYA53_RS16255	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS16260	COG3243	poly(R)-hydroxyalkanoic acid synthase
FYA53_RS16270	COG0564	pseudouridine synthase activity
FYA53_RS16280	COG1199	ATP-dependent helicase activity
FYA53_RS16285	COG2183	response to ionizing radiation
FYA53_RS16310	COG4774	siderophore transport
FYA53_RS16320	COG1595	DNA-templated transcription, initiation
FYA53_RS16325	COG2175	clavaminate synthase activity
FYA53_RS16335	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS16340	COG0583	DNA-binding transcription factor activity
FYA53_RS16345	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS16350	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FYA53_RS16355	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA53_RS16360	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA53_RS16365	COG0567	Dehydrogenase, E1 component
FYA53_RS16375	COG1522	sequence-specific DNA binding
FYA53_RS16385	COG0280	phosphate acetyltransferase
FYA53_RS16385	COG0281	malic enzyme
FYA53_RS16390	COG3539	Fimbrial protein
FYA53_RS16405	COG0372	Belongs to the citrate synthase family
FYA53_RS16410	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FYA53_RS16415	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYA53_RS16420	COG1053	succinate dehydrogenase
FYA53_RS16425	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FYA53_RS16430	COG2009	succinate dehydrogenase
FYA53_RS16435	COG2188	Transcriptional regulator
FYA53_RS16440	COG0039	L-malate dehydrogenase activity
FYA53_RS16460	COG2828	Protein conserved in bacteria
FYA53_RS16470	COG1981	membrane
FYA53_RS16495	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA53_RS16505	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FYA53_RS16540	COG0148	phosphopyruvate hydratase activity
FYA53_RS16550	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FYA53_RS16555	COG0504	CTP synthase activity
FYA53_RS16575	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS16585	COG0747	negative chemotaxis
FYA53_RS16590	COG4172	Belongs to the ABC transporter superfamily
FYA53_RS16595	COG1446	asparaginase
FYA53_RS16625	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FYA53_RS16640	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FYA53_RS16645	COG0697	spore germination
FYA53_RS16650	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA53_RS16660	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FYA53_RS16665	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA53_RS16670	COG0791	NLP P60 protein
FYA53_RS16680	COG0583	DNA-binding transcription factor activity
FYA53_RS16695	COG0583	DNA-binding transcription factor activity
FYA53_RS16720	COG0670	Belongs to the BI1 family
FYA53_RS16725	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS16735	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FYA53_RS16745	COG1381	Involved in DNA repair and RecF pathway recombination
FYA53_RS16750	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FYA53_RS16755	COG0571	ribonuclease III activity
FYA53_RS16760	COG0681	Belongs to the peptidase S26 family
FYA53_RS16770	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA53_RS16795	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA53_RS16800	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYA53_RS16825	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FYA53_RS16830	COG1399	metal-binding, possibly nucleic acid-binding protein
FYA53_RS16845	COG3023	N-Acetylmuramoyl-L-alanine amidase
FYA53_RS16855	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FYA53_RS16860	COG0546	phosphoglycolate phosphatase activity
FYA53_RS16870	COG1530	ribonuclease E activity
FYA53_RS16880	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FYA53_RS16885	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FYA53_RS16910	COG3228	Belongs to the MtfA family
FYA53_RS16920	COG0251	oxidation-reduction process
FYA53_RS16930	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FYA53_RS16945	COG2878	Part of a membrane complex involved in electron transport
FYA53_RS16950	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FYA53_RS16985	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA53_RS17010	COG1268	BioY protein
FYA53_RS17015	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FYA53_RS17020	COG1122	ATPase activity
FYA53_RS17025	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYA53_RS17035	COG0271	Belongs to the BolA IbaG family
