locus strain_id interpro function go others BPTD_RS00005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|PTHR11806|PTHR11806:SF0|SM01228|SSF51905 BPTD_RS00010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|PTHR31760|PTHR31760:SF0|SSF53335|TIGR00138 BPTD_RS00015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 BPTD_RS00020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BPTD_RS00025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:3.90.1530.10|PF02195|PTHR33375|PTHR33375:SF1|SM00470|SSF109709|SSF110849|TIGR00180 BPTD_RS00030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase|Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal GO:0006520 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|PTHR11707|PTHR11707:SF29|SM00870|SSF53774 BPTD_RS00035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006034|IPR027473 Asparaginase/glutaminase|L-asparaginase, C-terminal domain GO:0006520 G3DSA:3.40.50.40|PIRSF001220|PIRSF500176|SSF53774 BPTD_RS00055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF151|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 BPTD_RS00065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PTHR33910|PTHR33910:SF1|TIGR00964 BPTD_RS00070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PS01014|PTHR30265|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 BPTD_RS00075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR020785 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PS00359|PTHR11661|SM00649|SSF46906|SSF54747|TIGR01632 BPTD_RS00080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|PTHR23105|PTHR23105:SF5|SSF56808|TIGR01169 BPTD_RS00085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001790|IPR002363|IPR022973 Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254 MF_00362|PD968187|PF00466|PS01109|PTHR11560|SSF160369 BPTD_RS00090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 BPTD_RS00095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR015712|IPR019462 DNA-directed RNA polymerase, beta subunit|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351|GO:0032549 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|PTHR20856|PTHR20856:SF20|SSF64484|TIGR02013 BPTD_RS00100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|PTHR19376|PTHR19376:SF32|SM00663|SSF64484|TIGR02386 BPTD_RS00110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011009 Protein kinase-like domain G3DSA:1.10.510.10|SSF56112 BPTD_RS00120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006860|IPR016930|IPR018392 FecR protein|LysM domain|Uncharacterised conserved protein UCP029644, LysM, PA4035 PF01476|PF04773|PIRSF029644 BPTD_RS00130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF292|SM00448|SM00862|SSF46894|SSF52172 BPTD_RS00135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.40.50.10540|PF02515|SSF89796 BPTD_RS00145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|PTHR34075|SSF50249 BPTD_RS00150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020616 Thiolase|Thiolase, N-terminal|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PIRSF000429|PTHR18919|PTHR18919:SF108|SSF53901 BPTD_RS00155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PTHR13078|SSF54637 BPTD_RS00160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30419|SSF46785|SSF53850 BPTD_RS00165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF15|SSF52096 BPTD_RS00170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS00175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23517|SSF103473 BPTD_RS00185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|PTHR30075|SSF55681|TIGR00388 BPTD_RS00190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008909|IPR015944 DALR anticodon binding|Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004814|GO:0004820|GO:0005524|GO:0005737|GO:0006420|GO:0006426 MF_00255|PF02092|PF05746|PR01045|PTHR30075|SSF109604|TIGR00211 BPTD_RS00195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004446|IPR006543|IPR006549|IPR023214 D,D-heptose 1,7-bisphosphate phosphatase|HAD-like domain|HAD-superfamily hydrolase,subfamily IIIA|Histidinol-phosphate phosphatase GO:0005975|GO:0016791 G3DSA:3.40.50.1000|PF13242|PIRSF004682|PTHR23133|PTHR23133:SF7|SSF56784|TIGR01656|TIGR01662 BPTD_RS00200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|SM00563|SSF69593 BPTD_RS00205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002725 Protein of unknown function DUF45 PF01863|PTHR30399 BPTD_RS00210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004360|IPR004361|IPR018146|IPR029068 Glyoxalase I|Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|PS00935|PTHR10374|SSF54593|TIGR00068 BPTD_RS00215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|PTHR10458:SF4|SSF56420|TIGR00079 BPTD_RS00225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|SM00421|SSF46894 BPTD_RS00245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547|PTHR36838|PTHR36838:SF2 BPTD_RS00250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|PTHR11091|SSF89733 BPTD_RS00255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR008220|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 G3DSA:3.40.50.1820|MF_00296|PF00561|PIRSF000443|PTHR32268|PTHR32268:SF11|SSF53474|TIGR01392 BPTD_RS00260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010743|IPR029063 Methionine biosynthesis MetW|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF07021|PTHR10108|PTHR10108:SF831|SSF53335|TIGR02081 BPTD_RS00265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR12778|SSF103473 BPTD_RS00280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001920|IPR004380|IPR015942|IPR018187 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu/hydantoin racemase|Aspartate racemase GO:0006520|GO:0006807|GO:0008152|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|PF01177|PS00923|PTHR21198|PTHR21198:SF6|SSF53681|TIGR00035 BPTD_RS00285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030206 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Glutamate/aspartate transport ATP-binding protein GltL/AatP|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006865|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF317|SM00382|SSF52540 BPTD_RS00290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065|IPR030205 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Glutamate/aspartate transport system permease protein GltK/AatM GO:0005215|GO:0006810|GO:0006865|GO:0016020|GO:0016021|GO:0043190 G3DSA:1.10.3720.10|PF00528|PTHR30614|PTHR30614:SF1|SSF161098|TIGR01726 BPTD_RS00295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065|IPR030202 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0005215|GO:0006810|GO:0006865|GO:0016020|GO:0016021|GO:0043190 G3DSA:1.10.3720.10|PF00528|PTHR30085|PTHR30085:SF4|SSF161098|TIGR01726 BPTD_RS00300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR30085|PTHR30085:SF2|SM00062|SSF53850 BPTD_RS00305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|PTHR37419|PTHR37419:SF2 BPTD_RS00320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13560|SSF47413 BPTD_RS00330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002818|IPR006286|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|Peptidase C56, PfpI GO:0016798 G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF112|SSF52317|TIGR01382 BPTD_RS00335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21496|SSF50022 BPTD_RS00340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR001221|IPR001433|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00410|PS00197|PTHR19370|PTHR19370:SF32|SSF52343|SSF54292|SSF63380 BPTD_RS00345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362 BPTD_RS00355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PTHR33376 BPTD_RS00360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 BPTD_RS00365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009534|IPR010921|IPR011991 Protein of unknown function DUF1153|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0043565 G3DSA:1.10.10.10|PF06627|SSF48295 BPTD_RS00380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|MF_00505|PF00183|PF02518|PIRSF002583|PR00775|PS00298|PTHR11528|PTHR11528:SF44|SM00387|SSF110942|SSF54211|SSF55874 BPTD_RS00385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PTHR11260|PTHR11260:SF157|SSF47616|SSF52833 BPTD_RS00390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|PTHR30417|PTHR30417:SF4|SM00644|SSF55846 BPTD_RS00395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001781 Zinc finger, LIM-type GO:0008270 G3DSA:2.10.110.10 BPTD_RS00400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578|PTHR38034 BPTD_RS00405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|PTHR11564|PTHR11564:SF7|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 BPTD_RS00410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003869|IPR016040 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF02719|PF13727|PTHR10366|PTHR10366:SF256|SSF51735 BPTD_RS00430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021260 Protein of unknown function DUF2837 PF10997 BPTD_RS00435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13477|PTHR12526|SSF53756 BPTD_RS00440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003362 Bacterial sugar transferase PF02397|PTHR30576 BPTD_RS00445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF3|SSF53383 BPTD_RS00450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13579|PF13692|PTHR12526|SSF53756 BPTD_RS00455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003331|IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761 G3DSA:3.40.50.2000|PF02350|PTHR18964|PTHR18964:SF70|SSF53756|TIGR00236 BPTD_RS00460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF15|SSF53383 BPTD_RS00465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|PTHR23416|PTHR23416:SF53|SSF51161 BPTD_RS00470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|PTHR22604:SF120|SSF51735|SSF55347 BPTD_RS00475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002201|IPR011908 Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase I GO:0008152|GO:0008920|GO:0009244|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF8|SSF53756|TIGR02193 BPTD_RS00480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal|Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PF04413|PTHR23417|PTHR23417:SF2|SSF53756 BPTD_RS00490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|MF_01274|PF03309|PTHR34265|SSF53067 BPTD_RS00495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003142|IPR004143|IPR004408|IPR008988 Biotin protein ligase, C-terminal|Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Transcriptional repressor, C-terminal GO:0004077|GO:0006464 G3DSA:2.30.30.100|G3DSA:3.30.930.10|PF02237|PF03099|PTHR12835|SSF50037|SSF55681|TIGR00121 BPTD_RS00500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|PTHR30188|PTHR30188:SF3|TIGR00056 BPTD_RS00505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF483|SM00382|SSF52540 BPTD_RS00520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 BPTD_RS00525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|PTHR12277|PTHR12277:SF79|SSF53474 BPTD_RS00530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001967|IPR012338|IPR012907|IPR015956|IPR018044 Beta-lactamase/transpeptidase-like|Penicillin-binding protein-associated|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0004180|GO:0006508|GO:0009002 G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|PTHR21581|SM00936|SSF56601|SSF69189 BPTD_RS00535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|PTHR11825:SF38|SSF56752 BPTD_RS00540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007454|IPR027471 Uncharacterised protein family UPF0250|YbeD-like domain G3DSA:3.30.70.1460|MF_00659|PF04359|PTHR38036|PTHR38036:SF1|SSF117991 BPTD_RS00545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000544|IPR004143|IPR020605 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Octanoyltransferase|Octanoyltransferase, conserved site GO:0005737|GO:0006464|GO:0009107|GO:0016415 G3DSA:3.90.1550.10|MF_00013|PD006086|PF03099|PIRSF016262|PS01313|PTHR10993|SSF55681|TIGR00214 BPTD_RS00550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003698|IPR006638|IPR007197|IPR013785|IPR031691 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lipoyl synthase|Lipoyl synthase, N-terminal|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PF16881|PIRSF005963|PTHR10949|SM00729|SSF102114|TIGR00510 BPTD_RS00555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|PTHR21047|PTHR21047:SF2|SSF51182|TIGR01221 BPTD_RS00560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005913|IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain|dTDP-4-dehydrorhamnose reductase family G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF04321|PTHR10491|PTHR10491:SF4|SSF51735|TIGR01214 BPTD_RS00565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005888|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase, conserved site|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225|GO:0016491 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PS00061|PTHR10366|PTHR10366:SF41|SSF51735|TIGR01181 BPTD_RS00570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000277|IPR006233|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF45|SSF53383|TIGR01324 BPTD_RS00585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001853|IPR012336|IPR013766|IPR017937|IPR023205 DSBA-like thioredoxin domain|Thiol:disulphide interchange protein DsbA/DsbL|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PF01323|PIRSF001488|PS00194|PTHR35891|PTHR35891:SF2|SSF52833 BPTD_RS00590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 BPTD_RS00595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|PTHR11956|PTHR11956:SF6|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 BPTD_RS00600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014991 Protein of unknown function DUF1840 PF08895 BPTD_RS00610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS00615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR32243|PTHR32243:SF7|SSF161098 BPTD_RS00620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF6|SSF161098 BPTD_RS00625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.190.10|PF13416|PTHR30061|PTHR30061:SF7|SSF53850 BPTD_RS00630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540 BPTD_RS00635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004843|IPR026575|IPR029052 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PF00149|PTHR12905|PTHR12905:SF7|SSF56300 BPTD_RS00640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF123|SM00382|SSF52540 BPTD_RS00650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF20|SSF161098 BPTD_RS00660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.190.10|PF13343|PTHR30006|SSF53850 BPTD_RS00665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13377|PTHR30146|SSF53822 BPTD_RS00675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|SSF75304 BPTD_RS00680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000891|IPR002034|IPR005668|IPR013709|IPR013785 2-isopropylmalate synthase|2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_00572|PF00682|PF08502|PS00815|PS00816|PTHR10277|PTHR10277:SF28|SM00917|SSF110921|SSF51569|SSF89000|TIGR00970 BPTD_RS00690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|PTHR32248|PTHR32248:SF4|TIGR02395 BPTD_RS00695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 BPTD_RS00700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 BPTD_RS00710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10|PF13609|SSF56935 BPTD_RS00720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000634|IPR001721|IPR001926|IPR005787 ACT-like domain|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, biosynthetic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006520|GO:0009097|GO:0030170 G3DSA:3.40.1020.10|G3DSA:3.40.50.1100|PF00291|PF00585|PS00165|PTHR10314|PTHR10314:SF30|SSF53686|SSF55021|TIGR01124 BPTD_RS00730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004017|IPR004113|IPR006094|IPR009051|IPR016164|IPR016166|IPR016167|IPR017896|IPR017900|IPR021817|IPR022153 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Protein of unknown function DUF3400|Protein of unknown function DUF3683 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.30.43.10|PF01565|PF02754|PF02913|PF11880|PF12447|PF13183|PS00198|PTHR11748|SSF46548|SSF55103|SSF56176 BPTD_RS00735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|PTHR11751:SF436|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS00740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS00745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002168|IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3|Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PS01173|PTHR23024|SSF53474 BPTD_RS00750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF85|SSF52096 BPTD_RS00755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF186|SSF51905 BPTD_RS00760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF186|SSF51905|SSF54373 BPTD_RS00765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS00770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF4|SM00346|SSF46785|SSF55781 BPTD_RS00775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005501|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|Uncharacterised protein family UPF0271, LamB/YcsF GO:0003824|GO:0005975 MF_00691|PF03746|PTHR30292|PTHR30292:SF0|SSF88713 BPTD_RS00780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003778|IPR029000 Carboxyltransferase domain, subdomain A and B|Cyclophilin-like domain PF02626|PTHR18866|PTHR18866:SF74|SM00797|SSF50891|TIGR00724 BPTD_RS00785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003833|IPR010016|IPR024946|IPR029000 Arginine repressor C-terminal-like domain|Carboxyltransferase domain, subdomain C and D|Cyclophilin-like domain|KipI family G3DSA:2.40.100.10|G3DSA:3.30.1360.40|PF02682|PTHR34698|PTHR34698:SF2|SM00796|SSF160467|SSF50891|TIGR00370 BPTD_RS00790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR39434|PTHR39434:SF1|SSF54593 BPTD_RS00795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF11|SSF46785|SSF53850 BPTD_RS00800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006139|IPR006140|IPR016040|IPR029015|IPR029752|IPR029753 D-3-phosphoglycerate dehydrogenase, type2|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0004617|GO:0006564|GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|PTHR10996|PTHR10996:SF18|SSF51735|SSF52283|SSF55021 BPTD_RS00805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007332 Protein of unknown function DUF411 PF04214 BPTD_RS00810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR006290 HAMP domain|Heavy metal sensor kinase|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0007165|GO:0016020|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|PTHR24423:SF354|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874|TIGR01386 BPTD_RS00815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR006291|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Transcriptional regulatory protein PcoR, heavy metal response|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF575|SM00448|SM00862|SSF52172|TIGR01387 BPTD_RS00820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR014310|IPR021766 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Protein of unknown function DUF3329|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphate regulon sensor PhoR|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF11808|PR00344|PTHR24423|PTHR24423:SF554|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR02966 BPTD_RS00825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011879|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000156|GO:0000160|GO:0003677|GO:0006355|GO:0006817 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF576|SM00448|SM00862|SSF46894|SSF52172|TIGR02154 BPTD_RS00830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|PTHR10108|PTHR10108:SF864|SSF53335|TIGR01934 BPTD_RS00835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007379|IPR032710 NTF2-like domain|Tim44-like domain PF04280|PTHR41542|PTHR41542:SF1|SM00978|SSF54427 BPTD_RS00840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003033 SCP2 sterol-binding domain PF02036|PTHR38693|PTHR38693:SF1 BPTD_RS00845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004147|IPR010232|IPR011009 Probable protein kinase UbiB|Protein kinase-like domain|UbiB domain GO:0006744 G3DSA:3.90.1200.10|PF03109|PTHR10566|PTHR10566:SF79|SSF56112|TIGR01982 BPTD_RS00850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009078|IPR012348 Ferritin-like superfamily|Ribonucleotide reductase-related GO:0016491|GO:0055114 G3DSA:1.10.620.20|SSF47240 BPTD_RS00855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF336|SM00382|SSF52540 BPTD_RS00865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007621 TPM domain PF04536|PTHR30373|PTHR30373:SF2 BPTD_RS00870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|PTHR34478|PTHR34478:SF2|SSF140478 BPTD_RS00875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417|IPR028622 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase RhlE|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0004004|GO:0005524|GO:0042255 G3DSA:3.40.50.300|MF_00968|PF00270|PF00271|PS00039|PTHR24031|PTHR24031:SF0|SM00487|SM00490|SSF52540 BPTD_RS00880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324|PTHR30086|PTHR30086:SF14 BPTD_RS00885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000795|IPR004161|IPR004548|IPR005225|IPR009000|IPR009022|IPR027417|IPR031157|IPR032090 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0005737|GO:0006415|GO:0016149 G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF03144|PF16658|PR00315|PS00301|PTHR23115|PTHR23115:SF69|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 BPTD_RS00895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|PTHR30295|PTHR30295:SF9|SSF47240|TIGR00754 BPTD_RS00900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.50.2300 BPTD_RS00910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724|PTHR35535|PTHR35535:SF1 BPTD_RS00915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005184|IPR025485 Domain of unknown function DUF306, Meta/HslJ|Domain of unknown function DUF4377 PF03724|PF14302 BPTD_RS00920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001763|IPR020936 Rhodanese-like domain|Uncharacterised protein family UPF0176 G3DSA:3.40.250.10|MF_00469|PF00581|PTHR22778|PTHR22778:SF21|SM00450|SSF52821 BPTD_RS00925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001412|IPR002547|IPR004495|IPR009080|IPR012340|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Methionine-tRNA ligase, type 1|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl-tRNA synthetase, beta subunit, C-terminal|Methionyl/Leucyl tRNA synthetase|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_00098|PF01588|PF09334|PR01041|PS00178|PTHR11946|PTHR11946:SF86|SSF47323|SSF50249|SSF52374|SSF57770|TIGR00398|TIGR00399 BPTD_RS00935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000808|IPR002744|IPR019591|IPR027417 Domain of unknown function DUF59|Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PS01215|PTHR23264|PTHR23264:SF19|SSF117916|SSF52540 BPTD_RS00940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|PF01103|PTHR12815|PTHR12815:SF12 BPTD_RS00945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007452 Translocation and assembly module TamB PF04357|PTHR36985 BPTD_RS00950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008180|IPR011962|IPR029054 Deoxycytidine triphosphate deaminase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0006229|GO:0008829|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00146|PF00692|PTHR11241|PTHR11241:SF1|SSF51283|TIGR02274 BPTD_RS00955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR34109|PTHR34109:SF3|SSF54593 BPTD_RS00960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BPTD_RS00965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|SSF55729 BPTD_RS00975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424 Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0005737|GO:0006520|GO:0016831 G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|PTHR11751|PTHR11751:SF406|SSF53383|SSF55904 BPTD_RS00980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004792|IPR023166|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|FAD/NAD(P)-binding domain|HI0933 insert-like domain GO:0016491|GO:0055114 G3DSA:1.10.8.260|G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00368|PR00411|PTHR10617|PTHR10617:SF103|SSF160996|SSF51905|TIGR00275 BPTD_RS00985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS00990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|PTHR11404|SSF46609|SSF54719 BPTD_RS00995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535|PTHR11040|PTHR11040:SF33 BPTD_RS01000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006222|IPR006223|IPR013977|IPR022903|IPR027266|IPR028896|IPR029043 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Glycine cleavage system T protein|Glycine cleavage system T protein, bacteria GO:0004047|GO:0005515|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|MF_00259|PF01571|PF08669|PIRSF006487|PTHR13847|PTHR13847:SF5|SSF101790|SSF103025|TIGR00528 BPTD_RS01005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002930|IPR003016|IPR011053|IPR017453 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|PTHR11715|SSF51230|TIGR00527 BPTD_RS01010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003437|IPR015421|IPR015424|IPR020580|IPR020581 Glycine cleavage system P protein|Glycine cleavage system P-protein, N-terminal|Glycine dehydrogenase (decarboxylating)|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0055114 G3DSA:3.40.640.10|MF_00711|PF02347|PTHR11773|PTHR11773:SF1|SSF53383|TIGR00461 BPTD_RS01015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS01020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS01025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS01030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096 BPTD_RS01035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019043 Restriction endonuclease, type II, HindIII PF09518 BPTD_RS01055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002817|IPR025747 Phosphomethylpyrimidine synthase|ThiC-associated domain GO:0009228|GO:0051536 MF_00089|PF01964|PF13667|PTHR30557|PTHR30557:SF1|TIGR00190 BPTD_RS01060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF200|SSF53720 BPTD_RS01065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PTHR11748|PTHR11748:SF76|SSF55103|SSF56176 BPTD_RS01070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS01075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011042|IPR011217 Six-bladed beta-propeller, TolB-like|Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 G3DSA:2.120.10.30|MF_01282|PIRSF026412|PTHR40274|PTHR40274:SF2|SSF63829 BPTD_RS01090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|PTHR23091|PTHR23091:SF187|SSF55729 BPTD_RS01095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|PTHR11587|PTHR11587:SF3|SSF52402|TIGR00364 BPTD_RS01100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015813|IPR018129|IPR021135|IPR022805|IPR033129 Phosphoenolpyruvate carboxylase|Phosphoenolpyruvate carboxylase, His active site|Phosphoenolpyruvate carboxylase, Lys active site|Phosphoenolpyruvate carboxylase, bacterial/plant-type|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0006099|GO:0008964|GO:0015977 G3DSA:1.20.1440.90|MF_00595|PF00311|PR00150|PS00393|PS00781|PTHR30523|PTHR30523:SF0|SSF51621 BPTD_RS01105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000209|IPR005546|IPR012332|IPR013425|IPR015500|IPR023828 Autotransporter beta-domain|Autotransporter-associated beta strand repeat|P22 tailspike C-terminal domain-like|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:2.160.20.20|G3DSA:2.40.128.130|G3DSA:3.40.50.200|PF00082|PF03797|PF12951|PR00723|PS00138|PTHR10795|PTHR10795:SF157|SM00869|SSF103515|SSF52743|TIGR02601 BPTD_RS01110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|PTHR23309|SSF48179|SSF51735 BPTD_RS01115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006160 Short chain fatty acid transporter AtoE PF02667|PTHR41983|PTHR41983:SF2 BPTD_RS01120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 BPTD_RS01125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR012794|IPR014757|IPR029016 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR|GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355|GO:0045893|GO:0046278 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF10|SM00346|SSF46785|SSF55781|TIGR02431 BPTD_RS01130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004163|IPR004165|IPR012792 3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase binding site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF01144|PS01273|PTHR13707|SM00882|SSF100950|TIGR02429 BPTD_RS01135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|PTHR13707|SM00882|SSF100950|TIGR02428 BPTD_RS01140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003464|IPR011008|IPR026029 Dimeric alpha-beta barrel|Muconolactone delta-isomerase|Muconolactone isomerase domain GO:0006725 PD006619|PF02426|PIRSF001486|SSF54909|TIGR03221 BPTD_RS01145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|PTHR33606|SSF54909 BPTD_RS01150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR026968|IPR029058 3-oxoadipate enol-lactonase 1/2|Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 GO:0042952|GO:0047570 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|PTHR10992:SF861|SSF53474|TIGR02427 BPTD_RS01155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 G3DSA:3.50.30.50|PF04199|PTHR34861|SSF102198 BPTD_RS01160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011690 Phosphate-starvation-induced PsiF repeat PF07769 BPTD_RS01165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PR00420|SSF51905 BPTD_RS01175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS01180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS01185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF2 BPTD_RS01190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF404 BPTD_RS01195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF13|SSF53822 BPTD_RS01200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|PTHR23024:SF163|SSF53474 BPTD_RS01205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|PTHR33164:SF3|SM00347|SSF46785 BPTD_RS01215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010708|IPR023214 5'(3')-deoxyribonucleotidase|HAD-like domain GO:0008253|GO:0009264 G3DSA:1.10.40.40|G3DSA:3.40.50.1000|PF06941|PTHR16504|SSF56784 BPTD_RS01240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF20|SSF46785|SSF53850 BPTD_RS01245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF4|SSF103473 BPTD_RS01250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF11|SSF143975|SSF52016|TIGR00110 BPTD_RS01255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PR00032|PTHR11019|PTHR11019:SF99|SM00342|SSF46689|SSF51182 BPTD_RS01260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000891|IPR002034|IPR013785 Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0019752|GO:0046912 G3DSA:3.20.20.70|PF00682|PS00815|PS00816|PTHR10277|PTHR10277:SF28|SSF51569 BPTD_RS01265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PR00032|PTHR11019|PTHR11019:SF99|SM00342|SSF46689|SSF51182 BPTD_RS01270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002168|IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3|Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PS01173|PTHR23024|PTHR23024:SF24|SSF53474 BPTD_RS01275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|PTHR30290|SSF53850 BPTD_RS01280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|PTHR10996|PTHR10996:SF114|SSF51735|SSF52283 BPTD_RS01285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007396|IPR012349 FMN-binding split barrel|Transcriptional regulator PAI 2-type GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF04299|PIRSF010372|PTHR35802|PTHR35802:SF1|SSF50475 BPTD_RS01290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF93|SM00228|SSF50156|SSF50494 BPTD_RS01300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002678 GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.40.1390.30|PF01784|PTHR13799|SSF102705|TIGR00486 BPTD_RS01305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 MF_00115|PF01741|PR01264|PTHR30266|PTHR30266:SF2|SSF81330|TIGR00220 BPTD_RS01310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005805|IPR006317|IPR014349|IPR017941 Rieske [2Fe-2S] iron-sulphur domain|Rieske iron-sulphur protein|Rieske iron-sulphur protein, C-terminal|Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0016020|GO:0016491|GO:0016679|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PR00162|PTHR10134|PTHR10134:SF8|SSF50022|TIGR01416 BPTD_RS01315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005798|IPR016174|IPR027387 Cytochrome b/b6, C-terminal|Cytochrome b/b6-like domain|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016491|GO:0022904 G3DSA:1.10.287.980|G3DSA:1.20.810.10|PF00032|PF00033|PTHR19271|PTHR19271:SF9|SSF81342|SSF81648 BPTD_RS01320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002326|IPR009056 Cytochrome c-like domain|Cytochrome c1 GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:1.20.5.100|PF02167|PR00603|PTHR10266|PTHR10266:SF3|SSF46626 BPTD_RS01325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|PTHR11260|PTHR11260:SF44|SSF47616|SSF52833 BPTD_RS01330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007481 Stringent starvation protein B G3DSA:2.30.30.220|PF04386|PIRSF005276|PTHR37486|PTHR37486:SF1|SSF101738 BPTD_RS01340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10 BPTD_RS01345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025319 Domain of unknown function DUF4224 PF13986 BPTD_RS01350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002299|IPR023614 Porin domain|Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 G3DSA:2.40.160.10|PF13609|PR00184|SSF56935 BPTD_RS01360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025421 Protein of unknown function DUF4148 PF13663 BPTD_RS01370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|PTHR32315|SSF53271|TIGR01090 BPTD_RS01375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR011527|IPR014223|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24222|PTHR24222:SF30|SM00382|SSF52540|SSF90123|TIGR02868 BPTD_RS01380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR011527|IPR014216|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016020|GO:0016021|GO:0016887|GO:0042626|GO:0042883|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF261|SM00382|SSF52540|SSF90123|TIGR02857 BPTD_RS01385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011724|IPR012994 Cyd operon protein YbgT|Membrane bound YbgT-like PF08173|TIGR02106 BPTD_RS01390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PIRSF000267|PTHR30365|PTHR30365:SF6|TIGR00203 BPTD_RS01395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PTHR30365|PTHR30365:SF0 BPTD_RS01400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011991|IPR026282 DNA-binding protein, MJ1563 type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12802|PIRSF006707|PTHR38465|SSF46785 BPTD_RS01405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010917 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|PF00593|PS01156|PTHR32552|PTHR32552:SF10|SSF56935 BPTD_RS01410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR009075 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal GO:0003995|GO:0016627|GO:0055114 G3DSA:1.20.140.10|PF00441|PS00073|PTHR10909|PTHR10909:SF262|SSF47203 BPTD_RS01420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS01425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS01430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF27|SSF56235|TIGR00066 BPTD_RS01435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30427|PTHR30427:SF1|SSF46785|SSF53850 BPTD_RS01440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS01445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547|PTHR31752|PTHR31752:SF13 BPTD_RS01450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF1|SSF48557|TIGR00979 BPTD_RS01455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|PTHR33540|PTHR33540:SF2|SSF52540|TIGR00150 BPTD_RS01460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002508|IPR021731 AMIN domain|Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|PF11741|PTHR30404|PTHR30404:SF0|SM00646|SSF53187 BPTD_RS01465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353|PTHR30353:SF0 BPTD_RS01470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|PTHR10073|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 BPTD_RS01475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|SSF52540|TIGR00174 BPTD_RS01480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|PTHR10520|SSF55326|SSF56042|TIGR00878 BPTD_RS01485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR013317|IPR017788|IPR027417 AAA+ ATPase domain|Chromosomal replication initiator protein DnaA|DnaA regulatory inactivator Hda|P-loop containing nucleoside triphosphate hydrolase GO:0032297 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00308|PTHR30050|PTHR30050:SF5|SM00382|SSF52540|TIGR03420 BPTD_RS01490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006383|IPR006385|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial GO:0008152|GO:0016791 G3DSA:1.20.1440.100|G3DSA:3.40.50.1000|PF12710|PTHR10000|PTHR10000:SF10|SSF56784|TIGR01488|TIGR01490 BPTD_RS01495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002646|IPR010206|IPR025866|IPR032828 Poly A polymerase, head domain|Poly(A) polymerase I|Polymerase A arginine-rich C-terminal domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0004652|GO:0006378|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_00957|PF01743|PF12626|PF12627|PTHR13734|PTHR13734:SF47|SSF81301|SSF81891|TIGR01942 BPTD_RS01500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PS00794|PTHR20941|SSF55083|TIGR01498 BPTD_RS01505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS01520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PTHR33376|SSF53850 BPTD_RS01525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS01530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PTHR22981|SSF48179|SSF51735 BPTD_RS01535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|PTHR33570|PTHR33570:SF3|SSF69118 BPTD_RS01545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24321|PTHR24321:SF6|SSF51735 BPTD_RS01550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001155|IPR013785|IPR017440|IPR023753 ATP-citrate lyase/succinyl-CoA ligase, active site|Aldolase-type TIM barrel|FAD/NAD(P)-binding domain|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|G3DSA:3.50.50.60|PF00724|PS00399|PTHR22893|PTHR22893:SF29|SSF51395|SSF51905 BPTD_RS01565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|PTHR11941:SF90|SSF52096 BPTD_RS01570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PTHR10909|PTHR10909:SF305|SSF47203|SSF56645 BPTD_RS01575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 BPTD_RS01580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|PTHR31793|SSF54637 BPTD_RS01585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|PTHR11803:SF16|SSF55298 BPTD_RS01590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005646 Protein of unknown function DUF342 PF03961|PTHR38032 BPTD_RS01595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004639|IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0003824|GO:0008483|GO:0030170|GO:0033014|GO:0042286 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00375|PF00202|PS00600|PTHR11986|PTHR11986:SF5|SSF53383|TIGR00713 BPTD_RS01600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|PTHR20857|PTHR20857:SF15|SSF51391|TIGR00693 BPTD_RS01605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like G3DSA:3.40.1190.20|PF08543|PTHR20858|SSF53613 BPTD_RS01610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004039|IPR018527|IPR024922|IPR024935 Rubredoxin|Rubredoxin domain|Rubredoxin, iron-binding site|Rubredoxin-type fold GO:0005506|GO:0009055|GO:0046872 G3DSA:2.20.28.10|PF00301|PIRSF000071|PR00163|PS00202|SSF57802 BPTD_RS01615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003774 Protein of unknown function UPF0301 G3DSA:3.30.70.1300|G3DSA:3.40.1740.10|MF_00758|PF02622|PTHR30327|PTHR30327:SF1|SSF143456 BPTD_RS01620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|PTHR33317|SM00732|SSF53098|TIGR00250 BPTD_RS01625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF16|SSF53671|TIGR00670 BPTD_RS01630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11647|PTHR11647:SF70|SSF51338|SSF51556 BPTD_RS01635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|PTHR10434:SF8|SM00563|SSF69593 BPTD_RS01640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004617|IPR004843|IPR029052 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0008803|GO:0016787 G3DSA:3.60.21.10|MF_00199|PF00149|PIRSF000903|PTHR24032|PTHR24032:SF27|SSF56300|TIGR00668 BPTD_RS01645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005495|IPR030923 LPS export ABC transporter permease LptG|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|PTHR33529|TIGR04408 BPTD_RS01650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001264|IPR011812|IPR023346 Glycosyl transferase, family 51|Lysozyme-like domain|Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 G3DSA:1.10.3810.10|MF_00766|PF00912|PTHR30400|PTHR30400:SF0|SSF53955|TIGR02070 BPTD_RS01655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|SSF54909 BPTD_RS01665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801 BPTD_RS01670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS01675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|PTHR34075|PTHR34075:SF2|SSF50249 BPTD_RS01680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039 Thiolase|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PIRSF000429|PTHR18919|PTHR18919:SF108|SSF53901 BPTD_RS01685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR12553|SM00849|SSF56281 BPTD_RS01690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS01695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005119 LysR, substrate-binding G3DSA:3.40.190.10|PF03466|PTHR30126|PTHR30126:SF3|SSF53850 BPTD_RS01700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021728 Protein of unknown function DUF3300 PF11737|PTHR40269|PTHR40269:SF1 BPTD_RS01705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021556 Protein of unknown function DUF2950 PF11453 BPTD_RS01710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF774|SM00267|SSF55073|TIGR00254 BPTD_RS01715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001497|IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PS00374|PTHR10815|PTHR10815:SF5|SSF46767|SSF53155|TIGR00589 BPTD_RS01720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004574|IPR027450 Alkylated DNA repair protein AlkB|Alpha-ketoglutarate-dependent dioxygenase AlkB-like GO:0006281|GO:0055114 G3DSA:2.60.120.590|PF13532|PTHR16557|SSF51197 BPTD_RS01725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018655 Protein of unknown function DUF2086 PF09859 BPTD_RS01730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007553 Domain of unknown function DUF523 PF04463|PTHR30087|PTHR30087:SF1 BPTD_RS01735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF558|SM00382|SSF52540 BPTD_RS01740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF3|SSF81345 BPTD_RS01745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|PTHR30535:SF4|SSF53807 BPTD_RS01750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 G3DSA:3.40.1570.10|PF05171|SSF144064 BPTD_RS01755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010949|IPR011276|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent haem/haemoglobin receptor|TonB-dependent haemoglobin/transferrin/lactoferrin receptor|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0005215|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|PTHR32552|PTHR32552:SF18|SM00965|SSF56935|TIGR01785|TIGR01786 BPTD_RS01760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006860|IPR012373|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal PF04773|PF16220|PIRSF018266|PTHR30273|PTHR30273:SF3 BPTD_RS01765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF9|SSF88659|SSF88946|TIGR02937 BPTD_RS01775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PS00197|SSF54292 BPTD_RS01785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PS00197|SSF54292 BPTD_RS01790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003462|IPR016040|IPR023401 NAD(P)-binding domain|Ornithine cyclodeaminase, N-terminal|Ornithine cyclodeaminase/mu-crystallin G3DSA:3.30.1780.10|G3DSA:3.40.50.720|PF02423|PIRSF001439|PTHR13812|PTHR13812:SF19|SSF51735 BPTD_RS01795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS01805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BPTD_RS01815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016084|IPR028201 Haem oxygenase-like, multi-helical|PqqC-like protein G3DSA:1.20.910.10|PF14518|PTHR40279|SM01236|SSF48613 BPTD_RS01820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF200|SSF53720 BPTD_RS01825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005624 Haem-degrading PF03928|PTHR34309|PTHR34309:SF1|SSF143744 BPTD_RS01830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR001221|IPR001433|IPR001709|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PS00197|PTHR19370|SSF52343|SSF54292|SSF63380 BPTD_RS01835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BPTD_RS01840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011045|IPR015943|IPR019405 Lactonase, 7-bladed beta propeller|Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF10282|PTHR13833|SSF50974 BPTD_RS01845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|SSF52402 BPTD_RS01855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005115 Uncharacterised domain UPF0126 PF03458|PTHR30506|PTHR30506:SF2 BPTD_RS01860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:1.10.285.10|G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|PTHR11606|PTHR11606:SF4|SM00839|SSF51735|SSF53223 BPTD_RS01865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004808|IPR005135|IPR020847 AP endonuclease 1|AP endonuclease 1, binding site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|PTHR22748|SSF56219|TIGR00195|TIGR00633 BPTD_RS01870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|PTHR19278|PTHR19278:SF36|SSF53271|TIGR00336 BPTD_RS01875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003789|IPR004413|IPR006075|IPR017958|IPR017959|IPR018027|IPR023168 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016874|GO:0016884 G3DSA:1.10.10.410|MF_00121|PF02637|PF02934|PS01234|PTHR11659|PTHR11659:SF0|SM00845|SSF55931|SSF89095|TIGR00133 BPTD_RS01880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR004412|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0016884 G3DSA:3.90.1300.10|MF_00120|PF01425|PS00571|PTHR11895|PTHR11895:SF7|SSF75304|TIGR00132 BPTD_RS01885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MF_00122|PF02686|PTHR15004|PTHR15004:SF0|SSF141000|TIGR00135 BPTD_RS01890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|PTHR19375|PTHR19375:SF117|SSF53067|TIGR00904 BPTD_RS01895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 PF04085|PIRSF038471|PTHR34138|PTHR34138:SF1|TIGR00219 BPTD_RS01900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007227|IPR026034 Cell shape-determining protein MreD|Cell shape-determining protein MreD, proteobacterial type GO:0008360|GO:0016021 PF04093|PIRSF018472|PTHR37484|TIGR03426 BPTD_RS01905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001460|IPR005311|IPR012338|IPR017790 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658|GO:0016020 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF2|SSF56519|SSF56601|TIGR03423 BPTD_RS01910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001182|IPR011923|IPR018365 Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Rod shape-determining protein RodA GO:0007049|GO:0008360|GO:0016021|GO:0051301 PF01098|PS00428|PTHR30474|PTHR30474:SF1|TIGR02210 BPTD_RS01915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|PTHR11091|SSF89733 BPTD_RS01920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001898|IPR030676 Citrate carrier CitT-related|Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|PIRSF002457|PTHR10283|PTHR10283:SF82|TIGR00785 BPTD_RS01925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|PTHR30055:SF58|SSF46689|SSF48498 BPTD_RS01930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006439|IPR010237|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Pyrimidine 5-nucleotidase GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR12725|SSF56784|TIGR01509|TIGR01993 BPTD_RS01935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001048|IPR001057|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526|GO:0006561 G3DSA:3.40.1160.10|MF_00082_B|PF00696|PIRSF000728|PR00474|PTHR23342|SSF53633|TIGR00761 BPTD_RS01940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|PTHR30429|PTHR30429:SF0|SSF53850|TIGR00363 BPTD_RS01945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|PTHR10681|PTHR10681:SF107|SSF52833 BPTD_RS01950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|PTHR34606:SF4|SM00749 BPTD_RS01955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001347|IPR004515 Phosphoheptose isomerase|Sugar isomerase (SIS) GO:0005737|GO:0005975|GO:0008968|GO:0030246 G3DSA:3.40.50.10490|MF_00067|PF13580|PTHR30390|PTHR30390:SF6|SSF53697 BPTD_RS01960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003509|IPR011856 Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|PF02021|PTHR34039|PTHR34039:SF1 BPTD_RS01965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|PTHR21091|PTHR21091:SF18|SSF53790|TIGR00096 BPTD_RS01970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001497|IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PS00374|PTHR10815|PTHR10815:SF5|SSF46767|SSF53155|TIGR00589 BPTD_RS01975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS01985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002109|IPR012336 Glutaredoxin|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PTHR34386|PTHR34386:SF1|SSF52833 BPTD_RS01990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS01995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS02000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS02005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BPTD_RS02010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|SSF52821 BPTD_RS02015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001307|IPR001763 Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|PTHR12231|PTHR12231:SF83|SM00450|SSF52821 BPTD_RS02020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF4|SM00346|SSF46785|SSF55781 BPTD_RS02025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905|TIGR01292 BPTD_RS02035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064|IPR029044 Bordetella uptake gene|Nucleotide-diphospho-sugar transferases GO:0030288 G3DSA:3.90.550.10|PF03401|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS02045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096 BPTD_RS02050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS02055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|SSF52467|SSF52518 BPTD_RS02060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30427|SSF46785|SSF53850 BPTD_RS02065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR12231|PTHR12231:SF83|SM00450|SSF52821 BPTD_RS02070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS02075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BPTD_RS02080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS02085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF9|SSF103481 BPTD_RS02095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PTHR30086|PTHR30086:SF12 BPTD_RS02100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR022742|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PR00111|PTHR12277|SSF53474 BPTD_RS02105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007896 Chlorhexidine efflux transporter PF05232|PTHR42641|PTHR42641:SF2 BPTD_RS02110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002509|IPR006879|IPR011330 Chitooligosaccharide deacetylase ChbG-like|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF04794|PTHR31609|SSF88713 BPTD_RS02115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PF13231|PTHR33908|PTHR33908:SF3 BPTD_RS02120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF86|SSF53448 BPTD_RS02125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BPTD_RS02130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PF03616|PTHR36178|PTHR36178:SF1|TIGR00210 BPTD_RS02140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|PTHR30024|PTHR30024:SF13|SSF53850|TIGR02122 BPTD_RS02145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006160 Short chain fatty acid transporter AtoE PF02667|PTHR41983|PTHR41983:SF2 BPTD_RS02160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006054|IPR006309|IPR012337|IPR013520 DNA polymerase 3, epsilon subunit|DNA polymerase III, epsilon subunit|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.30.420.10|PF00929|PTHR30231|PTHR30231:SF0|SM00479|SSF53098|TIGR00573|TIGR01406 BPTD_RS02165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF14|SSF82693|SSF82714|SSF82866 BPTD_RS02170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000795|IPR005225|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain GO:0003924|GO:0005525 G3DSA:3.40.50.300|PF00009|PR00315|PS00301|PTHR23115|PTHR23115:SF66|SSF52540|TIGR00231 BPTD_RS02180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF45|SSF52402 BPTD_RS02185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005939|IPR029021 Beta-lactamase hydrolase-like|Protein-tyrosine phosphatase-like GO:0016787 G3DSA:3.90.190.10|PF04273|TIGR01244 BPTD_RS02190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PR00035|PTHR11751|PTHR11751:SF386|SM00345|SSF46785|SSF53383 BPTD_RS02195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000640|IPR004161|IPR004540|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00484 BPTD_RS02200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PF02308|PR01837|PTHR33778 BPTD_RS02205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005496 Integral membrane protein TerC GO:0016021 PF03741|PTHR30060|PTHR30060:SF1 BPTD_RS02210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS02215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096 BPTD_RS02220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS02225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF0|SSF46785|SSF53850 BPTD_RS02230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006091|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:2.40.110.10|PF02770|PF02771|PTHR10909|PTHR10909:SF242|SSF56645 BPTD_RS02235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 G3DSA:1.20.140.10|PF00441|SSF47203 BPTD_RS02240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PTHR18919|PTHR18919:SF110|SSF53901|TIGR01930 BPTD_RS02250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|SSF46785|SSF53850 BPTD_RS02260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 BPTD_RS02270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|PTHR11751:SF436|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS02275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005931|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Delta-1-pyrroline-5-carboxylate dehydrogenase GO:0003842|GO:0006537|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|PTHR11699:SF18|SSF53720|TIGR01236 BPTD_RS02280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006160 Short chain fatty acid transporter AtoE PF02667|PTHR41983|PTHR41983:SF1 BPTD_RS02285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR001221|IPR001433|IPR006656|IPR006657|IPR006963|IPR008333|IPR009010|IPR012675|IPR017938 2Fe-2S ferredoxin-type iron-sulfur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0030151|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.30.10|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.40.50.80|PF00111|PF00175|PF00384|PF00970|PF01568|PF04879|PR00410|PTHR11615|PTHR11615:SF139|SM00926|SSF50692|SSF52343|SSF53706|SSF54292|SSF63380 BPTD_RS02290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|PTHR11803:SF6|SSF55298 BPTD_RS02295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF17|SSF46785|SSF53850 BPTD_RS02300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401 BPTD_RS02315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BPTD_RS02320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PTHR13078|SSF54637 BPTD_RS02325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|PTHR30419:SF3|SSF46785|SSF53850 BPTD_RS02330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS02335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013130|IPR022837 Ferric reductase transmembrane component-like domain|Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 MF_01207|PF01794|PTHR36964 BPTD_RS02345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000572|IPR022867 Oxidoreductase, molybdopterin-binding domain|Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0042128|GO:0043546|GO:0055114 G3DSA:3.90.420.10|MF_01206|PF00174|PTHR19372|PTHR19372:SF1|SSF56524 BPTD_RS02350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF40|SSF56784|TIGR01509|TIGR01549 BPTD_RS02355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF84|SM00363|SSF55120|SSF55174|TIGR00005 BPTD_RS02360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967|IPR028878 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396|GO:0008995 G3DSA:2.40.50.140|MF_00970|PF00575|PF10150|PTHR30001|PTHR30001:SF1|SM00316|SSF50249|TIGR00757 BPTD_RS02365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003199|IPR029055|IPR029132 Choloylglycine hydrolase/NAAA C-terminal|Choloylglycine hydrolase/Peptidase C59 family|Nucleophile aminohydrolases, N-terminal GO:0016811 G3DSA:3.60.60.10|PF02275|PTHR35527|PTHR35527:SF2|SSF56235 BPTD_RS02370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF52309 BPTD_RS02380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000422|IPR017945 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00180|PF00926|PTHR21327|PTHR21327:SF15|SSF55821|TIGR00506 BPTD_RS02385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001214 SET domain GO:0005515 G3DSA:2.170.270.10|PF00856|PTHR22884|SM00317|SSF82199 BPTD_RS02390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021134 Bestrophin/UPF0187 PF01062|PTHR33281 BPTD_RS02395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|PS00519|PTHR30154|PTHR30154:SF28|SM00344|SSF46785|SSF54909 BPTD_RS02400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF116|SSF52467|SSF52518|TIGR00118 BPTD_RS02405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24321|PTHR24321:SF6|SSF51735 BPTD_RS02410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|SSF53720 BPTD_RS02415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 BPTD_RS02420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF18|SSF161098 BPTD_RS02425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 BPTD_RS02430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850 BPTD_RS02435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000380|IPR003601|IPR003602|IPR005738|IPR006171|IPR013497|IPR013824|IPR013825|IPR023405|IPR023406|IPR025589 DNA topoisomerase III|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|Topoisomerase C-terminal repeat|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.40.50.140|PF01131|PF01751|PF13342|PR00417|PS00396|PTHR11390|SM00436|SM00437|SM00493|SSF56712|TIGR01056 BPTD_RS02440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018677|IPR025513|IPR025833 Domain of unknown function DUF2157|Domain of unknown function DUF4401|GDYXXLXY protein PF09925|PF14345|PF14351 BPTD_RS02450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007456 Smg MF_00598|PF04361|PTHR38692|PTHR38692:SF1 BPTD_RS02455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010917|IPR010949|IPR011276|IPR012910 TonB-dependent haem/haemoglobin receptor|TonB-dependent haemoglobin/transferrin/lactoferrin receptor|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain GO:0004872|GO:0005215|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|PTHR32552|PTHR32552:SF32|SSF56935|TIGR01785|TIGR01786 BPTD_RS02460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010656|IPR011853 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter, 4TM/12TM fusion protein PF06808|PTHR33362|PTHR33362:SF1|TIGR02123 BPTD_RS02465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|PTHR30024|PTHR30024:SF5|SSF53850|TIGR02122 BPTD_RS02470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001608|IPR026956|IPR029066 Alanine racemase, N-terminal|D-serine dehydratase-like domain|PLP-binding barrel G3DSA:3.20.20.10|PF01168|PF14031|PTHR28004|PTHR28004:SF3|SM01119|SSF51419 BPTD_RS02475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS02480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PS00600|PTHR11986|PTHR11986:SF88|SSF53383 BPTD_RS02485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023387 DUF1653-like domain G3DSA:2.30.30.320|PF07866 BPTD_RS02490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000089|IPR001882|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin-binding site|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF02785|PF02786|PS00188|PS00866|PS00867|PTHR18866|PTHR18866:SF102|SM00878|SM01209|SSF51230|SSF51246|SSF52440|SSF56059 BPTD_RS02495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|PTHR22855|PTHR22855:SF35|SSF52096 BPTD_RS02500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020610|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00099|PTHR18919|PTHR18919:SF110|SSF53901|TIGR01930 BPTD_RS02510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0055114 G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PS00072|PS00073|PTHR10909|PTHR10909:SF332|SSF47203|SSF56645 BPTD_RS02515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF109|SM00849|SSF56281 BPTD_RS02525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PTHR30204|PTHR30204:SF1|SM00422|SSF46955 BPTD_RS02530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|PF02771|PTHR10909|PTHR10909:SF326|SSF56645 BPTD_RS02535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.630.10|SSF53187 BPTD_RS02545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009057|IPR010499|IPR011256|IPR018060|IPR018062|IPR020449|IPR029442 Bacterial transcription activator, effector binding|DNA binding HTH domain, AraC-type|GyrI-like small molecule binding domain|HTH domain AraC-type, conserved site|Homeodomain-like|Regulatory factor, effector binding domain|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.20.80.10|PF06445|PF12833|PR00032|PS00041|PTHR40055|PTHR40055:SF1|SM00342|SM00871|SSF46689|SSF55136 BPTD_RS02550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000262|IPR008259|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|PS00557|PTHR10578|PTHR10578:SF76|SSF51395 BPTD_RS02560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS02565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site GO:0016884 G3DSA:3.90.1300.10|PF01425|PS00571|PTHR11895|PTHR11895:SF76|SSF75304 BPTD_RS02570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS02575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 BPTD_RS02580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|PTHR30478|SM00480|SSF55979|TIGR00663 BPTD_RS02585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|PTHR30050|PTHR30050:SF2|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 BPTD_RS02590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|PTHR14503|TIGR01030 BPTD_RS02595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000100|IPR014721|IPR020539|IPR020568 Ribonuclease P|Ribonuclease P, conserved site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PS00648|PTHR33992|SSF54211|TIGR00188 BPTD_RS02600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|PTHR33383|SM01234|TIGR00278 BPTD_RS02605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 G3DSA:1.20.5.540|MF_01810|PF02096|PF14849|PR00701|PR01900|PTHR12428|PTHR12428:SF14|TIGR03592|TIGR03593 BPTD_RS02610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|PTHR10204|PTHR10204:SF16|SSF52218 BPTD_RS02620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF25|SSF46785|SSF53850 BPTD_RS02625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.30.1460.10|SSF69635 