locus-tag class description RD15_RS00005 PF13932 GidA associated domain RD15_RS00005 PF01134 Glucose inhibited division protein A RD15_RS00010 PF02527 rRNA small subunit methyltransferase G RD15_RS00015 PF13614 AAA domain RD15_RS00025 PF02195 ParB-like nuclease domain RD15_RS00025 PF17762 HTH domain found in ParB protein RD15_RS00030 PF00710 Asparaginase, N-terminal RD15_RS00030 PF17763 Glutaminase/Asparaginase C-terminal domain RD15_RS00035 PF00710 Asparaginase, N-terminal RD15_RS00035 PF17763 Glutaminase/Asparaginase C-terminal domain RD15_RS00055 PF03143 Elongation factor Tu C-terminal domain RD15_RS00055 PF03144 Elongation factor Tu domain 2 RD15_RS00055 PF00009 Elongation factor Tu GTP binding domain RD15_RS00065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RD15_RS00070 PF00467 KOW motif RD15_RS00070 PF02357 Transcription termination factor nusG RD15_RS00075 PF00298 Ribosomal protein L11, RNA binding domain RD15_RS00075 PF03946 Ribosomal protein L11, N-terminal domain RD15_RS00080 PF00687 Ribosomal protein L1p/L10e family RD15_RS00085 PF00466 Ribosomal protein L10 RD15_RS00090 PF16320 Ribosomal protein L7/L12 dimerisation domain RD15_RS00090 PF00542 Ribosomal protein L7/L12 C-terminal domain RD15_RS00095 PF04560 RNA polymerase Rpb2, domain 7 RD15_RS00095 PF00562 RNA polymerase Rpb2, domain 6 RD15_RS00095 PF04563 RNA polymerase beta subunit RD15_RS00095 PF10385 RNA polymerase beta subunit external 1 domain RD15_RS00095 PF04565 RNA polymerase Rpb2, domain 3 RD15_RS00095 PF04561 RNA polymerase Rpb2, domain 2 RD15_RS00100 PF04997 RNA polymerase Rpb1, domain 1 RD15_RS00100 PF00623 RNA polymerase Rpb1, domain 2 RD15_RS00100 PF04983 RNA polymerase Rpb1, domain 3 RD15_RS00100 PF05000 RNA polymerase Rpb1, domain 4 RD15_RS00100 PF04998 RNA polymerase Rpb1, domain 5 RD15_RS00130 PF00486 Transcriptional regulatory protein, C terminal RD15_RS00130 PF00072 Response regulator receiver domain RD15_RS00140 PF02515 CoA-transferase family III RD15_RS00155 PF01575 MaoC like domain RD15_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS00160 PF03466 LysR substrate binding domain RD15_RS00165 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS00185 PF02091 Glycyl-tRNA synthetase alpha subunit RD15_RS00190 PF02092 Glycyl-tRNA synthetase beta subunit RD15_RS00190 PF05746 DALR anticodon binding domain RD15_RS00200 PF01553 Acyltransferase RD15_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD15_RS00215 PF01327 Polypeptide deformylase RD15_RS00230 PF00561 alpha/beta hydrolase fold RD15_RS00250 PF02615 Malate/L-lactate dehydrogenase RD15_RS00255 PF00561 alpha/beta hydrolase fold RD15_RS00260 PF00561 alpha/beta hydrolase fold RD15_RS00260 PF07021 Methionine biosynthesis protein MetW RD15_RS00270 PF07690 Major Facilitator Superfamily RD15_RS00280 PF01177 Asp/Glu/Hydantoin racemase RD15_RS00285 PF00005 ABC transporter RD15_RS00290 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS00300 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS00330 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS00345 PF00175 Oxidoreductase NAD-binding domain RD15_RS00345 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS00345 PF00970 Oxidoreductase FAD-binding domain RD15_RS00350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS00360 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS00390 PF00183 Hsp90 protein RD15_RS00395 PF00043 Glutathione S-transferase, C-terminal domain RD15_RS00395 PF13417 Glutathione S-transferase, N-terminal domain RD15_RS00400 PF01510 N-acetylmuramoyl-L-alanine amidase RD15_RS00410 PF01578 Cytochrome C assembly protein RD15_RS00415 PF02881 SRP54-type protein, helical bundle domain RD15_RS00415 PF02978 Signal peptide binding domain RD15_RS00415 PF00448 SRP54-type protein, GTPase domain RD15_RS00430 PF02719 Polysaccharide biosynthesis protein RD15_RS00440 PF10997 Alternate to MurJ RD15_RS00445 PF00862 Sucrose synthase RD15_RS00445 PF00534 Glycosyl transferases group 1 RD15_RS00450 PF02397 Bacterial sugar transferase RD15_RS00455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD15_RS00465 PF02350 UDP-N-acetylglucosamine 2-epimerase RD15_RS00470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RD15_RS00475 PF00132 Bacterial transferase hexapeptide (six repeats) RD15_RS00480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RD15_RS00480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RD15_RS00485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD15_RS00490 PF00534 Glycosyl transferases group 1 RD15_RS00490 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RD15_RS00500 PF03309 Type III pantothenate kinase RD15_RS00510 PF02405 Permease MlaE RD15_RS00515 PF00005 ABC transporter RD15_RS00540 PF00768 D-alanyl-D-alanine carboxypeptidase RD15_RS00540 PF07943 Penicillin-binding protein 5, C-terminal domain RD15_RS00545 PF01063 Amino-transferase class IV RD15_RS00550 PF04359 Protein of unknown function (DUF493) RD15_RS00555 PF03099 Biotin/lipoate A/B protein ligase family RD15_RS00560 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RD15_RS00560 PF04055 Radical SAM superfamily RD15_RS00565 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RD15_RS00570 PF04321 RmlD substrate binding domain RD15_RS00575 PF16363 GDP-mannose 4,6 dehydratase RD15_RS00590 PF01053 Cys/Met metabolism PLP-dependent enzyme RD15_RS00595 PF01323 DSBA-like thioredoxin domain RD15_RS00595 PF00085 Thioredoxin RD15_RS00605 PF05746 DALR anticodon binding domain RD15_RS00605 PF00750 tRNA synthetases class I (R) RD15_RS00605 PF03485 Arginyl tRNA synthetase N terminal domain RD15_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS00635 PF13416 Bacterial extracellular solute-binding protein RD15_RS00640 PF17912 MalK OB fold domain RD15_RS00640 PF00005 ABC transporter RD15_RS00645 PF00149 Calcineurin-like phosphoesterase RD15_RS00660 PF00005 ABC transporter RD15_RS00660 PF12857 TOBE-like domain RD15_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS00680 PF00356 Bacterial regulatory proteins, lacI family RD15_RS00690 PF01425 Amidase RD15_RS00695 PF00682 HMGL-like RD15_RS00695 PF08502 LeuA allosteric (dimerisation) domain RD15_RS00705 PF00309 Sigma-54 factor, Activator interacting domain (AID) RD15_RS00705 PF04963 Sigma-54 factor, core binding domain RD15_RS00705 PF04552 Sigma-54, DNA binding domain RD15_RS00715 PF03466 LysR substrate binding domain RD15_RS00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS00730 PF13609 Gram-negative porin RD15_RS00735 PF00291 Pyridoxal-phosphate dependent enzyme RD15_RS00735 PF00585 C-terminal regulatory domain of Threonine dehydratase RD15_RS00750 PF07729 FCD domain RD15_RS00750 PF00392 Bacterial regulatory proteins, gntR family RD15_RS00755 PF02515 CoA-transferase family III RD15_RS00765 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS00770 PF01494 FAD binding domain RD15_RS00775 PF01494 FAD binding domain RD15_RS00780 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS00790 PF03746 LamB/YcsF family RD15_RS00795 PF02626 Carboxyltransferase domain, subdomain A and B RD15_RS00800 PF02682 Carboxyltransferase domain, subdomain C and D RD15_RS00810 PF03466 LysR substrate binding domain RD15_RS00810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS00815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD15_RS00815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD15_RS00815 PF01842 ACT domain RD15_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS00825 PF00672 HAMP domain RD15_RS00825 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS00830 PF00486 Transcriptional regulatory protein, C terminal RD15_RS00830 PF00072 Response regulator receiver domain RD15_RS00835 PF00989 PAS fold RD15_RS00835 PF11808 Phosphate regulon sensor protein PhoR RD15_RS00835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS00835 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS00840 PF00486 Transcriptional regulatory protein, C terminal RD15_RS00840 PF00072 Response regulator receiver domain RD15_RS00845 PF01209 ubiE/COQ5 methyltransferase family RD15_RS00860 PF03109 ABC1 family RD15_RS00875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS00875 PF00005 ABC transporter RD15_RS00880 PF04536 TPM domain RD15_RS00890 PF00271 Helicase conserved C-terminal domain RD15_RS00890 PF00270 DEAD/DEAH box helicase RD15_RS00895 PF01810 LysE type translocator RD15_RS00900 PF16658 Class II release factor RF3, C-terminal domain RD15_RS00900 PF03144 Elongation factor Tu domain 2 RD15_RS00900 PF00009 Elongation factor Tu GTP binding domain RD15_RS00910 PF00210 Ferritin-like domain RD15_RS00935 PF17773 UPF0176 acylphosphatase like domain RD15_RS00935 PF00581 Rhodanese-like domain RD15_RS00940 PF01588 Putative tRNA binding domain RD15_RS00940 PF09334 tRNA synthetases class I (M) RD15_RS00950 PF10609 NUBPL iron-transfer P-loop NTPase RD15_RS00965 PF00692 dUTPase RD15_RS00990 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RD15_RS00990 PF01276 Orn/Lys/Arg decarboxylase, major domain RD15_RS00990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RD15_RS01005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD15_RS01005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD15_RS01010 PF02535 ZIP Zinc transporter RD15_RS01015 PF01571 Aminomethyltransferase folate-binding domain RD15_RS01015 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD15_RS01020 PF01597 Glycine cleavage H-protein RD15_RS01025 PF02347 Glycine cleavage system P-protein RD15_RS01030 PF07729 FCD domain RD15_RS01030 PF00392 Bacterial regulatory proteins, gntR family RD15_RS01035 PF02515 CoA-transferase family III RD15_RS01045 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS01065 PF12146 Serine aminopeptidase, S33 RD15_RS01075 PF02426 Muconolactone delta-isomerase RD15_RS01080 PF01144 Coenzyme A transferase RD15_RS01085 PF01144 Coenzyme A transferase RD15_RS01090 PF09339 IclR helix-turn-helix domain RD15_RS01090 PF01614 Bacterial transcriptional regulator RD15_RS01100 PF02667 Short chain fatty acid transporter RD15_RS01105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD15_RS01105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD15_RS01110 PF03797 Autotransporter beta-domain RD15_RS01110 PF00082 Subtilase family RD15_RS01115 PF00311 Phosphoenolpyruvate carboxylase RD15_RS01120 PF06508 Queuosine biosynthesis protein QueC RD15_RS01145 PF01565 FAD binding domain RD15_RS01145 PF02913 FAD linked oxidases, C-terminal domain RD15_RS01150 PF00171 Aldehyde dehydrogenase family RD15_RS01155 PF01964 Radical SAM ThiC family RD15_RS01155 PF13667 ThiC-associated domain RD15_RS01160 PF07549 SecD/SecF GG Motif RD15_RS01160 PF02355 Protein export membrane protein RD15_RS01165 PF09518 HindIII restriction endonuclease RD15_RS01180 PF01494 FAD binding domain RD15_RS01185 PF00005 ABC transporter RD15_RS01190 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS01190 PF00005 ABC transporter RD15_RS01195 PF02653 Branched-chain amino acid transport system / permease component RD15_RS01195 PF11862 Domain of unknown function (DUF3382) RD15_RS01200 PF02653 Branched-chain amino acid transport system / permease component RD15_RS01210 PF07859 alpha/beta hydrolase fold RD15_RS01240 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) RD15_RS01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS01250 PF03466 LysR substrate binding domain RD15_RS01255 PF07690 Major Facilitator Superfamily RD15_RS01260 PF00920 Dehydratase family RD15_RS01265 PF12833 Helix-turn-helix domain RD15_RS01270 PF08502 LeuA allosteric (dimerisation) domain RD15_RS01270 PF00682 HMGL-like RD15_RS01280 PF07859 alpha/beta hydrolase fold RD15_RS01285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS01290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD15_RS01295 PF04299 Putative FMN-binding domain RD15_RS01305 PF13180 PDZ domain RD15_RS01310 PF01784 NIF3 (NGG1p interacting factor 3) RD15_RS01315 PF01741 Large-conductance mechanosensitive channel, MscL RD15_RS01320 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RD15_RS01320 PF00355 Rieske [2Fe-2S] domain RD15_RS01325 PF00033 Cytochrome b/b6/petB RD15_RS01325 PF00032 Cytochrome b(C-terminal)/b6/petD RD15_RS01330 PF02167 Cytochrome C1 family RD15_RS01335 PF02798 Glutathione S-transferase, N-terminal domain RD15_RS01335 PF00043 Glutathione S-transferase, C-terminal domain RD15_RS01365 PF13609 Gram-negative porin RD15_RS01380 PF00156 Phosphoribosyl transferase domain RD15_RS01385 PF00005 ABC transporter RD15_RS01385 PF00664 ABC transporter transmembrane region RD15_RS01390 PF00664 ABC transporter transmembrane region RD15_RS01390 PF00005 ABC transporter RD15_RS01395 PF08173 Membrane bound YbgT-like protein RD15_RS01400 PF02322 Cytochrome bd terminal oxidase subunit II RD15_RS01405 PF01654 Cytochrome bd terminal oxidase subunit I RD15_RS01425 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS01425 PF18158 Adaptive response protein AidB N-terminal domain RD15_RS01425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS01430 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS01435 PF02515 CoA-transferase family III RD15_RS01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS01445 PF03466 LysR substrate binding domain RD15_RS01450 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS01460 PF10415 Fumarase C C-terminus RD15_RS01460 PF00206 Lyase RD15_RS01465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RD15_RS01470 PF11741 AMIN domain RD15_RS01470 PF01520 N-acetylmuramoyl-L-alanine amidase RD15_RS01475 PF09335 SNARE associated Golgi protein RD15_RS01480 PF01119 DNA mismatch repair protein, C-terminal domain RD15_RS01480 PF08676 MutL C terminal dimerisation domain RD15_RS01490 PF02769 AIR synthase related protein, C-terminal domain RD15_RS01490 PF00586 AIR synthase related protein, N-terminal domain RD15_RS01495 PF00308 Bacterial dnaA protein RD15_RS01505 PF01743 Poly A polymerase head domain RD15_RS01505 PF12626 Polymerase A arginine-rich C-terminus RD15_RS01505 PF12627 Probable RNA and SrmB- binding site of polymerase A RD15_RS01510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RD15_RS01515 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS01525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS01530 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS01535 PF07702 UTRA domain RD15_RS01535 PF00392 Bacterial regulatory proteins, gntR family RD15_RS01540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD15_RS01540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD15_RS01545 PF02627 Carboxymuconolactone decarboxylase family RD15_RS01565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD15_RS01575 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS01580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS01580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS01580 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS01585 PF13193 AMP-binding enzyme C-terminal domain RD15_RS01585 PF00501 AMP-binding enzyme RD15_RS01605 PF00202 Aminotransferase class-III RD15_RS01610 PF02581 Thiamine monophosphate synthase RD15_RS01615 PF08543 Phosphomethylpyrimidine kinase RD15_RS01620 PF00301 Rubredoxin RD15_RS01625 PF02622 Uncharacterized ACR, COG1678 RD15_RS01630 PF03652 Holliday junction resolvase RD15_RS01635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD15_RS01635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD15_RS01640 PF01979 Amidohydrolase family RD15_RS01645 PF01553 Acyltransferase RD15_RS01650 PF00149 Calcineurin-like phosphoesterase RD15_RS01660 PF00912 Transglycosylase RD15_RS01675 PF00501 AMP-binding enzyme RD15_RS01675 PF13193 AMP-binding enzyme C-terminal domain RD15_RS01680 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS01695 PF12706 Beta-lactamase superfamily domain RD15_RS01700 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS01720 PF00563 EAL domain RD15_RS01720 PF00990 Diguanylate cyclase, GGDEF domain RD15_RS01720 PF03707 Bacterial signalling protein N terminal repeat RD15_RS01725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD15_RS01725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RD15_RS01730 PF13532 2OG-Fe(II) oxygenase superfamily RD15_RS01735 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA RD15_RS01740 PF04463 Protein of unknown function (DUF523) RD15_RS01745 PF00005 ABC transporter RD15_RS01750 PF01032 FecCD transport family RD15_RS01755 PF01497 Periplasmic binding protein RD15_RS01760 PF05171 Haemin-degrading HemS.ChuX domain RD15_RS01765 PF00593 TonB dependent receptor RD15_RS01765 PF04886 PT repeat RD15_RS01765 PF07715 TonB-dependent Receptor Plug Domain RD15_RS01770 PF16220 Domain of unknown function (DUF4880) RD15_RS01770 PF04773 FecR protein RD15_RS01775 PF04542 Sigma-70 region 2 RD15_RS01775 PF08281 Sigma-70, region 4 RD15_RS01800 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD15_RS01810 PF07729 FCD domain RD15_RS01810 PF00392 Bacterial regulatory proteins, gntR family RD15_RS01830 PF00171 Aldehyde dehydrogenase family RD15_RS01840 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS01840 PF00175 Oxidoreductase NAD-binding domain RD15_RS01840 PF00970 Oxidoreductase FAD-binding domain RD15_RS01865 PF03458 UPF0126 domain RD15_RS01870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD15_RS01870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD15_RS01875 PF03372 Endonuclease/Exonuclease/phosphatase family RD15_RS01880 PF00156 Phosphoribosyl transferase domain RD15_RS01885 PF02934 GatB/GatE catalytic domain RD15_RS01885 PF02637 GatB domain RD15_RS01890 PF01425 Amidase RD15_RS01895 PF02686 Glu-tRNAGln amidotransferase C subunit RD15_RS01905 PF04085 rod shape-determining protein MreC RD15_RS01915 PF00905 Penicillin binding protein transpeptidase domain RD15_RS01915 PF03717 Penicillin-binding Protein dimerisation domain RD15_RS01920 PF01098 Cell cycle protein RD15_RS01925 PF02615 Malate/L-lactate dehydrogenase RD15_RS01930 PF00939 Sodium:sulfate symporter transmembrane region RD15_RS01935 PF00440 Bacterial regulatory proteins, tetR family RD15_RS01945 PF00696 Amino acid kinase family RD15_RS01950 PF03180 NLPA lipoprotein RD15_RS01955 PF00578 AhpC/TSA family RD15_RS01960 PF04972 BON domain RD15_RS01965 PF13580 SIS domain RD15_RS01970 PF02021 Uncharacterised protein family UPF0102 RD15_RS01975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD15_RS01980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RD15_RS01980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RD15_RS02000 PF02515 CoA-transferase family III RD15_RS02005 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02010 PF02515 CoA-transferase family III RD15_RS02030 PF09339 IclR helix-turn-helix domain RD15_RS02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS02050 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD15_RS02055 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS02055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD15_RS02060 PF02515 CoA-transferase family III RD15_RS02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS02065 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS02070 PF03466 LysR substrate binding domain RD15_RS02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS02080 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02090 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02100 PF00892 EamA-like transporter family RD15_RS02105 PF01810 LysE type translocator RD15_RS02110 PF12146 Serine aminopeptidase, S33 RD15_RS02125 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RD15_RS02130 PF00535 Glycosyl transferase family 2 RD15_RS02145 PF03616 Sodium/glutamate symporter RD15_RS02155 PF02667 Short chain fatty acid transporter RD15_RS02170 PF00929 Exonuclease RD15_RS02175 PF00873 AcrB/AcrD/AcrF family RD15_RS02185 PF14492 Elongation Factor G, domain II RD15_RS02185 PF00009 Elongation factor Tu GTP binding domain RD15_RS02185 PF03764 Elongation factor G, domain IV RD15_RS02185 PF03144 Elongation factor Tu domain 2 RD15_RS02185 PF00679 Elongation factor G C-terminus RD15_RS02190 PF00582 Universal stress protein family RD15_RS02200 PF00155 Aminotransferase class I and II RD15_RS02200 PF00392 Bacterial regulatory proteins, gntR family RD15_RS02205 PF03144 Elongation factor Tu domain 2 RD15_RS02205 PF14492 Elongation Factor G, domain II RD15_RS02205 PF00679 Elongation factor G C-terminus RD15_RS02205 PF03764 Elongation factor G, domain IV RD15_RS02205 PF00009 Elongation factor Tu GTP binding domain RD15_RS02210 PF02308 MgtC family RD15_RS02215 PF03741 Integral membrane protein TerC family RD15_RS02215 PF03471 Transporter associated domain RD15_RS02220 PF02515 CoA-transferase family III RD15_RS02225 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS02230 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02235 PF03466 LysR substrate binding domain RD15_RS02235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS02240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS02240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS02240 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS02250 PF02803 Thiolase, C-terminal domain RD15_RS02250 PF00108 Thiolase, N-terminal domain RD15_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS02265 PF03466 LysR substrate binding domain RD15_RS02270 PF00313 'Cold-shock' DNA-binding domain RD15_RS02280 PF07729 FCD domain RD15_RS02280 PF00392 Bacterial regulatory proteins, gntR family RD15_RS02285 PF00171 Aldehyde dehydrogenase family RD15_RS02290 PF02667 Short chain fatty acid transporter RD15_RS02295 PF00970 Oxidoreductase FAD-binding domain RD15_RS02295 PF00042 Globin RD15_RS02295 PF00175 Oxidoreductase NAD-binding domain RD15_RS02300 PF01042 Endoribonuclease L-PSP RD15_RS02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS02305 PF03466 LysR substrate binding domain RD15_RS02325 PF02515 CoA-transferase family III RD15_RS02335 PF03466 LysR substrate binding domain RD15_RS02335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS02340 PF02515 CoA-transferase family III RD15_RS02350 PF01794 Ferric reductase like transmembrane component RD15_RS02355 PF00174 Oxidoreductase molybdopterin binding domain RD15_RS02360 PF13419 Haloacid dehalogenase-like hydrolase RD15_RS02365 PF00849 RNA pseudouridylate synthase RD15_RS02365 PF01479 S4 domain RD15_RS02370 PF12111 Polyribonucleotide phosphorylase C terminal RD15_RS02370 PF10150 Ribonuclease E/G family RD15_RS02370 PF00575 S1 RNA binding domain RD15_RS02395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD15_RS02405 PF01062 Bestrophin, RFP-TM, chloride channel RD15_RS02410 PF01037 Lrp/AsnC ligand binding domain RD15_RS02415 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS02415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS02415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS02425 PF00171 Aldehyde dehydrogenase family RD15_RS02435 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS02440 PF00005 ABC transporter RD15_RS02450 PF01131 DNA topoisomerase RD15_RS02450 PF01751 Toprim domain RD15_RS02465 PF04361 Protein of unknown function (DUF494) RD15_RS02470 PF00593 TonB dependent receptor RD15_RS02470 PF07715 TonB-dependent Receptor Plug Domain RD15_RS02480 PF16868 NMT1-like family RD15_RS02485 PF14031 Putative serine dehydratase domain RD15_RS02485 PF01168 Alanine racemase, N-terminal domain RD15_RS02490 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02495 PF00202 Aminotransferase class-III RD15_RS02505 PF00364 Biotin-requiring enzyme RD15_RS02505 PF00289 Biotin carboxylase, N-terminal domain RD15_RS02505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD15_RS02505 PF02785 Biotin carboxylase C-terminal domain RD15_RS02510 PF01039 Carboxyl transferase domain RD15_RS02515 PF00108 Thiolase, N-terminal domain RD15_RS02515 PF02803 Thiolase, C-terminal domain RD15_RS02525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS02525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS02525 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS02540 PF00376 MerR family regulatory protein RD15_RS02540 PF09278 MerR, DNA binding RD15_RS02545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS02545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS02545 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS02565 PF01070 FMN-dependent dehydrogenase RD15_RS02575 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02580 