WU04_RS00005	SM01228	WU04_RS00005
WU04_RS00025	SM00470	ParB-like nuclease domain
WU04_RS00030	SM00870	WU04_RS00030
WU04_RS00070	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
WU04_RS00070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
WU04_RS00075	SM00649	Ribosomal protein L11/L12
WU04_RS00100	SM00663	RNA polymerase I subunit A N-terminus
WU04_RS00130	SM00448	cheY-homologous receiver domain
WU04_RS00130	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS00200	SM00563	Phosphate acyltransferases
WU04_RS00240	SM00421	helix_turn_helix, Lux Regulon
WU04_RS00290	SM00382	ATPases associated with a variety of cellular activities
WU04_RS00305	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS00400	SM00387	Histidine kinase-like ATPases
WU04_RS00410	SM00644	WU04_RS00410
WU04_RS00425	SM00382	ATPases associated with a variety of cellular activities
WU04_RS00425	SM00962	SRP54-type protein, GTPase domain
WU04_RS00425	SM00963	SRP54-type protein, helical bundle domain
WU04_RS00530	SM00382	ATPases associated with a variety of cellular activities
WU04_RS00550	SM00936	Penicillin-binding protein 5, C-terminal domain 
WU04_RS00570	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU04_RS00615	SM00836	DALR anticodon binding domain
WU04_RS00615	SM01016	Arginyl tRNA synthetase N terminal dom
WU04_RS00650	SM00382	ATPases associated with a variety of cellular activities
WU04_RS00665	SM00382	ATPases associated with a variety of cellular activities
WU04_RS00700	SM00917	LeuA allosteric (dimerisation) domain
WU04_RS00755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS00755	SM00895	WU04_RS00755
WU04_RS00785	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS00795	SM00797	Allophanate hydrolase subunit 2
WU04_RS00800	SM00796	Allophanate hydrolase subunit 1
WU04_RS00825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS00825	SM00387	Histidine kinase-like ATPases
WU04_RS00825	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS00830	SM00448	cheY-homologous receiver domain
WU04_RS00830	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS00835	SM00091	PAS domain
WU04_RS00835	SM00387	Histidine kinase-like ATPases
WU04_RS00835	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS00840	SM00448	cheY-homologous receiver domain
WU04_RS00840	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS00850	SM00978	WU04_RS00850
WU04_RS00875	SM00382	ATPases associated with a variety of cellular activities
WU04_RS00890	SM00487	DEAD-like helicases superfamily
WU04_RS00890	SM00490	helicase superfamily c-terminal domain
WU04_RS00935	SM00450	Rhodanese Homology Domain
WU04_RS01030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS01030	SM00895	WU04_RS01030
WU04_RS01080	SM00882	Coenzyme A transferase
WU04_RS01085	SM00882	Coenzyme A transferase
WU04_RS01090	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS01110	SM00869	Autotransporter beta-domain
WU04_RS01145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS01145	SM00895	WU04_RS01145
WU04_RS01215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS01215	SM00895	WU04_RS01215
WU04_RS01255	SM00382	ATPases associated with a variety of cellular activities
WU04_RS01270	SM00853	MutL C terminal dimerisation domain
WU04_RS01270	SM01340	WU04_RS01270
WU04_RS01280	SM00646	WU04_RS01280
WU04_RS01360	SM00382	ATPases associated with a variety of cellular activities
WU04_RS01365	SM00382	ATPases associated with a variety of cellular activities
WU04_RS01450	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU04_RS01480	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS01490	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS01540	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU04_RS01565	SM00382	ATPases associated with a variety of cellular activities
WU04_RS01570	SM00382	ATPases associated with a variety of cellular activities
WU04_RS01640	SM00732	Likely ribonuclease with RNase H fold.
WU04_RS01655	SM00563	Phosphate acyltransferases
WU04_RS01705	SM00849	Metallo-beta-lactamase superfamily
WU04_RS01735	SM00267	diguanylate cyclase
WU04_RS01760	SM00382	ATPases associated with a variety of cellular activities
WU04_RS01780	SM00965	Secretin and TonB N terminus short domain
WU04_RS01825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS01825	SM00895	WU04_RS01825
WU04_RS01840	SM01236	WU04_RS01840
WU04_RS01860	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS01885	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
WU04_RS01900	SM00845	GatB domain
WU04_RS01975	SM00749	bacterial OsmY and nodulation domain
WU04_RS02040	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS02080	SM00450	Rhodanese Homology Domain
WU04_RS02185	SM00479	WU04_RS02185
WU04_RS02215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS02220	SM00838	Elongation factor G C-terminus
WU04_RS02220	SM00889	Elongation factor G, domain IV
WU04_RS02290	SM00357	Cold shock protein domain
WU04_RS02300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS02300	SM00895	WU04_RS02300
WU04_RS02315	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
WU04_RS02380	SM00363	S4 RNA-binding domain
WU04_RS02385	SM00316	Ribosomal protein S1-like RNA-binding domain
WU04_RS02425	SM00954	Region found in RelA / SpoT proteins
WU04_RS02470	SM00478	endonuclease III
WU04_RS02470	SM00525	WU04_RS02470
WU04_RS02475	SM00382	ATPases associated with a variety of cellular activities
WU04_RS02480	SM00382	ATPases associated with a variety of cellular activities
WU04_RS02510	SM00382	ATPases associated with a variety of cellular activities
WU04_RS02535	SM00382	ATPases associated with a variety of cellular activities
WU04_RS02560	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WU04_RS02560	SM00292	breast cancer carboxy-terminal domain
WU04_RS02560	SM00532	Ligase N family
WU04_RS02565	SM00771	ZipA, C-terminal domain (FtsZ-binding)
WU04_RS02570	SM00968	SMC proteins Flexible Hinge Domain
WU04_RS02580	SM00986	Uracil DNA glycosylase superfamily
WU04_RS02580	SM00987	UreE urease accessory protein, C-terminal domain 
WU04_RS02590	SM00448	cheY-homologous receiver domain
WU04_RS02590	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS02605	SM00387	Histidine kinase-like ATPases
WU04_RS02605	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS02620	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS02635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS02635	SM00895	WU04_RS02635
WU04_RS02640	SM01130	WU04_RS02640
WU04_RS02695	SM00387	Histidine kinase-like ATPases
WU04_RS02695	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS02700	SM00448	cheY-homologous receiver domain
WU04_RS02700	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS02725	SM00411	bacterial (prokaryotic) histone like domain
WU04_RS02730	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
WU04_RS02740	SM00967	RNA 2'-O ribose methyltransferase substrate binding
WU04_RS02745	SM00316	Ribosomal protein S1-like RNA-binding domain
WU04_RS02745	SM00357	Cold shock protein domain
WU04_RS02745	SM00955	WU04_RS02745
WU04_RS02755	SM01144	WU04_RS02755
WU04_RS02790	SM00155	Phospholipase D. Active site motifs.