BPTD_RS02630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021597 Protein of unknown function DUF3220 PF11516 BPTD_RS02635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 BPTD_RS02640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BPTD_RS02645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PF12728 BPTD_RS02670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011335|IPR011604|IPR019080 Exonuclease, phage-type/RecB, C-terminal|Restriction endonuclease type II-like|YqaJ viral recombinase GO:0003677|GO:0004518 G3DSA:3.90.320.10|PF09588|SSF52980 BPTD_RS02675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004590|IPR018330 DNA single-strand annealing protein RecT|RecT family GO:0003677|GO:0006259 PF03837|TIGR00616 BPTD_RS02700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|SSF55298 BPTD_RS02725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Thioredoxin-like fold G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF14497|PTHR11571|PTHR11571:SF139|SSF47616|SSF52833 BPTD_RS02730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001107|IPR001972 Band 7 domain|Stomatin family GO:0016020 PF01145|PTHR10264|PTHR10264:SF78|SM00244|SSF117892 BPTD_RS02735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010879 Domain of unknown function DUF1508 G3DSA:3.30.160.160|PF07411|PTHR40606|PTHR40606:SF1|SSF160113 BPTD_RS02740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001608|IPR026956|IPR029066 Alanine racemase, N-terminal|D-serine dehydratase-like domain|PLP-binding barrel G3DSA:3.20.20.10|PF01168|PF14031|PTHR28004|PTHR28004:SF2|SM01119|SSF51419 BPTD_RS02745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|PTHR12725|SSF56784|TIGR01493 BPTD_RS02750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|SSF46785|SSF53850 BPTD_RS02755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR022000 Domain of unknown function (DUF3596) PF12167 BPTD_RS02765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012556 Entericidin A/B GO:0009636|GO:0016020 PF08085 BPTD_RS02770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005546|IPR006315|IPR011050|IPR012332|IPR013425 Autotransporter beta-domain|Autotransporter-associated beta strand repeat|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03797|PF12951|PTHR35037|PTHR35037:SF3|SM00869|SSF103515|SSF51126|TIGR01414|TIGR02601 BPTD_RS02775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007247|IPR011051|IPR024060 RmlC-like cupin domain|Ureidoglycolate lyase|Ureidoglycolate lyase domain GO:0000256|GO:0004848|GO:0050385 G3DSA:2.60.120.480|PF04115|SSF51182 BPTD_RS02780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS02785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 BPTD_RS02790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS02795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096 BPTD_RS02800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|PTHR33930|PTHR33930:SF2|SSF69118|TIGR00778 BPTD_RS02805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS02810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006035|IPR014033|IPR020855|IPR023696 Arginase|Ureohydrolase|Ureohydrolase domain|Ureohydrolase, manganese-binding site GO:0004053|GO:0006525|GO:0016813|GO:0046872 G3DSA:3.40.800.10|PF00491|PIRSF036979|PR00116|PS01053|PTHR11358|PTHR11358:SF2|SSF52768|TIGR01229 BPTD_RS02820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005814|IPR010164|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Ornithine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01689|PF00202|PS00600|PTHR11986|PTHR11986:SF18|SSF53383|TIGR01885 BPTD_RS02825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|PTHR11751:SF436|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS02835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS02840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PR00420|PTHR13847|PTHR13847:SF190|SSF51905 BPTD_RS02845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.20|PF01361|SSF55331 BPTD_RS02850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF57|SM00729|SSF102114|TIGR00089|TIGR01125 BPTD_RS02855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002024|IPR008331|IPR009078|IPR012347|IPR014490 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain|Uncharacterised conserved protein UCP018063, ferritin fold GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF018063|PR00601|PTHR30295|PTHR30295:SF1|SSF47240 BPTD_RS02860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF0|SSF102405|TIGR00730 BPTD_RS02865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|SSF54427 BPTD_RS02870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF41|SSF56784 BPTD_RS02875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011576|IPR012349|IPR024029 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxamine 5-phosphate oxidase, FMN-dependent GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PTHR30212|PTHR30212:SF4|SSF50475|TIGR04025 BPTD_RS02880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001555|IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PS00373|PTHR11138|SSF50486|SSF53328|TIGR00460 BPTD_RS02885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|PTHR10458:SF10|SSF56420|TIGR00079 BPTD_RS02890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000192|IPR010111|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Kynureninase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01970|PF00266|PIRSF038800|PTHR14084|SSF53383|TIGR01814 BPTD_RS02895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|PTHR30154|PTHR30154:SF28|SM00344|SSF46785|SSF54909 BPTD_RS02900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003488 DNA recombination-mediator protein A GO:0009294 G3DSA:3.40.50.450|PF02481|PTHR32039|PTHR32039:SF8|SSF102405|TIGR00732 BPTD_RS02905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000891|IPR013785 Aldolase-type TIM barrel|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|PTHR10277|PTHR10277:SF40|SSF51569 BPTD_RS02915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|PTHR30085|PTHR30085:SF5|SM00062|SSF53850 BPTD_RS02920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF386|SSF53383 BPTD_RS02925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011078|IPR029066 PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PTHR10146|SSF51419 BPTD_RS02930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS02935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007410 DR1885-like metal-binding protein PF04314|PTHR36302|PTHR36302:SF1|SSF110087 BPTD_RS02940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991|IPR017685 HTH-type transcriptional regulator ArgP|LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30579|PTHR30579:SF2|SSF46785|SSF53850|TIGR03298 BPTD_RS02945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PTHR30086|PTHR30086:SF0 BPTD_RS02950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS02955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025870|IPR029068 Glyoxalase-like domain|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13468|SSF54593 BPTD_RS02960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002811|IPR005106|IPR011182|IPR016040|IPR020626 Aspartate dehydrogenase|Aspartate/homoserine dehydrogenase, NAD-binding|L-aspartate dehydrogenase|L-aspartate dehydrogenase, prokaryotic|NAD(P)-binding domain GO:0006742|GO:0009435|GO:0016491|GO:0019363|GO:0033735|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01265|PF01958|PF03447|PIRSF005227|PTHR31873|SSF51735|SSF55347 BPTD_RS02965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324|PTHR30086 BPTD_RS02970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001678|IPR004573|IPR006027|IPR018314|IPR023267|IPR029063 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type|rRNA small subunit methyltransferase B GO:0003723|GO:0006355|GO:0006364|GO:0008168|GO:0008649 G3DSA:1.10.287.730|G3DSA:1.10.940.10|G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01189|PR02008|PS01153|PTHR22807|PTHR22807:SF30|SSF48013|SSF53335|TIGR00563 BPTD_RS02975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025500 Protein of unknown function DUF4390 PF14334 BPTD_RS02980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR013656|IPR017232 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, nitrogen fixation and metabolism regulator|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF08448|PIRSF037532|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874 BPTD_RS02985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR009057|IPR011006 CheY-like superfamily|Homeodomain-like|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PTHR32071|PTHR32071:SF17|SM00448|SSF46689|SSF52172 BPTD_RS02990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003148|IPR006036|IPR006037|IPR016040 NAD(P)-binding domain|Potassium uptake protein TrkA|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0005886|GO:0006813|GO:0008324|GO:0015079 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02080|PF02254|PR00335|PTHR13789|PTHR13789:SF225|SSF116726|SSF51735 BPTD_RS02995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003445|IPR004772 Cation transporter|TrkH potassium transport family GO:0006812|GO:0008324|GO:0016021|GO:0022820|GO:0055085|GO:0071805 PF02386|PIRSF006247|PTHR32024|PTHR32024:SF2 BPTD_RS03000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|PTHR33164:SF16|SM00347|SSF46785 BPTD_RS03005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003777|IPR016185|IPR027051 Pre-ATP-grasp domain|XdhC Rossmann domain|XdhC- CoxI G3DSA:3.40.50.20|PF02625|PF13478|PTHR30388|PTHR30388:SF4 BPTD_RS03010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025877|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF12804|PTHR19136|PTHR19136:SF78|SSF53448 BPTD_RS03015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|PTHR21240|PTHR21240:SF14|SSF51556 BPTD_RS03020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR026286|IPR028615 Maleate isomerase|Maleate isomerase/Arylmalonate decarboxylase GO:0050076 MF_00943|PIRSF015736|PTHR40267 BPTD_RS03025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PTHR10992|SSF53474 BPTD_RS03030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF144052 BPTD_RS03035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF38|SSF52499 BPTD_RS03040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 BPTD_RS03045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001663|IPR015879|IPR015881|IPR017941 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016705|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|PS00570|PTHR21266|SSF50022|SSF55961 BPTD_RS03050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004099|IPR016156|IPR023753|IPR028202 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Reductase, C-terminal GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF07992|PF14759|PR00368|PR00411|PTHR22912|PTHR22912:SF180|SSF51905|SSF55424 BPTD_RS03055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21496|SSF50022 BPTD_RS03060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026|PTHR33376|PTHR33376:SF5 BPTD_RS03065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF76|SM01008|SSF54665|SSF56003 BPTD_RS03070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PTHR11908|PTHR11908:SF68|SSF55447|SSF56176 BPTD_RS03075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR002888|IPR006058|IPR010419|IPR012675|IPR023393 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Carbon monoxide dehydrogenase subunit G|START-like domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|G3DSA:3.30.530.20|PF00111|PF01799|PF06240|PS00197|PTHR11908|PTHR11908:SF2|SSF47741|SSF54292|SSF55961 BPTD_RS03080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168|IPR027939 NMT1/THI5 family|SsuA/THI5-like GO:0009228 G3DSA:3.40.190.10|PF09084|PTHR31528|SSF53850 BPTD_RS03085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF454|SM00382|SSF52540 BPTD_RS03090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|SSF161098 BPTD_RS03095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011|PTHR35011:SF4 BPTD_RS03100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808|PTHR33362|PTHR33362:SF7 BPTD_RS03105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006336|IPR011793 Glutamate--cysteine ligase, GCS2|Putative glutamate--cysteine ligase YbdK GO:0004357|GO:0016879|GO:0042398 MF_01609|PF04107|PTHR36510|PTHR36510:SF1|SSF55931|TIGR02050 BPTD_RS03110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011814|IPR013216|IPR029063 Malonyl-[acyl-carrier protein] O-methyltransferase BioC|Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168|GO:0009102|GO:0010340 G3DSA:3.40.50.150|MF_00835|PF08241|PTHR13090|PTHR13090:SF3|SSF53335 BPTD_RS03115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR11907|PTHR11907:SF9|SSF53271 BPTD_RS03120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|PTHR12029|PTHR12029:SF31|SSF75217 BPTD_RS03125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS03130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|PTHR11728|SSF48179|SSF51735 BPTD_RS03135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 G3DSA:3.10.420.10|MF_00821|PF02556|PR01594|PTHR36918|PTHR36918:SF1|SSF54611|TIGR00809 BPTD_RS03140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002109|IPR011767|IPR011900|IPR012336|IPR014025 Glutaredoxin|Glutaredoxin active site|Glutaredoxin subgroup|Glutaredoxin, GrxC|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PR00160|PS00195|PTHR10168|SSF52833|TIGR02181 BPTD_RS03145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR12231|PTHR12231:SF138|SM00450|SSF52821 BPTD_RS03150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PS00175|PTHR11931|SM00855|SSF53254|TIGR01258 BPTD_RS03155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|PTHR21666:SF213|SSF51261 BPTD_RS03160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF00595|PF03572|PTHR32060|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 BPTD_RS03165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF158|SSF69572 BPTD_RS03170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS03180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF8|SM00346|SSF46785|SSF55781 BPTD_RS03190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS03195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|PTHR21240|SSF51556 BPTD_RS03200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PS01081|PTHR30055|SSF46689|SSF48498 BPTD_RS03205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF160|SSF51905|SSF55424|TIGR01350 BPTD_RS03210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS03215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851|IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter, permease|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS03220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF398 BPTD_RS03225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|SSF53822 BPTD_RS03230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS03235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 BPTD_RS03240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00073|PTHR10909|PTHR10909:SF241|SSF47203|SSF56645 BPTD_RS03245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000089|IPR001078|IPR003016|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Single hybrid motif GO:0008152|GO:0016746 G3DSA:2.40.50.100|G3DSA:3.30.559.10|PF00198|PF00364|PS00189|PTHR23151|SSF51230|SSF52777 BPTD_RS03250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096 BPTD_RS03255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005475|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|PTHR11624|SM00861|SSF52518|SSF52922 BPTD_RS03260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001017|IPR029061 Dehydrogenase, E1 component|Thiamin diphosphate-binding fold GO:0008152|GO:0016624 G3DSA:3.40.50.970|PF00676|PTHR11516|SSF52518 BPTD_RS03265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF7|SM00346|SSF46785|SSF55781 BPTD_RS03270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR003781|IPR016040|IPR016102|IPR029045|IPR032875 ClpP/crotonase-like domain|CoA-binding|Crotonase superfamily|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF13380|PF13549|PF13607|PTHR33303|PTHR33303:SF3|SM00881|SSF51735|SSF52096|SSF52210|SSF56059 BPTD_RS03275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS03280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PTHR10909|SSF47203|SSF56645 BPTD_RS03285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096 BPTD_RS03290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020616 Thiolase|Thiolase, N-terminal|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PIRSF000429|PTHR18919|PTHR18919:SF108|SSF53901 BPTD_RS03295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|PTHR34075|PTHR34075:SF2|SSF50249 BPTD_RS03305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PTHR13078|SSF54637 BPTD_RS03310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00073|PTHR10909|PTHR10909:SF227|SSF47203|SSF56645 BPTD_RS03315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS03320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS03325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30427|SSF46785|SSF53850 BPTD_RS03330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PTHR12128|PTHR12128:SF29|SM01130|SSF51569 BPTD_RS03335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002840|IPR008279|IPR012016|IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel|Domain of unknown function DUF126|PEP-utilising enzyme, mobile domain|Uncharacterised protein family UPF0107 GO:0016310|GO:0016772 G3DSA:3.50.30.10|PF01989|PIRSF004966|PTHR36577|SSF52016 BPTD_RS03350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007506 Domain of unknown function DUF521 PF04412|PTHR36577|PTHR36577:SF1 BPTD_RS03355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS03360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF3|SSF46785|SSF53850 BPTD_RS03365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006094|IPR012256|IPR015409|IPR016164|IPR016166|IPR016167|IPR016169|IPR016172|IPR016173 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|D-lactate dehydrogenase|D-lactate dehydrogenase, C-terminal subdomain 1|D-lactate dehydrogenase, C-terminal subdomain 2|D-lactate dehydrogenase, membrane binding, C-terminal|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0004457|GO:0005887|GO:0006089|GO:0016491|GO:0016614|GO:0050660|GO:0051287|GO:0055085|GO:0055114 G3DSA:3.30.1370.20|G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.30.70.610|PF01565|PF09330|PIRSF000101|PTHR11748|PTHR11748:SF82|SSF55103|SSF56176 BPTD_RS03370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PTHR10909|PTHR10909:SF145|SSF47203|SSF56645 BPTD_RS03375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PTHR10909|PTHR10909:SF229|SSF47203|SSF56645 BPTD_RS03380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS03385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001261|IPR002933|IPR010169|IPR011650 Acetylornithine deacetylase (ArgE)|ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain GO:0005737|GO:0006508|GO:0006526|GO:0008152|GO:0008237|GO:0008270|GO:0008777|GO:0016787|GO:0050897 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PS00759|PTHR11014|PTHR11014:SF80|SSF53187|SSF55031|TIGR01892 BPTD_RS03390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010430|IPR029055 Nucleophile aminohydrolases, N-terminal|Protein of unknown function DUF1028 G3DSA:3.60.20.10|PF06267|PTHR39328|PTHR39328:SF1|SSF56235 BPTD_RS03395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|SSF55298 BPTD_RS03400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|PR00368|PR00411|PTHR23023|PTHR23023:SF4|SSF51905 BPTD_RS03405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR011032|IPR013149|IPR014188|IPR016040|IPR020843 Acrylyl-CoA reductase AcuI|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PTHR11695|PTHR11695:SF13|SM00829|SSF50129|SSF51735|TIGR02823 BPTD_RS03410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30346|SSF46785|SSF53850 BPTD_RS03415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003781|IPR013815|IPR016040|IPR016102|IPR032875 ATP-grasp fold, subdomain 1|CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0003824|GO:0005524|GO:0048037 G3DSA:3.30.1490.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|PTHR33303|PTHR33303:SF3|SM00881|SSF51735|SSF52210|SSF56059 BPTD_RS03420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096 BPTD_RS03425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850 BPTD_RS03430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS03435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|SSF51735 BPTD_RS03440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|PTHR10937|PTHR10937:SF0|SSF53697|SSF56235|TIGR01135 BPTD_RS03445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PTHR30154|PTHR30154:SF28|SM00344|SSF46785|SSF54909 BPTD_RS03450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020613|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00737|PTHR18919|PTHR18919:SF14|SSF53901|TIGR01930 BPTD_RS03455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR029045 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|ClpP/crotonase-like domain|Crotonase superfamily|NAD(P)-binding domain GO:0003824|GO:0003857|GO:0006631|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF00725|PF02737|PTHR23309|PTHR23309:SF9|SSF48179|SSF51735|SSF52096 BPTD_RS03460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0055114 G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PS00073|PTHR10909|PTHR10909:SF262|SSF47203|SSF56645 BPTD_RS03465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS03470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003781|IPR013815|IPR016040|IPR016102|IPR032875 ATP-grasp fold, subdomain 1|CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0003824|GO:0005524|GO:0048037 G3DSA:3.30.1490.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|PTHR33303|PTHR33303:SF3|SM00881|SSF51735|SSF52210|SSF56059 BPTD_RS03475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002020|IPR016142|IPR016143 Citrate synthase|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|SSF48256 BPTD_RS03480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS03485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006656|IPR006657|IPR009010 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase GO:0016491|GO:0030151|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.90.55.10|PF00384|PF01568|PTHR11615|PTHR11615:SF19|SSF50692|SSF53706 BPTD_RS03490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000343|IPR006151|IPR015895|IPR015896|IPR016040|IPR018214 Glutamyl-tRNA reductase, conserved site|NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 G3DSA:3.40.50.720|MF_00087|PF00745|PF01488|PF05201|PIRSF000445|PS00747|PTHR21089|PTHR21089:SF3|SSF51735|SSF69075|SSF69742|TIGR01035 BPTD_RS03505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF9|SM00937|SSF75620|TIGR00019 BPTD_RS03510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002052|IPR004556|IPR007848|IPR019874|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF05175|PS00092|PTHR18895|PTHR18895:SF64|SSF53335|TIGR00536|TIGR03534 BPTD_RS03515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002109|IPR004480|IPR012336|IPR014434 Glutaredoxin|Monothiol glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PIRSF005894|PTHR10293|SSF52833|TIGR00365 BPTD_RS03520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003382|IPR004507 Flavin prenyltransferase UbiX/Pad1|Flavoprotein GO:0003824 G3DSA:3.40.50.1950|MF_01984|PF02441|PTHR30108|PTHR30108:SF10|SSF52507|TIGR00421 BPTD_RS03525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS03530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BPTD_RS03535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|PTHR11908|PTHR11908:SF68|SM01092|SSF55447|SSF56176 BPTD_RS03540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|SSF47741|SSF54292 BPTD_RS03545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF76|SM01008|SSF54665|SSF56003 BPTD_RS03550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010419|IPR023393 Carbon monoxide dehydrogenase subunit G|START-like domain G3DSA:3.30.530.20|PF06240|SSF55961 BPTD_RS03560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007730|IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain|Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF03330|PF05036|PTHR34183|PTHR34183:SF3|SSF110997|SSF50685|TIGR00413 BPTD_RS03570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005337|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RapZ-like family GO:0005524 G3DSA:3.40.50.300|MF_00636|PF03668|PIRSF005052|PTHR30448|PTHR30448:SF0|SSF52540 BPTD_RS03580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009056|IPR014353 Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000018|PTHR35008|PTHR35008:SF5|SSF46626 BPTD_RS03585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003755|IPR011104|IPR011126|IPR027417|IPR028979 HPr kinase/phosphorylase, C-terminal|HPr(Ser) kinase/phosphorylase|HPr(Ser) kinase/phosphorylase, N-terminal|HPr(Ser) kinase/phosphorylase, N-terminal domain-like|P-loop containing nucleoside triphosphate hydrolase GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 G3DSA:3.40.1390.20|G3DSA:3.40.50.300|MF_01249|PF02603|PF07475|PTHR30305|PTHR30305:SF1|SSF53795|SSF75138|TIGR00679 BPTD_RS03590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PS00372|PTHR30505|PTHR30505:SF6|SSF55804 BPTD_RS03595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 G3DSA:3.30.160.100|PF02482|PTHR33231|SSF69754|TIGR00741 BPTD_RS03600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030921|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|PTHR24220|PTHR24220:SF497|SM00382|SSF52540|TIGR04406 BPTD_RS03605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005653|IPR014340 Lipopolysaccharide export system protein LptA|Organic solvent tolerance-like, N-terminal GO:0001530|GO:0015920|GO:0042597 G3DSA:2.60.450.10|MF_01914|PF03968|PTHR36504|TIGR03002 BPTD_RS03610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PF06835|TIGR04409 BPTD_RS03615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006549|IPR010023|IPR023214 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|HAD-like domain|HAD-superfamily hydrolase,subfamily IIIA GO:0019143 G3DSA:3.40.50.1000|PF08282|PIRSF006118|PTHR21485|SSF56784|TIGR01662|TIGR01670 BPTD_RS03620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0030246 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|PTHR38418|PTHR38418:SF1|SM00116|SSF53697|TIGR00393 BPTD_RS03625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001509|IPR003135|IPR005862|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|NAD-dependent epimerase/dehydratase, N-terminal domain|Phosphoribosylglycinamide formyltransferase 2|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0000287|GO:0003824|GO:0004644|GO:0005524|GO:0009152|GO:0016742|GO:0050662 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01643|PF01370|PF02222|PTHR11609|PTHR11609:SF7|SSF51246|SSF52440|SSF56059|TIGR01142 BPTD_RS03630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF10|SSF56935 BPTD_RS03640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009978 Putative Na+/H+ antiporter PF07399 BPTD_RS03645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|PTHR34404|PTHR34404:SF2|SM00834|TIGR02605 BPTD_RS03650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007462 Protein of unknown function DUF502 PF04367|PTHR31876 BPTD_RS03655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR018150|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|PTHR22594|PTHR22594:SF5|SSF50249|SSF55261|SSF55681|TIGR00459 BPTD_RS03660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|PTHR15822|PTHR15822:SF7|SSF56219 BPTD_RS03665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001736|IPR025202|IPR030872 Cardiolipin synthase B|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0032049 G3DSA:3.30.870.10|MF_01917|PF13091|PTHR21248|PTHR21248:SF5|SM00155|SSF56024 BPTD_RS03670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF17|SSF103481 BPTD_RS03680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010419|IPR023393 Carbon monoxide dehydrogenase subunit G|START-like domain G3DSA:3.30.530.20|PF06240|PTHR38588|PTHR38588:SF1|SSF55961 BPTD_RS03685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF13714|PTHR21631|PTHR21631:SF4|SSF51621 BPTD_RS03695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009409 Protein of unknown function DUF1059 PF06348 BPTD_RS03700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF82|SSF53383 BPTD_RS03705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site GO:0016884 G3DSA:3.90.1300.10|PF01425|PS00571|PTHR11895|PTHR11895:SF84|SSF75304 BPTD_RS03710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF132|SM00382|SSF52540 BPTD_RS03715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF54|SSF161098 BPTD_RS03720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS03725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF21|SSF53850 BPTD_RS03730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS03735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009057|IPR015893 Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PTHR30055|SSF46689 BPTD_RS03740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005730|IPR009006|IPR022643|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Carboxynorspermidine decarboxylase|Orn/DAP/Arg decarboxylase 2, C-terminal|PLP-binding barrel GO:0003824 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PIRSF038941|PTHR11482|PTHR11482:SF38|SSF50621|SSF51419|TIGR01047 BPTD_RS03750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005097|IPR016040|IPR032095 NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03435|PF16653|PTHR12286|PTHR12286:SF6|SSF51735 BPTD_RS03755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007372 Lipid/polyisoprenoid-binding, YceI-like G3DSA:2.40.128.110|PF04264|PTHR34406|PTHR34406:SF1|SM00867|SSF101874 BPTD_RS03770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|PTHR32552|PTHR32552:SF17|SM00965|SSF56935|TIGR01783 BPTD_RS03775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006860|IPR012373|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal PF04773|PF16220|PIRSF018266|PTHR30273|PTHR30273:SF2 BPTD_RS03785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002052|IPR009537|IPR014455|IPR029063 DNA methylase, N-6 adenine-specific, MK1259 type|DNA methylase, N-6 adenine-specific, conserved site|Domain of unknown function DUF1156|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF06634|PIRSF009427|PS00092|SSF53335 BPTD_RS03795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40 BPTD_RS03800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR10245|SM00530|SSF47413 BPTD_RS03810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001867|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|SM00862|SSF46894 BPTD_RS03815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|PTHR11063|PTHR11063:SF6|SM00359|SSF53633|SSF88697|TIGR01027 BPTD_RS03820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417 GTP binding domain|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|PTHR11702|PTHR11702:SF3|SSF52540|SSF82051|TIGR02729 BPTD_RS03825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|PTHR15893|SSF110324|TIGR00062 BPTD_RS03830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001787|IPR018258|IPR028909 Ribosomal protein L21|Ribosomal protein L21, conserved site|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PS01169|PTHR21349|SSF141091|TIGR00061 BPTD_RS03835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF82|SSF56529 BPTD_RS03840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF47|SSF48576 BPTD_RS03850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30427|PTHR30427:SF1|SSF46785|SSF53850 BPTD_RS03855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002821|IPR008040 Hydantoinase/oxoprolinase|Hydantoinaseoxoprolinase, N-terminal GO:0016787 G3DSA:3.30.420.190|PF01968|PF05378|PTHR11365|SSF53067 BPTD_RS03860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003692 Hydantoinase B/oxoprolinase GO:0003824 PF02538|PTHR11365 BPTD_RS03865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|SSF51905 BPTD_RS03870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS03875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010102|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Succinate semialdehyde dehydrogenase GO:0008152|GO:0009013|GO:0009450|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF49|SSF53720|TIGR01780 BPTD_RS03880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 PF02794|PR01489 BPTD_RS03890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001343|IPR003995|IPR005165|IPR011049|IPR018504|IPR018511 Anthrax toxin, edema factor, central|Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|RTX N-terminal|RTX toxin determinant A|Serralysin-like metalloprotease, C-terminal GO:0005509|GO:0005576|GO:0008294|GO:0009405 G3DSA:2.150.10.10|PF00353|PF02382|PF03497|PR00313|PR01488|PS00330|SSF51120|SSF81298 BPTD_RS03895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR005074|IPR010132|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, HlyB|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|PTHR24221|PTHR24221:SF246|SM00382|SSF52540|SSF90123|TIGR01846 BPTD_RS03900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003997|IPR006144|IPR010129 RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PS00543|PTHR30386|PTHR30386:SF8|TIGR01843 BPTD_RS03905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003423|IPR028351 Cyclolysin transport protein CyaE|Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PIRSF001892|PTHR30203|SSF56954 BPTD_RS03910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF2|SSF46785|SSF53850 BPTD_RS03915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR30085|PTHR30085:SF2|SM00062|SSF53850 BPTD_RS03925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065|IPR030205 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Glutamate/aspartate transport system permease protein GltK/AatM GO:0005215|GO:0006810|GO:0006865|GO:0016020|GO:0016021|GO:0043190 G3DSA:1.10.3720.10|PF00528|PTHR30614|PTHR30614:SF1|SSF161098|TIGR01726 BPTD_RS03930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030206|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|Glutamate/aspartate transport ATP-binding protein GltL/AatP|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0006865|GO:0015424|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF317|SM00382|SSF52540 BPTD_RS03935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|PTHR11825:SF38|SSF56752 BPTD_RS03945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS03950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|SSF51735 BPTD_RS03955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|SSF52467|SSF52518 BPTD_RS03960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|PTHR11751:SF356|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS03965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005546|IPR006315 Autotransporter beta-domain|Outer membrane autotransporter barrel GO:0019867 G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|TIGR01414 BPTD_RS03970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF395|SM00895|SSF46785|SSF48008 BPTD_RS03975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|SM00829|SSF50129|SSF51735 BPTD_RS03980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801 BPTD_RS03985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021259 Protein of unknown function DUF2817 G3DSA:3.40.630.10|PF10994|SSF53187 BPTD_RS03990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF21|SSF161098 BPTD_RS03995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 BPTD_RS04000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168|IPR027939 NMT1/THI5 family|SsuA/THI5-like GO:0009228 G3DSA:3.40.190.10|PF09084|PTHR31528|SSF53850 BPTD_RS04005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025870|IPR029068 Glyoxalase-like domain|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13468|SSF54593 BPTD_RS04010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|SSF52467|SSF52518 BPTD_RS04015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006685|IPR010920|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal GO:0016020|GO:0055085 G3DSA:2.30.30.60|PF00924|PTHR30566|SSF50182|SSF82689 BPTD_RS04020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032692 Integral membrane protein YccS, N-terminal PF12805 BPTD_RS04030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF116|SSF52467|SSF52518|TIGR00118 BPTD_RS04035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004789|IPR019455 Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|PTHR30239|SSF55021|TIGR00119 BPTD_RS04040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040|IPR023753 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|FAD/NAD(P)-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.50.50.60|MF_00435|PF01450|PF07991|PTHR21371|SSF48179|SSF51735|TIGR00465 BPTD_RS04045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|PTHR15362|TIGR00473 BPTD_RS04055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|PTHR23321|SM01387|SSF47060|TIGR00952 BPTD_RS04060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|PTHR11252|PTHR11252:SF0|SM00316|SM00322|SSF46915|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 BPTD_RS04070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001926|IPR005789 Threonine dehydratase, catabolic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006567 G3DSA:3.30.70.260|G3DSA:3.40.50.1100|PF00291|PTHR10314|PTHR10314:SF17|SSF53686|TIGR01127 BPTD_RS04080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002716 PIN domain PF13470 BPTD_RS04090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR014189|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase PIG3 GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF610|SM00829|SSF50129|SSF51735|TIGR02824 BPTD_RS04095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|PTHR21139|SSF51351|TIGR00419 BPTD_RS04100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|PTHR34182|TIGR00810 BPTD_RS04110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PF02028|PTHR30047|PTHR30047:SF6|TIGR00842 BPTD_RS04115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS04120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001354|IPR006395|IPR022662|IPR022665|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase|Methylaspartate ammonia-lyase|Methylaspartate ammonia-lyase, C-terminal|Methylaspartate ammonia-lyase, N-terminal GO:0003824|GO:0008152|GO:0050096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF05034|PF07476|PIRSF017107|PTHR13794|PTHR13794:SF57|SSF51604|SSF54826|TIGR01502 BPTD_RS04125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS04130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS04135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008948 L-Aspartase-like GO:0003824 SSF48557 BPTD_RS04140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000362|IPR008948|IPR009049|IPR022761|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF14698|PR00145|PR00149|PTHR11444|PTHR11444:SF3|SSF48557 BPTD_RS04145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS04150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS04155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24319|PTHR24319:SF23|SSF51735 BPTD_RS04160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF4|SSF46785|SSF53850 BPTD_RS04165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000277|IPR006233|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF45|SSF53383|TIGR01324 BPTD_RS04170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 G3DSA:3.40.630.10|PF04952|PIRSF039012|PTHR37326|PTHR37326:SF1|SSF53187 BPTD_RS04175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS04180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001763|IPR011051|IPR014710 Rhodanese-like domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|G3DSA:3.40.250.10|PF00581|PTHR12231|PTHR12231:SF83|SM00450|SSF51182|SSF52821 BPTD_RS04185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS04190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PR00420|PTHR13847|PTHR13847:SF210|SSF51905 BPTD_RS04195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003692 Hydantoinase B/oxoprolinase GO:0003824 PF02538|PTHR11365 BPTD_RS04200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002821|IPR008040 Hydantoinase/oxoprolinase|Hydantoinaseoxoprolinase, N-terminal GO:0016787 PF01968|PF05378|PTHR11365|SSF53067 BPTD_RS04205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR029016 GAF domain-like|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS04210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000923|IPR008972|IPR014068|IPR028871 Azurin, proteobacteria|Blue (type 1) copper domain|Blue (type 1) copper protein, binding site|Cupredoxin GO:0005507|GO:0009055 G3DSA:2.60.40.420|PD003655|PF00127|PS00196|PTHR38439|PTHR38439:SF2|SSF49503|TIGR02695 BPTD_RS04215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005149|IPR011991 Transcription regulator PadR, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03551|PTHR30363|PTHR30363:SF9|SSF46785 BPTD_RS04220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PTHR30203|PTHR30203:SF13|SSF56954|TIGR01845 BPTD_RS04225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|PTHR32063|PTHR32063:SF28|SSF82693|SSF82714|SSF82866 BPTD_RS04230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF5|SSF111369|TIGR01730 BPTD_RS04235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002577|IPR003033|IPR011991|IPR029229 Alkyl sulfatase, C-terminal|Helix-turn-helix, HxlR type|SCP2 sterol-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.1050.10|PF01638|PF14864|PTHR33204|PTHR33204:SF9|SSF46785|SSF55718 BPTD_RS04240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000060|IPR018093 BCCT transporter family|BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PF02028|PS01303|PTHR30047|PTHR30047:SF2|TIGR00842 BPTD_RS04250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF33|SSF46785|SSF53850 BPTD_RS04255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001206|IPR016064|IPR017438 Diacylglycerol kinase, catalytic domain|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0008152|GO:0016301 G3DSA:3.40.50.10330|PF00781|PTHR12358|SSF111331 BPTD_RS04260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR12905|PTHR12905:SF17|SSF56300 BPTD_RS04265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|PTHR14969|SM00014|SSF48317 BPTD_RS04270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006115|IPR016040 6-phosphogluconate dehydrogenase, NADP-binding|NAD(P)-binding domain GO:0004616|GO:0055114 G3DSA:3.40.50.720|PF03446|SSF51735 BPTD_RS04275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR12418|PTHR12418:SF30|SSF54637|TIGR00369 BPTD_RS04280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30328|PTHR30328:SF11|SSF46689 BPTD_RS04285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001702|IPR002299|IPR023614 Porin domain|Porin, Gram-negative type|Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 G3DSA:2.40.160.10|PF13609|PR00182|PR00184|SSF56935 BPTD_RS04295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000440|IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 MF_01394|PF00507|PTHR11058|PTHR11058:SF10 BPTD_RS04300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.700|MF_01356|PF01058|PS01150|PTHR11995|PTHR11995:SF19|SSF56770|TIGR01957 BPTD_RS04305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001268|IPR010218|IPR020396 NADH dehydrogenase, subunit C|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0008137|GO:0016651|GO:0055114 MF_01357|PD001581|PF00329|PS00542|PTHR10884|SSF143243|TIGR01961 BPTD_RS04310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001135|IPR014029|IPR022885|IPR029014 NAD(P)H-quinone oxidoreductase subunit D/H|NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site|NiFe hydrogenase-like GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.10|MF_01358|PF00346|PS00535|PTHR11993|PTHR11993:SF10|SSF56762|TIGR01962 BPTD_RS04315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PIRSF000216|PTHR10371|PTHR10371:SF3|SSF52833|TIGR01958 BPTD_RS04320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001949|IPR011537|IPR011538|IPR019554|IPR019575 NADH ubiquinone oxidoreductase, F subunit|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain GO:0008137|GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 PF01512|PF10531|PF10589|PS00645|PTHR11780|PTHR11780:SF10|SM00928|SSF140490|SSF142019|SSF142984|TIGR01959 BPTD_RS04325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000283|IPR001041|IPR006656|IPR006657|IPR009010|IPR010228|IPR012675|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008137|GO:0009055|GO:0016020|GO:0016491|GO:0016651|GO:0030151|GO:0042773|GO:0051536|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.40.50.740|PF00384|PF01568|PF10588|PF13510|PS00641|PS00642|PS00643|PTHR11615|PTHR11615:SF115|SM00929|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01973 BPTD_RS04330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MF_01350|PF00146|PS00668|PTHR11432|PTHR11432:SF3 BPTD_RS04335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010226|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 G3DSA:1.10.1060.10|MF_01351|PF12838|PS00198|PTHR10849|PTHR10849:SF20|SSF54862|TIGR01971 BPTD_RS04340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PF00499|PTHR33269|PTHR33269:SF1 BPTD_RS04345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420|PTHR11434|PTHR11434:SF0 BPTD_RS04350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001516|IPR001750|IPR003945|IPR018393 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PR01434|PR01435|PTHR22773|PTHR22773:SF50|TIGR01974 BPTD_RS04355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|PTHR22773|PTHR22773:SF40|TIGR01972 BPTD_RS04360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|PTHR22773|PTHR22773:SF41|TIGR01770 BPTD_RS04365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016768 Uncharacterised conserved protein UCP019883, membrane PF10993|PIRSF019883 BPTD_RS04370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR012910|IPR030148 Catecholate siderophore receptor Fiu|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0009279|GO:0015891|GO:0016020|GO:0016021 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF8|SSF56935|TIGR01783 BPTD_RS04375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR012910|IPR030148 Catecholate siderophore receptor Fiu|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0009279|GO:0015891|GO:0016020|GO:0016021 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF8|SSF56935|TIGR01783 BPTD_RS04380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|SSF55729 BPTD_RS04385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF328|SSF51735 BPTD_RS04390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|SSF52467|SSF52518 BPTD_RS04395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS04400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|PTHR30419:SF3|SSF46785|SSF53850 BPTD_RS04405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006383|IPR023190|IPR023214|IPR025138 Domain of unknown function DUF4072|HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF12710|PF13284|PTHR10000|PTHR10000:SF7|SSF56784|TIGR00338|TIGR01488 BPTD_RS04410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|PTHR14025|PTHR14025:SF21|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 BPTD_RS04415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001228|IPR018294|IPR029044 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0050518 G3DSA:3.90.550.10|MF_00108|PF01128|PS01295|PTHR32125|PTHR32125:SF4|SSF53448|TIGR00453 BPTD_RS04420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003526|IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|PTHR32125|SSF69765|TIGR00151 BPTD_RS04425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000146|IPR028343|IPR033391 Fructose-1,6-bisphosphatase|Fructose-1,6-bisphosphatase class 1|Fructose-1-6-bisphosphatase class I, N-terminal GO:0005975|GO:0042132|GO:0042578 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PIRSF500210|PR00115|PTHR11556|SSF56655 BPTD_RS04435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001930|IPR012779|IPR014782|IPR024601 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase|Peptidase M1, alanyl aminopeptidase|Peptidase M1, alanyl aminopeptidase, C-terminal|Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0006508|GO:0008237|GO:0008270 G3DSA:1.10.390.10|G3DSA:1.25.50.10|PF01433|PF11940|PR00756|PTHR11533|PTHR11533:SF152|SSF55486|SSF63737|TIGR02414 BPTD_RS04440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025411 Domain of unknown function DUF4136 PF13590 BPTD_RS04445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 BPTD_RS04455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008854|IPR022474|IPR025835|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|TPMT family|Thiopurine S-methyltransferase|Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0008757|GO:0010038|GO:0032259 G3DSA:3.40.50.150|MF_00812|PF05724|PIRSF023956|PTHR10259|PTHR10259:SF16|SSF53335|TIGR03840 BPTD_RS04460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.190.10 BPTD_RS04465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021747 Protein of unknown function DUF3313 PF11769 BPTD_RS04470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009875|IPR009926|IPR012349|IPR023787 FMN-binding split barrel|PilZ domain|Type III secretion system flagellar brake protein YcgR|Type III secretion system flagellar brake protein YcgR, N-terminal GO:0010181|GO:0016491|GO:0035438|GO:0055114|GO:0071945 G3DSA:2.30.110.10|G3DSA:2.40.10.220|MF_01457|PF07238|PF07317|SSF141371 BPTD_RS04475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 G3DSA:2.40.230.10|PF02253|PR01486|SSF56931 BPTD_RS04495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS04500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000089|IPR001249|IPR001882|IPR011053 Acetyl-CoA biotin carboxyl carrier|Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|PS00188|PTHR23151|PTHR23151:SF64|SSF51230|TIGR00531 BPTD_RS04505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000891|IPR003379|IPR013785 Aldolase-type TIM barrel|Carboxylase, conserved domain|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|PF02436|PTHR18866|PTHR18866:SF109|SSF51569|SSF89000 BPTD_RS04510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BPTD_RS04515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|PTHR21240|SSF51556 BPTD_RS04520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR32487|PTHR32487:SF0|SSF51735 BPTD_RS04525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PTHR11751|PTHR11751:SF292|SM00345|SM00866|SSF46785|SSF64288 BPTD_RS04530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|PTHR18866|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 BPTD_RS04535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|PTHR22855|PTHR22855:SF14|SSF52096 BPTD_RS04540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF07221|PTHR15108|SSF48208 BPTD_RS04570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR40261|PTHR40261:SF2|SSF50022 BPTD_RS04580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF250|SM00382|SSF52540|SSF90123 BPTD_RS04585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001395|IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00063|PS00798|PTHR11732|SSF51430 BPTD_RS04590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|SSF51430 BPTD_RS04600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219|PTHR34219:SF3 BPTD_RS04605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR24032|SSF56300 BPTD_RS04610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001264|IPR001460|IPR012338|IPR012340|IPR023346|IPR031376 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Nucleic acid-binding, OB-fold|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:2.40.50.140|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601|TIGR02074 BPTD_RS04615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001375|IPR015943|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0006508|GO:0008236 G3DSA:2.130.10.10|G3DSA:3.40.50.1820|PF00326|PTHR11731|PTHR11731:SF140|SSF50993|SSF53474 BPTD_RS04620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR12418|SSF54637|TIGR00369 BPTD_RS04625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001126|IPR017961|IPR022880|IPR024728 DNA polymerase IV|DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11798|PF11799|PTHR11076|SSF100879|SSF56672 BPTD_RS04630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012001|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 G3DSA:3.40.50.970|PF02776|SSF52518 BPTD_RS04640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|SSF46785|SSF53850 BPTD_RS04645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638|IPR015168 Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SM00062|SSF53850 BPTD_RS04650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|SSF161098 BPTD_RS04655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|SSF161098 BPTD_RS04665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS04670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PTHR11699|PTHR11699:SF108|SSF53720 BPTD_RS04675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003953|IPR012831|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Precorrin 3B synthase CobZ|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PTHR11632|PTHR11632:SF47|SSF51905|SSF56425|TIGR02485 BPTD_RS04680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012830|IPR023234 Citrate utilization protein B|NarG-like domain G3DSA:3.30.70.20|SSF103501|SSF54862|TIGR02484 BPTD_RS04685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007400 PrpF protein G3DSA:3.10.310.10|PF04303|PTHR30349|PTHR30349:SF39|SSF54506 BPTD_RS04690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003830|IPR013785 (2R)-phospho-3-sulpholactate synthase, ComA|Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.70|PF02679|SSF102110 BPTD_RS04695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002831|IPR011991|IPR021586 Transcription regulator TrmB, C-terminal|Transcription regulator TrmB, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.870.10|PF01978|PF11495|PTHR34293|PTHR34293:SF1|SSF46785|SSF56024 BPTD_RS04700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF6|SSF56529 BPTD_RS04705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|PTHR10696|PTHR10696:SF23|SSF51197 BPTD_RS04710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS04715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|SSF46785|SSF53850 BPTD_RS04720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007560|IPR011335|IPR011856 Restriction endonuclease type II-like|Restriction endonuclease type IV, Mrr|tRNA endonuclease-like domain GO:0003676|GO:0003677|GO:0004518|GO:0004519|GO:0009307 G3DSA:3.40.1350.10|PF04471|SSF52980 BPTD_RS04725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801 BPTD_RS04730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1 BPTD_RS04735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|PTHR34075|PTHR34075:SF2|SSF50249 BPTD_RS04740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039 Thiolase|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PIRSF000429|PTHR18919|PTHR18919:SF108|SSF53901 BPTD_RS04745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|SSF54909 BPTD_RS04750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS04755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|SSF46785|SSF53850 BPTD_RS04760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR031807 HicB-like antitoxin of toxin-antitoxin system PF15919|SSF143100 BPTD_RS04765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012933 HicA mRNA interferase family GO:0003729 G3DSA:3.30.920.30|PF07927|SSF54786 BPTD_RS04775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF4|SSF103473 BPTD_RS04780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006346|IPR006439|IPR023198|IPR023214 2-phosphoglycolate phosphatase, prokaryotic|HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0008967|GO:0016787|GO:0046295 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF24|SSF56784|TIGR01449|TIGR01509|TIGR01549 BPTD_RS04785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010233|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 G3DSA:3.40.50.150|MF_00472|PF13489|PTHR10108|PTHR10108:SF910|SSF53335|TIGR01983 BPTD_RS04790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006664|IPR006665|IPR006690 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PR01023|PS01068|PTHR30128|SSF103088 BPTD_RS04795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain|Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719|TIGR01063 BPTD_RS04800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR022278 Aminotransferase class V domain|Phosphoserine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|PTHR21152|PTHR21152:SF1|SSF53383|TIGR01364 BPTD_RS04805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001086|IPR002701|IPR002912|IPR008242|IPR010957|IPR018528|IPR020822 ACT domain|Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase|Chorismate mutase, type II|Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain|Prephenate dehydratase|Prephenate dehydratase, conserved site GO:0004106|GO:0004664|GO:0005737|GO:0008152|GO:0009094|GO:0016597|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PF01842|PIRSF001500|PS00858|PTHR21022|PTHR21022:SF0|SM00830|SSF48600|SSF53850|SSF55021|TIGR01807 BPTD_RS04810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:3.40.50.720|PF02153|PTHR21363|PTHR21363:SF0|SSF48179|SSF51735 BPTD_RS04815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|PTHR21090|PTHR21090:SF21|SSF55205|TIGR01356 BPTD_RS04820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|PTHR21299|SSF52540|TIGR00017 BPTD_RS04825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|PTHR10724|PTHR10724:SF6|SM00316|SSF50249|TIGR00717 BPTD_RS04830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000119|IPR005685|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 G3DSA:4.10.520.10|PF00216|PR01727|PTHR33175|PTHR33175:SF5|SM00411|SSF47729|TIGR00988 BPTD_RS04835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PF06305 BPTD_RS04840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990|IPR030865 Lipopolysaccharide assembly protein B|Tetratricopeptide-like helical domain GO:0005515|GO:0008653 G3DSA:1.25.40.10|MF_00994|SSF48452 BPTD_RS04845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002173|IPR011611|IPR011913|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|RfaE bifunctional protein, domain I|Ribokinase-like GO:0005975|GO:0016773|GO:0016779 G3DSA:3.40.1190.20|PF00294|PS00583|PTHR10584|PTHR10584:SF159|SSF53613|TIGR02198 BPTD_RS04850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001509|IPR011912|IPR016040 ADP-L-glycero-D-manno-heptose-6-epimerase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0005975|GO:0008712|GO:0050661|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_01601|PF01370|PTHR10366|PTHR10366:SF469|SSF51735|TIGR02197 BPTD_RS04860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS04865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001216|IPR001926|IPR005856|IPR005858 Cysteine synthase|Cysteine synthase CysM|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|PTHR10314|PTHR10314:SF100|SSF53686|TIGR01136|TIGR01138 BPTD_RS04870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011757|IPR023346|IPR031304 Lysozyme-like domain|Lytic transglycosylase MltB|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|PF13406|PTHR30163|PTHR30163:SF0|SSF53955|TIGR02282 BPTD_RS04875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|PTHR10625:SF104|SSF52768 BPTD_RS04880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000049|IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|PTHR21294|PTHR21294:SF8|SM00893|SSF52402 BPTD_RS04885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein subunit alpha, conserved site|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|PTHR10909|PTHR10909:SF294|SM00893|SSF52402|SSF52467 BPTD_RS04890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR020953|IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain|Acyl-CoA dehydrogenase, N-terminal, bacteria|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF12418|PF12806|PTHR10909|PTHR10909:SF296|SSF47203|SSF56645 BPTD_RS04895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000866|IPR012336|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.30.1020.10|G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|PTHR10681|PTHR10681:SF99|SSF52833 BPTD_RS04900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000957|IPR005669 Sulphate/thiosulphate-binding, conserved site|Thiosulphate/Sulfate-binding protein GO:0008271|GO:0008272|GO:0015419|GO:0030288 G3DSA:3.40.190.10|PF13531|PS00757|PTHR30368|PTHR30368:SF2|SSF53850|TIGR00971 BPTD_RS04910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR005667|IPR011865 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF6|SSF161098|TIGR00969|TIGR02139 BPTD_RS04915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR005667|IPR011866 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysW GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF1|SSF161098|TIGR00969|TIGR02140 BPTD_RS04920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR005666|IPR008995|IPR017871|IPR024765|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Sulphate transport system permease protein 1|TOBE-like domain GO:0005524|GO:0006810|GO:0016020|GO:0016887|GO:0042626 G3DSA:3.40.50.300|PF00005|PF12857|PS00211|PTHR24220|PTHR24220:SF123|SM00382|SSF50331|SSF52540|TIGR00968 BPTD_RS04925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002500|IPR004511|IPR011798|IPR014729 Adenosine 5'-phosphosulphate reductase|Phosphoadenosine phosphosulphate reductase|Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004604|GO:0008152|GO:0019344|GO:0019379|GO:0055114 G3DSA:3.40.50.620|PF01507|PIRSF000857|PTHR23293|PTHR23293:SF11|SSF52402|TIGR02055 BPTD_RS04930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002500|IPR011784|IPR014729 Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase, small subunit GO:0003824|GO:0004781|GO:0008152|GO:0019419 G3DSA:3.40.50.620|PF01507|PIRSF002936|PTHR23293|PTHR23293:SF6|SSF52402|TIGR02039 BPTD_RS04940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PTHR11228|PTHR11228:SF26|SM00729|SSF102114 BPTD_RS04950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF61|SSF103481 BPTD_RS04955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|PTHR15680|SSF50104|TIGR01024 BPTD_RS04960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR12992|SSF55811 BPTD_RS04965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF112|SSF51430 BPTD_RS04970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS04975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23534|SSF103473 BPTD_RS04980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007440|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 G3DSA:3.40.1410.10|MF_01632|PF04345|PTHR38683|SSF64288 BPTD_RS04985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000748|IPR002942|IPR006145|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PTHR21600|PTHR21600:SF25|SM00363|SSF55120|SSF55174|TIGR00093 BPTD_RS04990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 BPTD_RS04995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:2.40.50.100|PF13533|PTHR30158|PTHR30158:SF3|SSF111369 BPTD_RS05000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF13|SSF82693|SSF82714|SSF82866|TIGR00915 BPTD_RS05005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PTHR30203|PTHR30203:SF15|SSF56954|TIGR01845 BPTD_RS05010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226|PTHR33884|PTHR33884:SF1 BPTD_RS05015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|PTHR12151|SSF52833 BPTD_RS05020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001567|IPR024077|IPR024079|IPR024080 Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B GO:0004222|GO:0006508|GO:0008237 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|PTHR11804|PTHR11804:SF8|SSF55486 BPTD_RS05025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|PS00767|PTHR10025|SSF51735|SSF53223 BPTD_RS05030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF613|SM00421|SM00448|SSF46894|SSF52172 BPTD_RS05035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08448|PF13188|PR00344|PTHR24423|PTHR24423:SF505|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BPTD_RS05040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004660|IPR005474|IPR009014|IPR029061|IPR033247 