PF01425 Amidase RD15_RS02585 PF09339 IclR helix-turn-helix domain RD15_RS02585 PF01614 Bacterial transcriptional regulator RD15_RS02590 PF01751 Toprim domain RD15_RS02590 PF00204 DNA gyrase B RD15_RS02590 PF00986 DNA gyrase B subunit, carboxyl terminus RD15_RS02590 PF18053 DNA gyrase B subunit insert domain RD15_RS02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS02595 PF00712 DNA polymerase III beta subunit, N-terminal domain RD15_RS02595 PF02767 DNA polymerase III beta subunit, central domain RD15_RS02595 PF02768 DNA polymerase III beta subunit, C-terminal domain RD15_RS02600 PF00308 Bacterial dnaA protein RD15_RS02600 PF11638 DnaA N-terminal domain RD15_RS02600 PF08299 Bacterial dnaA protein helix-turn-helix RD15_RS02605 PF00468 Ribosomal protein L34 RD15_RS02610 PF00825 Ribonuclease P RD15_RS02615 PF01809 Putative membrane protein insertion efficiency factor RD15_RS02620 PF14849 YidC periplasmic domain RD15_RS02620 PF02096 60Kd inner membrane protein RD15_RS02630 PF02525 Flavodoxin-like fold RD15_RS02635 PF03466 LysR substrate binding domain RD15_RS02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS02650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS02650 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS02655 PF00589 Phage integrase family RD15_RS02690 PF03837 RecT family RD15_RS02735 PF01042 Endoribonuclease L-PSP RD15_RS02745 PF01145 SPFH domain / Band 7 family RD15_RS02750 PF07411 Domain of unknown function (DUF1508) RD15_RS02755 PF01168 Alanine racemase, N-terminal domain RD15_RS02755 PF14031 Putative serine dehydratase domain RD15_RS02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS02765 PF03466 LysR substrate binding domain RD15_RS02785 PF12951 Passenger-associated-transport-repeat RD15_RS02785 PF12951 Passenger-associated-transport-repeat RD15_RS02795 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02800 PF13193 AMP-binding enzyme C-terminal domain RD15_RS02800 PF00501 AMP-binding enzyme RD15_RS02805 PF01614 Bacterial transcriptional regulator RD15_RS02805 PF09339 IclR helix-turn-helix domain RD15_RS02810 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS02815 PF02627 Carboxymuconolactone decarboxylase family RD15_RS02820 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02830 PF00491 Arginase family RD15_RS02835 PF00202 Aminotransferase class-III RD15_RS02845 PF07729 FCD domain RD15_RS02845 PF00392 Bacterial regulatory proteins, gntR family RD15_RS02850 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02855 PF01266 FAD dependent oxidoreductase RD15_RS02860 PF01361 Tautomerase enzyme RD15_RS02865 PF00919 Uncharacterized protein family UPF0004 RD15_RS02865 PF04055 Radical SAM superfamily RD15_RS02865 PF18693 TRAM domain RD15_RS02875 PF03641 Possible lysine decarboxylase RD15_RS02885 PF13419 Haloacid dehalogenase-like hydrolase RD15_RS02895 PF00551 Formyl transferase RD15_RS02895 PF02911 Formyl transferase, C-terminal domain RD15_RS02900 PF01327 Polypeptide deformylase RD15_RS02905 PF00266 Aminotransferase class-V RD15_RS02910 PF01037 Lrp/AsnC ligand binding domain RD15_RS02915 PF02481 DNA recombination-mediator protein A RD15_RS02915 PF17782 DprA winged helix domain RD15_RS02920 PF00682 HMGL-like RD15_RS02930 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS02935 PF00155 Aminotransferase class I and II RD15_RS02940 PF01168 Alanine racemase, N-terminal domain RD15_RS02945 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS02955 PF03466 LysR substrate binding domain RD15_RS02960 PF01810 LysE type translocator RD15_RS02975 PF03447 Homoserine dehydrogenase, NAD binding domain RD15_RS02975 PF01958 Domain of unknown function DUF108 RD15_RS02985 PF01029 NusB family RD15_RS02985 PF01189 16S rRNA methyltransferase RsmB/F RD15_RS02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS02995 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS02995 PF00989 PAS fold RD15_RS02995 PF00672 HAMP domain RD15_RS03000 PF00158 Sigma-54 interaction domain RD15_RS03000 PF00072 Response regulator receiver domain RD15_RS03000 PF02954 Bacterial regulatory protein, Fis family RD15_RS03005 PF02254 TrkA-N domain RD15_RS03005 PF02080 TrkA-C domain RD15_RS03010 PF02386 Cation transport protein RD15_RS03015 PF01047 MarR family RD15_RS03025 PF12804 MobA-like NTP transferase domain RD15_RS03035 PF17645 Arylmalonate decarboxylase RD15_RS03040 PF00561 alpha/beta hydrolase fold RD15_RS03050 PF00857 Isochorismatase family RD15_RS03060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD15_RS03060 PF00355 Rieske [2Fe-2S] domain RD15_RS03065 PF14759 Reductase C-terminal RD15_RS03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS03070 PF00355 Rieske [2Fe-2S] domain RD15_RS03075 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS03080 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD15_RS03080 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD15_RS03085 PF00941 FAD binding domain in molybdopterin dehydrogenase RD15_RS03085 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD15_RS03090 PF01799 [2Fe-2S] binding domain RD15_RS03090 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS03100 PF00005 ABC transporter RD15_RS03105 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS03115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS03120 PF04107 Glutamate-cysteine ligase family 2(GCS2) RD15_RS03125 PF08241 Methyltransferase domain RD15_RS03135 PF00588 SpoU rRNA Methylase family RD15_RS03140 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03145 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RD15_RS03145 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RD15_RS03150 PF02556 Preprotein translocase subunit SecB RD15_RS03155 PF00462 Glutaredoxin RD15_RS03160 PF00581 Rhodanese-like domain RD15_RS03160 PF17773 UPF0176 acylphosphatase like domain RD15_RS03160 PF12368 Rhodanase C-terminal RD15_RS03165 PF00300 Histidine phosphatase superfamily (branch 1) RD15_RS03170 PF01551 Peptidase family M23 RD15_RS03175 PF03572 Peptidase family S41 RD15_RS03175 PF13180 PDZ domain RD15_RS03180 PF00899 ThiF family RD15_RS03190 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03205 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD15_RS03220 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS03225 PF00005 ABC transporter RD15_RS03230 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS03230 PF00005 ABC transporter RD15_RS03235 PF02653 Branched-chain amino acid transport system / permease component RD15_RS03240 PF13458 Periplasmic binding protein RD15_RS03250 PF13193 AMP-binding enzyme C-terminal domain RD15_RS03250 PF00501 AMP-binding enzyme RD15_RS03255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS03255 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS03255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS03260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD15_RS03260 PF00364 Biotin-requiring enzyme RD15_RS03260 PF02817 e3 binding domain RD15_RS03265 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS03270 PF02779 Transketolase, pyrimidine binding domain RD15_RS03270 PF02780 Transketolase, C-terminal domain RD15_RS03275 PF00676 Dehydrogenase E1 component RD15_RS03285 PF13607 Succinyl-CoA ligase like flavodoxin domain RD15_RS03285 PF13380 CoA binding domain RD15_RS03290 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS03295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS03295 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS03300 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS03305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD15_RS03305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD15_RS03320 PF01575 MaoC like domain RD15_RS03325 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS03325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS03325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS03330 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03335 PF02515 CoA-transferase family III RD15_RS03340 PF03466 LysR substrate binding domain RD15_RS03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS03345 PF00701 Dihydrodipicolinate synthetase family RD15_RS03365 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS03370 PF03466 LysR substrate binding domain RD15_RS03375 PF01565 FAD binding domain RD15_RS03375 PF09330 D-lactate dehydrogenase, membrane binding RD15_RS03380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS03380 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS03380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS03385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS03385 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS03385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS03390 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03395 PF01546 Peptidase family M20/M25/M40 RD15_RS03395 PF07687 Peptidase dimerisation domain RD15_RS03405 PF01042 Endoribonuclease L-PSP RD15_RS03415 PF00107 Zinc-binding dehydrogenase RD15_RS03415 PF08240 Alcohol dehydrogenase GroES-like domain RD15_RS03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS03420 PF03466 LysR substrate binding domain RD15_RS03425 PF13607 Succinyl-CoA ligase like flavodoxin domain RD15_RS03425 PF13380 CoA binding domain RD15_RS03430 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS03440 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03445 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RD15_RS03450 PF01380 SIS domain RD15_RS03455 PF01037 Lrp/AsnC ligand binding domain RD15_RS03460 PF02803 Thiolase, C-terminal domain RD15_RS03460 PF00108 Thiolase, N-terminal domain RD15_RS03465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD15_RS03465 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS03465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD15_RS03470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS03470 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS03470 PF12806 Acetyl-CoA dehydrogenase C-terminal like RD15_RS03470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS03475 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03480 PF00583 Acetyltransferase (GNAT) family RD15_RS03480 PF13380 CoA binding domain RD15_RS03480 PF13607 Succinyl-CoA ligase like flavodoxin domain RD15_RS03495 PF00384 Molybdopterin oxidoreductase RD15_RS03495 PF01568 Molydopterin dinucleotide binding domain RD15_RS03515 PF01488 Shikimate / quinate 5-dehydrogenase RD15_RS03515 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RD15_RS03515 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RD15_RS03520 PF03462 PCRF domain RD15_RS03520 PF00472 RF-1 domain RD15_RS03525 PF17827 PrmC N-terminal domain RD15_RS03525 PF05175 Methyltransferase small domain RD15_RS03530 PF00462 Glutaredoxin RD15_RS03535 PF02441 Flavoprotein RD15_RS03540 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS03545 PF09084 NMT1/THI5 like RD15_RS03550 PF00941 FAD binding domain in molybdopterin dehydrogenase RD15_RS03550 PF03450 CO dehydrogenase flavoprotein C-terminal domain RD15_RS03555 PF01799 [2Fe-2S] binding domain RD15_RS03555 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS03560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RD15_RS03560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD15_RS03580 PF03330 Lytic transglycolase RD15_RS03580 PF05036 Sporulation related domain RD15_RS03585 PF03668 P-loop ATPase protein family RD15_RS03595 PF00034 Cytochrome c RD15_RS03595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD15_RS03595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD15_RS03600 PF02603 HPr Serine kinase N terminus RD15_RS03600 PF07475 HPr Serine kinase C-terminal domain RD15_RS03605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RD15_RS03610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RD15_RS03615 PF00005 ABC transporter RD15_RS03635 PF01380 SIS domain RD15_RS03635 PF00571 CBS domain RD15_RS03640 PF02222 ATP-grasp domain RD15_RS03640 PF01370 NAD dependent epimerase/dehydratase family RD15_RS03645 PF00593 TonB dependent receptor RD15_RS03645 PF07715 TonB-dependent Receptor Plug Domain RD15_RS03655 PF05199 GMC oxidoreductase RD15_RS03655 PF00732 GMC oxidoreductase RD15_RS03675 PF02938 GAD domain RD15_RS03675 PF00152 tRNA synthetases class II (D, K and N) RD15_RS03675 PF01336 OB-fold nucleic acid binding domain RD15_RS03680 PF03372 Endonuclease/Exonuclease/phosphatase family RD15_RS03685 PF13091 PLD-like domain RD15_RS03710 PF13458 Periplasmic binding protein RD15_RS03715 PF01425 Amidase RD15_RS03720 PF05995 Cysteine dioxygenase type I RD15_RS03725 PF01614 Bacterial transcriptional regulator RD15_RS03725 PF09339 IclR helix-turn-helix domain RD15_RS03740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD15_RS03740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD15_RS03740 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS03745 PF05275 Copper resistance protein B precursor (CopB) RD15_RS03750 PF07732 Multicopper oxidase RD15_RS03750 PF07731 Multicopper oxidase RD15_RS03750 PF00394 Multicopper oxidase RD15_RS03780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD15_RS03780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD15_RS03780 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RD15_RS03785 PF02515 CoA-transferase family III RD15_RS03790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS03790 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS03790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS03805 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS03810 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS03815 PF01256 Carbohydrate kinase RD15_RS03835 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS03840 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS03840 PF12911 N-terminal TM domain of oligopeptide transport permease C RD15_RS03845 PF00005 ABC transporter RD15_RS03845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS03855 PF01546 Peptidase family M20/M25/M40 RD15_RS03855 PF07687 Peptidase dimerisation domain RD15_RS03865 PF13361 UvrD-like helicase C-terminal domain RD15_RS03865 PF00580 UvrD/REP helicase N-terminal domain RD15_RS03870 PF00271 Helicase conserved C-terminal domain RD15_RS03870 PF18074 Primosomal protein N C-terminal domain RD15_RS03870 PF17764 3′ DNA-binding domain (3′BD) RD15_RS03870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RD15_RS03870 PF00270 DEAD/DEAH box helicase RD15_RS03875 PF01208 Uroporphyrinogen decarboxylase (URO-D) RD15_RS03885 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RD15_RS03890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD15_RS03890 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD15_RS03895 PF00231 ATP synthase RD15_RS03900 PF00306 ATP synthase alpha/beta chain, C terminal domain RD15_RS03900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD15_RS03900 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD15_RS03905 PF00213 ATP synthase delta (OSCP) subunit RD15_RS03910 PF00430 ATP synthase B/B' CF(0) RD15_RS03915 PF00137 ATP synthase subunit C RD15_RS03920 PF00119 ATP synthase A chain RD15_RS03945 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS03950 PF17820 PDZ domain RD15_RS03950 PF13180 PDZ domain RD15_RS03955 PF13192 Thioredoxin domain RD15_RS03955 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS03965 PF01171 PP-loop family RD15_RS03975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD15_RS03975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD15_RS03975 PF01842 ACT domain RD15_RS03980 PF10411 Disulfide bond isomerase protein N-terminus RD15_RS03980 PF13098 Thioredoxin-like domain RD15_RS03985 PF01494 FAD binding domain RD15_RS03990 PF03562 MltA specific insert domain RD15_RS03990 PF06725 3D domain RD15_RS03995 PF04379 ApaG domain RD15_RS04000 PF00834 Ribulose-phosphate 3 epimerase family RD15_RS04005 PF13419 Haloacid dehalogenase-like hydrolase RD15_RS04010 PF04715 Anthranilate synthase component I, N terminal region RD15_RS04010 PF00425 chorismate binding enzyme RD15_RS04015 PF00117 Glutamine amidotransferase class-I RD15_RS04020 PF02885 Glycosyl transferase family, helical bundle domain RD15_RS04020 PF00591 Glycosyl transferase family, a/b domain RD15_RS04025 PF00218 Indole-3-glycerol phosphate synthase RD15_RS04050 PF18158 Adaptive response protein AidB N-terminal domain RD15_RS04050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS04050 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS04055 PF03466 LysR substrate binding domain RD15_RS04060 PF00551 Formyl transferase RD15_RS04070 PF01613 Flavin reductase like domain RD15_RS04075 PF01243 Pyridoxamine 5'-phosphate oxidase RD15_RS04075 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RD15_RS04085 PF07690 Major Facilitator Superfamily RD15_RS04090 PF00899 ThiF family RD15_RS04095 PF00392 Bacterial regulatory proteins, gntR family RD15_RS04095 PF07702 UTRA domain RD15_RS04100 PF00501 AMP-binding enzyme RD15_RS04100 PF13193 AMP-binding enzyme C-terminal domain RD15_RS04105 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS04120 PF01063 Amino-transferase class IV RD15_RS04125 PF04715 Anthranilate synthase component I, N terminal region RD15_RS04125 PF00425 chorismate binding enzyme RD15_RS04130 PF17760 UvrA interaction domain RD15_RS04130 PF17755 UvrA DNA-binding domain RD15_RS04130 PF00005 ABC transporter RD15_RS04140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS04140 PF03466 LysR substrate binding domain RD15_RS04145 PF00535 Glycosyl transferase family 2 RD15_RS04150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS04155 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS04165 PF00005 ABC transporter RD15_RS04165 PF12848 ABC transporter RD15_RS04185 PF03776 Septum formation topological specificity factor MinE RD15_RS04190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RD15_RS04195 PF03775 Septum formation inhibitor MinC, C-terminal domain RD15_RS04195 PF05209 Septum formation inhibitor MinC, N-terminal domain RD15_RS04200 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD15_RS04200 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RD15_RS04205 PF01654 Cytochrome bd terminal oxidase subunit I RD15_RS04215 PF13493 Domain of unknown function (DUF4118) RD15_RS04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS04215 PF02702 Osmosensitive K+ channel His kinase sensor domain RD15_RS04220 PF00072 Response regulator receiver domain RD15_RS04220 PF00486 Transcriptional regulatory protein, C terminal RD15_RS04235 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS04240 PF04391 Protein of unknown function (DUF533) RD15_RS04260 PF01476 LysM domain RD15_RS04260 PF01464 Transglycosylase SLT domain RD15_RS04265 PF00753 Metallo-beta-lactamase superfamily RD15_RS04265 PF16123 Hydroxyacylglutathione hydrolase C-terminus RD15_RS04270 PF08241 Methyltransferase domain RD15_RS04275 PF00075 RNase H RD15_RS04320 PF01575 MaoC like domain RD15_RS04325 PF02803 Thiolase, C-terminal domain RD15_RS04325 PF00108 Thiolase, N-terminal domain RD15_RS04335 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS04340 PF00106 short chain dehydrogenase RD15_RS04350 PF00005 ABC transporter RD15_RS04350 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS04355 PF00005 ABC transporter RD15_RS04360 PF02653 Branched-chain amino acid transport system / permease component RD15_RS04370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS04370 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS04370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS04375 PF08361 MAATS-type transcriptional repressor, C-terminal region RD15_RS04375 PF00440 Bacterial regulatory proteins, tetR family RD15_RS04380 PF14535 AMP-binding enzyme C-terminal domain RD15_RS04380 PF00501 AMP-binding enzyme RD15_RS04385 PF02515 CoA-transferase family III RD15_RS04405 PF04285 Protein of unknown function (DUF444) RD15_RS04410 PF04293 SpoVR like protein RD15_RS04425 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS04430 PF07476 Methylaspartate ammonia-lyase C-terminus RD15_RS04430 PF05034 Methylaspartate ammonia-lyase N-terminus RD15_RS04435 PF00392 Bacterial regulatory proteins, gntR family RD15_RS04435 PF07702 UTRA domain RD15_RS04450 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS04455 PF00376 MerR family regulatory protein RD15_RS04455 PF09278 MerR, DNA binding RD15_RS04460 PF01774 UreD urease accessory protein RD15_RS04465 PF00547 Urease, gamma subunit RD15_RS04470 PF04955 HupE / UreJ protein RD15_RS04475 PF00699 Urease beta subunit RD15_RS04480 PF00449 Urease alpha-subunit, N-terminal domain RD15_RS04480 PF01979 Amidohydrolase family RD15_RS04485 PF05194 UreE urease accessory protein, C-terminal domain RD15_RS04485 PF02814 UreE urease accessory protein, N-terminal domain RD15_RS04490 PF01730 UreF RD15_RS04495 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD15_RS04505 PF07364 Metallopeptidase family M81 RD15_RS04505 PF07171 MlrC C-terminus RD15_RS04515 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS04520 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS04525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS04530 PF00171 Aldehyde dehydrogenase family RD15_RS04535 PF00202 Aminotransferase class-III RD15_RS04540 PF00392 Bacterial regulatory proteins, gntR family RD15_RS04540 PF00155 Aminotransferase class I and II RD15_RS04545 PF00186 Dihydrofolate reductase RD15_RS04550 PF00303 Thymidylate synthase RD15_RS04560 PF03232 Ubiquinone biosynthesis protein COQ7 RD15_RS04565 PF00953 Glycosyl transferase family 4 RD15_RS04570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD15_RS04570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD15_RS04570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD15_RS04575 PF01370 NAD dependent epimerase/dehydratase family RD15_RS04580 PF03023 Lipid II flippase MurJ RD15_RS04585 PF13439 Glycosyltransferase Family 4 RD15_RS04585 PF00534 Glycosyl transferases group 1 RD15_RS04590 PF13537 Glutamine amidotransferase domain RD15_RS04590 PF00733 Asparagine synthase RD15_RS04595 PF00534 Glycosyl transferases group 1 RD15_RS04595 PF13439 Glycosyltransferase Family 4 RD15_RS04600 PF00534 Glycosyl transferases group 1 RD15_RS04600 PF13439 Glycosyltransferase Family 4 RD15_RS04605 PF00534 Glycosyl transferases group 1 RD15_RS04605 PF13477 Glycosyl transferase 4-like RD15_RS04610 PF00342 Phosphoglucose isomerase RD15_RS04615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD15_RS04615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD15_RS04615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD15_RS04615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD15_RS04625 PF01565 FAD binding domain RD15_RS04625 PF02913 FAD linked oxidases, C-terminal domain RD15_RS04630 PF00486 Transcriptional regulatory protein, C terminal RD15_RS04630 PF00072 Response regulator receiver domain RD15_RS04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS04635 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS04635 PF08521 Two-component sensor kinase N-terminal RD15_RS04640 PF00884 Sulfatase RD15_RS04650 PF04209 homogentisate 1,2-dioxygenase RD15_RS04655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS04655 PF03466 LysR substrate binding domain RD15_RS04665 PF01494 FAD binding domain RD15_RS04675 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RD15_RS04675 PF06827 Zinc finger found in FPG and IleRS RD15_RS04675 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RD15_RS04685 PF03550 Outer membrane lipoprotein LolB RD15_RS04690 PF08544 GHMP kinases C terminal RD15_RS04690 PF00288 GHMP kinases N terminal domain RD15_RS04700 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RD15_RS04700 PF14572 Phosphoribosyl synthetase-associated domain RD15_RS04705 PF01386 Ribosomal L25p family RD15_RS04705 PF14693 Ribosomal protein TL5, C-terminal domain RD15_RS04710 PF01195 Peptidyl-tRNA hydrolase RD15_RS04720 PF01926 50S ribosome-binding GTPase RD15_RS04720 PF06071 Protein of unknown function (DUF933) RD15_RS04725 PF13356 Arm DNA-binding domain RD15_RS04725 PF00589 Phage integrase family RD15_RS04740 PF01555 DNA methylase RD15_RS04745 PF13175 AAA ATPase domain RD15_RS04770 PF00580 UvrD/REP helicase N-terminal domain RD15_RS04770 PF13361 UvrD-like helicase C-terminal domain RD15_RS04785 PF01266 FAD dependent oxidoreductase RD15_RS04800 