FYA53_RS17040	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA53_RS17055	COG1196	nuclear chromosome segregation
FYA53_RS17060	COG0477	Major facilitator Superfamily
FYA53_RS17065	COG1573	uracil-dna glycosylase
FYA53_RS17070	COG1214	PFAM Peptidase M22, glycoprotease
FYA53_RS17085	COG0450	alkyl hydroperoxide reductase
FYA53_RS17090	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA53_RS17105	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FYA53_RS17115	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FYA53_RS17120	COG0560	Phosphoserine phosphatase
FYA53_RS17125	COG0583	DNA-binding transcription factor activity
FYA53_RS17130	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS17135	COG0028	Belongs to the TPP enzyme family
FYA53_RS17160	COG4774	siderophore transport
FYA53_RS17170	COG1007	ATP synthesis coupled electron transport
FYA53_RS17185	COG0713	ATP synthesis coupled electron transport
FYA53_RS17195	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA53_RS17200	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FYA53_RS17205	COG1034	ATP synthesis coupled electron transport
FYA53_RS17215	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FYA53_RS17230	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA53_RS17235	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA53_RS17240	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA53_RS17260	COG0671	phosphoesterase, PA-phosphatase related
FYA53_RS17270	COG1597	lipid kinase activity
FYA53_RS17275	COG0583	DNA-binding transcription factor activity
FYA53_RS17280	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FYA53_RS17285	COG1733	regulation of RNA biosynthetic process
FYA53_RS17290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA53_RS17310	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
FYA53_RS17330	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS17350	COG3608	succinylglutamate desuccinylase aspartoacylase
FYA53_RS17355	COG0626	cystathionine gamma-synthase activity
FYA53_RS17360	COG0583	DNA-binding transcription factor activity
FYA53_RS17370	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS17375	COG0165	Argininosuccinate lyase
FYA53_RS17390	COG3799	methylaspartate ammonia-lyase activity
FYA53_RS17400	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FYA53_RS17410	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYA53_RS17415	COG0149	triose-phosphate isomerase activity
FYA53_RS17435	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA53_RS17445	COG1185	polyribonucleotide nucleotidyltransferase activity
FYA53_RS17450	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FYA53_RS17465	COG1183	phosphatidylcholine synthase activity
FYA53_RS17475	COG0440	acetolactate synthase activity
FYA53_RS17480	COG0028	Belongs to the TPP enzyme family
FYA53_RS17485	COG1289	transmembrane transporter activity
FYA53_RS17495	COG3022	response to hydroperoxide
FYA53_RS17500	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS17515	COG3486	L-lysine 6-monooxygenase (NADPH) activity
FYA53_RS17545	COG2814	Major facilitator Superfamily
FYA53_RS17565	COG3706	GGDEF domain
FYA53_RS17605	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FYA53_RS17615	COG1674	ftsk spoiiie
FYA53_RS17620	COG0492	ferredoxin-NADP+ reductase activity
FYA53_RS17625	COG1193	negative regulation of DNA recombination
FYA53_RS17635	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYA53_RS17655	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FYA53_RS17660	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FYA53_RS17665	COG2205	protein histidine kinase activity
FYA53_RS17670	COG0745	RESPONSE REGULATOR receiver
FYA53_RS17705	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYA53_RS17725	COG0612	Peptidase, M16
FYA53_RS17745	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FYA53_RS17760	COG1420	regulation of RNA biosynthetic process
FYA53_RS17770	COG0497	DNA recombination
FYA53_RS17780	COG0735	belongs to the Fur family
FYA53_RS17785	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA53_RS17830	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FYA53_RS17830	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYA53_RS17835	COG4311	Sarcosine oxidase, delta subunit
FYA53_RS17840	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS17850	COG0583	DNA-binding transcription factor activity
FYA53_RS17870	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS17875	COG2030	dehydratase