2-oxo-acid dehydrogenase E1 component homodimeric type|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, N-terminal GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|PTHR11624|PTHR11624:SF67|SSF52518|SSF52922|TIGR00759 BPTD_RS05045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006256|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex|E3-binding domain|Single hybrid motif GO:0004742|GO:0006096|GO:0008152|GO:0016746|GO:0045254 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PTHR23151|PTHR23151:SF68|SSF47005|SSF51230|SSF52777|TIGR01348 BPTD_RS05050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000089|IPR003016|IPR004099|IPR006258|IPR011053|IPR012999|IPR016156|IPR023753 2-oxo acid dehydrogenase, lipoyl-binding site|Biotin/lipoyl attachment|Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Single hybrid motif GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:2.40.50.100|G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF00364|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PS00189|PTHR22912|PTHR22912:SF160|SSF51230|SSF51905|SSF55424|TIGR01350 BPTD_RS05055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PR00207|PTHR30244|PTHR30244:SF1|SSF64518 BPTD_RS05060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:3.40.1280.10|PF04452|PIRSF015601|PTHR30027|PTHR30027:SF3|SSF75217|SSF88697|TIGR00046 BPTD_RS05070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PTHR11624|PTHR11624:SF1|SM00861|SSF52518|SSF52922|TIGR00232 BPTD_RS05075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|PTHR10836|PTHR10836:SF50|SM00846|SSF51735|SSF55347|TIGR01534 BPTD_RS05080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001576|IPR015824|IPR015901|IPR015911 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|PTHR11406|SSF53748 BPTD_RS05085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|PTHR24322|PTHR24322:SF317|SSF51735 BPTD_RS05090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 BPTD_RS05095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002505|IPR012147 Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase GO:0008152|GO:0016746 G3DSA:3.40.50.10750|PF01515|PIRSF000428|PTHR23406|PTHR23406:SF1|SSF53659 BPTD_RS05100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR024501|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF3141 G3DSA:3.40.50.1820|PF11339|SSF53474 BPTD_RS05105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF14834|PTHR11260|PTHR11260:SF322|SSF47616|SSF52833 BPTD_RS05110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007837|IPR027369 DNA damage-inducible protein DinB|DinB/YfiT-like putative metal-dependent hydrolase G3DSA:1.20.120.450|PF05163|PTHR37302|PTHR37302:SF2|SSF109854 BPTD_RS05120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR10545|SSF55729 BPTD_RS05125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001623|IPR002939|IPR008971 Chaperone DnaJ, C-terminal|DnaJ domain|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493 BPTD_RS05130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:1.10.1660.10|PF13591 BPTD_RS05135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008407|IPR011606 Branched-chain amino acid transport, AzlD|Branched-chain amino acid transport, permease PF03591|PF05437|PTHR34979 BPTD_RS05140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384|PTHR11101|PTHR11101:SF59 BPTD_RS05145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001453|IPR008284 MoaB/Mog domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PS01078|PTHR10192|SM00852|SSF53218|TIGR00177 BPTD_RS05155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.60.40.1590|G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 BPTD_RS05165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|PTHR33370|SM00316|SSF50249|TIGR00008 BPTD_RS05170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR011991|IPR012845|IPR013324|IPR013325|IPR014284|IPR016263|IPR028617 RNA polymerase sigma factor FliA|RNA polymerase sigma factor, FliA/WhiG|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003899|GO:0006351|GO:0006352|GO:0006355|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00962|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PTHR30385|PTHR30385:SF7|SSF88659|SSF88946|TIGR02479|TIGR02937 BPTD_RS05180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 MF_00725|PD015582|PF05247|SSF63592 BPTD_RS05185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 MF_01891|PD016592|PF05280|PIRSF003159|SSF160930 BPTD_RS05190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000540|IPR002898|IPR022522 Flagellar motor protein MotA, conserved site|Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307|PTHR30433|PTHR30433:SF4|TIGR03818 BPTD_RS05195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|PTHR30329|PTHR30329:SF2|SSF103088 BPTD_RS05200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 BPTD_RS05205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207|IPR015162 CheW-like domain|CheY binding|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|G3DSA:3.30.70.400|PF01584|PF01627|PF02518|PF02895|PF09078|PR00344|PTHR22617|PTHR22617:SF20|SM00073|SM00260|SM00387|SM01231|SSF47226|SSF47384|SSF50341|SSF55052|SSF55874 BPTD_RS05210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 BPTD_RS05215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003122|IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PTHR32089|PTHR32089:SF48|SM00283|SM00304|SSF47170|SSF58104 BPTD_RS05225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF21|SM00448|SSF52172|SSF52738 BPTD_RS05230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 BPTD_RS05235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 G3DSA:1.10.287.500|G3DSA:1.20.5.590|PF04344|PIRSF002884|PTHR22617|PTHR22617:SF32|SSF75708 BPTD_RS05240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS05260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|SSF51430 BPTD_RS05265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|PTHR38686|SSF56317|TIGR00546 BPTD_RS05270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000644|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PTHR22777|SM01091|SSF54631|SSF56176 BPTD_RS05275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002036|IPR020549|IPR023091 Endoribonuclease YbeY|Endoribonuclease YbeY, conserved site|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|PS01306|PTHR22881|SSF55486|TIGR00043 BPTD_RS05280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|PTHR30473|PTHR30473:SF1|SSF52540 BPTD_RS05285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|PTHR11918|PTHR11918:SF43|SM00729|SSF102114|TIGR00089|TIGR01574 BPTD_RS05295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS05300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|PTHR30081|SSF82866|TIGR00916|TIGR00966 BPTD_RS05305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005791|IPR022645|IPR022646|IPR022813|IPR027398 Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|SecD export protein N-terminal TM domain GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PF13721|PTHR30081|PTHR30081:SF1|SSF82866|TIGR00916|TIGR01129 BPTD_RS05310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|PTHR33909|PTHR33909:SF1|SM01323|TIGR00739 BPTD_RS05315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|PTHR21148|PTHR21148:SF26|SSF51713|TIGR00430|TIGR00449 BPTD_RS05325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|PTHR30307|PTHR30307:SF0|SSF111337|TIGR00113 BPTD_RS05330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000667|IPR012338 Beta-lactamase/transpeptidase-like|Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 G3DSA:3.40.710.10|PF02113|PR00922|PTHR30023|PTHR30023:SF0|SSF56601|TIGR00666 BPTD_RS05335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005765|IPR029057 Phosphoribosyltransferase-like|Uracil phosphoribosyl transferase GO:0004845|GO:0006223 G3DSA:3.40.50.2020|MF_01218_B|PF14681|PTHR10285|SSF53271|TIGR01091 BPTD_RS05340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS05345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR003992|IPR004899|IPR005546|IPR006315|IPR011050|IPR012332 Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin|Pertactin virulence factor family|Pertactin, central region GO:0007155|GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03212|PF03797|PR01482|PR01484|PTHR12338|SM00869|SSF103515|SSF51126|TIGR01414 BPTD_RS05350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR016040|IPR019478|IPR028281 NAD(P)-binding domain|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Siroheme synthase, central domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008152|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|MF_01646|PF00590|PF10414|PF13241|PF14824|PIRSF036426|PS00839|PS00840|PTHR21091|PTHR21091:SF16|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 BPTD_RS05360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010279 Protein of unknown function DUF883, ElaB PF05957|PTHR35893|PTHR35893:SF3 BPTD_RS05365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 BPTD_RS05375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002830|IPR012349|IPR023677 FMN-binding split barrel|UbiD decarboxylyase family|UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694|GO:0010181|GO:0016491|GO:0016831|GO:0055114 G3DSA:1.20.5.570|G3DSA:3.40.1670.10|MF_01636|PF01977|PTHR30108|PTHR30108:SF1|SSF143968|SSF50475|TIGR00148 BPTD_RS05380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|PTHR21666|SSF53955 BPTD_RS05385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF401|SSF53383 BPTD_RS05390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SSF56176 BPTD_RS05395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|PTHR23406|PTHR23406:SF23|SM00919|SM01274|SSF51735|SSF53223|SSF53659 BPTD_RS05405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000468 Barstar (barnase inhibitor) G3DSA:3.30.370.10|PF01337|SSF52038 BPTD_RS05410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF560|SM00382|SSF52540|TIGR00972 BPTD_RS05425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR005672 ABC transporter type 1, transmembrane domain MetI-like|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF0|SSF161098|TIGR00974 BPTD_RS05430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR011864 ABC transporter type 1, transmembrane domain MetI-like|Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006810|GO:0006817|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF1|SSF161098|TIGR02138 BPTD_RS05435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005673|IPR024370 ABC transporter, phosphate-binding protein PstS|PBP domain GO:0035435|GO:0042301|GO:0043190 G3DSA:3.40.190.10|PF12849|PIRSF002756|PTHR30570|PTHR30570:SF0|SSF53850|TIGR00975 BPTD_RS05440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|PTHR30218|PTHR30218:SF0|SSF140356|SSF143724|SSF56024|TIGR03705 BPTD_RS05445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003695|IPR022371|IPR030673 Exopolyphosphatase|Ppx/GppA phosphatase|Pyrophosphatase, GppA/Ppx-type GO:0004309|GO:0006793 G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PIRSF001267|PTHR30005|PTHR30005:SF4|SSF109604|SSF53067|TIGR03706 BPTD_RS05450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13444|PTHR37323|PTHR37323:SF1|SSF55729 BPTD_RS05455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF15|SSF53738|SSF55957|TIGR01455 BPTD_RS05460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00792|PS00793|PTHR20941|PTHR20941:SF1|SSF51717|TIGR01496 BPTD_RS05465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 BPTD_RS05470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002877|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0008168|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|PTHR10920|PTHR10920:SF20|SSF53335 BPTD_RS05475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001890 RNA-binding, CRM domain GO:0003723 G3DSA:3.30.110.60|PD010559|PF01985|PTHR31846|SM01103|SSF75471 BPTD_RS05485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF2 BPTD_RS05495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002575|IPR005280|IPR011009 Aminoglycoside phosphotransferase|Homoserine kinase ThrB|Protein kinase-like domain GO:0004413|GO:0009088 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|MF_00301|PF01636|PTHR21064|SSF56112|TIGR00938 BPTD_RS05500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001269|IPR004653|IPR013785|IPR018517 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114 G3DSA:3.20.20.70|MF_02041|PF01207|PS01136|PTHR11082|PTHR11082:SF29|SSF51395 BPTD_RS05505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 BPTD_RS05515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011991|IPR017039|IPR023679 Uncharacterised protein family UPF0761, bacterial|Virulence factor BrkB|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|MF_00672|PF03631|PTHR30213|PTHR30213:SF0|SSF46785|TIGR00765 BPTD_RS05520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018643 Protein of unknown function DUF2069, membrane PF09842 BPTD_RS05525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003846 Uncharacterised protein family UPF0061 MF_00692|PF02696|PTHR32057 BPTD_RS05530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF578|SM00448|SM00862|SSF46894|SSF52172 BPTD_RS05535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000160|IPR001633|IPR003594|IPR003661|IPR004358|IPR029787 EAL domain|GGDEF domain|Histidine kinase-like ATPase, C-terminal domain|Nucleotide cyclase|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.20.20.450|G3DSA:3.30.565.10|G3DSA:3.30.70.270|PF00563|PF00990|PF02518|PR00344|PTHR24423|SM00052|SM00267|SM00387|SM00388|SSF141868|SSF47384|SSF55073|SSF55874 BPTD_RS05540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF519|SM00382|SSF52540 BPTD_RS05550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF398 BPTD_RS05560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|SSF53822 BPTD_RS05565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF458|SM00382|SSF52540 BPTD_RS05570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24096|SSF56801 BPTD_RS05575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PS01081|PTHR30055|PTHR30055:SF56|SSF46689|SSF48498 BPTD_RS05585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|PTHR22594|PTHR22594:SF4|SSF50249|SSF55681|TIGR00499 BPTD_RS05590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|PTHR24322|PTHR24322:SF485|SM00822|SSF51735 BPTD_RS05595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000352|IPR004374|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF6|SM00937|SSF75620|TIGR00020 BPTD_RS05600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 PF01368|PF02272|PTHR30255|PTHR30255:SF2|SSF64182|TIGR00644 BPTD_RS05610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003838|IPR011925|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954 PF02687|PF12704|PTHR30489|PTHR30489:SF8|TIGR02212 BPTD_RS05615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR011924|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Lipoprotein releasing system, ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF111|SM00382|SSF52540|TIGR02211 BPTD_RS05620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001130|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01137|PTHR10060|SSF51556 BPTD_RS05625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005546|IPR006315|IPR011050|IPR012332 Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|SSF51126|TIGR01414 BPTD_RS05635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR024519 Invasin beta-domain of outer membrane PF11924|PTHR39576|PTHR39576:SF2 BPTD_RS05645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004477|IPR025405 ComEC/Rec2-related protein|Domain of unknown function DUF4131 PF03772|PF13567|PTHR30619|PTHR30619:SF2|TIGR00360 BPTD_RS05650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|PTHR10992|SSF53474 BPTD_RS05660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003141|IPR004013|IPR016195 PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260 G3DSA:3.20.20.140|PF02811|PTHR30007|PTHR30007:SF4|SM00481|SSF89550 BPTD_RS05665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001437|IPR006358|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor GreB|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|MF_00930|PF01272|PF03449|PIRSF006092|PS00829|PTHR30437|PTHR30437:SF6|SSF46557|SSF54534|TIGR01461 BPTD_RS05670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000259|IPR008966 Adhesion domain|Fimbrial-type adhesion domain GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF16970|PTHR33420|SSF49401 BPTD_RS05680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|PTHR23406|SM00919|SM01274|SSF51735|SSF53223|SSF53659 BPTD_RS05685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004660|IPR005474|IPR009014|IPR017600|IPR029061|IPR033247 2-oxo-acid dehydrogenase E1 component homodimeric type|Alpha-ketoglutarate dehydrogenase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, N-terminal GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|PTHR11624|PTHR11624:SF67|SSF52518|SSF52922|TIGR00759|TIGR03186 BPTD_RS05690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PTHR30154|PTHR30154:SF28|SM00344|SSF46785|SSF54909 BPTD_RS05695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004813|IPR004814 Oligopeptide transporter OPT|Oligopeptide transporter, OPT superfamily GO:0055085 PF03169|PTHR31645|PTHR31645:SF0|TIGR00728|TIGR00733 BPTD_RS05705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001017|IPR005475|IPR011603|IPR029061|IPR031717|IPR032106 2-oxoglutarate dehydrogenase E1 component|2-oxoglutarate dehydrogenase E1 component, N-terminal domain|Dehydrogenase, E1 component|Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal|Thiamin diphosphate-binding fold|Transketolase-like, pyrimidine-binding domain GO:0004591|GO:0006099|GO:0008152|GO:0016624|GO:0030976|GO:0055114 G3DSA:3.40.50.970|PF00676|PF02779|PF16078|PF16870|PIRSF000157|PTHR23152|PTHR23152:SF4|SM00861|SSF52518|TIGR00239 BPTD_RS05710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006255|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide succinyltransferase|E3-binding domain|Single hybrid motif GO:0004149|GO:0006099|GO:0008152|GO:0016746|GO:0045252 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PTHR23151|PTHR23151:SF47|SSF47005|SSF51230|SSF52777|TIGR01347 BPTD_RS05715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004099|IPR006258|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PTHR22912|PTHR22912:SF131|SSF51905|SSF55424|TIGR01350 BPTD_RS05720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005654|IPR027417 ATPase, AFG1-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF03969|PTHR12169|PTHR12169:SF11|SSF52540 BPTD_RS05725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|SSF51735 BPTD_RS05730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|SSF46785|SSF53850 BPTD_RS05735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS05745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF459|SSF51735 BPTD_RS05750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|PTHR30468|PTHR30468:SF2|SSF51197 BPTD_RS05755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF9|SSF88659|SSF88946|TIGR02937 BPTD_RS05770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006860|IPR012373|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal PF04773|PF16220|PIRSF018266|PTHR30273|PTHR30273:SF3 BPTD_RS05775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF17|SM00965|SSF56935|TIGR01783 BPTD_RS05780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR022109 Protein of unknown function DUF3649 PF12365 BPTD_RS05790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021762 Protein of unknown function DUF3325 PF11804 BPTD_RS05795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002305|IPR002306|IPR010879|IPR014729|IPR024109 Aminoacyl-tRNA synthetase, class Ic|Domain of unknown function DUF1508|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|PTHR10055|PTHR10055:SF11|SSF160113|SSF52374|TIGR00233 BPTD_RS05805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023097|IPR023319|IPR023323|IPR032639 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like domain|RuvA domain 2-like|S1 domain|Tex RuvX-like domain|Tex protein, YqgF-like domain|Tex-like domain|Tex-like protein, HTH domain|Tex-like protein, N-terminal|YqgF/RNase H-like domain GO:0003676|GO:0006139 G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|G3DSA:3.30.420.140|PF00575|PF09371|PF12836|PF16921|PTHR10724|PTHR10724:SF1|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098 BPTD_RS05810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006555|IPR010614|IPR027417 ATP-dependent helicase, C-terminal|DEAD2|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006139|GO:0008026|GO:0016818 G3DSA:3.40.50.300|PF06733|PF13307|PTHR11472|PTHR11472:SF37|SM00491|SSF52540 BPTD_RS05815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990|IPR017689 Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|MF_00922|PF13525|PTHR37423|SSF48452|TIGR03302 BPTD_RS05820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF73|SM00363|SSF55120|SSF55174|TIGR00005 BPTD_RS05825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase G3DSA:3.60.140.10|PF02578|PTHR30616|PTHR30616:SF3|SSF64438|TIGR00726 BPTD_RS05830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010941|IPR010963|IPR029058 Alpha/Beta hydrolase fold|Poly(R)-hydroxyalkanoic acid synthase, class I|Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0005737|GO:0016746|GO:0042619 G3DSA:3.40.50.1820|PF07167|PTHR36837|PTHR36837:SF2|SSF53474|TIGR01838 BPTD_RS05835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR011283|IPR016040|IPR020904 Acetoacetyl-CoA reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0005737|GO:0016491|GO:0018454|GO:0042619|GO:0055114 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF328|SM00822|SSF51735|TIGR01829 BPTD_RS05840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007897|IPR010134|IPR012909 PHA accumulation regulator DNA-binding, N-terminal|PHB accumulation regulatory|Polyhydroxyalkanoate synthesis repressor PhaR PF05233|PF07879|TIGR01848 BPTD_RS05845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018470 Periplasmic metal-binding protein Tp34-type PF10634|PIRSF017018 BPTD_RS05850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008972|IPR028096 Cupredoxin|EfeO-type cupredoxin-like domain G3DSA:2.60.40.420|PF13473|SSF49503 BPTD_RS05855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 PF03239|PTHR31632 BPTD_RS05860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PF12801 BPTD_RS05865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|PTHR13774|PTHR13774:SF15|SSF54506|TIGR00654 BPTD_RS05870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR35006|SSF54593 BPTD_RS05880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|PTHR35563|PTHR35563:SF1|SSF51556 BPTD_RS05885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS05890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001354|IPR013341|IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PTHR13794|SM00922|SSF51604|SSF54826 BPTD_RS05895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30346|SSF46785|SSF53850 BPTD_RS05900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|PTHR24322:SF390|SM00822|SSF51735 BPTD_RS05905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|PTHR23501|PTHR23501:SF5|SSF103473 BPTD_RS05910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001734|IPR031155 Sodium/solute symporter|Urea active transporter GO:0005215|GO:0006810|GO:0015204|GO:0016020|GO:0016021|GO:0055085|GO:0071918 PF00474|PTHR11819|PTHR11819:SF94 BPTD_RS05920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003507|IPR027461|IPR027478|IPR029062 Class I glutamine amidotransferase-like|LD-carboxypeptidase A, C-terminal domain|Murein tetrapeptide carboxypeptidase, N-terminal domain|Peptidase family S66 G3DSA:3.40.50.10740|G3DSA:3.50.30.60|PF02016|PIRSF028757|PTHR30237|PTHR30237:SF2|SSF141986|SSF52317 BPTD_RS05925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|PTHR10672|SM01007|SSF53639 BPTD_RS05930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30427|SSF46785|SSF53850 BPTD_RS05935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PTHR22981|SSF48179|SSF51735 BPTD_RS05940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS05945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009569 Amino acid synthesis, putative G3DSA:3.30.1330.110|PF06684|SSF160519 BPTD_RS05960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005220 Bacterial OB-fold G3DSA:2.40.50.200|PF04076|PTHR36571|PTHR36571:SF1|SSF101756 BPTD_RS05965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 G3DSA:3.40.630.10|PF04952|SSF53187 BPTD_RS05970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS05975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR32322|PTHR32322:SF11|SSF103481 BPTD_RS05980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850 BPTD_RS05985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF474|SM00382|SSF52540 BPTD_RS05990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|SSF161098|TIGR01726 BPTD_RS05995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|SSF161098|TIGR01726 BPTD_RS06000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|PTHR18966:SF191|SM00062|SSF53850 BPTD_RS06005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF306|SSF53383 BPTD_RS06010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein G3DSA:3.50.30.40|PF03737|PTHR33254|PTHR33254:SF5|SSF89562 BPTD_RS06025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019180 Oxidoreductase-like, N-terminal PF09791 BPTD_RS06030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007298 Copper resistance lipoprotein NlpE PF04170 BPTD_RS06035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BPTD_RS06040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007627|IPR009959|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|G3DSA:3.10.450.50|PF04542|PF08281|PF12680|PTHR30173|PTHR30173:SF11|SSF54427|SSF88659|SSF88946|TIGR02937 BPTD_RS06050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR024530 Putative quorum-sensing-regulated virulence factor PD056452|PF12843|PTHR40613|PTHR40613:SF1 BPTD_RS06055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|PTHR11839|PTHR11839:SF9|SSF55811 BPTD_RS06060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536 G3DSA:3.10.20.30|PF00111|SSF54292 BPTD_RS06065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|PTHR35560|PTHR35560:SF1|SSF53474 BPTD_RS06070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 BPTD_RS06075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 BPTD_RS06085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR005546|IPR006315 Autotransporter beta-domain|Outer membrane autotransporter barrel|Pertactin virulence factor family GO:0007155|GO:0019867 G3DSA:2.40.128.130|PF03797|PR01484|PTHR12338|SM00869|SSF103515|TIGR01414 BPTD_RS06090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR005546|IPR006315 Autotransporter beta-domain|Outer membrane autotransporter barrel|Pertactin virulence factor family GO:0007155|GO:0019867 G3DSA:2.40.128.130|PF03797|PR01484|PTHR12338|SM00869|SSF103515|TIGR01414 BPTD_RS06095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PS01081|PTHR30055|PTHR30055:SF40|SSF46689 BPTD_RS06100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008322 Uncharacterised protein family UPF0261 MF_00677|PF06792|PIRSF033271|PTHR31862 BPTD_RS06105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009215|IPR013785|IPR015813 Aldolase-type TIM barrel|Pyruvate/Phosphoenolpyruvate kinase-like domain|TIM-barrel domain, IGPS-like GO:0003824 G3DSA:1.20.5.460|G3DSA:3.20.20.70|PF09370|PIRSF034452|PTHR31862|SSF51621 BPTD_RS06110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|PTHR39332|PTHR39332:SF2|SSF55961 BPTD_RS06115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|PTHR30419:SF3|SSF46785|SSF53850 BPTD_RS06120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011059|IPR013108|IPR023100|IPR032466 Amidohydrolase 3|D-aminoacylase, insert domain|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810|GO:0016811 G3DSA:2.30.40.10|G3DSA:3.20.20.140|G3DSA:3.30.1490.130|PF07969|PTHR22935|PTHR22935:SF55|SSF51338|SSF51556 BPTD_RS06125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS06130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001094|IPR001433|IPR001709|IPR008254|IPR017938|IPR029039 Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein pyridine nucleotide cytochrome reductase|Flavoprotein-like domain|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0010181|GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.360|G3DSA:3.40.50.80|PF00175|PF00258|PR00369|PR00371|PTHR19384|PTHR19384:SF17|SSF52218|SSF52343|SSF63380 BPTD_RS06135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|PIRSF006268|PTHR30040|PTHR30040:SF3|SSF143631 BPTD_RS06140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019613 Protein of unknown function DUF4198 PF10670 BPTD_RS06145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014469 Protein of unknown function DUF2271 PF10029|PIRSF014995 BPTD_RS06150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032307 Putative PepSY TM-like protein PF16357|PTHR40115 BPTD_RS06155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF165|SM00382|SSF52540 BPTD_RS06160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000412|IPR005981|IPR013525 ABC-2 transporter|ABC-2 type transporter|ABC-2 type transporter, NodJ GO:0005215|GO:0006810|GO:0009877|GO:0015772|GO:0016020 PF01061|PIRSF006648|PR00164|PTHR30413|PTHR30413:SF7|TIGR01291 BPTD_RS06165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 BPTD_RS06170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|PTHR28259|TIGR00494 BPTD_RS06175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002937|IPR017830|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain|Squalene-associated FAD-dependent desaturase GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|SSF51905|TIGR03467 BPTD_RS06180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002060|IPR008949|IPR017828|IPR019845 Isoprenoid synthase domain|Squalene/phytoene synthase|Squalene/phytoene synthase HpnD|Squalene/phytoene synthase, conserved site GO:0009058|GO:0016117|GO:0016740|GO:0016765|GO:0016767 G3DSA:1.10.600.10|PF00494|PS01044|PS01045|PTHR31480|SSF48576|TIGR03465 BPTD_RS06185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002060|IPR008949|IPR017827 Isoprenoid synthase domain|Squalene synthase HpnC|Squalene/phytoene synthase GO:0009058|GO:0016740 G3DSA:1.10.600.10|PF00494|PTHR31480|PTHR31480:SF8|SSF48576|TIGR03464 BPTD_RS06190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|PTHR30511|PTHR30511:SF0|SM01005|SSF50621|SSF51419|TIGR00492 BPTD_RS06195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|PTHR24322:SF459|SSF51735 BPTD_RS06205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS06210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF29|SSF88659|SSF88946|TIGR02937 BPTD_RS06215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002035|IPR021908|IPR022156 Protein of unknown function DUF3520|Uncharacterised protein YfbK, N-terminal|von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PF12034|PF12450|PTHR10166|PTHR10166:SF15|SM00327|SSF53300 BPTD_RS06220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF13481|PR01874|PTHR32472|SM00382|SSF52540|SSF54211|TIGR00416 BPTD_RS06225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269 BPTD_RS06235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF153|TIGR00797 BPTD_RS06245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002150|IPR027493 Ribosomal protein L31|Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00502|PF01197|PR01249|PS01143|PTHR33280|PTHR33280:SF2|SSF143800|TIGR00105 BPTD_RS06250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004981|IPR017485 Tryptophan 2,3-dioxygenase|Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441|GO:0020037 MF_01972|PF03301|PTHR10138|PTHR10138:SF0|SSF140959|TIGR03036 BPTD_RS06255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007325|IPR017484 Kynurenine formamidase|Kynurenine formamidase, bacteria GO:0004061|GO:0004328|GO:0019441 G3DSA:3.50.30.50|MF_01969|PF04199|PTHR31118|SSF102198|TIGR03035 BPTD_RS06260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001405|IPR010994|IPR025657 RadC protein|RadC-like JAB domain|RuvA domain 2-like G3DSA:1.10.150.20|G3DSA:3.40.140.10|PF04002|PTHR30471|PTHR30471:SF5|SSF47781|TIGR00608 BPTD_RS06265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 G3DSA:3.10.50.40|PF00254|SSF54534 BPTD_RS06270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|PTHR30426|TIGR00216 BPTD_RS06275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR004046|IPR005955|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Maleylacetoacetate isomerase|Thioredoxin-like fold GO:0003824|GO:0005515|GO:0005737|GO:0009072 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13417|PF14497|PTHR11260|PTHR11260:SF289|SSF47616|SSF52833|TIGR01262 BPTD_RS06290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BPTD_RS06295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|SM00833|SSF52540|SSF90002 BPTD_RS06300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|PTHR23026:SF110|SSF55469 BPTD_RS06305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF13|SSF46785|SSF53850 BPTD_RS06315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005234|IPR011991 Chromosome segregation/condensation protein ScpB|Winged helix-turn-helix DNA-binding domain GO:0051304 G3DSA:1.10.10.10|PF04079|PTHR34298|PTHR34298:SF2|SSF46785|TIGR00281 BPTD_RS06320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093 BPTD_RS06325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003728|IPR028989|IPR028998 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:2.30.30.180|G3DSA:3.30.300.70|MF_01077|PF02576|PTHR33867|PTHR33867:SF1|SSF74942|SSF75420 BPTD_RS06330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003029|IPR009019|IPR010213|IPR010214|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 DNA repair Rad51/transcription factor NusA, alpha-helical|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination factor NusA, C-terminal duplication|Transcription termination/antitermination protein NusA, bacterial GO:0000166|GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|PF14520|PTHR22648|PTHR22648:SF0|SM00316|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953|TIGR01954 BPTD_RS06335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000178|IPR005225|IPR006847|IPR009000|IPR009061|IPR013575|IPR023115|IPR027417 Initiation factor 2 associated domain, bacterial|P-loop containing nucleoside triphosphate hydrolase|Putative DNA-binding domain|Small GTP-binding protein domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.30.56.50|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF08364|PF11987|PS01176|PTHR23115|PTHR23115:SF184|SSF46955|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 BPTD_RS06340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000238|IPR015946|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PTHR33515|SSF89919|TIGR00082 BPTD_RS06345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002501|IPR014780|IPR020103|IPR032819 Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 MF_01080|PF01509|PF16198|PTHR13767|PTHR13767:SF2|SSF55120|TIGR00431 BPTD_RS06350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417|IPR031157 Elongation factor G, III-V domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF14|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 BPTD_RS06355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005138|IPR008992|IPR016187|IPR020063 Aerolysin/Pertussis toxin APT|Bordetella pertussis toxin B, subunit 2/3, C-terminal|C-type lectin fold|Enterotoxin GO:0005576|GO:0009405 G3DSA:2.40.50.110|G3DSA:3.10.40.10|PD037992|PF02918|PF03440|SSF50203|SSF56436 BPTD_RS06360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008992 Enterotoxin GO:0009405 G3DSA:2.40.50.110|SSF50203 BPTD_RS06365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF1|SSF102405|TIGR00730 BPTD_RS06370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|PTHR10133|PTHR10133:SF27|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 BPTD_RS06375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535|PTHR16950 BPTD_RS06380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|PTHR17630|PTHR17630:SF42|SSF53474 BPTD_RS06385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003841|IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein|Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 G3DSA:1.20.58.220|PF02690|PTHR10010|PTHR10010:SF26|SSF109755|TIGR00704 BPTD_RS06390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004644|IPR005130|IPR005131|IPR029009 Allosteric substrate binding domain|Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0051539 G3DSA:3.30.1330.90|PF03313|PF03315|PTHR30182|PTHR30182:SF1|SSF143548|TIGR00720 BPTD_RS06395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003828 Protein of unknown function DUF208 PF02677|PTHR36701 BPTD_RS06400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005190|IPR013546|IPR023057 Glutamate-ammonia ligase adenylyltransferase, repeated domain|Glutamate-ammonia-ligase adenylyltransferase|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:3.30.460.10|MF_00802|PF03710|PF08335|PTHR30621|SSF81301|SSF81593 BPTD_RS06410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|PTHR15184|PTHR15184:SF34|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 BPTD_RS06415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PTHR10438|SSF52833|TIGR01068 BPTD_RS06420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001241|IPR002288|IPR003594|IPR005737|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA topoisomerase IV, subunit B, Gram-negative|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_00938|PF00204|PF00986|PF01751|PF02518|PR00418|PR01098|PS00177|PTHR10169|PTHR10169:SF45|SM00387|SM00433|SSF54211|SSF55874|SSF56719 BPTD_RS06425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025588 YcxB-like protein PF14317 BPTD_RS06430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002205|IPR005742|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase IV, subunit A, Gram-negative|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_00936|PF00521|PF03989|PTHR10169|PTHR10169:SF30|SM00434|SSF101904|SSF56719|TIGR01062 BPTD_RS06435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007349 Domain of unknown function DUF418 PF04235|PTHR30590|PTHR30590:SF2 BPTD_RS06440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS06445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF70|SSF103481 BPTD_RS06450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13417|SSF47616|SSF52833 BPTD_RS06460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001920|IPR015942 Asp/Glu racemase|Asp/Glu/hydantoin racemase GO:0006807|GO:0008152|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|PF01177|PTHR21198|SSF53681 BPTD_RS06465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030660 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|High-affinity branched-chain amino acid transport ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015658|GO:0015803|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039137|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS06470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS06475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851|IPR021807 ABC transporter, permease|High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal GO:0005215|GO:0006810|GO:0016020 PF02653|PF11862|PTHR30482|PTHR30482:SF9 BPTD_RS06480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF371 BPTD_RS06485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF12|SSF53822 BPTD_RS06490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS06495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003744 Protein of unknown function DUF165 PF02592|PTHR34300|PTHR34300:SF1|TIGR00697 BPTD_RS06500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PTHR11645|PTHR11645:SF0|SSF48179|SSF51735|TIGR00112 BPTD_RS06505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF13416|PS01037|PTHR30061|PTHR30061:SF7|SSF53850 BPTD_RS06510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR32243|PTHR32243:SF13|SSF161098 BPTD_RS06515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR030165 ABC transporter type 1, transmembrane domain MetI-like|sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0006810|GO:0015794|GO:0016020|GO:0055052 G3DSA:1.10.3720.10|PF00528|PTHR32243|PTHR32243:SF31|SSF161098 BPTD_RS06520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540 BPTD_RS06525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF12|SSF53822 BPTD_RS06530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010662|IPR029058 Alpha/Beta hydrolase fold|Putative hydrolase RBBP9/YdeN GO:0016787 G3DSA:3.40.50.1820|PF06821|SSF53474 BPTD_RS06535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS06545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006696 Protein of unknown function DUF423 PF04241|PTHR10584|PTHR10584:SF191 BPTD_RS06550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011979|IPR024467 Conserved hypothetical protein CHP02293|Domain of unknown function DUF2384 PF09722|TIGR02293 BPTD_RS06555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014914 RES domain PF08808|SM00953 BPTD_RS06560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PTHR30429|SSF53850 BPTD_RS06565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000262|IPR008259|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|PS00557|PTHR10578|PTHR10578:SF65|SSF51395 BPTD_RS06570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003817|IPR033177|IPR033178 Phosphatidylserine decarboxylase|Phosphatidylserine decarboxylase, prokaryotic type 1|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00662|PF02666|PTHR10067|TIGR00163 BPTD_RS06580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021729 Domain of unknown function DUF3298 G3DSA:3.90.640.20|PF11738 BPTD_RS06585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 G3DSA:3.90.1550.10|PF03099|PTHR12561|PTHR12561:SF7|SSF55681 BPTD_RS06590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.30.390.50 BPTD_RS06595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|SSF55729 BPTD_RS06600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|PTHR11260|PTHR11260:SF178|SSF47616|SSF52833 BPTD_RS06605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000889|IPR012336|IPR029760 Glutathione peroxidase|Glutathione peroxidase conserved site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00763|PTHR11592|SSF52833 BPTD_RS06610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010869 Protein of unknown function DUF1501 PF07394|PTHR15535|PTHR15535:SF21 BPTD_RS06615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014917 Protein of unknown function DUF1800 PF08811 BPTD_RS06620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13428|SSF48452 BPTD_RS06625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.40.50.10540|PF02515|SSF89796 BPTD_RS06630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|PTHR30041|PTHR30041:SF0|SSF52833|TIGR00014 BPTD_RS06635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|SSF52833 BPTD_RS06640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS06650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR024447 YXWGXW repeat PF12779 BPTD_RS06655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032808 DoxX family PF07681|PTHR33452 BPTD_RS06660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001570|IPR013856|IPR023612 Peptidase M4|Peptidase M4 domain|Peptidase M4, C-terminal GO:0004222|GO:0006508 G3DSA:1.10.390.10|G3DSA:3.10.170.10|PF01447|PF02868|PR00730|PTHR33794|SSF55486 BPTD_RS06670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|SSF51430 BPTD_RS06675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|PTHR31964:SF45|SSF52402 BPTD_RS06690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PR00035|PTHR11751|SM00345|SSF46785|SSF53383 BPTD_RS06695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|PTHR10146|SSF51419|TIGR00044 BPTD_RS06700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004625|IPR013749|IPR023479|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Pyridoxine kinase|Pyridoxine/pyridoxal/pyridoxamine kinase|Ribokinase-like GO:0008478|GO:0009443 G3DSA:3.40.1190.20|MF_01638|PF08543|PTHR10534|PTHR10534:SF6|SSF53613 BPTD_RS06710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006047|IPR012767|IPR013781|IPR013797|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, family 13, catalytic domain|Malto-oligosyltrehalose synthase|Maltooligosyl trehalose synthase, N-terminal GO:0003824|GO:0005975 G3DSA:1.10.10.470|G3DSA:1.10.150.200|G3DSA:3.20.20.80|G3DSA:3.30.1590.10|PF00128|PTHR10357|PTHR10357:SF166|SM00642|SSF51445|TIGR02401 BPTD_RS06715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003385|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 77 GO:0004134|GO:0005975 G3DSA:3.20.20.80|PF02446|PTHR32438|PTHR32438:SF5|SSF51445 BPTD_RS06725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006047|IPR012768|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853|IPR022567 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, C-terminal (DUF3459)|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold|Malto-oligosyltrehalose trehalohydrolase GO:0003824|GO:0004553|GO:0005975|GO:0005992 G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF00128|PF11941|PIRSF006337|PTHR10357|PTHR10357:SF110|SM00642|SSF51445|SSF81296|TIGR02402 BPTD_RS06730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004193|IPR006047|IPR011837|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 Glycogen debranching enzyme, GlgX type|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005980 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02922|PTHR10357|PTHR10357:SF74|SM00642|SSF51011|SSF51445|SSF81296|TIGR02100 BPTD_RS06735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|PTHR10357|PTHR10357:SF160|SM00642|SSF51011|SSF51445|SSF81296|TIGR01515 BPTD_RS06740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006047|IPR011009|IPR012810|IPR012811|IPR013780|IPR013781|IPR015902|IPR017853|IPR032091 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Maltogenic Amylase, C-terminal|Protein kinase-like domain|Trehalose synthase/alpha-amylase, N-terminal|Trehalose synthase/probable maltokinase, C-terminal domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.1200.10|G3DSA:3.90.400.10|PF00128|PF16657|PTHR10357|PTHR10357:SF164|SM00642|SSF51011|SSF51445|SSF56112|TIGR02456|TIGR02457 BPTD_RS06745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006047|IPR013781|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:3.20.20.80|PF00128|PTHR10357|PTHR10357:SF137|SM00642|SSF51445 BPTD_RS06750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017853|IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S|Glycoside hydrolase superfamily GO:0004553 PF11896|SSF51445 BPTD_RS06755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS06765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001375|IPR002471|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9, serine active site GO:0004252|GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|PS00708|PTHR22946|PTHR22946:SF0|SSF53474 BPTD_RS06770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021519 Protein of unknown function DUF3182 PF11379 BPTD_RS06775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|PTHR34697 BPTD_RS06780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS06790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001736|IPR025202|IPR030872 Cardiolipin synthase B|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0032049 G3DSA:3.30.870.10|MF_01917|PF13091|PTHR21248|PTHR21248:SF5|SM00155|SSF56024 BPTD_RS06795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|PTHR15822|PTHR15822:SF7|SSF56219 BPTD_RS06800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005149|IPR011991 Transcription regulator PadR, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03551|PTHR33169|PTHR33169:SF2|SSF46785 BPTD_RS06810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR005546|IPR006315|IPR011050|IPR012332 Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin virulence factor family GO:0007155|GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03797|PR01484|SM00869|SSF103515|SSF51126|TIGR01414 BPTD_RS06815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012337|IPR019993|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecB family nuclease, TM0106, putative|Ribonuclease H-like domain GO:0003676 G3DSA:3.40.50.300|PF13087|PF13482|PF13604|PTHR10887|SSF52540|SSF53098|TIGR03491 BPTD_RS06820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF29|SSF46785|SSF53850 BPTD_RS06825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30543|PTHR30543:SF1|SSF52218 BPTD_RS06830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|PTHR32308|PTHR32308:SF0|SSF51621 BPTD_RS06835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|PTHR11751:SF436|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS06840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003781|IPR013816|IPR016040|IPR016102|IPR032875 ATP-grasp fold, subdomain 2|CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0005524|GO:0048037 G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|PTHR33303|PTHR33303:SF3|SM00881|SSF51735|SSF52210|SSF56059 BPTD_RS06845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS06850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002020|IPR016142|IPR016143 Citrate synthase|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PTHR11739|PTHR11739:SF4|SSF48256 BPTD_RS06855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS06860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS06865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|SM00354|SSF47413|SSF53822 BPTD_RS06870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000573|IPR004431|IPR015928|IPR015937 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|PTHR11670|PTHR11670:SF27|SSF52016|TIGR00171 BPTD_RS06880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS06885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001354|IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF13378|PTHR13794|PTHR13794:SF58|SM00922|SSF51604|SSF54826 BPTD_RS06890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|PTHR21708|PTHR21708:SF24|SSF48179|SSF51735|TIGR00745 BPTD_RS06895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS06900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF327|SM00382|SSF52540 BPTD_RS06905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|PTHR30614:SF18|SSF161098|TIGR01726 BPTD_RS06910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|PTHR18966:SF208|SM00062|SSF53850 BPTD_RS06915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS06920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|PTHR30531|PTHR30531:SF0|SSF160544|TIGR00328 BPTD_RS06930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000897|IPR003593|IPR020006|IPR027417 AAA+ ATPase domain|Flagellar biosynthesis protein FlhF|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain GO:0003924|GO:0005525|GO:0006614|GO:0044781 G3DSA:1.20.120.140|G3DSA:3.40.50.300|PF00448|PTHR11564|PTHR11564:SF3|SM00382|SM00962|SSF52540|TIGR03499 BPTD_RS06935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007809 FlgN-like protein GO:0005515|GO:0044780 G3DSA:1.20.58.300|PF05130|SSF140566 BPTD_RS06940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007412|IPR031316 Anti-sigma-28 factor FlgM, C-terminal|Anti-sigma-28 factor, FlgM GO:0045892 PF04316|SSF101498|TIGR03824 BPTD_RS06945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|PTHR36307|SM00858|TIGR03170 BPTD_RS06950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001444|IPR006300 Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PF00460|PIRSF002889|PTHR30435|PTHR30435:SF12|TIGR01396 BPTD_RS06955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001444|IPR006299|IPR010930|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF2|TIGR01395 BPTD_RS06960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005648|IPR025963|IPR025965 Flagellar hook capping protein|FlgD Ig-like domain|FlgD Tudor-like domain PF03963|PF13860|PF13861|PTHR30435|PTHR30435:SF15 BPTD_RS06965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001444|IPR010930|IPR011491|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE GO:0071973 PF00460|PF06429|PF07559|PTHR30435|PTHR30435:SF1|SSF117143|TIGR03506 BPTD_RS06970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001444|IPR010930|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body/hook protein, C-terminal domain GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF18|SSF117143|TIGR03506 BPTD_RS06975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001444|IPR010930|IPR012834|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PTHR30435|PTHR30435:SF19|SSF117143|TIGR02488|TIGR03506 BPTD_RS06980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008|PTHR34933 BPTD_RS06985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010|PTHR30381|PTHR30381:SF1 BPTD_RS06990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002901|IPR013377|IPR019301 Flagellar protein FlgJ, N-terminal|Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain|Peptidoglycan hydrolase FlgJ GO:0004040|GO:0016798|GO:0044780 PF01832|PF10135|PR01002|PTHR33308|PTHR33308:SF3|SM00047|TIGR02541 BPTD_RS06995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002371|IPR010930 Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PF06429|PR01005|PTHR30033|PTHR30033:SF1|SSF64518|TIGR02492 BPTD_RS07000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001029|IPR013384 Flagellar hook-associated protein 3|Flagellin, D0/D1 domain GO:0005198|GO:0009424|GO:0071973 G3DSA:1.20.1330.10|PF00669|PTHR30244|PTHR30244:SF5|SSF64518|TIGR02550 BPTD_RS07005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003122|IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PTHR32089|PTHR32089:SF48|SM00283|SM00304|SSF47170|SSF58104 BPTD_RS07010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003122|IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF02203|PR00260|PTHR32089|PTHR32089:SF48|SM00283|SM00304|SSF47170|SSF58104 BPTD_RS07015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000014|IPR001610|IPR003660|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF08447|PR00260|PTHR32089|PTHR32089:SF63|SM00086|SM00091|SM00283|SM00304|SSF55785|SSF58104|TIGR00229 BPTD_RS07020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS07025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002010|IPR006303 Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021|GO:0044780 PF01311|PR00953|PTHR30065|PTHR30065:SF1|TIGR01400 BPTD_RS07030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|PTHR34040|PTHR34040:SF2|TIGR01402 BPTD_RS07035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01060|PS01061|PTHR30587|PTHR30587:SF0|TIGR01103 BPTD_RS07040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PF04347|PTHR38766|PTHR38766:SF1|TIGR03500 BPTD_RS07045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001172|IPR001543|IPR012826 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|PTHR22617|SSF101801|TIGR02480 BPTD_RS07050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PF02154|PIRSF002888|PR00955|PTHR30034|PTHR30034:SF0|SSF101801|SSF103039|TIGR01397 BPTD_RS07055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748|PTHR35091|PTHR35091:SF1 BPTD_RS07065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 BPTD_RS07075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012823|IPR018006 Flagellar FliJ, proteobacteria|Flagellar export FliJ GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PF02050|PIRSF019404|PR01004|PTHR38786|TIGR02473 BPTD_RS07080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000194|IPR003593|IPR005714|IPR020003|IPR020005|IPR027417|IPR032463 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI|ATPase, type III secretion system, FliI/YscN|Flagellar export ATPase FliI, clade 1|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257|GO:0044780|GO:0071973 G3DSA:3.40.50.300|PF00006|PS00152|PTHR15184|PTHR15184:SF9|SM00382|SSF52540|TIGR01026|TIGR03496 BPTD_RS07085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000563|IPR018035 Flagellar assembly protein FliH|Flagellar assembly protein FliH/Type III secretion system HrpE GO:0003774|GO:0009288|GO:0071973 PF02108|PR01003|PTHR34982|PTHR34982:SF1 BPTD_RS07090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PIRSF003161|PR00954|PTHR30534|PTHR30534:SF0|SSF48029|TIGR00207 BPTD_RS07095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PIRSF004862|PR01009|PTHR30046|PTHR30046:SF0|TIGR00206 BPTD_RS07100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049|PR01006|PTHR34653|TIGR00205 BPTD_RS07110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006135|IPR029025 Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0016020 G3DSA:3.40.1690.10|PF01312|PTHR30531|SSF160544 BPTD_RS07115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 BPTD_RS07125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008622 Flagellar protein FliT G3DSA:1.20.58.380|PF05400 BPTD_RS07130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003713 Flagellar protein FliS GO:0044780 G3DSA:1.20.120.340|PF02561|PIRSF039090|PTHR34773|SSF101116|TIGR00208 BPTD_RS07135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003481|IPR010809|IPR010810 Flagellar hook-associated 2, C-terminal|Flagellar hook-associated protein 2, N-terminal|Flagellin hook, IN motif GO:0006928|GO:0007155|GO:0009288|GO:0009424|GO:0044781 PF02465|PF07195|PF07196|PTHR30288|PTHR30288:SF0 BPTD_RS07140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005186 FlaG protein G3DSA:3.30.160.170|PF03646|PTHR37166|PTHR37166:SF1|SSF160214 BPTD_RS07145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001645|IPR004101|IPR013221|IPR018109 Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF08245|PIRSF001563|PS01011|PTHR11136|SSF53244|SSF53623|TIGR01499 BPTD_RS07150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|PTHR38687|PTHR38687:SF1|SSF110997 BPTD_RS07155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674|PTHR36926|PTHR36926:SF1 BPTD_RS07160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000836|IPR005854|IPR029055|IPR029057 Amidophosphoribosyltransferase|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13522|PIRSF000485|PTHR11907|PTHR11907:SF0|SSF53271|SSF56235|TIGR01134 BPTD_RS07165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003752|IPR023380 Disulphide bond formation protein DsbB-like domain|Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 G3DSA:1.20.1550.10|PF02600|SSF158442 BPTD_RS07170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|PTHR33508|PTHR33508:SF1|TIGR00427 BPTD_RS07175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002934|IPR003607|IPR006674|IPR010043|IPR013546 Bifunctional uridylyltransferase/uridylyl-removing enzyme|HD domain|HD/PDEase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase|Polymerase, nucleotidyl transferase domain GO:0006807|GO:0008773|GO:0016779 G3DSA:1.10.3210.10|G3DSA:3.30.460.10|G3DSA:3.30.70.260|MF_00277|PF01909|PF01966|PF08335|PIRSF006288|PTHR13734|PTHR13734:SF45|SM00471|SSF109604|SSF55021|SSF81301|SSF81593|TIGR01693 BPTD_RS07180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|PTHR10804|PTHR10804:SF75|SSF55920|TIGR00500 BPTD_RS07185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PTHR12534|SSF52313|TIGR01011 BPTD_RS07190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01127|PTHR11741|SSF46934|SSF54713|TIGR00116 BPTD_RS07195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|PTHR21499|PTHR21499:SF23|SSF53633|TIGR02075 BPTD_RS07200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|PTHR20982|SSF55194|TIGR00496 BPTD_RS07205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055 BPTD_RS07210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315|PTHR13773|PTHR13773:SF0 BPTD_RS07215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|PTHR30525|SSF51735|SSF55347|SSF69055|TIGR00243 BPTD_RS07220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PTHR22939|PTHR22939:SF78|SM00228|SSF50156|TIGR00054 BPTD_RS07225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|Surface antigen variable number GO:0019867|GO:0071709 G3DSA:2.40.160.50|MF_01430|PF01103|PF07244|PIRSF006076|PTHR12815|PTHR12815:SF11|TIGR03303 BPTD_RS07230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|PIRSF002094|PTHR35089|PTHR35089:SF1|SM00935|SSF111384 BPTD_RS07235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001451|IPR007691|IPR011004|IPR018357|IPR020573 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016740|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PF14602|PS00101|PTHR22572|PTHR22572:SF117|SSF51161|TIGR01853 BPTD_RS07240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|PTHR30272|SSF54637|TIGR01750 BPTD_RS07245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|MF_00387|PF00132|PF13720|PIRSF000456|PTHR23416|PTHR23416:SF8|SSF51161|TIGR01852 BPTD_RS07250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 MF_00392|PF02684|PTHR30372|PTHR30372:SF0|SSF53756|TIGR00215 BPTD_RS07255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001352|IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain GO:0003676|GO:0003723|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|PTHR10954|SSF53098 BPTD_RS07260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001537|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PTHR12029|SSF55315|SSF75217 BPTD_RS07265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005177|IPR026530 Bifunctional kinase-pyrophosphorylase|Phosphoenolpyruvate synthase regulatory protein GO:0005524|GO:0016772 MF_01062|PF03618|PTHR31756|PTHR31756:SF3 BPTD_RS07270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000121|IPR002192|IPR006319|IPR008279|IPR013815|IPR013816|IPR015813|IPR018274|IPR023151 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate synthase|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0008986|GO:0016301|GO:0016310|GO:0016772 G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000854|PS00370|PS00742|PTHR22931|PTHR22931:SF7|SSF51621|SSF52009|SSF56059|TIGR01418 BPTD_RS07275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|PTHR11922|SSF52317 BPTD_RS07280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012340 Nucleic acid-binding, OB-fold G3DSA:2.40.50.140 BPTD_RS07285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001107|IPR001972|IPR032435 Band 7 domain|Band 7, C-terminal extension|Stomatin family GO:0016020 PF01145|PF16200|PR00721|PTHR10264|PTHR10264:SF27|SM00244|SSF117892 BPTD_RS07295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 BPTD_RS07300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|PTHR30308|PTHR30308:SF2|SSF74982|TIGR00086 BPTD_RS07305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005031|IPR023393 Coenzyme Q-binding protein COQ10, START domain|START-like domain G3DSA:3.30.530.20|PF03364|PTHR12901|PTHR12901:SF7|SSF55961 BPTD_RS07310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005346|IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|RnfH protein G3DSA:3.10.20.280|MF_00460|PF03658|PTHR37483|PTHR37483:SF1|SSF54285 BPTD_RS07315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|PTHR10909|PTHR10909:SF305|SSF47203|SSF56645 BPTD_RS07320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029045|IPR032259 ClpP/crotonase-like domain|Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 G3DSA:3.90.226.10|PF16113|PTHR11941|PTHR11941:SF53|SSF52096 BPTD_RS07325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002204|IPR006115|IPR008927|IPR011548|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase|3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0008442|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|PTHR22981|SSF48179|SSF51735|TIGR01692 BPTD_RS07330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR12418|PTHR12418:SF28|SSF54637|TIGR00369 BPTD_RS07335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008217 Ccc1 family PF01988|PTHR31851 BPTD_RS07340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001585|IPR004730|IPR013785|IPR018225 Aldolase-type TIM barrel|Transaldolase type 1|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004801|GO:0005737|GO:0005975|GO:0006098 