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS04810 PF01810 LysE type translocator RD15_RS04855 PF00561 alpha/beta hydrolase fold RD15_RS04865 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS04870 PF03459 TOBE domain RD15_RS04870 PF00005 ABC transporter RD15_RS04875 PF13091 PLD-like domain RD15_RS04885 PF01923 Cobalamin adenosyltransferase RD15_RS04895 PF07724 AAA domain (Cdc48 subfamily) RD15_RS04895 PF10431 C-terminal, D2-small domain, of ClpB protein RD15_RS04895 PF00004 ATPase family associated with various cellular activities (AAA) RD15_RS04900 PF00227 Proteasome subunit RD15_RS04905 PF01258 Prokaryotic dksA/traR C4-type zinc finger RD15_RS04910 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD15_RS04910 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD15_RS04915 PF01475 Ferric uptake regulator family RD15_RS04925 PF00005 ABC transporter RD15_RS04930 PF00950 ABC 3 transport family RD15_RS04935 PF01297 Zinc-uptake complex component A periplasmic RD15_RS04945 PF03824 High-affinity nickel-transport protein RD15_RS04950 PF07715 TonB-dependent Receptor Plug Domain RD15_RS04950 PF00593 TonB dependent receptor RD15_RS04955 PF00589 Phage integrase family RD15_RS04955 PF02899 Phage integrase, N-terminal SAM-like domain RD15_RS04965 PF01678 Diaminopimelate epimerase RD15_RS04970 PF03279 Bacterial lipid A biosynthesis acyltransferase RD15_RS04980 PF00438 S-adenosylmethionine synthetase, N-terminal domain RD15_RS04980 PF02772 S-adenosylmethionine synthetase, central domain RD15_RS04980 PF02773 S-adenosylmethionine synthetase, C-terminal domain RD15_RS04990 PF13439 Glycosyltransferase Family 4 RD15_RS04990 PF00534 Glycosyl transferases group 1 RD15_RS04995 PF05221 S-adenosyl-L-homocysteine hydrolase RD15_RS04995 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RD15_RS05000 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RD15_RS05005 PF02219 Methylenetetrahydrofolate reductase RD15_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS05015 PF03466 LysR substrate binding domain RD15_RS05020 PF00850 Histone deacetylase domain RD15_RS05025 PF07690 Major Facilitator Superfamily RD15_RS05025 PF00083 Sugar (and other) transporter RD15_RS05035 PF14718 Soluble lytic murein transglycosylase L domain RD15_RS05035 PF01464 Transglycosylase SLT domain RD15_RS05040 PF12627 Probable RNA and SrmB- binding site of polymerase A RD15_RS05040 PF01743 Poly A polymerase head domain RD15_RS05050 PF00271 Helicase conserved C-terminal domain RD15_RS05050 PF00270 DEAD/DEAH box helicase RD15_RS05055 PF03167 Uracil DNA glycosylase superfamily RD15_RS05065 PF02525 Flavodoxin-like fold RD15_RS05070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD15_RS05070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD15_RS05080 PF01970 Tripartite tricarboxylate transporter TctA family RD15_RS05120 PF01790 Prolipoprotein diacylglyceryl transferase RD15_RS05125 PF00920 Dehydratase family RD15_RS05130 PF00034 Cytochrome c RD15_RS05135 PF01625 Peptide methionine sulfoxide reductase RD15_RS05140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD15_RS05145 PF01037 Lrp/AsnC ligand binding domain RD15_RS05185 PF01546 Peptidase family M20/M25/M40 RD15_RS05185 PF07687 Peptidase dimerisation domain RD15_RS05190 PF01979 Amidohydrolase family RD15_RS05195 PF16326 ABC transporter C-terminal domain RD15_RS05195 PF12848 ABC transporter RD15_RS05195 PF00005 ABC transporter RD15_RS05205 PF02381 MraZ protein, putative antitoxin-like RD15_RS05210 PF01795 MraW methylase family RD15_RS05215 PF04999 Cell division protein FtsL RD15_RS05220 PF00905 Penicillin binding protein transpeptidase domain RD15_RS05220 PF03717 Penicillin-binding Protein dimerisation domain RD15_RS05225 PF02875 Mur ligase family, glutamate ligase domain RD15_RS05225 PF08245 Mur ligase middle domain RD15_RS05230 PF00953 Glycosyl transferase family 4 RD15_RS05235 PF02875 Mur ligase family, glutamate ligase domain RD15_RS05235 PF08245 Mur ligase middle domain RD15_RS05240 PF01098 Cell cycle protein RD15_RS05245 PF04101 Glycosyltransferase family 28 C-terminal domain RD15_RS05245 PF03033 Glycosyltransferase family 28 N-terminal domain RD15_RS05250 PF01225 Mur ligase family, catalytic domain RD15_RS05250 PF02875 Mur ligase family, glutamate ligase domain RD15_RS05250 PF08245 Mur ligase middle domain RD15_RS05255 PF07478 D-ala D-ala ligase C-terminus RD15_RS05255 PF01820 D-ala D-ala ligase N-terminus RD15_RS05260 PF03799 Cell division protein FtsQ RD15_RS05260 PF08478 POTRA domain, FtsQ-type RD15_RS05265 PF02491 SHS2 domain inserted in FTSA RD15_RS05270 PF12327 FtsZ family, C-terminal domain RD15_RS05270 PF00091 Tubulin/FtsZ family, GTPase domain RD15_RS05275 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RD15_RS05285 PF01476 LysM domain RD15_RS05285 PF01551 Peptidase family M23 RD15_RS05285 PF08525 Opacity-associated protein A N-terminal motif RD15_RS05290 PF07516 SecA Wing and Scaffold domain RD15_RS05290 PF07517 SecA DEAD-like domain RD15_RS05290 PF02810 SEC-C motif RD15_RS05290 PF01043 SecA preprotein cross-linking domain RD15_RS05300 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS05310 PF00106 short chain dehydrogenase RD15_RS05315 PF01266 FAD dependent oxidoreductase RD15_RS05320 PF01037 Lrp/AsnC ligand binding domain RD15_RS05330 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP RD15_RS05340 PF08501 Shikimate dehydrogenase substrate binding domain RD15_RS05340 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RD15_RS05340 PF01488 Shikimate / quinate 5-dehydrogenase RD15_RS05350 PF00773 RNB domain RD15_RS05355 PF05728 Uncharacterised protein family (UPF0227) RD15_RS05360 PF02875 Mur ligase family, glutamate ligase domain RD15_RS05360 PF01225 Mur ligase family, catalytic domain RD15_RS05360 PF08245 Mur ligase middle domain RD15_RS05365 PF08534 Redoxin RD15_RS05370 PF01220 Dehydroquinase class II RD15_RS05375 PF00364 Biotin-requiring enzyme RD15_RS05380 PF00289 Biotin carboxylase, N-terminal domain RD15_RS05380 PF02785 Biotin carboxylase C-terminal domain RD15_RS05380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD15_RS05395 PF00294 pfkB family carbohydrate kinase RD15_RS05420 PF03062 MBOAT, membrane-bound O-acyltransferase family RD15_RS05425 PF00501 AMP-binding enzyme RD15_RS05425 PF13193 AMP-binding enzyme C-terminal domain RD15_RS05440 PF00268 Ribonucleotide reductase, small chain RD15_RS05445 PF03477 ATP cone domain RD15_RS05445 PF00317 Ribonucleotide reductase, all-alpha domain RD15_RS05445 PF02867 Ribonucleotide reductase, barrel domain RD15_RS05460 PF01037 Lrp/AsnC ligand binding domain RD15_RS05475 PF00749 tRNA synthetases class I (E and Q), catalytic domain RD15_RS05480 PF13380 CoA binding domain RD15_RS05480 PF13607 Succinyl-CoA ligase like flavodoxin domain RD15_RS05480 PF00583 Acetyltransferase (GNAT) family RD15_RS05490 PF00392 Bacterial regulatory proteins, gntR family RD15_RS05490 PF07729 FCD domain RD15_RS05500 PF00271 Helicase conserved C-terminal domain RD15_RS05500 PF03880 DbpA RNA binding domain RD15_RS05500 PF00270 DEAD/DEAH box helicase RD15_RS05505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RD15_RS05510 PF00857 Isochorismatase family RD15_RS05515 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS05520 PF00005 ABC transporter RD15_RS05530 PF02230 Phospholipase/Carboxylesterase RD15_RS05535 PF04751 Protein of unknown function (DUF615) RD15_RS05540 PF01523 Putative modulator of DNA gyrase RD15_RS05545 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS05550 PF00572 Ribosomal protein L13 RD15_RS05555 PF00380 Ribosomal protein S9/S16 RD15_RS05560 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD15_RS05560 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD15_RS05570 PF01521 Iron-sulphur cluster biosynthesis RD15_RS05575 PF03702 Anhydro-N-acetylmuramic acid kinase RD15_RS05580 PF08460 Bacterial SH3 domain RD15_RS05580 PF01551 Peptidase family M23 RD15_RS05590 PF00579 tRNA synthetases class I (W and Y) RD15_RS05590 PF01479 S4 domain RD15_RS05600 PF00464 Serine hydroxymethyltransferase RD15_RS05605 PF03477 ATP cone domain RD15_RS05620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD15_RS05620 PF01872 RibD C-terminal domain RD15_RS05635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS05635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS05635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS05635 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS05635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS05635 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS05645 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS05650 PF03466 LysR substrate binding domain RD15_RS05655 PF02515 CoA-transferase family III RD15_RS05675 PF02678 Pirin RD15_RS05675 PF05726 Pirin C-terminal cupin domain RD15_RS05690 PF00072 Response regulator receiver domain RD15_RS05695 PF06481 COX Aromatic Rich Motif RD15_RS05695 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD15_RS05700 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD15_RS05705 PF00510 Cytochrome c oxidase subunit III RD15_RS05710 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RD15_RS05715 PF01022 Bacterial regulatory protein, arsR family RD15_RS05720 PF07690 Major Facilitator Superfamily RD15_RS05735 PF05114 Protein of unknown function (DUF692) RD15_RS05750 PF07715 TonB-dependent Receptor Plug Domain RD15_RS05750 PF00593 TonB dependent receptor RD15_RS05765 PF01476 LysM domain RD15_RS05765 PF01551 Peptidase family M23 RD15_RS05780 PF04461 Protein of unknown function (DUF520) RD15_RS05790 PF08281 Sigma-70, region 4 RD15_RS05790 PF04542 Sigma-70 region 2 RD15_RS05810 PF00795 Carbon-nitrogen hydrolase RD15_RS05815 PF01523 Putative modulator of DNA gyrase RD15_RS05820 PF00793 DAHP synthetase I family RD15_RS05825 PF13332 Hemagglutinin repeat RD15_RS05825 PF13018 Extended Signal Peptide of Type V secretion system RD15_RS05825 PF05860 haemagglutination activity domain RD15_RS05825 PF05594 Haemagluttinin repeat RD15_RS05825 PF05594 Haemagluttinin repeat RD15_RS05825 PF13332 Hemagglutinin repeat RD15_RS05825 PF13018 Extended Signal Peptide of Type V secretion system RD15_RS05825 PF05860 haemagglutination activity domain RD15_RS05830 PF02913 FAD linked oxidases, C-terminal domain RD15_RS05830 PF01565 FAD binding domain RD15_RS05835 PF02913 FAD linked oxidases, C-terminal domain RD15_RS05835 PF01565 FAD binding domain RD15_RS05840 PF01565 FAD binding domain RD15_RS05845 PF13183 4Fe-4S dicluster domain RD15_RS05845 PF02754 Cysteine-rich domain RD15_RS05850 PF00756 Putative esterase RD15_RS05855 PF00593 TonB dependent receptor RD15_RS05855 PF07715 TonB-dependent Receptor Plug Domain RD15_RS05870 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RD15_RS05870 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RD15_RS05880 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS05885 PF03466 LysR substrate binding domain RD15_RS05895 PF01925 Sulfite exporter TauE/SafE RD15_RS05900 PF00043 Glutathione S-transferase, C-terminal domain RD15_RS05900 PF13417 Glutathione S-transferase, N-terminal domain RD15_RS05905 PF08328 Adenylosuccinate lyase C-terminal RD15_RS05905 PF00206 Lyase RD15_RS05910 PF01322 Cytochrome C' RD15_RS05930 PF01594 AI-2E family transporter RD15_RS05940 PF07729 FCD domain RD15_RS05940 PF00392 Bacterial regulatory proteins, gntR family RD15_RS05950 PF01425 Amidase RD15_RS05955 PF02515 CoA-transferase family III RD15_RS05960 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS05975 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS05980 PF00005 ABC transporter RD15_RS05995 PF09339 IclR helix-turn-helix domain RD15_RS05995 PF01614 Bacterial transcriptional regulator RD15_RS06005 PF13193 AMP-binding enzyme C-terminal domain RD15_RS06005 PF00501 AMP-binding enzyme RD15_RS06010 PF01042 Endoribonuclease L-PSP RD15_RS06015 PF02653 Branched-chain amino acid transport system / permease component RD15_RS06030 PF00005 ABC transporter RD15_RS06035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD15_RS06050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS06050 PF03466 LysR substrate binding domain RD15_RS06060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD15_RS06065 PF07690 Major Facilitator Superfamily RD15_RS06070 PF03466 LysR substrate binding domain RD15_RS06070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS06085 PF01425 Amidase RD15_RS06090 PF00677 Lumazine binding domain RD15_RS06095 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS06100 PF01037 Lrp/AsnC ligand binding domain RD15_RS06100 PF13404 AsnC-type helix-turn-helix domain RD15_RS06110 PF13193 AMP-binding enzyme C-terminal domain RD15_RS06110 PF00501 AMP-binding enzyme RD15_RS06120 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS06125 PF00005 ABC transporter RD15_RS06140 PF00107 Zinc-binding dehydrogenase RD15_RS06140 PF08240 Alcohol dehydrogenase GroES-like domain RD15_RS06160 PF00403 Heavy-metal-associated domain RD15_RS06165 PF01966 HD domain RD15_RS06170 PF00155 Aminotransferase class I and II RD15_RS06175 PF03466 LysR substrate binding domain RD15_RS06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS06185 PF00083 Sugar (and other) transporter RD15_RS06205 PF13609 Gram-negative porin RD15_RS06210 PF02548 Ketopantoate hydroxymethyltransferase RD15_RS06215 PF03466 LysR substrate binding domain RD15_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS06260 PF00440 Bacterial regulatory proteins, tetR family RD15_RS06265 PF05170 AsmA family RD15_RS06270 PF03352 Methyladenine glycosylase RD15_RS06275 PF09278 MerR, DNA binding RD15_RS06275 PF00376 MerR family regulatory protein RD15_RS06290 PF01547 Bacterial extracellular solute-binding protein RD15_RS06300 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS06300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD15_RS06305 PF00005 ABC transporter RD15_RS06305 PF08402 TOBE domain RD15_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS06315 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS06315 PF14785 Maltose transport system permease protein MalF P2 domain RD15_RS06335 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS06340 PF07729 FCD domain RD15_RS06340 PF00392 Bacterial regulatory proteins, gntR family RD15_RS06365 PF00465 Iron-containing alcohol dehydrogenase RD15_RS06380 PF03180 NLPA lipoprotein RD15_RS06385 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS06390 PF00005 ABC transporter RD15_RS06390 PF09383 NIL domain RD15_RS06395 PF13802 Galactose mutarotase-like RD15_RS06395 PF01055 Glycosyl hydrolases family 31 RD15_RS06405 PF00459 Inositol monophosphatase family RD15_RS06420 PF00501 AMP-binding enzyme RD15_RS06420 PF13193 AMP-binding enzyme C-terminal domain RD15_RS06425 PF01546 Peptidase family M20/M25/M40 RD15_RS06425 PF07687 Peptidase dimerisation domain RD15_RS06430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS06430 PF03466 LysR substrate binding domain RD15_RS06435 PF03601 Conserved hypothetical protein 698 RD15_RS06440 PF03061 Thioesterase superfamily RD15_RS06445 PF03448 MgtE intracellular N domain RD15_RS06445 PF01769 Divalent cation transporter RD15_RS06445 PF00571 CBS domain RD15_RS06465 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS06475 PF02609 Exonuclease VII small subunit RD15_RS06480 PF00348 Polyprenyl synthetase RD15_RS06485 PF02779 Transketolase, pyrimidine binding domain RD15_RS06485 PF02780 Transketolase, C-terminal domain RD15_RS06485 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RD15_RS06490 PF02649 Type I GTP cyclohydrolase folE2 RD15_RS06495 PF01250 Ribosomal protein S6 RD15_RS06505 PF01084 Ribosomal protein S18 RD15_RS06510 PF03948 Ribosomal protein L9, C-terminal domain RD15_RS06510 PF01281 Ribosomal protein L9, N-terminal domain RD15_RS06520 PF03796 DnaB-like helicase C terminal domain RD15_RS06520 PF00772 DnaB-like helicase N terminal domain RD15_RS06525 PF13593 SBF-like CPA transporter family (DUF4137) RD15_RS06530 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD15_RS06535 PF02562 PhoH-like protein RD15_RS06535 PF13638 PIN domain RD15_RS06540 PF00578 AhpC/TSA family RD15_RS06545 PF04430 Protein of unknown function (DUF498/DUF598) RD15_RS06550 PF00155 Aminotransferase class I and II RD15_RS06555 PF01842 ACT domain RD15_RS06555 PF03447 Homoserine dehydrogenase, NAD binding domain RD15_RS06555 PF00742 Homoserine dehydrogenase RD15_RS06560 PF14821 Threonine synthase N terminus RD15_RS06560 PF00291 Pyridoxal-phosphate dependent enzyme RD15_RS06575 PF02615 Malate/L-lactate dehydrogenase RD15_RS06585 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS06600 PF03328 HpcH/HpaI aldolase/citrate lyase family RD15_RS06605 PF01649 Ribosomal protein S20 RD15_RS06615 PF03023 Lipid II flippase MurJ RD15_RS06620 PF00106 short chain dehydrogenase RD15_RS06625 PF05191 Adenylate kinase, active site lid RD15_RS06630 PF02348 Cytidylyltransferase RD15_RS06635 PF03966 Trm112p-like protein RD15_RS06640 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RD15_RS06645 PF02472 Biopolymer transport protein ExbD/TolR RD15_RS06650 PF01618 MotA/TolQ/ExbB proton channel family RD15_RS06660 PF02601 Exonuclease VII, large subunit RD15_RS06660 PF13742 OB-fold nucleic acid binding domain RD15_RS06665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RD15_RS06665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RD15_RS06670 PF00654 Voltage gated chloride channel RD15_RS06675 PF00108 Thiolase, N-terminal domain RD15_RS06675 PF02803 Thiolase, C-terminal domain RD15_RS06685 PF00313 'Cold-shock' DNA-binding domain RD15_RS06690 PF02617 ATP-dependent Clp protease adaptor protein ClpS RD15_RS06695 PF11974 Bacterial alpha-2-macroglobulin MG3 domain RD15_RS06695 PF07703 Alpha-2-macroglobulin bait region domain RD15_RS06695 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain RD15_RS06695 PF01835 MG2 domain RD15_RS06695 PF00207 Alpha-2-macroglobulin family RD15_RS06695 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain RD15_RS06695 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain RD15_RS06695 PF17962 Bacterial macroglobulin domain 6 RD15_RS06700 PF00905 Penicillin binding protein transpeptidase domain RD15_RS06700 PF00912 Transglycosylase RD15_RS06700 PF06832 Penicillin-Binding Protein C-terminus Family RD15_RS06705 PF00004 ATPase family associated with various cellular activities (AAA) RD15_RS06705 PF17871 AAA lid domain RD15_RS06705 PF07724 AAA domain (Cdc48 subfamily) RD15_RS06705 PF10431 C-terminal, D2-small domain, of ClpB protein RD15_RS06705 PF02861 Clp amino terminal domain, pathogenicity island component RD15_RS06710 PF04403 Paraquat-inducible protein A RD15_RS06715 PF02470 MlaD protein RD15_RS06725 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RD15_RS06725 PF14850 DNA-binding domain of Proline dehydrogenase RD15_RS06725 PF01619 Proline dehydrogenase RD15_RS06725 PF00171 Aldehyde dehydrogenase family RD15_RS06735 PF13458 Periplasmic binding protein RD15_RS06740 PF02653 Branched-chain amino acid transport system / permease component RD15_RS06745 PF11862 Domain of unknown function (DUF3382) RD15_RS06745 PF02653 Branched-chain amino acid transport system / permease component RD15_RS06750 PF00005 ABC transporter RD15_RS06750 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS06755 PF00005 ABC transporter RD15_RS06760 PF07690 Major Facilitator Superfamily RD15_RS06765 PF00440 Bacterial regulatory proteins, tetR family RD15_RS06775 PF03797 Autotransporter beta-domain RD15_RS06775 PF03212 Pertactin RD15_RS06785 PF00543 Nitrogen regulatory protein P-II RD15_RS06790 PF04380 Membrane fusogenic activity RD15_RS06805 PF00083 Sugar (and other) transporter RD15_RS06805 PF07690 Major Facilitator Superfamily RD15_RS06815 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD15_RS06820 PF00510 Cytochrome c oxidase subunit III RD15_RS06825 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RD15_RS06830 PF02104 SURF1 family RD15_RS06850 PF13411 MerR HTH family regulatory protein RD15_RS06855 PF00403 Heavy-metal-associated domain RD15_RS06875 PF04055 Radical SAM superfamily RD15_RS06875 PF06968 Biotin and Thiamin Synthesis associated domain RD15_RS06890 PF08534 Redoxin RD15_RS06900 PF01738 Dienelactone hydrolase family RD15_RS06910 PF01967 MoaC family RD15_RS06920 PF02391 MoaE protein RD15_RS06925 PF00994 Probable molybdopterin binding domain RD15_RS06930 PF00994 Probable molybdopterin binding domain RD15_RS06930 PF03454 MoeA C-terminal region (domain IV) RD15_RS06930 PF03453 MoeA N-terminal region (domain I and II) RD15_RS06935 PF06463 Molybdenum Cofactor Synthesis C RD15_RS06935 PF04055 Radical SAM superfamily RD15_RS06955 PF00206 Lyase RD15_RS06955 PF14698 Argininosuccinate lyase C-terminal RD15_RS06960 PF00924 Mechanosensitive ion channel RD15_RS06965 PF00795 Carbon-nitrogen hydrolase RD15_RS06965 PF02540 NAD synthase RD15_RS06970 PF00543 Nitrogen regulatory protein P-II RD15_RS06995 PF03466 LysR substrate binding domain RD15_RS06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS07005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS07010 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS07015 PF12911 N-terminal TM domain of oligopeptide transport permease C RD15_RS07020 PF03193 RsgA GTPase RD15_RS07025 PF01435 Peptidase family M48 RD15_RS07030 PF00929 Exonuclease RD15_RS07035 PF03853 YjeF-related protein N-terminus RD15_RS07040 PF08223 PaaX-like protein C-terminal domain RD15_RS07040 PF07848 PaaX-like protein RD15_RS07045 PF05138 Phenylacetic acid catabolic protein RD15_RS07050 PF06243 Phenylacetic acid degradation B RD15_RS07055 PF05138 Phenylacetic acid catabolic protein RD15_RS07060 PF01883 Iron-sulfur cluster assembly protein RD15_RS07065 PF00175 Oxidoreductase NAD-binding domain RD15_RS07065 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS07065 PF00970 Oxidoreductase FAD-binding domain RD15_RS07075 PF00171 Aldehyde dehydrogenase family RD15_RS07080 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS07085 PF03061 Thioesterase superfamily RD15_RS07090 PF00501 AMP-binding enzyme RD15_RS07090 PF14535 AMP-binding enzyme C-terminal domain RD15_RS07095 PF16970 Type-1 fimbrial protein, A RD15_RS07105 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS07110 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD15_RS07110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS07115 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD15_RS07120 PF02769 AIR synthase related protein, C-terminal domain RD15_RS07120 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RD15_RS07120 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RD15_RS07125 PF13332 Hemagglutinin repeat RD15_RS07125 PF13018 Extended Signal Peptide of Type V secretion system RD15_RS07125 PF05860 haemagglutination activity domain RD15_RS07125 PF05594 Haemagluttinin repeat RD15_RS07150 PF00596 Class II Aldolase and Adducin N-terminal domain RD15_RS07155 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS07160 PF01242 6-pyruvoyl tetrahydropterin synthase RD15_RS07170 PF00472 RF-1 domain RD15_RS07190 PF00701 Dihydrodipicolinate synthetase family RD15_RS07195 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS07220 PF00890 FAD binding domain RD15_RS07220 PF14537 Cytochrome c3 RD15_RS07225 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS07240 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RD15_RS07240 PF01266 FAD dependent oxidoreductase RD15_RS07245 PF00455 DeoR C terminal sensor domain RD15_RS07245 PF08220 DeoR-like helix-turn-helix domain RD15_RS07250 PF17912 MalK OB fold domain RD15_RS07250 PF00005 ABC transporter RD15_RS07255 PF00005 ABC transporter RD15_RS07255 PF17912 MalK OB fold domain RD15_RS07265 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS07290 PF01037 Lrp/AsnC ligand binding domain RD15_RS07295 PF01266 FAD dependent oxidoreductase RD15_RS07300 PF12320 Type 5 capsule protein repressor C-terminal domain RD15_RS07300 PF00149 Calcineurin-like phosphoesterase RD15_RS07325 PF00196 Bacterial regulatory proteins, luxR family RD15_RS07325 PF00072 Response regulator receiver domain RD15_RS07345 PF00478 IMP dehydrogenase / GMP reductase domain RD15_RS07345 PF00571 CBS domain RD15_RS07350 PF00958 GMP synthase C terminal domain RD15_RS07350 PF00117 Glutamine amidotransferase class-I RD15_RS07350 PF02540 NAD synthase RD15_RS07360 PF07804 HipA-like C-terminal