WU04_RS02835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU04_RS02840	SM00267	diguanylate cyclase
WU04_RS02895	SM00883	Chaperonin 10 Kd subunit
WU04_RS02905	SM00869	Autotransporter beta-domain
WU04_RS02925	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
WU04_RS02965	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS03005	SM00880	WU04_RS03005
WU04_RS03010	SM00382	ATPases associated with a variety of cellular activities
WU04_RS03010	SM00962	SRP54-type protein, GTPase domain
WU04_RS03010	SM00963	SRP54-type protein, helical bundle domain
WU04_RS03045	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU04_RS03075	SM00382	ATPases associated with a variety of cellular activities
WU04_RS03095	SM00919	Malic enzyme, NAD binding domain
WU04_RS03095	SM01274	WU04_RS03095
WU04_RS03115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS03115	SM00895	WU04_RS03115
WU04_RS03195	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS03200	SM00852	Probable molybdopterin binding domain
WU04_RS03220	SM00487	DEAD-like helicases superfamily
WU04_RS03220	SM00490	helicase superfamily c-terminal domain
WU04_RS03295	SM01011	Aminopeptidase P, N-terminal domain
WU04_RS03320	SM00798	AICARFT/IMPCHase bienzyme
WU04_RS03320	SM00851	MGS-like domain
WU04_RS03330	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WU04_RS03345	SM00382	ATPases associated with a variety of cellular activities
WU04_RS03350	SM00341	Helicase and RNase D C-terminal
WU04_RS03350	SM00487	DEAD-like helicases superfamily
WU04_RS03350	SM00490	helicase superfamily c-terminal domain
WU04_RS03350	SM00956	WU04_RS03350
WU04_RS03365	SM00947	Carbonic anhydrase
WU04_RS03390	SM00382	ATPases associated with a variety of cellular activities
WU04_RS03395	SM00382	ATPases associated with a variety of cellular activities
WU04_RS03635	SM00448	cheY-homologous receiver domain
WU04_RS03635	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS03690	SM00382	ATPases associated with a variety of cellular activities
WU04_RS03740	SM00650	Ribosomal RNA adenine dimethylases
WU04_RS03805	SM00382	ATPases associated with a variety of cellular activities
WU04_RS03825	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS03855	SM00867	YceI-like domain 
WU04_RS03860	SM00965	Secretin and TonB N terminus short domain
WU04_RS03885	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS03895	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS03900	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS03905	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
WU04_RS03985	SM00382	ATPases associated with a variety of cellular activities
WU04_RS04005	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS04020	SM00382	ATPases associated with a variety of cellular activities
WU04_RS04050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS04050	SM00895	WU04_RS04050
WU04_RS04055	SM00869	Autotransporter beta-domain
WU04_RS04060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS04060	SM00895	WU04_RS04060
WU04_RS04065	SM00829	Enoylreductase
WU04_RS04085	SM00382	ATPases associated with a variety of cellular activities
WU04_RS04145	SM00487	DEAD-like helicases superfamily
WU04_RS04145	SM00490	helicase superfamily c-terminal domain
WU04_RS04145	SM00982	WU04_RS04145
WU04_RS04145	SM01058	CarD-like/TRCF domain
WU04_RS04230	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
WU04_RS04235	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
WU04_RS04295	SM00014	Acid phosphatase homologues
WU04_RS04355	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS04380	SM00450	Rhodanese Homology Domain
WU04_RS04440	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS04465	SM00829	Enoylreductase
WU04_RS04495	SM00316	Ribosomal protein S1-like RNA-binding domain
WU04_RS04495	SM00322	K homology RNA-binding domain
WU04_RS04500	SM01387	WU04_RS04500
WU04_RS04545	SM00382	ATPases associated with a variety of cellular activities
WU04_RS04625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS04625	SM00866	WU04_RS04625
WU04_RS04630	SM00878	Biotin carboxylase C-terminal domain
WU04_RS04680	SM00382	ATPases associated with a variety of cellular activities
WU04_RS04790	SM00434	DNA Topoisomerase IV
WU04_RS04800	SM00830	Chorismate mutase type II
WU04_RS04820	SM00316	Ribosomal protein S1-like RNA-binding domain
WU04_RS04825	SM00411	bacterial (prokaryotic) histone like domain
WU04_RS04875	SM00893	Electron transfer flavoprotein domain
WU04_RS04880	SM00893	Electron transfer flavoprotein domain
WU04_RS04915	SM00382	ATPases associated with a variety of cellular activities
WU04_RS04930	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU04_RS04980	SM00363	S4 RNA-binding domain
WU04_RS05025	SM00421	helix_turn_helix, Lux Regulon
WU04_RS05025	SM00448	cheY-homologous receiver domain
WU04_RS05030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
WU04_RS05030	SM00091	PAS domain
WU04_RS05030	SM00387	Histidine kinase-like ATPases
WU04_RS05030	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS05065	SM00861	Transketolase, pyrimidine binding domain
WU04_RS05070	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
WU04_RS05125	SM00271	DnaJ molecular chaperone homology domain
WU04_RS05145	SM00852	Probable molybdopterin binding domain
WU04_RS05165	SM00316	Ribosomal protein S1-like RNA-binding domain
WU04_RS05200	SM00448	cheY-homologous receiver domain
WU04_RS05205	SM00073	Histidine Phosphotransfer domain
WU04_RS05205	SM00260	Two component signalling adaptor domain
WU04_RS05205	SM00387	Histidine kinase-like ATPases
WU04_RS05205	SM01231	WU04_RS05205
WU04_RS05210	SM00260	Two component signalling adaptor domain
WU04_RS05215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU04_RS05215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS05225	SM00448	cheY-homologous receiver domain
WU04_RS05230	SM00448	cheY-homologous receiver domain
WU04_RS05270	SM01091	Transporter associated domain
WU04_RS05285	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU04_RS05310	SM01323	WU04_RS05310
WU04_RS05340	SM00869	Autotransporter beta-domain
WU04_RS05390	SM00919	Malic enzyme, NAD binding domain
WU04_RS05390	SM01274	WU04_RS05390
WU04_RS05415	SM00382	ATPases associated with a variety of cellular activities
WU04_RS05460	SM00382	ATPases associated with a variety of cellular activities
WU04_RS05470	SM01103	WU04_RS05470
WU04_RS05510	SM00116	Domain in cystathionine beta-synthase and other proteins.