G3DSA:3.20.20.70|MF_00492|PF00923|PS00958|PS01054|PTHR10683|PTHR10683:SF18|SSF51569|TIGR00874 BPTD_RS07350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00099|PTHR11405|SM01097|SSF52021|SSF52317|TIGR01368 BPTD_RS07355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|PTHR11405|PTHR11405:SF47|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 BPTD_RS07365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|SM00855|SSF53254 BPTD_RS07370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850 BPTD_RS07375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF150|SM00382|SSF50331|SSF52540 BPTD_RS07380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30183|SSF161098 BPTD_RS07385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001633|IPR029787 EAL domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PTHR33121|PTHR33121:SF13|SM00052|SSF141868|SSF55073 BPTD_RS07400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|PTHR21085|SSF103263|TIGR00033 BPTD_RS07405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726 BPTD_RS07410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004435|IPR027417 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525|GO:0006777 G3DSA:3.40.50.300|PF03205|PTHR19136|PTHR19136:SF82|SSF52540|TIGR00176 BPTD_RS07415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001453|IPR005110|IPR005111 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PTHR10192|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 BPTD_RS07420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013482|IPR025877|IPR029044 MobA-like NTP transferase|Molybdenum cofactor guanylyltransferase|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0006777 G3DSA:3.90.550.10|MF_00316|PF12804|PTHR19136|PTHR19136:SF81|SSF53448|TIGR02665 BPTD_RS07425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000808|IPR002744|IPR019591|IPR027417 Domain of unknown function DUF59|Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PS01215|PTHR23264|PTHR23264:SF19|SSF117916|SSF52540 BPTD_RS07430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021736 Protein of unknown function DUF3305 PF11749 BPTD_RS07435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021735 Protein of unknown function DUF3306 PF11748 BPTD_RS07440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF00037|PF13187|PS00198|PTHR24960|PTHR24960:SF43|SSF54862 BPTD_RS07445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR020945 DMSO/Nitrate reductase chaperone G3DSA:1.10.3480.10|PF02613|PTHR34227|PTHR34227:SF4|SSF89155 BPTD_RS07450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014177 Putative formate dehydrogenase, TAT signal-containing PIRSF036704 BPTD_RS07455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006656|IPR006657|IPR006963|IPR009010|IPR027467 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00551|PTHR11615|PTHR11615:SF140|SM00926|SSF50692|SSF53706 BPTD_RS07460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.30.70.20|PTHR11938|PTHR11938:SF96|SSF54862 BPTD_RS07465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10 BPTD_RS07470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006471|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Formate dehydrogenase, gamma subunit GO:0008863|GO:0009055|GO:0009326|GO:0016020|GO:0016021|GO:0022904|GO:0045333 G3DSA:1.20.950.20|PF01292|PTHR30074|PTHR30074:SF2|SSF81342|TIGR01583 BPTD_RS07480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR011991|IPR024370 PBP domain|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF12727|PTHR38431|SSF46785|SSF53850 BPTD_RS07485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30183|PTHR30183:SF4|SSF161098 BPTD_RS07490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 BPTD_RS07495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR37945|SSF53850 BPTD_RS07500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR015937|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF38|SSF53732|TIGR00170 BPTD_RS07505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000573|IPR004431|IPR015928|IPR015937 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|PTHR11670|PTHR11670:SF27|SSF52016|TIGR00171 BPTD_RS07510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001804|IPR004429|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|PTHR11835|PTHR11835:SF35|SM01329|SSF53659|TIGR00169 BPTD_RS07515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000319|IPR000534|IPR011534|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, conserved site|Aspartate-semialdehyde dehydrogenase, gamma-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0006520|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PS01103|PTHR10174|PTHR10174:SF116|SM00859|SSF51735|SSF55347|TIGR01745 BPTD_RS07520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018392|IPR020012 LysM domain|Motility protein FimV, N-terminal G3DSA:3.10.350.10|TIGR03505 BPTD_RS07525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|PTHR11142|SSF55120|TIGR00071 BPTD_RS07530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389|IPR019546|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0006810|GO:0030288 PF03480|PIRSF039026|PTHR33376|PTHR33376:SF5|SSF53850|TIGR01409 BPTD_RS07535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011|PTHR35011:SF4 BPTD_RS07540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808|PTHR33362|PTHR33362:SF7 BPTD_RS07545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001240|IPR011060|IPR013785 Aldolase-type TIM barrel|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004640|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00135|PF00697|PTHR22854|PTHR22854:SF6|SSF51366 BPTD_RS07555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000160|IPR003018|IPR029016|IPR029787 GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase GO:0005515 G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00990|PF13185|PTHR10799|PTHR10799:SF710|SM00065|SM00267|SSF55073|SSF55781|TIGR00254 BPTD_RS07565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010723 HemN, C-terminal PF06969|PTHR13932|PTHR13932:SF6|SSF102114 BPTD_RS07580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 BPTD_RS07585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|PTHR11451|PTHR11451:SF31|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 BPTD_RS07590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001288|IPR019813|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|PTHR10938|SSF54364|SSF55200|TIGR00168 BPTD_RS07595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004215|IPR004218|IPR006284|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Glutathione synthetase, prokaryotic|Pre-ATP-grasp domain|Prokaryotic glutathione synthetase, ATP-binding|Prokaryotic glutathione synthetase, N-terminal GO:0003824|GO:0004363|GO:0005524|GO:0005829|GO:0006750 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00162|PF02951|PF02955|PTHR21621|PTHR21621:SF4|SSF52440|SSF56059|TIGR01380 BPTD_RS07600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 G3DSA:3.40.50.510|PF03610|PTHR33799|SSF53062 BPTD_RS07605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000032|IPR001020|IPR002114 Phosphocarrier HPr protein-like|Phosphotransferase system, HPr histidine phosphorylation site|Phosphotransferase system, HPr serine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|PS00589|PTHR33705|PTHR33705:SF2|SSF55594|TIGR01003 BPTD_RS07610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000121|IPR006318|IPR008279|IPR008731|IPR015813|IPR018274|IPR023151|IPR024692 PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphotransferase system, enzyme I|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008965|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PIRSF000732|PR01736|PS00370|PS00742|PTHR22931|PTHR22931:SF28|SSF47831|SSF51621|SSF52009|TIGR01417 BPTD_RS07620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003462|IPR016040|IPR023401 NAD(P)-binding domain|Ornithine cyclodeaminase, N-terminal|Ornithine cyclodeaminase/mu-crystallin G3DSA:3.30.1780.10|G3DSA:3.40.50.720|PF02423|PIRSF001439|PTHR13812|PTHR13812:SF19|SSF51735 BPTD_RS07625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF7|SSF53822 BPTD_RS07630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638|IPR014337 Ectoine/Hydroxyectoine-binding protein EhuB|Solute-binding protein family 3/N-terminal domain of MltF GO:0005886|GO:0033294|GO:0051470|GO:0051471 G3DSA:3.40.190.10|PF00497|PTHR18966|PTHR18966:SF216|SM00062|SSF53850|TIGR02995 BPTD_RS07635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065|IPR014342 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Ectoine/hydroxyectoine ABC transporter, permease protein EhuC GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|SSF161098|TIGR01726|TIGR03004 BPTD_RS07640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065|IPR014341 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Ectoine/hydroxyectoine ABC transporter, permease protein EhuD GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|SSF161098|TIGR01726|TIGR03003 BPTD_RS07645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF327|SM00382|SSF52540 BPTD_RS07650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|PTHR33337|PTHR33337:SF11|SSF51316 BPTD_RS07660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006139|IPR006140|IPR016040|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00671|PTHR10996|PTHR10996:SF163|SSF51735|SSF52283 BPTD_RS07665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|SM00834|TIGR02605 BPTD_RS07670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003211 AmiS/UreI transporter GO:0006810|GO:0016020 PF02293 BPTD_RS07675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|G3DSA:3.10.28.20|PF03069|PTHR31891|PTHR31891:SF1|SSF141130 BPTD_RS07680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000792|IPR011991|IPR016032|IPR029016 GAF domain-like|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|SM00421|SSF46894|SSF55781 BPTD_RS07685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011037|IPR015808 Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain G3DSA:2.40.33.20|PTHR36930|PTHR36930:SF1|SSF50800 BPTD_RS07690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000771|IPR006412|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, Calvin cycle subtype|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|PTHR30304|SSF51569|TIGR00167|TIGR01521 BPTD_RS07695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|PTHR33337|SSF51316 BPTD_RS07700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001636|IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PS01058|PTHR11609|PTHR11609:SF6|SSF56104|TIGR00081 BPTD_RS07705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR031451 mRNA interferase MqsR GO:0009372|GO:0017148|GO:0042710 PF15723 BPTD_RS07710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001387|IPR010982|IPR022452|IPR022453|IPR032758 Antitoxin MqsA|Antitoxin MqsA/igA-2|Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Zinc finger, MqsA-type GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF15731|PTHR36511|PTHR36511:SF3|SM00530|SSF47413|TIGR03830|TIGR03831 BPTD_RS07715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003752|IPR023380 Disulphide bond formation protein DsbB-like domain|Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 G3DSA:1.20.1550.10|PF02600|SSF158442 BPTD_RS07720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000031|IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE|Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189|GO:0034023 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|PTHR23046|PTHR23046:SF2|SM01001|SSF52255|TIGR01162 BPTD_RS07725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|PTHR11609|PTHR11609:SF5|SSF51246|SSF52440|SSF56059|TIGR01161 BPTD_RS07730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005145|IPR006070|IPR010923|IPR017945 DHBP synthase RibB-like alpha/beta domain|Putative GTP-binding controlling metal-binding domain|YrdC-like domain|tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 GO:0003725 G3DSA:3.90.870.10|PF01300|PF03481|PIRSF004930|PTHR17490|PTHR17490:SF3|SSF55821|TIGR00057 BPTD_RS07735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR30085|PTHR30085:SF5|SM00062|SSF53850 BPTD_RS07740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS07745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006035|IPR023696 Ureohydrolase|Ureohydrolase domain GO:0046872 G3DSA:3.40.800.10|PF00491|PIRSF036979|PTHR11358|PTHR11358:SF26|SSF52768 BPTD_RS07750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001320|IPR001638 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF GO:0004970|GO:0016020 G3DSA:3.40.190.10|PF00497|PTHR18966|PTHR18966:SF191|SM00062|SM00079|SSF53850 BPTD_RS07755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|SSF161098|TIGR01726 BPTD_RS07760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF474|SM00382|SSF52540 BPTD_RS07765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011766|IPR012001|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PF02776|PTHR18968|PTHR18968:SF86|SSF52518 BPTD_RS07770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PTHR13078|SSF54637 BPTD_RS07775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00073|PTHR10909|PTHR10909:SF307|SSF47203|SSF56645 BPTD_RS07780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF120|SSF52467|SSF52518 BPTD_RS07785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF15|SSF46785|SSF53850 BPTD_RS07790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002104|IPR004107|IPR010998|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, Lambda-type, N-terminal|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01807|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF47823|SSF56349|TIGR02225 BPTD_RS07795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004369|IPR007214 Prolyl-tRNA editing protein, YbaK/EbsC|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PIRSF006181|PTHR30411|PTHR30411:SF0|SSF55826|TIGR00011 BPTD_RS07800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002818|IPR006286|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|Peptidase C56, PfpI GO:0016798 G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF112|SSF52317|TIGR01382 BPTD_RS07805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR027373 Ribbon-helix-helix domain PF13467 BPTD_RS07810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001967|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 G3DSA:3.40.710.10|PF00768|PR00725|PTHR21581|PTHR21581:SF8|SSF56601 BPTD_RS07825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF115|SSF103473 BPTD_RS07830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019925|IPR027417 DNA repair protein, predicted|P-loop containing nucleoside triphosphate hydrolase PF12705|SSF52540|TIGR03623 BPTD_RS07835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000212|IPR011335|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF12705|PF13361|PTHR11070|PTHR11070:SF24|SSF52540|SSF52980 BPTD_RS07840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR008921|IPR012763|IPR022754|IPR027417 AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF13177|PTHR11669|PTHR11669:SF0|SM00382|SSF48019|SSF52540|TIGR02397 BPTD_RS07845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004401 Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|PTHR33449|PTHR33449:SF1|SSF82607|TIGR00103 BPTD_RS07850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000093|IPR006171|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Toprim domain GO:0003677|GO:0006281|GO:0006310 MF_00017|PF02132|PF13662|PTHR30446|PTHR30446:SF0|SM00493|SSF111304|TIGR00615 BPTD_RS07855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PF04228|PTHR30168|SSF55486 BPTD_RS07875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|PTHR17490|PTHR17490:SF7|SSF55821|TIGR00057 BPTD_RS07880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008311|IPR011044|IPR015943 Quinoprotein amine dehydrogenase, beta chain-like|Uncharacterised conserved protein UCP028101|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF07433|PIRSF028101|SSF50969 BPTD_RS07890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PF09375 BPTD_RS07895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009056|IPR010538 Cytochrome c-like domain|Di-haem oxidoreductase, putative peroxidase GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF06537|PIRSF028099|PTHR30600|PTHR30600:SF4|SSF46626 BPTD_RS07900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PF09375 BPTD_RS07905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|PTHR40057|PTHR40057:SF1|SSF54909 BPTD_RS07910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30543|PTHR30543:SF6|SSF52218 BPTD_RS07915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009923|IPR025543 Dodecin|Dodecin-like G3DSA:3.30.1660.10|PF07311|PTHR39324|PTHR39324:SF1|SSF89807 BPTD_RS07920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PS00486|PTHR11361|PTHR11361:SF86|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 BPTD_RS07925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003347 JmjC domain G3DSA:2.60.120.650|PF08007|PTHR13096|SM00558|SSF51197 BPTD_RS07930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000259|IPR008966 Adhesion domain|Fimbrial-type adhesion domain GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF16970|PTHR33420|SSF49401 BPTD_RS07935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010653 NlpB/DapX lipoprotein PF06804 BPTD_RS07940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002220|IPR005263|IPR013785|IPR020624|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|PTHR12128|PTHR12128:SF34|SM01130|SSF51569|TIGR00674 BPTD_RS07950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS07955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001320|IPR001638|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0004970|GO:0005215|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|SM00062|SM00079|SSF53850 BPTD_RS07960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|PTHR30614:SF13|SSF161098|TIGR01726 BPTD_RS07965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF569|SM00382|SSF52540 BPTD_RS07970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF0|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 BPTD_RS07975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003716|IPR006110|IPR012293 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|PTHR34476|SM01409|SSF63562|TIGR00690 BPTD_RS07980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|PTHR23117|PTHR23117:SF13|SM00072|SSF52540|TIGR03263 BPTD_RS07985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR35008|PTHR35008:SF4|SSF46626 BPTD_RS07990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008168|IPR009056|IPR024167 Cytochrome c, class IC|Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF13442|PIRSF000005|PR00605|PTHR33751|PTHR33751:SF2|SSF46626 BPTD_RS07995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SM00822|SSF51735 BPTD_RS08000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|PTHR21666|SSF54001 BPTD_RS08005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000845|IPR011271|IPR018017|IPR018953 AMP nucleosidase|AMP nucleoside phosphorylase, N-terminal|Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0008714|GO:0009116|GO:0044209 G3DSA:3.30.1730.10|G3DSA:3.40.50.1580|MF_01932|PF01048|PF10423|PTHR21234|PTHR21234:SF11|SSF53167|TIGR01717 BPTD_RS08010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36511|SM00530|SSF47413 BPTD_RS08025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|PTHR30636|TIGR00255 BPTD_RS08030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001247|IPR002381|IPR015847|IPR018336|IPR020568|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|PNPase/RNase PH domain|Ribonuclease PH, conserved site|Ribonuclease phosphorolytic, bacterial-type|Ribosomal protein S5 domain 2-type fold GO:0000049|GO:0004549|GO:0008033 G3DSA:3.30.230.70|MF_00564|PF01138|PF03725|PS01277|PTHR11953|PTHR11953:SF0|SSF54211|SSF55666|TIGR01966 BPTD_RS08035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS08040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30419|PTHR30419:SF2|SSF46785|SSF53850 BPTD_RS08050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.10.580.10|G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PTHR33121|PTHR33121:SF10|SM00052|SM00267|SSF141868|SSF54631|SSF55073|TIGR00254 BPTD_RS08055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0016787|GO:0017111 G3DSA:3.90.950.10|MF_01405|PF01725|PTHR11067|PTHR11067:SF9|SSF52972|TIGR00042 BPTD_RS08060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PTHR13932|PTHR13932:SF7|SM00729|SSF102114|TIGR00539 BPTD_RS08070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001637|IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase class-I, adenylation site|Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PS00182|PTHR20852|PTHR20852:SF15|SM01230|SSF54368|SSF55931|TIGR00653 BPTD_RS08075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08448|PR00344|PTHR24423|PTHR24423:SF488|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BPTD_RS08080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR010114|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, nitrogen regulation NR(I)|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0006808|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF15|SM00382|SM00448|SSF46689|SSF52172|SSF52540|TIGR01818 BPTD_RS08085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30126|PTHR30126:SF4|SSF46785|SSF53850 BPTD_RS08090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003829|IPR011051|IPR012093|IPR014710 Pirin|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PIRSF006232|PTHR13903|PTHR13903:SF7|SSF51182 BPTD_RS08095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|PTHR13903|PTHR13903:SF4|SSF51182 BPTD_RS08100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF282|SM00382|SSF52540 BPTD_RS08110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30183|PTHR30183:SF2|SSF161098 BPTD_RS08115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|PTHR30006|PTHR30006:SF4|SSF53850 BPTD_RS08120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001433|IPR001709|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|PTHR19370|PTHR19370:SF98|SSF52343|SSF63380 BPTD_RS08125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF20|SSF46785|SSF53850 BPTD_RS08135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001395|IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00798|PTHR11732|PTHR11732:SF100|SSF51430 BPTD_RS08145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006056|IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|RidA family|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|SSF55298|TIGR00004 BPTD_RS08150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001650|IPR004609|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 ATP-dependent DNA helicase RecG|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0004003|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|PTHR24031|PTHR24031:SF249|SM00487|SM00490|SSF50249|SSF52540|TIGR00643 BPTD_RS08155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF15|SSF46785|SSF53850 BPTD_RS08160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 BPTD_RS08165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|PTHR11699:SF27|SSF53720|TIGR01722 BPTD_RS08170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002177|IPR008331|IPR009078|IPR012347|IPR023188 DNA-binding protein Dps|DNA-binding protein Dps, conserved site|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0016722|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|PS00819|PTHR30295|PTHR30295:SF6|SSF47240 BPTD_RS08175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BPTD_RS08180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF53756 BPTD_RS08190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PR00164|PTHR30413 BPTD_RS08195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF117|SM00382|SSF52540 BPTD_RS08200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PF02706 BPTD_RS08205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR011990|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF48452|SSF53756 BPTD_RS08215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619|PTHR33619:SF3 BPTD_RS08220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|PTHR11374|PTHR11374:SF25|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 BPTD_RS08225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|PTHR10366|PTHR10366:SF472|SSF51735 BPTD_RS08230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 PF05159 BPTD_RS08235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 PF05159 BPTD_RS08240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR020846 Major facilitator superfamily domain SSF103473 BPTD_RS08250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PTHR10342|PTHR10342:SF241|SSF53649 BPTD_RS08255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF12710|SSF56784 BPTD_RS08260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025738 Aerotolerance-related protein BatD PF13584|PTHR40940|PTHR40940:SF1 BPTD_RS08265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002035|IPR011990|IPR013105|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain|von Willebrand factor, type A GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.410|PF00092|PF07719|PTHR22550|PTHR22550:SF8|SM00028|SM00327|SSF48452|SSF53300 BPTD_RS08270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PTHR22550|PTHR22550:SF12|SM00327|SSF53300 BPTD_RS08275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR33608|PTHR33608:SF6 BPTD_RS08280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF148|SSF52540 BPTD_RS08290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 BPTD_RS08295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS08300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 BPTD_RS08305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005496|IPR022301 Integral membrane protein TerC|Integral membrane protein YjbE GO:0016021 PF03741|PTHR30060|TIGR03717 BPTD_RS08310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PTHR30482|PTHR30482:SF10 BPTD_RS08320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS08325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS08330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|SSF46689|SSF48498 BPTD_RS08335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004099|IPR016156|IPR023753|IPR028202 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Reductase, C-terminal GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF07992|PF14759|PR00368|PR00411|PTHR22912|PTHR22912:SF180|SSF51905|SSF55424 BPTD_RS08340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|SSF53649 BPTD_RS08350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24322|PTHR24322:SF320|SSF51735 BPTD_RS08355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR011623 7TM-DISM receptor, extracellular domain, type 1|Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|PF07695|PTHR24421|SSF55874 BPTD_RS08370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 BPTD_RS08375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005546|IPR006315|IPR011050|IPR013425 Autotransporter beta-domain|Autotransporter-associated beta strand repeat|Outer membrane autotransporter barrel|Pectin lyase fold/virulence factor GO:0019867 G3DSA:2.40.128.130|PF03797|PF12951|PTHR35037|PTHR35037:SF3|SM00869|SSF103515|SSF51126|TIGR01414 BPTD_RS08380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36511|PTHR36511:SF2|SM00530|SSF47413 BPTD_RS08385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009387 Toxin HigB-2 PF06296|PIRSF039032 BPTD_RS08390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF14497|PTHR11260|PTHR11260:SF154|SSF47616|SSF52833 BPTD_RS08395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|PTHR30468|PTHR30468:SF2|SSF51197 BPTD_RS08400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005119 LysR, substrate-binding G3DSA:3.40.190.10|PF03466|PTHR30126|SSF53850 BPTD_RS08405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS08410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|SSF51735 BPTD_RS08415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000262|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|PTHR10578|SSF51395 BPTD_RS08420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|SSF56529 BPTD_RS08425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24322|SSF51735 BPTD_RS08430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 BPTD_RS08435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS08440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF3|SSF46785|SSF53850 BPTD_RS08445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS08460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005025|IPR014063|IPR029039 Arsenate resistance ArsH|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30041|PTHR30041:SF1|SSF52218|TIGR02690 BPTD_RS08480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF126|SSF103473 BPTD_RS08485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|PTHR33154:SF5|SM00418|SSF46785 BPTD_RS08495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS08500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF378|SM00822|SSF51735 BPTD_RS08505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850 BPTD_RS08515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS08525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001516|IPR001750|IPR007182|IPR025383 Domain of unknown function DUF4040|NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|Na+/H+ antiporter MnhB subunit-related protein PF00361|PF00662|PF04039|PF13244|PR01434|PTHR22773|PTHR22773:SF46 BPTD_RS08530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PF00420|PTHR34583|PTHR34583:SF1 BPTD_RS08535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF00361|PTHR22773|PTHR22773:SF49 BPTD_RS08540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PF01899|PIRSF019239|PTHR34584|PTHR34584:SF1 BPTD_RS08545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PF04066|PIRSF028784|PTHR34702|PTHR34702:SF1 BPTD_RS08550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 PF03334|PTHR34703|PTHR34703:SF1|TIGR01300 BPTD_RS08555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF12710|SSF56784 BPTD_RS08570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|PTHR11079|SSF53927 BPTD_RS08575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003507|IPR027461|IPR027478|IPR029062 Class I glutamine amidotransferase-like|LD-carboxypeptidase A, C-terminal domain|Murein tetrapeptide carboxypeptidase, N-terminal domain|Peptidase family S66 G3DSA:3.40.50.10740|G3DSA:3.50.30.60|PF02016|PIRSF028757|PTHR30237|PTHR30237:SF2|SSF141986|SSF52317 BPTD_RS08580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF86|SSF52096 BPTD_RS08585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808|PTHR33362|PTHR33362:SF7 BPTD_RS08590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011 BPTD_RS08595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026|PTHR33376|PTHR33376:SF5 BPTD_RS08600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF38|SM00382|SSF52540 BPTD_RS08605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 BPTD_RS08610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850 BPTD_RS08615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|SSF161098 BPTD_RS08620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SSF53850 BPTD_RS08625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000640|IPR001498|IPR009022|IPR015269|IPR020568|IPR020569|IPR023582 Elongation factor G, III-V domain|Impact family|Impact, N-terminal|Ribosomal protein S5 domain 2-type fold|Translation elongation factor EFG, V domain|Uncharacterised domain UPF0029, Impact, C-terminal|Uncharacterised protein family UPF0029, Impact, conserved site G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|PF09186|PS00910|PTHR16301|SSF54211|SSF54980 BPTD_RS08635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PR00421|PS00194|PTHR10438|PTHR10438:SF266|SSF52833 BPTD_RS08645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006043|IPR026033|IPR029940 AzgA purine transporter|Purine permease PbuG-like|Xanthine/uracil/vitamin C permease GO:0005215|GO:0005345|GO:0006810|GO:0006863|GO:0016020|GO:0055085 PF00860|PIRSF005353|PTHR11119|PTHR11119:SF9 BPTD_RS08650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000905|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PTHR11735|PTHR11735:SF6|SSF53067|TIGR00329|TIGR03723 BPTD_RS08655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS08660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|PTHR30309|PTHR30309:SF0|SM01207|TIGR00023 BPTD_RS08665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|PTHR30457|SSF64167|TIGR00087 BPTD_RS08670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|PTHR11579|SSF53335|TIGR00080 BPTD_RS08675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011055|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|PTHR21666|PTHR21666:SF222|SM00257|SSF51261 BPTD_RS08680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012337|IPR019288 Predicted 3'-5' exonuclease, PolB-like|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF10108|SSF53098 BPTD_RS08690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010239 Conserved hypothetical protein CHP02001 PF09694|TIGR02001 BPTD_RS08695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001566|IPR010280|IPR012340|IPR029063|IPR030390|IPR030391 (Uracil-5)-methyltransferase family|23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|RNA methyltransferase TrmA, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003723|GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|MF_01010|PF05958|PS01230|PS01231|PTHR11061|PTHR11061:SF30|SSF50249|SSF53335|TIGR00479 BPTD_RS08700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000551|IPR009061|IPR011789|IPR015358 Cu(I)-responsive transcriptional regulator|MerR-type HTH domain|Putative DNA-binding domain|Transcription regulator MerR, DNA binding GO:0003677|GO:0003700|GO:0005507|GO:0006355|GO:0045893 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PS00552|PTHR30204|PTHR30204:SF16|SM00422|SSF46955|TIGR02044 BPTD_RS08705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006121|IPR017969 Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|PS01047|SSF55008 BPTD_RS08710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002109|IPR011767|IPR011906|IPR012336|IPR013740|IPR014025 Glutaredoxin|Glutaredoxin active site|Glutaredoxin domain|Glutaredoxin subgroup|Redoxin|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0016491|GO:0045454 G3DSA:3.40.30.10|PF00462|PF08534|PR00160|PS00195|PTHR10430|PTHR10430:SF19|SSF52833|TIGR02190 BPTD_RS08715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PTHR22912|PTHR22912:SF176|SSF51905|SSF55424 BPTD_RS08720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007473|IPR029063 Ribosomal RNA large subunit methyltransferase J|S-adenosyl-L-methionine-dependent methyltransferase GO:0008649|GO:0070475 G3DSA:3.40.50.150|MF_00934|PF04378|PTHR37426|PTHR37426:SF1|SSF53335 BPTD_RS08725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004129|IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|Glycerophosphoryl diester phosphodiesterase|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081|GO:0008889 G3DSA:3.20.20.190|PF03009|PTHR23344|PTHR23344:SF20|SSF51695 BPTD_RS08730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000297|IPR023058|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF13145|PF13624|PS01096|PTHR10657|PTHR10657:SF11|SSF109998|SSF54534 BPTD_RS08735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|SSF52266 BPTD_RS08740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF509|SSF52540 BPTD_RS08745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|SM00749 BPTD_RS08755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009760 Protein of unknown function DUF1328 GO:0005886 MF_01361|PF07043|PIRSF036466 BPTD_RS08760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008462|IPR026042 CsbD-like|Stress response protein YjbJ G3DSA:1.10.1470.10|PF05532|PIRSF039008|PTHR34977|SSF69047 BPTD_RS08765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003135|IPR004101|IPR011810|IPR013221|IPR013651|IPR013816|IPR018109 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, RimK-type|ATP-grasp fold, subdomain 2|Cyanophycin synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009059|GO:0009396|GO:0016874 G3DSA:3.30.470.20|G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02222|PF02875|PF08245|PF08443|PS01011|PTHR23135|PTHR23135:SF18|SSF53244|SSF53623|SSF56059|TIGR02068 BPTD_RS08770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004101|IPR005479|IPR011810|IPR013221|IPR013816 ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Cyanophycin synthetase|Mur ligase, C-terminal|Mur ligase, central GO:0005524|GO:0009058|GO:0009059|GO:0016874 G3DSA:3.30.470.20|G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02786|PF02875|PF08245|PTHR23135|PTHR23135:SF18|SSF53244|SSF53623|SSF56059|TIGR02068 BPTD_RS08780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015005 Domain of unknown function DUF1854 PF08909 BPTD_RS08785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007434|IPR016181 Acyl-CoA N-acyltransferase|Peptidogalycan biosysnthesis/recognition G3DSA:3.40.630.30|PF04339|PTHR31384|PTHR31384:SF34|SSF55729 BPTD_RS08790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007402|IPR009078|IPR011197 Ferritin-like superfamily|Protein of unknown function DUF455|Uncharacterised conserved protein UCP012318 PF04305|PIRSF012318|PTHR21496|PTHR21496:SF10|SSF47240 BPTD_RS08795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002477|IPR011757|IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Lytic transglycosylase MltB|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF13406|PTHR30163|PTHR30163:SF4|SSF47090|SSF53955|TIGR02283 BPTD_RS08800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 BPTD_RS08805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PTHR30154|PTHR30154:SF28|SM00344|SSF46785|SSF54909 BPTD_RS08820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|PTHR14359|PTHR14359:SF20|SSF102645|SSF52507|TIGR00521 BPTD_RS08825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|PTHR33695|PTHR33695:SF1|TIGR00077 BPTD_RS08830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|Zinc finger, FPG/IleRS-type GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|PTHR11946|PTHR11946:SF11|SSF47323|SSF50677|SSF52374|TIGR00392 BPTD_RS08835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465|IPR023468 FAD synthetase|Riboflavin kinase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|PTHR22749|PTHR22749:SF0|SM00904|SSF52374|SSF82114|TIGR00083 BPTD_RS08840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001678|IPR023267|IPR029063 RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01189|PR02008|PTHR22807|PTHR22807:SF39|SSF53335 BPTD_RS08845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS08855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002560|IPR005804 Fatty acid desaturase domain|Transposase IS204/IS1001/IS1096/IS1165, DDE domain GO:0006629 PF00487|PF01610|PTHR11351|PTHR11351:SF33 BPTD_RS08860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000212|IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF7|SSF52540 BPTD_RS08865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.40.170.20|PF07715|SM00965|SSF56935 BPTD_RS08870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF49|SM00382|SSF52540 BPTD_RS08875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002052|IPR004556|IPR007848|IPR017127|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Ribosomal protein L3-specific, glutamine-N5-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0005622|GO:0006479|GO:0008168|GO:0008276|GO:0009007|GO:0032259|GO:0032775 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02125|PF05175|PIRSF037167|PS00092|PTHR18895|PTHR18895:SF66|SSF53335|TIGR00536|TIGR03533 BPTD_RS08880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002933|IPR005941|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0008152|GO:0009014|GO:0009089|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01690|PF01546|PF07687|PTHR11014|PTHR11014:SF106|SSF53187|SSF55031|TIGR01246 BPTD_RS08885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001451|IPR005664|IPR011004|IPR018357|IPR023180 Hexapeptide repeat|Hexapeptide transferase, conserved site|Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family|Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1|Trimeric LpxA-like GO:0008666|GO:0009089|GO:0016740 G3DSA:1.10.166.10|G3DSA:2.160.10.10|MF_00811|PF00132|PF14602|PF14805|PS00101|PTHR19136|PTHR19136:SF52|SSF51161|TIGR00965 BPTD_RS08900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025421 Protein of unknown function DUF4148 PF13663 BPTD_RS08905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR005546|IPR006315 Autotransporter beta-domain|Outer membrane autotransporter barrel|Pertactin virulence factor family GO:0007155|GO:0019867 G3DSA:2.40.128.130|PF03797|PR01484|SM00869|SSF103515|TIGR01414 BPTD_RS08920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 BPTD_RS08925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010323|IPR011990 Protein of unknown function DUF924|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.20.58.320|G3DSA:1.25.40.10|PF06041|PTHR23004|PTHR23004:SF7|SSF48452 BPTD_RS08930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 BPTD_RS08935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005134|IPR020761|IPR020765 Uncharacterised protein family UPF0114|Uncharacterised protein family UPF0114, bacteria|Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 MF_00143|PF03350|PTHR38596|PTHR38596:SF1|TIGR00645 BPTD_RS08940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001179|IPR005215|IPR008880|IPR008881|IPR027304 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|PTHR30560|PTHR30560:SF3|SSF102735|SSF109998|SSF54534|TIGR00115 BPTD_RS08945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001907|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00382|PTHR10381|PTHR10381:SF22|SSF52096|TIGR00493 BPTD_RS08950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|PTHR11262|PTHR11262:SF4|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 BPTD_RS08955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|PTHR10046|PTHR10046:SF43|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 BPTD_RS08960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF0|SSF46785|SSF53850 BPTD_RS08965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS08970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS08975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PTHR13078|SSF54637 BPTD_RS08980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096 BPTD_RS08985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|PTHR34075|PTHR34075:SF2|SSF50249 BPTD_RS08990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF02803|PIRSF000429|PTHR18919|PTHR18919:SF108|SSF53901 BPTD_RS08995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 BPTD_RS09000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:2.40.110.10|PF02770|PF02771|PS00072|PTHR10909|PTHR10909:SF242|SSF56645 BPTD_RS09010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004165|IPR012792 3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF01144|PTHR13707|SM00882|SSF100950|TIGR02429 BPTD_RS09015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004164|IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase active site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|PS01274|PTHR13707|SM00882|SSF100950|TIGR02428 BPTD_RS09020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PTHR30349|PTHR30349:SF16 BPTD_RS09025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401 BPTD_RS09030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR005546|IPR006315 Autotransporter beta-domain|Outer membrane autotransporter barrel|Pertactin virulence factor family GO:0007155|GO:0019867 G3DSA:2.40.128.130|PF03797|PR01484|PTHR12338|SM00869|SSF103515|TIGR01414 BPTD_RS09045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006197|IPR006199|IPR006200|IPR011991|IPR015927|IPR019759|IPR028360 LexA repressor, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004252|GO:0006355|GO:0006508|GO:0009432|GO:0045892 G3DSA:1.10.10.10|G3DSA:2.10.109.10|MF_00015|PF00717|PF01726|PR00726|PTHR33516|PTHR33516:SF2|SSF46785|SSF51306|TIGR00498 BPTD_RS09050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000796|IPR004838|IPR004839|IPR015421|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Aspartate/other aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0006520|GO:0008483|GO:0009058|GO:0030170 G3DSA:3.40.640.10|PF00155|PR00799|PS00105|PTHR11879|PTHR11879:SF11|SSF53383 BPTD_RS09055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|PTHR24029|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 BPTD_RS09060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017867|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 G3DSA:3.40.50.270|PF01451|PR00719|PTHR11717|PTHR11717:SF7|SM00226|SSF52788 BPTD_RS09065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000944|IPR010242|IPR011991 Transcription factor HTH, IscR|Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain GO:0003690|GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF1|SSF46785|TIGR00738|TIGR02010 BPTD_RS09070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000192|IPR010240|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase IscS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170|GO:0031071|GO:0044571 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00331|PF00266|PIRSF005572|PS00595|PTHR11601|PTHR11601:SF45|SSF53383|TIGR02006 BPTD_RS09075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002871|IPR011339 ISC system FeS cluster assembly, IscU scaffold|NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|PTHR10093|PTHR10093:SF3|SSF82649|TIGR01999 BPTD_RS09080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000361|IPR011302|IPR016092|IPR017870|IPR031108 FeS assembly protein IscA-like|FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site|Iron-binding protein IscA, proteobacteria GO:0005198|GO:0005506|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PS01152|PTHR10072|PTHR10072:SF48|SSF89360|TIGR00049|TIGR02011 BPTD_RS09085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001623|IPR004640|IPR009073 Co-chaperone Hsc20|Co-chaperone HscB, C-terminal oligomerisation domain|DnaJ domain GO:0006457|GO:0051087|GO:0051259 G3DSA:1.10.287.110|G3DSA:1.20.1280.20|MF_00682|PF07743|PTHR14021|PTHR14021:SF15|SM00271|SSF46565|SSF47144|TIGR00714 BPTD_RS09090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010236|IPR013126|IPR018181|IPR029047|IPR029048 Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain|ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00679|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF176|SSF100920|SSF100934|SSF53067|TIGR01991 BPTD_RS09095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR001055|IPR011536|IPR012675|IPR018298 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Adrenodoxin, iron-sulphur binding site|Beta-grasp domain|Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|PS00814|PTHR23426|SSF54292|TIGR02007 BPTD_RS09100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 G3DSA:1.10.10.600|PF04384|PIRSF039003|PTHR37532|PTHR37532:SF1|SSF140319|TIGR03412 BPTD_RS09105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011607|IPR018148 Methylglyoxal synthase, active site|Methylglyoxal synthase-like domain GO:0008929|GO:0019242 G3DSA:3.40.50.1380|PS01335|PTHR30492|SSF52335 BPTD_RS09110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|PTHR11941:SF76|SSF52096 BPTD_RS09120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 PD024513|PF03812 BPTD_RS09135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010737|IPR031475 Putative nucleotide-binding C-terminal domain|Putative sugar-binding, N-terminal domain PF07005|PF17042|SSF142764 BPTD_RS09140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF04166|PTHR30004|PTHR30004:SF6|SSF53659 BPTD_RS09145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PTHR11751|PTHR11751:SF333|SM00345|SM00866|SSF46785|SSF64288 BPTD_RS09150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005302|IPR005303|IPR011037 MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 PF03473|PF03476|PTHR14237|PTHR14237:SF30|SSF141673|SSF50800 BPTD_RS09155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PIRSF006246|PTHR21012|PTHR21012:SF0|SSF50692|TIGR00223 BPTD_RS09160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR001221|IPR001433|IPR001709|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PS00197|PTHR19370|PTHR19370:SF68|SSF52343|SSF54292|SSF63380 BPTD_RS09165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR016040|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.40.50.720|PF01266|PTHR13847|PTHR13847:SF148|SSF51905|SSF54373 BPTD_RS09170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.190.10|PF13416|PTHR30061|PTHR30061:SF7|SSF53850 BPTD_RS09175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|PTHR30419:SF3|SSF46785|SSF53850 BPTD_RS09190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PTHR13943|PTHR13943:SF48 BPTD_RS09195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF21|SSF53850 BPTD_RS09200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS09205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF54|SSF161098 BPTD_RS09210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF132|SM00382|SSF52540 BPTD_RS09215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site GO:0016884 G3DSA:3.90.1300.10|PF01425|PS00571|PTHR11895|SSF75304 BPTD_RS09230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009663 Pilin accessory predicted PF06864 BPTD_RS09240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PTHR30258|PTHR30258:SF2|SSF52540 BPTD_RS09250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012902|IPR014911 Prokaryotic N-terminal methylation site|Type 4 secretion system, PilS, N-terminal G3DSA:3.30.700.10|PF08805|PS00409|SSF54523|TIGR02532 BPTD_RS09260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|PTHR11777|PTHR11777:SF9|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 BPTD_RS09265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|PF01206|PS01148|PTHR33279|SSF64307 BPTD_RS09275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000307|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PTHR12919|SSF54565|TIGR00002 BPTD_RS09280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002676|IPR009000|IPR011033|IPR011961 16S rRNA processing protein RimM|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PTHR33692|SSF50346|SSF50447|TIGR02273 BPTD_RS09285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|PTHR32125|PTHR32125:SF1|SSF75217|TIGR00088 BPTD_RS09290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PS00595|PTHR11601|PTHR11601:SF42|SSF53383 BPTD_RS09295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF14588|PTHR11803|PTHR11803:SF2|SSF55298 BPTD_RS09300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017703 YgfZ/GcvT conserved site G3DSA:3.30.70.1400|PTHR22602|PTHR22602:SF0|SSF103025|TIGR03317 BPTD_RS09310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003770|IPR013087 Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 G3DSA:3.30.160.60|PF02618|PTHR30518|PTHR30518:SF2|TIGR00247 BPTD_RS09315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018094|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PTHR10344|SSF52540|TIGR00041 BPTD_RS09320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004622|IPR027417 DNA polymerase III, delta prime subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003887|GO:0006260|GO:0008408 G3DSA:3.40.50.300|PF13177|PTHR11669|PTHR11669:SF8|SSF52540|TIGR00678 BPTD_RS09325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised deoxyribonuclease TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01091|PS01137|PTHR10060|PTHR10060:SF20|SSF51556|TIGR00010 BPTD_RS09330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24198|SM00248|SSF48403 BPTD_RS09335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF14|SM00346|SSF46785|SSF55781 BPTD_RS09340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001320|IPR001638|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0004970|GO:0005215|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|SM00062|SM00079|SSF53850 BPTD_RS09350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF447|SM00382|SSF52540 BPTD_RS09355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023696 Ureohydrolase domain G3DSA:3.40.800.10 BPTD_RS09360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|PTHR11606|SM00839|SSF51735|SSF53223 BPTD_RS09365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF210|SSF53720 BPTD_RS09370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002933|IPR010158|IPR011650 Amidase, hydantoinase/carbamoylase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF001235|PTHR32494|PTHR32494:SF6|SSF53187|SSF55031|TIGR01879 BPTD_RS09375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF120|SSF52467|SSF52518 BPTD_RS09380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|PTHR32308|SSF51621 BPTD_RS09385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF2|TIGR00786 BPTD_RS09390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011|PTHR35011:SF2 BPTD_RS09395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|PTHR33376|PTHR33376:SF4|TIGR00787 BPTD_RS09400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF389|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS09405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007438 Protein of unknown function DUF488 PF04343|PTHR36849|PTHR36849:SF1 BPTD_RS09415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR24559|SSF53098 BPTD_RS09430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|PTHR11895:SF73|SSF75304 BPTD_RS09435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009906|IPR016938 Protein of unknown function DUF1445|Uncharacterised protein family UPF0317 G3DSA:3.40.1640.10|MF_01830|PF07286|PIRSF029755|PTHR32022|SSF160920 BPTD_RS09440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|SM00052|SSF141868 BPTD_RS09445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000014|IPR001638|IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain|Solute-binding protein family 3/N-terminal domain of MltF GO:0000155|GO:0000160|GO:0004871|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.190.10|G3DSA:3.40.50.2300|PF00072|PF00497|PF00512|PF00989|PF01627|PF02518|PR00344|PTHR24423|PTHR24423:SF382|SM00062|SM00073|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF53850|SSF55785|SSF55874|TIGR00229 BPTD_RS09450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000792|IPR001789|IPR011006|IPR011991 CheY-like superfamily|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF52172 BPTD_RS09455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008619|IPR008638|IPR011050|IPR012334|IPR024973|IPR025157 ESPR domain|Filamentous haemagglutinin repeat|Filamentous haemagglutinin, N-terminal|Haemagluttinin repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05594|PF05860|PF13018|PF13332|PR01217|PTHR32093|SM00912|SSF51126|TIGR01901 BPTD_RS09460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000259|IPR008966 Adhesion domain|Fimbrial-type adhesion domain GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF16970|SSF49401 BPTD_RS09465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001829|IPR008962|IPR016147|IPR016148|IPR018046 PapD-like|Pili assembly chaperone, C-terminal|Pili assembly chaperone, N-terminal|Pili assembly chaperone, bacterial|Pili assembly chaperone, conserved site GO:0030288|GO:0043711|GO:0061077|GO:0071555 G3DSA:2.60.40.1070|G3DSA:2.60.40.360|PF00345|PF02753|PR00969|PS00635|PTHR30251|PTHR30251:SF2|SSF49354|SSF49584 BPTD_RS09470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000015|IPR018030|IPR025885|IPR025949 Fimbrial membrane usher, conserved site|Outer membrane usher protein|PapC, N-terminal domain|PapC-like, C-terminal domain GO:0005215|GO:0005515|GO:0006810|GO:0016020 PF00577|PF13953|PF13954|PS01151|PTHR30451|SSF141729 BPTD_RS09475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000259|IPR008966 Adhesion domain|Fimbrial-type adhesion domain GO:0007155|GO:0009289 G3DSA:2.60.40.1090|SSF49401 BPTD_RS09480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005565|IPR013686|IPR027282 Haemolysin activator HlyB|Polypeptide-transport-associated, ShlB-type|Two partner secretion pathway transporter GO:0015031 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF03865|PF08479|PIRSF029745|PTHR34597 BPTD_RS09490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BPTD_RS09495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PTHR33376|SSF53850 BPTD_RS09505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BPTD_RS09510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PTHR33376|SSF53850 BPTD_RS09520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF10|SSF46785|SSF53850 BPTD_RS09525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991|IPR014601 MarR-type HTH domain|Transcriptional regulator with MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13463|PIRSF036158|SSF46785 BPTD_RS09530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002821|IPR003692|IPR008040 Hydantoinase B/oxoprolinase|Hydantoinase/oxoprolinase|Hydantoinaseoxoprolinase, N-terminal GO:0003824|GO:0016787 PF01968|PF02538|PF05378|PTHR11365|PTHR11365:SF2 BPTD_RS09535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005079 Peptidase C45 PF03417|PTHR34180 BPTD_RS09545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PTHR30221|PTHR30221:SF7|SSF50182|SSF82689|SSF82861 BPTD_RS09550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS09555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS09560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001537|IPR004384|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase TrmH, group 1|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|PIRSF004808|PTHR12029|SSF75217 BPTD_RS09565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|PTHR20854|PTHR20854:SF4|SSF56655 BPTD_RS09570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000644|IPR005170|IPR005496|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Integral membrane protein TerC|Transporter-associated domain GO:0003824|GO:0016021|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PF03741|PTHR22777|PTHR22777:SF15|SM01091|SSF54631|SSF56176 BPTD_RS09575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|PTHR30622|PTHR30622:SF3 BPTD_RS09580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004843|IPR010138|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462|GO:0016787 G3DSA:3.60.21.10|MF_00575|PF00149|PTHR34990|PTHR34990:SF1|SSF56300|TIGR01854 BPTD_RS09585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|PTHR11071|PTHR11071:SF192|SSF50891 BPTD_RS09590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|SM00028|SSF48452 BPTD_RS09595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|PTHR10890|SM00840|SSF47323|SSF52374|TIGR00435 BPTD_RS09600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003265|IPR011257|IPR023170 DNA glycosylase|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00730|PTHR10242|PTHR10242:SF0|SM00478|SSF48150 BPTD_RS09605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|PTHR22855|PTHR22855:SF42|SSF52096|TIGR00513 BPTD_RS09610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011063|IPR012094|IPR012795|IPR014729|IPR015262 Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase , substrate-binding domain|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|PF09179|PTHR11807|PTHR11807:SF2|SSF52402|SSF82829|TIGR02432 BPTD_RS09620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001048|IPR001057|IPR001341|IPR002912|IPR005260|IPR018042|IPR027795 ACT domain|Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase|GATS-like ACT domain|Glutamate/acetylglutamate kinase GO:0004072|GO:0006561|GO:0008152|GO:0008652|GO:0009089|GO:0016597 G3DSA:3.40.1160.10|PF00696|PF01842|PF13840|PIRSF000726|PR00474|PS00324|PTHR21499|PTHR21499:SF27|SSF53633|SSF55021|TIGR00656|TIGR00657 BPTD_RS09630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS09635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BPTD_RS09640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011008|IPR012577 Dimeric alpha-beta barrel|NIPSNAP G3DSA:3.30.70.900|PF07978|PTHR21017|SSF54909 BPTD_RS09645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006108|IPR006176|IPR006180|IPR008927|IPR013328|IPR016040 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PS00067|PTHR23309|PTHR23309:SF17|SSF48179|SSF51735 BPTD_RS09650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011|PTHR35011:SF2 BPTD_RS09655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF2|TIGR00786 BPTD_RS09660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|PTHR33376 BPTD_RS09665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|SSF53474 BPTD_RS09670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002811|IPR005106|IPR011182|IPR016040|IPR020626 Aspartate dehydrogenase|Aspartate/homoserine dehydrogenase, NAD-binding|L-aspartate dehydrogenase|L-aspartate dehydrogenase, prokaryotic|NAD(P)-binding domain GO:0006742|GO:0009435|GO:0016491|GO:0019363|GO:0033735|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01265|PF01958|PF03447|PIRSF005227|PTHR31873|SSF51735|SSF55347 BPTD_RS09675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24321|PTHR24321:SF6|SSF51735 BPTD_RS09680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|SSF46689|SSF48498 BPTD_RS09685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30427|SSF46785|SSF53850 BPTD_RS09690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.190.10|PF13416|PTHR30222|PTHR30222:SF2|SSF53850 BPTD_RS09695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|PTHR22642|PTHR22642:SF2|SSF51338|SSF51556 BPTD_RS09700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011059|IPR013108 Amidohydrolase 3|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|PF07969|PTHR22642|PTHR22642:SF2|SSF51338 BPTD_RS09705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF8|SSF161098 BPTD_RS09710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF20|SSF161098 BPTD_RS09715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF402|SM00382|SSF50331|SSF52540 BPTD_RS09725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PTHR22893|SSF51395 BPTD_RS09730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF10|SM00346|SSF46785|SSF55781 BPTD_RS09735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003781|IPR013816|IPR016040|IPR016102|IPR032875 ATP-grasp fold, subdomain 2|CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0005524|GO:0048037 G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|PTHR33303|PTHR33303:SF3|SM00881|SSF51735|SSF52210|SSF56059 BPTD_RS09740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS09745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|SSF55298 BPTD_RS09750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BPTD_RS09755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BPTD_RS09760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|SSF54637 BPTD_RS09765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PTHR33154|SM00418|SSF46785 BPTD_RS09770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PTHR22893|PTHR22893:SF14|SSF51395 BPTD_RS09780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023853|IPR029044 Nucleotide-diphospho-sugar transferases|Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 G3DSA:3.90.550.10|PF13641|PTHR10859|PTHR10859:SF92|SSF53448|TIGR03937 BPTD_RS09785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002509|IPR011330|IPR023854|IPR032772 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB|Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal GO:0003824|GO:0005975|GO:0016810|GO:0042710 G3DSA:3.20.20.370|PF01522|PF14883|PTHR34216|PTHR34216:SF2|SSF88713|TIGR03938 BPTD_RS09790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990|IPR019734|IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0022891|GO:0042710 G3DSA:1.25.40.10|PF13432|PF14559|PTHR23083|SM00028|SSF48452|SSF56935|TIGR03939 BPTD_RS09805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13463|PR00598|PTHR33164|PTHR33164:SF8|SM00347|SSF46785 BPTD_RS09810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF15|SSF53822 BPTD_RS09820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF381 BPTD_RS09825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS09830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF469|SM00382|SSF52540 