FYA53_RS17885	COG1024	Enoyl-CoA hydratase
FYA53_RS17910	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA53_RS17920	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA53_RS17920	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA53_RS17935	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA53_RS17950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS17975	COG1280	lysine exporter protein (LysE YggA)
FYA53_RS18005	COG0583	DNA-binding transcription factor activity
FYA53_RS18045	COG1414	Transcriptional regulator
FYA53_RS18050	COG1546	Belongs to the CinA family
FYA53_RS18050	COG1058	Belongs to the CinA family
FYA53_RS18065	COG0513	Belongs to the DEAD box helicase family
FYA53_RS18095	COG0429	hydrolase of the alpha beta-hydrolase fold
FYA53_RS18100	COG4783	chaperone-mediated protein folding
FYA53_RS18115	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA53_RS18130	COG0006	proline dipeptidase activity
FYA53_RS18140	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA53_RS18185	COG0514	ATP-dependent DNA helicase (RecQ)
FYA53_RS18210	COG1271	oxidase subunit
FYA53_RS18225	COG2894	cell division
FYA53_RS18230	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FYA53_RS18245	COG0488	(ABC) transporter
FYA53_RS18270	COG4608	Belongs to the ABC transporter superfamily
FYA53_RS18275	COG0444	Belongs to the ABC transporter superfamily
FYA53_RS18280	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS18285	COG0601	transmembrane transport
FYA53_RS18295	COG1215	transferase activity, transferring glycosyl groups
FYA53_RS18310	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FYA53_RS18320	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA53_RS18335	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS18340	COG2188	Transcriptional regulator
FYA53_RS18345	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FYA53_RS18350	COG2814	Major facilitator Superfamily
FYA53_RS18360	COG0259	pyridoxamine-phosphate oxidase activity
FYA53_RS18365	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYA53_RS18380	COG0583	DNA-binding transcription factor activity
FYA53_RS18385	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS18395	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS18400	COG0405	Gamma-glutamyltransferase
FYA53_RS18410	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS18425	COG0802	atpase or kinase
FYA53_RS18430	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA53_RS18435	COG0586	Pfam SNARE associated Golgi protein
FYA53_RS18465	COG0617	tRNA 3'-terminal CCA addition
FYA53_RS18490	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA53_RS18495	COG2188	Transcriptional regulator
FYA53_RS18505	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA53_RS18510	COG1234	tRNA 3'-trailer cleavage
FYA53_RS18515	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS18525	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS18530	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS18535	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA53_RS18540	COG2301	Belongs to the HpcH HpaI aldolase family
FYA53_RS18545	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS18550	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FYA53_RS18560	COG1024	Enoyl-CoA hydratase
FYA53_RS18570	COG2188	Transcriptional regulator
FYA53_RS18575	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FYA53_RS18580	COG0066	3-isopropylmalate dehydratase activity
FYA53_RS18595	COG0752	glycyl-tRNA synthetase alpha subunit
FYA53_RS18600	COG0751	glycine-tRNA ligase activity
FYA53_RS18605	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYA53_RS18610	COG0204	Acyl-transferase
FYA53_RS18625	COG0242	peptide deformylase activity
FYA53_RS18630	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS18635	COG0700	Nucleoside recognition
FYA53_RS18640	COG0469	pyruvate kinase activity
FYA53_RS18670	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FYA53_RS18680	COG2154	pterin-4-alpha-carbinolamine dehydratase
FYA53_RS18700	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA53_RS18705	COG0154	amidase activity
FYA53_RS18715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS18725	COG0747	negative chemotaxis
FYA53_RS18740	COG0019	diaminopimelate decarboxylase activity
FYA53_RS18755	COG3712	iron ion homeostasis
FYA53_RS18760	COG4774	siderophore transport
FYA53_RS18765	COG2353	YceI-like domain