WU04_RS05530	SM00448	cheY-homologous receiver domain
WU04_RS05530	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS05535	SM00052	Putative diguanylate phosphodiesterase
WU04_RS05535	SM00267	diguanylate cyclase
WU04_RS05535	SM00387	Histidine kinase-like ATPases
WU04_RS05535	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS05545	SM00382	ATPases associated with a variety of cellular activities
WU04_RS05565	SM00382	ATPases associated with a variety of cellular activities
WU04_RS05590	SM00822	WU04_RS05590
WU04_RS05615	SM00382	ATPases associated with a variety of cellular activities
WU04_RS05625	SM00869	Autotransporter beta-domain
WU04_RS05650	SM00849	Metallo-beta-lactamase superfamily
WU04_RS05660	SM00481	DNA polymerase alpha chain like domain
WU04_RS05680	SM00919	Malic enzyme, NAD binding domain
WU04_RS05680	SM01274	WU04_RS05680
WU04_RS05690	SM00344	helix_turn_helix ASNC type
WU04_RS05700	SM00861	Transketolase, pyrimidine binding domain
WU04_RS05765	SM00316	Ribosomal protein S1-like RNA-binding domain
WU04_RS05765	SM00732	Likely ribonuclease with RNase H fold.
WU04_RS05770	SM00491	WU04_RS05770
WU04_RS05780	SM00363	S4 RNA-binding domain
WU04_RS05795	SM00822	WU04_RS05795
WU04_RS05850	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
WU04_RS05860	SM00822	WU04_RS05860
WU04_RS05885	SM01007	Class II Aldolase and Adducin N-terminal domain
WU04_RS05950	SM00382	ATPases associated with a variety of cellular activities
WU04_RS05965	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS06035	SM00100	Cyclic nucleotide-monophosphate binding domain
WU04_RS06035	SM00419	helix_turn_helix, cAMP Regulatory protein
WU04_RS06040	SM00382	ATPases associated with a variety of cellular activities
WU04_RS06040	SM01086	C-terminal, D2-small domain, of ClpB protein
WU04_RS06055	SM00869	Autotransporter beta-domain
WU04_RS06060	SM00869	Autotransporter beta-domain
WU04_RS06125	SM00382	ATPases associated with a variety of cellular activities
WU04_RS06160	SM01005	Alanine racemase, C-terminal domain
WU04_RS06185	SM00327	von Willebrand factor (vWF) type A domain
WU04_RS06190	SM00382	ATPases associated with a variety of cellular activities
WU04_RS06265	SM00833	Cobalamin synthesis protein cobW C-terminal domain
WU04_RS06290	SM00363	S4 RNA-binding domain
WU04_RS06300	SM00316	Ribosomal protein S1-like RNA-binding domain
WU04_RS06340	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
WU04_RS06340	SM00474	3'-5' exonuclease
WU04_RS06340	SM00475	5'-3' exonuclease
WU04_RS06340	SM00482	DNA polymerase A domain
WU04_RS06380	SM00357	Cold shock protein domain
WU04_RS06380	SM00382	ATPases associated with a variety of cellular activities
WU04_RS06380	SM00959	Rho termination factor, N-terminal domain
WU04_RS06390	SM00387	Histidine kinase-like ATPases
WU04_RS06390	SM00433	TopoisomeraseII
WU04_RS06400	SM00434	DNA Topoisomerase IV
WU04_RS06485	SM00382	ATPases associated with a variety of cellular activities
WU04_RS06520	SM00953	WU04_RS06520
WU04_RS06650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS06670	SM00642	Alpha-amylase domain
WU04_RS06680	SM00642	Alpha-amylase domain
WU04_RS06685	SM00642	Alpha-amylase domain
WU04_RS06690	SM00642	Alpha-amylase domain
WU04_RS06695	SM00642	Alpha-amylase domain
WU04_RS06700	SM00642	Alpha-amylase domain
WU04_RS06745	SM00155	Phospholipase D. Active site motifs.