BPTD_RS09835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000674|IPR008274|IPR009056 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Cytochrome c-like domain GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|G3DSA:3.30.365.10|PF02738|PTHR35008|PTHR35008:SF2|SM01008|SSF46626|SSF54665|SSF56003 BPTD_RS09840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|SSF47741|SSF54292 BPTD_RS09845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF186|SSF51905|SSF54373 BPTD_RS09850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR026286|IPR028615 Maleate isomerase|Maleate isomerase/Arylmalonate decarboxylase GO:0050076 MF_00943|PIRSF015736|PTHR40267 BPTD_RS09855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PTHR10992|SSF53474 BPTD_RS09860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF144052 BPTD_RS09865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF38|SSF52499 BPTD_RS09870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS09880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000951|IPR013112|IPR013130|IPR017938 FAD-binding 8|Ferric reductase transmembrane component-like domain|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF01794|PF08022|PR00409|PTHR11972|PTHR11972:SF23|SSF52343|SSF63380 BPTD_RS09885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF17|SSF56935|TIGR01783 BPTD_RS09895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS09905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS09910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000792|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00196|PR00038|PTHR26402|PTHR26402:SF598|SM00421|SSF46894|SSF52172 BPTD_RS09915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PTHR22573|PTHR22573:SF28|SSF53738|SSF55957 BPTD_RS09920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 G3DSA:3.40.50.10490|PF00342|PR00662|PTHR11469|PTHR11469:SF1|SSF53697 BPTD_RS09925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PTHR23416|PTHR23416:SF65|SSF51161 BPTD_RS09930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF115|SSF103473 BPTD_RS09935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003000|IPR026587|IPR026591|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family|Sirtuin family, catalytic core small domain|Sirtuin, class II GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|MF_01967|PF02146|PTHR11085|PTHR11085:SF22|SSF52467 BPTD_RS09940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000760 Inositol monophosphatase GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PTHR20854|PTHR20854:SF4|SSF56655 BPTD_RS09945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010102|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Succinate semialdehyde dehydrogenase GO:0008152|GO:0009013|GO:0009450|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF49|SSF53720|TIGR01780 BPTD_RS09950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004632|IPR005814|IPR015421|IPR015422|IPR015424 4-aminobutyrate aminotransferase, bacterial|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0003867|GO:0008483|GO:0009448|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF70|SSF53383|TIGR00700 BPTD_RS09955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PR00035|PTHR11751|PTHR11751:SF10|SM00345|SSF46785|SSF53383 BPTD_RS09960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002763 Protein of unknown function DUF72 G3DSA:3.20.20.410|PF01904|PTHR30348|PTHR30348:SF4|SSF117396 BPTD_RS09965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000212|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF3|SSF52540 BPTD_RS09970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|PF01544|PTHR21535|SSF143865|SSF144083 BPTD_RS09975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002071|IPR016071 Staphylococcal nuclease (SNase-like), OB-fold|Thermonuclease active site GO:0003676|GO:0004518 G3DSA:2.40.50.90|PF00565|PS01123|PTHR12302|SM00318|SSF50199 BPTD_RS09980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914 Solute-binding protein family 5 domain G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PTHR30290|SSF53850 BPTD_RS09985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF24|SSF161098 BPTD_RS09990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF2|SSF161098 BPTD_RS09995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF574|SM00382|SSF52540 BPTD_RS10000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PTHR33164|PTHR33164:SF12|SM00347|SSF46785 BPTD_RS10010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013686 Polypeptide-transport-associated, ShlB-type G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF08479|PTHR34597|PTHR34597:SF1 BPTD_RS10015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005330 MHYT domain PF03707|PTHR35152 BPTD_RS10020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007047 Flp/Fap pilin component PF04964 BPTD_RS10025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478 BPTD_RS10030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012495 TadE-like PF07811 BPTD_RS10035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012495 TadE-like PF07811 BPTD_RS10040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013974|IPR017592|IPR031571 Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain PF08666|PF16976|SM00858|TIGR03177 BPTD_RS10045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001775|IPR004846|IPR032789 GspD/PilQ family|Pilus formation protein, N-terminal|Type II/III secretion system GO:0009306 PF00263|PF13629|PR00811|PTHR30332|PTHR30332:SF1 BPTD_RS10050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011006|IPR027417 CheY-like superfamily|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.2300|G3DSA:3.40.50.300|SSF52172|SSF52540 BPTD_RS10055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PTHR30258|PTHR30258:SF3|SSF52540 BPTD_RS10060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF1 BPTD_RS10065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF2 BPTD_RS10070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990|IPR016931|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Uncharacterised conserved protein UCP029658, TPR GO:0005515 G3DSA:1.25.40.10|PF13432|PIRSF029658|PTHR23083|SM00028|SSF48452 BPTD_RS10080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018705 Domain of unknown function DUF2134, membrane PF09977 BPTD_RS10085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SSF46689|SSF52540 BPTD_RS10090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021350 Protein of unknown function DUF2968 PF11180 BPTD_RS10095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009562 Protein of unknown function DUF1178 PF06676|PIRSF032131 BPTD_RS10100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF24|SSF88659|SSF88946|TIGR02937 BPTD_RS10105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF13668|SSF47240 BPTD_RS10110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002327|IPR009056 Cytochrome c, class IA/ IB|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00604|PTHR11961|SSF46626 BPTD_RS10115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 BPTD_RS10120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016633 Uncharacterised conserved protein UCP015557 PF10093|PIRSF015557|TIGR03837 BPTD_RS10125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021292 Protein of unknown function DUF2863 PF11062 BPTD_RS10130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004183|IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type|Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0008270|GO:0016491|GO:0016701|GO:0055114 G3DSA:3.40.830.10|PF02900|PIRSF006157|PTHR30096|PTHR30096:SF0|SSF53213 BPTD_RS10135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR015932|IPR015937|IPR018136 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron-responsive element-binding protein 2|Aconitase/isopropylmalate dehydratase GO:0008152 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF1|SSF52016|SSF53732|TIGR01341 BPTD_RS10140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023346 Lysozyme-like domain G3DSA:1.10.530.10|SSF53955 BPTD_RS10145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR010917|IPR012910|IPR030149 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor|TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0006810|GO:0009279|GO:0015891|GO:0016020|GO:0016021 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|PTHR32552|PTHR32552:SF14|SSF56935|TIGR01783 BPTD_RS10150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006328|IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Haloacid dehalogenase, type II GO:0008152|GO:0016787|GO:0019120 G3DSA:3.40.50.1000|PF13419|PR00413|PTHR12725|PTHR12725:SF66|SSF56784|TIGR01428|TIGR01493 BPTD_RS10155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|SSF103088 BPTD_RS10170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001030|IPR004406|IPR015928|IPR015929|IPR015931|IPR015932|IPR015933|IPR015937|IPR018136 Aconitase B|Aconitase B, HEAT-like domain|Aconitase B, N-terminal|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003994|GO:0005829|GO:0006099|GO:0008152|GO:0051539 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF06434|PF11791|PIRSF036687|PS00450|PS01244|PTHR11670|PTHR11670:SF39|SSF52016|SSF53732|SSF74778|TIGR00117 BPTD_RS10175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012337|IPR013520 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF00929|PTHR30231|SM00479|SSF53098 BPTD_RS10180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011394|IPR025984 MazG-like domain|NTP Pyrophosphohydrolase MazG-related, RS21-C6 G3DSA:1.10.287.1080|PF12643|PIRSF029826|PTHR14552|SSF101386 BPTD_RS10185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BPTD_RS10190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|PTHR33606|PTHR33606:SF3|SSF54909 BPTD_RS10195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR32322|PTHR32322:SF9|SSF103481 BPTD_RS10200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BPTD_RS10210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|PTHR30419:SF8|SSF46785|SSF53850 BPTD_RS10220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003702|IPR017821|IPR026888 Acetyl-CoA hydrolase/transferase|Acetyl-CoA hydrolase/transferase C-terminal domain|Succinate CoA transferase GO:0003824|GO:0006084|GO:0016740 G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF02550|PF13336|PTHR21432|PTHR21432:SF10|SSF100950|TIGR03458 BPTD_RS10230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|SSF46785|SSF53850 BPTD_RS10265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023006|IPR032710 NTF2-like domain|Uncharacterised protein family UPF0225 G3DSA:3.10.450.50|MF_00612|SSF54427 BPTD_RS10270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016181|IPR031165 Acyl-CoA N-acyltransferase|Yjdj-type Gcn5-related N-acetyltransferase G3DSA:3.40.630.30|PF14542|PTHR31435|PTHR31435:SF3|SSF55729 BPTD_RS10275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006108|IPR006176|IPR008927|IPR016040 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF00725|PF02737|PTHR23309|PTHR23309:SF17|SSF48179|SSF51735 BPTD_RS10280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site GO:0016884 G3DSA:3.90.1300.10|PF01425|PS00571|PTHR11895|PTHR11895:SF84|SSF75304 BPTD_RS10290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|PTHR11063|PTHR11063:SF8|SSF53720|TIGR00407 BPTD_RS10295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005790|IPR008921|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.20|G3DSA:3.40.50.300|PF06144|PTHR34388|SSF48019|SSF52540|TIGR01128 BPTD_RS10300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 G3DSA:3.30.160.150|MF_01186|PF04390 BPTD_RS10305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR015413|IPR025709 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF09334|PF13603|PR00985|PS00178|PTHR11946|PTHR11946:SF7|SSF47323|SSF50677|SSF52374|TIGR00396 BPTD_RS10310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF79|SSF103473 BPTD_RS10315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|PTHR33164:SF4|SM00347|SSF46785 BPTD_RS10320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PTHR33175|PTHR33175:SF1|SM00411|SSF47729 BPTD_RS10325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PTHR11814|PTHR11814:SF71|SSF52091 BPTD_RS10335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001705|IPR011332 Ribosomal protein L33|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PTHR15238|SSF57829|TIGR01023 BPTD_RS10340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|PTHR13528|SSF143800|TIGR00009 BPTD_RS10345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004812|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23502|PTHR23502:SF19|SSF103473|TIGR00710 BPTD_RS10350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003333|IPR029063 Mycolic acid cyclopropane synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008610 G3DSA:3.40.50.150|PF02353|PIRSF003085|PTHR10108|PTHR10108:SF743|SSF53335 BPTD_RS10355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 G3DSA:3.40.190.10|G3DSA:3.40.190.100|PF04069|PTHR30177|PTHR30177:SF14|SSF53850 BPTD_RS10365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30177|PTHR30177:SF10|SSF161098 BPTD_RS10370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR005892|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Glycine betaine transport ATP-binding subunit|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887|GO:0031460 G3DSA:3.10.580.10|G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF374|SM00382|SSF52540|SSF54631|TIGR01186 BPTD_RS10375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.20|PF01361|PTHR38460|PTHR38460:SF1|SSF55331 BPTD_RS10380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020610|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PTHR18919|PTHR18919:SF95|SSF53901|TIGR01930 BPTD_RS10385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BPTD_RS10390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF362|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS10395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 PF05292|PTHR28641|PTHR28641:SF1 BPTD_RS10400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096 BPTD_RS10410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS10415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001424|IPR018152|IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone|Superoxide dismutase, copper/zinc binding domain|Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:2.60.40.200|PF00080|PS00087|PS00332|PTHR10003|PTHR10003:SF40|SSF49329 BPTD_RS10420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007487|IPR028082 ABC transporter, substrate-binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF04392|PTHR35271|SSF53822 BPTD_RS10430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF534|SM00382|SSF52540 BPTD_RS10435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR003725|IPR004606|IPR005116|IPR008995|IPR011991|IPR016462 Molybdate-dependent transcriptional regulator ModE|Molybdate/tungstate binding, C-terminal|Molybdenum-binding protein ModE, N-terminal|Molybdenum-pterin binding|Transcription regulator HTH, LysR|Transport-associated OB, type 1|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0006810|GO:0015689|GO:0030151 G3DSA:1.10.10.10|G3DSA:2.40.50.100|PF00126|PF03459|PIRSF005763|PTHR30432|SSF46785|SSF50331|TIGR00637|TIGR00638 BPTD_RS10440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025411 Domain of unknown function DUF4136 PF13590 BPTD_RS10445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001227|IPR002641|IPR016035|IPR021095 Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Protein of unknown function DUF3734 GO:0006629|GO:0008152|GO:0016740 G3DSA:3.40.366.10|PF01734|PF12536|PTHR14226|PTHR14226:SF31|SSF52151 BPTD_RS10450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001867|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00486|SM00862|SSF46894 BPTD_RS10455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30158|PTHR30158:SF3|SSF111369|TIGR01730 BPTD_RS10460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF10|SSF82693|SSF82714|SSF82866|TIGR00915 BPTD_RS10465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF15|SSF56954 BPTD_RS10470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004569|IPR013785 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|PTHR30456|PTHR30456:SF0|SSF63892|TIGR00559 BPTD_RS10475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002582|IPR004568|IPR008278 4'-phosphopantetheinyl transferase superfamily|Holo-[acyl carrier protein] synthase|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556 BPTD_RS10480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001764|IPR017853|IPR019800|IPR022956 Beta-hexosaminidase, bacterial|Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal|Glycoside hydrolase, family 3, active site GO:0004553|GO:0004563|GO:0005975 G3DSA:3.20.20.300|MF_00364|PF00933|PS00775|PTHR30480|PTHR30480:SF7|SSF51445 BPTD_RS10485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000305|IPR001162|IPR001943|IPR003583|IPR004791|IPR010994|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily|Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0003677|GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|PF14520|PTHR30562|PTHR30562:SF1|SM00278|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 BPTD_RS10490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|PTHR14269|PTHR14269:SF13|TIGR00560 BPTD_RS10495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23505|PTHR23505:SF8|SSF103473 BPTD_RS10500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|SSF103473 BPTD_RS10505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016428|IPR029139|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00817|PF14489|PF14819|PIRSF004750|PTHR34354|PTHR34354:SF1|SSF55620|TIGR03138 BPTD_RS10510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006254|IPR015813|IPR018523 Isocitrate lyase|Isocitrate lyase/phosphorylmutase, conserved site|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0004451|GO:0008152|GO:0019752 G3DSA:3.20.20.60|PF00463|PIRSF001362|PS00161|PTHR21631|SSF51621|TIGR01346 BPTD_RS10520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF10 BPTD_RS10530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF398 BPTD_RS10535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF18|SSF53822 BPTD_RS10540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001663|IPR015879|IPR015881|IPR017941 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016705|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|PS00570|PTHR21266|PTHR21266:SF30|SSF50022|SSF55961 BPTD_RS10545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|PTHR41534|SSF54427 BPTD_RS10550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096 BPTD_RS10555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 BPTD_RS10560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR001055|IPR012675|IPR018298 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Adrenodoxin, iron-sulphur binding site|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|PS00814|PTHR23426|SSF54292 BPTD_RS10565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF591|SSF89796 BPTD_RS10570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|SSF53474 BPTD_RS10575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR028154 AMP-dependent ligase, C-terminal|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF14535|PTHR36932|PTHR36932:SF1|SSF56801 BPTD_RS10580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PTHR18919|PTHR18919:SF8|SSF53901 BPTD_RS10585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002878|IPR012340|IPR013747|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Domain of unknown function DUF35, OB-fold, C-terminal|Nucleic acid-binding, OB-fold|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF01796|PF08541|PTHR34069|SSF50249|SSF53901 BPTD_RS10590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016195|IPR022028 Polymerase/histidinol phosphatase-like|Protein of unknown function DUF3604 GO:0003824 PF12228|SSF89550 BPTD_RS10595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|SSF46785|SSF53850 BPTD_RS10600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS10605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011893|IPR012336 Selenoprotein, Rdx type|Thioredoxin-like fold G3DSA:3.40.30.10|PF10262|PTHR36417|PTHR36417:SF2|SSF52833|TIGR02174 BPTD_RS10620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001486|IPR009050|IPR012292 Globin-like|Globin/Protoglobin|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|SSF46458 BPTD_RS10625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010266 NnrS PF05940 BPTD_RS10630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007418 Protein of unknown function DUF474 PIRSF015875 BPTD_RS10635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004808|IPR005135|IPR020848 AP endonuclease 1|AP endonuclease 1, conserved site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00728|PTHR22748|PTHR22748:SF7|SSF56219|TIGR00195|TIGR00633 BPTD_RS10640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009197|IPR010799|IPR015995 Microcystin LR degradation protein MlrC|Microcystin LR degradation protein MlrC, C-terminal|Microcystin LR degradation protein MlrC, N-terminal PF07171|PF07364|PIRSF012702 BPTD_RS10650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SM00822|SSF51735 BPTD_RS10655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|PTHR11895:SF35|SSF75304 BPTD_RS10660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|PTHR11895:SF35|SSF75304 BPTD_RS10665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|SSF53474 BPTD_RS10670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR10587|PTHR10587:SF74|SSF88713 BPTD_RS10675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS10685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004099|IPR012999|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF106|SSF51905|SSF55424 BPTD_RS10700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS10705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PTHR30086|PTHR30086:SF7 BPTD_RS10715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PTHR30212|PTHR30212:SF3|SSF50475 BPTD_RS10720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF24|SSF46785|SSF53850 BPTD_RS10725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021719 Proteinase inhibitor I78 PF11720|PTHR39600 BPTD_RS10730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF66|SSF47741|SSF54292 BPTD_RS10735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|PTHR11908|PTHR11908:SF79|SM01008|SSF56003 BPTD_RS10740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003777|IPR016185|IPR027051 Pre-ATP-grasp domain|XdhC Rossmann domain|XdhC- CoxI G3DSA:3.40.50.20|PF02625|PF13478|PTHR30388|PTHR30388:SF4 BPTD_RS10745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009057|IPR009594|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC, N-terminal GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF06719|PF12833|PTHR11019|PTHR11019:SF81|SM00342|SSF46689 BPTD_RS10755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003111|IPR015947 ATP-dependent protease La (LON), substrate-binding domain|PUA-like domain GO:0004176|GO:0006508 PF02190|PTHR23327|PTHR23327:SF0|SM00464|SSF88697 BPTD_RS10760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028973|IPR029068 3-demethylubiquinone-9 3-methyltransferase|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF06983|PTHR33990|PTHR33990:SF1|SSF54593 BPTD_RS10765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF76|SSF103473|TIGR00711 BPTD_RS10770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|PTHR28620|PTHR28620:SF2|SSF51316 BPTD_RS10775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|PTHR23091:SF259|SSF55729 BPTD_RS10785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF138|SM00382|SSF52540|SSF90123 BPTD_RS10800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535|PTHR11040|PTHR11040:SF33 BPTD_RS10810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS10815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PTHR11814|PTHR11814:SF112|SSF52091 BPTD_RS10820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BPTD_RS10825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|SM00418|SSF46785 BPTD_RS10830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PTHR10992|PTHR10992:SF854|SSF53474 BPTD_RS10835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005180 Domain of unknown function DUF302 G3DSA:3.30.310.70|PF03625|SSF103247 BPTD_RS10840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021553 Protein of unknwon function DUF3008 PF11450 BPTD_RS10845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|PTHR11019|PTHR11019:SF68|SM00342|SSF46689|SSF52317 BPTD_RS10850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009874|IPR011008 Dimeric alpha-beta barrel|Protein of unknown function DUF1428 G3DSA:3.30.70.900|PF07237|PIRSF007028|SSF54909 BPTD_RS10855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|PTHR13774|PTHR13774:SF21|SSF54506|TIGR00654 BPTD_RS10860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 BPTD_RS10865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007383|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|Protein of unknown function DUF445 GO:0005488 G3DSA:1.25.10.10|PF04286|PTHR38442|SSF48371 BPTD_RS10875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|PTHR10204|PTHR10204:SF5|SSF52218 BPTD_RS10880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF97|SSF53720 BPTD_RS10885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1 GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF01590|PF02954|PS00675|PTHR32071|SM00382|SSF46689|SSF52540 BPTD_RS10890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007300 CidB/LrgB family PF04172|PTHR30249|PTHR30249:SF5 BPTD_RS10900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005538 LrgA/CidA family GO:0016021 PF03788|PTHR33931 BPTD_RS10905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004472|IPR027417|IPR029063 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase|S-adenosyl-L-methionine-dependent methyltransferase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.150|G3DSA:3.40.50.300|MF_00336|PF13500|PF13649|PTHR21343|PTHR21343:SF11|SSF52540|SSF53335|TIGR00347 BPTD_RS10910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BPTD_RS10915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001917|IPR004723|IPR004839|IPR015421|IPR015422|IPR015424 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type|Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008152|GO:0008710|GO:0009058|GO:0009102|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|PTHR13693|PTHR13693:SF53|SSF53383|TIGR00858 BPTD_RS10920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF8|SSF53383|TIGR00508 BPTD_RS10925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS10930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PF00122 BPTD_RS10935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004714 Cytochrome oxidase maturation protein cbb3-type PF03597|TIGR00847 BPTD_RS10945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000883|IPR003468|IPR009056 Cytochrome c oxidase subunit I|Cytochrome c oxidase, monohaem subunit/FixO|Cytochrome c-like domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF02433|PTHR10422|PTHR10422:SF23|SSF46626|TIGR00781 BPTD_RS10955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004678|IPR009056|IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal|Cytochrome c oxidase cbb3-type, subunit III|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PF14715|PIRSF000006|PTHR33751|PTHR33751:SF1|SSF46626|TIGR00782 BPTD_RS10960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013783|IPR014116|IPR017896|IPR017900|IPR032879 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cytochrome c oxidase cbb3 type, accessory protein FixG|FixG, C-terminal immunoglobulin-like domain|Immunoglobulin-like fold GO:0016021 G3DSA:2.60.40.10|G3DSA:3.30.70.20|PF11614|PF12801|PF13746|PS00198|PTHR24960|PTHR24960:SF45|SSF54862|TIGR02745 BPTD_RS10975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BPTD_RS10980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13527|PTHR23091|PTHR23091:SF237|SSF55729 BPTD_RS10985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF305|SM00382|SSF52540 BPTD_RS10990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164|PTHR30413|PTHR30413:SF5 BPTD_RS10995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF20 BPTD_RS11000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS11005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PTHR40455|PTHR40455:SF1 BPTD_RS11020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02393|TIGR02937 BPTD_RS11025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002694|IPR006171|IPR006295|IPR013173|IPR013264|IPR016136|IPR019475|IPR030846 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA primase DnaG, DnaB-binding domain|DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:1.10.860.10|G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF08278|PF10410|PF13662|PIRSF002811|PTHR30313|SM00400|SM00493|SM00766|SSF117023|SSF56731|SSF57783|TIGR01391 BPTD_RS11030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001911|IPR018278 Ribosomal protein S21|Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00358|PD005521|PF01165|PR00976|PS01181|PTHR21109|TIGR00030 BPTD_RS11035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 BPTD_RS11040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|PTHR11846|SM00788|SSF52540|TIGR00184 BPTD_RS11045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004516|IPR004517 ATP phosphoribosyltransferase regulatory subunit|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 G3DSA:3.30.930.10|MF_00125|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF5|SSF55681 BPTD_RS11050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001107|IPR001972|IPR010200 Band 7 domain|HflC|Stomatin family GO:0016020|GO:0016021|GO:0052547 PF01145|PIRSF005651|PTHR10264|PTHR10264:SF80|SM00244|SSF117892|TIGR01932 BPTD_RS11055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001107|IPR001972|IPR010201|IPR020980 Band 7 domain|HflK|Menbrane protein HflK, N-terminal|Stomatin family GO:0016020|GO:0016021 PF01145|PF12221|PTHR10264|PTHR10264:SF51|SM00244|SSF117892|TIGR01933 BPTD_RS11060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|TIGR03156 BPTD_RS11065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005001|IPR010920 LSM domain|RNA-binding protein Hfq GO:0003723|GO:0006355 G3DSA:2.30.30.100|MF_00436|PTHR34772|PTHR34772:SF1|SSF50182|TIGR02383 BPTD_RS11070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001917|IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PS00599|PTHR11751|PTHR11751:SF398|SSF53383|TIGR01141 BPTD_RS11075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 AAA+ ATPase domain|GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|PTHR11649|PTHR11649:SF5|SM00382|SSF52540|TIGR00231|TIGR03594 BPTD_RS11080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002372|IPR011047|IPR017687|IPR018391|IPR027295 Outer membrane protein assembly factor BamB|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|MF_00923|PF13360|PTHR32303|PTHR32303:SF8|SM00564|SSF50998|TIGR03300 BPTD_RS11085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990|IPR018704|IPR026039 Tetratricopeptide repeat-like domain|Tetratricopeptide-like helical domain|Uncharacterised protein family UPF0070 GO:0005515 PF09976|PIRSF006170|PTHR38035|SSF48452 BPTD_RS11090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF9|SSF52954|SSF55681|TIGR00442 BPTD_RS11095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004588|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0005506|GO:0008299|GO:0016114|GO:0046429|GO:0055114 MF_00159|PF04551|PIRSF004640|PTHR30454|SSF56014|TIGR00612 BPTD_RS11100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13413|PTHR34475|PTHR34475:SF1|SSF47413 BPTD_RS11105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|PTHR30544|PTHR30544:SF5|SSF102114|TIGR00048 BPTD_RS11110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001564|IPR023005 Nucleoside diphosphate kinase|Nucleoside diphosphate kinase, active site GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PS00469|PTHR11349|SM00562|SSF54919 BPTD_RS11115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|PTHR11946|PTHR11946:SF5|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 BPTD_RS11120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010583 MltA-interacting MipA PF06629 BPTD_RS11125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF518|SM00448|SSF52172 BPTD_RS11130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 BPTD_RS11145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF148|SSF51905|SSF54373 BPTD_RS11150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF4|SSF46785|TIGR00738 BPTD_RS11155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000971|IPR001221|IPR001433|IPR008333|IPR009050|IPR012292|IPR017938|IPR023950 Flavohemoprotein|Globin|Globin-like|Globin/Protoglobin|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0008941|GO:0016491|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 G3DSA:1.10.490.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|MF_01252|PF00042|PF00175|PF00970|PR00410|PTHR22924|PTHR22924:SF49|SSF46458|SSF52343|SSF63380 BPTD_RS11160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003789|IPR019004|IPR023168 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Uncharacterised domain YOR215C, mitochondrial GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.1510.10|PF09424|PTHR28055|PTHR28055:SF1|SSF89095 BPTD_RS11165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS11170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR012772|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|L-2,4-diaminobutyric acid acetyltransferase GO:0008080|GO:0019491|GO:0033816 G3DSA:3.40.630.30|PF00583|SSF55729|TIGR02406 BPTD_RS11175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|SM00347|SSF46785 BPTD_RS11180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|PTHR30514|PTHR30514:SF3|SSF46689|SSF53697 BPTD_RS11185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF78|SSF53383 BPTD_RS11190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|PTHR30024|PTHR30024:SF13|SSF53850|TIGR02122 BPTD_RS11195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010656|IPR011853|IPR021814 Protein of unknown function DUF3394|TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter, 4TM/12TM fusion protein PF06808|PF11874|PTHR33362|PTHR33362:SF1|TIGR02123 BPTD_RS11200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS11210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004899|IPR005546|IPR006315|IPR011050|IPR012332|IPR013425|IPR030895 Autotransporter beta-domain|Autotransporter-associated beta strand repeat|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin, central region|T5SS/PEP-CTERM-associated repeat GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03212|PF03797|PF12951|PTHR35037|PTHR35037:SF1|SM00869|SSF103515|SSF51126|TIGR01414|TIGR02601|TIGR04393 BPTD_RS11220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001736|IPR025202|IPR027379 Cardiolipin synthase N-terminal|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|PF13396|PTHR21248|PTHR21248:SF5|SM00155|SSF56024 BPTD_RS11225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002645|IPR003658 Anti-sigma factor antagonist|STAS domain GO:0006355|GO:0045152 G3DSA:3.30.750.24|PF01740|PTHR33495|PTHR33495:SF3|SSF52091|TIGR00377 BPTD_RS11230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|PF13581|SSF55874 BPTD_RS11235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|PTHR30511|PTHR30511:SF0|SM01005|SSF50621|SSF51419|TIGR00492 BPTD_RS11240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BPTD_RS11245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001932|IPR003660|IPR004010|IPR033480 Double Cache domain 2|HAMP domain|PPM-type phosphatase domain|Single Cache domain 2 GO:0003824|GO:0004871|GO:0007165|GO:0016021 G3DSA:3.30.450.20|PF00672|PF07228|PF08269|PTHR21021|PTHR21021:SF19|SM00304|SM00331|SM01049|SSF158472|SSF81606 BPTD_RS11250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392|PTHR35271 BPTD_RS11255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 PF04107|SSF55931 BPTD_RS11270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 BPTD_RS11275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003522|IPR004846|IPR005644 NolW-like|Type II/III secretion system|Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PF00263|PF03958|PR01337|PTHR30332|PTHR30332:SF5|TIGR02516 BPTD_RS11280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 G3DSA:3.30.1460.10|PF05932|SSF69635 BPTD_RS11285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006135|IPR006307|IPR029025 Type III exporter system, secretion apparatus protein BsaZ|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0016020|GO:0016021 G3DSA:3.40.1690.10|PF01312|PR00950|PTHR30531|SSF160544|TIGR01404 BPTD_RS11290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002010|IPR006304 Type III secretion protein SpaR/YscT|Type III secretion system inner membrane R protein GO:0006605|GO:0006810|GO:0016020|GO:0016021 PF01311|PR00953|PTHR30065|PTHR30065:SF2|TIGR01401 BPTD_RS11295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002191|IPR006306 Bacterial export protein family 3|Type III secretion protein HrpO GO:0006810|GO:0009306|GO:0016020|GO:0016021 PF01313|PIRSF004669|PR00952|PTHR34040|PTHR34040:SF1|TIGR01403 BPTD_RS11300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005773|IPR005838 Type III secretion system inner membrane P protein|Yop virulence translocation protein R GO:0009306|GO:0015031|GO:0016020|GO:0016021 PF00813|PR01302|PS01061|PTHR30587|PTHR30587:SF2|TIGR01102 BPTD_RS11305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001543|IPR003283|IPR013385 Surface presentation of antigen (SpoA)|Type III secretion system apparatus protein YscQ/HrcQ/SpaO|Type III secretion system outer membrane, SpaO GO:0009306|GO:0030254 G3DSA:2.30.330.10|PF01052|PR01339|SSF101801|TIGR02551 BPTD_RS11315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009929 Type III secretion sytem,YscO PF07321 BPTD_RS11320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000194|IPR003593|IPR004100|IPR005714|IPR013380|IPR020003|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI/YscN|ATPase, type III secretion system, H+-transporting|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0006754|GO:0009058|GO:0015992|GO:0016887|GO:0030254|GO:0030257|GO:0046034|GO:0046961 G3DSA:3.40.50.300|PF00006|PF02874|PS00152|PTHR15184|PTHR15184:SF48|SM00382|SSF52540|TIGR01026|TIGR02546 BPTD_RS11325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010586|IPR012842|IPR028987 F-type ATP synthase subunit B-like, membrane domain|Nodulation NolV|Type III secretion system HrpE/YscL GO:0009877 G3DSA:1.20.5.620|PF06635|PTHR34982|PTHR34982:SF2|TIGR02499 BPTD_RS11330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009510 Type III secretion system, secretion protein K GO:0009405 PF06578 BPTD_RS11335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003282|IPR006182 Secretory protein YscJ/FliF|Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PF01514|PR01338|PTHR30046|PTHR30046:SF2|TIGR02544 BPTD_RS11340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012670 Type III secretion system, YscI/HrpB GO:0009306 PF17001|TIGR02497 BPTD_RS11345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BPTD_RS11350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005415|IPR011990 Tetratricopeptide-like helical domain|Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0005515|GO:0006950 G3DSA:1.25.40.10|SSF48452|TIGR02552 BPTD_RS11355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006972 Secretion system effector C, SseC-like GO:0009405 PF04888 BPTD_RS11365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005415|IPR011990|IPR016379 Tetratricopeptide-like helical domain|Type III secretion system, low calcium response, chaperone LcrH/SycD|Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup GO:0005515|GO:0006950 G3DSA:1.25.40.10|PIRSF003165|PR01595|SSF48452|TIGR02552 BPTD_RS11380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010812|IPR013351|IPR013401|IPR015144 Hypersensitivity response secretion-like, HrpJ|Type III secretion regulator, YopN/LcrE/InvE/MxiC|Type III secretion system effector delivery regulator TyeA|Type III secretion system effector delivery regulator TyeA-related GO:0009405|GO:0009986|GO:0019867|GO:0030254|GO:0046903|GO:0050709 PF07201|PF09059|SSF140591|TIGR02511|TIGR02568 BPTD_RS11385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012673 Type III secretion system chaperone SycN GO:0009306 SSF69635|TIGR02503 BPTD_RS11390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012672 Type III secretion system YscX PF09474 BPTD_RS11395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BPTD_RS11400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001712|IPR006302|IPR025505 FHIPEP conserved site|Type III secretion protein HrcV|Type III secretion system FHIPEP GO:0009306|GO:0015031|GO:0016020|GO:0016021 PF00771|PIRSF005419|PR00949|PS00994|PTHR30161|PTHR30161:SF2|TIGR01399 BPTD_RS11405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012843 Type III secretion system YscD/HrpQ PD128471|TIGR02500 BPTD_RS11415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 PF09392|SSF140129 BPTD_RS11420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 PF05932|SSF69635 BPTD_RS11425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS11430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|PTHR30437|SSF46557|SSF54534|TIGR01462 BPTD_RS11435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003122|IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Chemotaxis methyl-accepting receptor, ligand-binding|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0004888|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:1.20.120.30|PF00015|PF00672|PF02203|PR00260|PTHR32089|PTHR32089:SF48|SM00283|SM00304|SSF47170|SSF58104 BPTD_RS11440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PS01116|PTHR11119|PTHR11119:SF49|TIGR00801 BPTD_RS11450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.190.10|PF13343|PTHR30006|PTHR30006:SF5|SSF53850 BPTD_RS11455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS11460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PTHR13847|SSF51905 BPTD_RS11465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017663|IPR026045 ABC transport system, 1-aminoethylphosphonate-binding protein, putative|Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|PTHR30006|PTHR30006:SF9|SSF53850|TIGR03261 BPTD_RS11470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006323|IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2|Phosphonoacetaldehyde hydrolase GO:0008152|GO:0016787|GO:0019700|GO:0050194 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|MF_01375|PF13419|PTHR18901|PTHR18901:SF45|SSF56784|TIGR01422|TIGR01509 BPTD_RS11475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative|ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF3|SSF161098|TIGR03262 BPTD_RS11480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR017666|IPR017871|IPR027417 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2|AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF150|SM00382|SSF50331|SSF52540|TIGR03265 BPTD_RS11485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991|IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type|LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF11|SSF46785|SSF53850|TIGR03339 BPTD_RS11490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017670 Phosphonate degradation operon associated HDIG domain protein PTHR40202|PTHR40202:SF1|SSF109604|TIGR03276 BPTD_RS11495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR11364|PTHR11364:SF0|SM00450|SSF52821 BPTD_RS11505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001915|IPR022919 Peptidase M48|Peptidase M48, protease HtpX, putative GO:0004222|GO:0006508 G3DSA:3.30.2010.10|MF_00188|PF01435|PTHR10120|PTHR10120:SF19 BPTD_RS11510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR002364|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS01162|PTHR11695|PTHR11695:SF605|SM00829|SSF50129|SSF51735 BPTD_RS11515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF5|SSF103481 BPTD_RS11520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|SSF103481 BPTD_RS11525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|SM00347|SSF46785 BPTD_RS11535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:1.20.5.420|G3DSA:2.40.50.100|PF13437|PF13533|PTHR30386|PTHR30386:SF6|SSF111369 BPTD_RS11540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF52|SSF103473|TIGR00711 BPTD_RS11545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001804|IPR011829|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain|Tartrate dehydrogenase GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|PTHR11835:SF37|SM01329|SSF53659|TIGR02089 BPTD_RS11550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|PR00035|PTHR11751|PTHR11751:SF10|SM00345|SSF46785|SSF53383 BPTD_RS11555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF14|SSF53850 BPTD_RS11560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS11565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF2|SSF161098 BPTD_RS11570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF132|SM00382|SSF52540 BPTD_RS11575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS11580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004632|IPR005814|IPR015421|IPR015422|IPR015424 4-aminobutyrate aminotransferase, bacterial|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0003867|GO:0008483|GO:0009448|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF70|SSF53383|TIGR00700 BPTD_RS11585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BPTD_RS11590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|PTHR10625:SF121|SSF52768 BPTD_RS11595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002933|IPR010158|IPR011650 Amidase, hydantoinase/carbamoylase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF001235|PTHR32494|PTHR32494:SF6|SSF53187|SSF55031|TIGR01879 BPTD_RS11600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF70|SSF103481 BPTD_RS11605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF210|SSF53720 BPTD_RS11610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|PTHR10996|PTHR10996:SF114|SSF51735 BPTD_RS11615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF81|SSF53383 BPTD_RS11620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PF01235|PR00175|PS00873|PTHR30330|PTHR30330:SF3|TIGR00835 BPTD_RS11625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR027417|IPR033186 Helicase HerA-like C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05872|PTHR30121|PTHR30121:SF3|SSF52540 BPTD_RS11630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|PTHR12532|SSF75625|TIGR01033 BPTD_RS11635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PTHR10520|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 BPTD_RS11640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001260|IPR018375 Coproporphyrinogen III oxidase, aerobic|Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 G3DSA:3.40.1500.10|MF_00333|PF01218|PIRSF000166|PR00073|PS01021|PTHR10755|SSF102886 BPTD_RS11645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|PTHR12039|SSF52374|TIGR00125|TIGR00482 BPTD_RS11650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|PTHR21043|SSF81301|TIGR00090 BPTD_RS11655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003742|IPR029026|IPR029028 Alpha/beta knot methyltransferases|SPOUT methyltransferase, predicted|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|PTHR33603|PTHR33603:SF1|SSF75217 BPTD_RS11660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 BPTD_RS11665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR004899|IPR005546|IPR006315|IPR011050|IPR012332 Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin virulence factor family|Pertactin, central region GO:0007155|GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03212|PF03797|PR01484|SM00869|SSF103515|SSF51126|TIGR01414 BPTD_RS11695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS11700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|PF10150|PTHR30001|SM00316|SSF50249|TIGR00757 BPTD_RS11705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001086|IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PIRSF001500|PTHR21022|PTHR21022:SF0|SSF53850|SSF55021 BPTD_RS11710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|PTHR30055:SF71|SSF46689 BPTD_RS11715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF65|SSF103473 BPTD_RS11720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR011527|IPR011917|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter, lipid A export, MsbA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0034040|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123|TIGR02203 BPTD_RS11725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756 BPTD_RS11730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698|PTHR30336|PTHR30336:SF1 BPTD_RS11735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692|PTHR36931 BPTD_RS11740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13439|PF13692|PTHR12526|SSF53756 BPTD_RS11745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR34216|SSF88713 BPTD_RS11750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PTHR30443|SSF53649 BPTD_RS11755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 BPTD_RS11760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|SSF53448 BPTD_RS11765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR34216|SSF88713 BPTD_RS11770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 BPTD_RS11775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003141|IPR004013|IPR004365|IPR004805|IPR011708|IPR012340|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF01336|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF0|SM00481|SSF89550|TIGR00594 BPTD_RS11780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007803|IPR027443 Aspartyl/asparaginy/proline hydroxylase|Isopenicillin N synthase-like GO:0018193 G3DSA:2.60.120.330|PF05118|PTHR12366|PTHR12366:SF25|SSF51197 BPTD_RS11785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001650|IPR003593|IPR007502|IPR010222|IPR011709|IPR014001|IPR024590|IPR027417 AAA+ ATPase domain|Domain of unknown function DUF1605|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase HrpA|RNA helicase HrpA, C-terminal GO:0004004|GO:0004386 G3DSA:3.40.50.300|PF00271|PF04408|PF07717|PF11898|PTHR18934|PTHR18934:SF109|SM00382|SM00487|SM00490|SM00847|SSF52540|TIGR01967 BPTD_RS11790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR001048|IPR010167|IPR016181 Acyl-CoA N-acyltransferase|Amino-acid N-acetyltransferase (ArgA)|Aspartate/glutamate/uridylate kinase|GNAT domain GO:0004042|GO:0005737|GO:0006526|GO:0008080 G3DSA:3.40.1160.10|G3DSA:3.40.630.30|MF_01105|PF00583|PF00696|PIRSF000423|PTHR30602|SSF53633|SSF55729|TIGR01890 BPTD_RS11795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007457 Fe(II) trafficking protein YggX GO:0005506 G3DSA:1.10.3880.10|MF_00686|PD029191|PF04362|PIRSF029827|PTHR36965|PTHR36965:SF1|SSF111148 BPTD_RS11800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007312|IPR008475 Bacterial phospholipase C, C-terminal domain|Phosphoesterase GO:0004629|GO:0016042|GO:0016788 PF04185|PF05506|PTHR31956|PTHR31956:SF6 BPTD_RS11805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|PTHR10010|PTHR10010:SF14|SSF109755|TIGR02135 BPTD_RS11810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004788|IPR020672 Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|PTHR11934|PTHR11934:SF11|SSF100950|SSF75445|TIGR00021 BPTD_RS11815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0055114 G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PS00072|PS00073|PTHR10909|PTHR10909:SF289|SSF47203|SSF56645 BPTD_RS11820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003798 DNA recombination RmuC PF02646|PTHR30563|SSF58113 BPTD_RS11825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019647 PhoP regulatory network protein YrbL PF10707 BPTD_RS11830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003180|IPR011034 Formyl transferase, C-terminal-like|Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003824|GO:0003905|GO:0006284 G3DSA:3.10.300.10|MF_00527|PF02245|PTHR10429|PTHR10429:SF0|SSF50486 BPTD_RS11835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006504|IPR006660|IPR012336 Arsenate reductase-like|Thioredoxin-like fold|Transcriptional regulator Spx/MgsR G3DSA:3.40.30.10|PF03960|PTHR30041|PTHR30041:SF3|SSF52833|TIGR01617 BPTD_RS11840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30222|PTHR30222:SF1|SSF161098 BPTD_RS11845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF5|SSF161098 BPTD_RS11850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR005893|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0015417|GO:0015846|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF481|SM00382|SSF50331|SSF52540|TIGR01187 BPTD_RS11855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 G3DSA:3.40.190.10|PF13416|PIRSF019574|PR00909|PTHR30222|PTHR30222:SF11|SSF53850 BPTD_RS11860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010440|IPR011009|IPR022826 3-deoxy-D-manno-octulosonic acid kinase|Lipopolysaccharide kinase|Protein kinase-like domain GO:0005524|GO:0016020|GO:0016773 G3DSA:1.10.510.10|MF_00521|PF06293|SSF56112 BPTD_RS11865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001486|IPR009050|IPR012292|IPR019795 Globin, bacterial-like, conserved site|Globin-like|Globin/Protoglobin|Truncated hemoglobin GO:0015671|GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|PS01213|PTHR10681|SSF46458 BPTD_RS11870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30287 BPTD_RS11875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|PTHR33376|PTHR33376:SF2|TIGR00787 BPTD_RS11880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011|PTHR35011:SF2 BPTD_RS11885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF2|TIGR00786 BPTD_RS11890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS11905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002020|IPR010953|IPR016142|IPR016143|IPR019810|IPR024176 Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase, type I|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0004108|GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|PTHR11739|SSF48256|TIGR01798 BPTD_RS11910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005631 Flavinator of succinate dehydrogenase G3DSA:1.10.150.250|PF03937|SSF109910 BPTD_RS11915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR004489|IPR009051|IPR012675|IPR017900|IPR025192 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13534|PS00198|PTHR11921|PTHR11921:SF29|SSF46548|SSF54292|TIGR00384 BPTD_RS11920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003952|IPR003953|IPR011281|IPR014006|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase, flavoprotein subunit|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0006099|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00411|PS00504|PTHR11632|PTHR11632:SF5|SSF46977|SSF51905|SSF56425|TIGR01812|TIGR01816 BPTD_RS11925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000701|IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0016021|GO:0016627|GO:0020037 G3DSA:1.20.1300.10|PF01127|PIRSF000169|PTHR38689|PTHR38689:SF1|SSF81343|TIGR02968 BPTD_RS11930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000701|IPR014314 Succinate dehydrogenase, cytochrome b556 subunit|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0016627|GO:0045281 G3DSA:1.20.1300.10|PF01127|PIRSF000178|PTHR10978|PTHR10978:SF4|SSF81343|TIGR02970 BPTD_RS11935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PTHR11751|PTHR11751:SF292|SM00345|SM00866|SSF46785|SSF64288 BPTD_RS11940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001236|IPR001557|IPR010945|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, type 2|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0006108|GO:0016491|GO:0016615|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_01517|PF00056|PF02866|PIRSF000102|PTHR23382|SSF51735|SSF56327|TIGR01759 BPTD_RS11950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002020|IPR011278|IPR016142|IPR016143|IPR019810|IPR024176 2-methylcitrate synthase/citrate synthase type I|Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|PTHR11739|SSF48256|TIGR01800 BPTD_RS11955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000573|IPR001030|IPR012708|IPR015928|IPR015931|IPR015932|IPR015937 2-methylisocitrate dehydratase AcnD, Fe/S-dependent|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0008152|GO:0019679 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PTHR11670|PTHR11670:SF43|SSF52016|SSF53732|TIGR02333 BPTD_RS11960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007400|IPR012709 2-methyl-aconitate isomerase PrpF|PrpF protein GO:0016853|GO:0019629 G3DSA:3.10.310.10|PF04303|PTHR30349|PTHR30349:SF21|SSF54506|TIGR02334 BPTD_RS11965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656|IPR012705 2-methylcitrate dehydratase PrpD|MmgE/PrpD GO:0016829|GO:0019629|GO:0047547|GO:0051537 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF19|SSF103378|TIGR02330 BPTD_RS11970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005265 Uncharacterised protein family UPF0093 PF03653|PIRSF004638|PTHR40255 BPTD_RS11975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000241|IPR002052|IPR004114|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Putative RNA methylase domain|S-adenosyl-L-methionine-dependent methyltransferase|THUMP domain GO:0003676|GO:0003723|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF01170|PF02926|PS00092|PS01261|PTHR14911|PTHR14911:SF13|SM00981|SSF53335 BPTD_RS11985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010432 RDD PF06271 BPTD_RS11990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR34990|PTHR34990:SF2|SSF56300 BPTD_RS11995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 BPTD_RS12000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|PTHR13061|SSF51161 BPTD_RS12005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000397|IPR016153|IPR016154|IPR023212 Heat shock protein Hsp33|Heat shock protein Hsp33, C-terminal|Heat shock protein Hsp33, N-terminal|Heat shock protein Hsp33, helix hairpin bin domain GO:0005737|GO:0006457|GO:0051082 G3DSA:1.10.287.480|G3DSA:3.55.30.10|G3DSA:3.90.1280.10|MF_00117|PF01430|PIRSF005261|PTHR30111|PTHR30111:SF1|SSF118352|SSF64397 BPTD_RS12015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR38599|PTHR38599:SF1|SSF51182 BPTD_RS12020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BPTD_RS12025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR14194|PTHR14194:SF69|SSF51735 BPTD_RS12030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|PTHR23083|SM00028|SM00862|SSF46894|SSF48452 BPTD_RS12035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007060|IPR023081 Cell division protein FtsB|Septum formation initiator FtsL/DivIC GO:0007049 MF_00599|PF04977|PTHR37485|PTHR37485:SF1 BPTD_RS12040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|PTHR11902|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 BPTD_RS12045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010753|IPR011008 Dimeric alpha-beta barrel|Domain of unknown function DUF1330 G3DSA:3.30.70.900|PF07045|PTHR41521|SSF54909 BPTD_RS12050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|MF_00056|PF00793|PTHR21057|PTHR21057:SF2|SSF51569|TIGR01362 BPTD_RS12055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|PTHR11550|SSF52317|SSF52540|TIGR00337 BPTD_RS12060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS12065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000587|IPR000994|IPR028980|IPR029149|IPR032416 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, C-terminal domain|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PF16188|PF16189|PTHR10804|PTHR10804:SF87|SSF53092|SSF55920 BPTD_RS12070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007035|IPR027476 D-aminopeptidase, N-terminal|Peptidase M55, D-aminopeptidase G3DSA:3.40.50.10780|PF04951|SSF63992 BPTD_RS12075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005321|IPR016117 ArgJ-like domain|Peptidase S58, DmpA G3DSA:3.60.70.12|PF03576|PTHR36512|PTHR36512:SF1|SSF56266 BPTD_RS12080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF57|SSF161098 BPTD_RS12085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF59|SSF161098 BPTD_RS12090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF32|SSF53850 BPTD_RS12095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF442|SM00382|SSF52540|TIGR01727 BPTD_RS12100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000246|IPR029055 Nucleophile aminohydrolases, N-terminal|Peptidase T2, asparaginase 2 GO:0016787 PF01112|PTHR10188|PTHR10188:SF22|SSF56235 BPTD_RS12105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|PTHR30514|PTHR30514:SF1|SSF46689|SSF53697 BPTD_RS12110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004164|IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase active site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|PS01274|PTHR13707|SM00882|SSF100950|TIGR02428 BPTD_RS12120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|PTHR31793|PTHR31793:SF1|SSF54637 BPTD_RS12125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007859|IPR023753 ETF-QO/FixX|FAD/NAD(P)-binding domain GO:0016491|GO:0051536|GO:0055114 G3DSA:3.50.50.60|PF05187|PF13450|PR00420|PTHR10617|PTHR10617:SF107|SSF51905|SSF54373|SSF54862 BPTD_RS12130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF430|SSF51735 BPTD_RS12135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|SSF48264 BPTD_RS12140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|PTHR37811|PTHR37811:SF2|SSF54909 BPTD_RS12145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001597|IPR015421|IPR015422|IPR015424|IPR023603 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Threonine aldolase GO:0003824|GO:0006520|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF017617|PTHR10289|PTHR10289:SF5|SSF53383 BPTD_RS12150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|SSF103481 BPTD_RS12155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR011904|IPR020845|IPR025110|IPR032387 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetate-CoA ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0003987|GO:0008152|GO:0016208|GO:0019427 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_01123|PF00501|PF13193|PF16177|PS00455|PTHR24095|PTHR24095:SF178|SSF56801|TIGR02188 BPTD_RS12160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR020846|IPR024671 Autophagy-related protein 22-like|Major facilitator superfamily domain G3DSA:1.20.1250.20|PF11700|PTHR23519|SSF103473 BPTD_RS12165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005624 Haem-degrading PF03928|PTHR34309|PTHR34309:SF4|SSF143744 BPTD_RS12170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR012694|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Propionate--CoA ligase GO:0003824|GO:0008152|GO:0019629|GO:0050218 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|PTHR24095:SF165|SSF56801|TIGR02316 BPTD_RS12175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|PTHR21666|SSF54001 BPTD_RS12180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016772 Uncharacterised conserved protein UCP020408 PF10087|PIRSF020408 BPTD_RS12185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS12190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF6|SSF46785|SSF53850 BPTD_RS12195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|PTHR11699:SF183|SSF53720|TIGR01722 BPTD_RS12200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF17|SSF53822 BPTD_RS12205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30579|PTHR30579:SF3|SSF46785|SSF53850 BPTD_RS12210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005495|IPR030922 LPS export ABC transporter permease LptF|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|PTHR33529|PTHR33529:SF2|TIGR04407 BPTD_RS12215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|PTHR11963|PTHR11963:SF13|SSF52949|SSF53187 BPTD_RS12220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 G3DSA:3.40.50.10110|PF04364|PTHR38767|SSF102400 BPTD_RS12230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006214 Bax inhibitor 1-related PF01027|PTHR23291|PTHR23291:SF37 