FYA53_RS18770	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA53_RS18785	COG0583	DNA-binding transcription factor activity
FYA53_RS18805	COG3384	dioxygenase
FYA53_RS18810	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA53_RS18845	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS18850	COG1309	transcriptional regulator
FYA53_RS18855	COG2982	Protein involved in outer membrane biogenesis
FYA53_RS18860	COG2818	Glycosylase
FYA53_RS18880	COG1653	transport
FYA53_RS18885	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA53_RS18890	COG3842	ATPase activity
FYA53_RS18895	COG0395	ABC-type sugar transport system, permease component
FYA53_RS18920	COG2186	Transcriptional regulator
FYA53_RS18940	COG1454	alcohol dehydrogenase
FYA53_RS18955	COG2011	ABC-type metal ion transport system permease component
FYA53_RS18960	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FYA53_RS18965	COG1501	Belongs to the glycosyl hydrolase 31 family
FYA53_RS18980	COG0318	PFAM AMP-dependent synthetase and ligase
FYA53_RS18985	COG1473	amidohydrolase
FYA53_RS18995	COG2855	membrane
FYA53_RS19005	COG2239	Acts as a magnesium transporter
FYA53_RS19020	COG1522	sequence-specific DNA binding
FYA53_RS19025	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS19030	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS19055	COG0739	heme binding
FYA53_RS19065	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FYA53_RS19070	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FYA53_RS19080	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FYA53_RS19110	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYA53_RS19115	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYA53_RS19125	COG3116	cell division
FYA53_RS19130	COG0275	rRNA processing
FYA53_RS19135	COG2001	Belongs to the MraZ family
FYA53_RS19145	COG0488	(ABC) transporter
FYA53_RS19150	COG0418	dihydroorotase activity
FYA53_RS19155	COG1473	amidohydrolase
FYA53_RS19205	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FYA53_RS19210	COG4654	Cytochrome c, class I
FYA53_RS19265	COG2084	Dehydrogenase
FYA53_RS19310	COG0824	Thioesterase
FYA53_RS19315	COG0811	peptide transport
FYA53_RS19320	COG0848	biopolymer transport protein
FYA53_RS19345	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA53_RS19350	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FYA53_RS19355	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS19370	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA53_RS19395	COG0183	Belongs to the thiolase family
FYA53_RS19405	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS19410	COG0583	DNA-binding transcription factor activity
FYA53_RS19415	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS19420	COG1024	Enoyl-CoA hydratase
FYA53_RS19430	COG1253	flavin adenine dinucleotide binding
FYA53_RS19435	COG1285	pathogenesis
FYA53_RS19460	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA53_RS19465	COG0697	spore germination
FYA53_RS19475	COG1073	alpha beta
FYA53_RS19500	COG0463	Glycosyl transferase, family 2
FYA53_RS19510	COG0786	glutamate:sodium symporter activity
FYA53_RS19520	COG2031	fatty acid transporter
FYA53_RS19535	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA53_RS19540	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA53_RS19550	COG0328	RNA-DNA hybrid ribonuclease activity
FYA53_RS19555	COG2226	methyltransferase
FYA53_RS19560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYA53_RS19565	COG0741	lytic transglycosylase activity
FYA53_RS19565	COG1388	LysM domain
FYA53_RS19580	COG2979	Protein of unknown function (DUF533)
FYA53_RS19600	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS19615	COG3119	arylsulfatase activity
FYA53_RS19640	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FYA53_RS19660	COG0832	Belongs to the urease beta subunit family
FYA53_RS19670	COG0831	urea catabolic process
FYA53_RS19675	COG0829	nickel cation binding
FYA53_RS19690	COG0633	Ferredoxin
FYA53_RS19705	COG2188	Transcriptional regulator
FYA53_RS19710	COG3799	methylaspartate ammonia-lyase activity
FYA53_RS19730	COG2719	SpoVR family
FYA53_RS19735	COG2718	Belongs to the UPF0229 family
FYA53_RS19740	COG2766	serine protein kinase
FYA53_RS19745	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA53_RS19745	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA53_RS19755	COG4977	sequence-specific DNA binding
FYA53_RS19760	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FYA53_RS19790	COG0316	Belongs to the HesB IscA family