WU04_RS06770	SM00869	Autotransporter beta-domain
WU04_RS06795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS06795	SM00895	WU04_RS06795
WU04_RS06800	SM00881	CoA binding domain
WU04_RS06825	SM00354	helix_turn _helix lactose operon repressor
WU04_RS06845	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
WU04_RS06860	SM00382	ATPases associated with a variety of cellular activities
WU04_RS06870	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS06895	SM00382	ATPases associated with a variety of cellular activities
WU04_RS06895	SM00962	SRP54-type protein, GTPase domain
WU04_RS06910	SM00858	WU04_RS06910
WU04_RS06955	SM00047	Lysozyme subfamily 2
WU04_RS06970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU04_RS06970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS06975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU04_RS06975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS06980	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
WU04_RS06980	SM00091	PAS domain
WU04_RS06980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU04_RS06980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS07045	SM00382	ATPases associated with a variety of cellular activities
WU04_RS07145	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU04_RS07190	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU04_RS07200	SM00935	Outer membrane protein (OmpH-like)
WU04_RS07260	SM00244	prohibitin homologues
WU04_RS07265	SM00267	diguanylate cyclase
WU04_RS07330	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
WU04_RS07335	SM00851	MGS-like domain
WU04_RS07335	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
WU04_RS07345	SM00855	Phosphoglycerate mutase family
WU04_RS07355	SM00382	ATPases associated with a variety of cellular activities
WU04_RS07375	SM00052	Putative diguanylate phosphodiesterase
WU04_RS07395	SM00852	Probable molybdopterin binding domain
WU04_RS07435	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
WU04_RS07470	SM00382	ATPases associated with a variety of cellular activities
WU04_RS07490	SM01329	WU04_RS07490
WU04_RS07495	SM00859	Semialdehyde dehydrogenase, NAD binding domain
WU04_RS07555	SM00644	WU04_RS07555
WU04_RS07590	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
WU04_RS07595	SM00822	WU04_RS07595
WU04_RS07605	SM00825	Beta-ketoacyl synthase
WU04_RS07630	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU04_RS07635	SM00838	Elongation factor G C-terminus
WU04_RS07645	SM00358	Double-stranded RNA binding motif
WU04_RS07645	SM00535	Ribonuclease III family
WU04_RS07805	SM00882	Coenzyme A transferase
WU04_RS07820	SM00382	ATPases associated with a variety of cellular activities
WU04_RS07875	SM01192	WU04_RS07875
WU04_RS07875	SM01193	WU04_RS07875
WU04_RS07885	SM00028	Tetratricopeptide repeats
WU04_RS07885	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS07940	SM00981	WU04_RS07940
WU04_RS07980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS07980	SM00866	WU04_RS07980
WU04_RS08065	SM00382	ATPases associated with a variety of cellular activities
WU04_RS08130	SM00382	ATPases associated with a variety of cellular activities
WU04_RS08130	SM00487	DEAD-like helicases superfamily
WU04_RS08130	SM00490	helicase superfamily c-terminal domain
WU04_RS08130	SM00847	Helicase associated domain (HA2)  Add an annotation
WU04_RS08140	SM00481	DNA polymerase alpha chain like domain
WU04_RS08195	SM00382	ATPases associated with a variety of cellular activities
WU04_RS08215	SM00316	Ribosomal protein S1-like RNA-binding domain
WU04_RS08255	SM00869	Autotransporter beta-domain
WU04_RS08285	SM01209	WU04_RS08285
WU04_RS08285	SM01210	WU04_RS08285
WU04_RS08350	SM00382	ATPases associated with a variety of cellular activities
WU04_RS08370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS08375	SM01329	WU04_RS08375
WU04_RS08395	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU04_RS08410	SM00829	Enoylreductase
WU04_RS08425	SM00450	Rhodanese Homology Domain
WU04_RS08440	SM00382	ATPases associated with a variety of cellular activities
WU04_RS08485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU04_RS08485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS08600	SM00382	ATPases associated with a variety of cellular activities
WU04_RS08670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS08670	SM00331	Sigma factor PP2C-like phosphatases
WU04_RS08670	SM01049	WU04_RS08670
WU04_RS08680	SM01005	Alanine racemase, C-terminal domain
WU04_RS08695	SM00155	Phospholipase D. Active site motifs.