BPTD_RS12235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS12240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 G3DSA:3.40.630.10|PF04952|PIRSF039012|PTHR37326|PTHR37326:SF1|SSF53187 BPTD_RS12245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS12250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|PTHR10314|SSF53686 BPTD_RS12255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30427|PTHR30427:SF1|SSF46785|SSF53850 BPTD_RS12260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|PF02565|PF11967|PTHR33991|SSF50249|SSF57863|TIGR00613 BPTD_RS12265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PR00326|PTHR11649|PTHR11649:SF3|SSF52540|SSF54814|TIGR00231|TIGR00436 BPTD_RS12270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|PTHR11207|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 BPTD_RS12275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000223|IPR015927|IPR019533|IPR019756|IPR019757|IPR019759|IPR019766|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26|Peptidase S26A, all-beta subdomain|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, lysine active site|Peptidase S26A, signal peptidase I, serine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|G3DSA:2.170.230.10|PF00717|PF10502|PR00727|PS00501|PS00760|PTHR12383|PTHR12383:SF27|SSF51306|TIGR02227 BPTD_RS12280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009000|IPR009022|IPR013842|IPR027417|IPR031157 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|PTHR23115|PTHR23115:SF175|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01393 BPTD_RS12285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF98|SM00228|SSF50156|SSF50494|TIGR02037 BPTD_RS12290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005588|IPR033434|IPR033436 MucB/RseB|MucB/RseB, C-terminal|MucB/RseB, N-terminal PF03888|PF17188|PIRSF005427|PTHR38782|PTHR38782:SF1 BPTD_RS12295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PF03872|SSF89069 BPTD_RS12300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR014286 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 RpoE type|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|SSF88659|SSF88946|TIGR02937|TIGR02939 BPTD_RS12310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|PTHR11712|SM00825|SSF53901|TIGR03150 BPTD_RS12315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003231|IPR006162|IPR009081 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|PTHR20863|SSF47336|TIGR00517 BPTD_RS12320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF635|SM00822|SSF51735|TIGR01830 BPTD_RS12325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|PTHR10982|SM00827|SSF52151|SSF55048|TIGR00128 BPTD_RS12330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR18919|PTHR18919:SF109|SSF53901|TIGR00747 BPTD_RS12335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003664|IPR012281|IPR024084 Fatty acid synthesis PlsX protein|Isopropylmalate dehydrogenase-like domain|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|PTHR30100|PTHR30100:SF1|SSF53659|TIGR00182 BPTD_RS12340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|PTHR35534|SSF57829|TIGR01031 BPTD_RS12345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003772 Protein of unknown function DUF177 PF02620|PTHR38099 BPTD_RS12350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|PTHR11746|PTHR11746:SF102|SSF52972|TIGR00172 BPTD_RS12355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000878|IPR008189|IPR014776 Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|PF00590|PIRSF005917|PTHR21091|PTHR21091:SF118|SSF53790 BPTD_RS12360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002477|IPR002502 N-acetylmuramoyl-L-alanine amidase domain|Peptidoglycan binding-like GO:0008745|GO:0009253 G3DSA:1.10.101.10|G3DSA:3.40.80.10|PF01471|PF01510|PTHR30417|SM00644|SSF47090|SSF55846 BPTD_RS12365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032692 Integral membrane protein YccS, N-terminal PF12805|PF13515|PTHR30509|PTHR30509:SF8 BPTD_RS12370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23512|PTHR23512:SF1|SSF103473 BPTD_RS12375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005583 Peroxide stress protein YaaA MF_00652|PF03883|PTHR30283|PTHR30283:SF3 BPTD_RS12380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS12385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR011294|IPR016040|IPR020904 3-hydroxybutyrate dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0003858|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF328|SSF51735|TIGR01963 BPTD_RS12390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR16254|PTHR16254:SF6 BPTD_RS12400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023753|IPR025700 FAD/NAD(P)-binding domain|L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13434|PTHR23024|PTHR23024:SF215|SSF51905 BPTD_RS12405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016181|IPR019432 Acyl-CoA N-acyltransferase|Siderophore biosynthesis protein, conserved domain G3DSA:3.40.630.30|PF13523|PTHR31438|SM01006|SSF55729 BPTD_RS12410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007310|IPR022770 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal|Ferric iron reductase FhuF domain GO:0015343|GO:0019290 PF04183|PF06276|PTHR34384|PTHR34384:SF5 BPTD_RS12415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023998|IPR024726 Ferric iron reductase, C-terminal|Siderophore ferric iron reductase, AHA1954 family GO:0051537 PF11575|TIGR03950 BPTD_RS12420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PTHR21266|PTHR21266:SF2|SSF50022|SSF55961 BPTD_RS12425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PTHR11019|PTHR11019:SF61|SM00342|SSF46689 BPTD_RS12430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23502|PTHR23502:SF19|SSF103473 BPTD_RS12435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF37|SSF56935|TIGR01783 BPTD_RS12440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|PTHR33508|PTHR33508:SF1|TIGR00427 BPTD_RS12450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 BPTD_RS12475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|PTHR11778|PTHR11778:SF0|SSF46589|SSF55681|TIGR00414 BPTD_RS12480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR003959|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0006260 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PF16193|PTHR13779|PTHR13779:SF7|SM00382|SSF48019|SSF52540 BPTD_RS12485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004564|IPR018323|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA, Proteobacteria|Outer membrane lipoprotein carrier protein LolA-like GO:0042597|GO:0042953|GO:0042954 G3DSA:2.50.20.10|MF_00240|PF03548|PTHR35869|SSF89392|TIGR00547 BPTD_RS12490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002543|IPR011991|IPR018541|IPR025199|IPR027417 DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PF13491|PTHR22683|PTHR22683:SF41|SM00843|SSF46785|SSF52540 BPTD_RS12495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905|TIGR01292 BPTD_RS12500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002625 Smr domain PF01713|PTHR35562|SM00463|SSF160443 BPTD_RS12505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|PTHR30561|PTHR30561:SF1|SSF103481 BPTD_RS12510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS12515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001734|IPR018247|IPR019899 EF-Hand 1, calcium-binding site|Sodium/solute symporter|Sodium/solute symporter, VC2705 subfamily GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PS00018|PTHR11819|PTHR11819:SF159|TIGR03648 BPTD_RS12520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019886 Sodium symporter small subunit, predicted PF13937|TIGR03647 BPTD_RS12525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MF_00275|PF03814|PIRSF001294|PTHR30607|TIGR00680 BPTD_RS12530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001757|IPR006391|IPR008250|IPR018303|IPR023214|IPR023299 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, B chain, subfamily IA|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0005524|GO:0006813|GO:0008556|GO:0016021|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|MF_00285|PF00122|PF00702|PR00119|PS00154|PTHR24093|PTHR24093:SF49|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01497 BPTD_RS12535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MF_00276|PF02669|PIRSF001296|PTHR30042|PTHR30042:SF2|TIGR00681 BPTD_RS12540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003018|IPR003594|IPR003661|IPR003852|IPR014729|IPR025201|IPR027417|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Rossmann-like alpha/beta/alpha sandwich fold|Sensor protein KdpD, transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0005515|GO:0007165|GO:0016020 G3DSA:1.10.287.130|G3DSA:1.20.120.620|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.300|G3DSA:3.40.50.620|PF00512|PF02518|PF02702|PF13492|PF13493|PTHR24423|PTHR24423:SF562|SM00388|SSF47384|SSF52402|SSF55781|SSF55874 BPTD_RS12545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF399|SM00448|SM00862|SSF52172 BPTD_RS12550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS12555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007016 O-antigen ligase-related PF04932|PTHR37422|PTHR37422:SF2 BPTD_RS12560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756 BPTD_RS12565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001804|IPR004439|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0004450|GO:0006099|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|PTHR11835:SF52|SM01329|SSF53659|TIGR00183 BPTD_RS12570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014993 Protein of unknown function DUF1841 PF08897 BPTD_RS12575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00605|PTHR33751|PTHR33751:SF3|SSF46626 BPTD_RS12580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PTHR33751|SSF46626 BPTD_RS12585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS12590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|PTHR22908|SM00382|SSF52540 BPTD_RS12595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008912 Uncharacterised protein family CoxE-like PF05762 BPTD_RS12600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|PTHR23091|PTHR23091:SF187|SSF55729 BPTD_RS12610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|PTHR11851:SF136|SSF63411 BPTD_RS12615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF231|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 BPTD_RS12620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF173|SSF100920|SSF100934|SSF53067|TIGR02350 BPTD_RS12625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 BPTD_RS12630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|PTHR21237|SSF51064|SSF58014 BPTD_RS12640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001015|IPR019772 Ferrochelatase|Ferrochelatase, active site GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|PTHR11108|SSF53800|TIGR00109 BPTD_RS12645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002571|IPR005104|IPR011991|IPR021153|IPR029016 GAF domain-like|Heat-inducible transcription repressor HrcA|Heat-inducible transcription repressor HrcA, C-terminal|Winged helix-turn-helix DNA-binding domain|Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|MF_00081|PF01628|PF03444|PIRSF005485|PTHR34824|SSF46785|SSF55781|TIGR00331 BPTD_RS12650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|PTHR20275|SSF111331 BPTD_RS12655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003395|IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|PTHR11059|SSF52540|TIGR00634 BPTD_RS12660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|SSF46785 BPTD_RS12665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007450|IPR026592 Lipoprotein SmpA/OmlA|Outer membrane protein assembly factor BamE GO:0019867 MF_00925|PF04355|PTHR37482|PTHR37482:SF1 BPTD_RS12670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000846|IPR016040|IPR022663|IPR022664|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|PTHR20836|SSF51735|SSF55347|TIGR00036 BPTD_RS12675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|PTHR21071|PTHR21071:SF6|SSF56176|SSF56194|TIGR00179 BPTD_RS12685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|SSF53474 BPTD_RS12690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS12695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS12700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002376|IPR004810 Formyl transferase, N-terminal|Formyltetrahydrofolate deformylase GO:0006189|GO:0008864|GO:0009058|GO:0016742 G3DSA:3.30.70.260|G3DSA:3.40.50.170|MF_01927|PF00551|PIRSF036480|PR01575|PTHR10520|PTHR10520:SF7|SSF53328|SSF55021|TIGR00655 BPTD_RS12705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007375 Sarcosine oxidase, gamma subunit PF04268|SSF103025 BPTD_RS12710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000103|IPR006222|IPR006277|IPR013977|IPR023753|IPR027266|IPR029043 FAD/NAD(P)-binding domain|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Sarcosine oxidase, alpha subunit GO:0005515|GO:0008115|GO:0016491|GO:0046653|GO:0055114 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|G3DSA:3.50.50.60|PF01571|PF07992|PF08669|PF13510|PIRSF037980|PR00368|PR00469|PTHR13847|PTHR13847:SF189|SSF101790|SSF103025|SSF51905|TIGR01372 BPTD_RS12715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 PF04267 BPTD_RS12720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR006278|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|Sarcosine oxidase subunit beta GO:0008115|GO:0016491|GO:0046653|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF44|SSF51905|SSF54373|TIGR01373 BPTD_RS12725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008257|IPR032466 Metal-dependent hydrolase|Renal dipeptidase family GO:0006508|GO:0016805 G3DSA:3.20.20.140|PF01244|PTHR10443|SSF51556 BPTD_RS12730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850 BPTD_RS12735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|PTHR11091|SSF89733 BPTD_RS12740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00767|SSF51735|SSF53223 BPTD_RS12745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS12750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS12760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF1 BPTD_RS12765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000253|IPR001482|IPR003593|IPR008984|IPR027417 AAA+ ATPase domain|Forkhead-associated (FHA) domain|P-loop containing nucleoside triphosphate hydrolase|SMAD/FHA domain|Type II secretion system protein E GO:0005515|GO:0005524|GO:0006810 G3DSA:2.60.200.20|G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF00498|PTHR30258|PTHR30258:SF3|SM00240|SM00382|SSF49879|SSF52540 BPTD_RS12770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001775|IPR004845|IPR004846|IPR032789 GspD/PilQ family|Pilus formation protein, N-terminal|Type II secretion system GspD, conserved site|Type II/III secretion system GO:0008565|GO:0009306 PF00263|PF13629|PR00811|PS00875|PTHR30332 BPTD_RS12775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013974|IPR017592|IPR031571 Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain PF08666|PF16976|SM00858|TIGR03177 BPTD_RS12800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012556 Entericidin A/B GO:0009636|GO:0016020 PF08085 BPTD_RS12805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF7|SSF56529 BPTD_RS12810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|MF_00209|PF00719|PTHR10286|SSF50324 BPTD_RS12815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005254|IPR010817|IPR011990 HemY, N-terminal|Heme biosynthesis-associated TPR protein|Tetratricopeptide-like helical domain GO:0005515|GO:0016020|GO:0042168 G3DSA:1.25.40.10|PF07219|SSF48452|TIGR00540 BPTD_RS12820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PF04375|PTHR38043 BPTD_RS12825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|PTHR38042|PTHR38042:SF1|SSF69618 BPTD_RS12830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000860|IPR022417|IPR022418|IPR022419 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|PTHR11557|SSF53850|SSF54782|TIGR00212 BPTD_RS12840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005496|IPR022301 Integral membrane protein TerC|Integral membrane protein YjbE GO:0016021 PF03741|PTHR30060|TIGR03717 BPTD_RS12845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005496|IPR022301 Integral membrane protein TerC|Integral membrane protein YjbE GO:0016021 PF03741|PTHR30060|TIGR03717 BPTD_RS12850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|PTHR11117|PTHR11117:SF2|SM00881|SSF51735|SSF52210|TIGR01019 BPTD_RS12855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|PTHR11815|SSF52210|SSF56059|TIGR01016 BPTD_RS12860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021312 Protein of unknown function DUF2889 PF11136 BPTD_RS12865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002629|IPR006276|IPR013215 Cobalamin-independent methionine synthase|Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652|GO:0009086 G3DSA:3.20.20.210|MF_00172|PF01717|PF08267|PIRSF000382|PTHR30519|PTHR30519:SF0|SSF51726|TIGR01371 BPTD_RS12870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF25|SSF46785|SSF53850 BPTD_RS12875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003783|IPR011991 Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain GO:0006282 G3DSA:1.10.10.10|MF_01114|PF02631|PTHR33602|PTHR33602:SF1 BPTD_RS12880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|PTHR22942|PTHR22942:SF1|SM00382|SSF52540|SSF54752|TIGR02012 BPTD_RS12885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF279|SM00448|SM00862|SSF46894|SSF52172 BPTD_RS12890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR013727 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF08521|PR00344|PTHR24423|PTHR24423:SF474|SM00304|SM00387|SM00388|SSF47384|SSF55874 BPTD_RS12895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00217|PTHR23508|PTHR23508:SF7|SSF103473 BPTD_RS12900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|PTHR11941:SF71|SSF52096 BPTD_RS12905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540 BPTD_RS12910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30183|SSF161098 BPTD_RS12915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.190.10|PF13343|PTHR30006|SSF53850 BPTD_RS12920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24321|PTHR24321:SF6|SM00822|SSF51735 BPTD_RS12925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PTHR13078|SSF54637 BPTD_RS12930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|SSF50249 BPTD_RS12935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016039 Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PTHR18919|PTHR18919:SF108|SSF53901 BPTD_RS12940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF26|SSF46785|SSF53850 BPTD_RS12945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS12955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007476 Putative exonuclease, RdgC GO:0006310 MF_00194|PF04381|PTHR38103|PTHR38103:SF1 BPTD_RS12960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF16|SSF53671|TIGR00670 BPTD_RS12975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012556 Entericidin A/B GO:0009636|GO:0016020 PF08085 BPTD_RS12980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007346 Endonuclease I GO:0004518 PF04231|PTHR33607|SSF54060 BPTD_RS13000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR24559|SSF53098 BPTD_RS13015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007461 Ysc84 actin-binding domain PF04366 BPTD_RS13020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF54001 BPTD_RS13030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PTHR30204|PTHR30204:SF15|SM00422|SSF46955 BPTD_RS13035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000119|IPR005684|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 G3DSA:4.10.520.10|MF_00380|PF00216|PR01727|PS00045|PTHR33175|PTHR33175:SF2|SM00411|SSF47729|TIGR00987 BPTD_RS13040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|PTHR10947|PTHR10947:SF0|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 BPTD_RS13045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|PTHR11538|SSF46589|SSF55681|TIGR00468 BPTD_RS13050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|PTHR10986|PTHR10986:SF12|SSF74731|TIGR01032 BPTD_RS13055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|PTHR33343|SSF143034|TIGR00001 BPTD_RS13060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008180|IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0004170|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|PTHR11241|SSF51283|TIGR00576 BPTD_RS13070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PTHR11751|PTHR11751:SF314|SM00345|SSF46785|SSF53383 BPTD_RS13085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|SSF53335 BPTD_RS13095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181|IPR032962 Acetyltransferase HPA2/HPA3|Acyl-CoA N-acyltransferase|GNAT domain GO:0008080|GO:0016746 G3DSA:3.40.630.30|PF00583|PTHR10545|PTHR10545:SF39|SSF55729 BPTD_RS13100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353|PTHR30353:SF5 BPTD_RS13105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007404 LexA-binding, inner membrane-associated putative hydrolase PF04307|PTHR40031|PTHR40031:SF1 BPTD_RS13110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009061|IPR015358 Putative DNA-binding domain|Transcription regulator MerR, DNA binding G3DSA:1.10.1660.10|PF09278|SSF46955 BPTD_RS13125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|SM00354|SSF47413|SSF53822 BPTD_RS13130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF586|SM00382|SSF52540 BPTD_RS13135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF10|SSF161098 BPTD_RS13140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS13145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|SSF53850 BPTD_RS13150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PTHR11014|SSF53187|SSF55031 BPTD_RS13155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014922 Domain of unknown function DUF1801 PF08818|SSF159888 BPTD_RS13160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324|PTHR30086|PTHR30086:SF3 BPTD_RS13165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007396|IPR012349 FMN-binding split barrel|Transcriptional regulator PAI 2-type GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF04299|PIRSF010372|PTHR35802|PTHR35802:SF1|SSF50475 BPTD_RS13170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PR00035|PTHR11751|PTHR11751:SF10|SM00345|SSF46785|SSF53383 BPTD_RS13175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23534|SSF103473 BPTD_RS13180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF498|SM00829|SSF50129|SSF51735 BPTD_RS13185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001613|IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain|Flavin amine oxidase GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.660.10|PF01593|PF13450|PR00757|PTHR10742|SSF51905|SSF54373 BPTD_RS13190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011051|IPR014710|IPR025979 ChrR-like cupin domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF12973|SSF51182 BPTD_RS13195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF26|SSF46785|SSF53850 BPTD_RS13200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002818|IPR009057|IPR018060|IPR018062|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|PS00041|PTHR11019|PTHR11019:SF68|SM00342|SSF46689|SSF52317 BPTD_RS13205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR15032|PTHR15032:SF13|SSF56281 BPTD_RS13210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PF13515 BPTD_RS13215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001279|IPR011108|IPR022712 Beta-Casp domain|Metallo-beta-lactamase|Zn-dependent metallo-hydrolase, RNA specificity domain G3DSA:3.60.15.10|PF00753|PF07521|PF10996|PTHR11203|PTHR11203:SF11|SM00849|SM01027|SSF56281 BPTD_RS13225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PTHR11814|SSF52091|TIGR00815 BPTD_RS13230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF58|SSF52317 BPTD_RS13235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002840|IPR008279|IPR012016|IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel|Domain of unknown function DUF126|PEP-utilising enzyme, mobile domain|Uncharacterised protein family UPF0107 GO:0016310|GO:0016772 G3DSA:3.50.30.10|PF01989|PIRSF004966|PTHR36577|SSF52016 BPTD_RS13240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007506 Domain of unknown function DUF521 PF04412|PTHR36577|PTHR36577:SF1 BPTD_RS13245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF0|SSF161098 BPTD_RS13250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 BPTD_RS13255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF1|SSF53850 BPTD_RS13260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|PTHR22642|PTHR22642:SF2|SSF51338|SSF51556 BPTD_RS13265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS13275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|PTHR23501|PTHR23501:SF26|SSF103473 BPTD_RS13280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PTHR30328|PTHR30328:SF19|SSF46689|SSF48498 BPTD_RS13285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|PTHR37419|PTHR37419:SF3|TIGR03071 BPTD_RS13290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BPTD_RS13295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PTHR11922|PTHR11922:SF2|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 BPTD_RS13300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|PTHR11911|PTHR11911:SF6|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 BPTD_RS13305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018715 Protein of unknown function DUF2239 PF09998 BPTD_RS13310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 BPTD_RS13320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000014|IPR000792|IPR011991|IPR013656|IPR016032 PAS domain|PAS fold-4|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|PF00196|PF08448|SM00421|SSF46894|SSF55785 BPTD_RS13330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401 BPTD_RS13340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13476|SSF52540 BPTD_RS13345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004843|IPR014577|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Uncharacterised conserved protein UCP033093, metallophosphoesterase-type GO:0016787 G3DSA:3.60.21.10|PF00149|PIRSF033093|PTHR30337|PTHR30337:SF5|SSF56300 BPTD_RS13350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023080|IPR023753 D-amino acid dehydrogenase DadA|FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0008718|GO:0016491|GO:0019478|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|MF_01202|PF01266|PTHR13847|PTHR13847:SF148|SSF51905|SSF54373 BPTD_RS13355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PTHR30154|PTHR30154:SF0|SM00344|SSF46785|SSF54909 BPTD_RS13360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007462 Protein of unknown function DUF502 PF04367|PTHR31876|PTHR31876:SF1 BPTD_RS13365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 PD119415 BPTD_RS13370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014597 ABC transporter, periplasmic substrate-binding protein GO:0005215 G3DSA:3.40.190.10|PF13416|PIRSF035859|PTHR30061|SSF53850 BPTD_RS13375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018678 Protein of unknown function DUF2160, transmembrane PF09928 BPTD_RS13380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR32243|PTHR32243:SF18|SSF161098 BPTD_RS13385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PTHR30193|SSF161098 BPTD_RS13390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR027417 AAA+ ATPase domain|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF123|SM00382|SSF50331|SSF52540 BPTD_RS13395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF282|SM00382|SSF50331|SSF52540 BPTD_RS13400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001034|IPR011991|IPR014036|IPR018356 DeoR C-terminal sensor domain|DeoR-type HTH domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.750.70|PF00455|PF08220|PR00037|PS00894|PTHR30363|PTHR30363:SF1|SM00420|SM01134|SSF100950|SSF46785 BPTD_RS13405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000447|IPR006076|IPR023753|IPR031656 Alpha-glycerophosphate oxidase, C-terminal|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|FAD/NAD(P)-binding domain GO:0004368|GO:0006072|GO:0009331|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PF16901|PR01001|PS00978|PTHR11985|SSF51905 BPTD_RS13410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS13415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24321|PTHR24321:SF6|SSF51735 BPTD_RS13420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS13425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00368|PTHR11632|PTHR11632:SF6|SSF51905|SSF56425 BPTD_RS13430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|PTHR21240|SSF51556 BPTD_RS13435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF97|SSF52317 BPTD_RS13440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008551 Transport and Golgi organisation protein 2 PF05742|PTHR17985 BPTD_RS13445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013784|IPR014766 Carbohydrate-binding-like fold|Carboxypeptidase, regulatory domain GO:0030246 G3DSA:2.60.40.1120|SSF49452 BPTD_RS13450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS13455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PTHR12128|PTHR12128:SF33|SM01130|SSF51569 BPTD_RS13460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PTHR30136|SSF46785|SSF55781 BPTD_RS13465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001129|IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein G3DSA:1.20.120.550|PF01124|PTHR35371|PTHR35371:SF1|SSF161084 BPTD_RS13470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014509 Uncharacterised conserved protein UCP020606 PF09997|PIRSF020606 BPTD_RS13475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 G3DSA:3.30.160.200|PF00472|PS00745|PTHR11075|SSF75620 BPTD_RS13480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR024924|IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type|7-carboxy-7-deazaguanine synthase-like GO:0008616|GO:0046872 G3DSA:3.80.30.10|MF_00917|PIRSF000370|PTHR11228|PTHR11228:SF6|SSF102114|TIGR04508 BPTD_RS13485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein G3DSA:3.30.479.10|PF01242|PTHR12589|SSF55620|TIGR03367 BPTD_RS13490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026|PTHR33376|PTHR33376:SF5 BPTD_RS13495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|PTHR10672|PTHR10672:SF17|SM01007|SSF53639 BPTD_RS13500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|PTHR10245|PTHR10245:SF9|SM00530|SSF47413|SSF51182 BPTD_RS13505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|PTHR33164|SM00347|SSF46785 BPTD_RS13510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632|PTHR30509|PTHR30509:SF1 BPTD_RS13515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008638|IPR010069|IPR011050|IPR012334|IPR025157 Filamentous haemagglutinin, 20-residue x2 repeat|Filamentous haemagglutinin, N-terminal|Haemagluttinin repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|PF13332|PTHR32093|SM00912|SSF51126|TIGR01731|TIGR01901 BPTD_RS13525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010073|IPR010918|IPR016188|IPR029062 AIR synthase-related protein, C-terminal domain|Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase|PurM-like, N-terminal domain GO:0004642|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.40.50.880|MF_00419|PF02769|PF13507|PTHR10099|PTHR10099:SF5|SM01211|SSF109736|SSF52317|SSF55326|SSF56042|SSF82697|TIGR01735 BPTD_RS13530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011 BPTD_RS13535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF2|TIGR00786 BPTD_RS13540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|PTHR33376|SSF53850|TIGR00787 BPTD_RS13545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000259|IPR008966 Adhesion domain|Fimbrial-type adhesion domain GO:0007155|GO:0009289 G3DSA:2.60.40.1090|PF16970|PTHR33420|SSF49401 BPTD_RS13555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR011880|IPR028154 AMP-dependent ligase, C-terminal|AMP-dependent synthetase/ligase|Phenylacetate-CoA ligase GO:0003824|GO:0008152|GO:0010124|GO:0047475 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF14535|PIRSF006444|PTHR24095|PTHR24095:SF175|SSF56801|TIGR02155 BPTD_RS13560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003736|IPR006683|IPR011973|IPR029069 HotDog domain|Phenylacetic acid degradation protein PaaD|Phenylacetic acid degradation-related domain|Thioesterase domain GO:0016790 G3DSA:3.10.129.10|PF03061|PTHR12418|PTHR12418:SF24|SSF54637|TIGR00369|TIGR02286 BPTD_RS13565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR011968|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0003824|GO:0008152|GO:0010124 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF76|SSF52096|TIGR02280 BPTD_RS13570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011975|IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|Phenylacetic acid degradation protein PaaN2 GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PTHR11699|PTHR11699:SF165|SSF53720|TIGR02288 BPTD_RS13575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR001433|IPR001709|IPR001834|IPR006058|IPR008333|IPR011884|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenylacetate-CoA oxygenase/reductase, PaaK subunit|Riboflavin synthase-like beta-barrel GO:0009055|GO:0010124|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00406|PS00197|PTHR19370|PTHR19370:SF93|SSF52343|SSF54292|SSF63380|TIGR02160 BPTD_RS13585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002744|IPR011883 Domain of unknown function DUF59|Phenylacetate-CoA oxygenase, PaaJ subunit PF01883|SSF117916|TIGR02159 BPTD_RS13590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007814|IPR009078|IPR011882|IPR012347 1,2-phenylacetyl-CoA epoxidase, subunit A/C|1,2-phenylacetyl-CoA epoxidase, subunit C|Ferritin-like superfamily|Ferritin-related GO:0010124 G3DSA:1.20.1260.10|PF05138|PIRSF037834|PTHR30458|PTHR30458:SF1|SSF47240|TIGR02158 BPTD_RS13595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009359 Phenylacetic acid degradation B PF06243|PIRSF030200|TIGR02157 BPTD_RS13600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007814|IPR009078|IPR011881|IPR012347 1,2-phenylacetyl-CoA epoxidase, subunit A|1,2-phenylacetyl-CoA epoxidase, subunit A/C|Ferritin-like superfamily|Ferritin-related GO:0010124|GO:0097266 G3DSA:1.20.1260.10|PF05138|PTHR30458|PTHR30458:SF0|SSF47240|TIGR02156 BPTD_RS13605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011965|IPR012906|IPR013225 PaaX-like, C-terminal|PaaX-like, N-terminal|Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 PF07848|PF08223|PIRSF020623|PTHR30319|PTHR30319:SF1|TIGR02277 BPTD_RS13610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004443 YjeF N-terminal domain G3DSA:3.40.50.10260|MF_01966|PF03853|PTHR12592|PTHR12592:SF0|SSF64153|TIGR00197 BPTD_RS13615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012337|IPR013520|IPR022894 Exonuclease, RNase T/DNA polymerase III|Oligoribonuclease|Ribonuclease H-like domain GO:0003676|GO:0016788 G3DSA:3.30.420.10|MF_00045|PF00929|PTHR11046|PTHR11046:SF1|SM00479|SSF53098 BPTD_RS13620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001915|IPR027057|IPR032456 CAAX prenyl protease 1|CAAX prenyl protease 1, N-terminal|Peptidase M48 GO:0004222|GO:0006508|GO:0008233|GO:0071586 G3DSA:3.30.2010.10|PF01435|PF16491|PTHR10120|PTHR10120:SF24 BPTD_RS13625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004881|IPR010914|IPR012340|IPR027417 Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA, putative|RsgA type GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01820|PF03193|PTHR32120|SSF50249|SSF52540|TIGR00157 BPTD_RS13630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF10|SSF161098 BPTD_RS13635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS13640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF14|SSF53850 BPTD_RS13645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF8|SSF56235|TIGR00066 BPTD_RS13650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850 BPTD_RS13670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004260|IPR021143|IPR024796 Pyrimidine dimer DNA glycosylase|Pyrimidine dimer DNA glycosylase, endonuclease V type|T4 endonuclease V G3DSA:1.10.440.10|PD021350|PF03013|PIRSF001000|SSF47077 BPTD_RS13675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|PTHR30115|PTHR30115:SF12|SM00938|SSF54913 BPTD_RS13680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003010|IPR003694|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|PTHR23090|SSF52402|SSF56317|TIGR00552 BPTD_RS13685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006685|IPR010920|IPR030192 LSM domain|Mechanosensitive ion channel MscS|Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016020|GO:0016021|GO:0055085|GO:0071470 G3DSA:2.30.30.60|PF00924|PTHR30414|PTHR30414:SF0|SSF50182 BPTD_RS13690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF3|SSF48557|TIGR00838 BPTD_RS13695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000415|IPR026021|IPR029479 Nitroreductase|Nitroreductase-like|Putative NAD(P)H nitroreductase YdjA-like GO:0016491 G3DSA:3.40.109.10|PF00881|PIRSF000232|PTHR23026|PTHR23026:SF107|SSF55469 BPTD_RS13700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR011991|IPR024370 PBP domain|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF12727|PTHR38431|SSF46785|SSF53850 BPTD_RS13710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13394|PS01305|PTHR22960|SM00729|SSF102114|TIGR02666 BPTD_RS13715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001453|IPR005110|IPR005111|IPR008284 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PS01079|PTHR10192|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 BPTD_RS13720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001453|IPR012245|IPR013484 MoaB/Mog domain|Molybdenum cofactor biosynthesis protein B, proteobacteria|Molybdenum cofactor biosynthesis protein MoaB GO:0006777 G3DSA:3.40.980.10|PF00994|PIRSF006443|PTHR10192|PTHR10192:SF18|SM00852|SSF53218|TIGR00177|TIGR02667 BPTD_RS13725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 G3DSA:3.90.1170.40|PF02391|PTHR23404|PTHR23404:SF2|SSF54690 BPTD_RS13730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR33359|SSF54285 BPTD_RS13735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002820|IPR023045|IPR023046 Molybdenum cofactor biosynthesis C|Molybdenum cofactor biosynthesis C, bacterial-type|Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|PTHR22960|SSF55040|TIGR00581 BPTD_RS13740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006665|IPR008023 OmpA-like domain|Protein of unknown function DUF748 G3DSA:3.30.1330.60|PF05359|SSF103088 BPTD_RS13745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|PTHR17630|PTHR17630:SF42|SSF53474 BPTD_RS13755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|PTHR10430|PTHR10430:SF16|SSF52833 BPTD_RS13760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23521|PTHR23521:SF2|SSF103473 BPTD_RS13765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF103481 BPTD_RS13770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|PTHR22976|PTHR22976:SF1|SM00729|SM00876|SSF102114|TIGR00433 BPTD_RS13775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025421 Protein of unknown function DUF4148 PF13663 BPTD_RS13780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16925|PTHR30055|PTHR30055:SF68|SSF46689|SSF48498 BPTD_RS13785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS13790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001757|IPR006121|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PR00941|PS00154|PTHR24093|PTHR24093:SF317|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 BPTD_RS13795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000551|IPR009061|IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator|MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0003700|GO:0006355|GO:0045893|GO:0046872 G3DSA:1.10.1660.10|PF13411|PR00040|PTHR30204|PTHR30204:SF18|SM00422|SSF46955|TIGR02047 BPTD_RS13800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002508|IPR007709|IPR010247 Cell wall hydrolase/autolysin, catalytic|N-formylglutamate amidohydrolase|N-formylglutamate deformylase GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF05013|SSF53187|TIGR02017 BPTD_RS13810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24319|PTHR24319:SF23|SSF51735 BPTD_RS13815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104|PTHR23427|PTHR23427:SF6 BPTD_RS13820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005171|IPR014210 Cytochrome C oxidase subunit IV, prokaryotes|Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PF03626|PTHR36835|TIGR02847 BPTD_RS13825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000298|IPR013833|IPR014206|IPR024791 Cytochrome c oxidase subunit III|Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle|Cytochrome o ubiquinol oxidase, subunit III GO:0004129|GO:0005886|GO:0008827|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.20.120.80|PF00510|PTHR11403|PTHR11403:SF2|SSF81452|TIGR02842 BPTD_RS13830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000883|IPR014207|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome o ubiquinol oxidase, subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0016682|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PTHR10422|PTHR10422:SF26|SSF81442|TIGR02843 BPTD_RS13840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00216|PTHR23508|PTHR23508:SF16|SSF103473 BPTD_RS13845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007475 Membrane fusogenic activity PF04380 BPTD_RS13860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002187|IPR002332|IPR011322|IPR015867 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PTHR30115|PTHR30115:SF12|SM00938|SSF54913 BPTD_RS13870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR003992|IPR004899|IPR005546|IPR006315|IPR011050|IPR012332 Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin|Pertactin virulence factor family|Pertactin, central region GO:0007155|GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03212|PF03797|PR01482|PR01484|PTHR12338|SM00869|SSF103515|SSF51126|TIGR01414 BPTD_RS13880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|PTHR30055:SF47|SSF46689|SSF48498 BPTD_RS13885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF137|SSF103473 BPTD_RS13890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030660 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|High-affinity branched-chain amino acid transport ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015658|GO:0015803|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039137|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS13895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS13900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF10 BPTD_RS13905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF371 BPTD_RS13910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF20|SSF53822 BPTD_RS13915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002872|IPR005933|IPR010985|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR024082|IPR024089|IPR024090|IPR025703|IPR029041 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Bifunctional protein PutA|Delta-1-pyrroline-5-carboxylate dehydrogenase 3|FAD-linked oxidoreductase-like|Proline dehydrogenase PutA, domain I|Proline dehydrogenase PutA, domain I/II|Proline dehydrogenase PutA, domain II|Proline dehydrogenase domain|Ribbon-helix-helix GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0006561|GO:0008152|GO:0010133|GO:0016491|GO:0016620|GO:0055114 G3DSA:1.10.2060.10|G3DSA:1.20.5.550|G3DSA:3.20.20.220|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01619|PF14850|PIRSF000197|PS00070|PTHR11699|PTHR11699:SF18|SSF47598|SSF51730|SSF53720|SSF81935|TIGR01238 BPTD_RS13925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 BPTD_RS13930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003399 Mce/MlaD PF02470|PTHR30462|PTHR30462:SF2 BPTD_RS13935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005219|IPR007498 Conserved hypothetical protein CHP00155|Paraquat-inducible protein A PF04403|PTHR30462|PTHR30462:SF3|TIGR00155 BPTD_RS13940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR013461|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0004176|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF111|SM00382|SM01086|SSF52540|SSF81923|TIGR02639 BPTD_RS13945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001264|IPR001460|IPR009647|IPR011815|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein 1C|Penicillin-binding protein, transpeptidase|Penicillin-binding, C-terminal GO:0008658|GO:0008955|GO:0009252 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF06832|PTHR32282|PTHR32282:SF0|SSF53955|SSF56601|TIGR02073 BPTD_RS13950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001599|IPR002890|IPR008930|IPR011625|IPR011626|IPR019565|IPR021868|IPR026284 Alpha-2-macroglobulin|Alpha-2-macroglobulin MG1 domain|Alpha-2-macroglobulin domain protein, bacteria|Alpha-2-macroglobulin, N-terminal|Alpha-2-macroglobulin, N-terminal 2|Alpha-2-macroglobulin, thiol-ester bond-forming|Alpha-macroglobulin complement component|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0004866|GO:0005615 G3DSA:1.50.10.20|PF00207|PF01835|PF07678|PF07703|PF10569|PF11974|PIRSF038980|PTHR11412|PTHR11412:SF104|SM01359|SM01360|SSF48239 BPTD_RS13955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|PTHR33473|SSF54736 BPTD_RS13960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 BPTD_RS13965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003795 Protein of unknown function DUF192 PF02643|PTHR37953|PTHR37953:SF1 BPTD_RS13970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR012793|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Beta-ketoadipyl CoA thiolase|Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747|GO:0019619 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF91|SSF53901|TIGR01930|TIGR02430 BPTD_RS13975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|PTHR11689|SSF81340 BPTD_RS13980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|PTHR11404|PTHR11404:SF8|SSF46609|SSF54719 BPTD_RS13985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|PTHR30008|PTHR30008:SF0|TIGR00237 BPTD_RS13990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS13995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625 BPTD_RS14000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF5 BPTD_RS14005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 G3DSA:3.40.50.300|MF_00409|PF02606|PTHR30160|PTHR30160:SF13|SSF52540|TIGR00682 BPTD_RS14010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005651 Uncharacterised protein family UPF0434/Trm112 G3DSA:2.20.25.10|MF_01187|PF03966|PTHR33505|SSF158997 BPTD_RS14015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|PTHR21485|PTHR21485:SF4|SSF53448|TIGR00466 BPTD_RS14020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000850|IPR006259|IPR007862|IPR027417 Adenylate kinase subfamily|Adenylate kinase, active site lid domain|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PF05191|PR00094|PS00113|PTHR23359|SSF52540|TIGR01351 BPTD_RS14025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF356|SM00822|SSF51735 BPTD_RS14030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023|PIRSF002869|PR01806|PTHR11206|PTHR11206:SF90|TIGR01695 BPTD_RS14035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006860|IPR012373|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal PF04773|PF16220|PIRSF018266|PTHR30273|PTHR30273:SF3 BPTD_RS14040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|PTHR33398|SSF46992|TIGR00029 BPTD_RS14045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005000|IPR015813|IPR017648 5-keto-4-deoxy-D-glucarate aldolase|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008672|GO:0019394 G3DSA:3.20.20.60|PF03328|PTHR30502|PTHR30502:SF4|SSF51621|TIGR03239 BPTD_RS14055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PTHR30349|PTHR30349:SF32 BPTD_RS14070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|PTHR11091|SSF89733 BPTD_RS14075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010305|IPR010920 LSM domain|Protein of unknown function DUF903 G3DSA:2.30.30.100|PF06004|PTHR37011|PTHR37011:SF1|SSF50182 BPTD_RS14085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001926|IPR004450|IPR029144 Threonine synthase, N-terminal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|G3DSA:3.90.1380.10|PF00291|PF14821|PTHR10314|PTHR10314:SF1|SSF53686|TIGR00260 BPTD_RS14090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001342|IPR002912|IPR005106|IPR016040|IPR016204|IPR019811 ACT domain|Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0008152|GO:0016491|GO:0016597|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF01842|PF03447|PIRSF000098|PS01042|PTHR21499|PTHR21499:SF2|SSF51735|SSF55021|SSF55347 BPTD_RS14095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF302|SSF53383 BPTD_RS14100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007523 NDUFAF3/Mth938 domain-containing protein G3DSA:3.40.1230.10|PF04430|PTHR21192|SSF64076 BPTD_RS14105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|SSF52833 BPTD_RS14110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002716|IPR003714|IPR027417|IPR029060 P-loop containing nucleoside triphosphate hydrolase|PIN domain|PIN domain-like|PhoH-like protein GO:0005524 G3DSA:3.40.50.1010|G3DSA:3.40.50.300|PF02562|PF13638|PTHR30473|PTHR30473:SF2|SM00670|SSF52540|SSF88723 BPTD_RS14115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|PTHR30004|PTHR30004:SF6|SSF53659|TIGR00557 BPTD_RS14120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016833 Putative sodium bile acid cotransporter PF13593|PIRSF026166|PTHR18640|PTHR18640:SF9 BPTD_RS14125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PTHR30153|SM00382|SSF48024|SSF52540|TIGR00665 BPTD_RS14130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011009 Protein kinase-like domain SSF56112 BPTD_RS14135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000244|IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9|Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|PTHR21368|SSF55653|SSF55658|TIGR00158 BPTD_RS14140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001648|IPR018275 Ribosomal protein S18|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|PTHR13479|SSF46911|TIGR00165 BPTD_RS14145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012340|IPR023646 Nucleic acid-binding, OB-fold|Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 G3DSA:2.40.50.140|MF_00720|PIRSF003135|SSF50249|TIGR04418 BPTD_RS14150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|PTHR21011|PTHR21011:SF1|SSF54995|TIGR00166 BPTD_RS14155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003801|IPR022838 GTP cyclohydrolase FolE2|GTP cyclohydrolase FolE2/MptA GO:0003933|GO:0003934|GO:0035998 G3DSA:3.10.270.10|MF_01527_B|PF02649|PTHR36445|PTHR36445:SF1 BPTD_RS14160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204 BPTD_RS14165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF23|SSF48576 BPTD_RS14170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|PIRSF006488|PTHR34137|SSF116842|TIGR01280 BPTD_RS14175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF4|SM00346|SSF46785|SSF55781 BPTD_RS14180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS14185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BPTD_RS14190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PTHR21266|PTHR21266:SF2|SSF50022|SSF55961 BPTD_RS14195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|PTHR11911|PTHR11911:SF99|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 BPTD_RS14205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR11049|PTHR11049:SF5|SSF54637 BPTD_RS14210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004630|IPR018383 Uncharacterised protein family UPF0324, bacteria|Uncharacterised protein family UPF0324, prokaryote GO:0016021 PF03601|PTHR30106|PTHR30106:SF2|TIGR00698 BPTD_RS14215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF11|SSF46785|SSF53850 BPTD_RS14220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 BPTD_RS14225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801 BPTD_RS14230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|PTHR20854|PTHR20854:SF4|SSF56655 BPTD_RS14245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000322|IPR011013|IPR017853 Galactose mutarotase-like domain|Glycoside hydrolase family 31|Glycoside hydrolase superfamily GO:0003824|GO:0004553|GO:0005975|GO:0030246 PF01055|PTHR22762|PTHR22762:SF38|SSF51011|SSF51445|SSF74650 BPTD_RS14250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR018449|IPR026253|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Methionine import ATP-binding protein MetN|NIL domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015821|GO:0016887|GO:0042626 G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00005|PF09383|PS00211|PTHR24220|PTHR24220:SF455|SM00382|SM00930|SSF52540|SSF55021 BPTD_RS14255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30450|PTHR30450:SF1|SSF161098 BPTD_RS14260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|PTHR30429|SSF53850|TIGR00363 BPTD_RS14270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00913|PTHR11496|PTHR11496:SF68|SSF56796 BPTD_RS14280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|PTHR33336|PTHR33336:SF5|SSF54909 BPTD_RS14290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002840|IPR008279|IPR012016|IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel|Domain of unknown function DUF126|PEP-utilising enzyme, mobile domain|Uncharacterised protein family UPF0107 GO:0016310|GO:0016772 G3DSA:3.50.30.10|PF01989|PIRSF004966|PTHR36577|SSF52016 BPTD_RS14295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007506 Domain of unknown function DUF521 PF04412|PTHR36577|PTHR36577:SF1 BPTD_RS14300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS14305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS14315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS14320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|SSF103378 BPTD_RS14325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF2|SSF161098 BPTD_RS14330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR32243|PTHR32243:SF18|SSF161098 BPTD_RS14335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR008995|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF151|SM00382|SSF50331|SSF52540 BPTD_RS14340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF12831|PTHR22912|PTHR22912:SF29|SSF51905 BPTD_RS14345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:3.40.190.10|PF13416|PTHR30061|SSF53850 BPTD_RS14355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011991|IPR029016 GAF domain-like|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.450.40|SSF46785|SSF55781 BPTD_RS14365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000551|IPR009061|IPR010211|IPR015358 MerR-type HTH domain|Putative DNA-binding domain|Redox-sensitive transcriptional activator SoxR|Transcription regulator MerR, DNA binding GO:0003677|GO:0006355|GO:0006979|GO:0051537 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PS00552|PTHR30204|PTHR30204:SF0|SM00422|SSF46955|TIGR01950 BPTD_RS14370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005019|IPR011257 DNA glycosylase|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|PTHR30037|PTHR30037:SF4|SSF48150 BPTD_RS14375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007844 AsmA PF05170|PTHR30441|PTHR30441:SF2 BPTD_RS14380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PS01081|PTHR30055|PTHR30055:SF34|SSF46689|SSF48498 BPTD_RS14385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|SM00822|SSF51735 BPTD_RS14395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:2.20.110.10 BPTD_RS14405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30126|PTHR30126:SF2|SSF46785|SSF53850 BPTD_RS14430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|PTHR20881|SSF51621|TIGR00222 BPTD_RS14435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001702|IPR002299|IPR023614 Porin domain|Porin, Gram-negative type|Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 G3DSA:2.40.160.10|PF13609|PR00182|PR00184|SSF56935 BPTD_RS14440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF242|SSF51735 BPTD_RS14450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24321|PTHR24321:SF6|SM00822|SSF51735 BPTD_RS14455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23508|SSF103473 BPTD_RS14460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PTHR17630|PTHR17630:SF50|SSF53474 BPTD_RS14465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|SSF46785|SSF53850 BPTD_RS14470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000796|IPR004839|IPR015421|IPR015424 Aminotransferase, class I/classII|Aspartate/other aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0006520|GO:0008483|GO:0009058|GO:0030170 G3DSA:3.40.640.10|PF00155|PR00799|PTHR11879|PTHR11879:SF7|SSF53383 BPTD_RS14475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|PTHR33594|PTHR33594:SF1|SM00471|SSF109604 BPTD_RS14480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001757|IPR006121|IPR006122|IPR008250|IPR017969|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy metal-associated domain, copper ion-binding|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0005507|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00943|PS00154|PS01047|PTHR24093|SSF55008|SSF56784|SSF81653|SSF81665|TIGR00003|TIGR01494|TIGR01511|TIGR01525 BPTD_RS14485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|PTHR40943|SSF51182 BPTD_RS14495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025870|IPR029068 Glyoxalase-like domain|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13468|SSF54593 BPTD_RS14500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR002364|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS01162|PTHR11695|SM00829|SSF50129|SSF51735 BPTD_RS14505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR12418|SSF54637|TIGR00369 BPTD_RS14515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 BPTD_RS14520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|SSF161098 BPTD_RS14525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021259 Protein of unknown function DUF2817 G3DSA:3.40.630.10|PF10994|SSF53187 BPTD_RS14530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801 BPTD_RS14535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010300|IPR011051|IPR014710 Cysteine dioxygenase type I|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0005506|GO:0016702|GO:0055114 G3DSA:2.60.120.10|PF05995|SSF51182 BPTD_RS14540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PTHR30154|PTHR30154:SF17|SM00344|SSF46785|SSF54909 BPTD_RS14545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS14550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|PTHR21098|PTHR21098:SF4|SSF63380|TIGR00187 BPTD_RS14555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|SSF75304 BPTD_RS14560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF26|SSF46785|SSF53850 BPTD_RS14575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23523|PTHR23523:SF1|SSF103473 BPTD_RS14580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002125|IPR016193 Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270 G3DSA:3.40.140.10|PF00383|PTHR11079|PTHR11079:SF25|SSF53927 BPTD_RS14585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24198|SM00248|SSF48403 BPTD_RS14590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 BPTD_RS14595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PTHR22893|PTHR22893:SF7|SSF51395 BPTD_RS14600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS14605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS14610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF10 BPTD_RS14615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF371 BPTD_RS14620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|SSF55298 BPTD_RS14625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 BPTD_RS14635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS14640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24322|PTHR24322:SF602|SSF51735 BPTD_RS14645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR10587|PTHR10587:SF72|SSF88713 BPTD_RS14650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF457|SM00382|SSF52540 BPTD_RS14655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF12|SSF161098 BPTD_RS14660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BPTD_RS14665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF53850 BPTD_RS14670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096 BPTD_RS14675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS14680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site GO:0016884 G3DSA:3.90.1300.10|PF01425|PS00571|PTHR11895|SSF75304 BPTD_RS14685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS14690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF13 BPTD_RS14700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021413 Protein of unknown function DUF3053 PF11254 BPTD_RS14710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|SSF81342 BPTD_RS14715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002321|IPR010980|IPR012127|IPR015984 Cytochrome c prime|Cytochrome c prime, subgroup|Cytochrome c, class II|Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 G3DSA:1.20.120.10|PF01322|PIRSF000027|PR00608|SSF47175 BPTD_RS14720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000362|IPR004769|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase PurB, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0006188|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|PTHR11444|PTHR11444:SF17|SSF48557|TIGR00928 BPTD_RS14725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|PTHR11260|PTHR11260:SF256|SSF47616|SSF52833 BPTD_RS14730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF18 BPTD_RS14735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|PTHR11933|PTHR11933:SF10|SSF52402|TIGR00420 BPTD_RS14740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF15|SSF46785|SSF53850 BPTD_RS14745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS14750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002508|IPR007709 Cell wall hydrolase/autolysin, catalytic|N-formylglutamate amidohydrolase GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF05013|SSF53187 BPTD_RS14755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007698|IPR007886|IPR008143|IPR016040 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.40.50.720|PF01262|PF05222|PS00837|PTHR10160|SM01002|SM01003|SSF51735|SSF52283 BPTD_RS14765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|PTHR11019|PTHR11019:SF61|SM00342|SSF46689 BPTD_RS14770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|PTHR30069|PTHR30069:SF8|SSF56935|TIGR01783 BPTD_RS14775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000801|IPR029058 Alpha/Beta hydrolase fold|Putative esterase G3DSA:3.40.50.1820|PF00756|PTHR40841|PTHR40841:SF2|SSF53474 BPTD_RS14780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004017|IPR009051|IPR012257|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain|Glycolate oxidase, iron-sulphur subunit GO:0051536 G3DSA:1.10.1060.10|PF02754|PF13183|PIRSF000139|PS00198|PTHR32479|PTHR32479:SF2|SSF46548 BPTD_RS14785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006094|IPR016164|IPR016166|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.465.10|PF01565|PTHR11748|PTHR11748:SF1|SSF55103|SSF56176 BPTD_RS14790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PTHR11748|PTHR11748:SF78|SSF55103|SSF56176 BPTD_RS14795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PTHR11748|PTHR11748:SF97|SSF55103|SSF56176 BPTD_RS14800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008638|IPR011050|IPR012334|IPR020974|IPR025157 CGT/MARTX, cysteine protease (CPD) domain|Filamentous haemagglutinin, N-terminal|Haemagluttinin repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|PF11713|PF13332|SM00912|SSF51126|TIGR01901 BPTD_RS14805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|PTHR21225|PTHR21225:SF7|SSF51569|TIGR00034 BPTD_RS14810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002510|IPR025502 Metalloprotease TldD/PmbA|TldD GO:0006508|GO:0008237 PF01523|PIRSF004919|PTHR30624|PTHR30624:SF4|SSF111283 BPTD_RS14815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001110|IPR003010 