domain RD15_RS07360 PF13657 HipA N-terminal domain RD15_RS07370 PF07690 Major Facilitator Superfamily RD15_RS07385 PF01979 Amidohydrolase family RD15_RS07395 PF00005 ABC transporter RD15_RS07400 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS07415 PF01965 DJ-1/PfpI family RD15_RS07420 PF01740 STAS domain RD15_RS07420 PF00916 Sulfate permease family RD15_RS07425 PF00753 Metallo-beta-lactamase superfamily RD15_RS07425 PF10996 Beta-Casp domain RD15_RS07425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RD15_RS07445 PF12706 Beta-lactamase superfamily domain RD15_RS07450 PF12833 Helix-turn-helix domain RD15_RS07450 PF01965 DJ-1/PfpI family RD15_RS07455 PF03466 LysR substrate binding domain RD15_RS07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS07470 PF00107 Zinc-binding dehydrogenase RD15_RS07470 PF08240 Alcohol dehydrogenase GroES-like domain RD15_RS07475 PF07690 Major Facilitator Superfamily RD15_RS07480 PF00155 Aminotransferase class I and II RD15_RS07480 PF00392 Bacterial regulatory proteins, gntR family RD15_RS07490 PF01810 LysE type translocator RD15_RS07505 PF01546 Peptidase family M20/M25/M40 RD15_RS07505 PF07687 Peptidase dimerisation domain RD15_RS07510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS07520 PF12911 N-terminal TM domain of oligopeptide transport permease C RD15_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS07525 PF00005 ABC transporter RD15_RS07525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS07530 PF00356 Bacterial regulatory proteins, lacI family RD15_RS07555 PF09335 SNARE associated Golgi protein RD15_RS07565 PF13847 Methyltransferase domain RD15_RS07580 PF00155 Aminotransferase class I and II RD15_RS07580 PF00392 Bacterial regulatory proteins, gntR family RD15_RS07590 PF00692 dUTPase RD15_RS07600 PF01632 Ribosomal protein L35 RD15_RS07605 PF00453 Ribosomal protein L20 RD15_RS07610 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RD15_RS07610 PF01409 tRNA synthetases class II core domain (F) RD15_RS07615 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RD15_RS07615 PF01588 Putative tRNA binding domain RD15_RS07615 PF03147 Ferredoxin-fold anticodon binding domain RD15_RS07615 PF03484 tRNA synthetase B5 domain RD15_RS07615 PF03483 B3/4 domain RD15_RS07620 PF00216 Bacterial DNA-binding protein RD15_RS07670 PF04231 Endonuclease I RD15_RS07690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD15_RS07690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD15_RS07695 PF04381 Putative exonuclease, RdgC RD15_RS07705 PF02515 CoA-transferase family III RD15_RS07710 PF03466 LysR substrate binding domain RD15_RS07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS07730 PF00106 short chain dehydrogenase RD15_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS07745 PF08402 TOBE domain RD15_RS07745 PF00005 ABC transporter RD15_RS07750 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS07750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD15_RS07750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD15_RS07755 PF08946 Osmosensory transporter coiled coil RD15_RS07755 PF00083 Sugar (and other) transporter RD15_RS07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS07760 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS07765 PF00072 Response regulator receiver domain RD15_RS07765 PF00486 Transcriptional regulatory protein, C terminal RD15_RS07770 PF00154 recA bacterial DNA recombination protein RD15_RS07775 PF02631 RecX family RD15_RS07780 PF03466 LysR substrate binding domain RD15_RS07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS07785 PF08267 Cobalamin-independent synthase, N-terminal domain RD15_RS07785 PF01717 Cobalamin-independent synthase, Catalytic domain RD15_RS07795 PF00549 CoA-ligase RD15_RS07795 PF08442 ATP-grasp domain RD15_RS07800 PF02629 CoA binding domain RD15_RS07800 PF00549 CoA-ligase RD15_RS07805 PF03741 Integral membrane protein TerC family RD15_RS07810 PF03741 Integral membrane protein TerC family RD15_RS07815 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RD15_RS07815 PF03900 Porphobilinogen deaminase, C-terminal domain RD15_RS07835 PF00719 Inorganic pyrophosphatase RD15_RS07840 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD15_RS07875 PF13629 Pilus formation protein N terminal region RD15_RS07875 PF00263 Bacterial type II and III secretion system protein RD15_RS07875 PF04972 BON domain RD15_RS07880 PF00437 Type II/IV secretion system protein RD15_RS07900 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS07905 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD15_RS07905 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD15_RS07910 PF02615 Malate/L-lactate dehydrogenase RD15_RS07915 PF03466 LysR substrate binding domain RD15_RS07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS07925 PF01266 FAD dependent oxidoreductase RD15_RS07930 PF04267 Sarcosine oxidase, delta subunit family RD15_RS07935 PF08669 Glycine cleavage T-protein C-terminal barrel domain RD15_RS07935 PF17806 Sarcosine oxidase A3 domain RD15_RS07935 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS07935 PF01571 Aminomethyltransferase folate-binding domain RD15_RS07945 PF00551 Formyl transferase RD15_RS07950 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS07960 PF00561 alpha/beta hydrolase fold RD15_RS07970 PF01565 FAD binding domain RD15_RS07970 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RD15_RS07975 PF01113 Dihydrodipicolinate reductase, N-terminus RD15_RS07975 PF05173 Dihydrodipicolinate reductase, C-terminus RD15_RS07980 PF04355 SmpA / OmlA family RD15_RS07985 PF01475 Ferric uptake regulator family RD15_RS07990 PF02463 RecF/RecN/SMC N terminal domain RD15_RS07995 PF01513 ATP-NAD kinase RD15_RS08000 PF01628 HrcA protein C terminal domain RD15_RS08000 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RD15_RS08005 PF00762 Ferrochelatase RD15_RS08015 PF01025 GrpE RD15_RS08025 PF00012 Hsp70 protein RD15_RS08030 PF00226 DnaJ domain RD15_RS08030 PF01556 DnaJ C terminal domain RD15_RS08030 PF00684 DnaJ central domain RD15_RS08035 PF00675 Insulinase (Peptidase family M16) RD15_RS08035 PF05193 Peptidase M16 inactive domain RD15_RS08055 PF00004 ATPase family associated with various cellular activities (AAA) RD15_RS08055 PF17862 AAA+ lid domain RD15_RS08055 PF01434 Peptidase family M41 RD15_RS08065 PF00034 Cytochrome c RD15_RS08080 PF00180 Isocitrate/isopropylmalate dehydrogenase RD15_RS08100 PF00072 Response regulator receiver domain RD15_RS08100 PF00486 Transcriptional regulatory protein, C terminal RD15_RS08105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS08105 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS08105 PF02702 Osmosensitive K+ channel His kinase sensor domain RD15_RS08105 PF13492 GAF domain RD15_RS08105 PF13493 Domain of unknown function (DUF4118) RD15_RS08110 PF02669 K+-transporting ATPase, c chain RD15_RS08120 PF03814 Potassium-transporting ATPase A subunit RD15_RS08130 PF00474 Sodium:solute symporter family RD15_RS08140 PF00893 Small Multidrug Resistance protein RD15_RS08145 PF01713 Smr domain RD15_RS08145 PF00488 MutS domain V RD15_RS08150 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS08155 PF01580 FtsK/SpoIIIE family RD15_RS08155 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RD15_RS08155 PF09397 Ftsk gamma domain RD15_RS08155 PF17854 FtsK alpha domain RD15_RS08160 PF03548 Outer membrane lipoprotein carrier protein LolA RD15_RS08165 PF12002 MgsA AAA+ ATPase C terminal RD15_RS08165 PF16193 AAA C-terminal domain RD15_RS08165 PF00004 ATPase family associated with various cellular activities (AAA) RD15_RS08170 PF02403 Seryl-tRNA synthetase N-terminal domain RD15_RS08170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD15_RS08195 PF00990 Diguanylate cyclase, GGDEF domain RD15_RS08195 PF17151 Periplasmic sensor domain RD15_RS08210 PF07660 Secretin and TonB N terminus short domain RD15_RS08210 PF07715 TonB-dependent Receptor Plug Domain RD15_RS08210 PF00593 TonB dependent receptor RD15_RS08215 PF07690 Major Facilitator Superfamily RD15_RS08235 PF04183 IucA / IucC family RD15_RS08235 PF06276 Ferric iron reductase FhuF-like transporter RD15_RS08245 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RD15_RS08255 PF00999 Sodium/hydrogen exchanger family RD15_RS08255 PF02254 TrkA-N domain RD15_RS08260 PF00106 short chain dehydrogenase RD15_RS08270 PF03883 Peroxide stress protein YaaA RD15_RS08280 PF12805 FUSC-like inner membrane protein yccS RD15_RS08285 PF01510 N-acetylmuramoyl-L-alanine amidase RD15_RS08295 PF02545 Maf-like protein RD15_RS08300 PF02620 Large ribosomal RNA subunit accumulation protein YceD RD15_RS08305 PF01783 Ribosomal L32p protein family RD15_RS08310 PF02504 Fatty acid synthesis protein RD15_RS08315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RD15_RS08315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RD15_RS08320 PF00698 Acyl transferase domain RD15_RS08330 PF00550 Phosphopantetheine attachment site RD15_RS08335 PF00109 Beta-ketoacyl synthase, N-terminal domain RD15_RS08335 PF02801 Beta-ketoacyl synthase, C-terminal domain RD15_RS08345 PF04542 Sigma-70 region 2 RD15_RS08345 PF08281 Sigma-70, region 4 RD15_RS08360 PF13180 PDZ domain RD15_RS08365 PF00009 Elongation factor Tu GTP binding domain RD15_RS08365 PF00679 Elongation factor G C-terminus RD15_RS08365 PF06421 GTP-binding protein LepA C-terminus RD15_RS08365 PF03144 Elongation factor Tu domain 2 RD15_RS08370 PF10502 Signal peptidase, peptidase S26 RD15_RS08375 PF00035 Double-stranded RNA binding motif RD15_RS08375 PF14622 Ribonuclease-III-like RD15_RS08380 PF01926 50S ribosome-binding GTPase RD15_RS08380 PF07650 KH domain RD15_RS08385 PF02565 Recombination protein O C terminal RD15_RS08385 PF11967 Recombination protein O N terminal RD15_RS08395 PF00291 Pyridoxal-phosphate dependent enzyme RD15_RS08410 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS08415 PF01027 Inhibitor of apoptosis-promoting Bax1 RD15_RS08425 PF04364 DNA polymerase III chi subunit, HolC RD15_RS08430 PF00883 Cytosol aminopeptidase family, catalytic domain RD15_RS08430 PF02789 Cytosol aminopeptidase family, N-terminal domain RD15_RS08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS08440 PF03466 LysR substrate binding domain RD15_RS08450 PF00171 Aldehyde dehydrogenase family RD15_RS08455 PF03466 LysR substrate binding domain RD15_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS08470 PF00877 NlpC/P60 family RD15_RS08475 PF00501 AMP-binding enzyme RD15_RS08475 PF13193 AMP-binding enzyme C-terminal domain RD15_RS08475 PF16177 Acetyl-coenzyme A synthetase N-terminus RD15_RS08480 PF03928 Haem-degrading RD15_RS08490 PF13193 AMP-binding enzyme C-terminal domain RD15_RS08490 PF00501 AMP-binding enzyme RD15_RS08490 PF16177 Acetyl-coenzyme A synthetase N-terminus RD15_RS08495 PF00892 EamA-like transporter family RD15_RS08500 PF01212 Beta-eliminating lyase RD15_RS08515 PF16363 GDP-mannose 4,6 dehydratase RD15_RS08535 PF01144 Coenzyme A transferase RD15_RS08545 PF01112 Asparaginase RD15_RS08550 PF00005 ABC transporter RD15_RS08550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS08555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS08560 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS08565 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS08565 PF12911 N-terminal TM domain of oligopeptide transport permease C RD15_RS08570 PF03576 Peptidase family S58 RD15_RS08580 PF00557 Metallopeptidase family M24 RD15_RS08580 PF01321 Creatinase/Prolidase N-terminal domain RD15_RS08590 PF06418 CTP synthase N-terminus RD15_RS08590 PF00117 Glutamine amidotransferase class-I RD15_RS08595 PF00793 DAHP synthetase I family RD15_RS08605 PF03952 Enolase, N-terminal domain RD15_RS08605 PF00113 Enolase, C-terminal TIM barrel domain RD15_RS08610 PF04977 Septum formation initiator RD15_RS08615 PF00211 Adenylate and Guanylate cyclase catalytic domain RD15_RS08640 PF01430 Hsp33 protein RD15_RS08650 PF13193 AMP-binding enzyme C-terminal domain RD15_RS08650 PF16177 Acetyl-coenzyme A synthetase N-terminus RD15_RS08650 PF00501 AMP-binding enzyme RD15_RS08670 PF01170 Putative RNA methylase family UPF0020 RD15_RS08670 PF02926 THUMP domain RD15_RS08675 PF03653 Uncharacterised protein family (UPF0093) RD15_RS08680 PF03972 MmgE/PrpD family RD15_RS08685 PF04303 PrpF protein RD15_RS08690 PF00694 Aconitase C-terminal domain RD15_RS08690 PF00330 Aconitase family (aconitate hydratase) RD15_RS08695 PF00285 Citrate synthase, C-terminal domain RD15_RS08705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RD15_RS08705 PF00056 lactate/malate dehydrogenase, NAD binding domain RD15_RS08710 PF07702 UTRA domain RD15_RS08710 PF00392 Bacterial regulatory proteins, gntR family RD15_RS08715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD15_RS08720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RD15_RS08725 PF00890 FAD binding domain RD15_RS08725 PF02910 Fumarate reductase flavoprotein C-term RD15_RS08730 PF13085 2Fe-2S iron-sulfur cluster binding domain RD15_RS08735 PF03937 Flavinator of succinate dehydrogenase RD15_RS08740 PF00285 Citrate synthase, C-terminal domain RD15_RS08760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS08760 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD15_RS08770 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS08790 PF13416 Bacterial extracellular solute-binding protein RD15_RS08795 PF00005 ABC transporter RD15_RS08795 PF08402 TOBE domain RD15_RS08800 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS08805 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS08815 PF02245 Methylpurine-DNA glycosylase (MPG) RD15_RS08825 PF02646 RmuC family RD15_RS08830 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS08830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS08830 PF18158 Adaptive response protein AidB N-terminal domain RD15_RS08835 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RD15_RS08840 PF01895 PhoU domain RD15_RS08845 PF05506 Domain of unknown function (DUF756) RD15_RS08845 PF04185 Phosphoesterase family RD15_RS08850 PF04362 Bacterial Fe(2+) trafficking RD15_RS08855 PF00583 Acetyltransferase (GNAT) family RD15_RS08855 PF00696 Amino acid kinase family RD15_RS08860 PF04408 Helicase associated domain (HA2) RD15_RS08860 PF11898 Domain of unknown function (DUF3418) RD15_RS08860 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RD15_RS08860 PF00271 Helicase conserved C-terminal domain RD15_RS08860 PF00270 DEAD/DEAH box helicase RD15_RS08870 PF01336 OB-fold nucleic acid binding domain RD15_RS08870 PF02811 PHP domain RD15_RS08870 PF14579 Helix-hairpin-helix motif RD15_RS08870 PF07733 Bacterial DNA polymerase III alpha NTPase domain RD15_RS08870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RD15_RS08875 PF13439 Glycosyltransferase Family 4 RD15_RS08875 PF00534 Glycosyl transferases group 1 RD15_RS08880 PF01522 Polysaccharide deacetylase RD15_RS08885 PF00535 Glycosyl transferase family 2 RD15_RS08890 PF00534 Glycosyl transferases group 1 RD15_RS08890 PF13439 Glycosyltransferase Family 4 RD15_RS08895 PF00884 Sulfatase RD15_RS08910 PF03692 Putative zinc- or iron-chelating domain RD15_RS08920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RD15_RS08925 PF00664 ABC transporter transmembrane region RD15_RS08925 PF00005 ABC transporter RD15_RS08930 PF07690 Major Facilitator Superfamily RD15_RS08940 PF00800 Prephenate dehydratase RD15_RS08940 PF01842 ACT domain RD15_RS08945 PF00575 S1 RNA binding domain RD15_RS08945 PF10150 Ribonuclease E/G family RD15_RS08985 PF03797 Autotransporter beta-domain RD15_RS08985 PF03212 Pertactin RD15_RS08990 PF02545 Maf-like protein RD15_RS08995 PF02590 Predicted SPOUT methyltransferase RD15_RS09005 PF01467 Cytidylyltransferase-like RD15_RS09010 PF01218 Coproporphyrinogen III oxidase RD15_RS09015 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RD15_RS09015 PF02843 Phosphoribosylglycinamide synthetase, C domain RD15_RS09015 PF02844 Phosphoribosylglycinamide synthetase, N domain RD15_RS09020 PF01709 Transcriptional regulator RD15_RS09025 PF05872 Bacterial protein of unknown function (DUF853) RD15_RS09030 PF01235 Sodium:alanine symporter family RD15_RS09035 PF00202 Aminotransferase class-III RD15_RS09040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD15_RS09045 PF00171 Aldehyde dehydrogenase family RD15_RS09055 PF01546 Peptidase family M20/M25/M40 RD15_RS09055 PF07687 Peptidase dimerisation domain RD15_RS09060 PF00850 Histone deacetylase domain RD15_RS09065 PF07883 Cupin domain RD15_RS09070 PF00202 Aminotransferase class-III RD15_RS09080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS09080 PF00005 ABC transporter RD15_RS09085 PF12911 N-terminal TM domain of oligopeptide transport permease C RD15_RS09085 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS09090 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS09095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS09100 PF00155 Aminotransferase class I and II RD15_RS09100 PF00392 Bacterial regulatory proteins, gntR family RD15_RS09105 PF00180 Isocitrate/isopropylmalate dehydrogenase RD15_RS09110 PF07690 Major Facilitator Superfamily RD15_RS09115 PF00529 HlyD membrane-fusion protein of T1SS RD15_RS09115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD15_RS09125 PF01047 MarR family RD15_RS09135 PF00892 EamA-like transporter family RD15_RS09140 PF08240 Alcohol dehydrogenase GroES-like domain RD15_RS09140 PF00107 Zinc-binding dehydrogenase RD15_RS09145 PF01435 Peptidase family M48 RD15_RS09155 PF00581 Rhodanese-like domain RD15_RS09165 PF03466 LysR substrate binding domain RD15_RS09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS09170 PF00005 ABC transporter RD15_RS09170 PF08402 TOBE domain RD15_RS09175 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS09180 PF13419 Haloacid dehalogenase-like hydrolase RD15_RS09190 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS09210 PF00860 Permease family RD15_RS09215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD15_RS09215 PF02203 Tar ligand binding domain homologue RD15_RS09215 PF00672 HAMP domain RD15_RS09220 PF01272 Transcription elongation factor, GreA/GreB, C-term RD15_RS09220 PF03449 Transcription elongation factor, N-terminal RD15_RS09250 PF00771 FHIPEP family RD15_RS09315 PF01514 Secretory protein of YscJ/FliF family RD15_RS09325 PF02108 Flagellar assembly protein FliH RD15_RS09330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD15_RS09330 PF18269 T3SS EscN ATPase C-terminal domain RD15_RS09330 PF02874 ATP synthase alpha/beta family, beta-barrel domain RD15_RS09345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD15_RS09350 PF00813 FliP family RD15_RS09355 PF01313 Bacterial export proteins, family 3 RD15_RS09360 PF01311 Bacterial export proteins, family 1 RD15_RS09365 PF01312 FlhB HrpN YscU SpaS Family RD15_RS09375 PF00263 Bacterial type II and III secretion system protein RD15_RS09375 PF03958 Bacterial type II/III secretion system short domain RD15_RS09380 PF04542 Sigma-70 region 2 RD15_RS09380 PF08281 Sigma-70, region 4 RD15_RS09405 PF00672 HAMP domain RD15_RS09405 PF07228 Stage II sporulation protein E (SpoIIE) RD15_RS09415 PF01168 Alanine racemase, N-terminal domain RD15_RS09415 PF00842 Alanine racemase, C-terminal domain RD15_RS09420 PF13581 Histidine kinase-like ATPase domain RD15_RS09425 PF01740 STAS domain RD15_RS09430 PF13091 PLD-like domain RD15_RS09430 PF13396 Phospholipase_D-nuclease N-terminal RD15_RS09440 PF03797 Autotransporter beta-domain RD15_RS09460 PF16868 NMT1-like family RD15_RS09465 PF00202 Aminotransferase class-III RD15_RS09475 PF12802 MarR family RD15_RS09480 PF00583 Acetyltransferase (GNAT) family RD15_RS09495 PF00970 Oxidoreductase FAD-binding domain RD15_RS09495 PF00042 Globin RD15_RS09495 PF00175 Oxidoreductase NAD-binding domain RD15_RS09500 PF02082 Transcriptional regulator RD15_RS09505 PF01266 FAD dependent oxidoreductase RD15_RS09525 PF01571 Aminomethyltransferase folate-binding domain RD15_RS09530 PF02618 YceG-like family RD15_RS09535 PF02223 Thymidylate kinase RD15_RS09540 PF12169 DNA polymerase III subunits gamma and tau domain III RD15_RS09545 PF01026 TatD related DNase RD15_RS09560 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS09570 PF00005 ABC transporter RD15_RS09575 PF00491 Arginase family RD15_RS09580 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RD15_RS09580 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RD15_RS09585 PF00171 Aldehyde dehydrogenase family RD15_RS09590 PF01546 Peptidase family M20/M25/M40 RD15_RS09590 PF07687 Peptidase dimerisation domain RD15_RS09595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS09595 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS09595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS09605 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD15_RS09605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS09615 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS09615 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD15_RS09620 PF07729 FCD domain RD15_RS09620 PF00392 Bacterial regulatory proteins, gntR family RD15_RS09630 PF04343 Protein of unknown function, DUF488 RD15_RS09650 PF01425 Amidase RD15_RS09655 PF07286 Protein of unknown function (DUF1445) RD15_RS09665 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS09665 PF00989 PAS fold RD15_RS09665 PF01627 Hpt domain RD15_RS09665 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS09665 PF00072 Response regulator receiver domain RD15_RS09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS09670 PF00072 Response regulator receiver domain RD15_RS09670 PF00196 Bacterial regulatory proteins, luxR family RD15_RS09675 PF05594 Haemagluttinin repeat RD15_RS09675 PF13018 Extended Signal Peptide of Type V secretion system RD15_RS09675 PF05860 haemagglutination activity domain RD15_RS09675 PF13332 Hemagglutinin repeat RD15_RS09680 PF16970 Type-1 fimbrial protein, A RD15_RS09685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RD15_RS09685 PF02753 Pili assembly chaperone PapD, C-terminal domain RD15_RS09690 PF13953 PapC C-terminal domain RD15_RS09690 PF13954 PapC N-terminal domain RD15_RS09690 PF00577 Outer membrane usher protein RD15_RS09695 PF00419 Fimbrial protein RD15_RS09700 PF17287 POTRA domain RD15_RS09700 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RD15_RS09700 PF08479 POTRA domain, ShlB-type RD15_RS09715 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS09740 PF03466 LysR substrate binding domain RD15_RS09740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS09750 PF05378 Hydantoinase/oxoprolinase N-terminal region RD15_RS09750 PF01968 Hydantoinase/oxoprolinase RD15_RS09765 PF05552 Conserved TM helix RD15_RS09765 PF00924 Mechanosensitive ion channel RD15_RS09775 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS09780 PF00588 SpoU rRNA Methylase family RD15_RS09785 PF00459 Inositol monophosphatase family RD15_RS09790 PF03741 Integral membrane protein TerC family RD15_RS09790 PF03471 Transporter associated domain RD15_RS09795 PF02673 Bacitracin resistance protein BacA RD15_RS09800 PF00149 Calcineurin-like phosphoesterase RD15_RS09805 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RD15_RS09815 PF09190 DALR domain RD15_RS09815 PF01406 tRNA synthetases class I (C) catalytic domain RD15_RS09820 PF06029 AlkA N-terminal domain RD15_RS09820 PF12833 Helix-turn-helix domain RD15_RS09820 PF00730 HhH-GPD superfamily base excision DNA repair protein RD15_RS09820 PF02805 Metal binding domain of Ada RD15_RS09825 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RD15_RS09835 PF01171 PP-loop family RD15_RS09835 PF09179 TilS substrate binding domain RD15_RS09840 PF01842 ACT domain RD15_RS09840 PF00696 Amino acid kinase family RD15_RS09840 PF13840 ACT domain RD15_RS09865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD15_RS09865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD15_RS09870 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RD15_RS09870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS09875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS09880 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS09885 PF00561 alpha/beta hydrolase fold RD15_RS09890 PF03447 Homoserine dehydrogenase, NAD binding domain RD15_RS09890 PF01958 Domain of unknown function DUF108 RD15_RS09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS09905 