WU04_RS08705	SM00869	Autotransporter beta-domain
WU04_RS08740	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU04_RS08785	SM01207	WU04_RS08785
WU04_RS08800	SM00257	Lysin motif
WU04_RS08825	SM00422	helix_turn_helix, mercury resistance
WU04_RS08880	SM00749	bacterial OsmY and nodulation domain
WU04_RS08945	SM00344	helix_turn_helix ASNC type
WU04_RS08970	SM00904	Riboflavin kinase
WU04_RS09000	SM00965	Secretin and TonB N terminus short domain
WU04_RS09005	SM00382	ATPases associated with a variety of cellular activities
WU04_RS09040	SM00869	Autotransporter beta-domain
WU04_RS09055	SM00357	Cold shock protein domain
WU04_RS09085	SM00382	ATPases associated with a variety of cellular activities
WU04_RS09085	SM00994	ClpX C4-type zinc finger
WU04_RS09085	SM01086	C-terminal, D2-small domain, of ClpB protein
WU04_RS09090	SM00382	ATPases associated with a variety of cellular activities
WU04_RS09090	SM00464	Found in ATP-dependent protease La (LON)
WU04_RS09145	SM00882	Coenzyme A transferase
WU04_RS09150	SM00882	Coenzyme A transferase
WU04_RS09180	SM00869	Autotransporter beta-domain
WU04_RS09195	SM00487	DEAD-like helicases superfamily
WU04_RS09195	SM00490	helicase superfamily c-terminal domain
WU04_RS09200	SM00226	Low molecular weight phosphatase family
WU04_RS09225	SM00271	DnaJ molecular chaperone homology domain
WU04_RS09285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS09285	SM00866	WU04_RS09285
WU04_RS09345	SM00382	ATPases associated with a variety of cellular activities
WU04_RS09395	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WU04_RS09445	SM00387	Histidine kinase-like ATPases
WU04_RS09445	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS09450	SM00448	cheY-homologous receiver domain
WU04_RS09465	SM00562	WU04_RS09465
WU04_RS09495	SM00564	beta-propeller repeat
WU04_RS09500	SM00382	ATPases associated with a variety of cellular activities
WU04_RS09520	SM00244	prohibitin homologues
WU04_RS09525	SM00244	prohibitin homologues
WU04_RS09535	SM00788	Adenylosuccinate synthetase
WU04_RS09550	SM00400	zinc finger
WU04_RS09550	SM00493	WU04_RS09550
WU04_RS09550	SM00766	DNA primase DnaG DnaB-binding
WU04_RS09600	SM00382	ATPases associated with a variety of cellular activities
WU04_RS09705	SM00382	ATPases associated with a variety of cellular activities
WU04_RS09745	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS09765	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU04_RS09780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS09780	SM00895	WU04_RS09780
WU04_RS09800	SM00382	ATPases associated with a variety of cellular activities
WU04_RS09835	SM00464	Found in ATP-dependent protease La (LON)
WU04_RS09845	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS09855	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
WU04_RS09950	SM00822	WU04_RS09950
WU04_RS10120	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WU04_RS10120	SM00465	GIY-YIG type nucleases (URI domain)
WU04_RS10155	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS10175	SM00382	ATPases associated with a variety of cellular activities
WU04_RS10215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS10215	SM00895	WU04_RS10215
WU04_RS10235	SM00382	ATPases associated with a variety of cellular activities
WU04_RS10290	SM00411	bacterial (prokaryotic) histone like domain
WU04_RS10295	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU04_RS10440	SM00479	WU04_RS10440
WU04_RS10500	SM00841	Elongation factor P, C-terminal
WU04_RS10500	SM01185	WU04_RS10500
WU04_RS10530	SM00382	ATPases associated with a variety of cellular activities
WU04_RS10545	SM00028	Tetratricopeptide repeats
WU04_RS10575	SM00858	WU04_RS10575
WU04_RS10620	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU04_RS10625	SM00382	ATPases associated with a variety of cellular activities
WU04_RS10645	SM00318	Staphylococcal nuclease homologues
WU04_RS10665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS10710	SM00421	helix_turn_helix, Lux Regulon
WU04_RS10715	SM00421	helix_turn_helix, Lux Regulon
WU04_RS10720	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU04_RS10735	SM00028	Tetratricopeptide repeats
WU04_RS10760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU04_RS10790	SM00881	CoA binding domain
WU04_RS10795	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS10810	SM00382	ATPases associated with a variety of cellular activities
WU04_RS10925	SM00478	endonuclease III
WU04_RS10930	SM00840	WU04_RS10930
WU04_RS10935	SM00028	Tetratricopeptide repeats
WU04_RS10955	SM01091	Transporter associated domain
WU04_RS10975	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS11070	SM00912	haemagglutination activity domain
WU04_RS11075	SM00421	helix_turn_helix, Lux Regulon
WU04_RS11075	SM00448	cheY-homologous receiver domain
WU04_RS11080	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS11080	SM00073	Histidine Phosphotransfer domain
WU04_RS11080	SM00091	PAS domain
WU04_RS11080	SM00387	Histidine kinase-like ATPases
WU04_RS11080	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS11080	SM00448	cheY-homologous receiver domain
WU04_RS11085	SM00052	Putative diguanylate phosphodiesterase
WU04_RS11130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS11130	SM00895	WU04_RS11130
WU04_RS11170	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
WU04_RS11180	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11190	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS11190	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
WU04_RS11195	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS11200	SM00248	ankyrin repeats
WU04_RS11285	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11290	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11390	SM00822	WU04_RS11390
WU04_RS11405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU04_RS11510	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS11515	SM00869	Autotransporter beta-domain
WU04_RS11520	SM00421	helix_turn_helix, Lux Regulon
WU04_RS11520	SM00448	cheY-homologous receiver domain
WU04_RS11560	SM00028	Tetratricopeptide repeats
WU04_RS11560	SM00327	von Willebrand factor (vWF) type A domain
WU04_RS11565	SM00327	von Willebrand factor (vWF) type A domain
WU04_RS11620	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11625	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11675	SM00984	UDP binding domain
WU04_RS11700	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11745	SM00487	DEAD-like helicases superfamily
WU04_RS11745	SM00490	helicase superfamily c-terminal domain
WU04_RS11790	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11815	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11815	SM00448	cheY-homologous receiver domain
WU04_RS11820	SM00091	PAS domain
WU04_RS11820	SM00387	Histidine kinase-like ATPases
WU04_RS11820	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS11825	SM01230	WU04_RS11825
WU04_RS11830	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU04_RS11845	SM00052	Putative diguanylate phosphodiesterase
WU04_RS11845	SM00267	diguanylate cyclase
WU04_RS11850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
WU04_RS11850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS11885	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS11900	SM00822	WU04_RS11900
WU04_RS11915	SM00072	Guanylate kinase homologues.