FYA53_RS19810	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FYA53_RS19815	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FYA53_RS19820	COG0312	modulator of DNA gyrase
FYA53_RS19840	COG1116	anion transmembrane transporter activity
FYA53_RS19845	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS19850	COG1335	isochorismatase
FYA53_RS19855	COG0346	lactoylglutathione lyase activity
FYA53_RS19860	COG0513	Belongs to the DEAD box helicase family
FYA53_RS19870	COG1802	Transcriptional regulator
FYA53_RS19875	COG0045	succinate-CoA ligase (ADP-forming) activity
FYA53_RS19875	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA53_RS19875	COG1042	CoA-binding domain protein
FYA53_RS19895	COG1522	sequence-specific DNA binding
FYA53_RS19925	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYA53_RS19930	COG1696	Membrane protein involved in D-alanine export
FYA53_RS19955	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA53_RS19970	COG0439	Biotin carboxylase
FYA53_RS19975	COG0511	ligase activity, forming carbon-carbon bonds
FYA53_RS19980	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FYA53_RS19985	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA53_RS19990	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYA53_RS19995	COG3150	esterase
FYA53_RS20000	COG0557	exoribonuclease II activity
FYA53_RS20015	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYA53_RS20050	COG1678	Uncharacterized ACR, COG1678
FYA53_RS20065	COG0352	thiamine-phosphate diphosphorylase activity
FYA53_RS20095	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS20105	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS20165	COG0494	nUDIX hydrolase
FYA53_RS20190	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FYA53_RS20215	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FYA53_RS20220	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FYA53_RS20250	COG1126	abc transporter atp-binding protein
FYA53_RS20255	COG0765	amino acid transport
FYA53_RS20260	COG4597	amino acid ABC transporter
FYA53_RS20265	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS20270	COG2884	Cell division ATP-binding protein ftsE
FYA53_RS20275	COG2177	Part of the ABC transporter FtsEX involved in
FYA53_RS20290	COG1194	a g-specific adenine glycosylase
FYA53_RS20310	COG4206	TonB-dependent receptor
FYA53_RS20315	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA53_RS20325	COG0351	phosphomethylpyrimidine kinase
FYA53_RS20330	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FYA53_RS20340	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FYA53_RS20350	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FYA53_RS20365	COG2226	methyltransferase
FYA53_RS20370	COG0745	RESPONSE REGULATOR receiver
FYA53_RS20375	COG5002	protein histidine kinase activity
FYA53_RS20385	COG5002	protein histidine kinase activity
FYA53_RS20395	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA53_RS20400	COG0583	DNA-binding transcription factor activity
FYA53_RS20410	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FYA53_RS20415	COG1984	allophanate hydrolase subunit 2
FYA53_RS20430	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS20440	COG1024	Enoyl-CoA hydratase
FYA53_RS20455	COG1802	Transcriptional regulator
FYA53_RS20465	COG1238	metal cluster binding
FYA53_RS20470	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA53_RS20475	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA53_RS20495	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FYA53_RS20500	COG4988	ABC transporter
FYA53_RS20510	COG1294	oxidase, subunit
FYA53_RS20535	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FYA53_RS20550	COG1137	ATPase activity
FYA53_RS20555	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYA53_RS20570	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA53_RS20570	COG2010	Cytochrome c
FYA53_RS20580	COG1660	Displays ATPase and GTPase activities
FYA53_RS20590	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA53_RS20605	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FYA53_RS20610	COG2823	Periplasmic or secreted lipoprotein
FYA53_RS20640	COG0471	metal ion transport
FYA53_RS20645	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA53_RS20650	COG0772	Belongs to the SEDS family
FYA53_RS20655	COG0768	penicillin binding
FYA53_RS20665	COG1792	Involved in formation and maintenance of cell shape