PF03466 LysR substrate binding domain RD15_RS09925 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS09930 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS09935 PF08402 TOBE domain RD15_RS09935 PF00005 ABC transporter RD15_RS09945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD15_RS09945 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS09950 PF01614 Bacterial transcriptional regulator RD15_RS09950 PF09339 IclR helix-turn-helix domain RD15_RS09955 PF13380 CoA binding domain RD15_RS09960 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS09965 PF01042 Endoribonuclease L-PSP RD15_RS09990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RD15_RS10000 PF00535 Glycosyl transferase family 2 RD15_RS10005 PF14883 Hypothetical glycosyl hydrolase family 13 RD15_RS10005 PF01522 Polysaccharide deacetylase RD15_RS10025 PF12802 MarR family RD15_RS10035 PF13458 Periplasmic binding protein RD15_RS10045 PF00005 ABC transporter RD15_RS10045 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS10050 PF00005 ABC transporter RD15_RS10055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD15_RS10055 PF00034 Cytochrome c RD15_RS10055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD15_RS10060 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS10060 PF01799 [2Fe-2S] binding domain RD15_RS10065 PF01494 FAD binding domain RD15_RS10070 PF17645 Arylmalonate decarboxylase RD15_RS10075 PF00561 alpha/beta hydrolase fold RD15_RS10085 PF00857 Isochorismatase family RD15_RS10100 PF00970 Oxidoreductase FAD-binding domain RD15_RS10100 PF00042 Globin RD15_RS10100 PF00175 Oxidoreductase NAD-binding domain RD15_RS10105 PF00593 TonB dependent receptor RD15_RS10105 PF07715 TonB-dependent Receptor Plug Domain RD15_RS10115 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS10135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD15_RS10135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD15_RS10135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD15_RS10135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD15_RS10140 PF00342 Phosphoglucose isomerase RD15_RS10145 PF00132 Bacterial transferase hexapeptide (six repeats) RD15_RS10155 PF02146 Sir2 family RD15_RS10160 PF00459 Inositol monophosphatase family RD15_RS10165 PF00171 Aldehyde dehydrogenase family RD15_RS10170 PF00202 Aminotransferase class-III RD15_RS10175 PF00155 Aminotransferase class I and II RD15_RS10175 PF00392 Bacterial regulatory proteins, gntR family RD15_RS10185 PF00580 UvrD/REP helicase N-terminal domain RD15_RS10185 PF13361 UvrD-like helicase C-terminal domain RD15_RS10190 PF01544 CorA-like Mg2+ transporter protein RD15_RS10200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS10205 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS10210 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS10210 PF12911 N-terminal TM domain of oligopeptide transport permease C RD15_RS10215 PF00005 ABC transporter RD15_RS10215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS10220 PF01047 MarR family RD15_RS10230 PF08479 POTRA domain, ShlB-type RD15_RS10230 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RD15_RS10235 PF00990 Diguanylate cyclase, GGDEF domain RD15_RS10235 PF00563 EAL domain RD15_RS10235 PF03707 Bacterial signalling protein N terminal repeat RD15_RS10265 PF04972 BON domain RD15_RS10265 PF00263 Bacterial type II and III secretion system protein RD15_RS10265 PF13629 Pilus formation protein N terminal region RD15_RS10275 PF00437 Type II/IV secretion system protein RD15_RS10305 PF02954 Bacterial regulatory protein, Fis family RD15_RS10305 PF00072 Response regulator receiver domain RD15_RS10305 PF00158 Sigma-54 interaction domain RD15_RS10320 PF04542 Sigma-70 region 2 RD15_RS10320 PF08281 Sigma-70, region 4 RD15_RS10330 PF00034 Cytochrome c RD15_RS10335 PF08207 Elongation factor P (EF-P) KOW-like domain RD15_RS10335 PF01132 Elongation factor P (EF-P) OB domain RD15_RS10335 PF09285 Elongation factor P, C-terminal RD15_RS10350 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RD15_RS10355 PF00330 Aconitase family (aconitate hydratase) RD15_RS10355 PF00694 Aconitase C-terminal domain RD15_RS10365 PF00593 TonB dependent receptor RD15_RS10365 PF07715 TonB-dependent Receptor Plug Domain RD15_RS10380 PF00691 OmpA family RD15_RS10390 PF11791 Aconitate B N-terminal domain RD15_RS10390 PF00330 Aconitase family (aconitate hydratase) RD15_RS10390 PF06434 Aconitate hydratase 2 N-terminus RD15_RS10415 PF00892 EamA-like transporter family RD15_RS10420 PF01925 Sulfite exporter TauE/SafE RD15_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS10435 PF03466 LysR substrate binding domain RD15_RS10440 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RD15_RS10440 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RD15_RS10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS10450 PF03466 LysR substrate binding domain RD15_RS10495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RD15_RS10495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RD15_RS10500 PF01425 Amidase RD15_RS10510 PF00171 Aldehyde dehydrogenase family RD15_RS10525 PF08264 Anticodon-binding domain of tRNA RD15_RS10525 PF13603 Leucyl-tRNA synthetase, Domain 2 RD15_RS10525 PF09334 tRNA synthetases class I (M) RD15_RS10525 PF00133 tRNA synthetases class I (I, L, M and V) RD15_RS10530 PF07690 Major Facilitator Superfamily RD15_RS10535 PF01047 MarR family RD15_RS10550 PF01740 STAS domain RD15_RS10550 PF00916 Sulfate permease family RD15_RS10555 PF00471 Ribosomal protein L33 RD15_RS10560 PF00830 Ribosomal L28 family RD15_RS10565 PF07690 Major Facilitator Superfamily RD15_RS10585 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS10590 PF00005 ABC transporter RD15_RS10590 PF00571 CBS domain RD15_RS10595 PF01361 Tautomerase enzyme RD15_RS10600 PF02803 Thiolase, C-terminal domain RD15_RS10600 PF00108 Thiolase, N-terminal domain RD15_RS10610 PF00392 Bacterial regulatory proteins, gntR family RD15_RS10610 PF07729 FCD domain RD15_RS10620 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS10630 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS10635 PF00080 Copper/zinc superoxide dismutase (SODC) RD15_RS10650 PF00005 ABC transporter RD15_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS10655 PF03459 TOBE domain RD15_RS10675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD15_RS10675 PF00529 HlyD membrane-fusion protein of T1SS RD15_RS10680 PF00873 AcrB/AcrD/AcrF family RD15_RS10685 PF02321 Outer membrane efflux protein RD15_RS10685 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RD15_RS10690 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RD15_RS10695 PF01648 4'-phosphopantetheinyl transferase superfamily RD15_RS10700 PF00933 Glycosyl hydrolase family 3 N terminal domain RD15_RS10705 PF01541 GIY-YIG catalytic domain RD15_RS10705 PF08459 UvrC Helix-hairpin-helix N-terminal RD15_RS10705 PF02151 UvrB/uvrC motif RD15_RS10710 PF01066 CDP-alcohol phosphatidyltransferase RD15_RS10725 PF14489 QueF-like protein RD15_RS10725 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RD15_RS10730 PF00463 Isocitrate lyase family RD15_RS10745 PF02653 Branched-chain amino acid transport system / permease component RD15_RS10745 PF11862 Domain of unknown function (DUF3382) RD15_RS10750 PF02653 Branched-chain amino acid transport system / permease component RD15_RS10755 PF13458 Periplasmic binding protein RD15_RS10760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RD15_RS10760 PF00355 Rieske [2Fe-2S] domain RD15_RS10765 PF00866 Ring hydroxylating beta subunit RD15_RS10770 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS10780 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS10785 PF02515 CoA-transferase family III RD15_RS10790 PF07859 alpha/beta hydrolase fold RD15_RS10795 PF00501 AMP-binding enzyme RD15_RS10795 PF14535 AMP-binding enzyme C-terminal domain RD15_RS10800 PF02803 Thiolase, C-terminal domain RD15_RS10800 PF00108 Thiolase, N-terminal domain RD15_RS10810 PF12228 Protein of unknown function (DUF3604) RD15_RS10815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS10815 PF03466 LysR substrate binding domain RD15_RS10820 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS10840 PF01152 Bacterial-like globin RD15_RS10875 PF01425 Amidase RD15_RS10880 PF01425 Amidase RD15_RS10890 PF01522 Polysaccharide deacetylase RD15_RS10895 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS10915 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS10915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD15_RS10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS10940 PF03466 LysR substrate binding domain RD15_RS10950 PF01799 [2Fe-2S] binding domain RD15_RS10950 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS10955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RD15_RS10965 PF12833 Helix-turn-helix domain RD15_RS10965 PF06719 AraC-type transcriptional regulator N-terminus RD15_RS10985 PF07690 Major Facilitator Superfamily RD15_RS11000 PF00583 Acetyltransferase (GNAT) family RD15_RS11010 PF00664 ABC transporter transmembrane region RD15_RS11010 PF00005 ABC transporter RD15_RS11020 PF02535 ZIP Zinc transporter RD15_RS11035 PF00916 Sulfate permease family RD15_RS11035 PF01740 STAS domain RD15_RS11055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RD15_RS11055 PF03625 Domain of unknown function DUF302 RD15_RS11065 PF12833 Helix-turn-helix domain RD15_RS11065 PF02805 Metal binding domain of Ada RD15_RS11070 PF07237 Protein of unknown function (DUF1428) RD15_RS11075 PF02567 Phenazine biosynthesis-like protein RD15_RS11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS11080 PF03466 LysR substrate binding domain RD15_RS11085 PF04286 Protein of unknown function (DUF445) RD15_RS11100 PF00171 Aldehyde dehydrogenase family RD15_RS11105 PF02954 Bacterial regulatory protein, Fis family RD15_RS11105 PF00158 Sigma-54 interaction domain RD15_RS11105 PF01590 GAF domain RD15_RS11115 PF04172 LrgB-like family RD15_RS11120 PF03788 LrgA family RD15_RS11125 PF13649 Methyltransferase domain RD15_RS11135 PF00155 Aminotransferase class I and II RD15_RS11140 PF00202 Aminotransferase class-III RD15_RS11175 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RD15_RS11175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD15_RS11180 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RD15_RS11180 PF12801 4Fe-4S binding domain RD15_RS11180 PF13746 4Fe-4S dicluster domain RD15_RS11205 PF00005 ABC transporter RD15_RS11210 PF01061 ABC-2 type transporter RD15_RS11215 PF01594 AI-2E family transporter RD15_RS11240 PF04539 Sigma-70 region 3 RD15_RS11240 PF04545 Sigma-70, region 4 RD15_RS11240 PF04542 Sigma-70 region 2 RD15_RS11240 PF00140 Sigma-70 factor, region 1.2 RD15_RS11240 PF04546 Sigma-70, non-essential region RD15_RS11240 PF03979 Sigma-70 factor, region 1.1 RD15_RS11245 PF01807 CHC2 zinc finger RD15_RS11245 PF08275 DNA primase catalytic core, N-terminal domain RD15_RS11245 PF08278 DNA primase DnaG DnaB-binding RD15_RS11245 PF10410 DnaB-helicase binding domain of primase RD15_RS11250 PF01165 Ribosomal protein S21 RD15_RS11255 PF00156 Phosphoribosyl transferase domain RD15_RS11260 PF00709 Adenylosuccinate synthetase RD15_RS11265 PF13393 Histidyl-tRNA synthetase RD15_RS11270 PF01145 SPFH domain / Band 7 family RD15_RS11275 PF12221 Bacterial membrane protein N terminal RD15_RS11275 PF01145 SPFH domain / Band 7 family RD15_RS11280 PF16360 GTP-binding GTPase Middle Region RD15_RS11280 PF01926 50S ribosome-binding GTPase RD15_RS11280 PF13167 GTP-binding GTPase N-terminal RD15_RS11285 PF17209 Hfq protein RD15_RS11290 PF00155 Aminotransferase class I and II RD15_RS11295 PF01926 50S ribosome-binding GTPase RD15_RS11295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RD15_RS11300 PF13360 PQQ-like domain RD15_RS11305 PF09976 Tetratricopeptide repeat-like domain RD15_RS11310 PF13393 Histidyl-tRNA synthetase RD15_RS11310 PF03129 Anticodon binding domain RD15_RS11315 PF04551 GcpE protein RD15_RS11325 PF04055 Radical SAM superfamily RD15_RS11330 PF00334 Nucleoside diphosphate kinase RD15_RS11335 PF10458 Valyl tRNA synthetase tRNA binding arm RD15_RS11335 PF00133 tRNA synthetases class I (I, L, M and V) RD15_RS11335 PF08264 Anticodon-binding domain of tRNA RD15_RS11345 PF00486 Transcriptional regulatory protein, C terminal RD15_RS11345 PF00072 Response regulator receiver domain RD15_RS11350 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS11350 PF08521 Two-component sensor kinase N-terminal RD15_RS11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS11370 PF00266 Aminotransferase class-V RD15_RS11375 PF01746 tRNA (Guanine-1)-methyltransferase RD15_RS11380 PF01782 RimM N-terminal domain RD15_RS11385 PF00886 Ribosomal protein S16 RD15_RS11395 PF01206 Sulfurtransferase TusA RD15_RS11400 PF02272 DHHA1 domain RD15_RS11400 PF01411 tRNA synthetases class II (A) RD15_RS11400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD15_RS11445 PF01425 Amidase RD15_RS11450 PF00005 ABC transporter RD15_RS11450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS11455 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS11460 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS11465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS11480 PF03466 LysR substrate binding domain RD15_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS11485 PF13416 Bacterial extracellular solute-binding protein RD15_RS11490 PF01266 FAD dependent oxidoreductase RD15_RS11495 PF00175 Oxidoreductase NAD-binding domain RD15_RS11495 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS11495 PF00970 Oxidoreductase FAD-binding domain RD15_RS11500 PF02261 Aspartate decarboxylase RD15_RS11515 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RD15_RS11520 PF17042 Nucleotide-binding C-terminal domain RD15_RS11520 PF07005 Sugar-binding N-terminal domain RD15_RS11525 PF03812 2-keto-3-deoxygluconate permease RD15_RS11535 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS11545 PF02142 MGS-like domain RD15_RS11550 PF04384 Iron-sulphur cluster assembly RD15_RS11555 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS11560 PF00012 Hsp70 protein RD15_RS11565 PF07743 HSCB C-terminal oligomerisation domain RD15_RS11570 PF01521 Iron-sulphur cluster biosynthesis RD15_RS11575 PF01592 NifU-like N terminal domain RD15_RS11580 PF00266 Aminotransferase class-V RD15_RS11585 PF02082 Transcriptional regulator RD15_RS11590 PF01451 Low molecular weight phosphotyrosine protein phosphatase RD15_RS11595 PF12344 Ultra-violet resistance protein B RD15_RS11595 PF02151 UvrB/uvrC motif RD15_RS11595 PF04851 Type III restriction enzyme, res subunit RD15_RS11595 PF00271 Helicase conserved C-terminal domain RD15_RS11595 PF17757 UvrB interaction domain RD15_RS11600 PF00155 Aminotransferase class I and II RD15_RS11605 PF01726 LexA DNA binding domain RD15_RS11605 PF00717 Peptidase S24-like RD15_RS11610 PF03797 Autotransporter beta-domain RD15_RS11610 PF03212 Pertactin RD15_RS11635 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS11640 PF01144 Coenzyme A transferase RD15_RS11645 PF01144 Coenzyme A transferase RD15_RS11655 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS11655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS11655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS11665 PF00108 Thiolase, N-terminal domain RD15_RS11665 PF02803 Thiolase, C-terminal domain RD15_RS11675 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS11680 PF01575 MaoC like domain RD15_RS11685 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS11690 PF02515 CoA-transferase family III RD15_RS11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS11695 PF03466 LysR substrate binding domain RD15_RS11700 PF02190 ATP-dependent protease La (LON) substrate-binding domain RD15_RS11700 PF05362 Lon protease (S16) C-terminal proteolytic domain RD15_RS11700 PF00004 ATPase family associated with various cellular activities (AAA) RD15_RS11705 PF06689 ClpX C4-type zinc finger RD15_RS11705 PF10431 C-terminal, D2-small domain, of ClpB protein RD15_RS11705 PF07724 AAA domain (Cdc48 subfamily) RD15_RS11710 PF00574 Clp protease RD15_RS11715 PF05697 Bacterial trigger factor protein (TF) RD15_RS11715 PF05698 Bacterial trigger factor protein (TF) C-terminus RD15_RS11715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD15_RS11720 PF03350 Uncharacterized protein family, UPF0114 RD15_RS11725 PF00313 'Cold-shock' DNA-binding domain RD15_RS11735 PF00313 'Cold-shock' DNA-binding domain RD15_RS11770 PF14602 Hexapeptide repeat of succinyl-transferase RD15_RS11770 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RD15_RS11770 PF00132 Bacterial transferase hexapeptide (six repeats) RD15_RS11775 PF07687 Peptidase dimerisation domain RD15_RS11775 PF01546 Peptidase family M20/M25/M40 RD15_RS11780 PF05175 Methyltransferase small domain RD15_RS11785 PF12848 ABC transporter RD15_RS11785 PF00005 ABC transporter RD15_RS11790 PF07715 TonB-dependent Receptor Plug Domain RD15_RS11795 PF13361 UvrD-like helicase C-terminal domain RD15_RS11795 PF00580 UvrD/REP helicase N-terminal domain RD15_RS11820 PF01189 16S rRNA methyltransferase RsmB/F RD15_RS11820 PF01029 NusB family RD15_RS11825 PF06574 FAD synthetase RD15_RS11825 PF01687 Riboflavin kinase RD15_RS11830 PF08264 Anticodon-binding domain of tRNA RD15_RS11830 PF06827 Zinc finger found in FPG and IleRS RD15_RS11830 PF00133 tRNA synthetases class I (I, L, M and V) RD15_RS11835 PF01252 Signal peptidase (SPase) II RD15_RS11840 PF04127 DNA / pantothenate metabolism flavoprotein RD15_RS11840 PF02441 Flavoprotein RD15_RS11850 PF01037 Lrp/AsnC ligand binding domain RD15_RS11865 PF13406 Transglycosylase SLT domain RD15_RS11870 PF04305 Protein of unknown function (DUF455) RD15_RS11890 PF08443 RimK-like ATP-grasp domain RD15_RS11890 PF02875 Mur ligase family, glutamate ligase domain RD15_RS11890 PF08245 Mur ligase middle domain RD15_RS11895 PF02875 Mur ligase family, glutamate ligase domain RD15_RS11895 PF08245 Mur ligase middle domain RD15_RS11895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD15_RS11900 PF05532 CsbD-like RD15_RS11910 PF04972 BON domain RD15_RS11920 PF00005 ABC transporter RD15_RS11925 PF13472 GDSL-like Lipase/Acylhydrolase family RD15_RS11930 PF13145 PPIC-type PPIASE domain RD15_RS11935 PF03009 Glycerophosphoryl diester phosphodiesterase family RD15_RS11940 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RD15_RS11945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD15_RS11945 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS11950 PF00462 Glutaredoxin RD15_RS11950 PF08534 Redoxin RD15_RS11960 PF00376 MerR family regulatory protein RD15_RS11960 PF09278 MerR, DNA binding RD15_RS11965 PF05958 tRNA (Uracil-5-)-methyltransferase RD15_RS11985 PF01476 LysM domain RD15_RS11985 PF01551 Peptidase family M23 RD15_RS11995 PF01975 Survival protein SurE RD15_RS12000 PF02660 Glycerol-3-phosphate acyltransferase RD15_RS12010 PF00814 Glycoprotease family RD15_RS12015 PF00860 Permease family RD15_RS12025 PF00085 Thioredoxin RD15_RS12030 PF01205 Uncharacterized protein family UPF0029 RD15_RS12055 PF00005 ABC transporter RD15_RS12060 PF00005 ABC transporter RD15_RS12060 PF12848 ABC transporter RD15_RS12065 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS12075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS12080 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS12085 PF02016 LD-carboxypeptidase N-terminal domain RD15_RS12085 PF17676 LD-carboxypeptidase C-terminal domain RD15_RS12090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RD15_RS12115 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RD15_RS12120 PF01899 Na+/H+ ion antiporter subunit RD15_RS12125 PF00361 Proton-conducting membrane transporter RD15_RS12130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD15_RS12135 PF13244 Domain of unknown function (DUF4040) RD15_RS12135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD15_RS12135 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RD15_RS12135 PF00361 Proton-conducting membrane transporter RD15_RS12140 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS12155 PF03466 LysR substrate binding domain RD15_RS12155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS12165 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS12190 PF03358 NADPH-dependent FMN reductase RD15_RS12215 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS12220 PF03466 LysR substrate binding domain RD15_RS12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS12225 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS12240 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD15_RS12245 PF01070 FMN-dependent dehydrogenase RD15_RS12255 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS12265 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD15_RS12270 PF02798 Glutathione S-transferase, N-terminal domain RD15_RS12270 PF00043 Glutathione S-transferase, C-terminal domain RD15_RS12275 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system RD15_RS12280 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA RD15_RS12285 PF12951 Passenger-associated-transport-repeat RD15_RS12285 PF00082 Subtilase family RD15_RS12285 PF03797 Autotransporter beta-domain RD15_RS12290 PF00072 Response regulator receiver domain RD15_RS12290 PF00196 Bacterial regulatory proteins, luxR family RD15_RS12310 PF00106 short chain dehydrogenase RD15_RS12325 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS12325 PF14759 Reductase C-terminal RD15_RS12335 PF00005 ABC transporter RD15_RS12340 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS12340 PF00005 ABC transporter RD15_RS12345 PF02653 Branched-chain amino acid transport system / permease component RD15_RS12345 PF11862 Domain of unknown function (DUF3382) RD15_RS12355 PF03741 Integral membrane protein TerC family RD15_RS12365 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS12380 PF07726 ATPase family associated with various cellular activities (AAA) RD15_RS12380 PF17863 AAA lid domain RD15_RS12410 PF00884 Sulfatase RD15_RS12425 PF05159 Capsule polysaccharide biosynthesis protein RD15_RS12430 PF05159 Capsule polysaccharide biosynthesis protein RD15_RS12435 PF01370 NAD dependent epimerase/dehydratase family RD15_RS12440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD15_RS12440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD15_RS12440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD15_RS12445 PF02563 Polysaccharide biosynthesis/export protein RD15_RS12455 PF00534 Glycosyl transferases group 1 RD15_RS12465 PF00005 ABC transporter RD15_RS12490 PF00210 Ferritin-like domain RD15_RS12495 PF00171 Aldehyde dehydrogenase family RD15_RS12500 PF03466 LysR substrate binding domain RD15_RS12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS12505 PF03466 LysR substrate binding domain RD15_RS12510 PF17191 RecG wedge domain RD15_RS12510 PF00271 Helicase conserved C-terminal domain RD15_RS12510 PF00270 DEAD/DEAH box helicase RD15_RS12515 PF01042 Endoribonuclease L-PSP RD15_RS12525 PF00248 Aldo/keto reductase family RD15_RS12535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS12535 PF03466 LysR substrate binding domain RD15_RS12540 PF00970 Oxidoreductase FAD-binding domain RD15_RS12540 PF00175 Oxidoreductase NAD-binding domain RD15_RS12550 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS12555 PF00005 ABC transporter RD15_RS12555 PF08402 TOBE domain RD15_RS12565 PF05726 Pirin C-terminal cupin domain RD15_RS12565 PF02678 Pirin RD15_RS12570 PF02678 Pirin RD15_RS12570 PF17954 Quercetinase C-terminal cupin domain RD15_RS12575 PF03466 LysR substrate binding domain RD15_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS12580 PF00072 Response regulator receiver domain RD15_RS12580 PF02954 Bacterial regulatory protein, Fis family RD15_RS12580 PF00158 Sigma-54 interaction domain RD15_RS12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS12585 PF00989 PAS fold RD15_RS12585 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS12590 PF00120 Glutamine synthetase, catalytic domain RD15_RS12590 PF03951 Glutamine synthetase, beta-Grasp domain RD15_RS12595 PF04055 Radical SAM superfamily RD15_RS12595 PF06969 HemN C-terminal domain RD15_RS12605 PF01725 Ham1 family RD15_RS12610 PF00563 EAL domain RD15_RS12610 PF00990 Diguanylate cyclase, GGDEF domain RD15_RS12610 PF17154 