WU04_RS11920	SM01409	WU04_RS11920
WU04_RS11925	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU04_RS11925	SM00954	Region found in RelA / SpoT proteins
WU04_RS11930	SM00382	ATPases associated with a variety of cellular activities
WU04_RS11940	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS11940	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
WU04_RS11960	SM01130	WU04_RS11960
WU04_RS11975	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
WU04_RS11980	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
WU04_RS11980	SM00534	ATPase domain of DNA mismatch repair MUTS family
WU04_RS12055	SM00493	WU04_RS12055
WU04_RS12065	SM00382	ATPases associated with a variety of cellular activities
WU04_RS12155	SM00382	ATPases associated with a variety of cellular activities
WU04_RS12165	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS12165	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
WU04_RS12175	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS12180	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS12195	SM01001	AIR carboxylase
WU04_RS12210	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS12240	SM00421	helix_turn_helix, Lux Regulon
WU04_RS12255	SM00834	Putative regulatory protein
WU04_RS12275	SM00382	ATPases associated with a variety of cellular activities
WU04_RS12290	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS12340	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WU04_RS12345	SM00421	helix_turn_helix, Lux Regulon
WU04_RS12345	SM00448	cheY-homologous receiver domain
WU04_RS12365	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
WU04_RS12365	SM00267	diguanylate cyclase
WU04_RS12415	SM01006	Siderophore biosynthesis protein domain
WU04_RS12435	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS12460	SM00267	diguanylate cyclase
WU04_RS12490	SM00382	ATPases associated with a variety of cellular activities
WU04_RS12500	SM00843	WU04_RS12500
WU04_RS12510	SM00463	Small MutS-related domain
WU04_RS12565	SM00448	cheY-homologous receiver domain
WU04_RS12565	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS12585	SM01329	WU04_RS12585
WU04_RS12610	SM00382	ATPases associated with a variety of cellular activities
WU04_RS12635	SM00271	DnaJ molecular chaperone homology domain
WU04_RS12785	SM00240	Forkhead associated domain
WU04_RS12785	SM00382	ATPases associated with a variety of cellular activities
WU04_RS12795	SM00858	WU04_RS12795
WU04_RS12865	SM00881	CoA binding domain
WU04_RS12895	SM00382	ATPases associated with a variety of cellular activities
WU04_RS12900	SM00448	cheY-homologous receiver domain
WU04_RS12900	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS12905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS12905	SM00387	Histidine kinase-like ATPases
WU04_RS12905	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS12920	SM00382	ATPases associated with a variety of cellular activities
WU04_RS12935	SM00822	WU04_RS12935
WU04_RS13045	SM00422	helix_turn_helix, mercury resistance
WU04_RS13050	SM00411	bacterial (prokaryotic) histone like domain
WU04_RS13055	SM00873	B3/4 domain
WU04_RS13055	SM00874	tRNA synthetase B5 domain
WU04_RS13055	SM00896	Ferredoxin-fold anticodon binding domain
WU04_RS13095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS13155	SM00354	helix_turn _helix lactose operon repressor
WU04_RS13160	SM00382	ATPases associated with a variety of cellular activities
WU04_RS13205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS13215	SM00829	Enoylreductase
WU04_RS13235	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS13260	SM00849	Metallo-beta-lactamase superfamily
WU04_RS13260	SM01027	Beta-Casp domain
WU04_RS13305	SM00382	ATPases associated with a variety of cellular activities
WU04_RS13320	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS13345	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS13360	SM00116	Domain in cystathionine beta-synthase and other proteins.
WU04_RS13360	SM01240	WU04_RS13360
WU04_RS13370	SM00869	Autotransporter beta-domain
WU04_RS13410	SM00344	helix_turn_helix ASNC type
WU04_RS13445	SM00382	ATPases associated with a variety of cellular activities
WU04_RS13450	SM00382	ATPases associated with a variety of cellular activities
WU04_RS13455	SM00420	helix_turn_helix, Deoxyribose operon repressor
WU04_RS13455	SM01134	WU04_RS13455
WU04_RS13465	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS13510	SM01130	WU04_RS13510
WU04_RS13515	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS13550	SM01007	Class II Aldolase and Adducin N-terminal domain
WU04_RS13555	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS13560	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU04_RS13575	SM00912	haemagglutination activity domain
WU04_RS13580	SM01211	WU04_RS13580
WU04_RS13680	SM00479	WU04_RS13680
WU04_RS13740	SM00938	Nitrogen regulatory protein P-II
WU04_RS13775	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU04_RS13780	SM00852	Probable molybdopterin binding domain
WU04_RS13785	SM00852	Probable molybdopterin binding domain
WU04_RS13835	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU04_RS13835	SM00876	Biotin and Thiamin Synthesis associated domain
WU04_RS13860	SM00422	helix_turn_helix, mercury resistance
WU04_RS13930	SM00938	Nitrogen regulatory protein P-II
WU04_RS13940	SM00869	Autotransporter beta-domain
WU04_RS13960	SM00382	ATPases associated with a variety of cellular activities
WU04_RS13965	SM00382	ATPases associated with a variety of cellular activities
WU04_RS14010	SM00382	ATPases associated with a variety of cellular activities
WU04_RS14010	SM01086	C-terminal, D2-small domain, of ClpB protein
WU04_RS14020	SM01359	WU04_RS14020
WU04_RS14020	SM01360	WU04_RS14020
WU04_RS14030	SM00357	Cold shock protein domain
WU04_RS14095	SM00822	WU04_RS14095
WU04_RS14180	SM00670	Large family of predicted nucleotide-binding domains
WU04_RS14195	SM00382	ATPases associated with a variety of cellular activities
WU04_RS14230	SM00861	Transketolase, pyrimidine binding domain
WU04_RS14245	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS14270	SM00116	Domain in cystathionine beta-synthase and other proteins.