Carbon-nitrogen hydrolase|Uncharacterised protein family UPF0012, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS01227|PTHR23088|PTHR23088:SF27|SSF56317 BPTD_RS14820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001801|IPR027444 Histone-like protein H-NS|Histone-like protein H-NS, C-terminal domain GO:0003677|GO:0005622|GO:0006355 G3DSA:4.10.430.10|PF00816|SM00528|SSF81273 BPTD_RS14825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS14835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF6|SSF88659|SSF88946|TIGR02937 BPTD_RS14840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005297|IPR014558 Lipoprotein repeat|Uncharacterised conserved lipoprotein PF03640|PIRSF029720|PTHR39335 BPTD_RS14845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007551 Protein of unknown function DUF520 G3DSA:3.30.70.860|G3DSA:3.30.70.990|MF_00632|PF04461|PTHR30476|PTHR30476:SF0|SSF89963 BPTD_RS14850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008457 Copper resistance protein D GO:0016021 PF05425 BPTD_RS14855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PTHR36503|PTHR36503:SF2|SSF54593 BPTD_RS14860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011055|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|PTHR21666|SM00257|SSF51261 BPTD_RS14865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003370|IPR014047 Chromate transporter|Chromate transporter, long chain GO:0015109|GO:0015703 PF02417|PIRSF004810|PTHR33567|PTHR33567:SF3|TIGR00937 BPTD_RS14870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005625 PepSY-associated TM protein PF03929 BPTD_RS14875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF10|SSF56935 BPTD_RS14880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021333 Protein of unknown function DUF2946 PF11162 BPTD_RS14885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018740 Protein of unknown function DUF2282, integral membrane PF10048 BPTD_RS14890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007801|IPR013022 Uncharacterised protein family UPF0276|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|MF_00697|PF05114|PTHR42194|PTHR42194:SF1|SSF51658 BPTD_RS14895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018640 Putative DNA-binding domain, bacteria PF09836 BPTD_RS14900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032808 DoxX family PF07681 BPTD_RS14905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF76|SSF103473 BPTD_RS14910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|PTHR33154:SF2|SM00418|SSF46785 BPTD_RS14915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005171|IPR014210 Cytochrome C oxidase subunit IV, prokaryotes|Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PF03626|PTHR36835|TIGR02847 BPTD_RS14920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000298|IPR013833|IPR014206|IPR024791 Cytochrome c oxidase subunit III|Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle|Cytochrome o ubiquinol oxidase, subunit III GO:0004129|GO:0005886|GO:0008827|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.20.120.80|PF00510|PTHR11403|PTHR11403:SF2|SSF81452|TIGR02842 BPTD_RS14925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000883|IPR014207|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome o ubiquinol oxidase, subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0016682|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PTHR10422|PTHR10422:SF26|SSF81442|TIGR02843 BPTD_RS14930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002429|IPR006333|IPR008972|IPR010514|IPR011759 COX aromatic rich motif|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome o ubiquinol oxidase subunit II GO:0004129|GO:0005507|GO:0008827|GO:0016020|GO:0016021|GO:0016682|GO:0022900|GO:0055114 G3DSA:1.10.287.90|G3DSA:2.60.40.420|PF00116|PF06481|PIRSF000292|PTHR22888|PTHR22888:SF13|SSF49503|SSF81464|TIGR01433 BPTD_RS14935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR002197|IPR009057|IPR011006 CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PF02954|PR01590|PTHR26402|PTHR26402:SF344|SM00448|SSF52172 BPTD_RS14940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|SM00387|SSF47384|SSF55874 BPTD_RS14945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13847|SSF53335 BPTD_RS14950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|PTHR13903|PTHR13903:SF12|SSF51182 BPTD_RS14960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30126|PTHR30126:SF29|SSF46785|SSF53850 BPTD_RS14965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|SSF103473 BPTD_RS14970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF591|SSF89796 BPTD_RS14975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF0|SSF46785|SSF53850 BPTD_RS14980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS14985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13452|PTHR13078|SSF54637 BPTD_RS14990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|PF02771|PTHR10909|PTHR10909:SF241|SSF56645 BPTD_RS14995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PTHR39168|PTHR39168:SF1|SM00418|SSF46785 BPTD_RS15000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002125|IPR002734|IPR004794|IPR011549|IPR016192|IPR016193|IPR024072 APOBEC/CMP deaminase, zinc-binding|Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0016787|GO:0050661|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PS00903|PTHR11079|PTHR11079:SF10|SSF53597|SSF53927|TIGR00227|TIGR00326 BPTD_RS15010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF16|SSF52499 BPTD_RS15015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF58|SSF52317 BPTD_RS15020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|PTHR30455|PTHR30455:SF2|TIGR00244 BPTD_RS15025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|PTHR11680|PTHR11680:SF9|SSF53383 BPTD_RS15030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005247|IPR008914 Phosphatidylethanolamine-binding protein|YbhB/YbcL G3DSA:3.90.280.10|PF01161|PTHR30289|SSF49777|TIGR00481 BPTD_RS15035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024088|IPR024108 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type|Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02007|PF00579|PF01479|PR01040|PS00178|PTHR11766|PTHR11766:SF1|SM00363|SSF52374|SSF55174|TIGR00234 BPTD_RS15040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|PTHR21666:SF221|SSF51261 BPTD_RS15050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 G3DSA:3.30.420.40|MF_01270|PF03702|PTHR30605|PTHR30605:SF0|SSF53067 BPTD_RS15055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000361|IPR016092|IPR017870|IPR023063 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion protein ErpA|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|MF_01380|PF01521|PS01152|PTHR10072|SSF89360|TIGR00049 BPTD_RS15065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000534|IPR000706|IPR012280|IPR016040|IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|PTHR32338|PTHR32338:SF8|SM00859|SSF51735|SSF55347|TIGR01850 BPTD_RS15070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|PTHR21569|SSF54211 BPTD_RS15075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005822|IPR005823|IPR023564 Ribosomal protein L13|Ribosomal protein L13 domain|Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PTHR11545|SSF52161|TIGR01066 BPTD_RS15080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026|PTHR33376|PTHR33376:SF5 BPTD_RS15085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PF01523|PTHR30624|PTHR30624:SF1|SSF111283 BPTD_RS15090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006839|IPR023153 PSPTO4464-like domain|Ribosome-associated, YjgA G3DSA:1.10.60.30|MF_00765|PF04751|PIRSF016183|PTHR38101|PTHR38101:SF1|SSF158710 BPTD_RS15095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|PTHR10655|PTHR10655:SF17|SSF53474 BPTD_RS15105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 BPTD_RS15110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF19|SSF161098 BPTD_RS15115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|SSF52499 BPTD_RS15120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR36437|PTHR36437:SF1|SSF54593 BPTD_RS15125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|DbpA, RNA-binding domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PS00039|PTHR24031|PTHR24031:SF180|SM00487|SM00490|SSF52540 BPTD_RS15135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS15140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016102|IPR016181|IPR032875 Acyl-CoA N-acyltransferase|GNAT domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0008080 G3DSA:3.40.50.261|G3DSA:3.40.630.30|PF00583|PF13549|PF13607|PTHR11117|PTHR11117:SF8|SSF52210|SSF55729 BPTD_RS15150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|PTHR11451|PTHR11451:SF41|SSF48163|SSF52374|TIGR00464 BPTD_RS15155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|SSF103473 BPTD_RS15165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|PTHR30154|PTHR30154:SF28|SM00344|SSF46785|SSF54909 BPTD_RS15175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002869|IPR011766|IPR019752|IPR029061 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0016491|GO:0016903|GO:0030976|GO:0055114 G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF02775|PTHR18968|PTHR18968:SF134|SSF52518|SSF53323 BPTD_RS15180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000788|IPR005144|IPR008926|IPR013346|IPR013509 ATP-cone domain|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class I , alpha subunit GO:0004748|GO:0005524|GO:0006260|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PF03477|PR01183|PS00089|PTHR11573|SSF48168|SSF51998|TIGR02506 BPTD_RS15185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000358|IPR009078|IPR012348 Ferritin-like superfamily|Ribonucleotide reductase small subunit|Ribonucleotide reductase-related GO:0009186|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|PIRSF000355|PTHR23409|PTHR23409:SF18|SSF47240 BPTD_RS15190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 PF07382 BPTD_RS15195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325|PTHR33219|PTHR33219:SF5 BPTD_RS15200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24095|SSF56801 BPTD_RS15205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004299|IPR024024|IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT PF03062|PIRSF016636|PIRSF500216|PTHR13285 BPTD_RS15215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006998 DltD, C-terminal PF04914|PTHR40039|PTHR40039:SF1 BPTD_RS15220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 BPTD_RS15225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008816 Glycine zipper 2TM domain GO:0019867 PF05433|PTHR35603 BPTD_RS15230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00583|PTHR10584|PTHR10584:SF15|SSF53613 BPTD_RS15235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011723|IPR021834 Protein of unknown function DUF3426|Zinc finger/thioredoxin putative PF11906|PF13719|TIGR02098 BPTD_RS15240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF06325|PTHR18895|PTHR18895:SF69|SSF53335 BPTD_RS15245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|PTHR18866|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 BPTD_RS15250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000089|IPR001249|IPR001882|IPR011053 Acetyl-CoA biotin carboxyl carrier|Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|PS00188|PTHR23151|SSF51230|TIGR00531 BPTD_RS15255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|PTHR21272|SSF52304|TIGR01088 BPTD_RS15260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000866|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|PTHR10681|PTHR10681:SF125|SSF52833 BPTD_RS15265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000713|IPR004101|IPR005757|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Murein peptide ligase|NAD(P)-binding domain GO:0005524|GO:0009058|GO:0009252|GO:0016874|GO:0016881|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_02020|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF17|SSF51984|SSF53244|SSF53623|TIGR01081 BPTD_RS15270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008886|IPR029058 Alpha/Beta hydrolase fold|Uncharacterised protein family UPF0227/Esterase YqiA G3DSA:3.40.50.1820|PF05728|PTHR35602|PTHR35602:SF3|SSF53474 BPTD_RS15275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012340 Nucleic acid-binding, OB-fold PF00773|PTHR23355|PTHR23355:SF5|SM00955|SSF50249 BPTD_RS15280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|SSF74653|TIGR01352 BPTD_RS15285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006151|IPR011342|IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF01488|PF08501|PTHR21089|PTHR21089:SF2|SSF51735|SSF53223|TIGR00507 BPTD_RS15295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009746|IPR011250 Antimicrobial peptide resistance/lipid A acylation PagP|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|MF_00837|PD103779|PF07017|SSF56925 BPTD_RS15300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006840|IPR013024 Butirosin biosynthesis, BtrG-like|ChaC-like protein G3DSA:3.10.490.10|PF04752|PTHR12192|PTHR12192:SF9|SSF110857 BPTD_RS15305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|PTHR30154|PTHR30154:SF17|SM00344|SSF46785|SSF54909 BPTD_RS15310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF148|SSF51905|SSF54373 BPTD_RS15315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24319|PTHR24319:SF23|SSF51735 BPTD_RS15320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010300|IPR011051|IPR014710 Cysteine dioxygenase type I|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0005506|GO:0016702|GO:0055114 G3DSA:2.60.120.10|PF05995|SSF51182 BPTD_RS15325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS15330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025870|IPR029068 Glyoxalase-like domain|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13468|SSF54593 BPTD_RS15335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|PTHR30612|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 BPTD_RS15340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 BPTD_RS15345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 BPTD_RS15350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004463|IPR011334|IPR015870|IPR020568 Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|PTHR33694|PTHR33694:SF1|SSF54211|TIGR00325 BPTD_RS15355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PTHR30314|PTHR30314:SF3|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 BPTD_RS15360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.1490.110|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|PTHR32432|PTHR32432:SF4|SM00842|SSF53067|TIGR01174 BPTD_RS15365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005548|IPR013685|IPR026579 Cell division protein FtsQ|Cell division protein FtsQ/DivIB|Polypeptide-transport-associated, FtsQ-type GO:0000917 MF_00911|PF03799|PF08478|PTHR35851|PTHR35851:SF1 BPTD_RS15370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00843|PS00844|PTHR23132|SSF52440|SSF56059|TIGR01205 BPTD_RS15375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF5|SSF51984|SSF53244|SSF53623|TIGR01082 BPTD_RS15380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|PTHR21015|PTHR21015:SF22|SSF53756|TIGR01133 BPTD_RS15385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001182|IPR013437 Cell cycle protein FtsW/RodA|Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 MF_00913|PF01098|PTHR30474|PTHR30474:SF2|TIGR02614 BPTD_RS15390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004101|IPR005762|IPR013221|IPR016040|IPR018109 Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0004326|GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0009396|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|PS01011|PTHR23135|PTHR23135:SF2|SSF51984|SSF53244|SSF53623|TIGR01087 BPTD_RS15395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PS01347|PS01348|PTHR22926|PTHR22926:SF5|TIGR00445 BPTD_RS15400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000713|IPR004101|IPR005761|IPR005863|IPR013221|IPR018109 Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0004326|GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0009396|GO:0016874|GO:0016881|GO:0047480|GO:0051301|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|MF_02019|PF01225|PF02875|PF08245|PS01011|PTHR23135|PTHR23135:SF4|SSF53244|SSF53623|SSF63418|TIGR01085|TIGR01143 BPTD_RS15405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF1|SSF56519|SSF56601 BPTD_RS15410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 MF_00910|PF04999|PTHR37479|PTHR37479:SF1|TIGR02209 BPTD_RS15415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|PTHR11265|PTHR11265:SF0|SSF53335|SSF81799|TIGR00006 BPTD_RS15420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003444|IPR020603 MraZ domain|Transcriptional regulator MraZ GO:0003700|GO:0006355 MF_01008|PD006745|PF02381|PTHR34701|SSF89447|TIGR00242 BPTD_RS15425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|PTHR19211|SM00382|SSF52540 BPTD_RS15430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002195|IPR004721|IPR006680|IPR032466 Amidohydrolase-related|Dihydroorotase homodimeric type|Dihydroorotase, conserved site|Metal-dependent hydrolase GO:0004151|GO:0016787|GO:0016812|GO:0019856 G3DSA:3.20.20.140|MF_00219|PF01979|PIRSF001237|PS00482|PS00483|PTHR11647|PTHR11647:SF59|SSF51556|TIGR00856 BPTD_RS15435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 BPTD_RS15440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003121|IPR019835 SWIB domain|SWIB/MDM2 domain GO:0005515 G3DSA:1.10.245.10|PF02201|PTHR13844|SM00151|SSF47592 BPTD_RS15475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PTHR30154|PTHR30154:SF28|SM00344|SSF46785|SSF54909 BPTD_RS15480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004360|IPR005956|IPR029068 4-hydroxyphenylpyruvate dioxygenase|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0003868|GO:0009072|GO:0016701|GO:0055114 G3DSA:3.10.180.10|PF00903|PF14696|PIRSF009283|PTHR11959|PTHR11959:SF1|SSF54593|TIGR01263 BPTD_RS15485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002569|IPR028427 Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|PTHR10173|PTHR10173:SF34|SSF55068|TIGR00401 BPTD_RS15490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002324|IPR009056 Cytochrome c, class ID|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00606|SSF46626 BPTD_RS15495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF5|SSF143975|SSF52016|TIGR00110 BPTD_RS15500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|PTHR30589|PTHR30589:SF0|TIGR00544 BPTD_RS15505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007497 Protein of unknown function DUF541 PF04402 BPTD_RS15510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007838 Cell division protein ZapA-like PF05164|PTHR34981|PTHR34981:SF1|SSF102829 BPTD_RS15525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009936 Protein of unknown function DUF1468 PF07331 BPTD_RS15535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970|PTHR35342|PTHR35342:SF2 BPTD_RS15540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF8|SSF56235 BPTD_RS15545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|PTHR22981|PTHR22981:SF49|SSF48179|SSF51735 BPTD_RS15550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|PTHR10204|PTHR10204:SF16|SSF52218 BPTD_RS15555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002043|IPR005122|IPR018085 Uracil-DNA glycosylase|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|PTHR11264|SM00986|SM00987|SSF52141|TIGR00628 BPTD_RS15565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000629|IPR001650|IPR011545|IPR012969|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Fibrinogen binding protein|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF08017|PS00039|PTHR24031|PTHR24031:SF261|SM00487|SM00490|SSF52540 BPTD_RS15570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003788|IPR029063 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF02636|PTHR12049|SSF53335 BPTD_RS15575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002646|IPR012006|IPR032828 Poly A polymerase, head domain|tRNA nucleotidyltransferase, proteobacteria|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0001680|GO:0003723|GO:0004810|GO:0005524|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_01262|PF01743|PF12627|PIRSF000813|PTHR13734|SSF81301|SSF81891 BPTD_RS15580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008258|IPR008939|IPR012289|IPR016026|IPR023346 Lysozyme-like domain|Lytic transglycosylase, superhelical U-shaped|Lytic transglycosylase, superhelical U-shaped and linker domain|Lytic transglycosylase, superhelical linker|Transglycosylase SLT domain 1 GO:0004553|GO:0042597 G3DSA:1.10.1240.20|G3DSA:1.10.530.10|G3DSA:1.25.20.10|PF01464|PF14718|PTHR21666|SSF48435|SSF53955 BPTD_RS15585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PIRSF006806|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727 BPTD_RS15590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005828|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PTHR23508|PTHR23508:SF1|SSF103473 BPTD_RS15595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|PTHR10625:SF121|SSF52768 BPTD_RS15600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850 BPTD_RS15605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003171|IPR004620|IPR029041 5,10-methylenetetrahydrofolate reductase|FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114 G3DSA:3.20.20.220|PF02219|PTHR21091|PTHR21091:SF31|SSF51730|TIGR00676 BPTD_RS15615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV PF04020|PTHR37309|PTHR37309:SF1 BPTD_RS15620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000043|IPR015878|IPR016040|IPR020082 Adenosylhomocysteinase|NAD(P)-binding domain|S-adenosyl-L-homocysteine hydrolase, NAD binding domain|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 G3DSA:3.40.50.1480|G3DSA:3.40.50.720|MF_00563|PF00670|PF05221|PIRSF001109|PS00738|PS00739|PTHR23420|SM00996|SM00997|SSF51735|SSF52283|TIGR00936 BPTD_RS15625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13439|PF13692|PTHR12526|PTHR12526:SF363|SSF53756 BPTD_RS15630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010710 Protein of unknown function DUF1289 PF06945|PTHR35175 BPTD_RS15635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|PTHR11964|SSF55973|TIGR01034 BPTD_RS15640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF026649|PTHR30606 BPTD_RS15645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF026649|PTHR30606|PTHR30606:SF5 BPTD_RS15650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|PTHR31689|PTHR31689:SF0|SSF54506|TIGR00652 BPTD_RS15655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007435 Protein of unknown function DUF484 PF04340|PTHR38765 BPTD_RS15660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002104|IPR004107|IPR011010|IPR011931|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF17|SSF56349|TIGR02224 BPTD_RS15665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR30069|PTHR30069:SF13|SSF56935 BPTD_RS15670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 PF03824|PTHR40659 BPTD_RS15675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010412 Protein of unknown function DUF1007 PF06226 BPTD_RS15680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006127|IPR006128|IPR006129 Adhesin B|Adhesion lipoprotein|Periplasmic solute binding protein, ZnuA-like GO:0007155|GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PR00690|PR00691|PTHR30477|PTHR30477:SF16|SSF53807 BPTD_RS15685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001626|IPR029022 ABC transporter, BtuC-like|ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 PF00950|PTHR30477|PTHR30477:SF3|SSF81345 BPTD_RS15690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF581|SM00382|SSF52540 BPTD_RS15700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|PTHR33202:SF6|SSF46785 BPTD_RS15705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|SM00833|SSF52540|SSF90002 BPTD_RS15710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000962|IPR012784|IPR020458 RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site GO:0008270 MF_00926|PF01258|PS01102|PTHR33823|PTHR33823:SF2|SSF109635|SSF57716|TIGR02420 BPTD_RS15715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|PTHR32194|SSF56235|TIGR03692 BPTD_RS15720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR003959|IPR004491|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 G3DSA:1.10.8.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00249|PF00004|PF07724|PF10431|PTHR11262|PTHR11262:SF3|SM00382|SM01086|SSF52540|TIGR00390 BPTD_RS15725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021647 Copper binding periplasmic protein CusF PF11604 BPTD_RS15730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016030|IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10|PD007457|PF01923|PTHR12213|SSF89028|TIGR00636 BPTD_RS15735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001736|IPR025202 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|PTHR21248|PTHR21248:SF12|SM00155|SSF56024 BPTD_RS15745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR005116|IPR008995|IPR011868|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate ABC transporter, ATP-binding protein|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1 GO:0005524|GO:0015098|GO:0015689|GO:0016020|GO:0016887 G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF03459|PS00211|PTHR24220|PTHR24220:SF284|SM00382|SSF50331|SSF52540|TIGR02142 BPTD_RS15750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30183|SSF161098|TIGR02141 BPTD_RS15755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|SSF53850|TIGR01256 BPTD_RS15760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|PTHR10992:SF26|SSF53474 BPTD_RS15765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010852|IPR021005|IPR023286 ABATE domain|Putative stress-induced transcription regulator|Zinc finger, CGNR G3DSA:1.10.3300.10|PF07336|PF11706|PTHR35525|PTHR35525:SF3|SSF160904 BPTD_RS15775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025421 Protein of unknown function DUF4148 PF13663 BPTD_RS15795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000485|IPR000524|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|PTHR30154|SM00344|SM00345|SSF46785|SSF54909 BPTD_RS15800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PTHR30086|PTHR30086:SF14 BPTD_RS15810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|PTHR30632:SF0|SSF53850|TIGR01256 BPTD_RS15815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS15820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF8|SSF56235 BPTD_RS15825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|PTHR33271|SSF51182 BPTD_RS15830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF208|SSF51905 BPTD_RS15835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000551|IPR001387|IPR009061|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|MerR-type HTH domain|Putative DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0006355|GO:0043565 G3DSA:1.10.1660.10|G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF07883|PF13411|PF13560|PTHR10245|PTHR10245:SF53|SM00422|SM00530|SSF46955|SSF47413|SSF51182 BPTD_RS15845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000212|IPR014017|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF13361|PTHR11070|SSF52540 BPTD_RS15850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000212|IPR014016|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524 G3DSA:3.40.50.300|PF00580|PTHR11070|SSF52540 BPTD_RS15860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF143011 BPTD_RS15865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS15870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13304|PTHR40396|SSF52540 BPTD_RS15875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002295|IPR002941|IPR029063 DNA methylase N-4/N-6|N6 adenine-specific DNA methyltransferase, D21 class|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|PF01555|PR00506|PTHR13370|PTHR13370:SF7|SSF53335 BPTD_RS15880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006935|IPR011578|IPR027417 Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, FokI, C-terminal/endonuclease I, core GO:0003677|GO:0004536|GO:0005524|GO:0016787 G3DSA:3.40.91.30|PF04851|SSF52540 BPTD_RS15885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|PF02661|PTHR13504|SSF140931 BPTD_RS15890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|PF14659|PTHR30629|PTHR30629:SF3|SSF56349 BPTD_RS15895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|PTHR23305|SSF52540|SSF81271|TIGR00092 BPTD_RS15900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 BPTD_RS15905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|PS01196|PTHR17224|PTHR17224:SF1|SSF53178|TIGR00447 BPTD_RS15910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001021|IPR011035|IPR020055|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25, short-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|MF_01336|PD012503|PF01386|PF14693|PTHR33284|SSF50715|TIGR00731 BPTD_RS15915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|PTHR10210|PTHR10210:SF41|SM01400|SSF53271|TIGR01251 BPTD_RS15925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|PTHR20861|PTHR20861:SF2|SSF54211|SSF55060|TIGR00154 BPTD_RS15930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004565|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein LolB GO:0009279|GO:0015031 G3DSA:2.50.20.10|MF_00233|PF03550|SSF89392|TIGR00548 BPTD_RS15935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PF14559|PTHR23083|PTHR23083:SF195|SM00028|SSF48452 BPTD_RS15940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010663|IPR010979|IPR012319|IPR015886|IPR015887|IPR020629 DNA glycosylase/AP lyase, H2TH DNA-binding|DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site|Formamidopyrimidine-DNA glycosylase|Formamidopyrimidine-DNA glycosylase, catalytic domain|Ribosomal protein S13-like, H2TH|Zinc finger, FPG/IleRS-type GO:0003676|GO:0003677|GO:0003684|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_00103|PF01149|PF06827|PF06831|PS01242|PTHR22993|PTHR22993:SF15|SM00898|SM01232|SSF46946|SSF57716|SSF81624|TIGR00577 BPTD_RS15945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF5|SM00849|SSF56281 BPTD_RS15950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF219|SSF51905 BPTD_RS15955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021233 Protein of unknown function DUF2783 PF10932 BPTD_RS15960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30118|PTHR30118:SF8|SSF46785|SSF53850 BPTD_RS15965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005708|IPR011051|IPR014710|IPR022950 Homogentisate 1,2-dioxygenase|Homogentisate 1,2-dioxygenase, bacterial|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0004411|GO:0006559|GO:0006570|GO:0006572|GO:0055114 G3DSA:2.60.120.10|MF_00334|PF04209|PTHR11056|PTHR11056:SF0|SSF51182|TIGR01015 BPTD_RS15970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005959|IPR011234|IPR015377 Fumarylacetoacetase|Fumarylacetoacetase, C-terminal-related|Fumarylacetoacetase, N-terminal GO:0003824|GO:0004334|GO:0008152|GO:0009072 G3DSA:2.30.30.230|G3DSA:3.90.850.10|PF01557|PF09298|PTHR11820|PTHR11820:SF1|SSF56529|SSF63433|TIGR01266 BPTD_RS15975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000917|IPR012160|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Lipoteichoic acid synthase-like|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PIRSF005091|PTHR10342|PTHR10342:SF236|SSF53649 BPTD_RS15980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003660|IPR003661 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0004871|GO:0007165|GO:0016021 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PTHR24423|SM00387|SM00388|SSF47384|SSF55874 BPTD_RS15985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF552|SM00448|SM00862|SSF52172 BPTD_RS15990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PTHR11748|PTHR11748:SF76|SSF55103|SSF56176 BPTD_RS15995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005479|IPR013816 ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 G3DSA:3.30.470.20|PF02786|SSF56059 BPTD_RS16000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF28|SSF53738|SSF55957 BPTD_RS16005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001672|IPR018189|IPR023096 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, C-terminal|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:1.10.1390.10|G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|PS00765|PTHR11469|SSF53697 BPTD_RS16010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13477|PTHR12526|SSF53756 BPTD_RS16015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13439|PF13692|PTHR12526|SSF53756 BPTD_RS16020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|PTHR12526|SSF53756 BPTD_RS16025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|PTHR11772|PTHR11772:SF10|SSF52402|SSF56235|TIGR01536 BPTD_RS16030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 BPTD_RS16035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023 BPTD_RS16040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|PTHR10366|PTHR10366:SF472|SSF51735 BPTD_RS16045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|PTHR11374|PTHR11374:SF25|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 BPTD_RS16050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 PF00953|PTHR22926|PTHR22926:SF7 BPTD_RS16055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009078|IPR011566|IPR012347 Ferritin-like superfamily|Ferritin-related|Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 G3DSA:1.20.1260.10|MF_01658|PF03232|PTHR11237|PTHR11237:SF3|SSF47240 BPTD_RS16060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|PTHR34352|SSF82784 BPTD_RS16065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000398|IPR020940|IPR023451 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|PTHR11548|SSF55831|TIGR03284 BPTD_RS16070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001796|IPR012259|IPR017925|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PS00075|PTHR22778|PTHR22778:SF16|SSF53597 BPTD_RS16075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|PTHR11751|PTHR11751:SF386|SM00345|SSF46785|SSF53383 BPTD_RS16080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF80|SSF53383 BPTD_RS16085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|PTHR11699:SF188|SSF53720|TIGR01722 BPTD_RS16090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF21|SSF53850 BPTD_RS16095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS16100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF54|SSF161098 BPTD_RS16110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009197|IPR010799|IPR015995 Microcystin LR degradation protein MlrC|Microcystin LR degradation protein MlrC, C-terminal|Microcystin LR degradation protein MlrC, N-terminal PF07171|PF07364|PIRSF012702 BPTD_RS16115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003495|IPR004400|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase|Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 G3DSA:3.40.50.300|MF_01389|PF02492|PIRSF005624|PTHR31715|SSF52540|TIGR00101 BPTD_RS16125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MF_01385|PF01730|PIRSF009467|PTHR33620 BPTD_RS16130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004029|IPR007864|IPR012406 UreE urease accessory, N-terminal|Urease accessory protein UreE|Urease accessory protein UreE, C-terminal domain GO:0005737|GO:0006457|GO:0006461|GO:0016151|GO:0018307|GO:0019627 G3DSA:2.60.260.20|G3DSA:3.30.70.790|MF_00822|PF02814|PF05194|SM00988|SSF69287|SSF69737 BPTD_RS16135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005848|IPR006680|IPR011059|IPR011612|IPR017950|IPR029754|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Urease active site|Urease alpha-subunit, N-terminal domain|Urease nickel binding site|Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01953|PF00449|PF01979|PR01752|PS00145|PS01120|PTHR22642|PTHR22642:SF7|SSF51338|SSF51556|TIGR01792 BPTD_RS16140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002019 Urease, beta subunit G3DSA:2.10.150.10|MF_01954|PF00699|PTHR33569|PTHR33569:SF1|SSF51278|TIGR00192 BPTD_RS16145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PF04955|PIRSF016919 BPTD_RS16150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002026|IPR012010 Urease, gamma subunit|Urease, gamma/gamma-beta subunit GO:0009039|GO:0016151|GO:0019627|GO:0043419 G3DSA:3.30.280.10|MF_00739|PD002319|PF00547|PIRSF001223|PTHR33569|PTHR33569:SF1|SSF54111|TIGR00193 BPTD_RS16155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MF_01384|PF01774|PTHR33643|PTHR33643:SF1 BPTD_RS16160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000551|IPR009061|IPR015358 MerR-type HTH domain|Putative DNA-binding domain|Transcription regulator MerR, DNA binding GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PTHR30204|PTHR30204:SF16|SM00422|SSF46955 BPTD_RS16165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001041|IPR012675|IPR018298 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin, iron-sulphur binding site|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PS00814|PTHR23426|PTHR23426:SF25|SSF54292 BPTD_RS16170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|PTHR33337|PTHR33337:SF14|SSF51316 BPTD_RS16180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PTHR11751|PTHR11751:SF333|SM00345|SM00866|SSF46785|SSF64288 BPTD_RS16185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001354|IPR006395|IPR022662|IPR022665|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase|Methylaspartate ammonia-lyase|Methylaspartate ammonia-lyase, C-terminal|Methylaspartate ammonia-lyase, N-terminal GO:0003824|GO:0008152|GO:0050096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF05034|PF07476|PIRSF017107|PTHR13794|PTHR13794:SF57|SSF51604|SSF54826|TIGR01502 BPTD_RS16190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS16195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS16200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BPTD_RS16205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007390 Sporulation stage V, protein R PF04293|PTHR30029|PTHR30029:SF2 BPTD_RS16210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002035|IPR006698 Uncharacterised protein family UPF0229|von Willebrand factor, type A MF_01232|PF04285|PTHR30510|SSF53300 BPTD_RS16220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24317|SSF51735 BPTD_RS16235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BPTD_RS16240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR028154 AMP-dependent ligase, C-terminal|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF14535|PTHR36932|PTHR36932:SF1|SSF56801 BPTD_RS16245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|SSF46689|SSF48498 BPTD_RS16250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PIRSF016578|PS00072|PTHR10909|PTHR10909:SF305|SSF47203|SSF56645 BPTD_RS16255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482 BPTD_RS16260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF371 BPTD_RS16265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS16270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS16275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|SSF53822 BPTD_RS16280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24322|PTHR24322:SF356|SM00822|SSF51735 BPTD_RS16285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|PTHR11941:SF13|SSF52096 BPTD_RS16290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|PTHR34075|PTHR34075:SF2|SSF50249 BPTD_RS16295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002155|IPR016039|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF02803|PIRSF000429|PTHR18919|PTHR18919:SF108|SSF53901 BPTD_RS16300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PF13452|PTHR13078|SSF54637 BPTD_RS16305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR32487|SSF51735 BPTD_RS16310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:2.60.40.1560 BPTD_RS16325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005804 Fatty acid desaturase domain GO:0006629 PF00487 BPTD_RS16330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016039 Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|SSF53901 BPTD_RS16335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|PF08541|PF08545|SSF53901 BPTD_RS16340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002156|IPR012337|IPR022892 Ribonuclease H|Ribonuclease H domain|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|PTHR10642|SSF53098 BPTD_RS16350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF836|SSF53335 BPTD_RS16355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001279|IPR017782|IPR032282 Hydroxyacylglutathione hydrolase|Hydroxyacylglutathione hydrolase, C-terminal domain|Metallo-beta-lactamase GO:0004416|GO:0019243 G3DSA:3.60.15.10|MF_01374|PF00753|PF16123|PIRSF005457|PTHR11935|PTHR11935:SF7|SM00849|SSF56281|TIGR03413 BPTD_RS16360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000189|IPR008258|IPR018392|IPR023346 LysM domain|Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PS00922|PTHR21666|PTHR21666:SF206|SM00257|SSF53955|SSF54106 BPTD_RS16365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|PTHR24322|PTHR24322:SF317|SSF51735 BPTD_RS16370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS16375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|PTHR39624|PTHR39624:SF2|SSF82784 BPTD_RS16380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007486|IPR029024 Inner membrane protein YebE|TerB-like G3DSA:1.10.3680.10|PF04391|SSF158682 BPTD_RS16385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS16390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF292|SM00448|SM00862|SSF46894|SSF52172 BPTD_RS16405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SSF158472|SSF47384|SSF55874 BPTD_RS16410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PTHR30365|PTHR30365:SF1 BPTD_RS16415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PIRSF006446|PTHR30365|PTHR30365:SF8 BPTD_RS16420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00126|PF00749|PF03950|PR00987|PS00178|PTHR11451|PTHR11451:SF29|SSF50715|SSF52374|TIGR00440 BPTD_RS16425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005526|IPR007874|IPR013033|IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC|Septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC, N-terminal GO:0000902|GO:0000917|GO:0051302|GO:0051726 G3DSA:2.160.20.70|MF_00267|PF03775|PF05209|PTHR34108|PTHR34108:SF1|SSF63848|TIGR01222 BPTD_RS16430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002586|IPR010223|IPR025501|IPR027417 ATP binding protein MinD|ATP binding protein MinD, bacterial-type|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0000918|GO:0016887 G3DSA:3.40.50.300|PF01656|PIRSF003092|PTHR13696|PTHR13696:SF1|SSF52540|TIGR01968 BPTD_RS16435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 G3DSA:3.30.1070.10|MF_00262|PF03776|PTHR33404|SSF55229|TIGR01215 BPTD_RS16440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS16445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008816 Glycine zipper 2TM domain GO:0019867 PD052686|PF05433 BPTD_RS16450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR14119|PTHR14119:SF3|SSF52499 BPTD_RS16455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR19211|PTHR19211:SF7|SSF52540 BPTD_RS16460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF12|SSF103481 BPTD_RS16465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF47|SSF161098 BPTD_RS16470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF24|SSF53850 BPTD_RS16475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 BPTD_RS16480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 BPTD_RS16490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR004602|IPR013815|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|PF00005|PS00211|PTHR32282|PTHR32282:SF2|SM00382|SSF52540|TIGR00630 BPTD_RS16495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005801|IPR005802|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal|Para-aminobenzoate synthase, component I GO:0009058|GO:0009396 G3DSA:3.60.120.10|PF00425|PR00095|PTHR11236|PTHR11236:SF18|SSF56322|TIGR00553 BPTD_RS16500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|SSF56752 BPTD_RS16505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS16510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|PTHR24322:SF513|SSF51735 BPTD_RS16515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS16520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000873|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PTHR24095|SSF56801 BPTD_RS16525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|PTHR11751|SM00345|SM00866|SSF46785|SSF64288 BPTD_RS16530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF159|SSF69572 BPTD_RS16535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001958|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01035|PTHR23501|SSF103473 BPTD_RS16540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006840|IPR013024 Butirosin biosynthesis, BtrG-like|ChaC-like protein G3DSA:3.10.490.10|PF04752|PTHR12192|PTHR12192:SF9|SSF110857 BPTD_RS16545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000659|IPR011576|IPR012349|IPR019576|IPR019740 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase|Pyridoxamine 5'-phosphate oxidase, conserved site|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0004733|GO:0008615|GO:0010181|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.30.110.10|MF_01629|PF01243|PF10590|PIRSF000190|PS01064|PTHR10851|PTHR10851:SF0|SSF50475|TIGR00558 BPTD_RS16550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|PTHR30466|PTHR30466:SF1|SM00903|SSF50475 BPTD_RS16555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF207|SSF51905 BPTD_RS16560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002376|IPR002912|IPR004810 ACT domain|Formyl transferase, N-terminal|Formyltetrahydrofolate deformylase GO:0006189|GO:0008152|GO:0008864|GO:0009058|GO:0016597|GO:0016742 G3DSA:3.30.70.260|G3DSA:3.40.50.170|MF_01927|PF00551|PF01842|PIRSF036480|PR01575|PTHR10520|PTHR10520:SF7|SSF53328|SSF55021|TIGR00655 BPTD_RS16565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF4|SSF46785|SSF53850 BPTD_RS16570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006091|IPR009075|IPR009100 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0055114 G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PTHR10909|PTHR10909:SF262|SSF47203|SSF56645 BPTD_RS16575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010621|IPR010679|IPR023289 Domain of unknown function DUF1214|Domain of unknown function DUF1254|VPA0735-like domain G3DSA:1.10.3360.10|G3DSA:2.60.120.600|G3DSA:2.60.40.1610|PF06742|PF06863|PTHR36509|PTHR36509:SF2|SSF160935 BPTD_RS16585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic SSF160935 BPTD_RS16590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00134_B|PF00218|PS00614|PTHR22854|PTHR22854:SF2|SSF51366 BPTD_RS16600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000312|IPR005940|IPR017459 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|PTHR11922|PTHR11922:SF5|SSF47648|SSF52418|TIGR01245 BPTD_RS16605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF7|SSF52317|TIGR00566 BPTD_RS16610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005256|IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, PabB-like|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0000162|GO:0004049|GO:0009058|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|PTHR11236:SF9|SSF56322|TIGR00564 BPTD_RS16615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006346|IPR006439|IPR023198|IPR023214 2-phosphoglycolate phosphatase, prokaryotic|HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0008967|GO:0016787|GO:0046295 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|PTHR18901|PTHR18901:SF24|SSF56784|TIGR01449|TIGR01509|TIGR01549 BPTD_RS16620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|PTHR11749|PTHR11749:SF7|SSF51366|TIGR01163 BPTD_RS16625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007474|IPR023065 ApaG domain|Uncharacterised protein family ApaG G3DSA:2.60.40.1470|MF_00791|PF04379|PTHR14289|SSF110069 BPTD_RS16630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005300|IPR009009|IPR010611|IPR026044 3D domain|Lytic transglycosylase MltA|Membrane-bound lytic murein transglycosylase A|RlpA-like protein, double-psi beta-barrel domain GO:0004553|GO:0009254|GO:0019867 G3DSA:2.40.40.10|PF03562|PF06725|PIRSF019422|PTHR30124|PTHR30124:SF0|SM00925|SSF50685 BPTD_RS16635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002938|IPR010971|IPR018168|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PS01304|PTHR13789|PTHR13789:SF5|SSF51905|TIGR01988 BPTD_RS16640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009094|IPR012336|IPR017937|IPR018950 Disulphide bond isomerase, DsbC, N-terminal|Disulphide bond isomerase, DsbC/G, N-terminal|Thioredoxin, conserved site|Thioredoxin-like fold GO:0045454 G3DSA:3.10.450.70|G3DSA:3.40.30.10|PF10411|PF13098|PS00194|PTHR35272|SSF52833 BPTD_RS16645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006139|IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PTHR10996|PTHR10996:SF127|SSF51735|SSF52283 BPTD_RS16650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011063|IPR012089|IPR014729 2-thiocytidine tRNA biosynthesis protein, TtcA|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0008033 G3DSA:3.40.50.620|MF_01850|PF01171|PTHR11807|PTHR11807:SF16|SSF52402 BPTD_RS16660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|SM00905|SSF55620|TIGR00525|TIGR00526 BPTD_RS16665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000103|IPR016040|IPR023753 FAD/NAD(P)-binding domain|NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PTHR22912|SSF51735|SSF51905 BPTD_RS16670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001478|IPR007963|IPR024191 PDZ domain|Peptidase M61|Peptidase M61, catalytic domain GO:0005515 G3DSA:2.30.42.10|PF05299|PF13180|PIRSF016493|PTHR22939|PTHR22939:SF73|SM00228|SSF50156|SSF55486 BPTD_RS16675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|PTHR11941:SF54|SSF52096 BPTD_RS16680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010679|IPR023289 Domain of unknown function DUF1254|VPA0735-like domain G3DSA:1.10.3360.10|G3DSA:2.60.40.1610|PF06863|PTHR36509|PTHR36509:SF2|SSF160935 BPTD_RS16685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010621 Domain of unknown function DUF1214 G3DSA:2.60.120.600|PF06742|PTHR36509|PTHR36509:SF2|SSF160935 BPTD_RS16695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005598 ATP synthase protein I PF03899 BPTD_RS16700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000568|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PS00449|PTHR11410|PTHR11410:SF7|SSF81336|TIGR01131 BPTD_RS16705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000454|IPR002379|IPR005953|IPR020537 ATPase, F0 complex, subunit C|ATPase, F0 complex, subunit C, DCCD-binding site|ATPase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|SSF81333|TIGR01260 BPTD_RS16710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002146|IPR005864|IPR028987 ATPase, F0 complex, subunit B, bacterial|ATPase, F0 complex, subunit B/B', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|PTHR33445|SSF81573|TIGR01144 BPTD_RS16715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000711|IPR026015 ATPase, OSCP/delta subunit|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PTHR11910|SSF47928|TIGR01145 BPTD_RS16720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|PTHR15184|PTHR15184:SF3|SSF47917|SSF50615|SSF52540|TIGR00962 BPTD_RS16725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000131|IPR023632|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit conserved site|ATPase, F1 complex, gamma subunit domain GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PS00153|PTHR11693|SSF52943|TIGR01146 BPTD_RS16730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PS00152|PTHR15184|PTHR15184:SF44|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 BPTD_RS16735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001469|IPR020546|IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain|ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:2.60.15.10|MF_00530|PD000944|PF02823|PTHR13822|SSF46604|SSF51344|TIGR01216 BPTD_RS16740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002197|IPR009057 DNA binding HTH domain, Fis-type|Homeodomain-like GO:0003677|GO:0043565 G3DSA:1.10.10.60|PF02954|SSF46689 BPTD_RS16745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000257|IPR006361 Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PS00907|PTHR21091|PTHR21091:SF2|SSF51726|TIGR01464 BPTD_RS16750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001650|IPR005259|IPR011545|IPR014001|IPR024064|IPR027417 DEAD/DEAH box helicase domain|FdhE-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0032508 G3DSA:3.40.50.300|MF_00983|PF00270|PF00271|PTHR30580|SM00487|SM00490|SSF144020|SSF52540|TIGR00595 BPTD_RS16755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000212|IPR005752|IPR013986|IPR014016|IPR014017|IPR027417 ATP-dependent DNA helicase Rep|DExx box DNA helicase domain|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0006268|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|MF_01920|PF00580|PF13361|PTHR11070|PTHR11070:SF19|SSF52540 BPTD_RS16760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001261|IPR002933|IPR011650|IPR017150 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20, glutamate carboxypeptidase GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037238|PS00758|PTHR11014|PTHR11014:SF84|SSF53187|SSF55031 BPTD_RS16770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BPTD_RS16785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF67|SSF161098 BPTD_RS16790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS16795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 G3DSA:3.40.630.10|PF04952|SSF53187 BPTD_RS16810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000631|IPR017953|IPR029056 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Carbohydrate kinase, predicted, conserved site|Ribokinase-like GO:0052855 G3DSA:3.40.1190.20|MF_01965|PF01256|PS01050|PTHR12592|PTHR12592:SF0|SSF53613|TIGR00196 BPTD_RS16815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|PTHR11941:SF15|SSF52096 BPTD_RS16820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF77|SSF52096 BPTD_RS16825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|PTHR32332|PTHR32332:SF21|SSF51412 BPTD_RS16830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PS01081|PTHR30055|PTHR30055:SF11|SSF46689|SSF48498 BPTD_RS16835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PIRSF016578|PS00072|PS00073|PTHR10909|SSF47203|SSF56645 BPTD_RS16840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS16845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|PTHR23309|PTHR23309:SF12|SSF48179|SSF51735 BPTD_RS16850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000923|IPR008972|IPR028871 Blue (type 1) copper domain|Blue (type 1) copper protein, binding site|Cupredoxin GO:0005507|GO:0009055 G3DSA:2.60.40.420|PD003655|PF00127|PS00196|SSF49503 BPTD_RS16875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001117|IPR002355|IPR006376|IPR008972|IPR011706|IPR011707|IPR033138 Copper-resistance protein CopA|Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3|Multicopper oxidases, conserved site GO:0005507|GO:0016491|GO:0042597|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07731|PF07732|PS00079|PS00080|PTHR11709|PTHR11709:SF33|SSF49503|TIGR01480 BPTD_RS16880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 PF05275 BPTD_RS16885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|SSF52096 BPTD_RS16900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS16905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010300|IPR011051|IPR014710 Cysteine dioxygenase type I|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0005506|GO:0016702|GO:0055114 G3DSA:1.20.5.440|G3DSA:2.60.120.10|PF05995|PTHR12918|SSF51182 BPTD_RS16910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|SSF75304 BPTD_RS16915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF6|SSF53822 BPTD_RS16920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PR01023|PTHR30128|SSF103088 BPTD_RS16930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 G3DSA:3.30.1360.20|MF_00434|PF01329|PTHR12599|PTHR12599:SF7|SSF55248 BPTD_RS16940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF15|SSF53448 BPTD_RS16945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF01636|PTHR33540|PTHR33540:SF1|SSF56112 BPTD_RS16950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 G3DSA:2.60.450.10|MF_01411|PF04453|PTHR30189 BPTD_RS16955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000297|IPR015391|IPR023034|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl isomerase SurA|SurA N-terminal|Trigger factor/SurA domain GO:0003755|GO:0006457|GO:0016853|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 G3DSA:3.10.50.40|MF_01183|PF00639|PF09312|PF13616|PTHR10657|PTHR10657:SF15|SSF109998|SSF54534 BPTD_RS16960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|PTHR11727|PTHR11727:SF7|SM00650|SSF53335|TIGR00755 BPTD_RS16965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004381|IPR018193 Glycerate kinase|Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 G3DSA:3.90.1510.10|PF02595|PIRSF006078|PTHR21599|SSF110738|TIGR00045 BPTD_RS16970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|PTHR11817|PTHR11817:SF17|SSF50800|SSF51621|SSF52935|TIGR01064 BPTD_RS16975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011415|IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain|Predicted bifunctional spore maturation protein, fused SpmA/SpmB PF07670|PIRSF036542|PTHR35793|PTHR35793:SF2 BPTD_RS16980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0033539|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF09317|PTHR10909|PTHR10909:SF283|SSF47203|SSF56645 BPTD_RS16985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS16990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF8|SSF56235 BPTD_RS16995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS17000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PTHR30349|PTHR30349:SF32 BPTD_RS17005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 BPTD_RS17010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF25|SSF81345 BPTD_RS17015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011990|IPR014162|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Tol-Pal system, YbgF GO:0005515 G3DSA:1.25.40.10|PF13174|PF13432|SSF48452|TIGR02795 BPTD_RS17020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006664|IPR006665|IPR006690|IPR014169 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PS01068|PTHR30128|PTHR30128:SF18|SSF103088|TIGR02802 BPTD_RS17025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007195|IPR011659|IPR014167|IPR015943 Tol-Pal system beta propeller repeat-containing protein, TolB|TolB, N-terminal|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0015031|GO:0017038|GO:0042597 G3DSA:2.130.10.10|G3DSA:3.40.50.10070|MF_00671|PF04052|PF07676|PTHR11731|PTHR11731:SF123|SSF52964|SSF69304|TIGR02800 BPTD_RS17030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006260|IPR014161 Tol-Pal system, TolA|TonB, C-terminal GO:0005215|GO:0006810|GO:0016020 G3DSA:3.30.1150.10|PF13103|SSF74653|TIGR01352|TIGR02794 BPTD_RS17035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003400|IPR014168 Biopolymer transport protein ExbD/TolR|Biopolymer transport, TolR GO:0005215|GO:0006810|GO:0015031|GO:0016020|GO:0016021 PF02472|PTHR30558|PTHR30558:SF7|TIGR02801 BPTD_RS17040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002898|IPR014163 MotA/TolQ/ExbB proton channel|Tol-Pal system, TolQ GO:0006810|GO:0008565|GO:0015031|GO:0016020|GO:0016021 PF01618|PTHR30625|PTHR30625:SF3|TIGR02796 BPTD_RS17045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006683|IPR006684|IPR014166|IPR029069 Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain|Thioesterase domain|Tol-Pal system-associated acyl-CoA thioesterase GO:0016787|GO:0016790 G3DSA:3.10.129.10|PF03061|PIRSF003230|PTHR31793|PTHR31793:SF9|SSF54637|TIGR00051|TIGR02799 BPTD_RS17050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PIRSF001535|PR01046|PTHR11451|PTHR11451:SF3|SSF52954|SSF55681|SSF55826|TIGR00409 BPTD_RS17055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000086|IPR015797|IPR020084|IPR020476|IPR022927 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|RNA pyrophosphohydrolase RppH GO:0016787 G3DSA:3.90.79.10|MF_00298|PF00293|PR00502|PS00893|PTHR23114|SSF55811 BPTD_RS17060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF518|SM00448|SM00862|SSF52172 BPTD_RS17065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013727 Two-component sensor kinase, N-terminal PF08521 BPTD_RS17070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|PTHR13604|SSF143081 BPTD_RS17085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019659 Protein of unknown function DUF2514 PF10721 BPTD_RS17090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023346|IPR023347 Lysozyme domain|Lysozyme-like domain GO:0003796 G3DSA:1.10.530.40|PTHR38107|SSF53955 BPTD_RS17095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032124 Bacteriophage F116-like holin PF16082 BPTD_RS17100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013425 Autotransporter-associated beta strand repeat TIGR02601 BPTD_RS17115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015406|IPR032876 Domain of unknown function DUF1983|Tip attachment protein J PF09327|PF13550 BPTD_RS17120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|SSF54001 BPTD_RS17125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014974 Domain of unknown function DUF1833 PF08875 BPTD_RS17135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006431|IPR009628 Bacteriophage lambda, GpH, tail tape measure, C-terminal|Bacteriophage lambda, GpH, tail tape measure, N-terminal PF06791|PF09718|TIGR01541 BPTD_RS17140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014915 Bacteriophage TLS, TfmB PF08809 BPTD_RS17145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001345|IPR014859 Phage tail assembly chaperone|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 PF08748|PS00175 BPTD_RS17150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR014918 Phage tail tube protein 3 PF08813 BPTD_RS17155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003615|IPR016177 DNA-binding domain|HNH nuclease GO:0003677 PF13392|SSF54060|SSF54171 BPTD_RS17160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025395 Protein of unknown function DUF4128 PF13554 BPTD_RS17195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:1.10.1510.10 BPTD_RS17215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006528|IPR017029 Phage head morphogenesis domain|Putative phage head morphogenesis protein PF04233|PIRSF034565 BPTD_RS17220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025129 Domain of unknown function DUF4055 PF13264 BPTD_RS17225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004921 Terminase, large subunit PF03237 BPTD_RS17230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic G3DSA:1.10.10.700 BPTD_RS17235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015927|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B/S26C G3DSA:2.10.109.10|SSF51306 BPTD_RS17265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PF07264 BPTD_RS17275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012336|IPR013766 Thioredoxin domain|Thioredoxin-like fold GO:0045454 G3DSA:3.40.30.10|PF00085|SSF52833 BPTD_RS17280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|PTHR24031|PTHR24031:SF261|SM00487|SM00490|SSF52540 BPTD_RS17285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008407 Branched-chain amino acid transport, AzlD PF05437 BPTD_RS17290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011606 Branched-chain amino acid transport, permease PF03591|PTHR34979 BPTD_RS17295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001544|IPR005785 Aminotransferase class IV|Branched-chain amino acid aminotransferase I GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|PTHR11825:SF7|SSF56752|TIGR01122 BPTD_RS17300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019401 Zinc finger, CHCC-type G3DSA:2.60.260.40|PF10276 BPTD_RS17305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF13474|PTHR34957|PTHR34957:SF3|SSF54427 