Gammaproteobacterial periplasmic sensor domain RD15_RS12610 PF00672 HAMP domain RD15_RS12625 PF03466 LysR substrate binding domain RD15_RS12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS12635 PF01138 3' exoribonuclease family, domain 1 RD15_RS12635 PF03725 3' exoribonuclease family, domain 2 RD15_RS12640 PF08340 Domain of unknown function (DUF1732) RD15_RS12640 PF03755 YicC-like family, N-terminal region RD15_RS12660 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RD15_RS12660 PF01048 Phosphorylase superfamily RD15_RS12665 PF00877 NlpC/P60 family RD15_RS12675 PF00034 Cytochrome c RD15_RS12680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RD15_RS12685 PF00625 Guanylate kinase RD15_RS12690 PF01192 RNA polymerase Rpb6 RD15_RS12695 PF04607 Region found in RelA / SpoT proteins RD15_RS12695 PF02824 TGS domain RD15_RS12695 PF13291 ACT domain RD15_RS12700 PF00005 ABC transporter RD15_RS12705 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS12710 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS12725 PF02163 Peptidase family M50 RD15_RS12730 PF00701 Dihydrodipicolinate synthetase family RD15_RS12735 PF06804 NlpB/DapX lipoprotein RD15_RS12740 PF16970 Type-1 fimbrial protein, A RD15_RS12745 PF08007 Cupin superfamily protein RD15_RS12750 PF01624 MutS domain I RD15_RS12750 PF05188 MutS domain II RD15_RS12750 PF05192 MutS domain III RD15_RS12750 PF05190 MutS family domain IV RD15_RS12750 PF00488 MutS domain V RD15_RS12755 PF07311 Dodecin RD15_RS12760 PF03358 NADPH-dependent FMN reductase RD15_RS12795 PF01300 Telomere recombination RD15_RS12800 PF04228 Putative neutral zinc metallopeptidase RD15_RS12820 PF13662 Toprim domain RD15_RS12820 PF02132 RecR protein RD15_RS12825 PF02575 YbaB/EbfC DNA-binding family RD15_RS12830 PF12170 DNA polymerase III tau subunit V interacting with alpha RD15_RS12830 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RD15_RS12830 PF12169 DNA polymerase III subunits gamma and tau domain III RD15_RS12840 PF13361 UvrD-like helicase C-terminal domain RD15_RS12840 PF12705 PD-(D/E)XK nuclease superfamily RD15_RS12840 PF00580 UvrD/REP helicase N-terminal domain RD15_RS12850 PF07690 Major Facilitator Superfamily RD15_RS12860 PF00768 D-alanyl-D-alanine carboxypeptidase RD15_RS12875 PF01174 SNO glutamine amidotransferase family RD15_RS12880 PF04073 Aminoacyl-tRNA editing domain RD15_RS12885 PF00589 Phage integrase family RD15_RS12885 PF02899 Phage integrase, N-terminal SAM-like domain RD15_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS12890 PF03466 LysR substrate binding domain RD15_RS12895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS12895 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS12895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS12900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS12900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS12900 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS12910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS12910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS12915 PF00005 ABC transporter RD15_RS12920 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS12925 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS12930 PF00491 Arginase family RD15_RS12935 PF01614 Bacterial transcriptional regulator RD15_RS12935 PF09339 IclR helix-turn-helix domain RD15_RS12940 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS12945 PF01300 Telomere recombination RD15_RS12945 PF03481 Putative GTP-binding controlling metal-binding RD15_RS12950 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RD15_RS12950 PF02222 ATP-grasp domain RD15_RS12955 PF00731 AIR carboxylase RD15_RS12960 PF02600 Disulfide bond formation protein DsbB RD15_RS12965 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA RD15_RS12970 PF15723 Motility quorum-sensing regulator, toxin of MqsA RD15_RS12975 PF01259 SAICAR synthetase RD15_RS12985 PF01116 Fructose-bisphosphate aldolase class-II RD15_RS13000 PF03069 Acetamidase/Formamidase family RD15_RS13005 PF02293 AmiS/UreI family transporter RD15_RS13015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD15_RS13015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD15_RS13030 PF00005 ABC transporter RD15_RS13035 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS13040 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS13045 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS13055 PF02423 Ornithine cyclodeaminase/mu-crystallin family RD15_RS13065 PF05524 PEP-utilising enzyme, N-terminal RD15_RS13065 PF00391 PEP-utilising enzyme, mobile domain RD15_RS13065 PF02896 PEP-utilising enzyme, TIM barrel domain RD15_RS13070 PF00381 PTS HPr component phosphorylation site RD15_RS13080 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RD15_RS13080 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RD15_RS13085 PF00707 Translation initiation factor IF-3, C-terminal domain RD15_RS13085 PF05198 Translation initiation factor IF-3, N-terminal domain RD15_RS13090 PF03129 Anticodon binding domain RD15_RS13090 PF02824 TGS domain RD15_RS13090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD15_RS13090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RD15_RS13095 PF00196 Bacterial regulatory proteins, luxR family RD15_RS13105 PF06969 HemN C-terminal domain RD15_RS13105 PF04055 Radical SAM superfamily RD15_RS13115 PF00990 Diguanylate cyclase, GGDEF domain RD15_RS13130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RD15_RS13135 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RD15_RS13145 PF03480 Bacterial extracellular solute-binding protein, family 7 RD15_RS13150 PF01416 tRNA pseudouridine synthase RD15_RS13160 PF01118 Semialdehyde dehydrogenase, NAD binding domain RD15_RS13160 PF02774 Semialdehyde dehydrogenase, dimerisation domain RD15_RS13165 PF00180 Isocitrate/isopropylmalate dehydrogenase RD15_RS13170 PF00694 Aconitase C-terminal domain RD15_RS13175 PF00330 Aconitase family (aconitate hydratase) RD15_RS13180 PF12849 PBP superfamily domain RD15_RS13185 PF00005 ABC transporter RD15_RS13190 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS13215 PF13247 4Fe-4S dicluster domain RD15_RS13220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RD15_RS13220 PF01568 Molydopterin dinucleotide binding domain RD15_RS13220 PF00384 Molybdopterin oxidoreductase RD15_RS13250 PF10609 NUBPL iron-transfer P-loop NTPase RD15_RS13255 PF12804 MobA-like NTP transferase domain RD15_RS13260 PF00994 Probable molybdopterin binding domain RD15_RS13260 PF03453 MoeA N-terminal region (domain I and II) RD15_RS13260 PF03454 MoeA C-terminal region (domain IV) RD15_RS13265 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RD15_RS13270 PF01435 Peptidase family M48 RD15_RS13275 PF01264 Chorismate synthase RD15_RS13280 PF00990 Diguanylate cyclase, GGDEF domain RD15_RS13280 PF08447 PAS fold RD15_RS13280 PF08448 PAS fold RD15_RS13280 PF00563 EAL domain RD15_RS13295 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS13300 PF08402 TOBE domain RD15_RS13300 PF00005 ABC transporter RD15_RS13305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS13305 PF03466 LysR substrate binding domain RD15_RS13310 PF00300 Histidine phosphatase superfamily (branch 1) RD15_RS13320 PF02142 MGS-like domain RD15_RS13320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RD15_RS13320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD15_RS13325 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RD15_RS13325 PF00117 Glutamine amidotransferase class-I RD15_RS13330 PF00923 Transaldolase/Fructose-6-phosphate aldolase RD15_RS13355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD15_RS13355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD15_RS13360 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS13365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS13365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS13365 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS13370 PF03658 RnfH family Ubiquitin RD15_RS13375 PF03364 Polyketide cyclase / dehydrase and lipid transport RD15_RS13380 PF01668 SmpB protein RD15_RS13385 PF00990 Diguanylate cyclase, GGDEF domain RD15_RS13385 PF08448 PAS fold RD15_RS13390 PF16200 C-terminal region of band_7 RD15_RS13390 PF01145 SPFH domain / Band 7 family RD15_RS13405 PF00117 Glutamine amidotransferase class-I RD15_RS13405 PF00958 GMP synthase C terminal domain RD15_RS13410 PF00391 PEP-utilising enzyme, mobile domain RD15_RS13410 PF02896 PEP-utilising enzyme, TIM barrel domain RD15_RS13410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RD15_RS13415 PF03618 Kinase/pyrophosphorylase RD15_RS13420 PF00588 SpoU rRNA Methylase family RD15_RS13420 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD15_RS13425 PF01351 Ribonuclease HII RD15_RS13430 PF02684 Lipid-A-disaccharide synthetase RD15_RS13435 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RD15_RS13435 PF00132 Bacterial transferase hexapeptide (six repeats) RD15_RS13440 PF07977 FabA-like domain RD15_RS13445 PF00132 Bacterial transferase hexapeptide (six repeats) RD15_RS13445 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RD15_RS13450 PF03938 Outer membrane protein (OmpH-like) RD15_RS13455 PF01103 Surface antigen RD15_RS13455 PF07244 Surface antigen variable number repeat RD15_RS13460 PF17820 PDZ domain RD15_RS13460 PF02163 Peptidase family M50 RD15_RS13465 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RD15_RS13465 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RD15_RS13465 PF13288 DXP reductoisomerase C-terminal domain RD15_RS13475 PF01255 Putative undecaprenyl diphosphate synthase RD15_RS13480 PF01765 Ribosome recycling factor RD15_RS13485 PF00696 Amino acid kinase family RD15_RS13490 PF00889 Elongation factor TS RD15_RS13495 PF00318 Ribosomal protein S2 RD15_RS13500 PF00557 Metallopeptidase family M24 RD15_RS13505 PF08335 GlnD PII-uridylyltransferase RD15_RS13505 PF01966 HD domain RD15_RS13505 PF01909 Nucleotidyltransferase domain RD15_RS13520 PF00156 Phosphoribosyl transferase domain RD15_RS13535 PF02875 Mur ligase family, glutamate ligase domain RD15_RS13535 PF08245 Mur ligase middle domain RD15_RS13545 PF07196 Flagellin hook IN motif RD15_RS13545 PF02465 Flagellar hook-associated protein 2 N-terminus RD15_RS13545 PF07195 Flagellar hook-associated protein 2 C-terminus RD15_RS13550 PF02561 Flagellar protein FliS RD15_RS13570 PF01312 FlhB HrpN YscU SpaS Family RD15_RS13580 PF02049 Flagellar hook-basal body complex protein FliE RD15_RS13585 PF08345 Flagellar M-ring protein C-terminal RD15_RS13585 PF01514 Secretory protein of YscJ/FliF family RD15_RS13590 PF01706 FliG C-terminal domain RD15_RS13590 PF14841 FliG middle domain RD15_RS13590 PF14842 FliG N-terminal domain RD15_RS13600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD15_RS13600 PF18269 T3SS EscN ATPase C-terminal domain RD15_RS13625 PF03748 Flagellar basal body-associated protein FliL RD15_RS13630 PF02154 Flagellar motor switch protein FliM RD15_RS13630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD15_RS13635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RD15_RS13635 PF16973 Flagellar motor switch protein FliN N-terminal RD15_RS13640 PF04347 Flagellar biosynthesis protein, FliO RD15_RS13645 PF00813 FliP family RD15_RS13650 PF01313 Bacterial export proteins, family 3 RD15_RS13655 PF01311 Bacterial export proteins, family 1 RD15_RS13665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD15_RS13665 PF08447 PAS fold RD15_RS13670 PF02203 Tar ligand binding domain homologue RD15_RS13670 PF00672 HAMP domain RD15_RS13670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD15_RS13675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD15_RS13675 PF00672 HAMP domain RD15_RS13675 PF02203 Tar ligand binding domain homologue RD15_RS13680 PF00669 Bacterial flagellin N-terminal helical region RD15_RS13685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD15_RS13685 PF00460 Flagella basal body rod protein RD15_RS13690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RD15_RS13690 PF10135 Rod binding protein RD15_RS13695 PF02119 Flagellar P-ring protein RD15_RS13700 PF02107 Flagellar L-ring protein RD15_RS13705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD15_RS13705 PF00460 Flagella basal body rod protein RD15_RS13710 PF00460 Flagella basal body rod protein RD15_RS13710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD15_RS13715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD15_RS13715 PF07559 Flagellar basal body protein FlaE RD15_RS13715 PF00460 Flagella basal body rod protein RD15_RS13720 PF03963 Flagellar hook capping protein - N-terminal region RD15_RS13720 PF13861 FlgD Tudor-like domain RD15_RS13720 PF13860 FlgD Ig-like domain RD15_RS13725 PF00460 Flagella basal body rod protein RD15_RS13725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RD15_RS13730 PF00460 Flagella basal body rod protein RD15_RS13740 PF04316 Anti-sigma-28 factor, FlgM RD15_RS13750 PF00448 SRP54-type protein, GTPase domain RD15_RS13760 PF01312 FlhB HrpN YscU SpaS Family RD15_RS13770 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS13775 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS13780 PF00005 ABC transporter RD15_RS13790 PF08546 Ketopantoate reductase PanE/ApbA C terminal RD15_RS13790 PF02558 Ketopantoate reductase PanE/ApbA RD15_RS13795 PF13378 Enolase C-terminal domain-like RD15_RS13800 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS13810 PF00694 Aconitase C-terminal domain RD15_RS13815 PF00356 Bacterial regulatory proteins, lacI family RD15_RS13820 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS13825 PF02515 CoA-transferase family III RD15_RS13835 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS13840 PF13607 Succinyl-CoA ligase like flavodoxin domain RD15_RS13840 PF13380 CoA binding domain RD15_RS13845 PF07729 FCD domain RD15_RS13845 PF00392 Bacterial regulatory proteins, gntR family RD15_RS13850 PF03328 HpcH/HpaI aldolase/citrate lyase family RD15_RS13860 PF03466 LysR substrate binding domain RD15_RS13860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS13870 PF12951 Passenger-associated-transport-repeat RD15_RS13880 PF03551 Transcriptional regulator PadR-like family RD15_RS13885 PF03372 Endonuclease/Exonuclease/phosphatase family RD15_RS13890 PF13091 PLD-like domain RD15_RS13905 PF03706 Lysylphosphatidylglycerol synthase TM region RD15_RS13935 PF00128 Alpha amylase, catalytic domain RD15_RS13935 PF11896 Domain of unknown function (DUF3416) RD15_RS13940 PF16657 Maltogenic Amylase, C-terminal domain RD15_RS13940 PF00128 Alpha amylase, catalytic domain RD15_RS13945 PF00128 Alpha amylase, catalytic domain RD15_RS13945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD15_RS13945 PF02806 Alpha amylase, C-terminal all-beta domain RD15_RS13950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD15_RS13950 PF00128 Alpha amylase, catalytic domain RD15_RS13955 PF11941 Domain of unknown function (DUF3459) RD15_RS13955 PF00128 Alpha amylase, catalytic domain RD15_RS13955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RD15_RS13965 PF02446 4-alpha-glucanotransferase RD15_RS13970 PF00128 Alpha amylase, catalytic domain RD15_RS13980 PF08543 Phosphomethylpyrimidine kinase RD15_RS13985 PF01168 Alanine racemase, N-terminal domain RD15_RS13990 PF00155 Aminotransferase class I and II RD15_RS13990 PF00392 Bacterial regulatory proteins, gntR family RD15_RS14005 PF00582 Universal stress protein family RD15_RS14010 PF00248 Aldo/keto reductase family RD15_RS14020 PF02868 Thermolysin metallopeptidase, alpha-helical domain RD15_RS14020 PF01447 Thermolysin metallopeptidase, catalytic domain RD15_RS14020 PF16485 Protealysin propeptide RD15_RS14025 PF07681 DoxX RD15_RS14045 PF00578 AhpC/TSA family RD15_RS14050 PF03960 ArsC family RD15_RS14055 PF02515 CoA-transferase family III RD15_RS14075 PF00255 Glutathione peroxidase RD15_RS14080 PF02798 Glutathione S-transferase, N-terminal domain RD15_RS14080 PF00043 Glutathione S-transferase, C-terminal domain RD15_RS14095 PF10437 Bacterial lipoate protein ligase C-terminus RD15_RS14095 PF03099 Biotin/lipoate A/B protein ligase family RD15_RS14110 PF02666 Phosphatidylserine decarboxylase RD15_RS14115 PF01070 FMN-dependent dehydrogenase RD15_RS14120 PF03180 NLPA lipoprotein RD15_RS14125 PF08808 RES domain RD15_RS14135 PF04241 Protein of unknown function (DUF423) RD15_RS14155 PF13458 Periplasmic binding protein RD15_RS14160 PF17912 MalK OB fold domain RD15_RS14160 PF00005 ABC transporter RD15_RS14165 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS14170 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS14175 PF13416 Bacterial extracellular solute-binding protein RD15_RS14180 PF03807 NADP oxidoreductase coenzyme F420-dependent RD15_RS14180 PF14748 Pyrroline-5-carboxylate reductase dimerisation RD15_RS14185 PF02592 Putative vitamin uptake transporter RD15_RS14195 PF13458 Periplasmic binding protein RD15_RS14200 PF02653 Branched-chain amino acid transport system / permease component RD15_RS14205 PF11862 Domain of unknown function (DUF3382) RD15_RS14205 PF02653 Branched-chain amino acid transport system / permease component RD15_RS14210 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS14210 PF00005 ABC transporter RD15_RS14215 PF00005 ABC transporter RD15_RS14220 PF01177 Asp/Glu/Hydantoin racemase RD15_RS14235 PF00892 EamA-like transporter family RD15_RS14245 PF04235 Protein of unknown function (DUF418) RD15_RS14250 PF00521 DNA gyrase/topoisomerase IV, subunit A RD15_RS14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS14260 PF00986 DNA gyrase B subunit, carboxyl terminus RD15_RS14260 PF00204 DNA gyrase B RD15_RS14260 PF01751 Toprim domain RD15_RS14265 PF00085 Thioredoxin RD15_RS14270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RD15_RS14270 PF07498 Rho termination factor, N-terminal domain RD15_RS14270 PF07497 Rho termination factor, RNA-binding domain RD15_RS14280 PF03710 Glutamate-ammonia ligase adenylyltransferase RD15_RS14280 PF08335 GlnD PII-uridylyltransferase RD15_RS14285 PF02677 Epoxyqueuosine reductase QueH RD15_RS14290 PF03315 Serine dehydratase beta chain RD15_RS14290 PF03313 Serine dehydratase alpha chain RD15_RS14295 PF02690 Na+/Pi-cotransporter RD15_RS14300 PF01738 Dienelactone hydrolase family RD15_RS14310 PF01612 3'-5' exonuclease RD15_RS14310 PF01367 5'-3' exonuclease, C-terminal SAM fold RD15_RS14310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RD15_RS14310 PF00476 DNA polymerase family A RD15_RS14315 PF03641 Possible lysine decarboxylase RD15_RS14330 PF00009 Elongation factor Tu GTP binding domain RD15_RS14330 PF03144 Elongation factor Tu domain 2 RD15_RS14330 PF00679 Elongation factor G C-terminus RD15_RS14335 PF01509 TruB family pseudouridylate synthase (N terminal domain) RD15_RS14335 PF16198 tRNA pseudouridylate synthase B C-terminal domain RD15_RS14340 PF02033 Ribosome-binding factor A RD15_RS14345 PF08364 Bacterial translation initiation factor IF-2 associated region RD15_RS14345 PF04760 Translation initiation factor IF-2, N-terminal region RD15_RS14345 PF00009 Elongation factor Tu GTP binding domain RD15_RS14345 PF11987 Translation-initiation factor 2 RD15_RS14350 PF08529 NusA N-terminal domain RD15_RS14350 PF13184 NusA-like KH domain RD15_RS14355 PF17384 RimP C-terminal SH3 domain RD15_RS14355 PF02576 RimP N-terminal domain RD15_RS14360 PF00849 RNA pseudouridylate synthase RD15_RS14360 PF01479 S4 domain RD15_RS14365 PF04079 Segregation and condensation complex subunit ScpB RD15_RS14375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS14375 PF03466 LysR substrate binding domain RD15_RS14380 PF00881 Nitroreductase family RD15_RS14385 PF07683 Cobalamin synthesis protein cobW C-terminal domain RD15_RS14385 PF02492 CobW/HypB/UreG, nucleotide-binding domain RD15_RS14405 PF02798 Glutathione S-transferase, N-terminal domain RD15_RS14405 PF14497 Glutathione S-transferase, C-terminal domain RD15_RS14410 PF02401 LytB protein RD15_RS14415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RD15_RS14420 PF04002 RadC-like JAB domain RD15_RS14425 PF04199 Putative cyclase RD15_RS14430 PF03301 Tryptophan 2,3-dioxygenase RD15_RS14435 PF01197 Ribosomal protein L31 RD15_RS14445 PF01554 MatE RD15_RS14460 PF18073 Rubredoxin metal binding domain RD15_RS14465 PF00092 von Willebrand factor type A domain RD15_RS14465 PF12450 von Willebrand factor RD15_RS14465 PF12034 Domain of unknown function (DUF3520) RD15_RS14470 PF04545 Sigma-70, region 4 RD15_RS14470 PF04542 Sigma-70 region 2 RD15_RS14490 PF01168 Alanine racemase, N-terminal domain RD15_RS14490 PF00842 Alanine racemase, C-terminal domain RD15_RS14505 PF01593 Flavin containing amine oxidoreductase RD15_RS14505 PF01593 Flavin containing amine oxidoreductase RD15_RS14510 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RD15_RS14520 PF01061 ABC-2 type transporter RD15_RS14525 PF00005 ABC transporter RD15_RS14545 PF02424 ApbE family RD15_RS14550 PF00667 FAD binding domain RD15_RS14550 PF00175 Oxidoreductase NAD-binding domain RD15_RS14550 PF00258 Flavodoxin RD15_RS14560 PF07969 Amidohydrolase family RD15_RS14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS14565 PF03466 LysR substrate binding domain RD15_RS14575 PF09370 Phosphoenolpyruvate hydrolase-like RD15_RS14590 PF03797 Autotransporter beta-domain RD15_RS14590 PF03212 Pertactin RD15_RS14595 PF03212 Pertactin RD15_RS14595 PF03797 Autotransporter beta-domain RD15_RS14605 PF10431 C-terminal, D2-small domain, of ClpB protein RD15_RS14605 PF17871 AAA lid domain RD15_RS14605 PF02861 Clp amino terminal domain, pathogenicity island component RD15_RS14605 PF07724 AAA domain (Cdc48 subfamily) RD15_RS14605 PF00004 ATPase family associated with various cellular activities (AAA) RD15_RS14610 PF13545 Crp-like helix-turn-helix domain RD15_RS14610 PF00027 Cyclic nucleotide-binding domain RD15_RS14625 PF00293 NUDIX domain RD15_RS14630 PF12843 Putative quorum-sensing-regulated virulence factor RD15_RS14640 PF12680 SnoaL-like domain RD15_RS14640 PF08281 Sigma-70, region 4 RD15_RS14640 PF04542 Sigma-70 region 2 RD15_RS14645 PF02627 Carboxymuconolactone decarboxylase family RD15_RS14675 PF00155 Aminotransferase class I and II RD15_RS14680 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS14685 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS14690 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS14695 PF00005 ABC transporter RD15_RS14715 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD15_RS14740 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS14745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RD15_RS14745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RD15_RS14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS14750 PF03466 LysR substrate binding domain RD15_RS14760 PF17676 LD-carboxypeptidase C-terminal domain RD15_RS14760 PF02016 LD-carboxypeptidase N-terminal domain RD15_RS14775 PF07690 Major Facilitator Superfamily RD15_RS14785 PF03466 LysR substrate binding domain RD15_RS14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS14790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RD15_RS14790 PF13378 Enolase C-terminal domain-like RD15_RS14795 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS14815 PF02567 Phenazine biosynthesis-like protein RD15_RS14825 PF03239 Iron permease FTR1 family RD15_RS14835 PF10634 Fe2+ transport protein RD15_RS14840 PF07879 PHB/PHA accumulation regulator DNA-binding domain RD15_RS14840 PF05233 PHB accumulation regulatory domain RD15_RS14845 PF00106 short chain dehydrogenase RD15_RS14850 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RD15_RS14855 PF02578 Multi-copper polyphenol oxidoreductase laccase RD15_RS14860 PF01479 S4 domain RD15_RS14860 PF00849 RNA pseudouridylate synthase RD15_RS14865 PF13525 Outer membrane lipoprotein RD15_RS14870 PF13307 Helicase C-terminal domain RD15_RS14870 PF04851 Type III restriction enzyme, res subunit RD15_RS14875 PF17674 HHH domain RD15_RS14875 PF00575 S1 RNA binding domain RD15_RS14875 PF09371 Tex-like protein N-terminal domain RD15_RS14875 PF16921 Tex protein YqgF-like domain RD15_RS14880 PF00579 tRNA synthetases class I (W and Y) RD15_RS14905 PF07715 TonB-dependent Receptor Plug Domain RD15_RS14905 PF00593 TonB dependent receptor RD15_RS14910 PF04773 FecR protein RD15_RS14910 PF16220 Domain of unknown function (DUF4880) RD15_RS14915 PF04542 Sigma-70 region 