WU04_RS14270	SM00924	MgtE intracellular N domain
WU04_RS14325	SM00382	ATPases associated with a variety of cellular activities
WU04_RS14325	SM00930	WU04_RS14325
WU04_RS14380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS14380	SM00895	WU04_RS14380
WU04_RS14415	SM00382	ATPases associated with a variety of cellular activities
WU04_RS14445	SM00422	helix_turn_helix, mercury resistance
WU04_RS14470	SM00822	WU04_RS14470
WU04_RS14555	SM00822	WU04_RS14555
WU04_RS14580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU04_RS14605	SM00829	Enoylreductase
WU04_RS14620	SM00382	ATPases associated with a variety of cellular activities
WU04_RS14645	SM00344	helix_turn_helix ASNC type
WU04_RS14690	SM00248	ankyrin repeats
WU04_RS14715	SM00382	ATPases associated with a variety of cellular activities
WU04_RS14750	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS14765	SM00382	ATPases associated with a variety of cellular activities
WU04_RS14805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS14805	SM00895	WU04_RS14805
WU04_RS14875	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
WU04_RS14875	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
WU04_RS14895	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS14930	SM00912	haemagglutination activity domain
WU04_RS14950	SM00528	Domain in histone-like proteins of HNS family
WU04_RS14990	SM00257	Lysin motif
WU04_RS15040	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
WU04_RS15065	SM00448	cheY-homologous receiver domain
WU04_RS15070	SM00387	Histidine kinase-like ATPases
WU04_RS15165	SM00363	S4 RNA-binding domain
WU04_RS15195	SM00859	Semialdehyde dehydrogenase, NAD binding domain
WU04_RS15235	SM00382	ATPases associated with a variety of cellular activities
WU04_RS15255	SM00487	DEAD-like helicases superfamily
WU04_RS15255	SM00490	helicase superfamily c-terminal domain
WU04_RS15265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS15265	SM00895	WU04_RS15265
WU04_RS15300	SM00344	helix_turn_helix ASNC type
WU04_RS15380	SM00878	Biotin carboxylase C-terminal domain
WU04_RS15410	SM00955	WU04_RS15410
WU04_RS15440	SM00344	helix_turn_helix ASNC type
WU04_RS15470	SM00957	SecA DEAD-like domain
WU04_RS15470	SM00958	SecA preprotein cross-linking domain
WU04_RS15490	SM00864	Tubulin/FtsZ family, GTPase domain
WU04_RS15490	SM00865	Tubulin/FtsZ family, C-terminal domain
WU04_RS15495	SM00842	Cell division protein FtsA
WU04_RS15565	SM00382	ATPases associated with a variety of cellular activities
WU04_RS15580	SM00151	SWI complex, BAF60b domains
WU04_RS15615	SM00344	helix_turn_helix ASNC type
WU04_RS15720	SM00382	ATPases associated with a variety of cellular activities
WU04_RS15720	SM01086	C-terminal, D2-small domain, of ClpB protein
WU04_RS15735	SM00833	Cobalamin synthesis protein cobW C-terminal domain
WU04_RS15750	SM00382	ATPases associated with a variety of cellular activities
WU04_RS15820	SM00996	S-adenosyl-L-homocysteine hydrolase
WU04_RS15820	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
WU04_RS15875	SM00487	DEAD-like helicases superfamily
WU04_RS15875	SM00490	helicase superfamily c-terminal domain
WU04_RS15880	SM00986	Uracil DNA glycosylase superfamily
WU04_RS15880	SM00987	UreE urease accessory protein, C-terminal domain 
WU04_RS15895	SM00155	Phospholipase D. Active site motifs.
WU04_RS15900	SM00382	ATPases associated with a variety of cellular activities
WU04_RS15945	SM00344	helix_turn_helix ASNC type
WU04_RS15945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS15990	SM00422	helix_turn_helix, mercury resistance
WU04_RS15990	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS16035	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS16045	SM00869	Autotransporter beta-domain
WU04_RS16150	SM01400	WU04_RS16150
WU04_RS16170	SM00028	Tetratricopeptide repeats
WU04_RS16175	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
WU04_RS16175	SM01232	WU04_RS16175
WU04_RS16180	SM00849	Metallo-beta-lactamase superfamily
WU04_RS16215	SM00387	Histidine kinase-like ATPases
WU04_RS16215	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS16220	SM00448	cheY-homologous receiver domain
WU04_RS16220	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS16280	SM00984	UDP binding domain
WU04_RS16310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS16365	SM00988	UreE urease accessory protein, N-terminal domain
WU04_RS16395	SM00422	helix_turn_helix, mercury resistance
WU04_RS16415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS16415	SM00866	WU04_RS16415
WU04_RS16495	SM00382	ATPases associated with a variety of cellular activities
WU04_RS16500	SM00382	ATPases associated with a variety of cellular activities
WU04_RS16510	SM00822	WU04_RS16510
WU04_RS16595	SM00849	Metallo-beta-lactamase superfamily
WU04_RS16600	SM00257	Lysin motif
WU04_RS16640	SM00448	cheY-homologous receiver domain
WU04_RS16640	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS16645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS16645	SM00387	Histidine kinase-like ATPases
WU04_RS16735	SM00382	ATPases associated with a variety of cellular activities
WU04_RS16770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS16770	SM00866	WU04_RS16770
WU04_RS16795	SM00903	Flavin reductase like domain
WU04_RS16870	SM00925	MltA specific insert domain
WU04_RS16900	SM00905	Dihydroneopterin aldolase
WU04_RS16910	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU04_RS16970	SM00382	ATPases associated with a variety of cellular activities
WU04_RS16990	SM00487	DEAD-like helicases superfamily
WU04_RS16990	SM00490	helicase superfamily c-terminal domain
WU04_RS17015	SM00382	ATPases associated with a variety of cellular activities
WU04_RS17130	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS17170	SM00155	Phospholipase D. Active site motifs.
WU04_RS17190	SM00834	Putative regulatory protein
WU04_RS17220	SM00116	Domain in cystathionine beta-synthase and other proteins.