BPTD_RS17310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012020|IPR022742|IPR029058 AB hydrolase 4 family|Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PIRSF005211|PTHR10794|SSF53474 BPTD_RS17315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001915|IPR011990|IPR030873 Beta-barrel assembly-enhancing protease|Peptidase M48|Tetratricopeptide-like helical domain GO:0004222|GO:0005515|GO:0006508|GO:0008237|GO:0016020|GO:0061077 G3DSA:1.25.40.10|G3DSA:3.30.2010.10|MF_00997|PF01435|PTHR22726|PTHR22726:SF10|SSF48452 BPTD_RS17320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF14|SSF53448|TIGR01099 BPTD_RS17325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related PF09678 BPTD_RS17330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002299|IPR023614 Porin domain|Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 G3DSA:2.40.160.10|PF13609|PR00184|SSF56935 BPTD_RS17335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 PF01699 BPTD_RS17355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000994|IPR001131|IPR007865|IPR028980|IPR029149 Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GO:0004177|GO:0030145 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF05195|PS00491|PTHR10804|PTHR10804:SF17|SM01011|SSF53092|SSF55920 BPTD_RS17365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002938|IPR010971|IPR018168|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PS01304|PTHR13789|PTHR13789:SF214|SSF51905|TIGR01988 BPTD_RS17370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001269|IPR004652|IPR013785|IPR018517|IPR024036|IPR032887 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase B|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0002943|GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|MF_02042|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF25|SSF51395|TIGR00737 BPTD_RS17375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002197|IPR005412|IPR009057 DNA binding HTH domain, Fis-type|DNA-binding protein Fis|Homeodomain-like GO:0003677|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF02954|PIRSF002097|PR01590|PTHR32071|SSF46689 BPTD_RS17380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|PTHR11692|PTHR11692:SF2|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 BPTD_RS17385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002176|IPR012337|IPR020563 Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|PTHR30194|SSF53098|TIGR00228 BPTD_RS17390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|PTHR33796|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 BPTD_RS17395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR12126|SSF51735 BPTD_RS17400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|PTHR10314|PTHR10314:SF124|SSF53686 BPTD_RS17405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|PTHR13779|PTHR13779:SF25|SM00382|SSF46785|SSF52540|TIGR00635 BPTD_RS17410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|HRDC domain|HRDC-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|PTHR13710|PTHR13710:SF81|SM00341|SM00487|SM00490|SM00956|SSF47819|SSF52540|TIGR00614|TIGR01389 BPTD_RS17415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00705|PTHR11002|SM00947|SSF53056 BPTD_RS17430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site GO:0016884 G3DSA:3.90.1300.10|PF01425|PS00571|PTHR11895|SSF75304 BPTD_RS17435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|SSF53822 BPTD_RS17440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF1 BPTD_RS17445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF371 BPTD_RS17450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 BPTD_RS17455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS17460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005117|IPR006067 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF01077|PF03460|PTHR11493|PTHR11493:SF47|SSF55124|SSF56014 BPTD_RS17465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008318 Uncharacterised conserved protein UCP030820 PF06073|PIRSF030820 BPTD_RS17470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|PTHR30429|SSF53850|TIGR00363 BPTD_RS17475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PTHR37391|PTHR37391:SF1 BPTD_RS17480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001453 MoaB/Mog domain G3DSA:3.40.980.10|PF00994|PTHR13939|SM00852|SSF53218 BPTD_RS17490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 BPTD_RS17495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008430|IPR011324 Cytotoxic necrotizing factor, Rho-activating domain|Cytotoxic necrotizing factor-like, catalytic G3DSA:3.60.100.10|PF05785|SSF64438 BPTD_RS17500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS17505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010127|IPR018968 Phasin|Phasin, subfamily 1 PF09361|TIGR01841 BPTD_RS17510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001295|IPR005719|IPR005720|IPR012135|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, class 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006222|GO:0016020|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00225|PF01180|PIRSF000164|PS00911|PS00912|PTHR11938|SSF51395|TIGR01036 BPTD_RS17515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007471|IPR007472|IPR016181|IPR017138|IPR030700 Acyl-CoA N-acyltransferase|Arginine-tRNA-protein transferase|Arginine-tRNA-protein transferase, C-terminal|Arginine-tRNA-protein transferase, N-terminal|Putative arginyl-tRNA--protein transferase, prokaryotic GO:0004057|GO:0016598 MF_00689|PF04376|PF04377|PIRSF037208|PTHR21367|PTHR21367:SF0|SSF55729 BPTD_RS17520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004616|IPR016181 Acyl-CoA N-acyltransferase|Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MF_00688|PF03588|PTHR30098|SSF55729|TIGR00667 BPTD_RS17525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000086|IPR015797|IPR020084|IPR029401 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Nudix hydrolase, N-terminal GO:0016787 G3DSA:2.20.70.10|G3DSA:3.90.79.10|PF00293|PF14803|PS00893|PTHR22769|PTHR22769:SF17|SSF55811 BPTD_RS17530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 BPTD_RS17535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR032808 DoxX family PF07681|PTHR33452|PTHR33452:SF1 BPTD_RS17540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021332 Protein of unknown function DUF2944 PF11161 BPTD_RS17560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PTHR30086|PTHR30086:SF4 BPTD_RS17565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS17575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF120|SSF52467|SSF52518 BPTD_RS17580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS17585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|PTHR30468|PTHR30468:SF2|SSF51197 BPTD_RS17590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|PTHR23406|PTHR23406:SF23|SM00919|SM01274|SSF51735|SSF53223|SSF53659 BPTD_RS17595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF3|SSF46785|SSF53850 BPTD_RS17600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS17605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF58|SSF161098 BPTD_RS17610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF442|SM00382|SSF52540 BPTD_RS17620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009197|IPR010799|IPR015995 Microcystin LR degradation protein MlrC|Microcystin LR degradation protein MlrC, C-terminal|Microcystin LR degradation protein MlrC, N-terminal PF07171|PF07364|PIRSF012702 BPTD_RS17625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30126|SSF46785|SSF53850 BPTD_RS17635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|PTHR36929|PTHR36929:SF1|SSF55961 BPTD_RS17640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR38600|PTHR38600:SF1|SM00418|SSF46785 BPTD_RS17645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007844 AsmA PF05170|PTHR30441|PTHR30441:SF4 BPTD_RS17650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005303 MOSC, N-terminal beta barrel PF03476|SSF141673 BPTD_RS17655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PF03594|PTHR30199|PTHR30199:SF0|TIGR00843 BPTD_RS17660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF00037|PS00198|PTHR24960|PTHR24960:SF38|SSF54862 BPTD_RS17665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|PTHR21342|PTHR21342:SF1|SSF52374|TIGR00125|TIGR01510 BPTD_RS17670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|PTHR18895|PTHR18895:SF60|SSF53335|TIGR00095 BPTD_RS17675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PTHR11564|PTHR11564:SF16|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 BPTD_RS17680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007899 CHAD domain PF05235|PTHR39339|PTHR39339:SF1|SM00880 BPTD_RS17685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023577|IPR033469 CYTH domain|CYTH-like domain G3DSA:2.40.320.10|PF01928|PTHR39569|PTHR39569:SF1|SSF55154 BPTD_RS17690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR005769 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC GO:0005887|GO:0006810|GO:0015604|GO:0015716|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30043|PTHR30043:SF1|SSF161098|TIGR01097 BPTD_RS17695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR005769 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC GO:0005887|GO:0006810|GO:0015604|GO:0015716|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30043|PTHR30043:SF1|SSF161098|TIGR01097 BPTD_RS17700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF408|SSF52540 BPTD_RS17705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF327|SSF52540 BPTD_RS17715 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 G3DSA:3.40.190.10|PF12974|PTHR35841|SSF53850|TIGR01098 BPTD_RS17720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|PTHR30136:SF8|SM00346|SSF46785|SSF55781 BPTD_RS17725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006379|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB G3DSA:3.40.50.1000|PF08282|SSF56784|TIGR01484 BPTD_RS17730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000422|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00180|PF00925|PF00926|PIRSF001259|PTHR21327|PTHR21327:SF6|SSF142695|SSF55821|TIGR00506 BPTD_RS17735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|PTHR21058|SSF52121|TIGR00114 BPTD_RS17740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|PTHR11078|SSF48013|TIGR01951 BPTD_RS17745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|PTHR30270|PTHR30270:SF0|SSF55326|SSF56042|TIGR01379 BPTD_RS17750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007686|IPR026037 Phosphatidylglycerophosphatase A|YutG/PgpA domain GO:0006629|GO:0008962 PF04608|PIRSF006162|PTHR36305|SSF101307 BPTD_RS17755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|PTHR13939|SSF142433|TIGR00199 BPTD_RS17760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001754|IPR011060|IPR011995|IPR013785|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Orotidine 5'-phosphate decarboxylase, type 2|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0006221|GO:0008152 G3DSA:3.20.20.70|MF_01215|PF00215|PS00156|PTHR19278|PTHR19278:SF1|SM00934|SSF51366|TIGR02127 BPTD_RS17765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF140|SSF51905 BPTD_RS17770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 G3DSA:1.10.3830.10|PF01219|PTHR34299|PTHR34299:SF1 BPTD_RS17775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017039 Virulence factor BrkB PF03631|PIRSF035875|PTHR30213|PTHR30213:SF1|TIGR00765 BPTD_RS17780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003991|IPR004899|IPR005546|IPR006315|IPR011050|IPR012332 Autotransporter beta-domain|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|Pertactin virulence factor family|Pertactin, central region GO:0007155|GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03212|PF03797|PR01484|SM00869|SSF103515|SSF51126|TIGR01414 BPTD_RS17785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|SSF48592|SSF52029|SSF54849|TIGR02348 BPTD_RS17790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|PTHR10772|SM00883|SSF50129 BPTD_RS17795 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BPTD_RS17800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR026286 Maleate isomerase/Arylmalonate decarboxylase PIRSF015736|PTHR40267 BPTD_RS17805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BPTD_RS17810 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000103|IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00368|PR00469|PTHR11632|PTHR11632:SF59|SSF51905|SSF56425 BPTD_RS17815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS17820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850 BPTD_RS17825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00368|PR00411|PTHR11632|PTHR11632:SF59|SSF51905|SSF56425 BPTD_RS17830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF2|SSF52499 BPTD_RS17840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000160|IPR009050|IPR012292|IPR029787 GGDEF domain|Globin-like|Globin/Protoglobin|Nucleotide cyclase GO:0019825|GO:0020037 G3DSA:1.10.490.10|G3DSA:3.30.70.270|PF00990|PF11563|PTHR10799|PTHR10799:SF750|SM00267|SSF46458|SSF55073|TIGR00254 BPTD_RS17845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604 BPTD_RS17875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005532|IPR016187|IPR017806|IPR024775 C-type lectin fold|DinB-like domain|Ergothioneine biosynthesis protein EgtB|Sulfatase-modifying factor enzyme GO:0052699 G3DSA:3.90.1580.10|PF03781|PF12867|PTHR23150|PTHR23150:SF24|SSF109854|SSF56436|TIGR03440 BPTD_RS17880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR017804|IPR019257|IPR029063 Histidine-specific methyltransferase, SAM-dependent|Methyltransferase EgtD-like|S-adenosyl-L-methionine-dependent methyltransferase PF10017|PIRSF018005|PTHR30468|PTHR30468:SF6|SSF53335|TIGR03438 BPTD_RS17890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001736|IPR025202 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|PTHR21248|PTHR21248:SF5|SM00155|SSF56024 BPTD_RS17895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS17905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002932|IPR013785|IPR024188|IPR027283 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase large subunit-like protein|Glutamate synthase large subunit-like protein, bacteria GO:0003824|GO:0006537|GO:0015930|GO:0016638|GO:0055114 G3DSA:3.20.20.70|PF01645|PIRSF006429|PIRSF500060|PTHR11938|PTHR11938:SF50|SSF51395 BPTD_RS17910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007272 Sulphur transport domain PF04143|PTHR30574|PTHR30574:SF5 BPTD_RS17915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547|PTHR36838 BPTD_RS17920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|PTHR13355|PTHR13355:SF8|SSF55729 BPTD_RS17930 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005636 DTW PF03942|PTHR21392|SM01144 BPTD_RS17940 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003029|IPR004476|IPR011129|IPR011805|IPR012340|IPR013223|IPR022966|IPR022967 Cold shock protein|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease B, N-terminal OB domain|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PF08206|PS01175|PTHR23355|PTHR23355:SF9|SM00316|SM00357|SM00955|SSF50249|TIGR00358|TIGR02063 BPTD_RS17945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001537|IPR004441|IPR013123|IPR024915|IPR029026|IPR029028|IPR029064 23S rRNA (guanosine-2-O-)-methyltransferase RlmB|50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|MF_01887|PF00588|PF08032|PTHR12029|SM00967|SSF55315|SSF75217|TIGR00186 BPTD_RS17950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000277|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PTHR11808|SSF53383 BPTD_RS17955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005123|IPR006620|IPR023550 Oxoglutarate/iron-dependent dioxygenase|PKHD-type hydroxylase|Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016491|GO:0016705|GO:0016706|GO:0031418|GO:0055114 MF_00657|PF13640|PTHR41536|PTHR41536:SF1|SM00702 BPTD_RS17960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|PTHR33175|SM00411|SSF47729 BPTD_RS17970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003538|IPR006260 Gram-negative bacterial TonB protein|TonB, C-terminal GO:0006810|GO:0015343|GO:0015891|GO:0030288|GO:0031992 G3DSA:3.30.1150.10|PF03544|PR01374|SSF74653|TIGR01352 BPTD_RS17975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|PTHR30625:SF3 BPTD_RS17980 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 BPTD_RS17985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF279|SM00448|SM00862|SSF52172 BPTD_RS17990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 BPTD_RS17995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705|PTHR30540|PTHR30540:SF36 BPTD_RS18000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001518|IPR014729|IPR018223|IPR023437|IPR024073|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 2 subfamily|Argininosuccinate synthetase mutimerisation domain, C-terminal tail|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526|GO:0042803 G3DSA:1.10.287.400|G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00581|PF00764|PS00564|PS00565|PTHR11587|PTHR11587:SF2|SSF52402|SSF69864|TIGR00032 BPTD_RS18005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|PTHR11405|PTHR11405:SF1|SSF53671|TIGR00658 BPTD_RS18010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PS00600|PTHR11986|PTHR11986:SF79|SSF53383|TIGR00707 BPTD_RS18015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021969 Protein of unknown function DUF3579 PF12112 BPTD_RS18020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF11|SSF46785|SSF53850 BPTD_RS18025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24322|PTHR24322:SF456|SSF51735 BPTD_RS18030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006139|IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PTHR10996|PTHR10996:SF152|SSF51735|SSF52283 BPTD_RS18035 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS18045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|SM01130|SSF51569 BPTD_RS18050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS18055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR010921|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074|GO:0043565 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF48295|SSF53098 BPTD_RS18060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|SSF103473 BPTD_RS18065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003313|IPR009057|IPR011051|IPR014710|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|PR00032|PS00041|PTHR11019|PTHR11019:SF99|SM00342|SSF46689|SSF51182 BPTD_RS18070 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003779|IPR004674|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0006979|GO:0032843|GO:0051920|GO:0055114 G3DSA:1.20.1290.10|MF_01676|PF02627|SSF69118|TIGR00778 BPTD_RS18075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|PTHR10681:SF87|SSF52833 BPTD_RS18080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|SM00387|SM00388|SSF47384|SSF55874 BPTD_RS18090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF292|SM00448|SM00862|SSF46894|SSF52172 BPTD_RS18095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000182|IPR000905|IPR006464|IPR016181|IPR022496 Acyl-CoA N-acyltransferase|GNAT domain|Gcp-like domain|Ribosomal-protein-alanine acetyltransferase|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949|GO:0006474|GO:0008080|GO:0016407 G3DSA:3.30.420.40|G3DSA:3.40.630.30|PF00814|PF13673|PTHR11735|PTHR11735:SF11|SSF53067|SSF55729|TIGR01575|TIGR03725 BPTD_RS18100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005122|IPR005273 Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PTHR33693|PTHR33693:SF1|SM00986|SM00987|SSF52141|TIGR00758 BPTD_RS18105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23513|PTHR23513:SF8|SSF103473 BPTD_RS18110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003395|IPR010935|IPR011890|IPR024704|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal|SMCs flexible hinge|Structural maintenance of chromosomes protein|Structural maintenance of chromosomes protein, prokaryotic GO:0005515|GO:0005524|GO:0005694|GO:0007062|GO:0030261|GO:0051276 G3DSA:3.40.50.300|MF_01894|PF02463|PF06470|PIRSF005719|PTHR18937|PTHR18937:SF261|SM00968|SSF52540|SSF75553|TIGR02168 BPTD_RS18115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 G3DSA:3.30.1400.10|PF04354|SM00771|SSF64383 BPTD_RS18120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001357|IPR001679|IPR003583|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR033136 BRCT domain|Helix-hairpin-helix DNA-binding motif, class 1|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003677|GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03119|PF03120|PF12826|PF14520|PIRSF001604|PS01055|PS01056|PTHR23389|PTHR23389:SF9|SM00278|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 BPTD_RS18125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site G3DSA:3.10.50.40|PF13616|PF13624|PS01096|PTHR10657|PTHR10657:SF11|SSF54534 BPTD_RS18130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002634 BolA protein G3DSA:3.30.70.1500|PF01722|PIRSF003113|PTHR12735|PTHR12735:SF24|SSF82657 BPTD_RS18135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006008 Intracellular septation protein A GO:0016021 MF_00189|PF04279|PTHR36917|PTHR36917:SF1|TIGR00997 BPTD_RS18140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB GO:0006979|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|MF_01400|PF01641|PTHR10173|PTHR10173:SF18|SSF51316|TIGR00357 BPTD_RS18145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF66|SM00382|SSF52540 BPTD_RS18150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003339 ABC/ECF transporter, transmembrane component PF02361|PTHR33514 BPTD_RS18155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 PF02632|PIRSF016661|PTHR34295|PTHR34295:SF2 BPTD_RS18160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF7|SSF53822 BPTD_RS18165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF402 BPTD_RS18170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851|IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter, permease|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PTHR24220|PTHR24220:SF525|SM00382|SSF52540 BPTD_RS18175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|SSF56752 BPTD_RS18180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 G3DSA:3.40.190.10|G3DSA:3.40.190.100|PF04069|PTHR30177|PTHR30177:SF14|SSF53850 BPTD_RS18185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF8 BPTD_RS18190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF379 BPTD_RS18195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF17|SSF53822 BPTD_RS18200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF469|SM00382|SSF52540 BPTD_RS18205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF400|SM00382|SSF52540 BPTD_RS18210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PF10576|PIRSF001435|PS00764|PS01155|PTHR10359|PTHR10359:SF18|SM00478|SM00525|SSF48150|TIGR01083 BPTD_RS18215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007202|IPR010207|IPR017900 4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF04060|PF14697|PS00198|PTHR11938|PTHR11938:SF64|SSF54862|TIGR01944 BPTD_RS18220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009656|IPR010915|IPR029058 Alpha/Beta hydrolase fold|PHB de-polymerase, C-terminal|Polyhydroxyalkanoate depolymerase G3DSA:3.40.50.1820|PF06850|PIRSF020818|SSF53474|TIGR01849 BPTD_RS18225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001221|IPR001433|IPR001709|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PR00371|PR00410|PTHR19370|PTHR19370:SF98|SSF52343|SSF63380 BPTD_RS18230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000813|IPR017896|IPR017900|IPR022569 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin|Ferredoxin, C-terminal GO:0009055 G3DSA:3.30.70.20|PF00037|PF11953|PR00354|PS00198|PTHR11938|PTHR11938:SF101|SSF54862 BPTD_RS18235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002638|IPR006406|IPR007229 Nicotinate phosphoribosyltransferase|Nicotinate phosphoribosyltransferase family|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019357 G3DSA:3.20.140.10|MF_00570|PF04095|PIRSF000484|PTHR11098|PTHR11098:SF16|SSF51690|SSF54675|TIGR01514 BPTD_RS18240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|PTHR11803|PTHR11803:SF17|SSF55298 BPTD_RS18245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 BPTD_RS18250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010384|IPR024079 Metallopeptidase, catalytic domain|MtfA family GO:0008237 G3DSA:3.40.390.10|PF06167|PTHR30164|SSF55486 BPTD_RS18255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF5|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 BPTD_RS18260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001261|IPR002933|IPR010169|IPR011650 Acetylornithine deacetylase (ArgE)|ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain GO:0005737|GO:0006508|GO:0006526|GO:0008152|GO:0008237|GO:0008270|GO:0008777|GO:0016787|GO:0050897 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PS00759|PTHR11014|PTHR11014:SF80|SSF53187|SSF55031|TIGR01892 BPTD_RS18265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001926|IPR006653|IPR006654|IPR023026 Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|PTHR10314|PTHR10314:SF3|SSF53686|TIGR00263 BPTD_RS18270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002028|IPR011060|IPR013785|IPR018204 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site GO:0003824|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|PTHR10314|PTHR10314:SF4|SSF51366|TIGR00262 BPTD_RS18275 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000022|IPR000438|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_01395|PF01039|PR01070|PTHR22855|PTHR22855:SF17|SSF52096|TIGR00515 BPTD_RS18285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS18290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000489|IPR003726|IPR003759|IPR004223|IPR006158|IPR011005|IPR011822 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Cobalamin-dependent methionine synthase|Dihydropteroate synthase-like|Homocysteine-binding domain|Pterin-binding domain|Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:3.10.196.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PF02965|PIRSF000381|PTHR21091|PTHR21091:SF111|SM01018|SSF47644|SSF51717|SSF52242|SSF56507|SSF82282|TIGR02082 BPTD_RS18295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR30069|PTHR30069:SF2|SSF56935 BPTD_RS18300 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|SSF53807 BPTD_RS18305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008867|IPR013785 Aldolase-type TIM barrel|Thiazole biosynthesis GO:0003824|GO:0009228 G3DSA:3.20.20.70|MF_00443|PF05690|PTHR34266|PTHR34266:SF2|SSF110399 BPTD_RS18310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|PTHR20858|PTHR20858:SF17|SSF53613|TIGR00097 BPTD_RS18315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|PF01135|PTHR11579|SSF53335 BPTD_RS18320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|SSF56954 BPTD_RS18325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF3|SSF56954|TIGR01844 BPTD_RS18330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004821|IPR011914|IPR014729 Cytidyltransferase-like domain|RfaE bifunctional protein, domain II|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0005975|GO:0009058|GO:0016773|GO:0016779 G3DSA:3.40.50.620|PF01467|PTHR10739|PTHR10739:SF26|SSF52374|TIGR00125|TIGR02199 BPTD_RS18335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 BPTD_RS18340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF12 BPTD_RS18345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008775 Phytanoyl-CoA dioxygenase G3DSA:2.60.120.620|PF05721|PTHR20883|PTHR20883:SF0|SSF51197 BPTD_RS18350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003148|IPR013099|IPR016040 NAD(P)-binding domain|Potassium channel domain|Regulator of K+ conductance, N-terminal GO:0006813 G3DSA:1.10.287.70|G3DSA:3.40.50.720|PF02254|PF07885|PTHR16254|PTHR16254:SF27|SSF51735|SSF81324 BPTD_RS18355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS18360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacteria|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|PTHR11652|SSF50249|TIGR00981 BPTD_RS18365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|PTHR11205|SSF47973|TIGR01029 BPTD_RS18370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 BPTD_RS18375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF151|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 BPTD_RS18380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|PTHR11700|SM01403|SSF54999|TIGR01049 BPTD_RS18385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|PTHR11229|SSF50447|TIGR03625 BPTD_RS18390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|PTHR10746|SSF52166|TIGR03953 BPTD_RS18395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|PTHR11620|SSF54189 BPTD_RS18400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|PTHR13691|PTHR13691:SF5|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 BPTD_RS18405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|PTHR11880|SSF54570|TIGR01050 BPTD_RS18410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001063|IPR005727|IPR018260 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|PTHR13501|SSF54843|TIGR01044 BPTD_RS18415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|PTHR11760|PTHR11760:SF19|SM00322|SSF54814|SSF54821|TIGR01009 BPTD_RS18420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|PTHR12220|SSF54686|TIGR01164 BPTD_RS18425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001854|IPR018254 Ribosomal protein L29|Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|PTHR10916|SSF46561|TIGR00012 BPTD_RS18430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|PTHR10744|SSF50249|TIGR03635 BPTD_RS18435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PTHR10992|PTHR10992:SF771|SSF53474 BPTD_RS18440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PTHR11699|SSF53720 BPTD_RS18450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|PTHR11761|SM01374|SSF50193|TIGR01067 BPTD_RS18455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003256|IPR005825|IPR008991|IPR014722 Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF17136|PS01108|PTHR12903|SSF50104|TIGR01079 BPTD_RS18460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|PTHR11994|SSF55282 BPTD_RS18465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001209|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|PTHR19836|SSF57716 BPTD_RS18470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|PTHR11758|SSF56047 BPTD_RS18475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|PTHR11655|PTHR11655:SF14|SSF56053|TIGR03654 BPTD_RS18480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|PTHR12899|SSF53137|TIGR00060 BPTD_RS18485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000851|IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|PTHR13718|SSF54211|SSF54768|TIGR01021 BPTD_RS18490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005996|IPR016082|IPR018038 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, conserved site|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PS00634|PTHR15892|SSF55129|TIGR01308 BPTD_RS18495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L18e/L15P GO:0003735|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PTHR12934|SSF52080|TIGR01071 BPTD_RS18500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|PTHR10906|PTHR10906:SF2|SSF103491|TIGR00967 BPTD_RS18505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004368|IPR006196|IPR012340 Nucleic acid-binding, OB-fold|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|PTHR33370|SSF50249|TIGR00008 BPTD_RS18510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PD002101|PF00444|PS00828|PTHR18804|SSF57840|TIGR01022 BPTD_RS18515 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|PTHR10871|SSF46946|TIGR03631 BPTD_RS18520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|PTHR11759|SSF53137|TIGR03632 BPTD_RS18525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR022801 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|PTHR11831|PTHR11831:SF4|SM00363|SM01390|SSF55174|TIGR01017 BPTD_RS18530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|PTHR32108|PTHR32108:SF0|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 BPTD_RS18535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|PTHR14413|SSF64263|TIGR00059 BPTD_RS18545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004323|IPR011322 Divalent ion tolerance protein, CutA|Nitrogen regulatory PII-like, alpha/beta GO:0010038 G3DSA:3.30.70.830|PF03091|PTHR23419|SSF54913 BPTD_RS18550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003834|IPR012336|IPR017937|IPR022910|IPR028250 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thiol:disulphide interchange protein DsbD|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016020|GO:0017004|GO:0045454|GO:0047134|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|MF_00399|PF02683|PF11412|PF13899|PS00194|PTHR32234|PTHR32234:SF0|SSF52833|SSF74863 BPTD_RS18555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|SSF103481 BPTD_RS18560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|PTHR11458|SM01004|SSF51569 BPTD_RS18565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0000917|GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|PTHR11649|SSF52540|TIGR03598 BPTD_RS18570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF00034|PIRSF000005|PTHR33751|PTHR33751:SF3|SSF46626 BPTD_RS18575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007816 ResB-like domain PF05140|PTHR31566|PTHR31566:SF0 BPTD_RS18580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002541|IPR017562 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcsA GO:0017004|GO:0020037 PF01578|PTHR30071|TIGR03144 BPTD_RS18585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00879|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419|TIGR01048 BPTD_RS18590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002908|IPR020895 Frataxin conserved site|Frataxin/CyaY GO:0008199|GO:0016226 G3DSA:3.30.920.10|MF_00142|PF01491|PS01344|SM01219|SSF55387|TIGR03421 BPTD_RS18595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001264|IPR001460|IPR012338|IPR012340|IPR023346|IPR031376 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Nucleic acid-binding, OB-fold|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:2.40.50.140|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601|TIGR02074 BPTD_RS18600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000623|IPR023000|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PS01128|PTHR21087|SSF52540 BPTD_RS18605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|PTHR21090|SSF56796|TIGR01357 BPTD_RS18610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003607|IPR006261|IPR006674|IPR023023|IPR026875 Deoxyguanosinetriphosphate triphosphohydrolase|Deoxyguanosinetriphosphate triphosphohydrolase, type 2|HD domain|HD/PDEase domain|Phosphohydrolase-associated domain GO:0000287|GO:0008832|GO:0046039 G3DSA:1.10.3210.10|MF_01212|PF01966|PF13286|PTHR11373|PTHR11373:SF25|SM00471|SSF109604|TIGR01353 BPTD_RS18615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|PTHR11260|PTHR11260:SF144|SSF47616|SSF52833 BPTD_RS18620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|MF_00205|PS00211|PTHR32282|PTHR32282:SF2|SSF52540|TIGR00630 BPTD_RS18625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23504|PTHR23504:SF37|SSF103473 BPTD_RS18630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PTHR10302|SSF50249|TIGR00621 BPTD_RS18635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF10|SSF56935|TIGR01783 BPTD_RS18640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011051|IPR014710|IPR025979 ChrR-like cupin domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF12973|SSF51182 BPTD_RS18645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005000|IPR015813 HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PTHR30502|PTHR30502:SF0|SSF51621 BPTD_RS18650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005000|IPR015813 HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PTHR30502|SSF51621 BPTD_RS18655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS18660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288 BPTD_RS18665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30118|PTHR30118:SF8|SSF46785|SSF53850 BPTD_RS18670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|SSF51338|SSF51556 BPTD_RS18675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 BPTD_RS18680 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 BPTD_RS18685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR019647 PhoP regulatory network protein YrbL PF10707 BPTD_RS18690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|SSF46785|SSF53850 BPTD_RS18695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168|IPR019546 SsuA/THI5-like|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850|TIGR01409 BPTD_RS18700 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF0|SSF161098 BPTD_RS18705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 BPTD_RS18710 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF196|SSF51905 BPTD_RS18720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PTHR30055|SSF46689|SSF48498 BPTD_RS18725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001465|IPR006253|IPR011076|IPR023310 Malate synthase|Malate synthase G|Malate synthase G, beta sub-domain|Malate synthase-like GO:0003824|GO:0004474|GO:0006097 G3DSA:1.10.1860.10|G3DSA:1.20.1220.12|G3DSA:2.170.170.11|G3DSA:3.20.20.360|MF_00641|PF01274|PTHR21631|PTHR21631:SF7|SSF51645|TIGR01345 BPTD_RS18730 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF277|SM00345|SM00895|SSF46785|SSF48008 BPTD_RS18735 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005097|IPR016040|IPR032095 NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF03435|PF16653|SSF51735|SSF55347 BPTD_RS18740 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR025421 Protein of unknown function DUF4148 PF13663 BPTD_RS18745 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000537|IPR006370|IPR030470|IPR031103 4-hydroxybenzoate octaprenyltransferase|4-hydroxybenzoate polyprenyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0006744|GO:0016021 MF_01635|PF01040|PS00943|PTHR11048|PTHR11048:SF28|TIGR01474 BPTD_RS18750 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF294|SSF53383 BPTD_RS18755 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003018|IPR029016 GAF domain|GAF domain-like GO:0005515 G3DSA:3.30.450.40|PF13185|PTHR21021|SSF55781 BPTD_RS18760 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002220|IPR013785|IPR020624|IPR020625 Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PS00665|PS00666|PTHR12128|PTHR12128:SF34|SM01130|SSF51569 BPTD_RS18765 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS18770 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007055|IPR018392 BON domain|LysM domain G3DSA:3.10.350.10|PF01476|PF04972|PTHR34700|SM00257|SSF54106 BPTD_RS18775 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR34472|PTHR34472:SF1|SSF54285|TIGR01683 BPTD_RS18780 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000073|IPR002410|IPR005944|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33|Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PIRSF006431|PR00793|PTHR10992|PTHR10992:SF860|SSF53474|TIGR01249 BPTD_RS18785 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|PTHR23417|PTHR23417:SF14|SSF53335|TIGR00091 BPTD_RS18790 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30419|PTHR30419:SF2|SSF46785|SSF53850 BPTD_RS18800 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000891|IPR013785 Aldolase-type TIM barrel|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|PTHR10277|PTHR10277:SF1|SSF51569 BPTD_RS18805 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS18815 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS18820 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PTHR11751|PTHR11751:SF364|SM00345|SSF46785|SSF64288 BPTD_RS18825 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS18830 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638|IPR015168 Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SM00062|SSF53850 BPTD_RS18835 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PTHR11751|PTHR11751:SF364|SM00345|SSF46785|SSF64288 BPTD_RS18840 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF0|SSF161098 BPTD_RS18845 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850 BPTD_RS18850 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF457|SM00382|SSF52540 BPTD_RS18855 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096 BPTD_RS18860 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS18865 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF31|SM00829|SSF50129|SSF51735 BPTD_RS18870 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS18875 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|PTHR30055:SF56|SSF46689|SSF48498 BPTD_RS18880 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000086|IPR015376|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 G3DSA:3.90.79.10|PF00293|PF09297|PS00893|PTHR22769|PTHR22769:SF7|SSF55811 BPTD_RS18885 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000951|IPR001041|IPR001433|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00409|PS00197|PTHR22924|PTHR22924:SF20|SSF52343|SSF54292|SSF63380 BPTD_RS18890 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|SSF75304 BPTD_RS18895 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR016040 Alcohol dehydrogenase superfamily, zinc-type|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PTHR11695|SSF51735 BPTD_RS18900 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|SSF46785|SSF53850 BPTD_RS18905 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF18|SSF53822 BPTD_RS18910 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009499|IPR024033 Protein of unknown function DUF1116|Uncharacterised domain, YlbE G3DSA:1.10.10.660|G3DSA:3.90.1700.10|G3DSA:3.90.1710.10|PF06545 BPTD_RS18915 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 BPTD_RS18920 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482 BPTD_RS18925 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF398 BPTD_RS18935 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR015881|IPR017941 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0016491|GO:0016705|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PS00570|PTHR21266|PTHR21266:SF23|SSF50022|SSF55961 BPTD_RS18945 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011213|IPR011991|IPR015797 NUDIX hydrolase domain-like|Nicotinic acid mononucleotide biosynthesis protein|Winged helix-turn-helix DNA-binding domain GO:0016787 G3DSA:1.10.10.10|G3DSA:3.90.79.10|PIRSF019423|SSF46785|SSF55811 BPTD_RS18950 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|PTHR32179|SSF51690|SSF54675|TIGR00078 BPTD_RS18955 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS18960 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 BPTD_RS18965 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|PTHR11374|PTHR11374:SF18|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 BPTD_RS18970 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|PTHR23501|PTHR23501:SF5|SSF103473 BPTD_RS18975 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001451|IPR005882|IPR011004|IPR018357|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0016740|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PS00101|PTHR22572|PTHR22572:SF115|SSF51161|SSF53448|TIGR01173 BPTD_RS18985 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008816 Glycine zipper 2TM domain GO:0019867 PF05433|PTHR35603|PTHR35603:SF2 BPTD_RS18990 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR022191 Protein of unknown function DUF3717 PF12512 BPTD_RS18995 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|PTHR12151|SSF52833 BPTD_RS19000 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000537|IPR006369 Protohaem IX farnesyltransferase|UbiA prenyltransferase family GO:0004659|GO:0008495|GO:0016021|GO:0048034 MF_00154|PF01040|PTHR11048|TIGR01473 BPTD_RS19005 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 PF02628|PTHR35457|PTHR35457:SF1 BPTD_RS19010 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 BPTD_RS19015 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104 BPTD_RS19020 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021313 Protein of unknown function DUF2909 PF11137 BPTD_RS19025 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000298|IPR013833|IPR024791 Cytochrome c oxidase subunit III|Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.10.287.70|G3DSA:1.20.120.80|PF00510|PTHR11403|PTHR11403:SF0|SSF81452 BPTD_RS19030 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021344 Protein of unknown function DUF2970 PF11174 BPTD_RS19040 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000883|IPR014241|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I bacterial type|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0005507|GO:0005886|GO:0006810|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0022900|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PTHR10422|PTHR10422:SF27|SSF81442|TIGR02891 BPTD_RS19045 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001505|IPR002429|IPR008972|IPR009056|IPR011759|IPR014222 Copper centre Cu(A)|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome c oxidase, subunit II|Cytochrome c-like domain GO:0004129|GO:0005507|GO:0009055|GO:0016020|GO:0016021|GO:0016491|GO:0020037|GO:0022900 G3DSA:1.10.287.90|G3DSA:1.10.760.10|G3DSA:2.60.40.420|PF00116|PF02790|PF13442|PR01166|PS00078|PTHR22888|PTHR22888:SF2|SSF46626|SSF49503|SSF81464|TIGR02866 BPTD_RS19050 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR13622|PTHR13622:SF8|SSF55811 BPTD_RS19055 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000595|IPR006153|IPR014710|IPR018422|IPR018490 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold GO:0006812|GO:0015299|GO:0016021|GO:0055085 G3DSA:2.60.120.10|PF00027|PF00999|PTHR10110|PTHR10110:SF86|SM00100|SSF51206 BPTD_RS19060 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004843|IPR013622|IPR026575|IPR029052 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal|3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PD587589|PF00149|PTHR12905|PTHR12905:SF7|SSF56300 BPTD_RS19065 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR011991|IPR012759|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006351|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00961|PF00140|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PS00716|PTHR30376|SSF88659|SSF88946|TIGR02392|TIGR02937 BPTD_RS19075 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000801|IPR014186|IPR029058 Alpha/Beta hydrolase fold|Putative esterase|S-formylglutathione hydrolase GO:0018738|GO:0046294 G3DSA:3.40.50.1820|PF00756|PTHR10061|SSF53474|TIGR02821 BPTD_RS19080 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR014183|IPR016040|IPR020843 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0006069|GO:0008270|GO:0016491|GO:0051903|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF560|SM00829|SSF50129|SSF51735|TIGR02818 BPTD_RS19085 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 SSF143422 BPTD_RS19090 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0008152|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|PTHR11938|PTHR11938:SF1|SSF51395|SSF56235|SSF69336 BPTD_RS19095 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006005|IPR009051|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016491|GO:0016639|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|PTHR11938|PTHR11938:SF75|SSF46548|SSF51971|TIGR01317 BPTD_RS19100 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005618|IPR011250 Outer membrane protein, OmpW|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021|GO:0019867 G3DSA:2.40.160.20|PF03922|PTHR36920|PTHR36920:SF1|SSF56925 BPTD_RS19105 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS19110 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF368|SM00382|SSF52540 BPTD_RS19115 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|PTHR30188|PTHR30188:SF4|TIGR00056 BPTD_RS19120 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003399|IPR030970 Mce/MlaD|Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PF02470|PTHR33371|TIGR04430 BPTD_RS19125 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805|PTHR30035|PTHR30035:SF3 BPTD_RS19130 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649|PTHR36573 BPTD_RS19135 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF305|SSF52540 BPTD_RS19140 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164|PTHR30413|PTHR30413:SF2 BPTD_RS19145 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002634 BolA protein G3DSA:3.30.300.90|PF01722|PIRSF003113|PTHR12735|SSF82657 BPTD_RS19150 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|PTHR21090|SSF55205|TIGR01072 BPTD_RS19155 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001348|IPR013820|IPR018198|IPR024893 ATP phosphoribosyltransferase HisG|ATP phosphoribosyltransferase HisG, short form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site GO:0000105|GO:0003879|GO:0005737 G3DSA:3.40.190.10|MF_01018|PF01634|PS01316|PTHR21403|PTHR21403:SF3|SSF53850|TIGR00070 BPTD_RS19160 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|PTHR21256|SSF53720|TIGR00069 BPTD_RS19165 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PTHR11751|PTHR11751:SF398|SSF53383|TIGR01141 BPTD_RS19170 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000807|IPR020565|IPR020568 Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|PS00955|PTHR23133|PTHR23133:SF2|SSF54211 BPTD_RS19175 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|PTHR21235|PTHR21235:SF1|SSF52317|TIGR01855 BPTD_RS19180 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006062|IPR006063|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949|GO:0008152 G3DSA:3.20.20.70|MF_01014|PF00977|PTHR21235|PTHR21235:SF15|SSF51366|TIGR00007 BPTD_RS19185 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01013|PF00977|PTHR21235|PTHR21235:SF2|SSF51366|TIGR00735 BPTD_RS19190 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|PTHR21256|SSF141734 BPTD_RS19195 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008179|IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004636 MF_01020|PF01503|PTHR21256|SSF101386|TIGR03188 BPTD_RS19200 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001310|IPR011146|IPR019808 HIT-like domain|Histidine triad (HIT) protein|Histidine triad, conserved site GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|PS00892|PTHR23089|PTHR23089:SF2|SSF54197 BPTD_RS19205 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|PTHR33162|TIGR01411 BPTD_RS19210 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003369|IPR003998|IPR018448 Sec-independent protein translocase protein TatA/B/E|Twin-arginine translocation protein TatB|Twin-arginine translocation protein TatB-like GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0043953 MF_00237|PF02416|PR01506|PTHR33162|PTHR33162:SF4|TIGR01410 BPTD_RS19215 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MF_00902|PF00902|PR01840|PTHR30371|PTHR30371:SF0|TIGR00945 BPTD_RS19220 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001387|IPR001584|IPR010982|IPR012337 Cro/C1-type helix-turn-helix domain|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF13560|PF13683|SM00530|SSF47413|SSF53098 BPTD_RS19225 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF16|SSF53850 BPTD_RS19230 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 G3DSA:3.90.210.10|PF02917|PR01395|SSF56399 BPTD_RS19235 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003899|IPR005138|IPR008992|IPR016187|IPR020063 Aerolysin/Pertussis toxin APT|Bordetella pertussis toxin B|Bordetella pertussis toxin B, subunit 2/3, C-terminal|C-type lectin fold|Enterotoxin GO:0005576|GO:0009405 G3DSA:2.40.50.110|G3DSA:3.10.40.10|PD037992|PF02918|PF03440|PR01396|SSF50203|SSF56436 BPTD_RS19240 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008992|IPR015355 Enterotoxin|Pertussis toxin, subunit S4 GO:0009405 G3DSA:2.40.50.110|PF09275|SSF50203 BPTD_RS19245 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008992|IPR015356 Enterotoxin|Pertussis toxin, subunit S5 GO:0009405 G3DSA:2.40.50.110|PF09276|SSF50203 BPTD_RS19250 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003899|IPR005138|IPR008992|IPR016187|IPR020063 Aerolysin/Pertussis toxin APT|Bordetella pertussis toxin B|Bordetella pertussis toxin B, subunit 2/3, C-terminal|C-type lectin fold|Enterotoxin GO:0005576|GO:0009405 G3DSA:2.40.50.110|G3DSA:3.10.40.10|PD037992|PF02918|PF03440|PR01396|SSF50203|SSF56436 BPTD_RS19255 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 PF04956 BPTD_RS19260 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB PF05101 BPTD_RS19265 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004346|IPR018145|IPR027417 CagE, TrbE, VirB component of type IV transporter system|CagE, TrbE, VirB component of type IV transporter system, central domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF03135|SSF52540|TIGR00929 BPTD_RS19270 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 PF04610 BPTD_RS19280 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007430|IPR026264|IPR032710 Bacterial virulence protein VirB8|NTF2-like domain|Type IV secretion system protein VirB8/PtlE GO:0016020|GO:0030255 PF04335|PIRSF003299|SSF54427 BPTD_RS19285 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010258|IPR014148 Conjugal transfer, TrbG/VirB9/CagX|P-type conjugative transfer protein VirB9 PF03524|TIGR02781 BPTD_RS19290 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PF03743 BPTD_RS19295 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001482|IPR014155|IPR025662|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Sigma-54 interaction domain, ATP-binding site 1|Type II secretion system protein E|Type IV secretion system protein VirB11 GO:0005524|GO:0005737|GO:0006810|GO:0009405 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PS00675|PTHR30258|PTHR30258:SF3|SSF52540|TIGR02788 BPTD_RS19305 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR32322|PTHR32322:SF8|SSF103481 BPTD_RS19310 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|PTHR11019|PTHR11019:SF105|SM00342|SSF46689 BPTD_RS19315 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010652|IPR016983 Protein of unknown function DUF1232|Uncharacterised conserved protein UCP031804 PF06803|PIRSF031804 BPTD_RS19320 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021296 Protein of unknown function DUF2868 PF11067 BPTD_RS19325 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006073|IPR021871|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3482 GO:0005525 G3DSA:3.40.50.300|PF01926|PF11981|SSF52540 BPTD_RS19330 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF24|SSF53850 BPTD_RS19335 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF47|SSF161098 BPTD_RS19340 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF67|SSF161098 BPTD_RS19345 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF336|SSF52540 BPTD_RS19350 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR011991|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.10|G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS19355 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|PTHR23100|PTHR23100:SF0|SSF56266|TIGR00120 BPTD_RS19360 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR008533|IPR027417 Domain of unknown function DUF815|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05673|PTHR13779|PTHR13779:SF28|SSF52540 BPTD_RS19365 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000086|IPR003733|IPR013785|IPR015797|IPR020084|IPR020476|IPR022998 Aldolase-type TIM barrel|NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228|GO:0016787 G3DSA:3.20.20.70|G3DSA:3.90.79.10|PF00293|PF02581|PR00502|PS00893|PTHR22769|PTHR22769:SF35|SSF51391|SSF55811 BPTD_RS19370 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS19375 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS19380 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF7|SSF56954|TIGR01845 BPTD_RS19385 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF34|SSF82693|SSF82714|SSF82866 BPTD_RS19390 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF21|SSF82693|SSF82714|SSF82866 BPTD_RS19395 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR006143|IPR022824 Multidrug resistance protein MdtA|RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PF13533|PTHR30469|PTHR30469:SF12|SSF111369|TIGR01730 BPTD_RS19400 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009777|IPR027462 Cell division protein ZapD|Z ring-associated protein D, C-terminal domain G3DSA:1.10.3900.10|G3DSA:2.60.440.10|MF_01092|PF07072|PTHR39455|PTHR39455:SF1|SSF160950 BPTD_RS19405 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|PTHR10695|SSF52540|TIGR00152 BPTD_RS19410 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000045|IPR010627|IPR014032 Peptidase A24A, N-terminal|Peptidase A24A, prepilin type IV, bacterial|Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478|PF06750|PR00864|PTHR30487|PTHR30487:SF0 BPTD_RS19415 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR007298 Copper resistance lipoprotein NlpE PF04170 BPTD_RS19420 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PTHR26402|SM00421|SSF46894 BPTD_RS19425 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003721|IPR004821|IPR014729 Cytidyltransferase-like domain|Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004592|GO:0009058|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|PTHR21299|PTHR21299:SF1|SSF52374|TIGR00018|TIGR00125 BPTD_RS19430 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003768 Segregation and condensation protein A MF_01805|PF02616|PTHR33969|PTHR33969:SF2 BPTD_RS19435 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR021853 Protein of unknown function DUF3460 PF11943 BPTD_RS19440 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF66|SSF103473|TIGR00711 BPTD_RS19445 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000577|IPR005999|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Glycerol kinase GO:0004370|GO:0005975|GO:0006072|GO:0016773 G3DSA:3.30.420.40|MF_00186|PF00370|PF02782|PIRSF000538|PS00445|PS00933|PTHR10196|PTHR10196:SF9|SSF53067|TIGR01311 BPTD_RS19450 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005265 Uncharacterised protein family UPF0093 PF03653|PIRSF004638 BPTD_RS19455 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS19460 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF490|SM00382|SSF52540 BPTD_RS19465 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30085|PTHR30085:SF3|SSF161098|TIGR01726 BPTD_RS19470 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30085|PTHR30085:SF1|SSF161098|TIGR01726 BPTD_RS19475 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|PTHR30085|PTHR30085:SF5|SM00062|SSF53850 BPTD_RS19480 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF470|SM00382|SSF52540 BPTD_RS19485 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003838|IPR004513 ABC transporter permease protein domain|Cell division protein FtsX GO:0007049|GO:0016020|GO:0016021 PF02687|PIRSF003097 BPTD_RS19490 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005659|IPR011324 Chemoreceptor glutamine deamidase CheD|Cytotoxic necrotizing factor-like, catalytic GO:0006935|GO:0050568 MF_01440|PF03975|PTHR35147|PTHR35147:SF2|SSF64438 BPTD_RS19495 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.30.70.20|G3DSA:3.40.50.970|PF02775|PTHR18968|PTHR18968:SF134|SSF52518 BPTD_RS19500 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000445|IPR003265|IPR004035|IPR004036|IPR005760|IPR011257|IPR015797|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase domain-like GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00633|PF00730|PF14815|PS00764|PS01155|PTHR10359|PTHR10359:SF1|SM00478|SSF48150|SSF55811|TIGR01084 BPTD_RS19505 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|PTHR35010|PTHR35010:SF2|SM00530|SSF47413 BPTD_RS19510 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF835|SSF53335 BPTD_RS19520 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS19525 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS19530 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|PTHR16943|PTHR16943:SF8|SSF103378 BPTD_RS19535 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|PTHR30349|PTHR30349:SF32|SSF53850 BPTD_RS19540 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096 BPTD_RS19545 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|PTHR23026:SF90|SSF55469 BPTD_RS19550 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|SSF46689|SSF48498 BPTD_RS19555 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000891|IPR013785 Aldolase-type TIM barrel|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|PTHR10277|PTHR10277:SF1|SSF51569 BPTD_RS19560 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|SSF52096 BPTD_RS19565 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 BPTD_RS19570 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PTHR30349|PTHR30349:SF32 BPTD_RS19575 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098 BPTD_RS19580 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002226|IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024711 Catalase active site|Catalase core domain|Catalase haem-binding site|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clades 1 and 3|Catalase-like domain GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PF06628|PIRSF038928|PR00067|PS00437|PS00438|PTHR11465|SM01060|SSF56634 BPTD_RS19585 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF16|SSF161098 BPTD_RS19590 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF422|SM00382|SSF52540 BPTD_RS19595 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic PF13379|PTHR30024|PTHR30024:SF2|SSF53850 BPTD_RS19600 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|PTHR30468|PTHR30468:SF18|SSF51197 BPTD_RS19605 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 BPTD_RS19610 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR027417 AAA+ ATPase domain|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PTHR24220|PTHR24220:SF336|SM00382|SSF52540|TIGR01727 BPTD_RS19615 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF535|SM00382|SSF52540|TIGR01727 BPTD_RS19620 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF67|SSF161098 BPTD_RS19625 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 BPTD_RS19630 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|SSF53850 BPTD_RS19635 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|PR00326|PTHR11649|PTHR11649:SF56|SSF116878|SSF52540|TIGR00231|TIGR00450 BPTD_RS19640 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BPTD_RS19645 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF518|SM00448|SM00862|SSF52172 BPTD_RS19650 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 BPTD_RS19655 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF29|SSF53850 BPTD_RS19660 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR009936 Protein of unknown function DUF1468 PF07331 BPTD_RS19665 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970|PTHR35342|PTHR35342:SF4 BPTD_RS19670 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF301|SSF53383 BPTD_RS19675 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 BPTD_RS19685 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 BPTD_RS19690 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR004681|IPR007387|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein|Tripartite ATP-independent periplasmic transporter, DctQ component GO:0016021 PF04290|PF06808|PTHR33362|PTHR33362:SF5|TIGR00786 BPTD_RS19695 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010994 RuvA domain 2-like G3DSA:1.10.150.280|PF12836|PTHR21180|SSF47781 BPTD_RS19705 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR010839 Protein of unknown function DUF1446 PF07287|PTHR13943|PTHR13943:SF48 BPTD_RS19720 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF586|SM00382|SSF52540|TIGR01727 BPTD_RS19725 /var/genomes/g2d_mirror/Bordetella_pertussis_CS/ASM21297v1_genomic IPR001584|IPR009057|IPR010982|IPR012337|IPR024967 DNA-binding domain, IS481-type|Homeodomain-like|Integrase, catalytic core|Lambda repressor-like, DNA-binding domain|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.260.40|G3DSA:3.30.420.10|PF00665|PF13011|PTHR24559|SSF46689|SSF53098