2 RD15_RS14915 PF08281 Sigma-70, region 4 RD15_RS14940 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS14950 PF03466 LysR substrate binding domain RD15_RS14960 PF03969 AFG1-like ATPase RD15_RS14965 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS14965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD15_RS14970 PF02817 e3 binding domain RD15_RS14970 PF00364 Biotin-requiring enzyme RD15_RS14970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RD15_RS14975 PF02779 Transketolase, pyrimidine binding domain RD15_RS14975 PF00676 Dehydrogenase E1 component RD15_RS14975 PF16078 2-oxoglutarate dehydrogenase N-terminus RD15_RS14975 PF16870 2-oxoglutarate dehydrogenase C-terminal RD15_RS14980 PF03169 OPT oligopeptide transporter protein RD15_RS14985 PF03169 OPT oligopeptide transporter protein RD15_RS14990 PF01037 Lrp/AsnC ligand binding domain RD15_RS14995 PF17831 Pyruvate dehydrogenase E1 component middle domain RD15_RS14995 PF00456 Transketolase, thiamine diphosphate binding domain RD15_RS15000 PF01515 Phosphate acetyl/butaryl transferase RD15_RS15000 PF03949 Malic enzyme, NAD binding domain RD15_RS15000 PF00390 Malic enzyme, N-terminal domain RD15_RS15005 PF16970 Type-1 fimbrial protein, A RD15_RS15015 PF01272 Transcription elongation factor, GreA/GreB, C-term RD15_RS15015 PF03449 Transcription elongation factor, N-terminal RD15_RS15020 PF02811 PHP domain RD15_RS15055 PF01026 TatD related DNase RD15_RS15060 PF00005 ABC transporter RD15_RS15065 PF02687 FtsX-like permease family RD15_RS15065 PF12704 MacB-like periplasmic core domain RD15_RS15075 PF17768 RecJ OB domain RD15_RS15075 PF02272 DHHA1 domain RD15_RS15075 PF01368 DHH family RD15_RS15080 PF03462 PCRF domain RD15_RS15080 PF00472 RF-1 domain RD15_RS15085 PF00106 short chain dehydrogenase RD15_RS15090 PF01336 OB-fold nucleic acid binding domain RD15_RS15090 PF00152 tRNA synthetases class II (D, K and N) RD15_RS15100 PF00440 Bacterial regulatory proteins, tetR family RD15_RS15100 PF17932 Tetracyclin repressor-like, C-terminal domain RD15_RS15105 PF00501 AMP-binding enzyme RD15_RS15110 PF00005 ABC transporter RD15_RS15130 PF00005 ABC transporter RD15_RS15130 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS15140 PF07689 KaiB domain RD15_RS15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS15140 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS15145 PF00486 Transcriptional regulatory protein, C terminal RD15_RS15145 PF00072 Response regulator receiver domain RD15_RS15150 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RD15_RS15160 PF03631 Virulence factor BrkB RD15_RS15175 PF01207 Dihydrouridine synthase (Dus) RD15_RS15180 PF01636 Phosphotransferase enzyme family RD15_RS15200 PF01985 CRS1 / YhbY (CRM) domain RD15_RS15205 PF01728 FtsJ-like methyltransferase RD15_RS15210 PF01434 Peptidase family M41 RD15_RS15210 PF06480 FtsH Extracellular RD15_RS15210 PF17862 AAA+ lid domain RD15_RS15210 PF00004 ATPase family associated with various cellular activities (AAA) RD15_RS15215 PF00809 Pterin binding enzyme RD15_RS15220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RD15_RS15220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RD15_RS15220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RD15_RS15220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RD15_RS15230 PF02541 Ppx/GppA phosphatase family RD15_RS15235 PF13090 Polyphosphate kinase C-terminal domain 2 RD15_RS15235 PF02503 Polyphosphate kinase middle domain RD15_RS15235 PF17941 Polyphosphate kinase C-terminal domain 1 RD15_RS15235 PF13089 Polyphosphate kinase N-terminal domain RD15_RS15240 PF12849 PBP superfamily domain RD15_RS15245 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS15250 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS15255 PF00005 ABC transporter RD15_RS15275 PF01337 Barstar (barnase inhibitor) RD15_RS15285 PF03949 Malic enzyme, NAD binding domain RD15_RS15285 PF01515 Phosphate acetyl/butaryl transferase RD15_RS15285 PF00390 Malic enzyme, N-terminal domain RD15_RS15295 PF00155 Aminotransferase class I and II RD15_RS15300 PF01464 Transglycosylase SLT domain RD15_RS15300 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RD15_RS15305 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RD15_RS15330 PF14824 Sirohaem biosynthesis protein central RD15_RS15330 PF10414 Sirohaem synthase dimerisation region RD15_RS15330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RD15_RS15335 PF03212 Pertactin RD15_RS15335 PF03797 Autotransporter beta-domain RD15_RS15350 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RD15_RS15355 PF02547 Queuosine biosynthesis protein RD15_RS15360 PF01702 Queuine tRNA-ribosyltransferase RD15_RS15370 PF02699 Preprotein translocase subunit RD15_RS15375 PF02355 Protein export membrane protein RD15_RS15375 PF07549 SecD/SecF GG Motif RD15_RS15375 PF13721 SecD export protein N-terminal TM region RD15_RS15380 PF02355 Protein export membrane protein RD15_RS15380 PF07549 SecD/SecF GG Motif RD15_RS15395 PF04055 Radical SAM superfamily RD15_RS15395 PF01938 TRAM domain RD15_RS15395 PF00919 Uncharacterized protein family UPF0004 RD15_RS15400 PF02562 PhoH-like protein RD15_RS15405 PF02130 Uncharacterized protein family UPF0054 RD15_RS15410 PF03471 Transporter associated domain RD15_RS15410 PF00571 CBS domain RD15_RS15415 PF00795 Carbon-nitrogen hydrolase RD15_RS15420 PF00248 Aldo/keto reductase family RD15_RS15445 PF04344 Chemotaxis phosphatase, CheZ RD15_RS15450 PF00072 Response regulator receiver domain RD15_RS15455 PF01339 CheB methylesterase RD15_RS15455 PF00072 Response regulator receiver domain RD15_RS15465 PF02203 Tar ligand binding domain homologue RD15_RS15465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RD15_RS15465 PF00672 HAMP domain RD15_RS15470 PF01584 CheW-like domain RD15_RS15475 PF01584 CheW-like domain RD15_RS15475 PF01627 Hpt domain RD15_RS15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS15475 PF09078 CheY binding RD15_RS15475 PF02895 Signal transducing histidine kinase, homodimeric domain RD15_RS15480 PF00072 Response regulator receiver domain RD15_RS15485 PF13677 Membrane MotB of proton-channel complex MotA/MotB RD15_RS15485 PF00691 OmpA family RD15_RS15490 PF01618 MotA/TolQ/ExbB proton channel family RD15_RS15495 PF05280 Flagellar transcriptional activator (FlhC) RD15_RS15500 PF05247 Flagellar transcriptional activator (FlhD) RD15_RS15505 PF04545 Sigma-70, region 4 RD15_RS15505 PF04539 Sigma-70 region 3 RD15_RS15505 PF04542 Sigma-70 region 2 RD15_RS15515 PF01176 Translation initiation factor 1A / IF-1 RD15_RS15525 PF08525 Opacity-associated protein A N-terminal motif RD15_RS15525 PF01551 Peptidase family M23 RD15_RS15525 PF01476 LysM domain RD15_RS15535 PF00994 Probable molybdopterin binding domain RD15_RS15540 PF01384 Phosphate transporter family RD15_RS15545 PF03591 AzlC protein RD15_RS15555 PF01556 DnaJ C terminal domain RD15_RS15555 PF00226 DnaJ domain RD15_RS15575 PF02798 Glutathione S-transferase, N-terminal domain RD15_RS15575 PF14834 Glutathione S-transferase, C-terminal domain RD15_RS15580 PF11339 Protein of unknown function (DUF3141) RD15_RS15585 PF01515 Phosphate acetyl/butaryl transferase RD15_RS15590 PF00871 Acetokinase family RD15_RS15600 PF00162 Phosphoglycerate kinase RD15_RS15605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RD15_RS15605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RD15_RS15610 PF02779 Transketolase, pyrimidine binding domain RD15_RS15610 PF00456 Transketolase, thiamine diphosphate binding domain RD15_RS15610 PF02780 Transketolase, C-terminal domain RD15_RS15615 PF04452 RNA methyltransferase RD15_RS15625 PF00700 Bacterial flagellin C-terminal helical region RD15_RS15625 PF00669 Bacterial flagellin N-terminal helical region RD15_RS15630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RD15_RS15630 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS15640 PF00456 Transketolase, thiamine diphosphate binding domain RD15_RS15640 PF17831 Pyruvate dehydrogenase E1 component middle domain RD15_RS15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS15645 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS15645 PF00989 PAS fold RD15_RS15650 PF00072 Response regulator receiver domain RD15_RS15650 PF00196 Bacterial regulatory proteins, luxR family RD15_RS15655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RD15_RS15655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RD15_RS15660 PF01432 Peptidase family M3 RD15_RS15665 PF02630 SCO1/SenC RD15_RS15675 PF02321 Outer membrane efflux protein RD15_RS15680 PF00873 AcrB/AcrD/AcrF family RD15_RS15685 PF00529 HlyD membrane-fusion protein of T1SS RD15_RS15685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD15_RS15690 PF03466 LysR substrate binding domain RD15_RS15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS15695 PF01479 S4 domain RD15_RS15695 PF00849 RNA pseudouridylate synthase RD15_RS15700 PF04345 Chorismate lyase RD15_RS15705 PF07690 Major Facilitator Superfamily RD15_RS15715 PF00248 Aldo/keto reductase family RD15_RS15720 PF00293 NUDIX domain RD15_RS15725 PF01245 Ribosomal protein L19 RD15_RS15740 PF04055 Radical SAM superfamily RD15_RS15750 PF01507 Phosphoadenosine phosphosulfate reductase family RD15_RS15755 PF01507 Phosphoadenosine phosphosulfate reductase family RD15_RS15760 PF17850 CysA C-terminal regulatory domain RD15_RS15760 PF00005 ABC transporter RD15_RS15760 PF12857 TOBE-like domain RD15_RS15765 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS15770 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS15785 PF00578 AhpC/TSA family RD15_RS15785 PF10417 C-terminal domain of 1-Cys peroxiredoxin RD15_RS15790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS15790 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS15790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS15790 PF12806 Acetyl-CoA dehydrogenase C-terminal like RD15_RS15795 PF00766 Electron transfer flavoprotein FAD-binding domain RD15_RS15795 PF01012 Electron transfer flavoprotein domain RD15_RS15800 PF01012 Electron transfer flavoprotein domain RD15_RS15805 PF00850 Histone deacetylase domain RD15_RS15810 PF13406 Transglycosylase SLT domain RD15_RS15815 PF00291 Pyridoxal-phosphate dependent enzyme RD15_RS15825 PF10531 SLBB domain RD15_RS15830 PF01370 NAD dependent epimerase/dehydratase family RD15_RS15835 PF00294 pfkB family carbohydrate kinase RD15_RS15840 PF18073 Rubredoxin metal binding domain RD15_RS15850 PF00216 Bacterial DNA-binding protein RD15_RS15855 PF00575 S1 RNA binding domain RD15_RS15860 PF02224 Cytidylate kinase RD15_RS15865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD15_RS15870 PF02153 Prephenate dehydrogenase RD15_RS15875 PF00800 Prephenate dehydratase RD15_RS15875 PF01817 Chorismate mutase type II RD15_RS15875 PF01842 ACT domain RD15_RS15880 PF00266 Aminotransferase class-V RD15_RS15885 PF03989 DNA gyrase C-terminal domain, beta-propeller RD15_RS15885 PF00521 DNA gyrase/topoisomerase IV, subunit A RD15_RS15890 PF00691 OmpA family RD15_RS15900 PF13419 Haloacid dehalogenase-like hydrolase RD15_RS15905 PF07690 Major Facilitator Superfamily RD15_RS15930 PF03466 LysR substrate binding domain RD15_RS15930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS15935 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS15960 PF00501 AMP-binding enzyme RD15_RS15960 PF13193 AMP-binding enzyme C-terminal domain RD15_RS15970 PF03466 LysR substrate binding domain RD15_RS15970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS15975 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS15985 PF01557 Fumarylacetoacetate (FAA) hydrolase family RD15_RS16000 PF04303 PrpF protein RD15_RS16010 PF00890 FAD binding domain RD15_RS16010 PF14537 Cytochrome c3 RD15_RS16015 PF00171 Aldehyde dehydrogenase family RD15_RS16020 PF03972 MmgE/PrpD family RD15_RS16030 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS16040 PF09084 NMT1/THI5 like RD15_RS16045 PF03466 LysR substrate binding domain RD15_RS16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS16060 PF00817 impB/mucB/samB family RD15_RS16060 PF11799 impB/mucB/samB family C-terminal domain RD15_RS16060 PF11798 IMS family HHH motif RD15_RS16070 PF00326 Prolyl oligopeptidase family RD15_RS16075 PF17092 Penicillin-binding protein OB-like domain RD15_RS16075 PF00912 Transglycosylase RD15_RS16075 PF00905 Penicillin binding protein transpeptidase domain RD15_RS16080 PF00149 Calcineurin-like phosphoesterase RD15_RS16095 PF00248 Aldo/keto reductase family RD15_RS16100 PF00248 Aldo/keto reductase family RD15_RS16105 PF00664 ABC transporter transmembrane region RD15_RS16105 PF00005 ABC transporter RD15_RS16150 PF01039 Carboxyl transferase domain RD15_RS16155 PF02785 Biotin carboxylase C-terminal domain RD15_RS16155 PF00289 Biotin carboxylase, N-terminal domain RD15_RS16155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RD15_RS16160 PF00392 Bacterial regulatory proteins, gntR family RD15_RS16160 PF07702 UTRA domain RD15_RS16180 PF02436 Conserved carboxylase domain RD15_RS16180 PF00682 HMGL-like RD15_RS16180 PF00364 Biotin-requiring enzyme RD15_RS16185 PF00364 Biotin-requiring enzyme RD15_RS16215 PF07238 PilZ domain RD15_RS16215 PF07317 Flagellar regulator YcgR RD15_RS16230 PF05724 Thiopurine S-methyltransferase (TPMT) RD15_RS16235 PF00664 ABC transporter transmembrane region RD15_RS16235 PF00005 ABC transporter RD15_RS16250 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RD15_RS16250 PF01433 Peptidase family M1 domain RD15_RS16250 PF11940 Domain of unknown function (DUF3458) Ig-like fold RD15_RS16255 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RD15_RS16265 PF02542 YgbB family RD15_RS16270 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RD15_RS16275 PF00271 Helicase conserved C-terminal domain RD15_RS16275 PF00270 DEAD/DEAH box helicase RD15_RS16275 PF17757 UvrB interaction domain RD15_RS16275 PF03461 TRCF domain RD15_RS16275 PF02559 CarD-like/TRCF domain RD15_RS16285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS16285 PF03466 LysR substrate binding domain RD15_RS16290 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS16295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS16295 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS16295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS16310 PF07715 TonB-dependent Receptor Plug Domain RD15_RS16310 PF00593 TonB dependent receptor RD15_RS16315 PF00593 TonB dependent receptor RD15_RS16315 PF07715 TonB-dependent Receptor Plug Domain RD15_RS16325 PF00361 Proton-conducting membrane transporter RD15_RS16330 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus RD15_RS16330 PF00361 Proton-conducting membrane transporter RD15_RS16335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RD15_RS16335 PF00361 Proton-conducting membrane transporter RD15_RS16340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RD15_RS16345 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RD15_RS16350 PF12838 4Fe-4S dicluster domain RD15_RS16355 PF00146 NADH dehydrogenase RD15_RS16360 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal RD15_RS16360 PF00384 Molybdopterin oxidoreductase RD15_RS16360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RD15_RS16365 PF10531 SLBB domain RD15_RS16365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RD15_RS16365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RD15_RS16375 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RD15_RS16380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RD15_RS16385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RD15_RS16390 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RD15_RS16395 PF13609 Gram-negative porin RD15_RS16420 PF01569 PAP2 superfamily RD15_RS16430 PF00781 Diacylglycerol kinase catalytic domain RD15_RS16435 PF03466 LysR substrate binding domain RD15_RS16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS16440 PF02028 BCCT, betaine/carnitine/choline family transporter RD15_RS16450 PF01638 HxlR-like helix-turn-helix RD15_RS16455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RD15_RS16460 PF00873 AcrB/AcrD/AcrF family RD15_RS16465 PF02321 Outer membrane efflux protein RD15_RS16475 PF00127 Copper binding proteins, plastocyanin/azurin family RD15_RS16485 PF05378 Hydantoinase/oxoprolinase N-terminal region RD15_RS16485 PF01968 Hydantoinase/oxoprolinase RD15_RS16495 PF01266 FAD dependent oxidoreductase RD15_RS16500 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS16515 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RD15_RS16520 PF01053 Cys/Met metabolism PLP-dependent enzyme RD15_RS16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS16525 PF03466 LysR substrate binding domain RD15_RS16540 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS16545 PF14698 Argininosuccinate lyase C-terminal RD15_RS16545 PF00206 Lyase RD15_RS16560 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS16565 PF07476 Methylaspartate ammonia-lyase C-terminus RD15_RS16565 PF05034 Methylaspartate ammonia-lyase N-terminus RD15_RS16575 PF02028 BCCT, betaine/carnitine/choline family transporter RD15_RS16585 PF03840 Preprotein translocase SecG subunit RD15_RS16590 PF00121 Triosephosphate isomerase RD15_RS16595 PF00698 Acyl transferase domain RD15_RS16595 PF02801 Beta-ketoacyl synthase, C-terminal domain RD15_RS16595 PF16197 Ketoacyl-synthetase C-terminal extension RD15_RS16595 PF08240 Alcohol dehydrogenase GroES-like domain RD15_RS16595 PF00109 Beta-ketoacyl synthase, N-terminal domain RD15_RS16595 PF00550 Phosphopantetheine attachment site RD15_RS16595 PF08990 Erythronolide synthase docking RD15_RS16595 PF14765 Polyketide synthase dehydratase RD15_RS16595 PF08659 KR domain RD15_RS16610 PF00291 Pyridoxal-phosphate dependent enzyme RD15_RS16610 PF13291 ACT domain RD15_RS16625 PF00013 KH domain RD15_RS16625 PF03725 3' exoribonuclease family, domain 2 RD15_RS16625 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RD15_RS16625 PF00575 S1 RNA binding domain RD15_RS16625 PF01138 3' exoribonuclease family, domain 1 RD15_RS16630 PF00312 Ribosomal protein S15 RD15_RS16640 PF01066 CDP-alcohol phosphatidyltransferase RD15_RS16645 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RD15_RS16645 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RD15_RS16650 PF10369 Small subunit of acetolactate synthase RD15_RS16655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS16655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS16655 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS16675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS16675 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS16675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS16685 PF09084 NMT1/THI5 like RD15_RS16690 PF00005 ABC transporter RD15_RS16695 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS16705 PF13193 AMP-binding enzyme C-terminal domain RD15_RS16705 PF00501 AMP-binding enzyme RD15_RS16710 PF08240 Alcohol dehydrogenase GroES-like domain RD15_RS16710 PF00107 Zinc-binding dehydrogenase RD15_RS16715 PF00392 Bacterial regulatory proteins, gntR family RD15_RS16715 PF07729 FCD domain RD15_RS16725 PF00392 Bacterial regulatory proteins, gntR family RD15_RS16725 PF07729 FCD domain RD15_RS16730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS16730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS16730 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS16750 PF01063 Amino-transferase class IV RD15_RS16755 PF00005 ABC transporter RD15_RS16760 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS16770 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS16775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS16775 PF03466 LysR substrate binding domain RD15_RS16780 PF02321 Outer membrane efflux protein RD15_RS16785 PF13533 Biotin-lipoyl like RD15_RS16790 PF03412 Peptidase C39 family RD15_RS16790 PF00005 ABC transporter RD15_RS16790 PF00664 ABC transporter transmembrane region RD15_RS16795 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) RD15_RS16795 PF02382 N-terminal domain in RTX protein RD15_RS16795 PF03497 Anthrax toxin LF subunit RD15_RS16805 PF02794 RTX toxin acyltransferase family RD15_RS16810 PF00171 Aldehyde dehydrogenase family RD15_RS16820 PF01266 FAD dependent oxidoreductase RD15_RS16825 PF02538 Hydantoinase B/oxoprolinase RD15_RS16830 PF05378 Hydantoinase/oxoprolinase N-terminal region RD15_RS16830 PF01968 Hydantoinase/oxoprolinase RD15_RS16835 PF03466 LysR substrate binding domain RD15_RS16835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS16845 PF00348 Polyprenyl synthetase RD15_RS16855 PF00829 Ribosomal prokaryotic L21 protein RD15_RS16860 PF01016 Ribosomal L27 protein RD15_RS16865 PF01926 50S ribosome-binding GTPase RD15_RS16865 PF01018 GTP1/OBG RD15_RS16870 PF00696 Amino acid kinase family RD15_RS16870 PF01472 PUA domain RD15_RS16910 PF16220 Domain of unknown function (DUF4880) RD15_RS16910 PF04773 FecR protein RD15_RS16915 PF00593 TonB dependent receptor RD15_RS16915 PF07715 TonB-dependent Receptor Plug Domain RD15_RS16920 PF04264 YceI-like domain RD15_RS16935 PF03435 Saccharopine dehydrogenase NADP binding domain RD15_RS16935 PF16653 Saccharopine dehydrogenase C-terminal domain RD15_RS16940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD15_RS16960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS16965 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS16970 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS16975 PF00005 ABC transporter RD15_RS16975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS16980 PF01425 Amidase RD15_RS16985 PF00202 Aminotransferase class-III RD15_RS17005 PF04972 BON domain RD15_RS17005 PF00691 OmpA family RD15_RS17010 PF01329 Pterin 4 alpha carbinolamine dehydratase RD15_RS17020 PF00483 Nucleotidyl transferase RD15_RS17025 PF01636 Phosphotransferase enzyme family RD15_RS17030 PF04453 LPS transport system D RD15_RS17035 PF00639 PPIC-type PPIASE domain RD15_RS17035 PF09312 SurA N-terminal domain RD15_RS17040 PF00398 Ribosomal RNA adenine dimethylase RD15_RS17045 PF02595 Glycerate kinase family RD15_RS17050 PF00224 Pyruvate kinase, barrel domain RD15_RS17050 PF02887 Pyruvate kinase, alpha/beta domain RD15_RS17055 PF07670 Nucleoside recognition RD15_RS17060 PF09317 Domain of unknown function (DUF1974) RD15_RS17060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RD15_RS17060 PF02770 Acyl-CoA dehydrogenase, middle domain RD15_RS17060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RD15_RS17075 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS17080 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS17085 PF00005 ABC transporter RD15_RS17090 PF01032 FecCD transport family RD15_RS17100 PF00691 OmpA family RD15_RS17105 PF07676 WD40-like Beta Propeller Repeat RD15_RS17105 PF04052 TolB amino-terminal domain RD15_RS17115 PF02472 Biopolymer transport protein ExbD/TolR RD15_RS17120 PF01618 MotA/TolQ/ExbB proton channel family RD15_RS17125 PF03061 Thioesterase superfamily RD15_RS17130 PF03129 Anticodon binding domain RD15_RS17130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RD15_RS17130 PF04073 Aminoacyl-tRNA editing domain RD15_RS17135 PF00293 NUDIX domain RD15_RS17140 PF00486 Transcriptional regulatory protein, C terminal RD15_RS17140 PF00072 Response regulator receiver domain RD15_RS17150 PF02586 SOS response associated peptidase (SRAP) RD15_RS17215 PF06791 Prophage tail length tape measure protein RD15_RS17360 PF00270 DEAD/DEAH box helicase RD15_RS17360 PF00271 Helicase conserved C-terminal domain RD15_RS17375 PF01063 Amino-transferase class IV RD15_RS17390 PF00561 alpha/beta hydrolase fold RD15_RS17395 PF13181 Tetratricopeptide repeat RD15_RS17395 PF01435 Peptidase family M48 RD15_RS17400 PF00483 Nucleotidyl transferase RD15_RS17410 PF13609 Gram-negative porin RD15_RS17435 PF00557 Metallopeptidase family M24 RD15_RS17435 PF05195 Aminopeptidase P, N-terminal domain RD15_RS17445 PF01494 FAD binding domain RD15_RS17450 PF01207 Dihydrouridine synthase (Dus) RD15_RS17455 PF02954 Bacterial regulatory protein, Fis family RD15_RS17460 PF02142 MGS-like domain RD15_RS17460 PF01808 AICARFT/IMPCHase bienzyme RD15_RS17465 PF02075 Crossover junction endodeoxyribonuclease RuvC RD15_RS17470 PF01330 RuvA N terminal domain RD15_RS17470 PF07499 RuvA, C-terminal domain RD15_RS17475 PF01370 NAD dependent epimerase/dehydratase family RD15_RS17480 PF00291 