FYA53_RS20670	COG1077	Cell shape determining protein MreB Mrl
FYA53_RS20695	COG0708	Exodeoxyribonuclease III
FYA53_RS20705	COG2860	membrane
FYA53_RS20715	COG0583	DNA-binding transcription factor activity
FYA53_RS20720	COG0473	3-isopropylmalate dehydrogenase activity
FYA53_RS20745	COG0583	DNA-binding transcription factor activity
FYA53_RS20750	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FYA53_RS20755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA53_RS20760	COG0765	amino acid transport
FYA53_RS20765	COG0765	amino acid transport
FYA53_RS20770	COG1126	abc transporter atp-binding protein
FYA53_RS20775	COG1794	racemase activity, acting on amino acids and derivatives
FYA53_RS20780	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA53_RS20785	COG2223	nitrite transmembrane transporter activity
FYA53_RS20790	COG2813	Specifically methylates the guanine in position
FYA53_RS20790	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FYA53_RS20800	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA53_RS20845	COG0583	DNA-binding transcription factor activity
FYA53_RS20850	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FYA53_RS20855	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA53_RS20890	COG0154	amidase activity
FYA53_RS20900	COG1414	Transcriptional regulator
FYA53_RS20910	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA53_RS20910	COG1024	Enoyl-CoA hydratase
FYA53_RS20920	COG2132	Multicopper oxidase
FYA53_RS20965	COG1024	Enoyl-CoA hydratase
FYA53_RS20970	COG1024	Enoyl-CoA hydratase
FYA53_RS20975	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FYA53_RS20985	COG0747	negative chemotaxis
FYA53_RS20995	COG0601	transmembrane transport
FYA53_RS21000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS21005	COG0444	Belongs to the ABC transporter superfamily
FYA53_RS21010	COG4608	Belongs to the ABC transporter superfamily
FYA53_RS21020	COG2195	Cleaves the N-terminal amino acid of tripeptides
FYA53_RS21025	COG0210	DNA helicase
FYA53_RS21030	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FYA53_RS21045	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FYA53_RS21065	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FYA53_RS21080	COG0356	it plays a direct role in the translocation of protons across the membrane
FYA53_RS21095	COG1024	Enoyl-CoA hydratase
FYA53_RS21120	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA53_RS21130	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA53_RS21135	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FYA53_RS21140	COG2967	ApaG domain
FYA53_RS21145	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYA53_RS21150	COG0546	phosphoglycolate phosphatase activity
FYA53_RS21160	COG0512	Glutamine amidotransferase of anthranilate synthase
FYA53_RS21175	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS21195	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYA53_RS21205	COG1607	acyl-coa hydrolase
FYA53_RS21260	COG1802	Transcriptional regulator
FYA53_RS21290	COG1595	DNA-templated transcription, initiation
FYA53_RS21305	COG3720	iron ion transport
FYA53_RS21310	COG4558	Periplasmic binding protein
FYA53_RS21315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA53_RS21325	COG1683	Conserved Protein
FYA53_RS21355	COG3064	Membrane
FYA53_RS21360	COG0583	DNA-binding transcription factor activity
FYA53_RS21370	COG1234	tRNA 3'-trailer cleavage
FYA53_RS21380	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FYA53_RS21385	COG1802	Transcriptional regulator
FYA53_RS21395	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA53_RS21415	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS21435	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS21440	COG0583	DNA-binding transcription factor activity
FYA53_RS21450	COG1522	sequence-specific DNA binding
FYA53_RS21455	COG0183	Belongs to the thiolase family
FYA53_RS21515	COG2814	Major facilitator Superfamily
FYA53_RS21540	COG1999	signal sequence binding
FYA53_RS21585	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA53_RS21605	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FYA53_RS21615	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA53_RS21625	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FYA53_RS21630	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FYA53_RS21640	COG0067	glutamate synthase
FYA53_RS21640	COG0069	glutamate synthase activity
FYA53_RS21640	COG0070	glutamate synthase