WU04_RS17240	SM00382	ATPases associated with a variety of cellular activities
WU04_RS17295	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
WU04_RS17300	SM01092	CO dehydrogenase flavoprotein C-terminal domain
WU04_RS17330	SM00937	WU04_RS17330
WU04_RS17365	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS17375	SM00881	CoA binding domain
WU04_RS17400	SM00344	helix_turn_helix ASNC type
WU04_RS17430	SM00881	CoA binding domain
WU04_RS17440	SM00829	Enoylreductase
WU04_RS17545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
WU04_RS17545	SM00387	Histidine kinase-like ATPases
WU04_RS17545	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS17550	SM00448	cheY-homologous receiver domain
WU04_RS17565	SM00347	helix_turn_helix multiple antibiotic resistance protein
WU04_RS17630	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
WU04_RS17650	SM00382	ATPases associated with a variety of cellular activities
WU04_RS17710	SM00450	Rhodanese Homology Domain
WU04_RS17715	SM00855	Phosphoglycerate mutase family
WU04_RS17725	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WU04_RS17725	SM00245	tail specific protease
WU04_RS17745	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS17775	SM00382	ATPases associated with a variety of cellular activities
WU04_RS17780	SM00382	ATPases associated with a variety of cellular activities
WU04_RS17820	SM00861	Transketolase, pyrimidine binding domain
WU04_RS17830	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS17835	SM00881	CoA binding domain
WU04_RS17895	SM01130	WU04_RS17895
WU04_RS17935	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS17955	SM00344	helix_turn_helix ASNC type
WU04_RS18010	SM00729	Elongator protein 3, MiaB family, Radical SAM
WU04_RS18030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS18030	SM00895	WU04_RS18030
WU04_RS18075	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS18095	SM00869	Autotransporter beta-domain
WU04_RS18125	SM01119	WU04_RS18125
WU04_RS18135	SM00244	prohibitin homologues
WU04_RS18230	SM00387	Histidine kinase-like ATPases
WU04_RS18230	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS18265	SM01234	WU04_RS18265
WU04_RS18280	SM00382	ATPases associated with a variety of cellular activities
WU04_RS18280	SM00760	Bacterial dnaA protein helix-turn-helix domain
WU04_RS18285	SM00480	DNA polymerase III beta subunit
WU04_RS18290	SM00387	Histidine kinase-like ATPases
WU04_RS18290	SM00433	TopoisomeraseII
WU04_RS18295	SM00346	helix_turn_helix isocitrate lyase regulation
WU04_RS18320	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS18320	SM00871	Bacterial transcription activator, effector binding domain
WU04_RS18345	SM00422	helix_turn_helix, mercury resistance
WU04_RS18350	SM00849	Metallo-beta-lactamase superfamily
WU04_RS18380	SM00878	Biotin carboxylase C-terminal domain
WU04_RS18380	SM01209	WU04_RS18380
WU04_RS18400	SM01119	WU04_RS18400
WU04_RS18435	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
WU04_RS18435	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
WU04_RS18435	SM00493	WU04_RS18435
WU04_RS18445	SM00382	ATPases associated with a variety of cellular activities
WU04_RS18475	SM00344	helix_turn_helix ASNC type
WU04_RS18485	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
WU04_RS18505	SM01018	B12 binding domain
WU04_RS18585	SM00838	Elongation factor G C-terminus
WU04_RS18585	SM00889	Elongation factor G, domain IV
WU04_RS18595	SM01403	WU04_RS18595
WU04_RS18615	SM01382	WU04_RS18615
WU04_RS18615	SM01383	WU04_RS18615
WU04_RS18630	SM00322	K homology RNA-binding domain
WU04_RS18665	SM01374	WU04_RS18665
WU04_RS18740	SM00363	S4 RNA-binding domain
WU04_RS18740	SM01390	WU04_RS18740
WU04_RS18745	SM00662	RNA polymerases D
WU04_RS18775	SM01004	Delta-aminolevulinic acid dehydratase
WU04_RS18810	SM01219	WU04_RS18810
WU04_RS18830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WU04_RS18880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS18880	SM00866	WU04_RS18880
WU04_RS18925	SM00382	ATPases associated with a variety of cellular activities
WU04_RS18950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS18950	SM00895	WU04_RS18950
WU04_RS18980	SM01130	WU04_RS18980
WU04_RS18995	SM00257	Lysin motif
WU04_RS19050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS19060	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS19065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
WU04_RS19080	SM00382	ATPases associated with a variety of cellular activities
WU04_RS19095	SM00829	Enoylreductase
WU04_RS19145	SM00382	ATPases associated with a variety of cellular activities
WU04_RS19195	SM00984	UDP binding domain
WU04_RS19285	SM00100	Cyclic nucleotide-monophosphate binding domain
WU04_RS19310	SM00829	Enoylreductase
WU04_RS19340	SM00382	ATPases associated with a variety of cellular activities
WU04_RS19450	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS19540	SM00342	helix_turn_helix, arabinose operon control protein
WU04_RS19655	SM00421	helix_turn_helix, Lux Regulon
WU04_RS19695	SM00382	ATPases associated with a variety of cellular activities
WU04_RS19710	SM00062	Bacterial periplasmic substrate-binding proteins
WU04_RS19715	SM00382	ATPases associated with a variety of cellular activities
WU04_RS19735	SM00478	endonuclease III
WU04_RS19740	SM00530	Helix-turn-helix XRE-family like proteins 
WU04_RS19815	SM01060	WU04_RS19815
WU04_RS19825	SM00382	ATPases associated with a variety of cellular activities
WU04_RS19845	SM00382	ATPases associated with a variety of cellular activities
WU04_RS19850	SM00382	ATPases associated with a variety of cellular activities
WU04_RS19880	SM00448	cheY-homologous receiver domain
WU04_RS19880	SM00862	Transcriptional regulatory protein, C terminal
WU04_RS19885	SM00387	Histidine kinase-like ATPases
WU04_RS19885	SM00388	His Kinase A (phosphoacceptor) domain
WU04_RS19910	SM00357	Cold shock protein domain