Pyridoxal-phosphate dependent enzyme RD15_RS17485 PF17864 RuvB AAA lid domain RD15_RS17485 PF05496 Holliday junction DNA helicase RuvB P-loop domain RD15_RS17485 PF05491 RuvB C-terminal winged helix domain RD15_RS17490 PF09382 RQC domain RD15_RS17490 PF16124 RecQ zinc-binding RD15_RS17490 PF00570 HRDC domain RD15_RS17490 PF00271 Helicase conserved C-terminal domain RD15_RS17490 PF00270 DEAD/DEAH box helicase RD15_RS17505 PF00484 Carbonic anhydrase RD15_RS17510 PF01425 Amidase RD15_RS17515 PF13458 Periplasmic binding protein RD15_RS17520 PF02653 Branched-chain amino acid transport system / permease component RD15_RS17525 PF02653 Branched-chain amino acid transport system / permease component RD15_RS17530 PF00005 ABC transporter RD15_RS17530 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS17535 PF00005 ABC transporter RD15_RS17540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RD15_RS17540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RD15_RS17550 PF03180 NLPA lipoprotein RD15_RS17565 PF00994 Probable molybdopterin binding domain RD15_RS17565 PF02464 Competence-damaged protein RD15_RS17565 PF18146 Damage-inducible protein CinA KH domain RD15_RS17570 PF01614 Bacterial transcriptional regulator RD15_RS17570 PF09339 IclR helix-turn-helix domain RD15_RS17575 PF05785 Rho-activating domain of cytotoxic necrotizing factor RD15_RS17575 PF18807 Tripartite Tc toxins repeat RD15_RS17580 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS17590 PF01180 Dihydroorotate dehydrogenase RD15_RS17595 PF04376 Arginine-tRNA-protein transferase, N terminus RD15_RS17595 PF04377 Arginine-tRNA-protein transferase, C terminus RD15_RS17605 PF03466 LysR substrate binding domain RD15_RS17605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS17645 PF00392 Bacterial regulatory proteins, gntR family RD15_RS17645 PF07729 FCD domain RD15_RS17650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RD15_RS17650 PF00205 Thiamine pyrophosphate enzyme, central domain RD15_RS17650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RD15_RS17655 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS17660 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD15_RS17665 PF03949 Malic enzyme, NAD binding domain RD15_RS17665 PF00390 Malic enzyme, N-terminal domain RD15_RS17665 PF01515 Phosphate acetyl/butaryl transferase RD15_RS17675 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS17685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS17685 PF00005 ABC transporter RD15_RS17700 PF03466 LysR substrate binding domain RD15_RS17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS17715 PF01022 Bacterial regulatory protein, arsR family RD15_RS17730 PF03594 Benzoate membrane transport protein RD15_RS17735 PF00037 4Fe-4S binding domain RD15_RS17740 PF01467 Cytidylyltransferase-like RD15_RS17750 PF02881 SRP54-type protein, helical bundle domain RD15_RS17750 PF00448 SRP54-type protein, GTPase domain RD15_RS17765 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS17770 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS17775 PF00005 ABC transporter RD15_RS17785 PF00005 ABC transporter RD15_RS17805 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RD15_RS17805 PF00925 GTP cyclohydrolase II RD15_RS17810 PF00885 6,7-dimethyl-8-ribityllumazine synthase RD15_RS17815 PF01029 NusB family RD15_RS17820 PF02769 AIR synthase related protein, C-terminal domain RD15_RS17820 PF00586 AIR synthase related protein, N-terminal domain RD15_RS17825 PF04608 Phosphatidylglycerophosphatase A RD15_RS17830 PF00994 Probable molybdopterin binding domain RD15_RS17830 PF18146 Damage-inducible protein CinA KH domain RD15_RS17830 PF02464 Competence-damaged protein RD15_RS17835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RD15_RS17840 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS17845 PF01219 Prokaryotic diacylglycerol kinase RD15_RS17850 PF03631 Virulence factor BrkB RD15_RS17855 PF03212 Pertactin RD15_RS17855 PF03797 Autotransporter beta-domain RD15_RS17860 PF00118 TCP-1/cpn60 chaperonin family RD15_RS17865 PF00166 Chaperonin 10 Kd subunit RD15_RS17885 PF00890 FAD binding domain RD15_RS17895 PF03466 LysR substrate binding domain RD15_RS17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS17900 PF00890 FAD binding domain RD15_RS17920 PF00990 Diguanylate cyclase, GGDEF domain RD15_RS17925 PF00072 Response regulator receiver domain RD15_RS17955 PF12867 DinB superfamily RD15_RS17955 PF03781 Sulfatase-modifying factor enzyme 1 RD15_RS17960 PF10017 Histidine-specific methyltransferase, SAM-dependent RD15_RS17970 PF13091 PLD-like domain RD15_RS17970 PF13396 Phospholipase_D-nuclease N-terminal RD15_RS17980 PF01645 Conserved region in glutamate synthase RD15_RS17985 PF04143 Sulphur transport RD15_RS17990 PF03547 Membrane transport protein RD15_RS17995 PF13673 Acetyltransferase (GNAT) domain RD15_RS18015 PF00575 S1 RNA binding domain RD15_RS18015 PF00773 RNB domain RD15_RS18015 PF08206 Ribonuclease B OB domain RD15_RS18015 PF08461 Ribonuclease R winged-helix domain RD15_RS18015 PF17876 Cold shock domain RD15_RS18020 PF08032 RNA 2'-O ribose methyltransferase substrate binding RD15_RS18020 PF00588 SpoU rRNA Methylase family RD15_RS18025 PF01053 Cys/Met metabolism PLP-dependent enzyme RD15_RS18030 PF13640 2OG-Fe(II) oxygenase superfamily RD15_RS18030 PF18331 PKHD-type hydroxylase C-terminal domain RD15_RS18035 PF00216 Bacterial DNA-binding protein RD15_RS18050 PF01618 MotA/TolQ/ExbB proton channel family RD15_RS18055 PF02472 Biopolymer transport protein ExbD/TolR RD15_RS18060 PF00486 Transcriptional regulatory protein, C terminal RD15_RS18060 PF00072 Response regulator receiver domain RD15_RS18065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS18065 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS18065 PF08521 Two-component sensor kinase N-terminal RD15_RS18070 PF02705 K+ potassium transporter RD15_RS18075 PF00764 Arginosuccinate synthase RD15_RS18080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RD15_RS18080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RD15_RS18085 PF00202 Aminotransferase class-III RD15_RS18095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS18095 PF03466 LysR substrate binding domain RD15_RS18105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RD15_RS18105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RD15_RS18110 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS18125 PF00392 Bacterial regulatory proteins, gntR family RD15_RS18125 PF07729 FCD domain RD15_RS18135 PF07690 Major Facilitator Superfamily RD15_RS18145 PF02627 Carboxymuconolactone decarboxylase family RD15_RS18150 PF00578 AhpC/TSA family RD15_RS18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS18155 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS18155 PF00672 HAMP domain RD15_RS18165 PF00072 Response regulator receiver domain RD15_RS18165 PF00486 Transcriptional regulatory protein, C terminal RD15_RS18170 PF00814 Glycoprotease family RD15_RS18175 PF03167 Uracil DNA glycosylase superfamily RD15_RS18180 PF07690 Major Facilitator Superfamily RD15_RS18185 PF06470 SMC proteins Flexible Hinge Domain RD15_RS18185 PF02463 RecF/RecN/SMC N terminal domain RD15_RS18195 PF12826 Helix-hairpin-helix motif RD15_RS18195 PF00533 BRCA1 C Terminus (BRCT) domain RD15_RS18195 PF01653 NAD-dependent DNA ligase adenylation domain RD15_RS18195 PF03120 NAD-dependent DNA ligase OB-fold domain RD15_RS18195 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RD15_RS18210 PF04279 Intracellular septation protein A RD15_RS18215 PF01641 SelR domain RD15_RS18220 PF00005 ABC transporter RD15_RS18225 PF02361 Cobalt transport protein RD15_RS18230 PF02632 BioY family RD15_RS18245 PF00005 ABC transporter RD15_RS18245 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS18250 PF01063 Amino-transferase class IV RD15_RS18265 PF02653 Branched-chain amino acid transport system / permease component RD15_RS18275 PF00005 ABC transporter RD15_RS18280 PF00005 ABC transporter RD15_RS18280 PF12399 Branched-chain amino acid ATP-binding cassette transporter RD15_RS18285 PF00730 HhH-GPD superfamily base excision DNA repair protein RD15_RS18285 PF00633 Helix-hairpin-helix motif RD15_RS18285 PF10576 Iron-sulfur binding domain of endonuclease III RD15_RS18290 PF04060 Putative Fe-S cluster RD15_RS18300 PF00970 Oxidoreductase FAD-binding domain RD15_RS18300 PF00175 Oxidoreductase NAD-binding domain RD15_RS18305 PF00037 4Fe-4S binding domain RD15_RS18305 PF11953 Domain of unknown function (DUF3470) RD15_RS18310 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RD15_RS18310 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RD15_RS18315 PF01042 Endoribonuclease L-PSP RD15_RS18325 PF06167 Glucose-regulated metallo-peptidase M90 RD15_RS18330 PF02824 TGS domain RD15_RS18330 PF13291 ACT domain RD15_RS18330 PF04607 Region found in RelA / SpoT proteins RD15_RS18335 PF07687 Peptidase dimerisation domain RD15_RS18335 PF01546 Peptidase family M20/M25/M40 RD15_RS18340 PF00291 Pyridoxal-phosphate dependent enzyme RD15_RS18345 PF00290 Tryptophan synthase alpha chain RD15_RS18350 PF01039 Carboxyl transferase domain RD15_RS18350 PF17848 Acetyl-coA carboxylase zinc finger domain RD15_RS18355 PF09411 Lipid A 3-O-deacylase (PagL) RD15_RS18370 PF02965 Vitamin B12 dependent methionine synthase, activation domain RD15_RS18370 PF02607 B12 binding domain RD15_RS18370 PF02310 B12 binding domain RD15_RS18370 PF00809 Pterin binding enzyme RD15_RS18370 PF02574 Homocysteine S-methyltransferase RD15_RS18375 PF07715 TonB-dependent Receptor Plug Domain RD15_RS18375 PF00593 TonB dependent receptor RD15_RS18380 PF01497 Periplasmic binding protein RD15_RS18385 PF05690 Thiazole biosynthesis protein ThiG RD15_RS18390 PF08543 Phosphomethylpyrimidine kinase RD15_RS18405 PF02321 Outer membrane efflux protein RD15_RS18410 PF01467 Cytidylyltransferase-like RD15_RS18420 PF01594 AI-2E family transporter RD15_RS18430 PF02254 TrkA-N domain RD15_RS18430 PF07885 Ion channel RD15_RS18440 PF00164 Ribosomal protein S12/S23 RD15_RS18445 PF00177 Ribosomal protein S7p/S5e RD15_RS18450 PF03144 Elongation factor Tu domain 2 RD15_RS18450 PF14492 Elongation Factor G, domain II RD15_RS18450 PF00009 Elongation factor Tu GTP binding domain RD15_RS18450 PF03764 Elongation factor G, domain IV RD15_RS18450 PF00679 Elongation factor G C-terminus RD15_RS18455 PF03144 Elongation factor Tu domain 2 RD15_RS18455 PF03143 Elongation factor Tu C-terminal domain RD15_RS18455 PF00009 Elongation factor Tu GTP binding domain RD15_RS18460 PF00338 Ribosomal protein S10p/S20e RD15_RS18465 PF00297 Ribosomal protein L3 RD15_RS18470 PF00573 Ribosomal protein L4/L1 family RD15_RS18475 PF00276 Ribosomal protein L23 RD15_RS18480 PF00181 Ribosomal Proteins L2, RNA binding domain RD15_RS18480 PF03947 Ribosomal Proteins L2, C-terminal domain RD15_RS18485 PF00203 Ribosomal protein S19 RD15_RS18490 PF00237 Ribosomal protein L22p/L17e RD15_RS18495 PF07650 KH domain RD15_RS18495 PF00189 Ribosomal protein S3, C-terminal domain RD15_RS18500 PF00252 Ribosomal protein L16p/L10e RD15_RS18505 PF00831 Ribosomal L29 protein RD15_RS18510 PF00366 Ribosomal protein S17 RD15_RS18520 PF00171 Aldehyde dehydrogenase family RD15_RS18530 PF00238 Ribosomal protein L14p/L23e RD15_RS18535 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RD15_RS18540 PF00281 Ribosomal protein L5 RD15_RS18540 PF00673 ribosomal L5P family C-terminus RD15_RS18545 PF00253 Ribosomal protein S14p/S29e RD15_RS18550 PF00410 Ribosomal protein S8 RD15_RS18555 PF00347 Ribosomal protein L6 RD15_RS18560 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RD15_RS18565 PF00333 Ribosomal protein S5, N-terminal domain RD15_RS18565 PF03719 Ribosomal protein S5, C-terminal domain RD15_RS18570 PF00327 Ribosomal protein L30p/L7e RD15_RS18575 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RD15_RS18580 PF00344 SecY translocase RD15_RS18585 PF01176 Translation initiation factor 1A / IF-1 RD15_RS18590 PF00444 Ribosomal protein L36 RD15_RS18595 PF00416 Ribosomal protein S13/S18 RD15_RS18600 PF00411 Ribosomal protein S11 RD15_RS18605 PF01479 S4 domain RD15_RS18605 PF00163 Ribosomal protein S4/S9 N-terminal domain RD15_RS18610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RD15_RS18610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RD15_RS18610 PF01000 RNA polymerase Rpb3/RpoA insert domain RD15_RS18615 PF01196 Ribosomal protein L17 RD15_RS18625 PF03091 CutA1 divalent ion tolerance protein RD15_RS18630 PF02683 Cytochrome C biogenesis protein transmembrane region RD15_RS18630 PF11412 Disulphide bond corrector protein DsbC RD15_RS18635 PF00892 EamA-like transporter family RD15_RS18640 PF00490 Delta-aminolevulinic acid dehydratase RD15_RS18645 PF01926 50S ribosome-binding GTPase RD15_RS18650 PF00034 Cytochrome c RD15_RS18655 PF05140 ResB-like family RD15_RS18660 PF01578 Cytochrome C assembly protein RD15_RS18665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RD15_RS18665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RD15_RS18670 PF01491 Frataxin-like domain RD15_RS18675 PF00912 Transglycosylase RD15_RS18675 PF17092 Penicillin-binding protein OB-like domain RD15_RS18675 PF00905 Penicillin binding protein transpeptidase domain RD15_RS18680 PF01202 Shikimate kinase RD15_RS18685 PF01761 3-dehydroquinate synthase RD15_RS18690 PF13286 Phosphohydrolase-associated domain RD15_RS18690 PF01966 HD domain RD15_RS18695 PF13417 Glutathione S-transferase, N-terminal domain RD15_RS18695 PF00043 Glutathione S-transferase, C-terminal domain RD15_RS18700 PF17760 UvrA interaction domain RD15_RS18700 PF17755 UvrA DNA-binding domain RD15_RS18705 PF07690 Major Facilitator Superfamily RD15_RS18710 PF00436 Single-strand binding protein family RD15_RS18715 PF00593 TonB dependent receptor RD15_RS18715 PF07715 TonB-dependent Receptor Plug Domain RD15_RS18725 PF03328 HpcH/HpaI aldolase/citrate lyase family RD15_RS18735 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS18745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS18745 PF03466 LysR substrate binding domain RD15_RS18750 PF01979 Amidohydrolase family RD15_RS18755 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS18760 PF00534 Glycosyl transferases group 1 RD15_RS18760 PF13439 Glycosyltransferase Family 4 RD15_RS18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS18770 PF03466 LysR substrate binding domain RD15_RS18780 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS18785 PF00005 ABC transporter RD15_RS18805 PF01274 Malate synthase RD15_RS18810 PF00392 Bacterial regulatory proteins, gntR family RD15_RS18810 PF07729 FCD domain RD15_RS18825 PF01040 UbiA prenyltransferase family RD15_RS18830 PF00155 Aminotransferase class I and II RD15_RS18835 PF13185 GAF domain RD15_RS18840 PF00701 Dihydrodipicolinate synthetase family RD15_RS18850 PF04972 BON domain RD15_RS18850 PF01476 LysM domain RD15_RS18855 PF05690 Thiazole biosynthesis protein ThiG RD15_RS18855 PF02597 ThiS family RD15_RS18860 PF00561 alpha/beta hydrolase fold RD15_RS18865 PF02390 Putative methyltransferase RD15_RS18880 PF00682 HMGL-like RD15_RS18885 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS18900 PF00392 Bacterial regulatory proteins, gntR family RD15_RS18900 PF07702 UTRA domain RD15_RS18905 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS18915 PF00392 Bacterial regulatory proteins, gntR family RD15_RS18915 PF07702 UTRA domain RD15_RS18920 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS18930 PF00005 ABC transporter RD15_RS18935 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS18940 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS18945 PF08990 Erythronolide synthase docking RD15_RS18945 PF14765 Polyketide synthase dehydratase RD15_RS18945 PF16197 Ketoacyl-synthetase C-terminal extension RD15_RS18945 PF00109 Beta-ketoacyl synthase, N-terminal domain RD15_RS18945 PF02801 Beta-ketoacyl synthase, C-terminal domain RD15_RS18945 PF00698 Acyl transferase domain RD15_RS18945 PF08240 Alcohol dehydrogenase GroES-like domain RD15_RS18945 PF08659 KR domain RD15_RS18945 PF00550 Phosphopantetheine attachment site RD15_RS18950 PF02515 CoA-transferase family III RD15_RS18955 PF00440 Bacterial regulatory proteins, tetR family RD15_RS18960 PF00293 NUDIX domain RD15_RS18960 PF09297 NADH pyrophosphatase zinc ribbon domain RD15_RS18965 PF00175 Oxidoreductase NAD-binding domain RD15_RS18965 PF00111 2Fe-2S iron-sulfur cluster binding domain RD15_RS18965 PF00970 Oxidoreductase FAD-binding domain RD15_RS18970 PF01425 Amidase RD15_RS18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RD15_RS18980 PF03466 LysR substrate binding domain RD15_RS18985 PF13458 Periplasmic binding protein RD15_RS18995 PF00005 ABC transporter RD15_RS19005 PF02653 Branched-chain amino acid transport system / permease component RD15_RS19015 PF00355 Rieske [2Fe-2S] domain RD15_RS19030 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RD15_RS19030 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RD15_RS19045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RD15_RS19045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RD15_RS19045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RD15_RS19050 PF07690 Major Facilitator Superfamily RD15_RS19055 PF00132 Bacterial transferase hexapeptide (six repeats) RD15_RS19055 PF12804 MobA-like NTP transferase domain RD15_RS19055 PF14602 Hexapeptide repeat of succinyl-transferase RD15_RS19075 PF02630 SCO1/SenC RD15_RS19080 PF01040 UbiA prenyltransferase family RD15_RS19085 PF02628 Cytochrome oxidase assembly protein RD15_RS19105 PF00510 Cytochrome c oxidase subunit III RD15_RS19120 PF00115 Cytochrome C and Quinol oxidase polypeptide I RD15_RS19125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RD15_RS19125 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RD15_RS19135 PF00999 Sodium/hydrogen exchanger family RD15_RS19140 PF00149 Calcineurin-like phosphoesterase RD15_RS19145 PF04545 Sigma-70, region 4 RD15_RS19145 PF04542 Sigma-70 region 2 RD15_RS19145 PF00140 Sigma-70 factor, region 1.2 RD15_RS19155 PF00756 Putative esterase RD15_RS19160 PF08240 Alcohol dehydrogenase GroES-like domain RD15_RS19160 PF00107 Zinc-binding dehydrogenase RD15_RS19170 PF00310 Glutamine amidotransferases class-II RD15_RS19170 PF01493 GXGXG motif RD15_RS19170 PF01645 Conserved region in glutamate synthase RD15_RS19170 PF04898 Glutamate synthase central domain RD15_RS19175 PF07992 Pyridine nucleotide-disulphide oxidoreductase RD15_RS19175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RD15_RS19180 PF03922 OmpW family RD15_RS19185 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS19190 PF00005 ABC transporter RD15_RS19195 PF02405 Permease MlaE RD15_RS19200 PF02470 MlaD protein RD15_RS19205 PF04333 MlaA lipoprotein RD15_RS19215 PF00005 ABC transporter RD15_RS19220 PF01061 ABC-2 type transporter RD15_RS19230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RD15_RS19235 PF01634 ATP phosphoribosyltransferase RD15_RS19240 PF00815 Histidinol dehydrogenase RD15_RS19245 PF00155 Aminotransferase class I and II RD15_RS19250 PF00475 Imidazoleglycerol-phosphate dehydratase RD15_RS19255 PF00117 Glutamine amidotransferase class-I RD15_RS19260 PF00977 Histidine biosynthesis protein RD15_RS19265 PF00977 Histidine biosynthesis protein RD15_RS19270 PF01502 Phosphoribosyl-AMP cyclohydrolase RD15_RS19275 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RD15_RS19280 PF01230 HIT domain RD15_RS19285 PF02416 mttA/Hcf106 family RD15_RS19290 PF02416 mttA/Hcf106 family RD15_RS19295 PF00902 Sec-independent protein translocase protein (TatC) RD15_RS19305 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS19310 PF02917 Pertussis toxin, subunit 1 RD15_RS19315 PF03440 Aerolysin/Pertussis toxin (APT) domain RD15_RS19315 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD15_RS19320 PF09275 Pertussis toxin S4 subunit RD15_RS19325 PF09276 Pertussis toxin S5 subunit RD15_RS19330 PF03440 Aerolysin/Pertussis toxin (APT) domain RD15_RS19330 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain RD15_RS19335 PF04956 TrbC/VIRB2 family RD15_RS19340 PF05101 Type IV secretory pathway, VirB3-like protein RD15_RS19345 PF03135 CagE, TrbE, VirB family, component of type IV transporter system RD15_RS19350 PF04610 TrbL/VirB6 plasmid conjugal transfer protein RD15_RS19360 PF04335 VirB8 protein RD15_RS19365 PF03524 Conjugal transfer protein RD15_RS19370 PF03743 Bacterial conjugation TrbI-like protein RD15_RS19375 PF00437 Type II/IV secretion system protein RD15_RS19385 PF00892 EamA-like transporter family RD15_RS19405 PF01926 50S ribosome-binding GTPase RD15_RS19405 PF10396 GTP-binding protein TrmE N-terminus RD15_RS19405 PF12631 MnmE helical domain RD15_RS19410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS19415 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS19420 PF12911 N-terminal TM domain of oligopeptide transport permease C RD15_RS19420 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS19425 PF00005 ABC transporter RD15_RS19425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS19435 PF01960 ArgJ family RD15_RS19445 PF00293 NUDIX domain RD15_RS19460 PF02321 Outer membrane efflux protein RD15_RS19465 PF00873 AcrB/AcrD/AcrF family RD15_RS19470 PF00873 AcrB/AcrD/AcrF family RD15_RS19475 PF13533 Biotin-lipoyl like RD15_RS19480 PF07072 Cell division protein RD15_RS19485 PF01121 Dephospho-CoA kinase RD15_RS19490 PF06750 Bacterial Peptidase A24 N-terminal domain RD15_RS19490 PF01478 Type IV leader peptidase family RD15_RS19505 PF02569 Pantoate-beta-alanine ligase RD15_RS19510 PF02616 Segregation and condensation protein ScpA RD15_RS19520 PF07690 Major Facilitator Superfamily RD15_RS19525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RD15_RS19525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RD15_RS19535 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS19540 PF00005 ABC transporter RD15_RS19545 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS19550 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS19555 PF00497 Bacterial extracellular solute-binding proteins, family 3 RD15_RS19560 PF00005 ABC transporter RD15_RS19565 PF18075 FtsX extracellular domain RD15_RS19570 PF03975 CheD chemotactic sensory transduction RD15_RS19580 PF10576 Iron-sulfur binding domain of endonuclease III RD15_RS19580 PF00633 Helix-hairpin-helix motif RD15_RS19580 PF14815 NUDIX domain RD15_RS19580 PF00730 HhH-GPD superfamily base excision DNA repair protein RD15_RS19590 PF08241 Methyltransferase domain RD15_RS19600 PF02515 CoA-transferase family III RD15_RS19605 PF02515 CoA-transferase family III RD15_RS19615 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS19620 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS19625 PF00881 Nitroreductase family RD15_RS19635 PF00682 HMGL-like RD15_RS19640 PF00378 Enoyl-CoA hydratase/isomerase RD15_RS19645 PF02515 CoA-transferase family III RD15_RS19650 PF03401 Tripartite tricarboxylate transporter family receptor RD15_RS19660 PF00199 Catalase RD15_RS19660 PF06628 Catalase-related immune-responsive RD15_RS19665 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS19670 PF00005 ABC transporter RD15_RS19680 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RD15_RS19685 PF07687 Peptidase dimerisation domain RD15_RS19685 PF01546 Peptidase family M20/M25/M40 RD15_RS19690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS19690 PF00005 ABC transporter RD15_RS19695 PF00005 ABC transporter RD15_RS19695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RD15_RS19700 PF12911 N-terminal TM domain of oligopeptide transport permease C RD15_RS19700 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS19705 PF00528 Binding-protein-dependent transport system inner membrane component RD15_RS19710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RD15_RS19715 PF12631 MnmE helical domain RD15_RS19715 PF10396 GTP-binding protein TrmE N-terminus RD15_RS19715 PF01926 50S ribosome-binding GTPase RD15_RS19725 PF00486 Transcriptional regulatory protein, C terminal RD15_RS19725 PF00072 Response regulator receiver domain RD15_RS19730 PF00512 His Kinase A (phospho-acceptor) domain RD15_RS19730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RD15_RS19745 PF01970 Tripartite tricarboxylate transporter TctA family RD15_RS19750 PF00155 Aminotransferase class I and II RD15_RS19755 PF00313 'Cold-shock' DNA-binding domain