FYA53_RS21650	COG3047	cAMP biosynthetic process
FYA53_RS21660	COG1127	ABC transporter
FYA53_RS21665	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYA53_RS21670	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA53_RS21675	COG2853	Lipoprotein
FYA53_RS21685	COG1131	(ABC) transporter
FYA53_RS21690	COG0842	Transport permease protein
FYA53_RS21710	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FYA53_RS21720	COG0131	Imidazoleglycerol-phosphate dehydratase
FYA53_RS21730	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FYA53_RS21745	COG0140	phosphoribosyl-ATP diphosphatase activity
FYA53_RS21750	COG0537	adenosine 5'-monophosphoramidase activity
FYA53_RS21755	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA53_RS21780	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FYA53_RS21790	COG0723	plastoquinol--plastocyanin reductase activity
FYA53_RS21795	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FYA53_RS21800	COG2857	Cytochrome c1
FYA53_RS21805	COG0625	glutathione transferase activity
FYA53_RS21810	COG2969	positive regulation of protein catabolic process
FYA53_RS21840	COG0583	DNA-binding transcription factor activity
FYA53_RS21845	COG0492	ferredoxin-NADP+ reductase activity
FYA53_RS21865	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS21875	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA53_RS21895	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS21930	COG3702	type iv secretory pathway
FYA53_RS21950	COG3736	Type IV secretory pathway, component VirB8
FYA53_RS21965	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
FYA53_RS21975	COG0697	spore germination
FYA53_RS21995	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FYA53_RS22000	COG0747	negative chemotaxis
FYA53_RS22005	COG0601	transmembrane transport
FYA53_RS22010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA53_RS22020	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FYA53_RS22030	COG0513	Belongs to the DEAD box helicase family
FYA53_RS22035	COG1280	lysine exporter protein (LysE YggA)
FYA53_RS22060	COG0583	DNA-binding transcription factor activity
FYA53_RS22070	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FYA53_RS22080	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FYA53_RS22085	COG0154	amidase activity
FYA53_RS22090	COG1609	Transcriptional regulator
FYA53_RS22110	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FYA53_RS22115	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FYA53_RS22120	COG3842	ATPase activity
FYA53_RS22125	COG1653	transport
FYA53_RS22130	COG1175	transmembrane transport
FYA53_RS22135	COG0395	ABC-type sugar transport system, permease component
FYA53_RS22170	COG1280	lysine exporter protein (LysE YggA)
FYA53_RS22185	COG1960	acyl-CoA dehydrogenase activity
FYA53_RS22195	COG0183	Belongs to the thiolase family
FYA53_RS22200	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FYA53_RS22220	COG3181	Tripartite tricarboxylate transporter family receptor
FYA53_RS22230	COG2358	TRAP transporter, solute receptor (TAXI family
FYA53_RS22245	COG2922	Belongs to the Smg family
FYA53_RS22270	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA53_RS22275	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS22280	COG1028	Short-chain dehydrogenase reductase Sdr
FYA53_RS22285	COG1012	belongs to the aldehyde dehydrogenase family
FYA53_RS22295	COG0028	Belongs to the TPP enzyme family
FYA53_RS22300	COG1522	sequence-specific DNA binding
FYA53_RS22305	COG3781	membrane
FYA53_RS22335	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FYA53_RS22360	COG1304	FMN binding
FYA53_RS22380	COG1414	Transcriptional regulator
FYA53_RS22395	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FYA53_RS22400	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FYA53_RS22405	COG0594	ribonuclease P activity
FYA53_RS22410	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FYA53_RS22420	COG0753	catalase activity
FYA53_RS22425	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA53_RS22430	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA53_RS22440	COG2175	clavaminate synthase activity
FYA53_RS22445	COG1473	amidohydrolase
FYA53_RS22450	COG4608	Belongs to the ABC transporter superfamily
FYA53_RS22455	COG0444	Belongs to the ABC transporter superfamily
FYA53_RS22465	COG0601	transmembrane transport
FYA53_RS22470	COG0747	negative chemotaxis
FYA53_RS22510	COG0436	Aminotransferase
FYA53_RS22515	COG1278	Cold shock